BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000174
         (1931 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score = 3202 bits (8303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1585/1988 (79%), Positives = 1736/1988 (87%), Gaps = 74/1988 (3%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDILID-EFVNFDTSVVQDSVDNTSNQDSLSNDF 59
            MEGE     ++  G S   +YWLDACEDI  D +F  F++++V +S D  SN D +  DF
Sbjct: 1    MEGE-----MMNKGVSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGV-GDF 54

Query: 60   FGGIDHILDSIKNGSGL-----------PNSNGNLLKNGSED-STGGEN---HQAEGLIL 104
            FGGID ILDSIKNG+GL           P+   +     +E+ + G  N   H + G+  
Sbjct: 55   FGGIDRILDSIKNGTGLTPVVDEGTTGIPDCAVSQTWFQTENVAVGASNLQLHHSFGVSD 114

Query: 105  LSNNGSDKDGVDRKRKLENC---ENVNGYL-VNGKAGGRLSDHFTKENGVHRDNGNNDHE 160
            +S N  D +G  R+   + C   E  NG + ++GKA  +L  H  K NGV + + N  ++
Sbjct: 115  VSPN--DTNGTKRRSDDDGCQFHEADNGKMSLDGKAESKLV-HSPKGNGVKK-HENRPND 170

Query: 161  ASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRD 220
            ASR RDFD ++R+SKRAR+   KN+  YS+RGQY    ++R   RKR R+ ++  RRD D
Sbjct: 171  ASRDRDFDDQERYSKRARLGDSKNDRHYSTRGQY--QPRERSSCRKRSRNWEEFDRRDGD 228

Query: 221  PMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANG 280
             +RR+EHY   SR++ RD+++RDRE +GYWERDRLGS  M+F LGSWEA+ NR GK    
Sbjct: 229  QIRRKEHYG--SRRESRDREWRDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAE 286

Query: 281  INQECNGKVGKK--SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLI 338
             NQECNG V ++   E KEK+PEEQAR YQLDVLEQAKK+NTIAFLETGAGKTLIAVLLI
Sbjct: 287  KNQECNGSVTERRLEEPKEKLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLI 346

Query: 339  RSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQR 398
            RS+ NDLQ QNKK+LAVFLVPKVPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA+RWQR
Sbjct: 347  RSVFNDLQGQNKKLLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQR 406

Query: 399  EFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE 458
            EF+TK VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT KE
Sbjct: 407  EFETKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKE 466

Query: 459  KRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV 518
            KRPSVFGMTASPVNLKGVSSQVDCAIKI NLESKLDS+VCTIKDRKELEKHVPMPSE+VV
Sbjct: 467  KRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVV 526

Query: 519  EYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE 578
            EYDKAA+LWSLHEQ+KQME+AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE
Sbjct: 527  EYDKAATLWSLHEQIKQMELAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE 586

Query: 579  SDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVV 638
            SDGAANLIQKLRAINYALGELGQWCA+KVAQSFLTALQNDERANYQLDVKFQESYL+KVV
Sbjct: 587  SDGAANLIQKLRAINYALGELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVV 646

Query: 639  SLLQCELVEGAVSKKDAKVVDSENGFVEGGT--NEIEEGELLDSHVVSGGEHVDVIIGAA 696
            SLLQC+L EGAVS KD KVVD+E      G+   EIEEGEL +SHVVSGGEHVDVIIGAA
Sbjct: 647  SLLQCQLSEGAVSDKDKKVVDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAA 706

Query: 697  VADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
            VADGKVTPKVQSL+KILLKYQ TEDFRAIIFVERVVAALVLPKVFAELPSLSF+K ASLI
Sbjct: 707  VADGKVTPKVQSLVKILLKYQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLI 766

Query: 757  GHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
            GHNNSQEMRT QMQ+TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ
Sbjct: 767  GHNNSQEMRTCQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 826

Query: 817  SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            SRGRARKPGSDYILM+ERGNLSH  FLRNARNSEETLRKEAIERTDLSHLK TSRLISVD
Sbjct: 827  SRGRARKPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVD 886

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
              PGTVYQVESTGA+VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC
Sbjct: 887  TTPGTVYQVESTGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 946

Query: 937  KLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            KLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE+ EKVD
Sbjct: 947  KLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVD 1006

Query: 997  QNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISK 1056
            QNDEG+PLPGTARHREFYPEGVA++LQGEWIL G+DGC  S+L HL+MY VKCVN G SK
Sbjct: 1007 QNDEGDPLPGTARHREFYPEGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSK 1066

Query: 1057 DPFLTQVSDFAVLFSSELDAE--------------------------------LASLKNF 1084
            DPFLTQVSDF VLF +ELDAE                                LASLK+F
Sbjct: 1067 DPFLTQVSDFVVLFGNELDAEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSF 1126

Query: 1085 HVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNP 1144
            HVRLMSIVLDVDVEP TTPWDPAKAYLFVPVV DKS DP+ ++DWD+VE+I +TD W+NP
Sbjct: 1127 HVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNP 1186

Query: 1145 LQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGL 1204
            LQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGA+AQ+DVV+ASGL
Sbjct: 1187 LQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGL 1246

Query: 1205 VPDREAMQIHNA-DMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESS 1263
            VP+RE +++    D+  GKLMMA +  +A DL GRIVTAAHSGKRFYV+S+RY+MTAE+S
Sbjct: 1247 VPNRETIEMMKGEDLTKGKLMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENS 1306

Query: 1264 FPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEG 1323
            FPRKEGYLGPLEYSSYADYY+QKYGVELI+K+QPLIRGRGVSYCKNLLSPRFEHSE   G
Sbjct: 1307 FPRKEGYLGPLEYSSYADYYRQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHSE---G 1363

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP 1383
            E +E LDKTYYVFLPPELCF+HPLPGSLVR AQRLPSIMRRVESMLLA+QLKD INYPVP
Sbjct: 1364 ESDETLDKTYYVFLPPELCFVHPLPGSLVRSAQRLPSIMRRVESMLLAVQLKDVINYPVP 1423

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            A+KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN
Sbjct: 1424 AAKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1483

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
            +VLYQ AL KGLQSYIQADRFAPSRWAAPGVLPVFDEDTK+ +SSLFD E+  +E   G 
Sbjct: 1484 MVLYQSALCKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKETESSLFDHERPFSETAPGN 1543

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
            D++ + Y+DD+MEDGELE DSSSYRVLSSKTLADVVEALIGVYYVEGGK+AANHLMKWIG
Sbjct: 1544 DRHGDGYDDDEMEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIG 1603

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV 1623
            IQVE DPE++ C + P  VPES+LRSV+F  LE AL IKF +RGLL+EAITHASRPSSGV
Sbjct: 1604 IQVEFDPEDIVCATGPCNVPESILRSVNFDTLEGALNIKFNNRGLLIEAITHASRPSSGV 1663

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
            SCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLH+HL
Sbjct: 1664 SCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHIHL 1723

Query: 1684 RHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT 1743
            RHGSSAL++QIRDFVKEV +EL KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT
Sbjct: 1724 RHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT 1783

Query: 1744 SVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ 1803
            +VVW+VFQPLL PMVTPETLPMHPVRELQERCQQQAEGLEYKA+RSGNLATVEV+IDGVQ
Sbjct: 1784 AVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQ 1843

Query: 1804 VGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICL 1863
            +G+AQNPQKKMAQKLAARNAL VLKE+ETAEAKE  DENGKK+KNG+QTFTRQTLNDICL
Sbjct: 1844 IGIAQNPQKKMAQKLAARNALVVLKERETAEAKEGDDENGKKKKNGSQTFTRQTLNDICL 1903

Query: 1864 RRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
            RRNWPMP+YRCV EGGPAHAKRFT+AVRVNT DKGWTDEC+GEPMPSVKKAKDSAAVLLL
Sbjct: 1904 RRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGEPMPSVKKAKDSAAVLLL 1963

Query: 1924 ELLNKWYS 1931
            ELLNKWY+
Sbjct: 1964 ELLNKWYT 1971


>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score = 3109 bits (8060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1566/1996 (78%), Positives = 1710/1996 (85%), Gaps = 75/1996 (3%)

Query: 1    MEGETRVSDIVGGGESNQ-------SSYWLDACEDIL--IDEFVNFDTSVVQ-DSVDNTS 50
            ME ETRV     G  S++       SS+WLDACEDI   I++FV+F  S+    SVD+TS
Sbjct: 1    MEDETRVP----GSFSSEPACSLGVSSFWLDACEDIPCDINDFVDFQASITPGSSVDHTS 56

Query: 51   NQDSLSNDFFGGIDHILDSIKNGSGLP--NSNGN---LLKNG---SEDSTGGENHQAEGL 102
            +Q +LSNDFFGGIDH LDSIKNG  L     NG+    ++ G     D++G  +   +  
Sbjct: 57   DQQNLSNDFFGGIDHFLDSIKNGGSLSPVTCNGDRDCTVREGFFIENDASGVRDMPVDSS 116

Query: 103  ILLSN---------NGSDKDGVDRKRKL-ENCENVNGYLV-NGKAGGRLSDHFTKENGVH 151
             + SN         NG  KD +D    + E  E+VNG+   NG  G R+ +   K NGV 
Sbjct: 117  TVQSNGAQIEILQCNGLSKDNLDNGSHICERYESVNGFQSPNGCEGLRVVET-PKRNGVK 175

Query: 152  RDNGNNDHEASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYCSSDKDRVFGRKRLRDL 211
            +    ND  + R    D+E+R +KR R+S   NE  YS+RGQ  S D+++   RKRLRD 
Sbjct: 176  KHERTND-TSLRGWGCDNEERSNKRPRISNGNNERYYSNRGQCLSRDREKFHTRKRLRDR 234

Query: 212  DDIGRRDRDPMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADH 271
            D+I RR+R   RRREHY G+  KD RD+D R+RE +GYWERD+ GSN MVF  G WEAD 
Sbjct: 235  DEIDRRERSYFRRREHY-GTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADR 293

Query: 272  NRAGKEANGINQECNGKVGKKS-EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGK 330
            NR     N  N E  G   K S E KEK+PEEQAR YQLDVLEQAKKKNTIAFLETGAGK
Sbjct: 294  NRDAMTDNDKNLEFQGTADKSSKEIKEKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGK 353

Query: 331  TLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDF 390
            TLIAVLLI+SI NDLQ QNKKMLAVFLVPKVPLVYQQAEVIRE+TGY VGHYCGEMGQDF
Sbjct: 354  TLIAVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDF 413

Query: 391  WDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 450
            WDA+RWQREF+TKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE
Sbjct: 414  WDARRWQREFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 473

Query: 451  FYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHV 510
            FYHTT KE+RPSVFGMTASPVNLKGVS+Q+DCAIKI NLESKLDS VCTIKDRKELEKHV
Sbjct: 474  FYHTTPKERRPSVFGMTASPVNLKGVSNQIDCAIKIRNLESKLDSTVCTIKDRKELEKHV 533

Query: 511  PMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQV 570
            PMPSEVVVEYDKAA+LWSLHE +KQ+EV VEEAA+ SSRRSKWQ MGARDAGA+EELRQV
Sbjct: 534  PMPSEVVVEYDKAATLWSLHELIKQIEVEVEEAAKLSSRRSKWQLMGARDAGAREELRQV 593

Query: 571  YGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
            YGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ
Sbjct: 594  YGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 653

Query: 631  ESYLSKVVSLLQCELVEGAVSKKD--AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEH 688
            ESYL+KVV+LLQC+L EGAVS KD  A V + +        +EIEEGELLDSHVVSGGEH
Sbjct: 654  ESYLNKVVALLQCQLSEGAVSDKDGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEH 713

Query: 689  VDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS 748
            VD IIGAAVADGKVTPKVQSL+KILLKYQ+TEDFRAIIFVERVV+ALVLPKVFAELPSLS
Sbjct: 714  VDEIIGAAVADGKVTPKVQSLVKILLKYQYTEDFRAIIFVERVVSALVLPKVFAELPSLS 773

Query: 749  FVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
            F+KSASLIGHNNSQ+MRT QMQ+TI+KFRDGRVTLLVATSVAEEGLDIRQCNVV+RFDLA
Sbjct: 774  FIKSASLIGHNNSQDMRTCQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLA 833

Query: 809  KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
            KTVLAYIQSRGRARKPGSDYILM+ERGNLSHA FLRNARNSEETLRKEA+ERTDLSHL+D
Sbjct: 834  KTVLAYIQSRGRARKPGSDYILMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLED 893

Query: 869  TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
            TSRLIS+D  P TVYQVESTGAVVSLNSAVGL+HFYCSQLPSDRYSILRPEF+M RHEKP
Sbjct: 894  TSRLISMDTTPDTVYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKP 953

Query: 929  GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
            GGPTEYSCKLQLPCNAPFE LEGP+CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS
Sbjct: 954  GGPTEYSCKLQLPCNAPFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 1013

Query: 989  GEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVK 1048
            GE++EKV+QND+G+PLPGTARHREFYPEGVA+ILQGEWIL+GRD  + SK  HL+MYTV+
Sbjct: 1014 GEEKEKVEQNDDGDPLPGTARHREFYPEGVANILQGEWILTGRDTFSDSKFLHLYMYTVQ 1073

Query: 1049 CVNNGISKDPFLTQVSDFAVLFSSELDAE------------------------------- 1077
            CVN G SKD FLTQVS+FAVLF SELDAE                               
Sbjct: 1074 CVNVGSSKDLFLTQVSNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITES 1133

Query: 1078 -LASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKIT 1136
             LASLK+FHVRLMSIVLDVDVEP TTPWDPAKAYLFVPVV DKS DP+ E+DW +V +I 
Sbjct: 1134 QLASLKSFHVRLMSIVLDVDVEPTTTPWDPAKAYLFVPVVGDKSEDPVKEIDWVMVRRII 1193

Query: 1137 KTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQF 1196
            +TDAW NPLQRARPDVYLGTNER LGGDRREYGFGKLRHGMAFGQKSHPTYGIRGA+AQF
Sbjct: 1194 QTDAWNNPLQRARPDVYLGTNERALGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQF 1253

Query: 1197 DVVKASGLVPDREAMQIH-NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIR 1255
            DVVKASGLVPDR  +++  + D P GKL+MAD+     DL GRIVTAAHSGKRFYV+SIR
Sbjct: 1254 DVVKASGLVPDRGDVELQRHPDQPKGKLLMADTSMAVEDLVGRIVTAAHSGKRFYVDSIR 1313

Query: 1256 YEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRF 1315
            Y+ TAE+SFPRKEGYLGPLEYSSYADYYKQKYGVEL++K QPLIRGRGVSYCKNLLSPRF
Sbjct: 1314 YDTTAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPLIRGRGVSYCKNLLSPRF 1373

Query: 1316 EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK 1375
            EH+   E E EE LDKTYYV+LPPELC +HPLPGSLVRGAQRLPSIMRRVESMLLAIQLK
Sbjct: 1374 EHA---ENESEETLDKTYYVYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK 1430

Query: 1376 DKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
              INYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP+KHEGQLTR
Sbjct: 1431 HMINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRKHEGQLTR 1490

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKS 1495
            MRQQMVSN+VLYQYALSK LQSYIQADRFAPSRWAAPGVLPV+DED KDG+SS FDQ+KS
Sbjct: 1491 MRQQMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPGVLPVYDEDMKDGESSFFDQDKS 1550

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA 1555
             ++     D + + +ED ++ED E+E DSSSYRVLSSKTLADVVEALIGVYYVEGGK AA
Sbjct: 1551 NSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSKTLADVVEALIGVYYVEGGKTAA 1610

Query: 1556 NHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITH 1615
            NHLMKWIGI+VE D  EV C +R + +PES+LRSVDF ALE AL IKF+DRGLLVEAITH
Sbjct: 1611 NHLMKWIGIKVEFDAGEVECGTRQSNLPESILRSVDFDALEGALNIKFQDRGLLVEAITH 1670

Query: 1616 ASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
            ASRPS GVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAV
Sbjct: 1671 ASRPSCGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAV 1730

Query: 1676 KHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1735
            KH LH+HLRHGSSAL++QIRDFVKEV +ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI
Sbjct: 1731 KHNLHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1790

Query: 1736 FLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV 1795
            FLDSGRDT+VVW+VFQPLL PMVTPETLPMHPVRELQERCQQQAEGLEYKA+R GNLATV
Sbjct: 1791 FLDSGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLATV 1850

Query: 1796 EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTR 1855
            EV+IDGVQ+G+AQNPQKKMAQKLAARNALAVLKEKE  +AKEK ++NGKK+KNG QTFTR
Sbjct: 1851 EVFIDGVQIGIAQNPQKKMAQKLAARNALAVLKEKEMDDAKEKIEDNGKKKKNGNQTFTR 1910

Query: 1856 QTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAK 1915
            QTLNDICLRRNWPMP YRCV EGGPAHAKRFT+AVRVNTTDKGWTDECVGEPMPSVKKAK
Sbjct: 1911 QTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAK 1970

Query: 1916 DSAAVLLLELLNKWYS 1931
            DSAAVLLLELLNK YS
Sbjct: 1971 DSAAVLLLELLNKLYS 1986


>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
            [Cucumis sativus]
          Length = 1987

 Score = 3105 bits (8050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1561/1993 (78%), Positives = 1705/1993 (85%), Gaps = 68/1993 (3%)

Query: 1    MEGETRVSDIVGGGESNQ---SSYWLDACEDIL--IDEFVNFDTSVVQ-DSVDNTSNQDS 54
            ME ETRV        +     SS+WLDACEDI   I++FV+F  S+    SVD+TS+Q +
Sbjct: 1    MEDETRVPGSFSSEPACSLGVSSFWLDACEDIPCDINDFVDFQASITPGSSVDHTSDQQN 60

Query: 55   LSNDFFGGIDHILDSIKNGSGLP--NSNGN---LLKNG---SEDSTGGENHQAEGLILLS 106
            LSNDFFGGIDH LDSIKNG  L     NG+    ++ G     D++G  +   +   + S
Sbjct: 61   LSNDFFGGIDHFLDSIKNGGSLSPVTCNGDRDCTVREGFFIENDASGVRDMPVDSSTVQS 120

Query: 107  N---------NGSDKDGVDRKRKL-ENCENVNGYLV-NGKAGGRLSDHFTKENGVHRDNG 155
            N         NG  KD +D    + E  E+VNG+   NG  G R+ +   K NGV +   
Sbjct: 121  NGAQIEILQCNGLSKDNLDNGSHICERYESVNGFQSPNGCEGLRVVET-PKRNGVKKHER 179

Query: 156  NNDHEASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYCSSDKDRVFGRKRLRDLDDIG 215
             ND  + R    D+E+R +KR R+S   NE  YS+RGQ  S D+++   RKRLRD D+I 
Sbjct: 180  TND-TSLRGWGCDNEERSNKRPRISNGNNERYYSNRGQCLSRDREKFHTRKRLRDRDEID 238

Query: 216  RRDRDPMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAG 275
            RR+R   RRREHY G+  KD RD+D R+RE +GYWERD+ GSN MVF  G WEAD NR  
Sbjct: 239  RRERSYFRRREHY-GTGGKDARDRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNRDA 297

Query: 276  KEANGINQECNGKVGKKS--EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLI 333
               N  N E  G   K      K+K+PEEQAR YQLDVLEQAKKKNTIAFLETGAGKTLI
Sbjct: 298  MTDNDKNLEFQGTADKSXPRRLKKKLPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLI 357

Query: 334  AVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDA 393
            AVLLI+SI NDLQ QNKKMLAVFLVPKVPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA
Sbjct: 358  AVLLIKSIYNDLQTQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDA 417

Query: 394  QRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH 453
            +RWQREF+TKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH
Sbjct: 418  RRWQREFETKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH 477

Query: 454  TTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMP 513
            TT KE+RPSVFGMTASPVNLKGVS+Q+DCAIKI NLESKLDS VCTIKDRKELEKHVPMP
Sbjct: 478  TTPKERRPSVFGMTASPVNLKGVSNQIDCAIKIRNLESKLDSTVCTIKDRKELEKHVPMP 537

Query: 514  SEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV 573
            SEVVVEYDKAA+LWSLHE +KQ+EV VEEAA+ SSRRSKWQ MGARDAGA+EELRQVYGV
Sbjct: 538  SEVVVEYDKAATLWSLHELIKQIEVEVEEAAKLSSRRSKWQLMGARDAGAREELRQVYGV 597

Query: 574  SERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 633
            SERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY
Sbjct: 598  SERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 657

Query: 634  LSKVVSLLQCELVEGAVSKKD--AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDV 691
            L+KVV+LLQC+L EGAVS KD  A V + +        +EIEEGELLDSHVVSGGEHVD 
Sbjct: 658  LNKVVALLQCQLSEGAVSDKDGIASVSEEDVANTRSNLDEIEEGELLDSHVVSGGEHVDE 717

Query: 692  IIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK 751
            IIGAAVADGKVTPKVQSL+KILLKYQ+TEDFRAIIFVERVV+ALVLPKVFAELPSLSF+K
Sbjct: 718  IIGAAVADGKVTPKVQSLVKILLKYQYTEDFRAIIFVERVVSALVLPKVFAELPSLSFIK 777

Query: 752  SASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
            SASLIGHNNSQ+MRT QMQ+TI+KFRDGRVTLLVATSVAEEGLDIRQCNVV+RFDLAKTV
Sbjct: 778  SASLIGHNNSQDMRTCQMQDTISKFRDGRVTLLVATSVAEEGLDIRQCNVVMRFDLAKTV 837

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSR 871
            LAYIQSRGRARKPGSDYILM+ERGNLSHA FLRNARNSEETLRKEA+ERTDLSHL+DTSR
Sbjct: 838  LAYIQSRGRARKPGSDYILMVERGNLSHAAFLRNARNSEETLRKEAVERTDLSHLEDTSR 897

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
            LIS+D  P TVYQVESTGAVVSLNSAVGL+HFYCSQLPSDRYSILRPEF+M RHEKPGGP
Sbjct: 898  LISMDTTPDTVYQVESTGAVVSLNSAVGLVHFYCSQLPSDRYSILRPEFVMVRHEKPGGP 957

Query: 932  TEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQ 991
            TEYSCKLQLPCNAPFE LEGP+CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE+
Sbjct: 958  TEYSCKLQLPCNAPFEDLEGPICSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEE 1017

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVN 1051
            +EKV+QND+G+PLPGTARHREFYPEGVA+ILQGEWIL+GRD  + SK  HL+MYTV+CVN
Sbjct: 1018 KEKVEQNDDGDPLPGTARHREFYPEGVANILQGEWILTGRDTFSDSKFLHLYMYTVQCVN 1077

Query: 1052 NGISKDPFLTQVSDFAVLFSSELDAE--------------------------------LA 1079
             G SKD FLTQVS+FAVLF SELDAE                                LA
Sbjct: 1078 VGSSKDLFLTQVSNFAVLFGSELDAEVLSMSMDLFIARTITTKASLVFRGLCDITESQLA 1137

Query: 1080 SLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTD 1139
            SLK+FHVRLMSIVLDVDVEP TTPWDPAKAYLFVPVV DKS DP+ E+DW +V +I +TD
Sbjct: 1138 SLKSFHVRLMSIVLDVDVEPTTTPWDPAKAYLFVPVVGDKSEDPVKEIDWVMVRRIIQTD 1197

Query: 1140 AWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVV 1199
            AW NPLQRARPDVYLGTNER LGGDRREYGFGKLRHGMAFGQKSHPTYGIRGA+AQFDVV
Sbjct: 1198 AWNNPLQRARPDVYLGTNERALGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVV 1257

Query: 1200 KASGLVPDREAMQIH-NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEM 1258
            KASGLVPDR  +++  + D P GKL+MAD+     DL GRIVTAAHSGKRFYV+SIRY+ 
Sbjct: 1258 KASGLVPDRGDVELQRHPDQPKGKLLMADTSMAVEDLVGRIVTAAHSGKRFYVDSIRYDT 1317

Query: 1259 TAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
            TAE+SFPRKEGYLGPLEYSSYADYYKQKYGVEL++K QPLIRGRGVSYCKNLLSPRFEH+
Sbjct: 1318 TAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYKHQPLIRGRGVSYCKNLLSPRFEHA 1377

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
               E E EE LDKTYYV+LPPELC +HPLPGSLVRGAQRLPSIMRRVESMLLAIQLK  I
Sbjct: 1378 ---ENESEETLDKTYYVYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKHMI 1434

Query: 1379 NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP+KHEGQLTRMRQ
Sbjct: 1435 NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRKHEGQLTRMRQ 1494

Query: 1439 QMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAE 1498
            QMVSN+VLYQYALSK LQSYIQADRFAPSRWAAPGVLPV+DED KDG+SS FDQ+KS ++
Sbjct: 1495 QMVSNMVLYQYALSKKLQSYIQADRFAPSRWAAPGVLPVYDEDMKDGESSFFDQDKSNSD 1554

Query: 1499 DKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL 1558
                 D + + +ED ++ED E+E DSSSYRVLSSKTLADVVEALIGVYYVEGGK AANHL
Sbjct: 1555 GVSEMDLHLDVFEDGEVEDREVESDSSSYRVLSSKTLADVVEALIGVYYVEGGKTAANHL 1614

Query: 1559 MKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
            MKWIGI+VE D  EV C +R + +PES+LRSVDF ALE AL IKF+DRGLLVEAITHASR
Sbjct: 1615 MKWIGIKVEFDAGEVECGTRQSNLPESILRSVDFDALEGALNIKFQDRGLLVEAITHASR 1674

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
            PS GVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKH 
Sbjct: 1675 PSCGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHN 1734

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1738
            LH+HLRHGSSAL++QIRDFVKEV +ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD
Sbjct: 1735 LHIHLRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1794

Query: 1739 SGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVY 1798
            SGRDT+VVW+VFQPLL PMVTPETLPMHPVRELQERCQQQAEGLEYKA+R GNLATVEV+
Sbjct: 1795 SGRDTAVVWRVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLATVEVF 1854

Query: 1799 IDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTL 1858
            IDGVQ+G+AQNPQKKMAQKLAARNALAVLKEKE  +AKEK ++NGKK+KNG QTFTRQTL
Sbjct: 1855 IDGVQIGIAQNPQKKMAQKLAARNALAVLKEKEMDDAKEKXEDNGKKKKNGNQTFTRQTL 1914

Query: 1859 NDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSA 1918
            NDICLRRNWPMP YRCV EGGPAHAKRFT+AVRVNTTDKGWTDECVGEPMPSVKKAKDSA
Sbjct: 1915 NDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGEPMPSVKKAKDSA 1974

Query: 1919 AVLLLELLNKWYS 1931
            AVLLLELLNK YS
Sbjct: 1975 AVLLLELLNKLYS 1987


>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score = 3066 bits (7948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1562/1957 (79%), Positives = 1688/1957 (86%), Gaps = 73/1957 (3%)

Query: 20   SYWLDACEDILIDEFVNFDTS--VVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNGSGLP 77
            SYWLDACEDI  D+F++FD S  VV D  DN SNQD     FFGGID ILDSIKNG+GLP
Sbjct: 14   SYWLDACEDISCDDFIDFDVSSIVVSDQPDNPSNQD-----FFGGIDKILDSIKNGAGLP 68

Query: 78   --NSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVDRKRKLENCENVNGYLVNGK 135
              ++      N +  ++GG        + L +N + +D  D         N +    NG 
Sbjct: 69   LNHAAAEPPSNVTAAASGGAE------VCLPSNATPEDSFDHSGGAA-LSNGSSKQSNGN 121

Query: 136  AGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYC 195
              G L D +++E G    NG          DFD E+R SKRAR+    N+  Y  RG Y 
Sbjct: 122  ETGVLVD-YSQERGTPTLNGG--------LDFDGEERCSKRARLGGYNNDRPYHGRGNYQ 172

Query: 196  SSDKDRVFGRKRLR---DLDDIGRRDRDPM-RRREHYNGSSRKDVRDKDFRDREPRGYWE 251
              +++R F   R R     D+I RRD+D   R+REH     R+DVRD+D+RDRE RGYWE
Sbjct: 173  GKERERCFSNNRKRPRGGRDEIDRRDKDGGGRKREHCGAVGRRDVRDRDWRDRETRGYWE 232

Query: 252  RDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSE-AKEKMPEEQARPYQLD 310
            RD+ GS  MVFR G+WE D NR  K A  +  E NG + KKSE AKE++PEE+AR YQLD
Sbjct: 233  RDKSGSTDMVFRTGAWEPDCNREDKMAIDMKLEKNGNLDKKSEEAKERVPEEKARQYQLD 292

Query: 311  VLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEV 370
            VLEQAK+KNTIAFLETGAGKTLIAVLLI+SI   L +QNKKMLAVFLVPKVPLVYQQAEV
Sbjct: 293  VLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLHKQNKKMLAVFLVPKVPLVYQQAEV 352

Query: 371  IREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLL 430
            IRE+TGY VGHYCGEMGQDFWDA+RWQREFDTK VLVMTAQILLNILRHSIIKMEAINLL
Sbjct: 353  IRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLL 412

Query: 431  ILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLE 490
            ILDECHHAVKKHPYSLVMSEFYHTT KE RPSVFGMTASPVNLKGVSSQVDCAIKI NLE
Sbjct: 413  ILDECHHAVKKHPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVSSQVDCAIKIRNLE 472

Query: 491  SKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRR 550
            SKLDS+VCTIKDRKELEKHVPMPSEVVVEYDKAASL  LHEQ+KQMEV VEEAA+ SSRR
Sbjct: 473  SKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEVEVEEAAKCSSRR 532

Query: 551  SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQS 610
            SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA+NYALGELGQWCAYKVAQS
Sbjct: 533  SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVAQS 592

Query: 611  FLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTN 670
            FL ALQNDERANYQLDVKFQE+YLSKVVSLL+C+L EGAVS K+A + DSENG V+ G+ 
Sbjct: 593  FLAALQNDERANYQLDVKFQETYLSKVVSLLKCQLSEGAVSDKNAGIDDSENGAVQSGSE 652

Query: 671  EIEEGE--LLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFV 728
              E  E  L DSHVVSGGEHVDVIIGAAVADGKVTPKVQ+LIKILLKYQHTEDFRAIIFV
Sbjct: 653  HEEMEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFV 712

Query: 729  ERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATS 788
            ERVV+ALVLPKVFAELPSLSFVK ASLIGHNNSQEMRT+QMQ+TIAKFRDGRVTLLVATS
Sbjct: 713  ERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATS 772

Query: 789  VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARN 848
            VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ER NLSH  FLRNARN
Sbjct: 773  VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERDNLSHEAFLRNARN 832

Query: 849  SEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL 908
            SEETLRKEAIERTDLSHLKDTSRLISVD  PGTVYQV+STGAVVSLNSAVGLIHFYCSQL
Sbjct: 833  SEETLRKEAIERTDLSHLKDTSRLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYCSQL 892

Query: 909  PSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAA 968
            PSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE LEGP+CSSMRLAQQAVCLAA
Sbjct: 893  PSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAA 952

Query: 969  CKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWIL 1028
            CKKLHEMGAFTDMLLPDKGSG ++EK +Q DEG+PLPGTARHREFYPEGVADIL+GEWIL
Sbjct: 953  CKKLHEMGAFTDMLLPDKGSGGEKEKDEQTDEGDPLPGTARHREFYPEGVADILKGEWIL 1012

Query: 1029 SGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE----------- 1077
            SG+D C  SKL HL+MY VKC N G SKDPFLTQVS+FAVLF +ELDAE           
Sbjct: 1013 SGKDACNNSKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIA 1072

Query: 1078 ---------------------LASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVV 1116
                                 LASLK+FHVRLMSIVLDVDVEP TTPWDPAKAYLFVP+V
Sbjct: 1073 RTVTTKSSLVFRGLISITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMV 1132

Query: 1117 SDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHG 1176
             DKSVDP N++DW LVE I   DAW NPLQ+ARPDVYLGTNERTLGGDRREYGFGKLRHG
Sbjct: 1133 GDKSVDPTNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHG 1192

Query: 1177 MAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH-NADMPT-GKLMMADSCANAGD 1234
            MAFGQKSHPTYGIRGA+AQFDVVKASGLVP+R+AMQ   + +M T GKLMMAD+C NA D
Sbjct: 1193 MAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLMMADTCTNAED 1252

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L G+IVTAAHSGKRFYV+SIRY+M+AE+SFPRKEGYLGPLEYSSYADYYKQKYGV+LI++
Sbjct: 1253 LIGKIVTAAHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYR 1312

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QPLIRGRGVSYCKNLLSPRFEHS   EGE EE  DKTYYVFLPPELC +HPLPGSLVRG
Sbjct: 1313 QQPLIRGRGVSYCKNLLSPRFEHS---EGESEETHDKTYYVFLPPELCLVHPLPGSLVRG 1369

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLK 1414
            AQRLPSIMRRVESMLLA+QLK+ INYPV ASKILEALTAASCQETFCYERAELLGDAYLK
Sbjct: 1370 AQRLPSIMRRVESMLLAVQLKNMINYPVQASKILEALTAASCQETFCYERAELLGDAYLK 1429

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYALSKGLQSYIQADRFAPSRWAAPGV
Sbjct: 1430 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1489

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
            LPVFDEDTKDG+SSLFDQE+S+++ +   D + + YE D+MEDGELE DSSSYRVLSSKT
Sbjct: 1490 LPVFDEDTKDGESSLFDQERSISKIER-MDCHTDGYE-DEMEDGELESDSSSYRVLSSKT 1547

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK+AANHLMKW+GIQ+E DP+ + C  +P  VP+S+LRSVDF A
Sbjct: 1548 LADVVEALIGVYYVEGGKNAANHLMKWMGIQIEFDPDTMDCTRKPFNVPDSILRSVDFDA 1607

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            LE AL +KFKDRGLLVE+ITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YTNLPP
Sbjct: 1608 LEGALNMKFKDRGLLVESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPP 1667

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            GRLTDLRAAAVNNENFARVAVKH LHVHLRHGSSAL++QI++FVKEV +EL KPGFNSFG
Sbjct: 1668 GRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQDELSKPGFNSFG 1727

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQER 1774
            LGDCKAPKVLGDI+ESIAGAIFLDSGRDT+VVW+VFQPLL PMVTPETLPMHPVRELQER
Sbjct: 1728 LGDCKAPKVLGDILESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQER 1787

Query: 1775 CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAE 1834
            CQQQAEGLEYKASR GNLATVEV+IDGVQVG AQNPQKKMAQKLAARNALA LKEKE  +
Sbjct: 1788 CQQQAEGLEYKASRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVGK 1847

Query: 1835 AKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNT 1894
             +EK D+NGK  KNG QTFTRQTLNDICLRRNWPMP YRCV EGGPAHAKRFT+AVRVNT
Sbjct: 1848 TQEKNDDNGK--KNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNT 1905

Query: 1895 TDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            TDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK YS
Sbjct: 1906 TDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS 1942


>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score = 3055 bits (7919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1564/1960 (79%), Positives = 1686/1960 (86%), Gaps = 77/1960 (3%)

Query: 20   SYWLDACEDILIDEFVNFD-TSVVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNGSGLPN 78
            SYWLDACEDI  D+F++FD +S+V D  DN SNQD     FFGGID ILDSIKNG+GLP 
Sbjct: 14   SYWLDACEDISCDDFIDFDVSSIVSDQPDNPSNQD-----FFGGIDKILDSIKNGAGLP- 67

Query: 79   SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVDRKRKLENCENV---NGY--LVN 133
                 L +  E      N  A G + L +N + +DG       ++   V   NG   L N
Sbjct: 68   -----LNHAVEPPNN--NGTAAGEVCLPSNATLEDGAPAADAFDHSGGVARSNGSSKLSN 120

Query: 134  GKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQ 193
            G   G L + +++E G    NG +D        FD E+R SKRA +    NE  Y  RG 
Sbjct: 121  GNETGVLVN-YSQERGAPPLNGGHD--------FDGEERCSKRAWLGGYNNERPYYCRGN 171

Query: 194  YCSSDKDRVFG---RKRLR-DLDDIGRRDRDPM-RRREHYNGSSRKDVRDKDFRDREPRG 248
            Y   +++R F    RKR R D D+I R+D+D   R+REHY   +R+DVRD+D RDRE RG
Sbjct: 172  YQGKERERCFNNNNRKRPRGDRDEIDRKDKDGGGRKREHYGAVARRDVRDRDCRDRETRG 231

Query: 249  YWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSE-AKEKMPEEQARPY 307
            YWERD+ GS  M+FR G+WE DHNR  K       E  GK+ KKSE A E++PEE+AR Y
Sbjct: 232  YWERDKSGSTDMIFRTGAWEPDHNRDDKMVIDTKLENYGKLDKKSEDAIERVPEEKARQY 291

Query: 308  QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQ 367
            QLDVLEQ+K+KNTIAFLETGAGKTLIAVLLI+SI + LQ+QNKKMLAVFLVPKVPLVYQQ
Sbjct: 292  QLDVLEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVFLVPKVPLVYQQ 351

Query: 368  AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
            AEVIRE+TGY VGHYCGEMGQDFWDA+RWQREFDTK VLVMTAQILLNILRHSIIKMEAI
Sbjct: 352  AEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAI 411

Query: 428  NLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKIC 487
            NLLILDECHHAVKKHPYSLVMSEFYHTT KE RPSVFGMTASPVNLKGVSSQVDCAIKI 
Sbjct: 412  NLLILDECHHAVKKHPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVSSQVDCAIKIR 471

Query: 488  NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSS 547
            NLESKLDS+VCTIKDRKELEKHVPMPSEVVVEYDKAASL  LHEQ+KQMEV VEEAA+ S
Sbjct: 472  NLESKLDSIVCTIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEVEVEEAAKYS 531

Query: 548  SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKV 607
            SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA+NYALGELGQWCAYKV
Sbjct: 532  SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKV 591

Query: 608  AQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEG 667
            A SFL ALQNDERANYQLDVKFQE+YLSKVVSLL+C+L EGA S K+A + DSENG  + 
Sbjct: 592  ALSFLAALQNDERANYQLDVKFQETYLSKVVSLLKCQLSEGAASDKNAGIDDSENGAAQS 651

Query: 668  GTNEIEEGE--LLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAI 725
            G+   E  E  L DSHVVSGGEHVDVIIGAAVADGKVTPKVQ+LIKILLKYQHTEDFRAI
Sbjct: 652  GSEHEEMEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAI 711

Query: 726  IFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLV 785
            IFVERVV+ALVLPKVFAELPSLSFVK ASLIGHNNSQEMRT+QMQ+TIAKFRDGRVTLLV
Sbjct: 712  IFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLV 771

Query: 786  ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRN 845
            ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ER NLSH  FLRN
Sbjct: 772  ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERDNLSHEAFLRN 831

Query: 846  ARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
            A+NSEETLRKEAIERTDLSHLKDTSRLISVD  PGTVYQV+STGAVVSLNSAVGLIHFYC
Sbjct: 832  AKNSEETLRKEAIERTDLSHLKDTSRLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYC 891

Query: 906  SQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVC 965
            SQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE LEGP+CSSMRLAQQAVC
Sbjct: 892  SQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVC 951

Query: 966  LAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGE 1025
            LAACKKLHEMGAFTDMLLPDKGSG ++EK +Q DEG+PLPGTARHREFYPEGVADIL+GE
Sbjct: 952  LAACKKLHEMGAFTDMLLPDKGSGGEREKDEQTDEGDPLPGTARHREFYPEGVADILKGE 1011

Query: 1026 WILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE-------- 1077
            WILS +D C   KL HL+MY VKC N G SKDPFLTQVS+FAVLF +ELDAE        
Sbjct: 1012 WILSEKDACNNYKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDL 1071

Query: 1078 ------------------------LASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFV 1113
                                    LASLK+FHVRLMSIVLDVDVEP TTPWDPAKAYLFV
Sbjct: 1072 FIARTVTTKASLVFSGLINITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFV 1131

Query: 1114 PVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKL 1173
            P+V DKSVDPMN++DW LVE I   DAW NPLQ+ARPDVYLGTNERTLGGDRREYGFGKL
Sbjct: 1132 PMVGDKSVDPMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKL 1191

Query: 1174 RHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH-NADMPT-GKLMMADSCAN 1231
            RHGMAFGQKSHPTYGIRGA+AQFDVVKASGLVP+R+AMQ   + +M T GKLMMAD C N
Sbjct: 1192 RHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLMMADICTN 1251

Query: 1232 AGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVEL 1291
            A DL GRIVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGPLEYSSYADYYKQKYGV L
Sbjct: 1252 AEDLVGRIVTAAHSGKRFYVDSICYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVNL 1311

Query: 1292 IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
            I+K+QPLIRGRGVSYCKNLLSPRFEHSE   GE EEI DKTYYVFLPPELC +HPLPGSL
Sbjct: 1312 IYKQQPLIRGRGVSYCKNLLSPRFEHSE---GESEEIHDKTYYVFLPPELCLVHPLPGSL 1368

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDA 1411
            VRGAQRLPSIMRRVESMLLA+QLK+ INYPV ASKIL ALTAASCQETFCYERAELLGDA
Sbjct: 1369 VRGAQRLPSIMRRVESMLLAVQLKNMINYPVLASKILGALTAASCQETFCYERAELLGDA 1428

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
            YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYALSKGLQSYIQADRFAPSRWAA
Sbjct: 1429 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAA 1488

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
            PGVLPVFDEDTKDG+SSLFDQE+S+++ +   D + N YED+ MEDGELE DSSSYRVLS
Sbjct: 1489 PGVLPVFDEDTKDGESSLFDQERSISKIER-MDCHTNGYEDE-MEDGELESDSSSYRVLS 1546

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVD 1591
            SKTLADVVEALIGVYYVEGGK+AANHLMKWIGIQ+E DP+ + C  +P  VP+S+LRSVD
Sbjct: 1547 SKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQIEFDPDTMECTKKPFNVPDSILRSVD 1606

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            F ALE AL +KF DRGLLVE+ITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YTN
Sbjct: 1607 FDALEGALNMKFNDRGLLVESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTN 1666

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
            LPPGRLTDLRAAAVNNENFARVAVKH LHVHLRHGSSAL++QI++FVKEV  EL KPGFN
Sbjct: 1667 LPPGRLTDLRAAAVNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQVELSKPGFN 1726

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
            SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT+VVW+VFQPLL PMVTPETLPMHPVREL
Sbjct: 1727 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVREL 1786

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            QERCQQQAEGLEYKASR GNLATVEV+IDGVQVG AQNPQKKMAQKLAARNALA LKEKE
Sbjct: 1787 QERCQQQAEGLEYKASRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKE 1846

Query: 1832 TAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVR 1891
              + +EK DENGK  KNG QTFTRQTLNDICLRRNWPMP YRCV EGGPAHAKRFT+AVR
Sbjct: 1847 VGKTQEKNDENGK--KNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVR 1904

Query: 1892 VNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            VNTTD+GWTDECVGEPMPSVKKAKDSAAVLLLELLNK YS
Sbjct: 1905 VNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKLYS 1944


>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
          Length = 1886

 Score = 2905 bits (7531), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1461/1965 (74%), Positives = 1643/1965 (83%), Gaps = 115/1965 (5%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCSS-DKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +S + DR   RKR R+ D+ G       ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNK----KKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVM 408
            N+KML+VFLVPKVPLVYQQAEVIR QT + VGHYCGEMGQDFWD++RWQREF++KQVLVM
Sbjct: 294  NRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVM 353

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTA 468
            TAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTA
Sbjct: 354  TAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTA 413

Query: 469  SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            SPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WS
Sbjct: 414  SPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWS 473

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI K
Sbjct: 474  LHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK 533

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
            LRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EG
Sbjct: 534  LRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEG 593

Query: 649  AVSKKDAKVV-DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
            A ++K A  V   ENG      +E+EEGEL D  VVSGGEHVD +IGAAVADGKVTPKVQ
Sbjct: 594  AAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQ 650

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
            SLIK+LLKYQHT DFRAI+FVERVVAALVLPKVFAELPSLSF++ AS+IGHNNSQEM++ 
Sbjct: 651  SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSS 710

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSD
Sbjct: 711  QMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSD 770

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            YILM+ERGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+
Sbjct: 771  YILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEA 830

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA+VSLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE
Sbjct: 831  TGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE 890

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGT
Sbjct: 891  ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 950

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFA 1067
            ARHREFYPEGVAD+L+GEW+ SG++ C  SKLFHL+MY V+CV+ G SKDPFL++VS+FA
Sbjct: 951  ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFA 1010

Query: 1068 VLFSSELDAE---------LASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSD 1118
            +LF +ELDAE         L+SLK FHVRLMSIVLDVDVEP TTPWDPAKAYLFVPV  +
Sbjct: 1011 ILFGNELDAEGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPVTDN 1070

Query: 1119 KSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMA 1178
             S++P+  ++W+LVEKITKT AW NPLQRARPDVYLGTNERTLGGDRREYGFGKLRH + 
Sbjct: 1071 TSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHNIV 1130

Query: 1179 FGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH-NADMPTGKLMMADSCANAGDLEG 1237
            FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +     D+  GKLMMAD C  A DL G
Sbjct: 1131 FGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADGCMVAEDLIG 1190

Query: 1238 RIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQP 1297
            +IVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGPLEY++YADYYKQKYGV+L  K+QP
Sbjct: 1191 KIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKYGVDLNCKQQP 1250

Query: 1298 LIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
            LI+GRGVSYCKNLLSPRF    EQ GE E +LDKTYYVFLPPELC +HPL GSL+RGAQR
Sbjct: 1251 LIKGRGVSYCKNLLSPRF----EQSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQR 1306

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            LPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTAASCQETFCYERAELLGDAYLKWVV
Sbjct: 1307 LPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELLGDAYLKWVV 1366

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1367 SRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 1426

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 1427 FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 1481

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALED 1597
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF  LE 
Sbjct: 1482 VVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLER 1541

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRL
Sbjct: 1542 ALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRL 1601

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD 1717
            TDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++QIR+FVKEV  E  KPGFNSFGLGD
Sbjct: 1602 TDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFGLGD 1661

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQ 1777
            CKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL PMVTPETLPMHPVRELQERCQQ
Sbjct: 1662 CKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQERCQQ 1721

Query: 1778 QAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKE 1837
            QAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKMAQKLAARNALA LKEKE AE+KE
Sbjct: 1722 QAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAESKE 1781

Query: 1838 KGDENGK-----------KRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRF 1886
            K   NG             +KNG Q FTRQTLNDICLR+NWPMP YRCV+EGGPAHAKRF
Sbjct: 1782 KHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRF 1841

Query: 1887 TYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            T+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLNK +S
Sbjct: 1842 TFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 1886


>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
 gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
            Full=Dicer-like protein 1; Short=AtDCL1; AltName:
            Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
            CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
            1; AltName: Full=Protein SUSPENSOR 1
 gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
 gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
 gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
          Length = 1909

 Score = 2898 bits (7513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1461/1988 (73%), Positives = 1643/1988 (82%), Gaps = 138/1988 (6%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCSS-DKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +S + DR   RKR R+ D+ G       ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNK----KKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVM 408
            N+KML+VFLVPKVPLVYQQAEVIR QT + VGHYCGEMGQDFWD++RWQREF++KQVLVM
Sbjct: 294  NRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVM 353

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTA 468
            TAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTA
Sbjct: 354  TAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTA 413

Query: 469  SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            SPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WS
Sbjct: 414  SPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWS 473

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI K
Sbjct: 474  LHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK 533

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
            LRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EG
Sbjct: 534  LRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEG 593

Query: 649  AVSKKDAKVV-DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
            A ++K A  V   ENG      +E+EEGEL D  VVSGGEHVD +IGAAVADGKVTPKVQ
Sbjct: 594  AAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQ 650

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
            SLIK+LLKYQHT DFRAI+FVERVVAALVLPKVFAELPSLSF++ AS+IGHNNSQEM++ 
Sbjct: 651  SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSS 710

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSD
Sbjct: 711  QMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSD 770

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            YILM+ERGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+
Sbjct: 771  YILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEA 830

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA+VSLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE
Sbjct: 831  TGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE 890

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGT
Sbjct: 891  ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 950

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFA 1067
            ARHREFYPEGVAD+L+GEW+ SG++ C  SKLFHL+MY V+CV+ G SKDPFL++VS+FA
Sbjct: 951  ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFA 1010

Query: 1068 VLFSSELDAE--------------------------------LASLKNFHVRLMSIVLDV 1095
            +LF +ELDAE                                L+SLK FHVRLMSIVLDV
Sbjct: 1011 ILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDV 1070

Query: 1096 DVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLG 1155
            DVEP TTPWDPAKAYLFVPV  + S++P+  ++W+LVEKITKT AW NPLQRARPDVYLG
Sbjct: 1071 DVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLG 1130

Query: 1156 TNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH- 1214
            TNERTLGGDRREYGFGKLRH + FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +   
Sbjct: 1131 TNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEV 1190

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
              D+  GKLMMAD C  A DL G+IVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGPL
Sbjct: 1191 EEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPL 1250

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            EY++YADYYKQKYGV+L  K+QPLI+GRGVSYCKNLLSPRF    EQ GE E +LDKTYY
Sbjct: 1251 EYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRF----EQSGESETVLDKTYY 1306

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAA 1394
            VFLPPELC +HPL GSL+RGAQRLPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTAA
Sbjct: 1307 VFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAA 1366

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KG
Sbjct: 1367 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKG 1426

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+E+     K  +++N + +ED +
Sbjct: 1427 LQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGE 1481

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV 
Sbjct: 1482 MEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVD 1541

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGD 1634
               +   VPESVL+S+DF  LE ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVGD
Sbjct: 1542 GTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGD 1601

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            AVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++QI
Sbjct: 1602 AVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQI 1661

Query: 1695 RDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            R+FVKEV  E  KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL
Sbjct: 1662 REFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLL 1721

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKM 1814
             PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKM
Sbjct: 1722 QPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKM 1781

Query: 1815 AQKLAARNALAVLKEKETAEAKEKGDENGK-----------KRKNGTQTFTRQTLNDICL 1863
            AQKLAARNALA LKEKE AE+KEK   NG             +KNG Q FTRQTLNDICL
Sbjct: 1782 AQKLAARNALAALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICL 1841

Query: 1864 RRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
            R+NWPMP YRCV+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLL
Sbjct: 1842 RKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLL 1901

Query: 1924 ELLNKWYS 1931
            ELLNK +S
Sbjct: 1902 ELLNKTFS 1909


>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
 gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
          Length = 1910

 Score = 2898 bits (7512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1461/1989 (73%), Positives = 1643/1989 (82%), Gaps = 139/1989 (6%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCSS-DKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +S + DR   RKR R+ D+ G       ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNK----KKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVM 408
            N+KML+VFLVPKVPLVYQQAEVIR QT + VGHYCGEMGQDFWD++RWQREF++KQVLVM
Sbjct: 294  NRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVM 353

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTA 468
            TAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTA
Sbjct: 354  TAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTA 413

Query: 469  SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            SPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WS
Sbjct: 414  SPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWS 473

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI K
Sbjct: 474  LHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK 533

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
            LRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EG
Sbjct: 534  LRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEG 593

Query: 649  AVSKKDAKVV-DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
            A ++K A  V   ENG      +E+EEGEL D  VVSGGEHVD +IGAAVADGKVTPKVQ
Sbjct: 594  AAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQ 650

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
            SLIK+LLKYQHT DFRAI+FVERVVAALVLPKVFAELPSLSF++ AS+IGHNNSQEM++ 
Sbjct: 651  SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSS 710

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSD
Sbjct: 711  QMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSD 770

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            YILM+ERGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+
Sbjct: 771  YILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEA 830

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA+VSLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE
Sbjct: 831  TGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE 890

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGT
Sbjct: 891  ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 950

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFA 1067
            ARHREFYPEGVAD+L+GEW+ SG++ C  SKLFHL+MY V+CV+ G SKDPFL++VS+FA
Sbjct: 951  ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFA 1010

Query: 1068 VLFSSELDAE---------------------------------LASLKNFHVRLMSIVLD 1094
            +LF +ELDAE                                 L+SLK FHVRLMSIVLD
Sbjct: 1011 ILFGNELDAEVVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLD 1070

Query: 1095 VDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYL 1154
            VDVEP TTPWDPAKAYLFVPV  + S++P+  ++W+LVEKITKT AW NPLQRARPDVYL
Sbjct: 1071 VDVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYL 1130

Query: 1155 GTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH 1214
            GTNERTLGGDRREYGFGKLRH + FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +  
Sbjct: 1131 GTNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKE 1190

Query: 1215 -NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGP 1273
               D+  GKLMMAD C  A DL G+IVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGP
Sbjct: 1191 VEEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGP 1250

Query: 1274 LEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
            LEY++YADYYKQKYGV+L  K+QPLI+GRGVSYCKNLLSPRF    EQ GE E +LDKTY
Sbjct: 1251 LEYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRF----EQSGESETVLDKTY 1306

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
            YVFLPPELC +HPL GSL+RGAQRLPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTA
Sbjct: 1307 YVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTA 1366

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL K
Sbjct: 1367 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVK 1426

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GLQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+E+     K  +++N + +ED 
Sbjct: 1427 GLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDG 1481

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
            +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV
Sbjct: 1482 EMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEV 1541

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVG 1633
                +   VPESVL+S+DF  LE ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVG
Sbjct: 1542 DGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVG 1601

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++Q
Sbjct: 1602 DAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQ 1661

Query: 1694 IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            IR+FVKEV  E  KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPL
Sbjct: 1662 IREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPL 1721

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKK
Sbjct: 1722 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKK 1781

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGK-----------KRKNGTQTFTRQTLNDIC 1862
            MAQKLAARNALA LKEKE AE+KEK   NG             +KNG Q FTRQTLNDIC
Sbjct: 1782 MAQKLAARNALAALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDIC 1841

Query: 1863 LRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLL 1922
            LR+NWPMP YRCV+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLL
Sbjct: 1842 LRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLL 1901

Query: 1923 LELLNKWYS 1931
            LELLNK +S
Sbjct: 1902 LELLNKTFS 1910


>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
          Length = 1909

 Score = 2894 bits (7502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1459/1988 (73%), Positives = 1642/1988 (82%), Gaps = 138/1988 (6%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCS-SDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +  + DR   RKR R+ D+ G       ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNFREGDRFMNRKRTRNWDEAGNNK----KKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVM 408
            N+KML+VFLVPKVPLVYQQAEVIR QT + VGHYCGEMGQDFWD++RWQREF++KQVLVM
Sbjct: 294  NRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVM 353

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTA 468
            TAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTA
Sbjct: 354  TAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTA 413

Query: 469  SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            SPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WS
Sbjct: 414  SPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWS 473

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI K
Sbjct: 474  LHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK 533

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
            LRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EG
Sbjct: 534  LRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEG 593

Query: 649  AVSKKDAKVV-DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
            A ++K A  V   ENG      +E+EEGEL D  VVSGGEHVD +IGAAVADGKVTPKVQ
Sbjct: 594  AAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQ 650

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
            SLIK+LLKYQHT DFRAI+FVERVVAALVLPKVFAELPSLSF++ AS+IGHNNSQEM++ 
Sbjct: 651  SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSS 710

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSD
Sbjct: 711  QMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSD 770

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            YILM+ERGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+
Sbjct: 771  YILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEA 830

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA+VSLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE
Sbjct: 831  TGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE 890

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGT
Sbjct: 891  ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 950

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFA 1067
            ARHREFYPEGVAD+L+GEW+ SG++ C  SKLFHL+M+ V+CV+ G SKDPFL++VS+FA
Sbjct: 951  ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMHNVRCVDFGSSKDPFLSEVSEFA 1010

Query: 1068 VLFSSELDAE--------------------------------LASLKNFHVRLMSIVLDV 1095
            +LF +ELDAE                                L+SLK FHVRLMSIVLDV
Sbjct: 1011 ILFGNELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDV 1070

Query: 1096 DVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLG 1155
            DVEP TTPWDPAKAYLFVPV  + S++P+  ++W+LVEKITKT AW NPLQRARPDVYLG
Sbjct: 1071 DVEPSTTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLG 1130

Query: 1156 TNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH- 1214
            TNERTLGGDRREYGFGKLRH + FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +   
Sbjct: 1131 TNERTLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEV 1190

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
              D+  GKLMMAD C  A DL G+IVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGPL
Sbjct: 1191 EEDLSKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPL 1250

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            EY++YADYYKQKYGV+L  K+QPLI+GRGVSYCKNLLSPRF    EQ GE E +LDKTYY
Sbjct: 1251 EYNTYADYYKQKYGVDLNCKQQPLIKGRGVSYCKNLLSPRF----EQSGESETVLDKTYY 1306

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAA 1394
            VFLPPELC +HPL GSL+RGAQRLPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTAA
Sbjct: 1307 VFLPPELCVVHPLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAA 1366

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KG
Sbjct: 1367 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKG 1426

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+E+     K  +++N + +ED +
Sbjct: 1427 LQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGE 1481

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV 
Sbjct: 1482 MEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVD 1541

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGD 1634
               +   VPESVL+S+DF  LE ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVGD
Sbjct: 1542 GTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGD 1601

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            AVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++QI
Sbjct: 1602 AVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQI 1661

Query: 1695 RDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            R+FVKEV  E  KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL
Sbjct: 1662 REFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLL 1721

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKM 1814
             PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKM
Sbjct: 1722 QPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKM 1781

Query: 1815 AQKLAARNALAVLKEKETAEAKEKGDENGK-----------KRKNGTQTFTRQTLNDICL 1863
            AQKLAARNALA LKEKE AE+KEK   NG             +KNG Q FTRQTLNDICL
Sbjct: 1782 AQKLAARNALAALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICL 1841

Query: 1864 RRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
            R+NWPMP YRCV+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLL
Sbjct: 1842 RKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLL 1901

Query: 1924 ELLNKWYS 1931
            ELLNK +S
Sbjct: 1902 ELLNKTFS 1909


>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
            III, bacterial [Medicago truncatula]
          Length = 1939

 Score = 2836 bits (7352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1416/1790 (79%), Positives = 1538/1790 (85%), Gaps = 118/1790 (6%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEA---NGINQECNGKVGKKSEAKEKMP 300
            R+ +GYWERD+  SN +VFR G+WE + + +  +    N I QE       K +    +P
Sbjct: 165  RDVKGYWERDK-SSNDLVFRSGTWEPNLHTSQHKMDIDNPIKQE-------KPKETVPVP 216

Query: 301  EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
            EE+AR YQLDVLEQAK +NTIAFLETGAGKTLIAVLLI+SI   L  QNKKMLAVFLVPK
Sbjct: 217  EEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSIHETLHLQNKKMLAVFLVPK 276

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
            VPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA+RWQREFDTK VLVMTAQILLNILRHS
Sbjct: 277  VPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHS 336

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKRPSVFGMTASPVNLKGVSSQV
Sbjct: 337  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQV 396

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            DCAIKI NLESKLDS+VCTIKDRKELEKHVPMPSE+VV+YDKAASL  LHEQ+KQME  V
Sbjct: 397  DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVKYDKAASLCYLHEQIKQMETEV 456

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEAA+SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA+NYALGELG
Sbjct: 457  EEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELG 516

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            QWCAYKVAQSFL ALQNDERANYQLDVKFQESYLSKVVSLL+C+L EGA+S K+  V DS
Sbjct: 517  QWCAYKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSLLKCQLSEGAISDKNDGVDDS 576

Query: 661  ENGFVEGGTNEIEEGE---LLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
            +NG    G++E EE E   L DSHVVSGGEHVDVIIGAAVADGKVTPKVQ+LIKILLKYQ
Sbjct: 577  QNGAAHSGSDEHEEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQ 636

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFR 777
            +T+DFRAIIFVERVV+ALVLPKVFAELPSLSFVK ASLIGHNNSQEMRT QM +TIAKFR
Sbjct: 637  NTDDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTHQMHDTIAKFR 696

Query: 778  DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
            DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGNL
Sbjct: 697  DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNL 756

Query: 838  SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSA 897
            SH  FL+NARNSEETLR+EAIERTDLSHLKD+SRLISVD  P T+YQV+STGAVVSLNSA
Sbjct: 757  SHEAFLKNARNSEETLRREAIERTDLSHLKDSSRLISVDTHPETMYQVKSTGAVVSLNSA 816

Query: 898  VGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSM 957
            VGL+HFYCSQLPSDRYSILRPEFIME+HE  GGPTEYSC+LQLPCNAPFE LEGP+CSS+
Sbjct: 817  VGLVHFYCSQLPSDRYSILRPEFIMEKHENSGGPTEYSCRLQLPCNAPFENLEGPICSSI 876

Query: 958  RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEG 1017
            RLAQQA   +AC+KLHEMGAFTDMLLPDKGSGE++EK +QNDEG+ LPGTARHREFYPEG
Sbjct: 877  RLAQQA---SACRKLHEMGAFTDMLLPDKGSGEEKEKAEQNDEGDALPGTARHREFYPEG 933

Query: 1018 VADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE 1077
            VADIL+GEWILSG+D C  SKL HL+MYT+KC N G SKDPFLTQVSDFAVLF +ELDAE
Sbjct: 934  VADILKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSKDPFLTQVSDFAVLFGTELDAE 993

Query: 1078 --------------------------------LASLKNFHVRLMSIVLDVDVEPYTTPWD 1105
                                            L SLK+FHVRLMSIVLDVDVEP TTPWD
Sbjct: 994  VLSMSMDLFIARTVTTKASLVFRESIDITESQLTSLKSFHVRLMSIVLDVDVEPSTTPWD 1053

Query: 1106 PAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDR 1165
            PAKAYLFVP+V DKS DPMN++DW LVE I   DAW NPLQ+ARPDVYLGTNERTLGGDR
Sbjct: 1054 PAKAYLFVPMVGDKSSDPMNQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDR 1113

Query: 1166 REYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHN-ADMPT-GKL 1223
            REYGFGKLRHG+AFGQKSHPTYGIRGA+AQFDVVKASGLVP+R++M+  N  +M T GKL
Sbjct: 1114 REYGFGKLRHGLAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDSMETQNHINMTTKGKL 1173

Query: 1224 MMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL--------- 1274
            MMAD+C +  DL GRIVTAAHSGKRFYV+SIRYEMTAE+SFPRKEGYLGPL         
Sbjct: 1174 MMADTCTSPDDLVGRIVTAAHSGKRFYVDSIRYEMTAENSFPRKEGYLGPLEYSSYADYY 1233

Query: 1275 --------------------------------EYSSYADYYKQ---------------KY 1287
                                            +Y S+     Q               +Y
Sbjct: 1234 KQKYDEASVVTCNSEGYRECPMESDNSMLILPDYRSFLSLPAQLRVHMATGSLLLLLIRY 1293

Query: 1288 GVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
            GV+L +K+QPLIRGRGVSYCKNLLSPRFEHSE  E E EE  DKTYYVFLPPELC +HPL
Sbjct: 1294 GVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTYYVFLPPELCLVHPL 1353

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK------ILEALTAASCQETFC 1401
            PGSLVRGAQRLPSIMRRVESMLLA+QLK+ INYPV ASK      ILEALTAASCQETFC
Sbjct: 1354 PGSLVRGAQRLPSIMRRVESMLLAVQLKNMINYPVQASKVSSQLKILEALTAASCQETFC 1413

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YERAELLGDAYLKWVVSRFLFLK+PQKHEGQLTRMRQQMVSN+VLY+YALSKGLQSYI A
Sbjct: 1414 YERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSKGLQSYILA 1473

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
            DRFAPSRWAAPGVLPVFDEDTKD +SSLFDQE+S+   K     N +E+ED+ MEDGELE
Sbjct: 1474 DRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIF--KAERMDNTDEFEDE-MEDGELE 1530

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPAC 1581
             DSSSYRVLSSKTLADVVEALIGVYYVEGGK+AANHLMKWIGI +E DP+E+ C ++P+ 
Sbjct: 1531 SDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEMECITKPSN 1590

Query: 1582 VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 1641
            VP+S+LRSVDF ALE AL IKFKD+GLL+E+ITHASRPSSGVSCYQRLEFVGDAVLDHLI
Sbjct: 1591 VPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVGDAVLDHLI 1650

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            T+HLFFSYT+LPPGRLTDLRAAAVNNENFARV VKH LH+HLRHGSSAL++QI+DFVKEV
Sbjct: 1651 TRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQIKDFVKEV 1710

Query: 1702 LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPE 1761
             +EL KPGFNSFGLGDCKAPKVLGDI+ESIAGAIFLDSGR+T+VVW+VFQPLL PMVTPE
Sbjct: 1711 QDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPLLHPMVTPE 1770

Query: 1762 TLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAAR 1821
            TLPMHPVRELQERCQQQAEGLEY+ASR+GNLATVEV+IDGVQVG AQNPQKKMAQKLAAR
Sbjct: 1771 TLPMHPVRELQERCQQQAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKKMAQKLAAR 1830

Query: 1822 NALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPA 1881
            NALA LKEKE ++ +EK DE  K+ KNG QTFTRQTLNDICLRRNWPMP YRCV EGGPA
Sbjct: 1831 NALAALKEKEESKIQEKNDE--KETKNGNQTFTRQTLNDICLRRNWPMPFYRCVSEGGPA 1888

Query: 1882 HAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            HAKRFT+AVRVNTTDKGWTDECVGE MPSVKKAKDSAAVLLLEL+NK YS
Sbjct: 1889 HAKRFTFAVRVNTTDKGWTDECVGEAMPSVKKAKDSAAVLLLELINKLYS 1938



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 7/60 (11%)

Query: 21 YWLDACEDILI--DEFVNFDTSVVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNGSGLPN 78
          YWLDACEDI I  D+ ++FD S   D   N +NQD     FFGGID I DSIKNG+GLP+
Sbjct: 26 YWLDACEDISISCDDIIDFDVSNDSDQQPNNNNQD-----FFGGIDRIFDSIKNGAGLPD 80


>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1962

 Score = 2819 bits (7307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1446/2029 (71%), Positives = 1629/2029 (80%), Gaps = 190/2029 (9%)

Query: 18   QSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNG 73
            + SYWLDACEDI   LID+ V+ FD S V  +V+ +++ + + NDFFGGIDHILDSIKNG
Sbjct: 9    KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDDNGVINDFFGGIDHILDSIKNG 66

Query: 74   SGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVDRKRKLENCENVNGYLVN 133
             GLPN   N + + +E S   +    E  + +  NG  K+G  R                
Sbjct: 67   GGLPN---NGVSDTNEVSVTPQVIAKEVTVSVKENGLQKNGGTR---------------- 107

Query: 134  GKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRARVSVCKNE-SQYSSRG 192
                    D  +KE G                    +DR  KRARV   ++E S  S RG
Sbjct: 108  --------DELSKEEG-------------------GKDR--KRARVCSYQSERSNLSGRG 138

Query: 193  QYCSSDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSSRKDVRDKDFRDREPRGYWER 252
            Q  S ++DR   RKR R+ D+ G       ++RE YN       R+        RGYWER
Sbjct: 139  QVNSRERDRFMNRKRTRNWDEAGNN-----KKRECYNYRRDGRDREG-------RGYWER 186

Query: 253  DRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV----GKKSEAKEKMPEEQARPYQ 308
            D++GSN +VFR G+WEADH R  K+ +G N+EC+ KV     K  E KEK+ EEQAR YQ
Sbjct: 187  DKVGSNELVFRSGTWEADHERGVKKESGRNRECDVKVEENKSKPEERKEKVVEEQARRYQ 246

Query: 309  LDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQA 368
            LDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  +N+K+L+VFLVPKVPLVYQQA
Sbjct: 247  LDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSKNRKLLSVFLVPKVPLVYQQA 306

Query: 369  EVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAIN 428
            EVIR QT + VGHYCGEMGQDFWDA+RWQREF++KQVLVMTAQILLNILRHSII+ME I+
Sbjct: 307  EVIRNQTCFQVGHYCGEMGQDFWDARRWQREFESKQVLVMTAQILLNILRHSIIRMETID 366

Query: 429  LLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICN 488
            LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTASPVNLKGVSSQVDCAIKI N
Sbjct: 367  LLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRN 426

Query: 489  LESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSS 548
            LE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WSLHE +KQM VAVEEAAQ+SS
Sbjct: 427  LETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWSLHETIKQMIVAVEEAAQASS 486

Query: 549  RRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVA 608
            R+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI KLRAINY L ELGQWCAYKV 
Sbjct: 487  RKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCAYKVG 546

Query: 609  QSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD-SENGFVEG 667
            QSFLTALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EGA ++K A  V  +ENG    
Sbjct: 547  QSFLTALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEGAAAEKVAAEVSKTENG---N 603

Query: 668  GTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIF 727
              +E+EEGEL D HVVSGGEHVD +IGAAVADGKVTPKVQSLIK+LLKYQHT DFRAI+F
Sbjct: 604  ANDEMEEGELPDDHVVSGGEHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTSDFRAIVF 663

Query: 728  VERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVAT 787
            VERVVAALVLPKVFAELPSL F++ AS+IGHNNSQEM++ QMQ+TI+KFRDG VTLLVAT
Sbjct: 664  VERVVAALVLPKVFAELPSLGFIRCASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVAT 723

Query: 788  SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR 847
            SVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN+SHA FLRNAR
Sbjct: 724  SVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNVSHAAFLRNAR 783

Query: 848  NSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQ 907
            NSEETLRKEAIERTDLSHLKDTSRLIS+D VPGT+Y+VE+TGA+VSLNSAVGL+HFYCSQ
Sbjct: 784  NSEETLRKEAIERTDLSHLKDTSRLISIDTVPGTIYKVEATGAMVSLNSAVGLVHFYCSQ 843

Query: 908  LPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLA 967
            LP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE LEGPVCSSMRLAQQAVCLA
Sbjct: 844  LPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGPVCSSMRLAQQAVCLA 903

Query: 968  ACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
            ACKKLHEMGAFTDMLLPDKGSG+  EKVDQ+DEGEP+PGTARHREFYPEGVAD+L+GEWI
Sbjct: 904  ACKKLHEMGAFTDMLLPDKGSGQDAEKVDQDDEGEPVPGTARHREFYPEGVADVLKGEWI 963

Query: 1028 LSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE---------- 1077
            LSG++ C  SKLFHL+MY+V+CV+ G SKDPFLT+VS+FA+LF +ELDAE          
Sbjct: 964  LSGKEICESSKLFHLYMYSVRCVDLGSSKDPFLTEVSEFAILFGNELDAEVLSMSMDLYV 1023

Query: 1078 ----------------------LASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPV 1115
                                  L+SLK FHVRLMSIVLDVDVEP TTPWDPAKAYLFVPV
Sbjct: 1024 ARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPV 1083

Query: 1116 VSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRH 1175
              + S++P+  ++W+LVEKITKT AW NPLQRARPDVYLGTNERTLGGDRREYGFGKLRH
Sbjct: 1084 SDNTSIEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNERTLGGDRREYGFGKLRH 1143

Query: 1176 GMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH-NADMPTGKLMMADSCANAGD 1234
             + FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +     D+  GKLMMAD C  A D
Sbjct: 1144 NIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDLSKGKLMMADGCMVAED 1203

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESS-------------------FPRKEGYLGPLE 1275
            L G+IVTAAHSGKRFYV+SI Y+M+AE+S                   + +KE     + 
Sbjct: 1204 LVGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNTYADYYKQKEASTLLIL 1263

Query: 1276 YSSYADYY------------KQ-----------------------------KYGVELIFK 1294
            Y  + D++            KQ                             +YGV+L  K
Sbjct: 1264 YCYHEDFHGLNPPPVLCKNEKQSLSMYCEISTSMTRIYVQDRLFFFFLHNLRYGVDLNCK 1323

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QPLI+GRGVSYCKNLLSPRFE    Q GE E ILDKTYYVFLPPELC +HPL GSLVRG
Sbjct: 1324 QQPLIKGRGVSYCKNLLSPRFE----QSGESETILDKTYYVFLPPELCVVHPLSGSLVRG 1379

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLK 1414
            AQRLPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTAASCQETFCYERAELLGDAYLK
Sbjct: 1380 AQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELLGDAYLK 1439

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1440 WVVSRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 1499

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 1500 PPVFDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKT 1554

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF  
Sbjct: 1555 LADVVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDFVG 1614

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            LE ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPP
Sbjct: 1615 LERALKFEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPP 1674

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            GRLTDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++QIR+FVKEV  E  KPGFNSFG
Sbjct: 1675 GRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNSFG 1734

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQER 1774
            LGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL PMVTPETLPMHPVRELQER
Sbjct: 1735 LGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPMHPVRELQER 1794

Query: 1775 CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAE 1834
            CQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKMAQKLAARNALA LKEKE AE
Sbjct: 1795 CQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEKEIAE 1854

Query: 1835 AKEKGDENGKKRKN------------GTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAH 1882
            +KEK   NG   +N            G QTFTRQTLNDICLR+NWPMP YRCV+EGGPAH
Sbjct: 1855 SKEK-RVNGNAVENQDDENGNANKKNGNQTFTRQTLNDICLRKNWPMPSYRCVKEGGPAH 1913

Query: 1883 AKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            AKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLL+LLNK YS
Sbjct: 1914 AKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLQLLNKTYS 1962


>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
          Length = 2024

 Score = 2816 bits (7300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1456/2103 (69%), Positives = 1641/2103 (78%), Gaps = 253/2103 (12%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCSS-DKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +S + DR   RKR R+ D+ G       ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAGNNK----KKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQ-------QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFD 401
            N+KML+VFLVPKVPLVYQ       QAEVIR QT + VGHYCGEMGQDFWD++RWQREF+
Sbjct: 294  NRKMLSVFLVPKVPLVYQVPPNKKHQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFE 353

Query: 402  TK--------------QVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLV 447
            +K              QVLVMTAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLV
Sbjct: 354  SKQFLKLTSFFLFSSTQVLVMTAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLV 413

Query: 448  MSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELE 507
            MSEFYHTT K+KRP++FGMTASPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELE
Sbjct: 414  MSEFYHTTPKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELE 473

Query: 508  KHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEEL 567
            KHVPMPSE+VVEYDKAA++WSLHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+EL
Sbjct: 474  KHVPMPSEIVVEYDKAATMWSLHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDEL 533

Query: 568  RQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDV 627
            RQVYGVSERTESDGAANLI KLRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DV
Sbjct: 534  RQVYGVSERTESDGAANLIHKLRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDV 593

Query: 628  KFQESYLSKVVSLLQCELVEGAVSKKDAKVV-DSENGFVEGGTNEIEEGELLDSHVVSGG 686
            KFQESYLS+VVSLLQCEL+EGA ++K A  V   ENG      +E+EEGEL D  VVSGG
Sbjct: 594  KFQESYLSEVVSLLQCELLEGAAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGG 650

Query: 687  EHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLP----KVFA 742
            EHVD +IGAAVADGKVTPKVQSLIK+LLKYQHT DFRAI+FVERVVAALVLP    KVFA
Sbjct: 651  EHVDEVIGAAVADGKVTPKVQSLIKLLLKYQHTADFRAIVFVERVVAALVLPKVRIKVFA 710

Query: 743  ELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVV 802
            ELPSLSF++ AS+IGHNNSQEM++ QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV
Sbjct: 711  ELPSLSFIRCASMIGHNNSQEMKSSQMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVV 770

Query: 803  IRFDLAKTVLAYIQSRGRARKPGSDYILMIE----------------------------- 833
            +RFDLAKTVLAYIQSRGRARKPGSDYILM+E                             
Sbjct: 771  MRFDLAKTVLAYIQSRGRARKPGSDYILMVERYIKSFKNYILIFVTTGHQISTDMSTCVT 830

Query: 834  -RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
             RGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+TGA+V
Sbjct: 831  CRGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEATGAMV 890

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
            SLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE LEGP
Sbjct: 891  SLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFEILEGP 950

Query: 953  VCSSMRLAQQA-VCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHR 1011
            VCSSMRLAQQ  + ++ACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGTARHR
Sbjct: 951  VCSSMRLAQQVDIIVSACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGTARHR 1010

Query: 1012 EFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFS 1071
            EFYPEGVAD+L+GEW+ SG++ C  SKLFHL+MY V+CV+ G SKDPFL++VS+FA+LF 
Sbjct: 1011 EFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFAILFG 1070

Query: 1072 SELDAE--------------------------------LASLKNFHVRLMSIVLDVDVEP 1099
            +ELDAE                                L+SLK FHVRLMSIVLDVDVEP
Sbjct: 1071 NELDAEVLSMSMDLYVARAMITKASLAFKGSLDITENQLSSLKKFHVRLMSIVLDVDVEP 1130

Query: 1100 YTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNER 1159
             TTPWDPAKAYLFVPV  + S++P+  ++W+LVEKITKT AW NPLQRARPDVYLGTNER
Sbjct: 1131 STTPWDPAKAYLFVPVTDNTSMEPIKGINWELVEKITKTTAWDNPLQRARPDVYLGTNER 1190

Query: 1160 TLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIH-NADM 1218
            TLGGDRREYGFGKLRH + FGQKSHPTYGIRGA+A FDVV+ASGL+P R+A +     D+
Sbjct: 1191 TLGGDRREYGFGKLRHNIVFGQKSHPTYGIRGAVASFDVVRASGLLPVRDAFEKEVEEDL 1250

Query: 1219 PTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSS 1278
              GKLMMAD C  A DL G+IVTAAHSGKRFYV+SI Y+M+AE+SFPRKEGYLGPLEY++
Sbjct: 1251 SKGKLMMADGCMVAEDLIGKIVTAAHSGKRFYVDSICYDMSAETSFPRKEGYLGPLEYNT 1310

Query: 1279 YADYYKQK--------------------------------YGVELIFKKQPLIRGRGVSY 1306
            YADYYKQK                                YGV+L  K+QPLI+GRGVSY
Sbjct: 1311 YADYYKQKIYVVQDRLFFYFLHNLRLLRLYKSSSIMLFIRYGVDLNCKQQPLIKGRGVSY 1370

Query: 1307 CKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVE 1366
            CKNLLSPRF    EQ GE E +LDKTYYVFLPPELC +HPL GSL+RGAQRLPSIMRRVE
Sbjct: 1371 CKNLLSPRF----EQSGESETVLDKTYYVFLPPELCVVHPLSGSLIRGAQRLPSIMRRVE 1426

Query: 1367 SMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1426
            SMLLA+QLK+ I+YP+P SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP
Sbjct: 1427 SMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1486

Query: 1427 QKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGD 1486
            QKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVFDEDTKDG 
Sbjct: 1487 QKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGG 1546

Query: 1487 SSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVY 1546
            SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVY
Sbjct: 1547 SSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVY 1601

Query: 1547 YVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            YVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF  LE ALK +FK++
Sbjct: 1602 YVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEK 1661

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVN
Sbjct: 1662 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVN 1721

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDR---------------------------QIRDFVK 1699
            NENFARVAVKHKLH++LRHGSSAL++                           QIR+FVK
Sbjct: 1722 NENFARVAVKHKLHLYLRHGSSALEKQVNKIKKQSILFSKSFKCLTVWLLFVFQIREFVK 1781

Query: 1700 EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            EV  E  KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL PMVT
Sbjct: 1782 EVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVT 1841

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLA 1819
            PETLPMHPVRELQERCQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKMAQKLA
Sbjct: 1842 PETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLA 1901

Query: 1820 ARNALAVLKEKETAEAKEKGDENGK-----------KRKNGTQTFTRQTLNDICLRRNWP 1868
            ARNALA LKEKE AE+KEK   NG             +KNG Q FTRQTLNDICLR+NWP
Sbjct: 1902 ARNALAALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWP 1961

Query: 1869 MPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            MP YRCV+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLNK
Sbjct: 1962 MPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 2021

Query: 1929 WYS 1931
             +S
Sbjct: 2022 TFS 2024


>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
 gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
          Length = 1543

 Score = 2761 bits (7158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1342/1543 (86%), Positives = 1426/1543 (92%), Gaps = 35/1543 (2%)

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
            MEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKRPSVFGMTASPVNLKGVSSQVDCA
Sbjct: 1    MEAINLLILDECHHAVKKHPYSLVMSEFYHTTLKEKRPSVFGMTASPVNLKGVSSQVDCA 60

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
            IKI NLESKLDS+VCTIKDRKELEKHVPMPSE+VVEYDKAA+LWSLHE++KQMEVAVEEA
Sbjct: 61   IKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEKIKQMEVAVEEA 120

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
            AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC
Sbjct: 121  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 180

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
            AYKVAQSFL ALQ+DERANYQLDVKFQESYL KVVSLLQC+L EGAV+ KD K  ++ENG
Sbjct: 181  AYKVAQSFLMALQSDERANYQLDVKFQESYLEKVVSLLQCQLTEGAVTDKDTKSPENENG 240

Query: 664  FVEGGTN--EIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
              + G++  +IEEGEL DSHVVSGGEHVDVIIGAAVADGKVTPKVQSL+KILLKYQHTED
Sbjct: 241  VAQAGSDPDDIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKILLKYQHTED 300

Query: 722  FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRV 781
            FRAIIFVERVVAALVLPKVFAELPSLSFV+ ASLIGHNNSQEMRT QMQ+TIAKFRDGRV
Sbjct: 301  FRAIIFVERVVAALVLPKVFAELPSLSFVRCASLIGHNNSQEMRTSQMQDTIAKFRDGRV 360

Query: 782  TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT 841
            TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGNLSH  
Sbjct: 361  TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNLSHGA 420

Query: 842  FLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLI 901
            FLRNARNSEETLR+EAIERTDLSHLKDTSRLISVD+VPGTVYQVESTGA+VSLNSAVGLI
Sbjct: 421  FLRNARNSEETLRREAIERTDLSHLKDTSRLISVDSVPGTVYQVESTGAIVSLNSAVGLI 480

Query: 902  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQ 961
            HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP N PFEKLEGP+CSSMRLAQ
Sbjct: 481  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPSNVPFEKLEGPLCSSMRLAQ 540

Query: 962  QAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADI 1021
            QAVCLAACKKLHEMGAFTDMLLPDKGSGE++E+VDQNDEGEPLPGTARHREFYPEGVA+I
Sbjct: 541  QAVCLAACKKLHEMGAFTDMLLPDKGSGEEREQVDQNDEGEPLPGTARHREFYPEGVANI 600

Query: 1022 LQGEWILSGRDGCTGS-KLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE--- 1077
            LQGEWIL GRDG   S KL HL+MY VKCVN+G SKDPFLTQVS+FAVLF +ELDAE   
Sbjct: 601  LQGEWILCGRDGWNNSNKLLHLYMYAVKCVNSGASKDPFLTQVSEFAVLFGNELDAEVLS 660

Query: 1078 -----------------------------LASLKNFHVRLMSIVLDVDVEPYTTPWDPAK 1108
                                         LASLK+FHVRLMSIVLDVDVEP TTPWDPAK
Sbjct: 661  MSMDLFIARTIITKASLVFRGPIDITENQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAK 720

Query: 1109 AYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREY 1168
            AYLFVP+V DK V+P+ E+DWDLVE + +TD W+NPLQRARPDVYLGTNERTLGGDRREY
Sbjct: 721  AYLFVPMVGDKFVNPIKEIDWDLVENVIRTDVWSNPLQRARPDVYLGTNERTLGGDRREY 780

Query: 1169 GFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADS 1228
            GFGKLRHGMAFGQKSHPTYGIRGA+AQFDVVKASGLVP+R  ++I   ++P GKLMMADS
Sbjct: 781  GFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRAGVEIQKVELPKGKLMMADS 840

Query: 1229 CANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYG 1288
               A +L GRIVTAAHSGKRFYV+SIRY+MTAE+SFPRKEGYLGPLEYSSYADYYKQKYG
Sbjct: 841  YVGAEELVGRIVTAAHSGKRFYVDSIRYDMTAENSFPRKEGYLGPLEYSSYADYYKQKYG 900

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            VEL+FK+QPLIRGRGVSYCKNLLSPRFEHS+  EGE EEILDKTYYVFLPPELC +HPLP
Sbjct: 901  VELMFKQQPLIRGRGVSYCKNLLSPRFEHSDSNEGESEEILDKTYYVFLPPELCLVHPLP 960

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELL 1408
            GSLVRGAQRLPSIMRRVESMLLAIQLKD I+Y VPA KILEALTAASCQETFCYERAELL
Sbjct: 961  GSLVRGAQRLPSIMRRVESMLLAIQLKDIIHYSVPALKILEALTAASCQETFCYERAELL 1020

Query: 1409 GDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR 1468
            GDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYAL KGLQSYIQADRFAPSR
Sbjct: 1021 GDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALIKGLQSYIQADRFAPSR 1080

Query: 1469 WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR 1528
            WAAPGVLPVFDEDTKDGDSSLFDQEKS+ E+K   D   + YEDD++EDGELE DSSSYR
Sbjct: 1081 WAAPGVLPVFDEDTKDGDSSLFDQEKSLIENKPKVDHADDGYEDDEIEDGELESDSSSYR 1140

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLR 1588
            VLSSKTLADVVEALIG+YYVEGGK AANHLM+WIGI+VE D EE+    RP+ VPES+LR
Sbjct: 1141 VLSSKTLADVVEALIGIYYVEGGKTAANHLMRWIGIKVEFDHEEIDSAIRPSNVPESILR 1200

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            S+DF ALE AL IKF+DRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+
Sbjct: 1201 SIDFDALEGALNIKFQDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFT 1260

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            YTNLPPGRLTDLRAAAVNNENFARVAV HKLHVHLRHGSSAL++QIRDFV+EV +EL KP
Sbjct: 1261 YTNLPPGRLTDLRAAAVNNENFARVAVNHKLHVHLRHGSSALEKQIRDFVREVQDELSKP 1320

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPV 1768
            GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT+VVW+VFQPLL PMVTPETLPMHPV
Sbjct: 1321 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPV 1380

Query: 1769 RELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            RELQERCQQQAEGLEYKA+RSGNLATVEV+IDGVQVGVAQNPQKKMAQKLAARNAL +LK
Sbjct: 1381 RELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQVGVAQNPQKKMAQKLAARNALVILK 1440

Query: 1829 EKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTY 1888
            +KETAEAKEKG++NGKK+KNG QTFTRQTLNDICLRRNWPMP YRCV EGGPAHAKRFT+
Sbjct: 1441 DKETAEAKEKGNDNGKKKKNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTF 1500

Query: 1889 AVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            AVRVNTTD+GWTDECVGEPMPSVKKAKDSAAVLLLELLNK YS
Sbjct: 1501 AVRVNTTDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKRYS 1543


>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
          Length = 1883

 Score = 2710 bits (7025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1331/1723 (77%), Positives = 1474/1723 (85%), Gaps = 92/1723 (5%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEA---NGINQECNGKVGKKSEAKEKMP 300
            RE RG+WERDR G   MVFR G+WE + +R  K A   +G + E   +  +   A+ + P
Sbjct: 204  REARGFWERDRGGK--MVFRSGTWEQESDREAKRARTQDGGSMEKKAEADRMGAAQREKP 261

Query: 301  --EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
              EE+AR YQL+VLEQAK +NTIAFLETGAGKTLIAVLLI+S+C+ + ++NKKMLAVFLV
Sbjct: 262  VAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLV 321

Query: 359  PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
            PKVPLVYQ                                      VLVMTAQILLNILR
Sbjct: 322  PKVPLVYQ--------------------------------------VLVMTAQILLNILR 343

Query: 419  HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            HSIIKM+AI+LLILDECHHAVKKHPYSLVMSEFYHTT KEKRP+VFGMTASPVNLKGV+S
Sbjct: 344  HSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTS 403

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
            Q DCAIKI NLESKLDSVVCTIKDRKELEKHVPMP EVVV+YDKAA+LWSLHEQ+KQME 
Sbjct: 404  QEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMES 463

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             VEEAA SSS+R+KWQFMGARDAG+++ELR VYGVSERTESDGAANLIQKLRAINYALGE
Sbjct: 464  TVEEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLIQKLRAINYALGE 523

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LGQWCAYKVAQSFLTALQNDERANYQ+DVKFQESYL KVV LL C+L EGA  K +   V
Sbjct: 524  LGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSETSDV 583

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
            + +N   +  TN++EEGEL DSH    GEHVD +IGAAVADGKVTP+VQ+LIKILLKYQH
Sbjct: 584  EMQNT-EKHNTNDLEEGELPDSH----GEHVDEVIGAAVADGKVTPRVQALIKILLKYQH 638

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRD 778
            TEDFRAIIFVERVV ALVLPKV AELPSLSF++ ASLIGHNN+QEMR  QMQ+TI+KFRD
Sbjct: 639  TEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNNQEMRACQMQDTISKFRD 698

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
            GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN+S
Sbjct: 699  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758

Query: 839  HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
            H TFLRNARNSEETLRKEA+ERTDLSHL  TS L  VD  PG++YQVESTGAVVSLNSAV
Sbjct: 759  HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVESTGAVVSLNSAV 818

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
            GLIHFYCSQLPSDRYSIL PEFIM+++EKPGG  EYSCKLQLPCNAPFEKLEGP+CSS+R
Sbjct: 819  GLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIR 878

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGV 1018
            LAQQAVCLAACKKLHEMGAFTD LLPD+GSGE  EK +QNDEGEPLPGTARHREFYPEGV
Sbjct: 879  LAQQAVCLAACKKLHEMGAFTDTLLPDRGSGE-GEKTEQNDEGEPLPGTARHREFYPEGV 937

Query: 1019 ADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAEL 1078
            ADIL+GEWILSGRDG   S+   L+MY+V CVN G SKDPF+TQ+S+FA++F +ELDAE+
Sbjct: 938  ADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNELDAEV 997

Query: 1079 AS--------------------------------LKNFHVRLMSIVLDVDVEPYTTPWDP 1106
             S                                LK+FHVRLMSIVLDVDV+P TTPWDP
Sbjct: 998  LSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTPWDP 1057

Query: 1107 AKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRR 1166
            AKAYLFVPV ++K  DP+ E+DW LV  I  TDAW NPLQRARPDVYLGTNERTLGGDRR
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 1167 EYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPT-GKLMM 1225
            EYGFGKLRHG AFGQK+HPTYGIRGAIA+FD+VKASGLVP R+  + H +D    GKL M
Sbjct: 1118 EYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARD--RGHFSDYQNQGKLFM 1175

Query: 1226 ADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ 1285
            ADSC NA DL G +VTAAHSGKRFYV+ I Y M AE+SFPRKEGYLGPLEYSSYADYYKQ
Sbjct: 1176 ADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQ 1235

Query: 1286 KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            KYGVELI++KQPLIR RGVSYCKNLLSPRFEHS+ +EG+  E LDKTYYV+LPPELC +H
Sbjct: 1236 KYGVELIYRKQPLIRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELCLVH 1295

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
            PLPGSLVRGAQRLPSIMRRVESMLLA+QLKD I+YPVPA+KILEALTAASCQET CYERA
Sbjct: 1296 PLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIIDYPVPATKILEALTAASCQETLCYERA 1355

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYAL+K LQSYIQADRFA
Sbjct: 1356 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFA 1415

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            PSRWAAPGVLPVFDE++++ + S+FD+E +  E +    ++Y++Y D+  EDGE+EGDSS
Sbjct: 1416 PSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQ---KESYDDYADNMQEDGEIEGDSS 1472

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
             YRVLSSKTLADVVEALIGVYYV GGK AANHLMKWIGI  E DPEE+  P +P  +PES
Sbjct: 1473 CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIP-PPKPYDIPES 1531

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            ++RS++F  L+  L I+F+++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HL
Sbjct: 1532 IMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 1591

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL+ QIR+FVK+V EEL
Sbjct: 1592 FFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEEL 1651

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
            LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG DTSVVW+VFQPLL PMVTPETLPM
Sbjct: 1652 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM 1711

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+GVAQNPQKKMAQKLAARNAL 
Sbjct: 1712 HPVRELQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALV 1771

Query: 1826 VLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKR 1885
            VLKEKETA  KE  DE   ++KNG Q FTRQTLNDICLRR WPMP YRCV EGGPAHAKR
Sbjct: 1772 VLKEKETATKKE--DERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKR 1829

Query: 1886 FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            F Y+VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+
Sbjct: 1830 FVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 1872


>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
            Full=Dicer-like protein 1; Short=OsDCL1
 gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
 gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
            sativa Japonica Group]
          Length = 1883

 Score = 2710 bits (7025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1331/1723 (77%), Positives = 1474/1723 (85%), Gaps = 92/1723 (5%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEA---NGINQECNGKVGKKSEAKEKMP 300
            RE RG+WERDR G   MVFR G+WE + +R  K A   +G + E   +  +   A+ + P
Sbjct: 204  REARGFWERDRGGK--MVFRSGTWEQESDREAKRARTQDGGSMEKKAEADRMGAAQREKP 261

Query: 301  --EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
              EE+AR YQL+VLEQAK +NTIAFLETGAGKTLIAVLLI+S+C+ + ++NKKMLAVFLV
Sbjct: 262  VAEERARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLV 321

Query: 359  PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
            PKVPLVYQ                                      VLVMTAQILLNILR
Sbjct: 322  PKVPLVYQ--------------------------------------VLVMTAQILLNILR 343

Query: 419  HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            HSIIKM+AI+LLILDECHHAVKKHPYSLVMSEFYHTT KEKRP+VFGMTASPVNLKGV+S
Sbjct: 344  HSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTS 403

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
            Q DCAIKI NLESKLDSVVCTIKDRKELEKHVPMP EVVV+YDKAA+LWSLHEQ+KQME 
Sbjct: 404  QEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMES 463

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             VEEAA SSS+R+KWQFMGARDAG+++ELR VYGVSERTESDGAANLIQKLRAINYALGE
Sbjct: 464  TVEEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLIQKLRAINYALGE 523

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LGQWCAYKVAQSFLTALQNDERANYQ+DVKFQESYL KVV LL C+L EGA  K +   V
Sbjct: 524  LGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSETSDV 583

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
            + +N   +  TN++EEGEL DSH    GEHVD +IGAAVADGKVTP+VQ+LIKILLKYQH
Sbjct: 584  EMQNT-EKHNTNDLEEGELPDSH----GEHVDEVIGAAVADGKVTPRVQALIKILLKYQH 638

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRD 778
            TEDFRAIIFVERVV ALVLPKV AELPSLSF++ ASLIGHNN+QEMR  QMQ+TI+KFRD
Sbjct: 639  TEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNNQEMRACQMQDTISKFRD 698

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
            GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN+S
Sbjct: 699  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758

Query: 839  HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
            H TFLRNARNSEETLRKEA+ERTDLSHL  TS L  VD  PG++YQVESTGAVVSLNSAV
Sbjct: 759  HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVESTGAVVSLNSAV 818

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
            GLIHFYCSQLPSDRYSIL PEFIM+++EKPGG  EYSCKLQLPCNAPFEKLEGP+CSS+R
Sbjct: 819  GLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIR 878

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGV 1018
            LAQQAVCLAACKKLHEMGAFTD LLPD+GSGE  EK +QNDEGEPLPGTARHREFYPEGV
Sbjct: 879  LAQQAVCLAACKKLHEMGAFTDTLLPDRGSGE-GEKTEQNDEGEPLPGTARHREFYPEGV 937

Query: 1019 ADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAEL 1078
            ADIL+GEWILSGRDG   S+   L+MY+V CVN G SKDPF+TQ+S+FA++F +ELDAE+
Sbjct: 938  ADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDPFVTQLSNFAIIFGNELDAEV 997

Query: 1079 AS--------------------------------LKNFHVRLMSIVLDVDVEPYTTPWDP 1106
             S                                LK+FHVRLMSIVLDVDV+P TTPWDP
Sbjct: 998  LSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTPWDP 1057

Query: 1107 AKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRR 1166
            AKAYLFVPV ++K  DP+ E+DW LV  I  TDAW NPLQRARPDVYLGTNERTLGGDRR
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNNIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 1167 EYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPT-GKLMM 1225
            EYGFGKLRHG AFGQK+HPTYGIRGAIA+FD+VKASGLVP R+  + H +D    GKL M
Sbjct: 1118 EYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARD--RGHFSDYQNQGKLFM 1175

Query: 1226 ADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ 1285
            ADSC NA DL G +VTAAHSGKRFYV+ I Y M AE+SFPRKEGYLGPLEYSSYADYYKQ
Sbjct: 1176 ADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQ 1235

Query: 1286 KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            KYGVELI++KQPLIR RGVSYCKNLLSPRFEHS+ +EG+  E LDKTYYV+LPPELC +H
Sbjct: 1236 KYGVELIYRKQPLIRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELCLVH 1295

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
            PLPGSLVRGAQRLPSIMRRVESMLLA+QLKD I+YPVPA+KILEALTAASCQET CYERA
Sbjct: 1296 PLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIIDYPVPATKILEALTAASCQETLCYERA 1355

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYAL+K LQSYIQADRFA
Sbjct: 1356 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFA 1415

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            PSRWAAPGVLPVFDE++++ + S+FD+E +  E +    ++Y++Y D+  EDGE+EGDSS
Sbjct: 1416 PSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQ---KESYDDYADNMQEDGEIEGDSS 1472

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
             YRVLSSKTLADVVEALIGVYYV GGK AANHLMKWIGI  E DPEE+  P +P  +PES
Sbjct: 1473 CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIP-PPKPYDIPES 1531

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            ++RS++F  L+  L I+F+++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HL
Sbjct: 1532 IMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 1591

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL+ QIR+FVK+V EEL
Sbjct: 1592 FFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEEL 1651

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
            LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG DTSVVW+VFQPLL PMVTPETLPM
Sbjct: 1652 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM 1711

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+GVAQNPQKKMAQKLAARNAL 
Sbjct: 1712 HPVRELQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALV 1771

Query: 1826 VLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKR 1885
            VLKEKETA  KE  DE   ++KNG Q FTRQTLNDICLRR WPMP YRCV EGGPAHAKR
Sbjct: 1772 VLKEKETATKKE--DERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKR 1829

Query: 1886 FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            F Y+VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+
Sbjct: 1830 FVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 1872


>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
          Length = 1883

 Score = 2709 bits (7023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1331/1723 (77%), Positives = 1473/1723 (85%), Gaps = 92/1723 (5%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEA---NGINQECNGKVGKKSEAKEKMP 300
            RE RG+WERDR G   MVFR G+WE + +R  K A   +G + E   +  +   A+ + P
Sbjct: 204  REARGFWERDRGGK--MVFRSGTWEQESDREAKRARTQDGGSMEKKAEADRMGAAQREKP 261

Query: 301  --EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
              EE AR YQL+VLEQAK +NTIAFLETGAGKTLIAVLLI+S+C+ + ++NKKMLAVFLV
Sbjct: 262  VAEEHARQYQLEVLEQAKSRNTIAFLETGAGKTLIAVLLIKSVCDKMLKENKKMLAVFLV 321

Query: 359  PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
            PKVPLVYQ                                      VLVMTAQILLNILR
Sbjct: 322  PKVPLVYQ--------------------------------------VLVMTAQILLNILR 343

Query: 419  HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            HSIIKM+AI+LLILDECHHAVKKHPYSLVMSEFYHTT KEKRP+VFGMTASPVNLKGV+S
Sbjct: 344  HSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTS 403

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
            Q DCAIKI NLESKLDSVVCTIKDRKELEKHVPMP EVVV+YDKAA+LWSLHEQ+KQME 
Sbjct: 404  QEDCAIKIRNLESKLDSVVCTIKDRKELEKHVPMPLEVVVQYDKAATLWSLHEQIKQMES 463

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             VEEAA SSS+R+KWQFMGARDAG+++ELR VYGVSERTESDGAANLIQKLRAINYALGE
Sbjct: 464  TVEEAALSSSKRTKWQFMGARDAGSRDELRLVYGVSERTESDGAANLIQKLRAINYALGE 523

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LGQWCAYKVAQSFLTALQNDERANYQ+DVKFQESYL KVV LL C+L EGA  K +   V
Sbjct: 524  LGQWCAYKVAQSFLTALQNDERANYQVDVKFQESYLKKVVDLLHCQLTEGAAMKSETSDV 583

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
            + +N   +  TN++EEGEL DSH    GEHVD +IGAAVADGKVTP+VQ+LIKILLKYQH
Sbjct: 584  EMQNT-EKHNTNDLEEGELPDSH----GEHVDEVIGAAVADGKVTPRVQALIKILLKYQH 638

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRD 778
            TEDFRAIIFVERVV ALVLPKV AELPSLSF++ ASLIGHNN+QEMR  QMQ+TI+KFRD
Sbjct: 639  TEDFRAIIFVERVVTALVLPKVLAELPSLSFIRCASLIGHNNNQEMRACQMQDTISKFRD 698

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
            GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN+S
Sbjct: 699  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNIS 758

Query: 839  HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
            H TFLRNARNSEETLRKEA+ERTDLSHL  TS L  VD  PG++YQVESTGAVVSLNSAV
Sbjct: 759  HETFLRNARNSEETLRKEAMERTDLSHLDGTSVLSPVDTSPGSMYQVESTGAVVSLNSAV 818

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
            GLIHFYCSQLPSDRYSIL PEFIM+++EKPGG  EYSCKLQLPCNAPFEKLEGP+CSS+R
Sbjct: 819  GLIHFYCSQLPSDRYSILHPEFIMQKYEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIR 878

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGV 1018
            LAQQAVCLAACKKLHEMGAFTD LLPD+GSGE  EK +QNDEGEPLPGTARHREFYPEGV
Sbjct: 879  LAQQAVCLAACKKLHEMGAFTDTLLPDRGSGE-GEKTEQNDEGEPLPGTARHREFYPEGV 937

Query: 1019 ADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAEL 1078
            ADIL+GEWILSGRDG   S+   L+MY+V CVN G SKD F+TQ+S+FA++F +ELDAE+
Sbjct: 938  ADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTSKDSFVTQLSNFAIIFGNELDAEV 997

Query: 1079 AS--------------------------------LKNFHVRLMSIVLDVDVEPYTTPWDP 1106
             S                                LK+FHVRLMSIVLDVDV+P TTPWDP
Sbjct: 998  LSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKSFHVRLMSIVLDVDVDPSTTPWDP 1057

Query: 1107 AKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRR 1166
            AKAYLFVPV ++K  DP+ E+DW LV  I  TDAW NPLQRARPDVYLGTNERTLGGDRR
Sbjct: 1058 AKAYLFVPVGAEKCTDPLREIDWTLVNYIVNTDAWNNPLQRARPDVYLGTNERTLGGDRR 1117

Query: 1167 EYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPT-GKLMM 1225
            EYGFGKLRHG AFGQK+HPTYGIRGAIA+FD+VKASGLVP R+  + H +D    GKL M
Sbjct: 1118 EYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDIVKASGLVPARD--RGHFSDYQNQGKLFM 1175

Query: 1226 ADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ 1285
            ADSC NA DL G +VTAAHSGKRFYV+ I Y M AE+SFPRKEGYLGPLEYSSYADYYKQ
Sbjct: 1176 ADSCWNAKDLAGMVVTAAHSGKRFYVDCICYNMNAENSFPRKEGYLGPLEYSSYADYYKQ 1235

Query: 1286 KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            KYGVELI++KQPLIR RGVSYCKNLLSPRFEHS+ +EG+  E LDKTYYV+LPPELC +H
Sbjct: 1236 KYGVELIYRKQPLIRARGVSYCKNLLSPRFEHSDAREGDFSENLDKTYYVYLPPELCLVH 1295

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
            PLPGSLVRGAQRLPSIMRRVESMLLA+QLKD I+YPVPA+KILEALTAASCQETFCYERA
Sbjct: 1296 PLPGSLVRGAQRLPSIMRRVESMLLAVQLKDIIDYPVPATKILEALTAASCQETFCYERA 1355

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYAL+K LQSYIQADRFA
Sbjct: 1356 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQADRFA 1415

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            PSRWAAPGVLPVFDE++++ + S+FD+E +  E +    ++Y++Y D+  EDGE+EGDSS
Sbjct: 1416 PSRWAAPGVLPVFDEESREYEPSIFDEESTGCELQ---KESYDDYADNMQEDGEIEGDSS 1472

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
             YRVLSSKTLADVVEALIGVYYV GGK AANHLMKWIGI  E DPEE+  P +P  +PES
Sbjct: 1473 CYRVLSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGIHAELDPEEIP-PPKPYDIPES 1531

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            ++RS++F  L+  L I+F+++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HL
Sbjct: 1532 IMRSINFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 1591

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL+ QIR+FVK+V EEL
Sbjct: 1592 FFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEEL 1651

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
            LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG DTSVVW+VFQPLL PMVTPETLPM
Sbjct: 1652 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM 1711

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+GVAQNPQKKMAQKLAARNAL 
Sbjct: 1712 HPVRELQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALV 1771

Query: 1826 VLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKR 1885
            VLKEKETA  KE  DE   ++KNG Q FTRQTLNDICLRR WPMP YRCV EGGPAHAKR
Sbjct: 1772 VLKEKETATKKE--DERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKR 1829

Query: 1886 FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            F Y+VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+
Sbjct: 1830 FVYSVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 1872


>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
          Length = 1690

 Score = 2704 bits (7008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1342/1696 (79%), Positives = 1474/1696 (86%), Gaps = 62/1696 (3%)

Query: 284  ECNGKVGKKS-EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC 342
            E +G + KK  + KE+ P+EQAR YQLDVLE A+KK TIAFLETGAGKTLIA+LL++S+C
Sbjct: 9    EPSGAIEKKDVKPKEQAPKEQARKYQLDVLEHARKKXTIAFLETGAGKTLIAILLMKSLC 68

Query: 343  NDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMG-QDFWDAQRWQREFD 401
            NDL +QNKKMLAVFLVPKVPLVYQQAEVIREQTGY VGHYCGEMG + F  A+RWQREF+
Sbjct: 69   NDLHKQNKKMLAVFLVPKVPLVYQQAEVIREQTGYQVGHYCGEMGPRIFGIARRWQREFE 128

Query: 402  TKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRP 461
            TKQVLVMTAQILLNILRHSIIKMEAINLLI+DECHHAVKKHPYSLVMSEFYHTT K K  
Sbjct: 129  TKQVLVMTAQILLNILRHSIIKMEAINLLIMDECHHAVKKHPYSLVMSEFYHTTQKAKGH 188

Query: 462  SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
                MTASPVNLKGVSSQVDCAIKI NLE+KLDSVV TIKDRK+LEKHVPMPSEVVVEYD
Sbjct: 189  LFLAMTASPVNLKGVSSQVDCAIKIRNLETKLDSVVFTIKDRKDLEKHVPMPSEVVVEYD 248

Query: 522  KAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
            KAASLWSLHEQ+KQME AVEEAAQSSSRRSKWQFMGARDAGA+EELRQVYGVSERTESDG
Sbjct: 249  KAASLWSLHEQIKQMESAVEEAAQSSSRRSKWQFMGARDAGAREELRQVYGVSERTESDG 308

Query: 582  AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
            AANLIQKLRAINYALGELGQWCAYKVA+SFLTALQNDERA+YQLDVKFQESYL KVVSLL
Sbjct: 309  AANLIQKLRAINYALGELGQWCAYKVARSFLTALQNDERASYQLDVKFQESYLDKVVSLL 368

Query: 642  QCELVEGAVSKKDAKVVDSENGFVEGGTN---------EIEEGELLDSHVVSGGEHVDVI 692
            QC+L EGAV+         ENG ++ G N         E+EEGELL+SHVVS GEHVD  
Sbjct: 369  QCQLSEGAVA---------ENGKMDEGNNPNNDCDRPDEMEEGELLESHVVSSGEHVDAT 419

Query: 693  IGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKS 752
            +GAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVV ALVLPKVF ELPSLSF+ S
Sbjct: 420  LGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVTALVLPKVFEELPSLSFITS 479

Query: 753  ASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            +SLIGHNNSQEMRT QMQ+TIAKFRDGR+ LLVATSVAEEGLDIRQCNVVIRFDLAKT+L
Sbjct: 480  SSLIGHNNSQEMRTGQMQDTIAKFRDGRMNLLVATSVAEEGLDIRQCNVVIRFDLAKTIL 539

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL 872
            AYIQSRGRARKPGSDYILM+ER NLSH  FLRNARNSEETLRKEAIERTD+SHLK  S+L
Sbjct: 540  AYIQSRGRARKPGSDYILMVERDNLSHEAFLRNARNSEETLRKEAIERTDISHLKGASKL 599

Query: 873  ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            IS +A   +VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT
Sbjct: 600  ISGEAPTDSVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 659

Query: 933  EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
            EYSC+LQLPCNAPFEKLEGPVCSSMRLAQQAVCL ACKKLH+MGAFTDMLLPDKGSG + 
Sbjct: 660  EYSCRLQLPCNAPFEKLEGPVCSSMRLAQQAVCLDACKKLHQMGAFTDMLLPDKGSGAEL 719

Query: 993  EKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNN 1052
            EKV+Q+DEG+P+PGT+RHREFYPEGVADIL+GEWILSG+D C  SKL HL+MY +KCVN 
Sbjct: 720  EKVEQDDEGDPIPGTSRHREFYPEGVADILKGEWILSGKDSCDSSKLVHLYMYAIKCVNI 779

Query: 1053 GISKDPFLTQVSDFAVLFSSELDAE--------------------------------LAS 1080
            G SKDPFLT VS+FA+LF +ELDAE                                LAS
Sbjct: 780  GTSKDPFLTDVSEFAILFGNELDAEVLSMSMDLFIARTVETKATLVFRGPIEVTESKLAS 839

Query: 1081 LKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDA 1140
            LK+FHVR+MSIVLDVDVEP TTPWDPAKAYLF PV  D+S DP+ +++WDL++KITKTD 
Sbjct: 840  LKSFHVRMMSIVLDVDVEPSTTPWDPAKAYLFAPVTGDESGDPIKDINWDLIKKITKTDV 899

Query: 1141 WTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVK 1200
            W+NPLQ+ARPDVYLGT+ER LGGDRREYGF KLRHGMAFG KSHPTYG+RGAIA FDVVK
Sbjct: 900  WSNPLQKARPDVYLGTSERALGGDRREYGFAKLRHGMAFGLKSHPTYGVRGAIANFDVVK 959

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            ASGLVP R ++ +   D+   K+MMAD C  A D+ GRIVTAAHSGKRFYV+ I  +MTA
Sbjct: 960  ASGLVPHRSSLDLVEVDLSKDKIMMADCCLRAEDIVGRIVTAAHSGKRFYVDCIPNDMTA 1019

Query: 1261 ESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEE 1320
            E+SFPRKEGYLGPLEYSSYA YYKQKYGV+L++KKQPL+RGRGVSYCKNLLSPRFEHSEE
Sbjct: 1020 ENSFPRKEGYLGPLEYSSYAAYYKQKYGVDLVYKKQPLLRGRGVSYCKNLLSPRFEHSEE 1079

Query: 1321 QEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY 1380
             EGE EE  DKTYYVFLPPELCF+HPLPGSLVRGAQRLPSIMRRVESMLLA+QLKD I Y
Sbjct: 1080 HEGELEEATDKTYYVFLPPELCFLHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDMIGY 1139

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            PVPA KILEALTAASCQETFCYERAELLGDAYLKWVVSR+LFLKYPQKHEGQLTRMRQQM
Sbjct: 1140 PVPALKILEALTAASCQETFCYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQM 1199

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQE----KSV 1496
            VSN+VLYQYAL+KGLQSYIQADRF+PSRWAAPGVLPV+DEDT + +SS+F  E     +V
Sbjct: 1200 VSNMVLYQYALNKGLQSYIQADRFSPSRWAAPGVLPVYDEDTNEEESSMFGNEIIENGTV 1259

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
            A   L  D+  +E  ++       + DS SYRVLSSKT+ADVVEALIGVYYV+GGK AAN
Sbjct: 1260 AAKTLAADEFEDEEAEEGEL----DTDSGSYRVLSSKTMADVVEALIGVYYVDGGKYAAN 1315

Query: 1557 HLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHA 1616
            H MKWIG++V+ D +E     RP  +PE+VLRSVDF  L+ AL I F D+GLL+EAITHA
Sbjct: 1316 HFMKWIGVEVDFDFKETEYSIRPYSIPENVLRSVDFDKLQGALNISFNDKGLLLEAITHA 1375

Query: 1617 SRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
            SRPSSGVSCYQRLEFVGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVK
Sbjct: 1376 SRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVK 1435

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIF 1736
            H LH+HLRHGSSAL++QIRDFV EV  EL KPGFNSFGLGDCKAPKVLGDI ESIAGAIF
Sbjct: 1436 HGLHLHLRHGSSALEKQIRDFVIEVKNELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIF 1495

Query: 1737 LDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVE 1796
            LDSG DT+VVW+VFQPLL PMVTPETLPMHPVRELQERCQQQA+GLEYKASRSGN+ATVE
Sbjct: 1496 LDSGCDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAQGLEYKASRSGNIATVE 1555

Query: 1797 VYIDGVQVGVAQNPQK-KMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTR 1855
            VY+DG+QVG+AQNPQK KMAQK+  +     + EK   + K +  + G+K+KNG  ++TR
Sbjct: 1556 VYVDGIQVGMAQNPQKRKMAQKVGCQECPCCV-EKRGRKPKLRRLKMGRKKKNGNPSYTR 1614

Query: 1856 QTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAK 1915
            QTLNDICLRRNWPMPLYR V EGGPAHAKRFTY VRVNT+DKGWTDEC+GEPMPSVKKAK
Sbjct: 1615 QTLNDICLRRNWPMPLYRSVHEGGPAHAKRFTYGVRVNTSDKGWTDECIGEPMPSVKKAK 1674

Query: 1916 DSAAVLLLELLNKWYS 1931
            DSAA LLLELLN+WYS
Sbjct: 1675 DSAASLLLELLNRWYS 1690


>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
            distachyon]
          Length = 1888

 Score = 2648 bits (6863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1311/1757 (74%), Positives = 1458/1757 (82%), Gaps = 118/1757 (6%)

Query: 216  RRDRDPMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAG 275
            +RDRD     EH+               RE RG+WERDR G   MVFR G+WE + +R  
Sbjct: 193  KRDRDGHSGSEHHR--------------REARGFWERDRGGK--MVFRPGTWEKESDREA 236

Query: 276  KEANGINQECNGKVGKKSEA--------KEKMPEEQARPYQLDVLEQAKKKNTIAFLETG 327
            K A     +  G V KK+EA         + + EEQAR YQL+VLEQAK +NTIAFLETG
Sbjct: 237  KRAR---TQDGGSVEKKAEADRAGAAQRAKPVAEEQARHYQLEVLEQAKSRNTIAFLETG 293

Query: 328  AGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMG 387
            AGKTLIAVLLI+SIC+ + ++NKKMLAVFLVPKVPLVYQ                     
Sbjct: 294  AGKTLIAVLLIKSICDKMLKENKKMLAVFLVPKVPLVYQ--------------------- 332

Query: 388  QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLV 447
                             VLVMTAQILLNILRHSIIKM+AI+LLILDECHHAVKKHPYSLV
Sbjct: 333  -----------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLV 375

Query: 448  MSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELE 507
            MSEFYHTT K+KRP VFGMTASPVNLKGV+SQ DCAIKI NLESKLDSVVCTIKDRKELE
Sbjct: 376  MSEFYHTTPKDKRPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELE 435

Query: 508  KHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEEL 567
            KHVPMP EVV+ YDKAA+L SLHE++KQME AVEEAA SSS+R++WQFMGARDAG++EEL
Sbjct: 436  KHVPMPFEVVIHYDKAATLCSLHERIKQMEAAVEEAALSSSKRTRWQFMGARDAGSREEL 495

Query: 568  RQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDV 627
            R VYGVSERTESDGAANLIQKLRAINY LGELGQWCAYKVAQSFLTALQNDERANYQ+DV
Sbjct: 496  RLVYGVSERTESDGAANLIQKLRAINYGLGELGQWCAYKVAQSFLTALQNDERANYQVDV 555

Query: 628  KFQESYLSKVVSLLQCELVEGAVSK---KDAKVVDSENGFVEGGTNEIEEGELLDSHVVS 684
            KFQESYL KVV LL C+L EGA  K    D ++  +EN      ++E+E+GEL DSH   
Sbjct: 556  KFQESYLKKVVDLLHCQLTEGAAMKSETNDVEMHSTENH----NSSELEDGELPDSH--- 608

Query: 685  GGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL 744
             GEHVD +IGAAVADGKVTP+VQ+LIKILLKYQHTEDFRAIIFVERVV ALVLPKVFAEL
Sbjct: 609  -GEHVDEVIGAAVADGKVTPRVQALIKILLKYQHTEDFRAIIFVERVVTALVLPKVFAEL 667

Query: 745  PSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIR 804
            PSLSF++ ASLIGHNN+QEMRT QMQ+TIAKFRDGR+TLLVATSVAEEGLDIRQCNVVIR
Sbjct: 668  PSLSFIRCASLIGHNNNQEMRTSQMQDTIAKFRDGRITLLVATSVAEEGLDIRQCNVVIR 727

Query: 805  FDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLS 864
            FDLAKTVLAYIQSRGRARKPGSDYILM+ER NLSH TFLRNARNSEETLRKEAIERTDLS
Sbjct: 728  FDLAKTVLAYIQSRGRARKPGSDYILMVERANLSHETFLRNARNSEETLRKEAIERTDLS 787

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
            HL     L  +   P ++YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM++
Sbjct: 788  HLDGIPMLNPIHTSPDSMYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMQK 847

Query: 925  HEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            HEKPGG  EYSCKLQLPCNAPFEKLEGP+CSS+RLAQQAVCLAACKKLHEM AFTDMLLP
Sbjct: 848  HEKPGGSVEYSCKLQLPCNAPFEKLEGPICSSIRLAQQAVCLAACKKLHEMSAFTDMLLP 907

Query: 985  DKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
            D+G GE  EK +QNDEG+P+PGTARHREFYPEGVA++L+GEWILSGRD C  S+   L+M
Sbjct: 908  DRGIGE-GEKTEQNDEGDPVPGTARHREFYPEGVAEVLRGEWILSGRDCCQSSQFIKLYM 966

Query: 1045 YTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS------------------------ 1080
            Y V CV+ G SKDPFL Q+S+F+++F +ELDAE+ S                        
Sbjct: 967  YYVNCVDVGTSKDPFLAQLSNFSIVFGNELDAEVLSMTMDLFVAKTMITKASLVFHGPIE 1026

Query: 1081 --------LKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLV 1132
                    LK+FHVRLMSIVLDVDV+P TTPWDPAKAYLFVPV ++K  D   E+DW LV
Sbjct: 1027 ITERQLVLLKSFHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDAFREIDWTLV 1086

Query: 1133 EKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGA 1192
              I  TDAW NPLQ+ARPDVYLGTNERTLGGDRREYGFGKLR+G  FGQK+HPTYGIRGA
Sbjct: 1087 NSIVNTDAWNNPLQKARPDVYLGTNERTLGGDRREYGFGKLRNGTTFGQKAHPTYGIRGA 1146

Query: 1193 IAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVE 1252
            IA+FDVVKASGLVP R+   + N     GKL MADSC +A DL G +VTAAHSGKRFYV+
Sbjct: 1147 IAEFDVVKASGLVPARDRGFL-NDSQKHGKLFMADSCWDAKDLAGMVVTAAHSGKRFYVD 1205

Query: 1253 SIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLS 1312
            SI Y M AE+SFPRKEGYLGPLEYSSYADYYKQKYGVEL++ KQPLIR RGVSYCKNLLS
Sbjct: 1206 SICYNMNAENSFPRKEGYLGPLEYSSYADYYKQKYGVELVYTKQPLIRARGVSYCKNLLS 1265

Query: 1313 PRFEHSEEQEGEG-EEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLA 1371
            PRFEHSE +EG    E  DKTYYV+LPPELC +HPLPGSLVRGAQRLPSIMRRVESMLLA
Sbjct: 1266 PRFEHSEAKEGVNFSENHDKTYYVYLPPELCVVHPLPGSLVRGAQRLPSIMRRVESMLLA 1325

Query: 1372 IQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
            +QLK+ I+YPVPA+KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG
Sbjct: 1326 VQLKEIIDYPVPATKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1385

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
            QLTRMRQQMVSN+VLYQ+AL+K LQSYIQADRFAPSRWAAPGVLPVFDE+T++ + S+F 
Sbjct: 1386 QLTRMRQQMVSNMVLYQFALNKTLQSYIQADRFAPSRWAAPGVLPVFDEETRESEPSIFG 1445

Query: 1492 QEKSVAEDKLGTDKNY-NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
            +E  +  +     K++ ++Y D   EDGE++GDS  YRVLSSKTLADVVEALIGVYYV G
Sbjct: 1446 EEPVLGNE---VQKDFDDDYADSIQEDGEIDGDSGCYRVLSSKTLADVVEALIGVYYVAG 1502

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            GK AANHLMKWIGI  E DP+E+  P +   +P+S++RS++F  LE  + IKF+++G LV
Sbjct: 1503 GKIAANHLMKWIGIHAELDPQEIP-PPKIYNIPDSIMRSINFDTLESIMGIKFQNKGFLV 1561

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFF+YT+LPPGRLTDLRAAAVNNENF
Sbjct: 1562 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRAAAVNNENF 1621

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVES 1730
            ARVAVKHKLHVHLRHGSSAL+ QIR+FVK+V EE+ K GFNSFGLGDCKAPKVLGDI+ES
Sbjct: 1622 ARVAVKHKLHVHLRHGSSALETQIREFVKDVREEISKSGFNSFGLGDCKAPKVLGDIIES 1681

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG 1790
            IAGAIFLDSG DTS VW+VFQPLLDPMVTPETLPMHP+RELQERCQQQAEGLEYKASR+G
Sbjct: 1682 IAGAIFLDSGYDTSAVWKVFQPLLDPMVTPETLPMHPIRELQERCQQQAEGLEYKASRAG 1741

Query: 1791 NLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGT 1850
            N+ATVEV++DG+Q+GVAQNPQKKMAQKLAARNAL VLKEKE+AEAKE   E    +KNG 
Sbjct: 1742 NVATVEVFVDGIQIGVAQNPQKKMAQKLAARNALVVLKEKESAEAKET--EKDDDKKNGA 1799

Query: 1851 QTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPS 1910
              FTRQTLNDICLRR WPMP YRC+ EGGPAHAKRF YAVRVNT+D+GWTDEC+GEPMPS
Sbjct: 1800 HVFTRQTLNDICLRRQWPMPQYRCINEGGPAHAKRFVYAVRVNTSDRGWTDECIGEPMPS 1859

Query: 1911 VKKAKDSAAVLLLELLN 1927
            VKKAKDSAAVLLLELLN
Sbjct: 1860 VKKAKDSAAVLLLELLN 1876


>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
 gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
          Length = 1662

 Score = 2420 bits (6272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1193/1658 (71%), Positives = 1355/1658 (81%), Gaps = 67/1658 (4%)

Query: 318  KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGY 377
            KNTIAFLETGAGKTLIAVLL++     L+ Q ++MLAVFLVPKVPLVYQQAEVIR  T +
Sbjct: 2    KNTIAFLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61

Query: 378  VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHH 437
            VVGHYCGEMGQDFWDA+RWQREFDT+ + VMTAQILLNILRHSI++MEAI+LLILDECHH
Sbjct: 62   VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121

Query: 438  AVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV 497
            AVKKHPYSLVMSEFYH T K+KRP VFGMTASPVNLKGVS+Q DCAIKI NLESKLDS+V
Sbjct: 122  AVKKHPYSLVMSEFYHVTPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLDSIV 181

Query: 498  CTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMG 557
            CTIKDRKELEKHVPMPSE++V YDK A L+SL E++K ME  VEEAA +S RRSKW+FMG
Sbjct: 182  CTIKDRKELEKHVPMPSEIMVLYDKPALLFSLREEIKLMESTVEEAANASVRRSKWKFMG 241

Query: 558  ARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQN 617
            ARDAGAKEELR VYGV+ERTESDGAA+L QKLRAI YAL ELGQWCAYKV+ ++LT+L+N
Sbjct: 242  ARDAGAKEELRLVYGVAERTESDGAASLSQKLRAIIYALDELGQWCAYKVSLTYLTSLRN 301

Query: 618  DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNE----IE 673
            DER ++QLDVKFQE YL KV +LL+C L EGAV+ K A     E+  VEG   +    +E
Sbjct: 302  DERISHQLDVKFQEMYLKKVCALLRCNLHEGAVASK-APAEIGESVAVEGDKAQDPMDVE 360

Query: 674  EGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVA 733
            EGEL DS  VS GEHVD I+GAAVADGKVTPKVQSLIKILL+YQHT+DFRAIIFVERVVA
Sbjct: 361  EGELPDSQAVSVGEHVDEILGAAVADGKVTPKVQSLIKILLRYQHTDDFRAIIFVERVVA 420

Query: 734  ALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEG 793
            A VLPKVFAELPSL FVK ASLIGHNN+Q+MRT QMQETI++FRDGRVTLLVATSVAEEG
Sbjct: 421  AQVLPKVFAELPSLKFVKCASLIGHNNNQDMRTRQMQETISQFRDGRVTLLVATSVAEEG 480

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN  H  FLRNA+NSEETL
Sbjct: 481  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNQQHKVFLRNAKNSEETL 540

Query: 854  RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
            RKEAIERTDL   ++ + L S+D     +YQV +TGAVVS+NSAVGLIHFYCSQLPSDRY
Sbjct: 541  RKEAIERTDLGERRENAILASMDLGDREIYQVPATGAVVSMNSAVGLIHFYCSQLPSDRY 600

Query: 914  SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
            SILRPEFIM + E  GG   YSCKLQLPCNAP E ++GP C+S+R AQQ+VCL ACK+LH
Sbjct: 601  SILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKRLH 660

Query: 974  EMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRD- 1032
            EMGAFTDMLLPDKGSGE+  KV+ ++EGEPLPGT+RHRE+YPEG+ADIL+G+WIL+ +D 
Sbjct: 661  EMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADKDP 720

Query: 1033 -GCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVL---------------------- 1069
                GS +  +++Y VKC N G SKD  LT+ SDF +L                      
Sbjct: 721  DAKPGSNVL-VYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDEVLDMTMDLFVARTM 779

Query: 1070 -------FSSELDA---ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDK 1119
                   F   LD    EL  LK+FHVRLMSIVLDV+V+P TTPWDPAKAYLF PV    
Sbjct: 780  ITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVDPATTPWDPAKAYLFAPVAHKV 839

Query: 1120 SVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAF 1179
              DP+  +DW LV K  +TD+W+NPLQRARPDVYLGT+ER LGGDRREYGFGKLR G+AF
Sbjct: 840  DSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRREYGFGKLRCGLAF 899

Query: 1180 GQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQ--IHNADMPTGKLMMADSCANAGDLEG 1237
            GQ++HPTYGIRGA+AQFDVVKA+GL+  ++ ++  +     P GKL++AD       L G
Sbjct: 900  GQRAHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVVQEVPPEGKLLIADGFVEVEGLVG 959

Query: 1238 RIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQP 1297
            RIVTA HSGKRFYV+S+R++MTA+SSFP+K+GYLGPLEY+SYADYYKQKYGVEL+ KKQP
Sbjct: 960  RIVTAVHSGKRFYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVCKKQP 1019

Query: 1298 LIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
            L+RGRGVS+CKNLLSPRFE S     +  + LDKTYYV LPPELC IHPLPGSLVRGAQR
Sbjct: 1020 LLRGRGVSHCKNLLSPRFETSTGGTLDSLDALDKTYYVMLPPELCLIHPLPGSLVRGAQR 1079

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            LPS+MRRVESMLLAIQLK +I+YP+ ASK+LEALTAASCQETF YERAELLGDAYLKWVV
Sbjct: 1080 LPSVMRRVESMLLAIQLKHQIDYPIAASKVLEALTAASCQETFSYERAELLGDAYLKWVV 1139

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR LFLKYP KHEGQLTRMRQQ+VSN VLYQYAL KGLQSYIQADRFAPSRWAAPGV PV
Sbjct: 1140 SRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQADRFAPSRWAAPGVPPV 1199

Query: 1478 FDEDTKDGDSS--------------LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            FDED KDGD S              +  +E  +   +L T       E   MEDGE+EGD
Sbjct: 1200 FDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELST-------ESASMEDGEIEGD 1252

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
            SS+YRVLSSKTLADVVEA IG+YYVEGG+DAA HLM WIGI VE D  E         VP
Sbjct: 1253 SSAYRVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDDAEAELAIGGCEVP 1312

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E+V+ S+DF +LE ++  KF+ R LLVEAITHASRPSSGV CYQRLEFVGDAVLD+LIT+
Sbjct: 1313 ETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVPCYQRLEFVGDAVLDYLITR 1372

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF YT+LPPGRLTDLRAAAVNNENFARVAVKH  H+HLRHGSSAL+ QIR+FV ++  
Sbjct: 1373 FLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSALETQIRNFVNDIQT 1432

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
            EL KPG NSFGLGD KAPKVLGDI+ESIAGA+FLD+  +T  VW+VF+PLL PMVTPETL
Sbjct: 1433 ELDKPGVNSFGLGDFKAPKVLGDILESIAGALFLDACLETDHVWKVFEPLLQPMVTPETL 1492

Query: 1764 PMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            PMHPVRELQERCQQQAE LEYKASR+GN+ATVEVY+DGVQ+G AQN QKKMAQKLAARNA
Sbjct: 1493 PMHPVRELQERCQQQAEALEYKASRAGNVATVEVYVDGVQIGSAQNAQKKMAQKLAARNA 1552

Query: 1824 LAVLKEKETAEAKEKGD----ENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGG 1879
            L +LKEKE  + K + +     NGK  KNG   FTRQTLND+CL+R WPMP YRCV EGG
Sbjct: 1553 LVILKEKEVTKEKSEAENSEANNGKSSKNGHTNFTRQTLNDLCLKRQWPMPQYRCVLEGG 1612

Query: 1880 PAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDS 1917
            PAHAK+FT++VRV TT  GWT+ECVG+PMPSVKKAKDS
Sbjct: 1613 PAHAKKFTFSVRVLTTTDGWTEECVGDPMPSVKKAKDS 1650


>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
          Length = 1662

 Score = 2410 bits (6245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1189/1658 (71%), Positives = 1353/1658 (81%), Gaps = 67/1658 (4%)

Query: 318  KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGY 377
            KNTIA+LETGAGKTLIAVLL++     L+ Q ++MLAVFLVPKVPLVYQQAEVIR  T +
Sbjct: 2    KNTIAYLETGAGKTLIAVLLMKHKYQVLREQGRRMLAVFLVPKVPLVYQQAEVIRNGTNF 61

Query: 378  VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHH 437
            VVGHYCGEMGQDFWDA+RWQREFDT+ + VMTAQILLNILRHSI++MEAI+LLILDECHH
Sbjct: 62   VVGHYCGEMGQDFWDARRWQREFDTRDIFVMTAQILLNILRHSIVRMEAIHLLILDECHH 121

Query: 438  AVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV 497
            AVKKHPYSLVM EFYH T K+KRP VFGMTASPVNLKGVS+Q DCAIKI NLESKLDS+V
Sbjct: 122  AVKKHPYSLVMPEFYHVTPKDKRPCVFGMTASPVNLKGVSNQEDCAIKIRNLESKLDSIV 181

Query: 498  CTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMG 557
            CTIKDRKELEKHVPMPSE++V YDK A L+SL E++K ME  VEEAA +S RRSKW+FMG
Sbjct: 182  CTIKDRKELEKHVPMPSEIMVLYDKPALLFSLREEIKLMESTVEEAANASVRRSKWKFMG 241

Query: 558  ARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQN 617
            ARDAGAKEELR VYGV+ERTESDGAA+L QKLRAI YAL ELGQWCAYKV+ ++LT+L+N
Sbjct: 242  ARDAGAKEELRLVYGVAERTESDGAASLSQKLRAIIYALDELGQWCAYKVSLTYLTSLRN 301

Query: 618  DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNE----IE 673
            DER ++QLDVKFQE YL KV +LL+C L EGAV+ K A     E+  VEG   +    +E
Sbjct: 302  DERISHQLDVKFQEMYLKKVCALLRCNLHEGAVASK-APAEIGESVAVEGDKAQDPMDVE 360

Query: 674  EGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVA 733
            EGEL DS  VS GEHVD I+GAAVADGKVTPKVQSLIKILL+YQHT+DFRAIIFVERVVA
Sbjct: 361  EGELPDSQAVSVGEHVDEILGAAVADGKVTPKVQSLIKILLRYQHTDDFRAIIFVERVVA 420

Query: 734  ALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEG 793
            A VLPKVFAELPSL FVK ASLIGHNN+Q+MRT QMQETI++FRDGRVTLLVATSVAEEG
Sbjct: 421  AQVLPKVFAELPSLKFVKCASLIGHNNNQDMRTRQMQETISQFRDGRVTLLVATSVAEEG 480

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGN  H  FLRNA+NSEETL
Sbjct: 481  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNQQHKVFLRNAKNSEETL 540

Query: 854  RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
            RKEAIERTDL   ++ + L S+D     +YQV +TGAVVS+NSAVGLIHFYCSQLPSDRY
Sbjct: 541  RKEAIERTDLGERRENAILASMDLGDREIYQVPATGAVVSMNSAVGLIHFYCSQLPSDRY 600

Query: 914  SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
            SILRPEFIM + E  GG   YSCKLQLPCNAP E ++GP C+S+R AQQ+VCL ACK+LH
Sbjct: 601  SILRPEFIMNKIESQGGAVRYSCKLQLPCNAPLENVDGPECNSLRGAQQSVCLEACKRLH 660

Query: 974  EMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRD- 1032
            EMGAFTDMLLPDKGSGE+  KV+ ++EGEPLPGT+RHRE+YPEG+ADIL+G+WIL+ +D 
Sbjct: 661  EMGAFTDMLLPDKGSGEEAAKVEGSEEGEPLPGTSRHREYYPEGIADILKGDWILADKDP 720

Query: 1033 -GCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVL---------------------- 1069
                GS +  +++Y VKC N G SKD  LT+ SDF +L                      
Sbjct: 721  DAKPGSNVL-VYVYMVKCENVGFSKDNLLTETSDFVILVGQKLQDQVLDMTMDLFVARTM 779

Query: 1070 -------FSSELDA---ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDK 1119
                   F   LD    EL  LK+FHVRLMSIVLDV+V+P TTPWDPAKAYLF PV    
Sbjct: 780  ITRASLEFCGNLDLSLHELTDLKSFHVRLMSIVLDVNVDPATTPWDPAKAYLFAPVAHKV 839

Query: 1120 SVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAF 1179
              DP+  +DW LV K  +TD+W+NPLQRARPDVYLGT+ER LGGDRREYGFGKLR G+AF
Sbjct: 840  DSDPLEMVDWGLVRKTIETDSWSNPLQRARPDVYLGTDERALGGDRREYGFGKLRCGLAF 899

Query: 1180 GQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQ--IHNADMPTGKLMMADSCANAGDLEG 1237
            GQ++HPTYGIRGA+AQFDVVKA+GL+  ++ ++  +     P GKL++AD       L G
Sbjct: 900  GQRAHPTYGIRGAVAQFDVVKATGLLSSQDIVEKTVVQEVPPEGKLLIADGFVEVEGLVG 959

Query: 1238 RIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQP 1297
            RIVTA HSGKRFY++S+R++MTA+SSFP+K+GYLGPLEY+SYADYYKQKYGVEL+ KKQP
Sbjct: 960  RIVTAVHSGKRFYMDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYKQKYGVELVCKKQP 1019

Query: 1298 LIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
            L+RGRGVS+CKNLLSPRFE S     +  + LDKTYYV LPPELC IHPLPGSLVRGAQR
Sbjct: 1020 LLRGRGVSHCKNLLSPRFETSTGGTLDSLDALDKTYYVMLPPELCLIHPLPGSLVRGAQR 1079

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            LPS+MRRVESMLLAIQLK +I+YP+ ASK+LEALTAASCQETF YERAELLGDAYLKWVV
Sbjct: 1080 LPSVMRRVESMLLAIQLKHQIDYPIAASKVLEALTAASCQETFSYERAELLGDAYLKWVV 1139

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR LFLKYP KHEGQLTRMRQQ+VSN VLYQYAL KGLQSYIQADRFAPSRWAAPGV PV
Sbjct: 1140 SRRLFLKYPCKHEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQADRFAPSRWAAPGVPPV 1199

Query: 1478 FDEDTKDGDSS--------------LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            FDED KDGD S              +  +E  +   +L T       E   MEDGE+EGD
Sbjct: 1200 FDEDIKDGDDSDKSLKAEASREVVEIVSEEGEIVVKELST-------ESASMEDGEIEGD 1252

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
            SS+YRVLSSKTLADVVEA IG+YYVEGG+DAA HLM WIGI VE D  E         VP
Sbjct: 1253 SSAYRVLSSKTLADVVEAFIGIYYVEGGQDAATHLMNWIGIPVEFDDAEAELAIGGCEVP 1312

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E+V+ S+DF +LE ++  KF+ R LLVEAITHASRPSSGV  YQRLEFVGDAVLD+LIT+
Sbjct: 1313 ETVMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVPGYQRLEFVGDAVLDYLITR 1372

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF YT+LPPGRLTDLRAAAVNNENFARVAVKH  H+HLRHGSSAL+ QIR+FV ++  
Sbjct: 1373 FLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGSSALETQIRNFVNDIQT 1432

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
            EL KPG NSFGLGD KAPKVLGDI+ESIAGA+FLD+  +T  VW+VF+PLL PMVTPETL
Sbjct: 1433 ELDKPGVNSFGLGDFKAPKVLGDILESIAGALFLDACLETDHVWKVFEPLLQPMVTPETL 1492

Query: 1764 PMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            PMHPVRELQERCQQQAE LEYKASR+GN+ATVEVY+DGVQ+G AQN QKKMAQKLAARNA
Sbjct: 1493 PMHPVRELQERCQQQAEALEYKASRAGNVATVEVYVDGVQIGSAQNAQKKMAQKLAARNA 1552

Query: 1824 LAVLKEKETAEAKEKGD----ENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGG 1879
            L +LKEKE  + K + +     NGK  KNG   FTRQTLND+CL+R WPMP YRCV EGG
Sbjct: 1553 LVILKEKEVTKEKSEAENSEANNGKSSKNGHTNFTRQTLNDLCLKRQWPMPQYRCVLEGG 1612

Query: 1880 PAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDS 1917
            PAHAK+FT++VRV TT  GWT+ECVG+PMPSVKKAKDS
Sbjct: 1613 PAHAKKFTFSVRVLTTTDGWTEECVGDPMPSVKKAKDS 1650


>gi|296089027|emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score = 2372 bits (6146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1182/1515 (78%), Positives = 1284/1515 (84%), Gaps = 92/1515 (6%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDILID-EFVNFDTSVVQDSVDNTSNQDSLSNDF 59
            MEGE     ++  G S   +YWLDACEDI  D +F  F++++V +S D  SN D +  DF
Sbjct: 1    MEGE-----MMNKGVSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGV-GDF 54

Query: 60   FGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVDRKR 119
            FGGID ILDSIKNG+GL            E +TG                          
Sbjct: 55   FGGIDRILDSIKNGTGLTPVV-------DEGTTG-------------------------- 81

Query: 120  KLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRARV 179
             + +C     +       G         NGV +   N  ++ASR RDFD ++R+SKRAR+
Sbjct: 82   -IPDCAVSQTWFQTENVAG---------NGVKKHE-NRPNDASRDRDFDDQERYSKRARL 130

Query: 180  SVCKNESQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSSRKDVRDK 239
               KN+  YS+RGQY    ++R   RKR R+ ++  RRD D +RR+EHY   SR++ RD+
Sbjct: 131  GDSKNDRHYSTRGQY--QPRERSSCRKRSRNWEEFDRRDGDQIRRKEHYG--SRRESRDR 186

Query: 240  DFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKK--SEAKE 297
            ++RDRE +GYWERDRLGS  M+F LGSWEA+ NR GK     NQECNG V ++   E KE
Sbjct: 187  EWRDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAEKNQECNGSVTERRLEEPKE 246

Query: 298  KMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
            K+PEEQAR YQLDVLEQAKK+NTIAFLETGAGKTLIAVLLIRS+ NDLQ QNKK+LAVFL
Sbjct: 247  KLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFL 306

Query: 358  VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            VPKVPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA+RWQREF+TK VLVMTAQILLNIL
Sbjct: 307  VPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFETKHVLVMTAQILLNIL 366

Query: 418  RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
            RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKRPSVFGMTASPVNLKGVS
Sbjct: 367  RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVS 426

Query: 478  SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
            SQVDCAIKI NLESKLDS+VCTIKDRKELEKHVPMPSE+VVEYDKAA+LWSLHEQ+KQME
Sbjct: 427  SQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVEYDKAATLWSLHEQIKQME 486

Query: 538  VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
            +AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG
Sbjct: 487  LAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 546

Query: 598  ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
            ELGQWCA+KVAQSFLTALQNDERANYQLDVKFQESYL+KVVSLLQC+L EGAVS KD KV
Sbjct: 547  ELGQWCAFKVAQSFLTALQNDERANYQLDVKFQESYLNKVVSLLQCQLSEGAVSDKDKKV 606

Query: 658  VDSENGFVEGGT--NEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            VD+E      G+   EIEEGEL +SHVVSGGEHVDVIIGAAVADGKVTPKVQSL+KILLK
Sbjct: 607  VDTETSVSVDGSAIEEIEEGELPNSHVVSGGEHVDVIIGAAVADGKVTPKVQSLVKILLK 666

Query: 716  YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAK 775
            YQ TEDFRAIIFVERVVAALVLPKVFAELPSLSF+K ASLIGHNNSQEMRT QMQ+TIAK
Sbjct: 667  YQQTEDFRAIIFVERVVAALVLPKVFAELPSLSFIKCASLIGHNNSQEMRTCQMQDTIAK 726

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERG
Sbjct: 727  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERG 786

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLN 895
            NLSH  FLRNARNSEETLRKEAIERTDLSHLK TSRLISVD  PGTVYQVESTGA+VSLN
Sbjct: 787  NLSHGAFLRNARNSEETLRKEAIERTDLSHLKGTSRLISVDTTPGTVYQVESTGAIVSLN 846

Query: 896  SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS 955
            SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS
Sbjct: 847  SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS 906

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYP 1015
            SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE+ EKVDQNDEG+PLPGTARHREFYP
Sbjct: 907  SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEGEKVDQNDEGDPLPGTARHREFYP 966

Query: 1016 EGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELD 1075
            EGVA++LQGEWIL G+DGC  S+L HL+MY VKCVN G SKDPFLTQVSDF VLF +ELD
Sbjct: 967  EGVANVLQGEWILLGKDGCNSSRLVHLYMYAVKCVNFGSSKDPFLTQVSDFVVLFGNELD 1026

Query: 1076 AE--------------------------------LASLKNFHVRLMSIVLDVDVEPYTTP 1103
            AE                                LASLK+FHVRLMSIVLDVDVEP TTP
Sbjct: 1027 AEVLSISMDLFIARTMVTKASLVFWGPIDITESQLASLKSFHVRLMSIVLDVDVEPSTTP 1086

Query: 1104 WDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGG 1163
            WDPAKAYLFVPVV DKS DP+ ++DWD+VE+I +TD W+NPLQRARPDVYLGTNERTLGG
Sbjct: 1087 WDPAKAYLFVPVVGDKSEDPIRQIDWDIVERIIRTDGWSNPLQRARPDVYLGTNERTLGG 1146

Query: 1164 DRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNA-DMPTGK 1222
            DRREYGFGKLRHGMAFGQKSHPTYGIRGA+AQ+DVV+ASGLVP+RE +++    D+  GK
Sbjct: 1147 DRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQYDVVRASGLVPNRETIEMMKGEDLTKGK 1206

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            LMMA +  +A DL GRIVTAAHSGKRFYV+S+RY+MTAE+SFPRKEGYLGPLEYSSYADY
Sbjct: 1207 LMMAGTQTSAEDLVGRIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYADY 1266

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
            Y+QKYGVELI+K+QPLIRGRGVSYCKNLLSPRFEHSE  EGE +E LDKTYYVFLPPELC
Sbjct: 1267 YRQKYGVELIYKQQPLIRGRGVSYCKNLLSPRFEHSEAHEGESDETLDKTYYVFLPPELC 1326

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCY 1402
            F+HPLPGSLVR AQRLPSIMRRVESMLLA+QLKD INYPVPA+KILEALTAASCQETFCY
Sbjct: 1327 FVHPLPGSLVRSAQRLPSIMRRVESMLLAVQLKDVINYPVPAAKILEALTAASCQETFCY 1386

Query: 1403 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD 1462
            ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ AL KGLQSYIQAD
Sbjct: 1387 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQAD 1446

Query: 1463 RFAPSRWAAPGVLPV 1477
            RFAPSRWAAPGVLP 
Sbjct: 1447 RFAPSRWAAPGVLPT 1461



 Score = 43.9 bits (102), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 1609 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            ++EA+T AS       CY+R E +GDA L  ++++ LF  Y     G+LT +R   V+N 
Sbjct: 1371 ILEALTAAS--CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNM 1428

Query: 1669 NFARVAVKHKLHVHLR 1684
               + A+   L  +++
Sbjct: 1429 VLYQSALCKGLQSYIQ 1444


>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
          Length = 1695

 Score = 2261 bits (5860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1126/1679 (67%), Positives = 1323/1679 (78%), Gaps = 61/1679 (3%)

Query: 301  EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
            EE+AR YQL+VL QAK K T+AFL+TGAGKTLIA+LL++     L+  +K+MLA+FLVPK
Sbjct: 20   EEKARTYQLEVLAQAKVKITVAFLDTGAGKTLIAILLMKHKHQVLREYDKRMLALFLVPK 79

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
            VPLVYQQA+VIR  T + VGHYCGEMG  FWDA+ WQREFDTK V VMTAQILLNILRHS
Sbjct: 80   VPLVYQQADVIRNGTKFSVGHYCGEMGSRFWDARGWQREFDTKDVFVMTAQILLNILRHS 139

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+KMEAI+LLILDECHHAVKKHPYSLVMSEFY  T K+KRP VFGM ASPVNLKGVS+Q 
Sbjct: 140  IVKMEAIHLLILDECHHAVKKHPYSLVMSEFYLMTPKDKRPCVFGMIASPVNLKGVSNQE 199

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            DCAI+I NLESKLDS+VCTI+DRKELEKHVP+PSE ++ YDK A L+SL ++ KQME  V
Sbjct: 200  DCAIEIRNLESKLDSIVCTIRDRKELEKHVPLPSETMILYDKPALLFSLRKERKQMEATV 259

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            E+AA +S RRSKW+ MGARDAGAKEEL+ VY V+ERTESDGAA+L QKLRAI YAL ELG
Sbjct: 260  EKAANASVRRSKWKCMGARDAGAKEELQLVYSVAERTESDGAASLSQKLRAITYALDELG 319

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            QWCAYKV+  +LT+L NDER N+QLDVKFQ+ YL KV +LL+C L EGA   +    +  
Sbjct: 320  QWCAYKVSLGYLTSLHNDERVNHQLDVKFQKLYLKKVCTLLRCSLREGAAGWEVPAEIGE 379

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
              G       ++EEG  L   +VS GEH+D I+GAAVADGKVTPKVQSLIK+L+ YQHT+
Sbjct: 380  SEGDKAQDPMDVEEGSFLT--LVSVGEHLDEILGAAVADGKVTPKVQSLIKVLIGYQHTD 437

Query: 721  DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGR 780
            DFRAIIFVERV   + L +     PSL FVK ASLIGHNN+Q+M T QMQETI+KFRDGR
Sbjct: 438  DFRAIIFVERVWVGVTLCRSLQSCPSLKFVKCASLIGHNNNQDMPTRQMQETISKFRDGR 497

Query: 781  VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
            VTLLVATSVA EGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGNL H 
Sbjct: 498  VTLLVATSVAAEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLQHE 557

Query: 841  TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
             F RNA+NSEETLRKEAIERTDL   ++ + L S+D   G +YQV +TGAVVS+NSAVGL
Sbjct: 558  AFFRNAKNSEETLRKEAIERTDLGEKRENAILASIDIGEGEIYQVPATGAVVSMNSAVGL 617

Query: 901  IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLA 960
            IHFYCSQLPSDRYS+LRPEFIM + E   G   YSC+LQLPC+APFE +EGP C+SMR A
Sbjct: 618  IHFYCSQLPSDRYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCHAPFEAVEGPECNSMRGA 677

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
            QQ+  L   +K+HEMGAFTDMLL +KGS E+  K++ ++EGE LPGT+RHRE+YPEG+AD
Sbjct: 678  QQSCVLEGLQKMHEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIAD 737

Query: 1021 ILQGEWILSGRDGCT--GSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSEL---- 1074
            IL+G+ I++ +D  T  GSK+  +FMYTVKC N G S+D  LT+ SDF +L   +L    
Sbjct: 738  ILKGDRIVAEKDSDTKEGSKVL-VFMYTVKCENVGFSRDSLLTETSDFTLLVGQQLHDQV 796

Query: 1075 ----------------------------DAELASLKNFHVRLMSIVLDVDVEPYTTPWDP 1106
                                        +++L  LK+FHVRLMSIVLDV+VEP TT WDP
Sbjct: 797  LTMTINLFVANPTLLITMSWKKRDLDCSNSQLTELKSFHVRLMSIVLDVNVEPATTRWDP 856

Query: 1107 AKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRR 1166
            AKAYLF PV+   + DP + +DW ++ +  +TD+W+NPLQRA PDV LGT+ER LGGDRR
Sbjct: 857  AKAYLFAPVLHKDASDPKDLVDWVVMRRTIETDSWSNPLQRASPDVNLGTDERALGGDRR 916

Query: 1167 EYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADM--PTGKLM 1224
            EYGFGKLR  +AFGQ +HPTYG RGA AQFDVVKA+GL+P  + ++        P GKL+
Sbjct: 917  EYGFGKLRCSLAFGQGAHPTYGARGAKAQFDVVKATGLLPTSDMVEETTVQEVPPEGKLL 976

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK 1284
            + D       L GRIVTA HSGKR YV+S+R++MTA+SSFP+K+GYLGPLEY+SYADYYK
Sbjct: 977  IVDGFVEVEVLVGRIVTAVHSGKRLYVDSVRFDMTADSSFPQKDGYLGPLEYTSYADYYK 1036

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI 1344
            QKYGVEL+ KKQPL+RGRGVS+CKNLLSPRFE S    G+  + LDKTYYV LPPELC I
Sbjct: 1037 QKYGVELVCKKQPLLRGRGVSHCKNLLSPRFETS----GDSLDALDKTYYVMLPPELCLI 1092

Query: 1345 HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYER 1404
            HPLPGSLVRGAQRLPS+MRRVESMLLAIQLK +I+YP+ ASK+  ALTAAS QETF YER
Sbjct: 1093 HPLPGSLVRGAQRLPSVMRRVESMLLAIQLKHQIDYPIAASKV--ALTAASGQETFSYER 1150

Query: 1405 AELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRF 1464
            AELL DAYL+WVVS  LFLK+P KHEGQLTRMRQ++VSN VLYQ+AL KGLQSYIQADRF
Sbjct: 1151 AELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQADRF 1210

Query: 1465 APSRWAAPGVLPVFDEDTKDGDSSLFDQEKS---------VAEDKLGTDKNYNEYEDDDM 1515
            APSRWAAPGV P FDED +DGD S  D+E           +  ++    K  N  E ++M
Sbjct: 1211 APSRWAAPGVPPAFDEDLRDGDDS--DKESKPEVEREVVEIVGEEGEIVKELNT-ESENM 1267

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGC 1575
            EDGE+EGDS SYRVLSSKTLADVVE  +G+YYVEGG +AA H M W+GI VE D  E   
Sbjct: 1268 EDGEIEGDSGSYRVLSSKTLADVVEVFMGMYYVEGGGEAATHFMNWVGIPVEFDDVETDL 1327

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDA 1635
             +    VPE+V+RS+DF +L+  +  +F++R LLVEAITHASRPS GV CYQRLEFVGDA
Sbjct: 1328 ATGGCQVPETVMRSIDFSSLQKNVGHEFRERSLLVEAITHASRPSLGVPCYQRLEFVGDA 1387

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLDHLIT++LFF YTNLPPGRLTDLRAAAVNNENFARVAVKH  H+HLRHGS+AL+ QIR
Sbjct: 1388 VLDHLITRYLFFKYTNLPPGRLTDLRAAAVNNENFARVAVKHSYHLHLRHGSTALETQIR 1447

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +FV ++  EL KPG NSFGLGD KAPKVLGDI ESIAGA+FLD+  DT  VW+VF+PLL 
Sbjct: 1448 NFVNDIHSELDKPGVNSFGLGDFKAPKVLGDIFESIAGALFLDARLDTHQVWKVFEPLLQ 1507

Query: 1756 PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMA 1815
            PMV+PETLP+HPVR LQERCQQ+AEGLEYK SR+ ++ATVEVY+DGVQ+G  Q+ QKKMA
Sbjct: 1508 PMVSPETLPIHPVRGLQERCQQEAEGLEYKVSRAESVATVEVYVDGVQIGSTQSAQKKMA 1567

Query: 1816 QKLAARNALAVLKEKETAEAK---EKGDEN-GKKRKNGTQTFTRQTLNDICLRRNWPMPL 1871
            QKL ARNAL  LK+KE  + K   E GD N GK  KNG   FTR+T+ND+CL+R WPMP 
Sbjct: 1568 QKLGARNALVKLKDKEVIKVKAEAENGDLNAGKSSKNGHTNFTRKTINDLCLKRQWPMPQ 1627

Query: 1872 YRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWY 1930
            Y+CV E GPAHAK+FT +VRV TT  GWT+ECVGEPM SVKKAKDSAA++LL  L + Y
Sbjct: 1628 YKCVLESGPAHAKKFTLSVRVLTTTDGWTEECVGEPMASVKKAKDSAALVLLATLRRSY 1686


>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
 gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
          Length = 1728

 Score = 2240 bits (5804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1121/1724 (65%), Positives = 1345/1724 (78%), Gaps = 83/1724 (4%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQ 303
            RE R Y E+D  G N + F +    A    AG       Q  NG  GK    KEK+  EQ
Sbjct: 41   REKRAYLEKDADGRNVLKFGI-RVPAARGGAGPVTEPSTQ--NGSAGKA--GKEKVCVEQ 95

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+VL QA++ NTIAFLETGAGKTLIAVLL++     LQR   K+L VFLVPKVPL
Sbjct: 96   ARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQR---KILTVFLVPKVPL 152

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            VYQQAEVIRE+T + VGHYCGEM QDFWD++RWQREF +K+VLVMTAQILLNILRHSI++
Sbjct: 153  VYQQAEVIRERTNFNVGHYCGEMVQDFWDSKRWQREFQSKEVLVMTAQILLNILRHSIVR 212

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
            ME I+LLILDECHHAVKKHPYSLVMSEFYH   KEKRP +FGMTASPVNLKGVS+Q DCA
Sbjct: 213  MEDIDLLILDECHHAVKKHPYSLVMSEFYHLAPKEKRPKIFGMTASPVNLKGVSNQEDCA 272

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
            +KI NLE+KLDSVVCTI+DRKELEKHVPMPSE VVEYDKAA LWSL E++KQM+  VEEA
Sbjct: 273  VKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEYDKAAVLWSLREKIKQMKEQVEEA 332

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
              +SS+R+KWQFMGARDAGA +EL  VYGV+ER ESDGAANL+QKLR+I + L ELGQWC
Sbjct: 333  CSASSKRTKWQFMGARDAGASDELHFVYGVAERKESDGAANLLQKLRSIIFCLDELGQWC 392

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
            AYKVA S L  L++DER     DVK+QE YL+K+V +L+C+L +GA S    + V     
Sbjct: 393  AYKVASSSLGNLRHDERTA---DVKYQELYLTKIVDMLKCDLQQGAASSSKLEAVH---- 445

Query: 664  FVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFR 723
                   ++EEGE++D++ +SGGEH D ++GAAVAD KVTPKVQSLI+IL KY+H EDFR
Sbjct: 446  ------GDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSLIQILRKYEHVEDFR 499

Query: 724  AIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTL 783
            AIIFV+RVVAAL LP V +ELPSL +V+S SL+GHNNSQ++ T  M ++++KFRDG + +
Sbjct: 500  AIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNSQDVSTRHMHDSLSKFRDGSLNV 559

Query: 784  LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
            LVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSDYILM+E+GN  H +FL
Sbjct: 560  LVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDYILMLEKGNKVHQSFL 619

Query: 844  RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
            RNARNSEETLRKEA ERT L    + + + S++   G  YQV STGA+V+LNSAVGLIHF
Sbjct: 620  RNARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPSTGAMVTLNSAVGLIHF 679

Query: 904  YCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQA 963
            YCSQLPSDRYSIL+PEF++ +H   G    +SCKL+LP NAP E  +GPVCS+M+ AQQA
Sbjct: 680  YCSQLPSDRYSILKPEFVLTKHST-GDVVYFSCKLRLPSNAPVESFDGPVCSTMKGAQQA 738

Query: 964  VCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            VCL ACKKLHEM AFTDMLLPD G+ ++ +K + N+  +P+PGTAR+RE++PEG+AD L+
Sbjct: 739  VCLEACKKLHEMAAFTDMLLPDTGTPDKSDKGEDNETTDPIPGTARYREYFPEGIADFLK 798

Query: 1024 GEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELD-------- 1075
            G+WIL+     + S    L+MY ++  N G S DP +TQ SDFAVLF  E+D        
Sbjct: 799  GDWILNTNYLLSTS----LYMYIIQYSNVGFSTDPLVTQTSDFAVLFGREMDPEVLTASV 854

Query: 1076 ------------------------AELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYL 1111
                                    +EL  LK FHVRLMSIVLDVDVEP +TPWD  KAYL
Sbjct: 855  DLFVARTLTTQASLVFSGVHHITSSELTLLKAFHVRLMSIVLDVDVEPASTPWDSNKAYL 914

Query: 1112 FVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFG 1171
            FVP+ S  +     ++DW L+ K+  + AW++PLQRARPDV+LGTNER LGGDRREYGF 
Sbjct: 915  FVPLTSSCT----KQIDWALMNKVLGSHAWSSPLQRARPDVFLGTNERALGGDRREYGFS 970

Query: 1172 KLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGK-LMMADSCA 1230
            KLR     G + HPTYGIRGA+A+FDV+KASG+ P RE ++      P G+ L++AD  A
Sbjct: 971  KLRSN---GVQKHPTYGIRGAVAEFDVIKASGIAPLREKLE------PEGRQLLLADGYA 1021

Query: 1231 NAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVE 1290
            N  +++G++VTAAHSGKRFYVES+  EMTAES FPRKEGYLG +EYSSYADYY+QKYGV 
Sbjct: 1022 NMDEMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVR 1081

Query: 1291 LIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGS 1350
            L  + QP++R RGVS+CKNLLSPRF+  E      EE+ DKTYYV LPPE+C +HPLPG 
Sbjct: 1082 LHCRHQPMLRCRGVSHCKNLLSPRFKLLE----SSEELSDKTYYVMLPPEICLVHPLPGC 1137

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGD 1410
            LVRGAQRLPS+M+RVES+LLA+QLK +I +P+PA+K+LEALTAASCQETF YERAELLGD
Sbjct: 1138 LVRGAQRLPSVMKRVESILLAVQLKHEIGFPIPAAKVLEALTAASCQETFSYERAELLGD 1197

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWA 1470
            AYLKWVVSR LF+K+P+KHEGQLTRMRQQ VSN+VLY++A+SK LQSYIQ+DRFAPSRWA
Sbjct: 1198 AYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRWA 1257

Query: 1471 APGVLPVFDEDTKDG--DSSLFDQEKSVAEDKLGTDKNYNEYEDDD---MEDGELEGDSS 1525
            APGV PVFDED KD   D+   +  K+   ++  T  +  E   DD   +EDGE E DSS
Sbjct: 1258 APGVPPVFDEDLKDANLDNEAAEVPKANEHEERSTKSSGEEEVLDDSTSLEDGEAEWDSS 1317

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
            SYRVLSSKTLADVVEALIGVYYVEGG  AA H M WI I ++ D  E         VP+S
Sbjct: 1318 SYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWINIPIDYDEAEANAARAGCSVPDS 1377

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            V+ S+DF  LE A+  KF+ + +LVEAI+HASRPS+GV CYQRLEFVGDAVLDHLIT++L
Sbjct: 1378 VMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVPCYQRLEFVGDAVLDHLITRYL 1437

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF Y +LPPGRLTDLRAAAVNNENFAR++VKH  H+HLRHGSSAL+ QI+DFVK++  EL
Sbjct: 1438 FFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDFVKDIQSEL 1497

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             KPG NSFG+GD KAPKVLGDI+ESIAGAIFLD+G     VW+VF+ LL+PMVTP+TLP+
Sbjct: 1498 DKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFERLLEPMVTPDTLPV 1557

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEY+ASR G++ATVEV++DGVQ+G AQN QKKMAQKLAARNALA
Sbjct: 1558 HPVRELQERCQQQAEGLEYRASREGSIATVEVFVDGVQIGCAQNTQKKMAQKLAARNALA 1617

Query: 1826 VLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKR 1885
             LKE+++ E  E+ ++  K   +    FTRQTLNDICL+R WPMP YR + E GPAHAKR
Sbjct: 1618 ALKERDSLE--EESNKVTKMENDKANAFTRQTLNDICLQRQWPMPQYRLLSESGPAHAKR 1675

Query: 1886 FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKW 1929
            FTY VRVNT ++GWTDEC G+ MPS+KKAKDSAA++LLE+L +W
Sbjct: 1676 FTYTVRVNTRERGWTDECEGQAMPSMKKAKDSAALVLLEVLKQW 1719


>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
 gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
          Length = 1730

 Score = 2237 bits (5797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1118/1724 (64%), Positives = 1343/1724 (77%), Gaps = 83/1724 (4%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQ 303
            RE R Y E+D  G N + F +    A   R G +        NG  GK    KEK+  EQ
Sbjct: 41   REKRAYLEKDADGRNVLKFGIRVPAA---RGGADPVTEPSTQNGSAGKA--GKEKVCVEQ 95

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+VL QA++ NTIAFLETGAGKTLIAVLL++     LQR   K+L VFLVPKVPL
Sbjct: 96   ARAYQLEVLSQAEEGNTIAFLETGAGKTLIAVLLMKRKAELLQR---KILTVFLVPKVPL 152

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            VYQQAEVIRE+T + VGHYCGEM QDFWD++RWQREF +K+VLVMTAQILLNILRHSI++
Sbjct: 153  VYQQAEVIRERTNFNVGHYCGEMVQDFWDSKRWQREFQSKEVLVMTAQILLNILRHSIVR 212

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
            ME I+LLILDECHHAVKKHPYSLVMSEFYH   KEKRP +FGMTASPVNLKGVS+Q DCA
Sbjct: 213  MEDIDLLILDECHHAVKKHPYSLVMSEFYHLAPKEKRPKIFGMTASPVNLKGVSNQEDCA 272

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
            +KI NLE+KLDSVVCTI+DRKELEKHVPMPSE VVEYDKAA LWSL E++KQM+  VEEA
Sbjct: 273  VKIRNLETKLDSVVCTIRDRKELEKHVPMPSETVVEYDKAAVLWSLREKIKQMKEQVEEA 332

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
              +SS+R+KWQFMGARDAGA +EL  VYGV+ER ESDGAANL+QKLR+I + L ELGQWC
Sbjct: 333  CSASSKRTKWQFMGARDAGASDELHFVYGVAERKESDGAANLLQKLRSIIFCLDELGQWC 392

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
            AYKVA S L  L++DER     DVK+QE YL+K+V +L+C+L +GA S    + V     
Sbjct: 393  AYKVASSSLGNLRHDERTA---DVKYQELYLTKIVDMLKCDLQQGAASSSKLEAVH---- 445

Query: 664  FVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFR 723
                   ++EEGE++D++ +SGGEH D ++GAAVAD KVTPKVQSLI+IL KY+H +DFR
Sbjct: 446  ------GDVEEGEVIDTNSLSGGEHFDEVLGAAVADKKVTPKVQSLIQILRKYEHVDDFR 499

Query: 724  AIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTL 783
            AIIFV+RVVAAL LP V +ELPSL +V+S SL+GHNNSQ++ T  M ++++KFRDG + +
Sbjct: 500  AIIFVDRVVAALTLPCVLSELPSLKYVRSGSLVGHNNSQDVSTRHMHDSLSKFRDGSLNV 559

Query: 784  LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
            LVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSDYILM+E+GN  H +FL
Sbjct: 560  LVATSVAEEGLDIRQCNVVVRFDLAKTVLAYIQSRGRARKPGSDYILMLEKGNKVHQSFL 619

Query: 844  RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
            RNARNSEETLRKEA ERT L    + + + S++   G  YQV STGA+V+LNSAVGLIHF
Sbjct: 620  RNARNSEETLRKEATERTKLDPWTEAAIVASLEDGKGETYQVPSTGAMVTLNSAVGLIHF 679

Query: 904  YCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQA 963
            YCSQLPSDRYSIL+PEF++ +H   G    +SCKL+LP NAP E  +GPVCS+M+ AQQA
Sbjct: 680  YCSQLPSDRYSILKPEFVLTKHST-GDVVYFSCKLRLPSNAPVESFDGPVCSTMKGAQQA 738

Query: 964  VCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            VCL ACKKLHEM AFTDMLLPD G+ ++ +K + N+  +P+PGTAR+RE++PEG+AD L+
Sbjct: 739  VCLEACKKLHEMAAFTDMLLPDTGTSDKSDKGEDNETTDPIPGTARYREYFPEGIADFLK 798

Query: 1024 GEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELD-------- 1075
            G+WIL+     + S    L+MY +   N G S DP +TQ SDFAVLF  E+D        
Sbjct: 799  GDWILNTNYLLSTS----LYMYIIHYSNIGFSTDPLVTQTSDFAVLFGREMDPEVLTASV 854

Query: 1076 ------------------------AELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYL 1111
                                    +EL  LK FHVRLMSIVLDVDVEP +TPWD  KAYL
Sbjct: 855  DLFVARTLTTQASLVFSGVHHITSSELTLLKAFHVRLMSIVLDVDVEPASTPWDSNKAYL 914

Query: 1112 FVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFG 1171
            FVP+ S  +     ++DW L+ ++  + AW++PLQRARPDV+LGTNER LGGDRREYGF 
Sbjct: 915  FVPLTSSCT----KQIDWALMNEVLGSHAWSSPLQRARPDVFLGTNERALGGDRREYGFS 970

Query: 1172 KLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGK-LMMADSCA 1230
            KLR     G + HPTYGIRGA+A+FDV+KASG+ P RE ++      P G+ L++AD  A
Sbjct: 971  KLRSN---GVQKHPTYGIRGAVAEFDVIKASGIAPLREKLE------PEGRQLLLADGYA 1021

Query: 1231 NAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVE 1290
            N  +++G++VTAAHSGKRFYVES+  EMTAES FPRKEGYLG +EYSSYADYY+QKYGV 
Sbjct: 1022 NMDEMDGKLVTAAHSGKRFYVESVMREMTAESPFPRKEGYLGSVEYSSYADYYEQKYGVR 1081

Query: 1291 LIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGS 1350
            L  + QP++R RGVS+CKNLLSPRF+  E      EE+ DKTYYV LPPE+C +HPLPG 
Sbjct: 1082 LHCRHQPMLRCRGVSHCKNLLSPRFKLLE----SSEELSDKTYYVMLPPEICLVHPLPGC 1137

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGD 1410
            LVRGAQRLPS+M+RVES+LLA+QLK +I +P+PA+K+LEALTAASCQETF YERAELLGD
Sbjct: 1138 LVRGAQRLPSVMKRVESILLAVQLKHEIGFPIPAAKVLEALTAASCQETFSYERAELLGD 1197

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWA 1470
            AYLKWVVSR LF+K+P+KHEGQLTRMRQQ VSN+VLY++A+SK LQSYIQ+DRFAPSRWA
Sbjct: 1198 AYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSYIQSDRFAPSRWA 1257

Query: 1471 APGVLPVFDEDTKDG--DSSLFDQEKSVAEDKLGTDKNYNEYEDDD---MEDGELEGDSS 1525
            APGV PVFDED KD   D+   +  K+   ++  T  +  E   DD   +EDGE E DSS
Sbjct: 1258 APGVPPVFDEDLKDSNLDNEAAEVPKASEHEERSTKSSGEEEVLDDSTSLEDGEAEWDSS 1317

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
            SYRVLSSKTLADVVEALIGVYYVEGG  AA H M WI I ++ D  E         VP+S
Sbjct: 1318 SYRVLSSKTLADVVEALIGVYYVEGGTKAAAHFMNWISIPIDYDEAEANAARAGCSVPDS 1377

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            V+ S+DF  LE A+  KF+ + +LVEAI+HASRPS+GV CYQRLEFVGDAVLDHLIT++L
Sbjct: 1378 VMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVPCYQRLEFVGDAVLDHLITRYL 1437

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF Y +LPPGRLTDLRAAAVNNENFAR++VKH  H+HLRHGSSAL+ QI+DFVK++  EL
Sbjct: 1438 FFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGSSALEAQIKDFVKDIQSEL 1497

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             KPG NSFG+GD KAPKVLGDI+ESIAGAIFLD+G     VW+VF+ LL+PMVTP+TLP+
Sbjct: 1498 DKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFERLLEPMVTPDTLPV 1557

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEY+ASR G++ATVEV++DGVQ+G AQN QKKMAQKLAARNALA
Sbjct: 1558 HPVRELQERCQQQAEGLEYRASREGSIATVEVFVDGVQIGCAQNTQKKMAQKLAARNALA 1617

Query: 1826 VLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKR 1885
             LKE+++ E  E+ ++  K        FTRQTLNDICL+R WPMP YR + E GPAHAKR
Sbjct: 1618 ALKERDSLE--EESNKVAKMENEKANAFTRQTLNDICLQRQWPMPQYRLLSESGPAHAKR 1675

Query: 1886 FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKW 1929
            FTY VRVNT ++GWTDEC G+ MPS+KKAKDSAA++LLE+L +W
Sbjct: 1676 FTYTVRVNTRERGWTDECEGQAMPSMKKAKDSAALVLLEVLKQW 1719


>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
          Length = 1307

 Score = 2117 bits (5484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1035/1311 (78%), Positives = 1141/1311 (87%), Gaps = 51/1311 (3%)

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
            D ++ +SEN       NE+EEGEL DSH    GEHVD +IGAAVADGKVTP+VQ+LIKIL
Sbjct: 7    DVEMHNSENP----KPNELEEGELPDSH----GEHVDEVIGAAVADGKVTPRVQALIKIL 58

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            LKYQHTEDFRAIIFVERVV ALVLPKVFAELPSL F++ ASLIGHNN+QEMR+ QMQ+TI
Sbjct: 59   LKYQHTEDFRAIIFVERVVTALVLPKVFAELPSLGFIRCASLIGHNNNQEMRSCQMQDTI 118

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+E
Sbjct: 119  TKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLE 178

Query: 834  RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVS 893
            RGN+SH  FLRNARNSEETLRKEAIERTDLSHL  TS L  VD  P ++YQVESTGAVVS
Sbjct: 179  RGNMSHEAFLRNARNSEETLRKEAIERTDLSHLDGTSMLSPVDISPDSMYQVESTGAVVS 238

Query: 894  LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
            LNSAVGL+HFYCSQLPSDRYSILRPEFIM++HEKPGG TEYSCKLQLPCNAPFEKLEGP+
Sbjct: 239  LNSAVGLVHFYCSQLPSDRYSILRPEFIMQKHEKPGGSTEYSCKLQLPCNAPFEKLEGPI 298

Query: 954  CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREF 1013
            CSS+RLAQQAVCLAACKKLHEMGAFTDMLLPD+GSGE  EK +QNDEG+PLPGTARHREF
Sbjct: 299  CSSIRLAQQAVCLAACKKLHEMGAFTDMLLPDRGSGE-GEKTEQNDEGDPLPGTARHREF 357

Query: 1014 YPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSE 1073
            +PEGVA+IL GEWILSGRDG   S+   L++Y+V CVN G SKDPF+TQ+S+FA++F +E
Sbjct: 358  FPEGVAEILHGEWILSGRDGYQSSQFIKLYLYSVNCVNIGTSKDPFVTQLSNFALIFGNE 417

Query: 1074 LDAELAS--------------------------------LKNFHVRLMSIVLDVDVEPYT 1101
            LDAE+ S                                LK+FHVRLMSIVLDVDV+P T
Sbjct: 418  LDAEVLSTTMDLFVARTIITKASLVFRGPIEITESQLILLKSFHVRLMSIVLDVDVDPST 477

Query: 1102 TPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTL 1161
            TPWDPAKAYLFVPV ++K +D + E+DW LV  I  +DAW NPLQRARPDVYLGTNERTL
Sbjct: 478  TPWDPAKAYLFVPVGAEKCMDLLREIDWTLVNSIVNSDAWNNPLQRARPDVYLGTNERTL 537

Query: 1162 GGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTG 1221
            GGDRREYGFGKLRHG AFGQK+HPTYGIRGAIA+FDVVKASGLVP R      N     G
Sbjct: 538  GGDRREYGFGKLRHGTAFGQKAHPTYGIRGAIAEFDVVKASGLVPGRGWGHF-NDYQNKG 596

Query: 1222 KLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYAD 1281
            KL MADSC +A DL G +VTAAHSGKRFYV+SI Y M AE+SFPRKEGYLGPLEYSS+AD
Sbjct: 597  KLFMADSCWDAKDLAGMVVTAAHSGKRFYVDSICYNMNAENSFPRKEGYLGPLEYSSFAD 656

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YYKQKYGVEL++KKQPLIR RGVSYCKNLLSPRFEHSE   GE  E LDKTYYV+LPPEL
Sbjct: 657  YYKQKYGVELVYKKQPLIRARGVSYCKNLLSPRFEHSEASNGEFSENLDKTYYVYLPPEL 716

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFC 1401
            C +HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD I YPVPA+KILEALTAASCQETFC
Sbjct: 717  CLVHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDIIGYPVPANKILEALTAASCQETFC 776

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN++LYQYAL+K LQSYIQA
Sbjct: 777  YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMILYQYALNKNLQSYIQA 836

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN-YNEYEDDDM-EDGE 1519
            DRFAPSRWAAPGVLPVFDE+T+D + S+FD+E + + +     KN Y++Y+ D M EDGE
Sbjct: 837  DRFAPSRWAAPGVLPVFDEETRDSEPSIFDEEFTPSSE---LQKNLYDDYDGDSMQEDGE 893

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
            +EGDSS YRVLSSKTLADVVEALIGVYYV GGK A NHLMKWIGI  E DP+E+   S+P
Sbjct: 894  IEGDSSCYRVLSSKTLADVVEALIGVYYVAGGKIATNHLMKWIGINAELDPQEIPS-SKP 952

Query: 1580 ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1639
              +PES+++S++F  LE AL IKF+++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH
Sbjct: 953  YNIPESIIKSINFDTLEGALGIKFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1012

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            LITKHLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL+ QIR+FVK
Sbjct: 1013 LITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVK 1072

Query: 1700 EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            +V EEL KPGFNSFGLGDCKAPKVLGDI ESIAGAIFLDSG  TSVVW+VFQPLLDPMVT
Sbjct: 1073 DVQEELSKPGFNSFGLGDCKAPKVLGDIFESIAGAIFLDSGCATSVVWKVFQPLLDPMVT 1132

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLA 1819
            P+TLPMHPVRELQERCQQQAEGLEYKASR+GN+ATVEV +DG+Q+GVAQNPQKKMAQKLA
Sbjct: 1133 PDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQKLA 1192

Query: 1820 ARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGG 1879
            ARNAL VLKEKETA AK+  +++G+K KNG+Q FTRQTLNDICLRR WPMP YRC+ EGG
Sbjct: 1193 ARNALVVLKEKETA-AKKDTEKDGEK-KNGSQ-FTRQTLNDICLRRQWPMPQYRCINEGG 1249

Query: 1880 PAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWY 1930
            PAHAKRF YAVRVNT+D GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+ Y
Sbjct: 1250 PAHAKRFVYAVRVNTSDSGWTDECIGEPMPSVKKAKDSAAVLLLELLNRNY 1300


>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
 gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
          Length = 1817

 Score = 1894 bits (4907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 921/1142 (80%), Positives = 993/1142 (86%), Gaps = 53/1142 (4%)

Query: 774  AKFRDGRVTLLVATSVA-----EEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
            A   DG+VT  V + +      +   D R    +I  +     L   +SRGRARKPGSDY
Sbjct: 680  AAVADGKVTPKVQSLIKVLLRYQHTEDFR---AIIFVERVVAALVLPKSRGRARKPGSDY 736

Query: 829  ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
            ILM+ERGNLSH  FLRNARNSEETLRKEAIERTDLSHLKDTSRLI+VD++PGTVYQVEST
Sbjct: 737  ILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKDTSRLIAVDSIPGTVYQVEST 796

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
            GAVVSLNSAVGL+HFYCSQLPSDRYSILRP FIME+HEKPGGPTEYSCKLQLPCNAPFE+
Sbjct: 797  GAVVSLNSAVGLVHFYCSQLPSDRYSILRPGFIMEKHEKPGGPTEYSCKLQLPCNAPFEE 856

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTA 1008
            LEGP          AVCLAACKKLHEMGAFTDMLLPDKGS E+++KVDQNDEGEPLPGTA
Sbjct: 857  LEGP----------AVCLAACKKLHEMGAFTDMLLPDKGSEEEKDKVDQNDEGEPLPGTA 906

Query: 1009 RHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAV 1068
            RHREFYPEGVA  LQGEWIL GRDGC  SK+ HL++Y V+C+N G S DPFLTQVS+FAV
Sbjct: 907  RHREFYPEGVAKTLQGEWILCGRDGCNNSKVLHLYLYGVRCLNIGTSNDPFLTQVSNFAV 966

Query: 1069 LFSSELDAE--------------------------------LASLKNFHVRLMSIVLDVD 1096
            LF +ELDAE                                LASLKNFHVRLMSIVLDVD
Sbjct: 967  LFGNELDAEVLSMSMDLFIARTMITKASLVFRGRIPITESQLASLKNFHVRLMSIVLDVD 1026

Query: 1097 VEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGT 1156
            VEP TTPWDPAKAYLFVP+VSDKSVDP+ E+DWDLVE I  TDAW+N LQRARPDVYLGT
Sbjct: 1027 VEPSTTPWDPAKAYLFVPMVSDKSVDPIKEIDWDLVENIIGTDAWSNRLQRARPDVYLGT 1086

Query: 1157 NERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDR--EAMQIH 1214
            NERTLGGDRREYGFGKLRHG+AFGQK HPTYGIRGA+AQFDVVKASGL+P R  +A +  
Sbjct: 1087 NERTLGGDRREYGFGKLRHGIAFGQKPHPTYGIRGAVAQFDVVKASGLIPKRGWDATETQ 1146

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
              ++  GKLMMAD+C NA  L GRIVTAAHSGKRFYV+SI Y+MTAE SFPRKEGYLGPL
Sbjct: 1147 KLELTKGKLMMADTCVNADALMGRIVTAAHSGKRFYVDSICYDMTAEISFPRKEGYLGPL 1206

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            EYSSYADYYKQKYGVEL FK+QPL+RGRGVSYCKNLLSPRFEHS+  EG+ EE LDKTYY
Sbjct: 1207 EYSSYADYYKQKYGVELKFKQQPLLRGRGVSYCKNLLSPRFEHSDSNEGDAEENLDKTYY 1266

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAA 1394
            VFLPPELC +HPLPGSLVRGAQRLPSIMRRVESMLLA++LKD INYPVPASKILEALTAA
Sbjct: 1267 VFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVELKDIINYPVPASKILEALTAA 1326

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQYAL+KG
Sbjct: 1327 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYALNKG 1386

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQSYIQADRFAPSRWAAPGVLPVFDE+TKDGDS +FDQEKS+AED+ G +   + YE++ 
Sbjct: 1387 LQSYIQADRFAPSRWAAPGVLPVFDEETKDGDSYIFDQEKSLAEDRTGMNHLDDGYENE- 1445

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            +EDGELE D+SSYRVLSSKTLADVVEALIGVYYVEGGK+A NHLMKWIGIQVE D EE+ 
Sbjct: 1446 IEDGELESDASSYRVLSSKTLADVVEALIGVYYVEGGKNAVNHLMKWIGIQVEFDHEEID 1505

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGD 1634
              SRP  VPESVLRSVDF  LE AL IKF DRGLL+EAITHASRPSSGVSCYQRLEFVGD
Sbjct: 1506 GASRPFNVPESVLRSVDFDTLEGALDIKFNDRGLLIEAITHASRPSSGVSCYQRLEFVGD 1565

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            AVLDHLIT+HLFF+YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL++QI
Sbjct: 1566 AVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALEKQI 1625

Query: 1695 RDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            RDFV+EV +ELLKP FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT+VVW+VFQPLL
Sbjct: 1626 RDFVREVQDELLKPVFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTAVVWKVFQPLL 1685

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKM 1814
             PMVTPETLPMHPVRELQERCQQQAEGLEYKA+RSGNLATVEV+IDGVQVGVAQNPQKKM
Sbjct: 1686 HPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFIDGVQVGVAQNPQKKM 1745

Query: 1815 AQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRC 1874
            AQKLAARNAL VLKEKETAEAKEK DENGKK++NG QTFTRQTLNDICLRRNWPMP YR 
Sbjct: 1746 AQKLAARNALVVLKEKETAEAKEKSDENGKKKRNGNQTFTRQTLNDICLRRNWPMPSYRM 1805

Query: 1875 VR 1876
             R
Sbjct: 1806 DR 1807



 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/738 (72%), Positives = 595/738 (80%), Gaps = 50/738 (6%)

Query: 20  SYWLDACEDI---LIDEFVNFDTSVVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNGSGL 76
           SYWLDACEDI   +ID+FV+FDTS+V +   + ++  +      GGIDHILDSIKNGSGL
Sbjct: 19  SYWLDACEDISCDIIDDFVDFDTSIVPELSVDNNSNVNNDFF--GGIDHILDSIKNGSGL 76

Query: 77  P----NSNGNLLKNGSEDSTGG-------ENHQAEGLILLSNNGSDKDGVDRKRKLENCE 125
           P     S    + NG+ D   G       EN    G  +  +NG DKD +DRK ++EN  
Sbjct: 77  PPLHNASTTANVSNGNRDCIVGDGWFINVENGVCHGSSVSQSNGGDKDNIDRKGQVENGG 136

Query: 126 N-VNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRARVSVCKN 184
           N +N  L NGK   R S++F KENG          E S  +  D ++R ++         
Sbjct: 137 NGLN--LSNGKREERFSNNFVKENG-------KKDEQSTEQGIDGDERAAEH-------- 179

Query: 185 ESQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSSRKDVRDKDFRDR 244
                        D++R   RKR RD D+  RRDRD  RRR+ Y+GS+R+D RD+D+R+R
Sbjct: 180 ------------RDRERCSSRKRSRDWDESDRRDRDISRRRDRYSGSNRRDGRDRDWRER 227

Query: 245 EPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSEAKEK-MPEEQ 303
           E RGYWERDR GS  MVFRLG+WEADHN+ G+EAN   QEC G++ KKSE  ++ +PEEQ
Sbjct: 228 ELRGYWERDRSGSKDMVFRLGTWEADHNKEGREANDKIQECKGELEKKSEESKEKVPEEQ 287

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQLDVL+QAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK+LAVFLVPKVPL
Sbjct: 288 ARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKILAVFLVPKVPL 347

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           VYQQAEVIRE+ GY VGHYCGEMGQDFWD +RWQREF+TKQVLVMTAQILLNILRHSIIK
Sbjct: 348 VYQQAEVIRER-GYQVGHYCGEMGQDFWDTRRWQREFETKQVLVMTAQILLNILRHSIIK 406

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
           MEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKRPSVFGMTASPVNLKGVSSQVDCA
Sbjct: 407 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQVDCA 466

Query: 484 IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
           IKI NLESKLDS+VCTIKDRKELEKHVPMP+EVVVEYDKAASLWSLHEQ+KQ+E AVEEA
Sbjct: 467 IKIRNLESKLDSIVCTIKDRKELEKHVPMPAEVVVEYDKAASLWSLHEQIKQIEAAVEEA 526

Query: 544 AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
           AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG+LGQWC
Sbjct: 527 AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGDLGQWC 586

Query: 604 AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
           AYKVAQSFLTALQNDERANYQLDVKFQESYL +VV LLQC+L EGAV+ KD KV D+ N 
Sbjct: 587 AYKVAQSFLTALQNDERANYQLDVKFQESYLERVVLLLQCQLTEGAVTDKDTKVSDNGND 646

Query: 664 FVEGGT--NEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
            ++ G   +EIEEGEL DSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK+LL+YQHTED
Sbjct: 647 NIQDGPGFDEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKVLLRYQHTED 706

Query: 722 FRAIIFVERVVAALVLPK 739
           FRAIIFVERVVAALVLPK
Sbjct: 707 FRAIIFVERVVAALVLPK 724


>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
 gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
          Length = 1965

 Score = 1751 bits (4534), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 870/1113 (78%), Positives = 947/1113 (85%), Gaps = 77/1113 (6%)

Query: 244  REPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEA---NGINQECNGKVGKKSEAKEKMP 300
            R+ +GYWERD+  SN +VFR G+WE + + +  +    N I QE       K +    +P
Sbjct: 165  RDVKGYWERDK-SSNDLVFRSGTWEPNLHTSQHKMDIDNPIKQE-------KPKETVPVP 216

Query: 301  EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
            EE+AR YQLDVLEQAK +NTIAFLETGAGKTLIAVLLI+SI   L  QNKKMLAVFLVPK
Sbjct: 217  EEKARQYQLDVLEQAKTRNTIAFLETGAGKTLIAVLLIKSIHETLHLQNKKMLAVFLVPK 276

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
            VPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA+RWQREFDTK VLVMTAQILLNILRHS
Sbjct: 277  VPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHS 336

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKRPSVFGMTASPVNLKGVSSQV
Sbjct: 337  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASPVNLKGVSSQV 396

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            DCAIKI NLESKLDS+VCTIKDRKELEKHVPMPSE+VV+YDKAASL  LHEQ+KQME  V
Sbjct: 397  DCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPSEIVVKYDKAASLCYLHEQIKQMETEV 456

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEAA+SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA+NYALGELG
Sbjct: 457  EEAAKSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELG 516

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            QWCAYKVAQSFL ALQNDERANYQLDVKFQESYLSKVVSLL+C+L EGA+S K+  V DS
Sbjct: 517  QWCAYKVAQSFLAALQNDERANYQLDVKFQESYLSKVVSLLKCQLSEGAISDKNDGVDDS 576

Query: 661  ENGFVEGGTNEIEEGE---LLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
            +NG    G++E EE E   L DSHVVSGGEHVDVIIGAAVADGKVTPKVQ+LIKILLKYQ
Sbjct: 577  QNGAAHSGSDEHEEIEEGELPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQ 636

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFR 777
            +T+DFRAIIFVERVV+ALVLPKVFAELPSLSFVK ASLIGHNNSQEMRT QM +TIAKFR
Sbjct: 637  NTDDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTHQMHDTIAKFR 696

Query: 778  DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
            DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGNL
Sbjct: 697  DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERGNL 756

Query: 838  SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSA 897
            SH  FL+NARNSEETLR+EAIERTDLSHLKD+SRLISVD  P T+YQV+STGAVVSLNSA
Sbjct: 757  SHEAFLKNARNSEETLRREAIERTDLSHLKDSSRLISVDTHPETMYQVKSTGAVVSLNSA 816

Query: 898  VGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSM 957
            VGL+HFYCSQLPSDRYSILRPEFIME+HE  GGPTEYSC+LQLPCNAPFE LEGP+CSS+
Sbjct: 817  VGLVHFYCSQLPSDRYSILRPEFIMEKHENSGGPTEYSCRLQLPCNAPFENLEGPICSSI 876

Query: 958  RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEG 1017
            RLAQQAVCLAAC+KLHEMGAFTDMLLPDKGSGE++EK +QNDEG+ LPGTARHREFYPEG
Sbjct: 877  RLAQQAVCLAACRKLHEMGAFTDMLLPDKGSGEEKEKAEQNDEGDALPGTARHREFYPEG 936

Query: 1018 VADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE 1077
            VADIL+GEWILSG+D C  SKL HL+MYT+KC N G SKDPFLTQVSDFAVLF +ELDAE
Sbjct: 937  VADILKGEWILSGKDACNNSKLLHLYMYTIKCENVGHSKDPFLTQVSDFAVLFGTELDAE 996

Query: 1078 LA-------------------SLKNFHVRLMSIVLD------------------------ 1094
            +                     L  F ++++S+ +D                        
Sbjct: 997  VVVSICITASRSYLSIITRFLPLITFVLQVLSMSMDLFIARTVTTKASLVFRESIDITES 1056

Query: 1095 ------------------VDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKIT 1136
                              VDVEP TTPWDPAKAYLFVP+V DKS DPMN++DW LVE I 
Sbjct: 1057 QLTSLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSSDPMNQIDWHLVETII 1116

Query: 1137 KTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQF 1196
              DAW NPLQ+ARPDVYLGTNERTLGGDRREYGFGKLRHG+AFGQKSHPTYGIRGA+AQF
Sbjct: 1117 GADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGLAFGQKSHPTYGIRGAVAQF 1176

Query: 1197 DVVKASGLVPDREAMQIHN-ADMPT-GKLMMADSCANAGDLEGRIVTAAHSGKRFYVESI 1254
            DVVKASGLVP+R++M+  N  +M T GKLMMAD+C +  DL GRIVTAAHSGKRFYV+SI
Sbjct: 1177 DVVKASGLVPNRDSMETQNHINMTTKGKLMMADTCTSPDDLVGRIVTAAHSGKRFYVDSI 1236

Query: 1255 RYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY 1287
            RYEMTAE+SFPRKEGYLGPLEYSSYADYYKQKY
Sbjct: 1237 RYEMTAENSFPRKEGYLGPLEYSSYADYYKQKY 1269



 Score = 1452 bits (3760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 722/958 (75%), Positives = 804/958 (83%), Gaps = 70/958 (7%)

Query: 1037 SKLFHLFMYTVKCVNNGISKDPFL--TQVSDFAVLFSSELD---AELASLKNFHVRLMSI 1091
            ++   L  + ++ ++  +S D F+  T  +  +++F   +D   ++L SLK+FHVRLMSI
Sbjct: 1014 TRFLPLITFVLQVLS--MSMDLFIARTVTTKASLVFRESIDITESQLTSLKSFHVRLMSI 1071

Query: 1092 VLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPD 1151
            VLDVDVEP TTPWDPAKAYLFVP+V DKS DPMN++DW LVE I   DAW NPLQ+ARPD
Sbjct: 1072 VLDVDVEPSTTPWDPAKAYLFVPMVGDKSSDPMNQIDWHLVETIIGADAWKNPLQKARPD 1131

Query: 1152 VYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAM 1211
            VYLGTNERTLGGDRREYGFGKLRHG+AFGQKSHPTYGIRGA+AQFDVVKASGLVP+R++M
Sbjct: 1132 VYLGTNERTLGGDRREYGFGKLRHGLAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDSM 1191

Query: 1212 QIHN-ADMPT-GKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEG 1269
            +  N  +M T GKLMMAD+C +  DL GRIVTAAHSGKRFYV+SIRYEMTAE+SFPRKEG
Sbjct: 1192 ETQNHINMTTKGKLMMADTCTSPDDLVGRIVTAAHSGKRFYVDSIRYEMTAENSFPRKEG 1251

Query: 1270 YLGPL-----------------------------------------EYSSYADYYKQ--- 1285
            YLGPL                                         +Y S+     Q   
Sbjct: 1252 YLGPLEYSSYADYYKQKYDEASVVTCNSEGYRECPMESDNSMLILPDYRSFLSLPAQLRV 1311

Query: 1286 ------------KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
                        +YGV+L +K+QPLIRGRGVSYCKNLLSPRFEHSE  E E EE  DKTY
Sbjct: 1312 HMATGSLLLLLIRYGVDLAYKQQPLIRGRGVSYCKNLLSPRFEHSEGHEDETEETHDKTY 1371

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
            YVFLPPELC +HPLPGSLVRGAQRLPSIMRRVESMLLA+QLK+ INYPV ASKILEALTA
Sbjct: 1372 YVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKNMINYPVQASKILEALTA 1431

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            ASCQETFCYERAELLGDAYLKWVVSRFLFLK+PQKHEGQLTRMRQQMVSN+VLY+YALSK
Sbjct: 1432 ASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQKHEGQLTRMRQQMVSNMVLYRYALSK 1491

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GLQSYI ADRFAPSRWAAPGVLPVFDEDTKD +SSLFDQE+S+   K     N +E+ED+
Sbjct: 1492 GLQSYILADRFAPSRWAAPGVLPVFDEDTKDEESSLFDQERSIF--KAERMDNTDEFEDE 1549

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
             MEDGELE DSSSYRVLSSKTLADVVEALIGVYYVEGGK+AANHLMKWIGI +E DP+E+
Sbjct: 1550 -MEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIHIEIDPDEM 1608

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVG 1633
             C ++P+ VP+S+LRSVDF ALE AL IKFKD+GLL+E+ITHASRPSSGVSCYQRLEFVG
Sbjct: 1609 ECITKPSNVPDSILRSVDFDALEGALNIKFKDKGLLIESITHASRPSSGVSCYQRLEFVG 1668

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DAVLDHLIT+HLFFSYT+LPPGRLTDLRAAAVNNENFARV VKH LH+HLRHGSSAL++Q
Sbjct: 1669 DAVLDHLITRHLFFSYTDLPPGRLTDLRAAAVNNENFARVTVKHNLHLHLRHGSSALEKQ 1728

Query: 1694 IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            I+DFVKEV +EL KPGFNSFGLGDCKAPKVLGDI+ESIAGAIFLDSGR+T+VVW+VFQPL
Sbjct: 1729 IKDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDILESIAGAIFLDSGRNTAVVWKVFQPL 1788

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            L PMVTPETLPMHPVRELQERCQQQAEGLEY+ASR+GNLATVEV+IDGVQVG AQNPQKK
Sbjct: 1789 LHPMVTPETLPMHPVRELQERCQQQAEGLEYRASRAGNLATVEVFIDGVQVGAAQNPQKK 1848

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            MAQKLAARNALA LKEKE ++ +EK DE  K+ KNG QTFTRQTLNDICLRRNWPMP YR
Sbjct: 1849 MAQKLAARNALAALKEKEESKIQEKNDE--KETKNGNQTFTRQTLNDICLRRNWPMPFYR 1906

Query: 1874 CVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            CV EGGPAHAKRFT+AVRVNTTDKGWTDECVGE MPSVKKAKDSAAVLLLEL+NK YS
Sbjct: 1907 CVSEGGPAHAKRFTFAVRVNTTDKGWTDECVGEAMPSVKKAKDSAAVLLLELINKLYS 1964



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 7/60 (11%)

Query: 21 YWLDACEDILI--DEFVNFDTSVVQDSVDNTSNQDSLSNDFFGGIDHILDSIKNGSGLPN 78
          YWLDACEDI I  D+ ++FD S   D   N +NQD     FFGGID I DSIKNG+GLP+
Sbjct: 26 YWLDACEDISISCDDIIDFDVSNDSDQQPNNNNQD-----FFGGIDRIFDSIKNGAGLPD 80


>gi|374259480|gb|AEZ02176.1| Dicer [Arabidopsis thaliana]
          Length = 1033

 Score = 1491 bits (3860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 766/1091 (70%), Positives = 879/1091 (80%), Gaps = 85/1091 (7%)

Query: 1    MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVN-FDTSVVQDSVDNTSNQDSLS 56
            ME E R + I       + SYWLDACEDI   LID+ V+ FD S V  +V+ +++++ + 
Sbjct: 3    MEDEPREATI-------KPSYWLDACEDISCDLIDDLVSEFDPSSV--AVNESTDENGVI 53

Query: 57   NDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVD 116
            NDFFGGIDHILDSIKNG GLPN       NG  D+                         
Sbjct: 54   NDFFGGIDHILDSIKNGGGLPN-------NGVSDTNS----------------------- 83

Query: 117  RKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSE--DRFS 174
                      +N   V  +    ++    KENG+ ++ G  D       +F  E  D+  
Sbjct: 84   ---------QINEVTVTPQV---IAKETVKENGLQKNGGKRD-------EFSKEEGDKDR 124

Query: 175  KRARVSVCKNE-SQYSSRGQYCSS-DKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RG   +S + DR   RKR R+ D+ G    +  ++RE  N   
Sbjct: 125  KRARVCSYQSERSNLSGRGHVNNSREGDRFMNRKRTRNWDEAG----NNKKKRECNN--- 177

Query: 233  RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV--- 289
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G N+EC+ K    
Sbjct: 178  ----YRRDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKVSGGNRECDVKAEEN 233

Query: 290  -GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
              K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+S+  DL  Q
Sbjct: 234  KSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIKSVHKDLMSQ 293

Query: 349  NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVM 408
            N+KML+VFLVPKVPLVYQQAEVIR QT + VGHYCGEMGQDFWD++RWQREF++KQVLVM
Sbjct: 294  NRKMLSVFLVPKVPLVYQQAEVIRNQTCFQVGHYCGEMGQDFWDSRRWQREFESKQVLVM 353

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTA 468
            TAQILLNILRHSII+ME I+LLILDECHHAVKKHPYSLVMSEFYHTT K+KRP++FGMTA
Sbjct: 354  TAQILLNILRHSIIRMETIDLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPAIFGMTA 413

Query: 469  SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            SPVNLKGVSSQVDCAIKI NLE+KLDS VCTIKDRKELEKHVPMPSE+VVEYDKAA++WS
Sbjct: 414  SPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVPMPSEIVVEYDKAATMWS 473

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LHE +KQM  AVEEAAQ+SSR+SKWQFMGARDAGAK+ELRQVYGVSERTESDGAANLI K
Sbjct: 474  LHETIKQMIAAVEEAAQASSRKSKWQFMGARDAGAKDELRQVYGVSERTESDGAANLIHK 533

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
            LRAINY L ELGQWCAYKV QSFL+ALQ+DER N+Q+DVKFQESYLS+VVSLLQCEL+EG
Sbjct: 534  LRAINYTLAELGQWCAYKVGQSFLSALQSDERVNFQVDVKFQESYLSEVVSLLQCELLEG 593

Query: 649  AVSKKDAKVVDS-ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
            A ++K A  V   ENG      +E+EEGEL D  VVSGGEHVD +IGAAVADGKVTPKVQ
Sbjct: 594  AAAEKVAAEVGKPENG---NAHDEMEEGELPDDPVVSGGEHVDEVIGAAVADGKVTPKVQ 650

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
            SLIK+LLKYQHT DFRAI+FVERVVAALVLPKVFAELPSLSF++ AS+IGHNNSQEM++ 
Sbjct: 651  SLIKLLLKYQHTADFRAIVFVERVVAALVLPKVFAELPSLSFIRCASMIGHNNSQEMKSS 710

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            QMQ+TI+KFRDG VTLLVATSVAEEGLDIRQCNVV+RFDLAKTVLAYIQSRGRARKPGSD
Sbjct: 711  QMQDTISKFRDGHVTLLVATSVAEEGLDIRQCNVVMRFDLAKTVLAYIQSRGRARKPGSD 770

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            YILM+ERGN+SHA FLRNARNSEETLRKEAIERTDLSHLKDTSRLIS+DAVPGTVY+VE+
Sbjct: 771  YILMVERGNVSHAAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISIDAVPGTVYKVEA 830

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA+VSLNSAVGL+HFYCSQLP DRY+ILRPEF ME+HEKPGG TEYSC+LQLPCNAPFE
Sbjct: 831  TGAMVSLNSAVGLVHFYCSQLPGDRYAILRPEFSMEKHEKPGGHTEYSCRLQLPCNAPFE 890

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG+  EK DQ+DEGEP+PGT
Sbjct: 891  ILEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGQDAEKADQDDEGEPVPGT 950

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFA 1067
            ARHREFYPEGVAD+L+GEW+ SG++ C  SKLFHL+MY V+CV+ G SKDPFL++VS+FA
Sbjct: 951  ARHREFYPEGVADVLKGEWVSSGKEVCESSKLFHLYMYNVRCVDFGSSKDPFLSEVSEFA 1010

Query: 1068 VLFSSELDAEL 1078
            +LF +ELDAE+
Sbjct: 1011 ILFGNELDAEV 1021


>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
          Length = 690

 Score = 1084 bits (2804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/657 (81%), Positives = 584/657 (88%), Gaps = 20/657 (3%)

Query: 1286 KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            +YGV+L  K+QPLI+GRGVSYCKNLLSPRFE    Q GE E +LDKTYYVFLPPELC +H
Sbjct: 43   RYGVDLNCKQQPLIKGRGVSYCKNLLSPRFE----QSGESETVLDKTYYVFLPPELCVVH 98

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
            PL GSL+RGAQRLPSIMRRVESMLLA+QLK+ I+YP+P SKILEALTAASCQETFCYERA
Sbjct: 99   PLSGSLIRGAQRLPSIMRRVESMLLAVQLKNLISYPIPTSKILEALTAASCQETFCYERA 158

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFA
Sbjct: 159  ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFA 218

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            PSRW+APGV PVFDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD S
Sbjct: 219  PSRWSAPGVPPVFDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLS 273

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
            SYRVLSSKTLADVVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPES
Sbjct: 274  SYRVLSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTLKNVNVPES 333

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            VL+S+DF  LE ALK +FK++GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT+HL
Sbjct: 334  VLKSIDFVRLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHL 393

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            FF+YT+LPPGRLTDLRAAAVNNENFARVAVKHKLH++LRHGSSAL++QIR+FVKEV  E 
Sbjct: 394  FFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTES 453

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG+DT+  W+VFQPLL PMVTPETLPM
Sbjct: 454  SKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM 513

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            HPVRELQERCQQQAEGLEYKASRSGN ATVEV+IDGVQVGVAQNPQKKMAQKLAARNALA
Sbjct: 514  HPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALA 573

Query: 1826 VLKEKETAEAKEKGDENGK-----------KRKNGTQTFTRQTLNDICLRRNWPMPLYRC 1874
             LKEKE AE+KEK   NG             +KNG Q FTRQTLNDICLR+NWPMP YRC
Sbjct: 574  ALKEKEIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRC 633

Query: 1875 VREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWYS 1931
            V+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLNK +S
Sbjct: 634  VKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNKTFS 690


>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/1718 (32%), Positives = 841/1718 (48%), Gaps = 221/1718 (12%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ++V E   ++NTIA L TG+GKT+IAV+LI+ I   ++  + K L +FL P V LV
Sbjct: 40   RRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLV 99

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            +QQ  VI++ T + V  Y G MG D W+   W++E   + VLVMT QILL+ LR +  ++
Sbjct: 100  HQQFNVIKDHTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRL 159

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
              I L+I+DECH A   HPY+ +M EFYH +  + +P  FGMTASPV  KGVSS VDC  
Sbjct: 160  GTICLMIIDECHRATGNHPYTKIMKEFYHKS--DSKPKXFGMTASPVIRKGVSSSVDCEC 217

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAA 544
            +I +LES LD+ V  I+D+KE+E +VP   E+ + Y+ A        Q  +++  +E   
Sbjct: 218  QIADLESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPAMP------QTMELKAKIE--- 268

Query: 545  QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
                  + W    A  + ++E ++  Y   +         L      I Y L ELG  CA
Sbjct: 269  ------ALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGIMCA 322

Query: 605  YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF 664
            Y+  +      +N    N + DV ++ES+L     L +  LV G     ++  +++EN  
Sbjct: 323  YEAIKVLF---ENVSVPNEESDV-YRESFLQYKHFLEEALLVIG-----ESLSLENENVP 373

Query: 665  VEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRA 724
              G                         +  AV  G ++PK+  L+++   +  +     
Sbjct: 374  TLGFD-----------------------LWKAVELGYISPKLFELLQLFESFGVSRQVLC 410

Query: 725  IIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTL 783
            +IFVER++AA V+ ++  ++ +LS    + + G + S      ++Q ET+  F  G++ L
Sbjct: 411  LIFVERIIAANVIERIVKKVENLSHFTVSYVTGCDASVGALAPKVQKETLELFCHGKLNL 470

Query: 784  LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
            L +T V EEGL +  C+ V+RFDL KTV +Y+QSRGRAR+  S YIL++ERGNL     L
Sbjct: 471  LFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALL 530

Query: 844  RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
             +   S+ ++   A+ R DL    D   L     +    Y VE+TGA V+ +S+VGL++ 
Sbjct: 531  FDVIRSDRSMTDAAMSR-DL----DACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQ 585

Query: 904  YCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQA 963
            YC +LP D+Y   +P F +       G   Y C+L LP  A  + + GP   +  L++Q 
Sbjct: 586  YCKKLPGDKYFSPKPIFQLSY-----GEGSYECQLTLPPTAALQTIVGPSTRNSNLSKQL 640

Query: 964  VCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            VCL ACKKLH+MGA  D LLP      + +   +++      G+ + +E +       L 
Sbjct: 641  VCLEACKKLHQMGALNDHLLPSVEEISESDMGLKSNASTSRAGSTKRKELHGRTAIRALS 700

Query: 1024 GEW--------ILSGRDGCTGSKLFHLFMYTVKCVNNGISKDP--------FLTQVSDFA 1067
            G W          + +   + S ++ ++   V  + + +  D          L+++   +
Sbjct: 701  GTWEEQVEGTTFQAYKFDFSCSVIYEVYSGFVLLIESKLDDDVSNFELELYLLSKMVKAS 760

Query: 1068 VLFSSE--LDAE-LASLKNFHVRLMSIVL--------------DVDVEPYTTP-WDPAKA 1109
            V F  E  LDAE +   K F     + +               D  ++  T P W  +  
Sbjct: 761  VSFGGEVHLDAEQITKAKCFQELFFNGLFGRLFIGSKTTGKKRDFLLQKDTNPLWISSNM 820

Query: 1110 YLFVPV-VSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREY 1168
            YL +PV + D S   + ++ W  +      D+  + ++  + +  L           R Y
Sbjct: 821  YLLLPVDLPDDSTHDLWKIHWRAI------DSCVSVVEFLKKNSSLDA--------ERNY 866

Query: 1169 GFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADS 1228
            G G +         S  T     ++  F                             A+ 
Sbjct: 867  GAGAISDSSPSRNNSTETGSNAASVIHF-----------------------------ANC 897

Query: 1229 CANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYG 1288
              +   L+ R+V A H+G+ + +  +    +AES F       GP +Y ++ADY+ ++YG
Sbjct: 898  VLDVHSLKDRVVLAIHTGRIYSIVEVVSNTSAESPFDGNSDK-GPPDYITFADYFNKRYG 956

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            + L F KQPL+R +      NLL    +   ++   G        +V +PPEL     +P
Sbjct: 957  ISLSFPKQPLLRLKQSHNPHNLLVNFKDEGFDKLPSGPAFKRPQMHVHMPPELVLSMDVP 1016

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-----VPASKILEALTAASCQETFCYE 1403
              +++ +  LPS++ R ES++LA QL+ +INY      + +S ILEALT     E F  E
Sbjct: 1017 KGVLKSSYLLPSLIHRFESLMLASQLRKEINYHSNSLGISSSLILEALTTLGSCENFSLE 1076

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R ELLGD+ LK+ VS  LFLK+P+KHEGQL+  RQQ++ N  L+      GLQ YI+   
Sbjct: 1077 RLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSA 1136

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F P RW APG         K G     D  +    DK  T       ED  +  G+    
Sbjct: 1137 FDPRRWVAPGQCTNRPVPCKCG----VDTVEVPLHDKFCT-------EDPKVVLGKC--C 1183

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
               +R + SKT+AD  EALIG YYV+GG  AA H+MKW+GI V  D   V      A + 
Sbjct: 1184 DKGHRWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLR 1243

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
               L   +   LE  +   F  +GLL+EA+TH S    GV+ CYQRLEF+GD+VLD LIT
Sbjct: 1244 SCPLGDTEIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLIT 1303

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVL 1702
             H + +Y+++ PG LTDLR+A+VNNENFA+VAV+  L  HL+H S  L  QI ++VK + 
Sbjct: 1304 WHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLS 1363

Query: 1703 E--ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
            E  +  KP      L   K PKVLGD+VESIAGAI +D+  +   VW++++PLL P VTP
Sbjct: 1364 ESQDTGKP------LHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTP 1417

Query: 1761 ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQK 1817
            + L + P+REL E C      ++ K +R G     E+ +   D + +G      +K A+ 
Sbjct: 1418 DKLELPPLRELIELCDSLGYFIKDKCTRKGETFHAELRLQLQDSLLIGEGYERTRKAARG 1477

Query: 1818 LAARNALAVLKEKETAEAKEKGDENGKKRK------------------------------ 1847
             AA   LA L+ +  + ++       KKRK                              
Sbjct: 1478 EAAHRLLAQLETRGISYSR----SGSKKRKQNPSHDESAMVLPSSVNCSTDACDPNVETP 1533

Query: 1848 -----NGTQTFTRQTLNDICLRRNWPMPLYRCVR-------EGGPAHAKR-----FTYAV 1890
                 N  +   R TL ++C +  WPMP +  V        E G    KR     F   +
Sbjct: 1534 VIGPINLKKGGPRSTLFELCKKLQWPMPTFNTVENKSRVQIEIGEGLEKRKGFNSFLSNI 1593

Query: 1891 RVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
             +   + G+  EC GE     K + DSA++++L+ L +
Sbjct: 1594 TLQIPNAGYV-ECEGEARADKKSSFDSASLVMLQELQQ 1630


>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
 gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
          Length = 1686

 Score =  716 bits (1847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/1491 (33%), Positives = 749/1491 (50%), Gaps = 223/1491 (14%)

Query: 295  AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
            AK  +P    R YQ DV ++A K+N I  L TG GKT+IA++LI+S  + L    +K +A
Sbjct: 350  AKTMIP----RGYQKDVFQRALKENIIVNLGTGTGKTMIAIMLIQSFEDRLSMPQEKRIA 405

Query: 355  VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
            VFL P V LV QQA  I   T   VG Y G+ G D W  ++WQ E D+ QVLVMT Q+ L
Sbjct: 406  VFLAPTVNLVIQQARAIESFTVLKVGDYYGDKGVDSWSVKQWQAEVDSHQVLVMTPQVFL 465

Query: 415  NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            N L  S +K+E + +L++DECHHA K HPY+L+M   YH +  + +P +FGMTASPV  K
Sbjct: 466  NALGTSALKLEFVEILVMDECHHAHKNHPYALIMKTHYHVSCLKSKPKIFGMTASPVIQK 525

Query: 475  GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA-SLWSLHEQL 533
            GVSS  DC  K+  LES LD+ V T++D+ E+E++ P P++    YD+   S  S+   L
Sbjct: 526  GVSSSYDCNCKLTVLESILDAKVYTVEDKSEIEEYYPNPTQYKEYYDRPKQSFSSIQTDL 585

Query: 534  KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
            + ++  +   A             A +    E+  ++    +R            L +IN
Sbjct: 586  EILKDRLNSEA-------------ACNCSEYEQQNKINKSIDRL-----------LLSIN 621

Query: 594  YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
            + L +LG   A    +   +  ++     ++ DV  +E            E V+ ++ ++
Sbjct: 622  HCLVDLGLLPALLAVEILKSRNKSTFHLKWKPDVSLEE------------EEVKTSLKER 669

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              + V S   F +  +      E + S                   G ++PKV  L+ +L
Sbjct: 670  FLQNVSSIPRFSQVSSRSYPTLEEMTS-------------------GTLSPKVLVLLDVL 710

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETI 773
             + +   + R I+FVERV+ A+ L K+ + L  LS ++   + G  ++      Q QE +
Sbjct: 711  ERLRGMTNMRCIVFVERVIVAMALAKLISGLSFLSHLRCDYMTGVRDTDARNPTQQQEVL 770

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
              F  G++ LL+ATSVAEEGLD++ C  VIRFD+ +T+ +++QSRGRAR   S Y+ ++E
Sbjct: 771  HSFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQSRGRARNLLSTYVWLLE 830

Query: 834  RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG---TVYQVESTGA 890
             GN+           SE  +  + I R  +         I+ +A P      ++VES GA
Sbjct: 831  TGNVEQLNLFNQLCTSERVVEDQVIFRNYMD--------ITREAPPEGDLEFFRVES-GA 881

Query: 891  VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLE 950
              S   +V  IH YC++L  DRY   +P+F  +          + C ++ P NAP   +E
Sbjct: 882  CKSSQDSVSFIHEYCARL-GDRYYNAKPKFSFK--------DSFVCTVEFPPNAPLRSVE 932

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFT-DMLLPDKGSGEQQEKVDQNDEGEPLPGTAR 1009
            GP+  + +LA++A CL AC+KL++MG    D L PD    +++++  + +E      + +
Sbjct: 933  GPLRRTEQLAKKAACLQACRKLYDMGEVRRDTLCPDVDDFDEEDQPMRKNE------SGK 986

Query: 1010 HREFYPEGVADILQGEWI-------LSGRDGC-----TGSKLFHLFMYTVKCVNNGISKD 1057
             +E +      I +G W+       L     C       S+ +  F + V CV +    D
Sbjct: 987  RKEIFSTAKPLIFEGSWVFNESGVQLQFYKICFVVEPPESRTYSNFGFLVNCVIDAEVTD 1046

Query: 1058 PFLTQVSDFAVLFSS-------ELDA-ELASLKNFHVRLMSIVLD----VDVEPYTTPWD 1105
              +T  S   V+ +        +LDA ++ + K +   L++   +        P    WD
Sbjct: 1047 SEVTLFSRNRVVNARVHRVGPIQLDANQVKAAKAYQELLLNGAFNRLARCSGSPQEILWD 1106

Query: 1106 PAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDR 1165
             ++A+L +PV  D      + +DW  V       AW          VY     RTL  + 
Sbjct: 1107 KSQAFLVLPVHDDN-----DSIDWTSVH----ATAW----------VY-----RTLCSN- 1141

Query: 1166 REYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMM 1225
              +       G   G+K+H                               ADM    L  
Sbjct: 1142 --FSPSSPMDGDGVGEKTH-------------------------------ADM----LCT 1164

Query: 1226 ADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ 1285
            A+   ++  L+  +V   H+G+ F V  +    TA S  P K G+       +Y DYYK 
Sbjct: 1165 ANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLP-KRGF-------TYIDYYKD 1216

Query: 1286 KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            KY   L   +QPL++ +      NLL       +EQEG  +E      +V LPPELC   
Sbjct: 1217 KYQRTLRLPEQPLLKAKPTHAFHNLLI----RPKEQEGSRQE----ESFVELPPELCLCL 1268

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
             +   L+R    +PS + R  S + AIQL+  +   +PA+KILEA+T+  C E F YE  
Sbjct: 1269 EIKSGLIRSLYFVPSFLHRFTSTVCAIQLRSPLWPWIPAAKILEAITSKKCHEEFSYESL 1328

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGD++LK+VV++ LFL Y +KHEGQL+  R +   N  LYQ A S G+  YI+ + F 
Sbjct: 1329 ELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRSRATCNAALYQLAKSSGIAEYIRDEEFN 1388

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            PS W  PG+L          DSS    ++   E+    ++NY                +S
Sbjct: 1389 PSNWTGPGML--------TSDSSKCRHQQGSFEN----EENY------------FSSCAS 1424

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
             +R +  K LADVVEALIG Y    G  +A  LMK + I +E D   +   +R A +P  
Sbjct: 1425 GHRGIRRKALADVVEALIGAYLATSGPPSAMELMKQLDIDIEFDIGLLA-SARQASLPAE 1483

Query: 1586 VLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
              + +     +LE  L+ KF++R LLVEAITHAS+P+  + CYQRLEF+GD VLD L+++
Sbjct: 1484 SFQHLQASLESLEHKLQYKFQNRSLLVEAITHASQPNC-LLCYQRLEFLGDGVLDFLVSR 1542

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
            HLF ++  LPPG LTDLR+AAVNN+ FAR+ V+H LH HL+HGS  LD +IR FV+ V E
Sbjct: 1543 HLFETHPGLPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGSVELDCEIRKFVQNVKE 1602

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
               KP  + F   D  APKVLGD++ESI GAIF+D+  D   +W+V  P +
Sbjct: 1603 ---KPDASCF--EDLSAPKVLGDLLESITGAIFVDTNFDLERLWRVVLPFV 1648


>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 1393

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1568 (33%), Positives = 782/1568 (49%), Gaps = 235/1568 (14%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQL+ LE+A K+NT+ FLETG+GKTLIA++L+RS  + L R+    +AVFLVP
Sbjct: 16   PLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQL-RKPSPFVAVFLVP 74

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQAE ++  T   VG Y G+MG DFWD   W+RE +  +VLVMT  ILLN LRH
Sbjct: 75   QVVLVTQQAEALKMHTDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLVMTPAILLNGLRH 134

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGV 476
            S  ++  I +LILDECHHA  KHPY+ +M+EFYH   +  K   P +FGMTASP+  KG 
Sbjct: 135  SFFRLSMIKVLILDECHHARGKHPYACIMTEFYHQQLSLGKSDLPRIFGMTASPIKSKGG 194

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
            +S+++    I  LES L+S V T+    EL   VP+ +     Y +    ++L+EQL   
Sbjct: 195  NSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFYIRKDIPYALYEQLANA 254

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
               ++   + S   S        +    E  R+               + +   A+ Y L
Sbjct: 255  LKVLKSKHEQSLENSDL------NPSNVEPTRK--------------RISKAFLALMYCL 294

Query: 597  GELGQWCAYKVAQSFLTALQNDERANYQLDV---KFQESYLSKVVSLLQCELVEGAVSKK 653
             ELG W  +K A+S L+ +++D      LD+      +S+ S  + LL            
Sbjct: 295  DELGLWLTWKAAES-LSWMEDDFSPWETLDIFGEAIVKSFCSDALKLL------------ 341

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
             A  V S   +   G N                      + A +A G +TPKV  LI  L
Sbjct: 342  -ANPVKSGCSYGSIGDN----------------------LEADMAAGLMTPKVVCLIASL 378

Query: 714  LKYQHTEDFRAIIFVERVVAALV-LPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-E 771
            L+Y+  ED R I+FVER+V+A+     +   LP  +  K+  + G  +  + ++ + Q E
Sbjct: 379  LEYRSIEDIRCIVFVERIVSAVALQTLLSLLLPKYTCWKTKYIAGSTSGLQTQSKKKQNE 438

Query: 772  TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
             + +FR G+V ++VATS+ EEGLD++ CN+VIRFD + TV ++IQSRGRAR   SDYILM
Sbjct: 439  IVEEFRCGKVNIIVATSILEEGLDVQSCNLVIRFDPSSTVCSFIQSRGRARMKNSDYILM 498

Query: 832  IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAV 891
            ++ G+ +  + L+    S E +R E++    L  +   S            Y VESTGAV
Sbjct: 499  VKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSD------YDEESYYVESTGAV 552

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG 951
            V+L+S+VGLI+FYCS+LPSD Y    P +  E           +C L LP ++P +    
Sbjct: 553  VTLSSSVGLIYFYCSRLPSDCYFKPTPRWDKE-----------TCTLHLPKSSPLQTFSS 601

Query: 952  PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHR 1011
                  + ++Q  CL ACK+LH+ GA TD L+P   +   +E V Q    +PL       
Sbjct: 602  K--DDAKYSKQRACLEACKQLHKCGALTDNLVPQIVA---EESVAQEIGNKPL------- 649

Query: 1012 EFYPEGVADILQGEWILSGRDGC---TGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAV 1068
                    D  Q  ++      C     S ++H ++  +        K  F   +S   +
Sbjct: 650  --------DDEQPIYVPPEFVHCCPHNSSVVYHCYLIEL--------KQNFHYDISAHNI 693

Query: 1069 LFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELD 1128
            + +   + E      F V+ M   LDVD       +D    Y+ +  +S + V    +  
Sbjct: 694  VLAMRTELE------FEVQSMCHDLDVD----RGSFDVNFKYVGIIKLSPEQVLLSRQFQ 743

Query: 1129 WDLVEKITKTDAWTNPLQRARPDVYLGTNERTLG-GDRREYGFGKLRHGMAFGQKSHPTY 1187
              +  K+     WTN L           NE  LG G R +Y                P+ 
Sbjct: 744  RTIF-KVLLNHTWTNKLSE--------NNEICLGDGPRVDYLLL-------------PST 781

Query: 1188 GIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCANAG-----DLEGRIVTA 1242
            G  G +  +++V  S LV  +E   +H   + + K +  D    +G      L+  +V  
Sbjct: 782  G--GELISWEIV-LSVLVSSQEYC-VHRG-ISSSKDVSYDVPTKSGLVCICRLQNSVVYT 836

Query: 1243 AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGR 1302
             H+G  + + S+  E+   S    ++      E  +Y +YYK ++G++L F+KQPL+RG+
Sbjct: 837  PHNGHVYCITSVLSELNGNSLLKIRKN-----EMMAYKEYYKVRHGIDLRFEKQPLLRGK 891

Query: 1303 GVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI--HPLPGSLVRGAQRLPS 1360
             +    N +  RF   +EQ GE    L     V LPPELC I   P+  + +     LP 
Sbjct: 892  KIFPVHNYIK-RFRKHKEQ-GESRNSL-----VELPPELCSIIMSPISVNTLYSYSFLPF 944

Query: 1361 IMRRVESMLLAIQLKDKINY------PVPASKILEALTAASCQETFCYERAELLGDAYLK 1414
            IM R+ESML+A  LK K+N        +P +K+LEA+T   CQE F  E  E LGD++LK
Sbjct: 945  IMHRLESMLIASNLK-KLNSDHCMQNDIPTTKVLEAITTKKCQEKFNLESLETLGDSFLK 1003

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            +   + LF  +   HEG LT  + ++VSN  L +      +  +I+ + F P  W  PG 
Sbjct: 1004 YATGQHLFRTFQNDHEGLLTLKKDRIVSNAALRRRGCEHKISGFIRDEAFDPQNWDIPG- 1062

Query: 1475 LPVFDEDTKD----GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVL 1530
                  DT +     +  LF   K   + K                           R +
Sbjct: 1063 ------DTHEVYQLREEVLFSGRKVYVQRK---------------------------RKI 1089

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD--PEEVGCPSRPACVPESVLR 1588
             SK +ADVVEALIG Y   GG+ AA   +  IGI+V  D  P E     RP  V   V +
Sbjct: 1090 KSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPYE-----RPFRV--DVHK 1142

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFF 1647
             ++   LE  LK  F DR LL+EA+TH S     +  CYQRLEF+GD+VLD+ IT HL+ 
Sbjct: 1143 LINVGHLESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAITVHLYN 1202

Query: 1648 SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK--EVLEEL 1705
             Y  + P  LTD+R+A+V+N+ ++R A+K +LH  + H S  L + I   V+  E L   
Sbjct: 1203 KYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSHDLHKHISSAVQNFETLSSE 1262

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
               G+ S    +   PKVLGD++ES+AGAI++DSG D  +V++  +PLL+P+V+PETL  
Sbjct: 1263 ATYGWES----EISFPKVLGDVIESLAGAIYVDSGYDKEIVFRSIRPLLEPLVSPETLKK 1318

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGN---LATVEVYIDG-VQVGVAQNPQKKMAQKLAAR 1821
            HP REL E CQ++   L+   +   N     TVEV ++G +      +  ++  +K+A++
Sbjct: 1319 HPRRELNELCQKENYKLKKTVTSRVNGRSYVTVEVEVNGRIFKHTEISLDRETGEKVASK 1378

Query: 1822 NALAVLKE 1829
              L  LKE
Sbjct: 1379 EVLKSLKE 1386


>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
 gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
          Length = 1388

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/1569 (33%), Positives = 774/1569 (49%), Gaps = 243/1569 (15%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQL+ LE+A ++NTI FLETG+GKTLIA++L+RS  + L R+    +AVFLVP+V LV Q
Sbjct: 12   YQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYAH-LLRKPSPFIAVFLVPQVVLVKQ 70

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
            QAE +   T   VG Y GEMG DFWDA  W+++ +  +VLVMT QILL+ LRHS  K++ 
Sbjct: 71   QAEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQYEVLVMTPQILLDGLRHSFFKLDC 130

Query: 427  INLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
            I +LI DECHHA  KHPY+ +++EFYH   T      P +FGMTASP+  KG  S++   
Sbjct: 131  IKVLIFDECHHARGKHPYACILTEFYHRQLTYRDSALPRIFGMTASPIKSKGAKSELAYW 190

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY---DKAASLW-SLHEQLKQMEVA 539
             +I  LE+ + S V T      L + +P  +     Y   D   +++ SL E LK ++  
Sbjct: 191  TEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFYKPMDIPYAIYASLAENLKILK-- 248

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA-INYALGE 598
                   S      + +   DA           V E T     +  I K+ + + Y L E
Sbjct: 249  -------SKYECNLKLLDLTDA-----------VVEST-----SKRISKMHSTLMYCLDE 285

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG W A K AQ  L+  +++  +  +LD+                               
Sbjct: 286  LGVWLALKAAQ-ILSCHESEFFSCGKLDI------------------------------- 313

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSG-----GEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              EN   E G N     + LD+ + SG     GE+ +    A +  G +T K+  LI  L
Sbjct: 314  SGENIVKEFGLNA---SQALDNCINSGPKWSIGENAE----ADIEAGLLTTKIFCLIDSL 366

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFVKSASLIGHNN----SQEMRTFQ 768
            L Y+   D R IIFV RV+AA+VL  +  EL P  +       I  NN    SQ  +T  
Sbjct: 367  LDYRDIRDLRCIIFVNRVIAAIVLQTLLGELLPRYNSGWKTQYIAGNNFRLQSQSRKT-- 424

Query: 769  MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
              E + +FR+G+V ++VATS+ EEGLD++ CN+V+RFD + TV ++IQSRGRAR   SDY
Sbjct: 425  QNEIVEEFREGKVNIIVATSILEEGLDVQSCNLVVRFDPSTTVSSFIQSRGRARMQNSDY 484

Query: 829  ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
            +LM++ G++S  + L N   S + +RKE+I      H       I  +   G  Y VEST
Sbjct: 485  LLMVKSGDVSTHSRLENYLASGDLMRKESIR-----HGSVPCSPIRSEFHEGEYYFVEST 539

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP--CNAPF 946
             A+V+L S+V LI+FYCS+LPSD Y    P  ++++  +        C L LP  C+   
Sbjct: 540  NALVTLTSSVSLIYFYCSRLPSDGYFKPTPRCLIDKEME-------RCTLLLPKSCSIHT 592

Query: 947  EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE---QQEKVDQNDEGEP 1003
              +EG V    ++ +Q  CL ACK+LH++GA  D L+PD    E   QQ      D+  P
Sbjct: 593  ISVEGNV----KIIKQKACLEACKQLHKIGALNDNLVPDIVVEETVAQQSGNGPYDDEHP 648

Query: 1004 LPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQV 1063
            +        F PE V    Q       +  C   +L   F+Y +               V
Sbjct: 649  M-------YFPPELVGQASQKS---EAKYYCYLIELNQNFVYEIP--------------V 684

Query: 1064 SDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDP 1123
             +F +   SEL++++  L            D+D+E      D     + +  + +  + P
Sbjct: 685  HNFVLAMRSELESDILGL------------DLDLEA-----DRGLLMVKLKYIGEIHLTP 727

Query: 1124 MNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKS 1183
                     E +     +   + +   D  +   E  L G        KLR+G       
Sbjct: 728  ---------ETVIMCRKFLITVLKVLVDHSIDKLEDILKG-------LKLRNGPEIDYLL 771

Query: 1184 HPTYG-IRGAIAQFDVVKASGLVPDREAMQIH-NADMPTGKLMM--ADSCANAGDLEGRI 1239
             P  G  +     +D V  S L      ++ H N  +     ++   D       L+  +
Sbjct: 772  LPLVGSCQKPSIDWDAV-TSVLFSYENVLEDHKNCPLKEAACVIQTKDGVVCKCTLQNSV 830

Query: 1240 VTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLI 1299
            V   H+GK ++++     +   S    + GY     + SY +YYK ++G++L F +Q L+
Sbjct: 831  VYTPHNGKVYFIDGTLDHLNGHSLLELRNGY-----HKSYMEYYKDQHGIKLHFDQQLLL 885

Query: 1300 RGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLVRGAQR 1357
            RGR +   +N L+ R    +E++ +         YV LPPELC  F+ P+  S       
Sbjct: 886  RGRHIFPLQNYLN-RCRQQKEKDSQNA-------YVELPPELCHIFMSPISISSFYSFTF 937

Query: 1358 LPSIMRRVESMLLAIQLKD------KINYPVPASKILEALTAASCQETFCYERAELLGDA 1411
            +PSIM R+ES+L+A  LK         +  +P  K+LEA+T   CQE F  E  E LGD+
Sbjct: 938  VPSIMHRLESLLIASNLKKLHLDHCMQSVAIPTIKVLEAITTKKCQEKFHLESLETLGDS 997

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
            +LK+ V + LF  Y   HEG L+  + +++SN  L +      +  +I+ + F P  W  
Sbjct: 998  FLKYAVGQQLFKTYQNHHEGLLSIKKDKLISNATLCRLGCDSKIPGFIRNESFDPKNWLI 1057

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
            P        D   G  SL       +E+ L   +                      R L 
Sbjct: 1058 P--------DEISGCYSL-------SEEILSNGRKMY---------------IKRRRKLK 1087

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE--SDPEEVGCPSRPACVPESVLRS 1589
             K +ADVVEALIG Y   GG+ A    + WIGI+ +  + P E G    P        + 
Sbjct: 1088 EKMIADVVEALIGAYLSTGGEIAGLLFLDWIGIKADFLNMPYERGFEMNPE-------KY 1140

Query: 1590 VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFS 1648
            V+   LE  LK  F+D  LLVEA+TH S     +  CYQRLEF+GD+VLD+LIT HL+  
Sbjct: 1141 VNICHLESLLKYSFRDPCLLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITVHLYEK 1200

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV---KEVLEEL 1705
            Y  + PG LTD+R+A+VNN+ +A+ AV+  LH ++ H S  L + I   V   KE   E 
Sbjct: 1201 YPGMSPGLLTDMRSASVNNDCYAQSAVREGLHKYILHASQKLHKDIVSTVANCKEFSSE- 1259

Query: 1706 LKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLP 1764
                 ++FG   +   PKVLGD++ES+AGAIF+DSG +  VV+   +PLL+P++TPET+ 
Sbjct: 1260 -----STFGWESEISFPKVLGDVIESLAGAIFVDSGYNKEVVFNSIRPLLEPLITPETIR 1314

Query: 1765 MHPVRELQERCQQQA-EGLEYKASRSGNLA--TVEVYIDGVQVG-VAQNPQKKMAQKLAA 1820
            +HP REL E CQ+Q  +  +   SR+  ++  TVEV  +GV     +   ++K A++LA+
Sbjct: 1315 LHPTRELTELCQKQHFDRRKPVVSRNNGMSCVTVEVEANGVVFKHTSAAAERKTAKRLAS 1374

Query: 1821 RNALAVLKE 1829
            +  L  LK+
Sbjct: 1375 KEVLRALKD 1383


>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
          Length = 1657

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 484/1573 (30%), Positives = 763/1573 (48%), Gaps = 189/1573 (12%)

Query: 290  GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
            G  +   EK P   AR YQL++ ++A ++N I +L TG GKT IA+LLI  + + L R +
Sbjct: 39   GSSTRTSEKDPRRIARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEL-SHLIRSS 97

Query: 350  KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVM 408
            +  + VFL P V LV QQA+VI +   + V  YCG  G    ++   W+RE +  +V VM
Sbjct: 98   QNGICVFLAPTVALVQQQAKVIEDSLDFKVRVYCG--GSKILNSHYDWEREMEEYEVFVM 155

Query: 409  TAQILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGM 466
            T +I L  L H  IKM+ + LLI DECHHA  K  H Y+ +M  FY   +  KRP +FGM
Sbjct: 156  TPEIFLRNLYHCYIKMDCVELLIFDECHHAQVKSDHSYAEIMRVFY-KANDPKRPRIFGM 214

Query: 467  TASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASL 526
            TASPV  KG   Q + +  I +LE  LD+ V ++++R+EL   V  P   +  Y      
Sbjct: 215  TASPVVGKGACHQQNLSRSINSLEKLLDAKVYSVENREELHAFVSSPLVNIYYYGP---- 270

Query: 527  WSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
                       VA   ++   S  S+ + +  +   A  +++  + V   T+      L 
Sbjct: 271  -----------VANGSSSSFMSYSSRLEDVKRKCIVALGQVKSEHEVLLATKK----LLF 315

Query: 587  QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
            +    I + L  LG W A +  +  L+   N ER+                      EL+
Sbjct: 316  RMHENILFCLESLGVWGALQACKILLSG-DNSERS----------------------ELI 352

Query: 647  EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
            E A  +++ K     + ++       +  E+  S     G   D++    + D   + K+
Sbjct: 353  EAA--ERNPKNDSLSDRYLN------QAAEIFASGCKKDGGISDMLNVDILEDPFFSKKL 404

Query: 707  QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMR 765
              LI IL  ++   + + IIFV R+V A  L  +   L  L++ K   L+G H+  + M 
Sbjct: 405  LRLIGILSSFRQQLNMKCIIFVNRIVIARSLSYILQNLNFLAYWKCDFLVGVHSKLRSMS 464

Query: 766  TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
               M   + KFR G + LL+AT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P 
Sbjct: 465  RKTMNHILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQ 524

Query: 826  SDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQV 885
            S+Y  +++ GN      +   R  E  + +E   R+            + D+   ++Y+V
Sbjct: 525  SEYAFLVDSGNEKELGLINEFRKDENRMNREIYSRSSNE---------TFDSHEESIYRV 575

Query: 886  ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
             STGA ++   ++ L+H YCS+LP D Y   +P+F    ++  GG     C + LP NAP
Sbjct: 576  ASTGASITSGRSISLLHEYCSKLPHDDYFDPKPQF--SYYDDLGGTV---CHVNLPSNAP 630

Query: 946  FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---EQQEKVDQNDEGE 1002
              ++     SS   A++  CL A ++LH++GA +D LLP +G G   EQ+  ++ +D   
Sbjct: 631  IPQIVSRSQSSKDAAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESGLNSSDSDS 690

Query: 1003 PLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQ 1062
                T+R RE +       L+  W        TGS    L+ Y +KC     + DP    
Sbjct: 691  SEDETSR-RELHEMIFPAALKESW--------TGSGYLVLYCYHIKC-----TPDPRDRN 736

Query: 1063 VSDFAVLFSSEL--DAELASLKNFHVRLMSIVLDVD----VEPYTTPWDPAKAY--LFVP 1114
              +F +   + L  +AE   L+    R  S+++++     VE        A+++  +F+ 
Sbjct: 737  YKEFGLFVKAPLPQEAERMGLELHLARGRSVMVNLIPSGVVELLEEEITQAESFQEMFLK 796

Query: 1115 VVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLR 1174
            V+ D+            +E + +     N   R+    YL                    
Sbjct: 797  VILDR------------LEFVQEYIPLRNNASRSVSSSYLLL------------------ 826

Query: 1175 HGMAFGQKSHPTYGIRGAIAQFDVVK---ASGLVPDREAMQIHNADMPTGKLMMADSCAN 1231
              M F    H   G       ++V++   +S +  +   + +         LM+ D    
Sbjct: 827  -PMIF----HDNEG--SLFIDWNVIRRCLSSKIFQNDACLIVKGTASSDTHLMLYDGHRR 879

Query: 1232 AGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVEL 1291
            + D+E  +V   + G+ F+V +I       S + +  G+      SS+ ++ K K+G+ L
Sbjct: 880  SSDIENSLVYVPYKGEFFFVTNIERGKNGHSQY-KNSGF------SSHFEHLKTKFGIHL 932

Query: 1292 IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
             + +QPL+R + +    N L  R    + ++ E   +  + Y++ LPPE+C +  +  S 
Sbjct: 933  NYPEQPLLRAKPLFLLHNWLHNR----KREDSEARHL--EEYFIELPPEVCQLKIIGFSK 986

Query: 1352 VRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVPA------SKILEALTAASCQETFCYE 1403
              G+    LPSIM R+E++L+AI+LK ++    PA      ++ILEALT   CQE    E
Sbjct: 987  DIGSSISLLPSIMHRLENLLVAIELKCRLAAAFPAGAEVTANRILEALTTEKCQERISLE 1046

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E+LGD++LK+ V+R+LFL + +  EG+LTR R  +V N  L + A  K LQ YI+   
Sbjct: 1047 RLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKNLQVYIRDQP 1106

Query: 1464 FAPSRW---AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            F PS++     P      +E +KD  S           D    +   NE +         
Sbjct: 1107 FEPSQFYLLGRPCPRICNEETSKDIHS----------HDDATNNAKANETK--------- 1147

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
               S  +  L  KT++DVVEAL+G + V+ G  AA   +KWIGIQVE +   V      +
Sbjct: 1148 --CSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASLVTDALMAS 1205

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHL 1640
                 +  S+D  AL+++L  +F  +GLL++A+ H S    G  CYQRLEF+GDAVLD+L
Sbjct: 1206 NAYVLLADSIDISALQNSLGHRFLHKGLLLQALVHPSYHKHGGGCYQRLEFLGDAVLDYL 1265

Query: 1641 ITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE 1700
            IT +L+ +Y  L PG+LTDLR+  V NE FA VAV    +  L   S++L   I+ +V  
Sbjct: 1266 ITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSTSLLSDIKSYVHF 1325

Query: 1701 VLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
            +      P F    L   + PK LGD+VES  GA+ +D+G D + VW++    +DP+++ 
Sbjct: 1326 I----KAPPFERDSLEQPRCPKALGDLVESSVGAVLVDTGFDMNCVWKIMLSFIDPIMSF 1381

Query: 1761 ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ---VGVAQNPQKKMAQK 1817
                + P+R++ E CQ     L++ +S+     +V+  + G        A N +KK A K
Sbjct: 1382 SGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYYSVKAEVKGGNFHATASAANRRKKDAAK 1441

Query: 1818 LAARNALAVLKEK 1830
            +AA   L  LK K
Sbjct: 1442 IAANLILTKLKAK 1454



 Score = 41.6 bits (96), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 1851 QTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAV 1890
            +T  R  L ++C   +W  P + C+ E GP+H K FTY V
Sbjct: 1565 KTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKV 1604


>gi|168021275|ref|XP_001763167.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
 gi|162685650|gb|EDQ72044.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
          Length = 961

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/512 (56%), Positives = 357/512 (69%), Gaps = 42/512 (8%)

Query: 783  LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATF 842
             L    + +EGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM+ERGNL H  F
Sbjct: 16   FLAFVVLPKEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMLERGNLQHEAF 75

Query: 843  LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIH 902
             RNA+NSEETLRKEAIERTDL   ++ + L S+D   G +YQV +TGAVVS+NSAVGLIH
Sbjct: 76   FRNAKNSEETLRKEAIERTDLGEKRENAILASIDIGEGEIYQVPATGAVVSMNSAVGLIH 135

Query: 903  FYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQ 962
            FYCSQLPSDRYS+LRPEFIM + E   G   YSC+LQLPCNAPFE +EGP         +
Sbjct: 136  FYCSQLPSDRYSLLRPEFIMNKIEDQRGAIRYSCRLQLPCNAPFEAVEGP---------E 186

Query: 963  AVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADIL 1022
               L   +K+HEMGAFTDMLL +KGS E+  K++ ++EGE LPGT+RHRE+YPEG+ADIL
Sbjct: 187  FCVLEGLQKMHEMGAFTDMLLSNKGSREEAAKLEGSEEGESLPGTSRHREYYPEGIADIL 246

Query: 1023 QGEWILSGRDGCT--GSKL--------------------FHLFMYTVKCVNNGI---SKD 1057
            +G+ I++ +D  T  GSK+                       F     C N+ +   + +
Sbjct: 247  KGDRIVAEKDSDTKEGSKISLPNPTLLITMSWKKRDLDAIRRFRKRHCCSNSQVLTMTIN 306

Query: 1058 PFL--TQVSDFAVLFSSELD---AELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLF 1112
             F+  T  +  ++ F  +L+    EL  LK+FHVRLMSIVLDV+VEP TT WDPAKAYLF
Sbjct: 307  LFVARTMTTRASLKFFGDLNLSLQELTELKSFHVRLMSIVLDVNVEPATTRWDPAKAYLF 366

Query: 1113 VPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGK 1172
             PV+   + DP + +DW ++ +  +TD+W+NPLQRA PDV LGT+ER LGGDRREYGFGK
Sbjct: 367  APVLHKDASDPKDLVDWVVMRRTIETDSWSNPLQRASPDVNLGTDERALGGDRREYGFGK 426

Query: 1173 LRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNAD--MPTGKLMMADSCA 1230
            LR  +AFGQ +HPTYG RGA AQFDVVKA+GL+P  + ++        P GKL++ D   
Sbjct: 427  LRCSLAFGQGAHPTYGARGAKAQFDVVKATGLLPTSDMVEETTVQEVPPEGKLLIVDGFV 486

Query: 1231 NAGDLEGRIVTAAHSGKRFYVESIRYEMTAES 1262
                L GRIVTA HSGKR YV+S+   +TA S
Sbjct: 487  EVEVLVGRIVTAVHSGKRLYVDSV-LALTAAS 517



 Score =  277 bits (709), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 154/319 (48%), Positives = 202/319 (63%), Gaps = 25/319 (7%)

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            Y+R E + DA L+ +++  LF  + +   G+LT +R   V+N    + A++  L  +++ 
Sbjct: 524  YERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQHALEKGLQSYIQA 583

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNSFG----------------LGDCKAPKVLGDIVE 1729
               A  R     V    +E L+ G +S                  L D +A  V  +   
Sbjct: 584  DRFAPSRWAAPGVPPAFDEDLRDGDDSDKESKPEVEREVVEIVGRLTDLRAAAVNNENFA 643

Query: 1730 SIAGA----IFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYK 1785
             +A      + L  G  T++  QVF+PLL PMV+PETLP+HPVR LQERCQQ+AEGLEYK
Sbjct: 644  RVAVKHSYHLHLRHG-STALETQVFEPLLQPMVSPETLPIHPVRGLQERCQQEAEGLEYK 702

Query: 1786 ASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAK---EKGDEN 1842
             SR+ ++ATVEVY+DGVQ+G  Q+ QKKMAQKL ARNAL  LK+KE  + K   E GD N
Sbjct: 703  VSRAESVATVEVYVDGVQIGSTQSAQKKMAQKLGARNALVKLKDKEVIKVKAEAENGDLN 762

Query: 1843 -GKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTD 1901
             GK  KNG   FTR+T+ND+CL+R WPMP Y+CV E GPAHAK+FT++VRV TT  GWT+
Sbjct: 763  AGKSSKNGHTNFTRKTINDLCLKRQWPMPQYKCVLESGPAHAKKFTFSVRVLTTTDGWTE 822

Query: 1902 ECVGEPMPSVKKAKDSAAV 1920
            ECVGEPM SVKKAKDSAA+
Sbjct: 823  ECVGEPMASVKKAKDSAAL 841



 Score =  176 bits (446), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 88/99 (88%)

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALTAASCQETF YERAELL DAYL+WVVS  LFLK+P KHEGQLTRMRQ++VSN VLYQ+
Sbjct: 512  ALTAASCQETFSYERAELLSDAYLEWVVSHRLFLKFPSKHEGQLTRMRQKIVSNSVLYQH 571

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
            AL KGLQSYIQADRFAPSRWAAPGV P FDED +DGD S
Sbjct: 572  ALEKGLQSYIQADRFAPSRWAAPGVPPAFDEDLRDGDDS 610


>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
          Length = 1576

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 474/1572 (30%), Positives = 728/1572 (46%), Gaps = 257/1572 (16%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            +  + K P   AR YQLD+ ++A ++N I +L TG GKT IAVLLI  + + +++ ++  
Sbjct: 19   TRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSR-- 76

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQ---REFDTKQVLVMT 409
                         +QA VI   T + V  Y G  G++  D Q W+   REF+        
Sbjct: 77   -------------EQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFE-------- 114

Query: 410  AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
                                                    EFY++ S EK P VFGMTAS
Sbjct: 115  ----------------------------------------EFYNSNSVEKFPRVFGMTAS 134

Query: 470  PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
            P+  KG S++++    I +LE  L + VC++ D +ELE  V  P   V  Y         
Sbjct: 135  PIIGKGGSNKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPVN----- 188

Query: 530  HEQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            H  L  + +  ++     S R  +      +D+  K  L+ ++ + E        N+I  
Sbjct: 189  HSNLTTICIKELDSLKLQSERMLRASLCDFKDSQKK--LKSLWRLHE--------NII-- 236

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVK-----FQESYLSKVVSLLQC 643
                 + L ELG + A + A++FL+    D+    ++D+      F   YL+   S+L  
Sbjct: 237  -----FCLQELGSFGALQAARTFLS-FDGDKLDRREVDLNGSTSSFAHHYLNGATSILSR 290

Query: 644  ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
               +G+                  G+ ++E+ E                      +   +
Sbjct: 291  NKTDGS----------------HAGSFDLEKLE----------------------EPFFS 312

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQ 762
             K   LI +L +Y   E+ + I+FV+R+  A  +  +   L  L F K   L+G H+ S+
Sbjct: 313  NKFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSK 372

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
             M   +M   + +F  G V LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR
Sbjct: 373  NMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRAR 432

Query: 823  KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV 882
               S Y++++ER N SH   L      E  + +E   RT              D +   +
Sbjct: 433  MTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMF---------DCLEENI 483

Query: 883  YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
            YQV++TGA +S   +V L+H YC  LP D +    P F         G     C+L LP 
Sbjct: 484  YQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFY-----IDGIEGIICRLILPP 538

Query: 943  NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGE 1002
            NA F + +G  C S   A++  CL AC KLH++GA TD LLP  GS + +  V  N    
Sbjct: 539  NAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNN 598

Query: 1003 PLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQ 1062
             +   +   E +   +  +L+         G     L +L  Y VK +   I +D    +
Sbjct: 599  KVEDDSLREELHEMLIPAVLKP-------SGLKLDSLSNLHFYYVKFI--PIPED---RR 646

Query: 1063 VSDFAVLFSSELDAELASLK-NFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSV 1121
               F +   + L  E  +L+ + H+    IV           ++  KA       S  S+
Sbjct: 647  YQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHLGKIAFEKEKA------SSCSSM 700

Query: 1122 DPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQ 1181
               ++     ++ +     +T+P  +   DV L  N            F  L   +   Q
Sbjct: 701  MLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLEINST----------FYLL---LPIKQ 747

Query: 1182 KSHPTYGIRGAIAQFDVVK--ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRI 1239
            K    YG R  I    V +  +S +  D   + +H +      L + D   +  D+ G +
Sbjct: 748  K---CYGDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSV 804

Query: 1240 VTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQP 1297
            V + H+   F+V+ I  E+ A S            E+S  +YA+++K+++ +EL   +QP
Sbjct: 805  VFSPHNNIFFFVDGILDEINAWS------------EHSGATYAEHFKERFRIELSHPEQP 852

Query: 1298 LIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
            L++ + +   +NLL  R    E  E EG E+L+  ++V LPPELC +  +  S   G+  
Sbjct: 853  LLKAKQIFNLRNLLHNRL--PETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSL 908

Query: 1358 LPSI--MRRVESMLLAIQLKDKI--NYP----VPASKILEALTAASCQETFCYERAELLG 1409
                  M R+E++L+AI+LKD +  ++P    + AS ILEALT   C E    ER E+LG
Sbjct: 909  SLLPSLMYRLENLLVAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLG 968

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRW 1469
            DA+LK+VV R  F+ Y    EGQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++
Sbjct: 969  DAFLKYVVGRHKFITYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQF 1028

Query: 1470 AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV 1529
             APG  P                 K V    +    +  +   D+ E+  L   + S+  
Sbjct: 1029 FAPG-RPC----------------KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHW 1070

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRS 1589
            L  K +ADVVE+LIG + VEGG  AA   + WIGI V+ +   +      + +  S++  
Sbjct: 1071 LHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDY 1130

Query: 1590 VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY 1649
             D   LE+ +  KFK +GLL++A  H S       CYQRLEF+GDAVL+++IT +L+ +Y
Sbjct: 1131 TDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTY 1190

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF---------VKE 1700
             ++ PG++TDLR+ AV N++ A  AV+  +H HL   S+ L   I  F          K+
Sbjct: 1191 PDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKD 1250

Query: 1701 VLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
            +LEE   P            PK LGDIVES  GA+ LDSG + + VW+V   LL P++T 
Sbjct: 1251 LLEE---PA----------CPKALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTF 1297

Query: 1761 ETLPMHPVRELQERCQQQA--EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQ 1816
              +  +P+REL+E CQ      GL       G     VEV I   + +  A N   K A+
Sbjct: 1298 ANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAAR 1357

Query: 1817 KLAARNALAVLK 1828
            K AA+  L+ LK
Sbjct: 1358 KFAAQETLSKLK 1369


>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
 gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
          Length = 1719

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 384/1171 (32%), Positives = 574/1171 (49%), Gaps = 197/1171 (16%)

Query: 697  VADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
            +  G ++PKV  L+ +L + +   + R I+FVERV+ A+ L K+ + L  LS ++   + 
Sbjct: 695  MTSGTLSPKVLVLLDVLERLRGITNMRCIVFVERVIVAMALAKLISRLSFLSHLRCDYMT 754

Query: 757  GHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
            G  ++      Q QE +  F  G++ LL+ATSVAEEGLD++ C  VIRFD+ +T+ +++Q
Sbjct: 755  GVRDTDARNPTQQQEVLDAFAGGKLNLLIATSVAEEGLDVQACCAVIRFDVCQTLRSHVQ 814

Query: 817  SRGRAR-KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
            SRGRAR +  S Y+ ++E GN+           SE                         
Sbjct: 815  SRGRARNRLSSTYVWLLETGNVEQLNLFNQLCTSER------------------------ 850

Query: 876  DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
                           VV    +V  IH YC++L  DRY   +P+F  +          + 
Sbjct: 851  ---------------VVEDQDSVSFIHEYCARL-GDRYYNAKPKFSFK--------DSFV 886

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAF-TDMLLPDKGSGEQQEK 994
            C ++ P NAP   +EGP+  + +LA++A CL AC+KL++MG    D L PD    +++++
Sbjct: 887  CTVEFPPNAPLRSVEGPLRRTEQLAKKAACLQACRKLYDMGEVRPDTLCPDVDDFDEEDQ 946

Query: 995  VDQNDEGEPLPGTARHREFYPEGVADILQGEWI-------LSGRDGC-----TGSKLFHL 1042
              + +E      + + +E +      I +G W+       L     C       S+ +  
Sbjct: 947  SMRKNE------SGKRKEIFSTAKPLIFEGSWVFNESGVQLQFYKICFVIEPPESRTYSN 1000

Query: 1043 FMYTVKCVNNGISKDPFLTQVSDFAVLFSS-------ELDA-ELASLKNFHVRLMSIVLD 1094
            F + V CV +    D  +T  S   V+ +        +LDA ++ + K +   L++   +
Sbjct: 1001 FGFLVNCVIDAEVTDSEVTLFSRNRVVNARVHRVGPIQLDANQVKAAKAYQELLLNGAFN 1060

Query: 1095 ----VDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARP 1150
                    P    W+ ++A+L +PV  D      + +DW  V               A  
Sbjct: 1061 RLARCSGSPQEILWNKSQAFLLLPVHDDN-----DSIDWTSVH--------------ATA 1101

Query: 1151 DVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREA 1210
             VY     RTL  +   +       G   G+K+H                          
Sbjct: 1102 GVY-----RTLCSN---FSPSSPMDGDGVGEKTH-------------------------- 1127

Query: 1211 MQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGY 1270
                 AD+    L  A+   ++  L+  +V   H+G+ F V  +    TA S  P K G+
Sbjct: 1128 -----ADV----LCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLP-KRGF 1177

Query: 1271 LGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNL-LSPRFEHSEEQEGEGEEIL 1329
                   +Y DYYK KY   L   +QPL++ +      NL + P+     EQEG  +E  
Sbjct: 1178 -------TYIDYYKDKYQRTLRLPEQPLLKAKPTHAFHNLPIRPK-----EQEGSRQE-- 1223

Query: 1330 DKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILE 1389
                +V LPPELC    +   L+R    +PS + R  S + AIQL+  +   +PA+KILE
Sbjct: 1224 --ESFVELPPELCLCLEIKSGLIRSLYFVPSFLHRFTSTVCAIQLRSPLWPWIPAAKILE 1281

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            A+T+  C E F YE  ELLGD++LK+VV++ LFL Y +KHEGQL+  R +   N  L+Q 
Sbjct: 1282 AITSKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRSRATCNAALHQL 1341

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A S G+  YI+ + F PS W  PG+L      T D       Q                 
Sbjct: 1342 AKSSGIAEYIRDEEFNPSNWTGPGML------TSDSSKCRHQQ---------------GS 1380

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD 1569
            YE+   E+      ++ +R +  K LADVVEALIG Y    G  +A  LMK +GI +E D
Sbjct: 1381 YEN---EENYFSSCANGHRGIRRKALADVVEALIGAYLATSGPPSAMELMKQLGIDIEFD 1437

Query: 1570 PEEVG--CPSRPACVPESVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC 1625
               +G    +R A +P    + +     +LE  L+ KF++R LLVEAITHAS+P+  + C
Sbjct: 1438 ---IGLLASARQASLPAESFQHLQASLESLEHKLQYKFQNRSLLVEAITHASQPNC-LLC 1493

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GD VLD L+++HLF ++  LPPG LTDLR+AAVNN+ FAR+ ++H LH HL+H
Sbjct: 1494 YQRLEFLGDGVLDFLVSRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVLRHGLHQHLQH 1553

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            GS  LD +IR FV+ V E   KP  + F   D  APKVLGD++ESI GAIF+D+  D   
Sbjct: 1554 GSVELDCEIRKFVQNVKE---KPDASCF--EDLSAPKVLGDLLESITGAIFVDTNFDLEK 1608

Query: 1746 VWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVG 1805
            +W+V  PLL P+VTP TL  HPVR L E C ++   + +  + +        + +   V 
Sbjct: 1609 LWRVVLPLLSPLVTPATLRFHPVRILMELCARKGMKVSFFRTEATTTEVRVTFGEESLVE 1668

Query: 1806 VAQNPQKKMAQKLAARNALAVLKEKETAEAK 1836
             +Q   +K A+  AA   LA L+EK   E K
Sbjct: 1669 TSQEKPRKSAKIDAALKMLASLQEKVEKEMK 1699



 Score =  208 bits (529), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/222 (47%), Positives = 142/222 (63%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
           YQ DV ++A K+N I  L TG GKT+IA++LI+S    L    +K +AVFL P V LV Q
Sbjct: 359 YQKDVFQRALKENIIVNLGTGTGKTMIAIMLIQSFEERLSMPQEKRIAVFLAPTVNLVIQ 418

Query: 367 QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
           QA  I   T   VG Y G+ G D W   +WQ E D+ QVLVMT Q+ LN L  S +K+E 
Sbjct: 419 QARAIESFTVLKVGDYYGDKGVDSWSVNQWQAEVDSHQVLVMTPQVFLNALGTSALKLEF 478

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
           + +L++DECHHA K HPY+L+M   YH +  + +P +FGMTASPV  KGVSS  DC  K+
Sbjct: 479 VEVLVMDECHHAHKNHPYALIMKTHYHVSCLKSKPKIFGMTASPVIQKGVSSSYDCNRKL 538

Query: 487 CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
             LES LD+ V T++D+ E+E++ P P++    YD+    +S
Sbjct: 539 TVLESILDAKVYTVEDKSEVEEYYPNPTQYKEYYDRPKQRFS 580


>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
          Length = 1502

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 454/1636 (27%), Positives = 743/1636 (45%), Gaps = 269/1636 (16%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK--KMLAVFLVPKVP 362
            R YQL++   A KKN+I  L TG+GKT I++LLI+ + + ++   K      VF+V  VP
Sbjct: 15   RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKGGSKRTVFVVNTVP 74

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            LV+QQA  I++ T + VG Y G MG D+W  + WQ E +  +VLV+ AQI L+++ H+ +
Sbjct: 75   LVHQQAAAIQQHTPFEVGKYEGSMGVDYWTDEHWQNELEKHEVLVVVAQIFLDLILHAKL 134

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT--SKEKRPSVFGMTASPVNLKGVSSQV 480
             + ++NLLI+DECHHA   HP   +M  + +    S EK P + G+TA  V+ K    +V
Sbjct: 135  PLSSVNLLIMDECHHATGSHPMREIMRAYENLKQHSPEKLPRIMGLTACVVHRKCKRREV 194

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
               ++  +LE+ +D  + T  D + + K+   P E V+ +   +      E +K     +
Sbjct: 195  LKYME--SLEAAMDCALVTSVDPETVLKYTTGPKEKVICFYTESITSDYQETVKAQLAGL 252

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            E    +        F+  +   A++++++                  K++ I + + +LG
Sbjct: 253  ECDIITDC------FINYK---ARKQIKK------------------KVKNIEHIMSDLG 285

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
             WC  +  +  +  L  DE    + D K +E     ++ LL+  L E  V+         
Sbjct: 286  DWCVARAIKYEIEHL--DETEGMEEDPKIRE-----ILKLLKERLREVYVA--------- 329

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
                           EL +  + +  EH+             T KV+ L++I  K    +
Sbjct: 330  --------------CELKEKGMANPVEHI-------------TFKVKRLLEIFSKC--NK 360

Query: 721  DFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHNNS-------QEMRTFQM 769
            +   +IFVER   A +L  +  E+    P  SFVK + ++G N+         E+   + 
Sbjct: 361  EVFGLIFVERRNTAKILYDLLLEIAKQNPEFSFVKPSYVVGCNSRPGIDIRLAELELRKQ 420

Query: 770  QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
            +ET+  FR G    L++TSV EEG+DIR+CNVV+RFD+ +   AY+QSRGRAR   S Y+
Sbjct: 421  KETLENFRKGETNFLISTSVLEEGVDIRKCNVVVRFDMPQNYRAYVQSRGRARAKPSVYL 480

Query: 830  LMIERGNLSHAT-FLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
            LM+E   +S     +   R  E++L+     R +L   + T +  + D            
Sbjct: 481  LMVEEAKVSEMLECIGVYREIEDSLQYLCHGR-NLPTAQTTRKHFAEDEYIKPYEPYGPV 539

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-E 947
            G  ++ NSA+ L++ YC +LPSD+++   PE + E  E   G T  +  ++LP  AP  +
Sbjct: 540  GPKITSNSAIQLVNLYCGKLPSDKFTDNLPEVVEEVKE---GMT--TVGIRLPIMAPLKD 594

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQ--QEKVDQNDEGEPLP 1005
             + G   ++  LA+++  L  C KLHEMG     L P + + +   +  VD   E EP+P
Sbjct: 595  MIYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKESNDDSLVEGLVDLPPE-EPVP 653

Query: 1006 ------GTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV----NNGIS 1055
                  GT + R  + + +      E    G   C  S     F  + + V    +  IS
Sbjct: 654  EGTSESGTRKRRRVHAKDLCYPFSNE---HGGSYCLYSIDIKPFGQSGESVTIDSSTCIS 710

Query: 1056 KDPFLTQ----VSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYL 1111
            K  F+ +     S F + FS   D                                    
Sbjct: 711  KIGFICKEGLVSSPFPLFFSKWGDV----------------------------------- 735

Query: 1112 FVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFG 1171
               +V+ + V P+ +LD  L +KI K         R   +  +  NE  +  D  +  + 
Sbjct: 736  ---MVNVREVGPLTDLDTSLFDKIKK-------FHRLVFENLIELNENLMSFDPEKSKWD 785

Query: 1172 KLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCAN 1231
                 + F +       +   I  FD +K   L       + HN +    +    D+   
Sbjct: 786  VFIVPLDFSEII--DLNMLNEIYSFDSIKPVML-------KSHNQNTKFVRSKFEDALIY 836

Query: 1232 AGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVEL 1291
                         S + +YV  I  E+   ++FP  EG  G   Y SY  Y+ ++YG+E+
Sbjct: 837  PQ-------YGIPSNQMYYVSHIFDELNPCNTFP--EGKKG---YESYERYFLERYGLEI 884

Query: 1292 IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLP---PELCFIHPLP 1348
              K QPL+  + +    N L    + ++E++G             +P   PE C + P+ 
Sbjct: 885  KDKNQPLLEAKHIPKELNYLKKIPKKAKEKKGN-----------LVPRFVPEFCGLIPIK 933

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQ--LKDKINYPVPASKILE----------------- 1389
             SL      +PSI  R+ S  L  +  +K KI  P   +++L+                 
Sbjct: 934  ASLWWQIMCMPSIFHRLNSFNLMHEFIVKTKITSPAIKNEVLDFSWTKKFIYELLGSSEN 993

Query: 1390 -----------------------ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 1426
                                    L  AS  + F  ER ELLGD++LK+V    LFL+  
Sbjct: 994  TVPIFLDRKKQEYIHPFSMLHAFTLKEASEDKEFNLERLELLGDSFLKFVTGEALFLRDE 1053

Query: 1427 QKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPG--VLPVFDEDTK 1483
              HEG+L++ R ++V N  L++ A  KGL+  I A    P +  + PG  + P F+E  +
Sbjct: 1054 SYHEGRLSQSRGKLVCNKTLFRLACQKGLEGKIAAKVLNPKKNGSIPGFRIKPEFEESLR 1113

Query: 1484 DGD--SSLFDQEKSVAEDKLGTDKN--YNEYEDDDMEDGELEGDSSSYRV-----LSSKT 1534
              +     + Q  +  +D +G  K   +    DD  +D + E   S Y       +S K+
Sbjct: 1114 SLEVPHDFWHQVPNTVKD-VGDLKEAVFALMSDDASKDEKAEKKGSCYNPWTEHEVSDKS 1172

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS-------RPACVPESVL 1587
            +AD VEA+IG Y +  G +AA   + W+G+ V  D   +  P        R  C  +  +
Sbjct: 1173 IADCVEAIIGAYLLVCGNEAAAAFLHWLGVGVFRDNSLLMEPKTVRTARVRKECAQDLTI 1232

Query: 1588 --RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
              +      LE  +   F+DR  +V+A+TH+S  ++ V+ CYQRLEF+GDAVLD+L+T H
Sbjct: 1233 FYKKAVLDRLEKKIGYTFRDRSFIVQAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCH 1292

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
            +F  +T+  PG+L+DLR+  V N+   R A K KLH HL H +  L+  I  F+  + ++
Sbjct: 1293 IFCRFTDYSPGQLSDLRSYFVKNDTLGRAAAKGKLHQHLLHLNPKLEASIDKFLSILHQD 1352

Query: 1705 LLKPGFNSF-GLGDC---KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
             L    N+   + DC   + PK LGD+VE+I GA++LDS R   V WQV + +L  ++  
Sbjct: 1353 PLGEELNTEDDVQDCEDVEIPKALGDMVEAIIGAVYLDSNRSLKVAWQVIERILGDLLNT 1412

Query: 1761 --ETLPMHPVRELQERCQQQAEGLEYKASRSGN-LATVEVYIDGVQVGVAQNPQKKMAQK 1817
              +T+ ++P+R+L E    + +    K    G+  +T  V + G     A     ++A+K
Sbjct: 1413 SIQTIQLNPIRQLLEEVPGEKQVEFVKGEDDGSEKSTYVVKVKGFGTFTASGKNYRVAKK 1472

Query: 1818 LAARNALAVLKEKETA 1833
              A  AL  +  ++ A
Sbjct: 1473 KVAAIALKEIHNQQAA 1488


>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
          Length = 1502

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 450/1635 (27%), Positives = 734/1635 (44%), Gaps = 267/1635 (16%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK--KMLAVFLVPKVP 362
            R YQL++   A KKN+I  L TG+GKT I++LLI+ + + ++   K      VF+V  VP
Sbjct: 15   RSYQLELFNCALKKNSILVLGTGSGKTFISILLIKELGHQIRESLKGGSKRTVFVVNTVP 74

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            LV+QQA  I++ T + VG Y G MG D+W  + WQ E +  +VLV+ AQI L+++ H+ +
Sbjct: 75   LVHQQAAAIQQHTPFEVGKYEGSMGVDYWTDEHWQNELEKHEVLVVVAQIFLDLILHAKL 134

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT--SKEKRPSVFGMTASPVNLKGVSSQV 480
             + ++NLLI+DECHHA   HP   +M  + +    S EK P + G+TA  V+ K    +V
Sbjct: 135  PLSSVNLLIMDECHHATGSHPMREIMRAYENLKQHSPEKLPRIMGLTACVVHRKCKRREV 194

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
               ++  +LE+ +D  + T  D + + K+   P E V+ +   +      E +K     +
Sbjct: 195  LKYME--SLEAAMDCALVTSVDPETVLKYTTGPKEKVICFYTESITSDYQETVKAQLAGL 252

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            E    +        F+  +   A++++++                  K++ I + + +LG
Sbjct: 253  ECDIITDC------FINYK---ARKQIKK------------------KVKNIEHIMSDLG 285

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
             WC  +  +  +  L  DE    + D K +E     ++ LL  +L E  V+         
Sbjct: 286  DWCVARAIKYEIEHL--DETEGMEEDPKIRE-----ILKLLSEKLREVYVA--------- 329

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
                           EL +  + +  EH+             T KV+SL++I  K    +
Sbjct: 330  --------------CELKEKGMANPVEHI-------------TFKVKSLLEIFSKC--NK 360

Query: 721  DFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHNNS-------QEMRTFQM 769
            +   +IFVE    A +L  +  E+    P  SFVK + ++G N+         E+   + 
Sbjct: 361  EVFGLIFVESRNTAKILYDLLLEIAKQNPEFSFVKPSYVVGCNSRPGIDIRLAELELRKQ 420

Query: 770  QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
            +ET+  FR G    L++TSV EEG+DIR+CNVV+RFD+ +   AY+QSRGRAR   S Y+
Sbjct: 421  RETLENFRRGETNFLISTSVLEEGVDIRKCNVVVRFDMPQNYRAYVQSRGRARAKPSVYL 480

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
            LM+E   +S            E   +      +L   + T +  + D            G
Sbjct: 481  LMVEEAKVSEMLECIGVYKEIEDSLQYLCHGRNLPTAQTTRKHFAEDEYIKPYEPYGPVG 540

Query: 890  AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EK 948
              ++ NSA+ L++ YC + PSD+++   PE + E  E   G T  +  ++LP  AP  + 
Sbjct: 541  PKITSNSAIQLVNLYCGKFPSDKFTDNLPEVVEEVKE---GMT--TVGIRLPIMAPLKDM 595

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQ--QEKVDQNDEGEPLP- 1005
            + G   ++  LA+++  L  C KLHEMG     L P + + +   +  VD   E EP+P 
Sbjct: 596  IYGSGWANKDLAKKSAALQLCIKLHEMGELDSNLRPKESNDDSLVEGLVDLPPE-EPVPE 654

Query: 1006 -----GTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV----NNGISK 1056
                 GT + R  + + +      E    G   C  S     F  + + V    +  ISK
Sbjct: 655  GTSESGTRKRRRVHAKDLCYPFSNE---HGGSYCLYSIDIKPFGQSGESVTIDSSTCISK 711

Query: 1057 DPFLTQ----VSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLF 1112
              F+ +     S F + FS   D                                     
Sbjct: 712  IGFICKEGLVSSPFPLFFSKWGDV------------------------------------ 735

Query: 1113 VPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGK 1172
              +V+ + V P+ +LD  L +KI K         R   +  +  NE  +  D  +  +  
Sbjct: 736  --MVNVREVGPLTDLDTSLFDKIKK-------FHRLVFENIIELNENLMSFDPEKSKWDV 786

Query: 1173 LRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCANA 1232
                + F +       +   I  FD +K          ++ HN +    +    D+    
Sbjct: 787  FIVPLDFSEII--DLNMLNEIYSFDSIKPV-------MIKSHNQNTKFVRSKFEDALIYP 837

Query: 1233 GDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELI 1292
                        S + +YV  I  E+   ++FP  EG  G   Y SY  Y+ ++YG+EL 
Sbjct: 838  Q-------YGIPSNQMYYVSHIFDELNPCNTFP--EGLKG---YESYERYFLERYGLELK 885

Query: 1293 FKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLP---PELCFIHPLPG 1349
             K QPL+  + +    N L    + + E++G             +P   PE C + P+  
Sbjct: 886  DKNQPLLEAKHIPKELNYLKKIPKKAREKKGN-----------LVPRFVPEFCGLIPIKA 934

Query: 1350 SLVRGAQRLPSIMRRVESMLLAIQ--LKDKINYPVPASKILE------------------ 1389
            SL      +PSI  R+ S  L  +  +K KI  P   +++L+                  
Sbjct: 935  SLWWQIMCMPSIFHRLNSFNLMHEFIVKTKITSPAIKNEVLDFSWTKKFIYELLGSSENT 994

Query: 1390 ----------------------ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
                                   L  AS  + F  ER ELLGD++LK+V    LFL+   
Sbjct: 995  VPRFLDRKKQEYIHPFSMLHAFTLKEASEDKEFNLERLELLGDSFLKFVTGEALFLRDES 1054

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPG--VLPVFDEDTKD 1484
             HEG+L++ R + V N  L++ A  KGL+  I A    P +  + PG  + P F+E  + 
Sbjct: 1055 YHEGRLSQSRGKRVCNKTLFRLACQKGLEGKIAAKVLNPKKNGSIPGFRIKPEFEESLRS 1114

Query: 1485 GD--SSLFDQEKSVAEDKLGTDKN--YNEYEDDDMEDGELEGDSSSYRV-----LSSKTL 1535
             +     + Q  +  +D +G  K   +    DD  +D + E   S Y       +S K++
Sbjct: 1115 LEVPHDFWHQVPNTVKD-VGDLKEAVFALMSDDASKDEKAEKKGSCYNPWTEHEVSDKSI 1173

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS-------RPACVPESVL- 1587
            AD VEA+IG Y    G +AA   + W+G+ V  D   +  P        R  C  +  + 
Sbjct: 1174 ADCVEAIIGAYLRVCGNEAAAAFLHWLGVGVFRDNSLLMEPKTVRTARVRKECAQDLTIF 1233

Query: 1588 -RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
             +      LE  +   F+DR  +V+A+TH+S  ++ V+ CYQRLEF+GDAVLD+L+T H+
Sbjct: 1234 YKKAVLDRLEKKIGYTFRDRSFIVQAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHI 1293

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            F  +T+  PG+L+DLR+  V N+   R A K KLH HL H +  L+  I  F+  + ++ 
Sbjct: 1294 FCRFTDYSPGQLSDLRSYFVKNDTLGRAAAKGKLHQHLLHINPKLEASIDKFLSILHQDP 1353

Query: 1706 LKPGFNSF-GLGDC---KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP- 1760
            L    N+   + DC   + PK LGD+VE+I GA++LDS R   V WQV + +L+ ++   
Sbjct: 1354 LGEELNTEDDVQDCEDVEIPKALGDMVEAIIGAVYLDSNRSLKVAWQVIERILEDLLNTS 1413

Query: 1761 -ETLPMHPVRELQERCQQQAEGLEYKASRSGN-LATVEVYIDGVQVGVAQNPQKKMAQKL 1818
             +T+ ++P+R+L E    + +    K    G+  +T  V + G     A     ++A+K 
Sbjct: 1414 IQTIQLNPIRQLLEEVPGEKQVEFVKGEDDGSEKSTYVVKVKGFGTFTASGKNYRVAKKK 1473

Query: 1819 AARNALAVLKEKETA 1833
             A  AL  +  ++ A
Sbjct: 1474 VAAIALKEIHNQQAA 1488


>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
          Length = 1632

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 426/1443 (29%), Positives = 664/1443 (46%), Gaps = 241/1443 (16%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQLD+ ++A ++N I +L TG GKT IAVLLI  + + +++ ++               +
Sbjct: 82   YQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSR---------------E 126

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQ---REFDTKQVLVMTAQILLNILRHSIIK 423
            QA VI   T + V  Y G  G++  D Q W+   REF+                      
Sbjct: 127  QAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFE---------------------- 163

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
                                      EFY++ S EK P VFGMTASP+  KG S++++  
Sbjct: 164  --------------------------EFYNSNSVEKFPRVFGMTASPIIGKGGSNKLNYT 197

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA-VEE 542
              I +LE  L + VC++ D +ELE  V  P   V  Y         H  L  + +  ++ 
Sbjct: 198  KCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPVN-----HSNLTTICIKELDS 251

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
                S R  +      +D+  K  L+ ++ + E        N+I       + L ELG +
Sbjct: 252  LKLQSERMLRASLCDFKDSQKK--LKSLWRLHE--------NII-------FCLQELGSF 294

Query: 603  CAYKVAQSFLTALQNDERANYQLDVK-----FQESYLSKVVSLLQCELVEGAVSKKDAKV 657
             A + A++FL+    D+    ++D+      F   YL+   S+L     +G+        
Sbjct: 295  GALQAARTFLS-FDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRNKTDGS-------- 345

Query: 658  VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
                      G+ ++E+ E                      +   + K   LI +L +Y 
Sbjct: 346  --------HAGSFDLEKLE----------------------EPFFSNKFSVLINVLSRYG 375

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQETIAKF 776
              E+ + I+FV+R+  A  +  +   L  L F K   L+G H+ S+ M   +M   + +F
Sbjct: 376  LQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRF 435

Query: 777  RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
              G V LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR   S Y++++ER N
Sbjct: 436  SSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLEREN 495

Query: 837  LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNS 896
             SH   L      E  + +E   RT              D +   +YQV++TGA +S   
Sbjct: 496  QSHEKLLNGYIAGESIMNEEIDSRTSNDMF---------DCLEENIYQVDNTGASISTAC 546

Query: 897  AVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSS 956
            +V L+H YC  LP D +    P F         G     C+L LP NA F + +G  C S
Sbjct: 547  SVSLLHCYCDNLPRDMFFTPSPVFFY-----IDGIEGIICRLILPPNAAFRQADGQPCLS 601

Query: 957  MRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPE 1016
               A++  CL AC KLH++GA TD LLP  GS + +  V  N     +   +   E +  
Sbjct: 602  KDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEM 661

Query: 1017 GVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDA 1076
             +  +L+         G     L +L  Y VK +   I +D    +   F +   + L  
Sbjct: 662  LIPAVLKP-------SGLKLDSLSNLHFYYVKFI--PIPED---RRYQMFGLFVINPLPV 709

Query: 1077 ELASLK-NFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            E  +L+ + H+    IV           ++  KA       S  S+   ++     ++ +
Sbjct: 710  EAETLQVDLHLARGRIVKAGIKHLGKIAFEKEKA------SSCSSMMLAHKFQEMCLKIL 763

Query: 1136 TKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQ 1195
                 +T+P  +   DV L  N            F  L   +   QK    YG R  I  
Sbjct: 764  LDRSEFTSPHVKLGNDVTLEINS----------TFYLL---LPIKQK---CYGDRFMIDW 807

Query: 1196 FDVVK--ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVES 1253
              V +  +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ 
Sbjct: 808  PAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDG 867

Query: 1254 IRYEMTAESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLL 1311
            I  E+ A S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL
Sbjct: 868  ILDEINAWS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLL 915

Query: 1312 SPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESML 1369
              R    E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L
Sbjct: 916  HNRL--PETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLL 971

Query: 1370 LAIQLKDKI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFL 1423
            +AI+LKD +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+
Sbjct: 972  VAIELKDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFI 1031

Query: 1424 KYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTK 1483
             Y    EGQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG  P       
Sbjct: 1032 TYEGLDEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG-RPC------ 1084

Query: 1484 DGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALI 1543
                      K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LI
Sbjct: 1085 ----------KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLI 1133

Query: 1544 GVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKF 1603
            G + VEGG  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KF
Sbjct: 1134 GAFLVEGGFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKF 1193

Query: 1604 KDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            K +GLL++A  H S       CYQ+ EF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ 
Sbjct: 1194 KHKGLLLQAFVHPSFSQHSGGCYQKTEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSL 1253

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFG 1714
            AV N++ A  AV+  +H HL   S+ L   I  F          K++LEE   P    F 
Sbjct: 1254 AVGNDSLAYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEEPACPKRLEF- 1312

Query: 1715 LGD 1717
            LGD
Sbjct: 1313 LGD 1315



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 39/321 (12%)

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
            +C +RLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ A  AV+  +H HL
Sbjct: 1305 ACPKRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHL 1364

Query: 1684 RHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGA 1734
               S+ L   I  F          K++LEE   P            PK LGDIVES  GA
Sbjct: 1365 IKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CPKALGDIVESCIGA 1411

Query: 1735 IFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLAT 1794
            + LDSG + + VW+ +          E L +   RE  E      + ++ +A  S  + +
Sbjct: 1412 VLLDSGFNLNYVWKNYGYKHRNKSLEEILIVARKRE-SELIGYNEDPIDVEADISVKMKS 1470

Query: 1795 VEVYIDGVQVGVAQNP---QKKMAQKLAA----------RNALAVLKEKETAEAKEKGDE 1841
              ++ + +     +       K   ++ A          RN    L  +      E  ++
Sbjct: 1471 PHIHEENIPFQNTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPKLATQSGRLPSEATEK 1530

Query: 1842 NGKKRKNG--TQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGW 1899
            + KK  +G       R  L ++C    W  P ++  +E GP+H ++FTY V V       
Sbjct: 1531 SNKKVYHGDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASA 1590

Query: 1900 T-DECVGEPMPSVKKAKDSAA 1919
            T  EC  +     K A++ AA
Sbjct: 1591 TLLECHSDGKLQKKAAQEHAA 1611



 Score = 47.8 bits (112), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            +E  C +R E LGDA L++V++ +L+  YP    GQ+T +R   V N  L   A+ K + 
Sbjct: 1302 EEPACPKRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIH 1361

Query: 1457 SYIQAD 1462
             ++  D
Sbjct: 1362 KHLIKD 1367


>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
 gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
          Length = 524

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/586 (43%), Positives = 349/586 (59%), Gaps = 64/586 (10%)

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYE 1403
            IH   G + +G ++LP +  RVE M+ AIQL+  INY +PASKILEALTAA+C E +CYE
Sbjct: 1    IHNFSGLVSKGTEKLPHLRNRVERMMQAIQLRKAINYNIPASKILEALTAANCHEPYCYE 60

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R ELLGDAYLKW VS  L+LK+    EG+LT  R +++SN  L+  AL KGL++Y++ + 
Sbjct: 61   RIELLGDAYLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINP 120

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F P R                                          E  D+++      
Sbjct: 121  FVPGR------------------------------------------EPTDLQE------ 132

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
                  LSSK LA+VVEALIG YYV  G   A H+++W+GI+      E+      + V 
Sbjct: 133  ------LSSKVLANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARAGSVVS 186

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLIT 1642
              VL S+DF  LE+ L   F+ R LL +A+TH+S R +S V  Y+RLEF+GDAVLDHL+T
Sbjct: 187  PEVLNSIDFEGLENTLGYSFRSRNLLAQALTHSSSRQASMVPIYERLEFIGDAVLDHLLT 246

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVL 1702
            +H++FSY +L PGRLTDLR AA+N+E+FAR  VKHKLH H+ H S+    QI+ + K  L
Sbjct: 247  RHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFHSQIKTYAKHAL 306

Query: 1703 EELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET 1762
              + +    S+G G  KAPKVLGD+ +S+ GA+++DSG +   VW+VF+PLL P+VTPE 
Sbjct: 307  N-MEENAIYSYGFGAVKAPKVLGDVFQSLVGAVYIDSGLNLDQVWKVFEPLLQPLVTPEA 365

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
            +P+HPVREL E C +  + LE+  S SG+L      +    +G   N QKKMA+KLAA N
Sbjct: 366  VPIHPVRELYELCDKHLKKLEWDYSLSGDLFLARALVGNKVLGRGTNVQKKMAKKLAAIN 425

Query: 1823 ALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAH 1882
            A+A L        K        + +  +  F+RQ L+++C +R WP P Y    E GPAH
Sbjct: 426  AIAKLD-------KSASPLTPSQEEKASGEFSRQALHELCSQRGWPCPDYNTHSETGPAH 478

Query: 1883 AKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            AK FT    V   ++G   EC+G+P P++ KAKDSAA +L+E L K
Sbjct: 479  AKMFTCTASVR-IEQGEKQECIGQPRPTINKAKDSAARVLMETLQK 523


>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
 gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
          Length = 524

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 255/586 (43%), Positives = 347/586 (59%), Gaps = 64/586 (10%)

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYE 1403
            IH     + +G ++LP +  RVE M+ AIQL+  INY +PASKILEALTAA+C E +CYE
Sbjct: 1    IHNFSELVSKGTEKLPHLRNRVERMMQAIQLRKAINYNIPASKILEALTAANCHEPYCYE 60

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R ELLGDAYLKW VS  L+LK+    EG+LT  R +++SN  L+  AL KGL++Y++ + 
Sbjct: 61   RIELLGDAYLKWAVSTRLYLKFSDFPEGELTITRGKIISNSALHYLALEKGLETYVRINP 120

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F P R                                          E  D+++      
Sbjct: 121  FVPGR------------------------------------------EPTDLQE------ 132

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
                  LSSK LA+VVEALIG YYV  G   A H+++W+GI+      E+      + V 
Sbjct: 133  ------LSSKVLANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARAGSVVS 186

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLIT 1642
              VL S+DF  LE+ L   F  R LL +A+TH+S R +S V  Y+RLEF+GDAVLDHL+T
Sbjct: 187  PEVLNSIDFEGLENTLGYSFGSRNLLAQALTHSSSRQASMVPIYERLEFIGDAVLDHLLT 246

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVL 1702
            +H++FSY +L PGRLTDLR AA+N+E+FAR  VKHKLH H+ H S+    QI+ + K  L
Sbjct: 247  RHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFHSQIKTYAKHAL 306

Query: 1703 EELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET 1762
              + +    S+G G  KAPKVLGD+ +S+ GA+++DSG +   VW+VF+PLL P+VTPE 
Sbjct: 307  N-MEENAIYSYGFGAVKAPKVLGDVFQSLVGALYIDSGLNLDQVWKVFEPLLQPLVTPEA 365

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
            +P+HPVREL E C +  + LE+  S SG+L      +    +G   N QKKMA+KLAA N
Sbjct: 366  VPIHPVRELYELCDKHMKKLEWDYSLSGDLFLARALVGNKVLGRGTNVQKKMAKKLAAIN 425

Query: 1823 ALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAH 1882
            A+A L        K        + +  +  F+RQ L+++C +R WP P Y    E GPAH
Sbjct: 426  AIAKLD-------KSASPLTPSQEEKTSGEFSRQALHELCSQRGWPCPDYNTHSETGPAH 478

Query: 1883 AKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            AK FT    V   ++G   EC+G+P P++ KAKDSAA +L+E L K
Sbjct: 479  AKMFTCTASVR-IEQGEKQECIGQPRPTINKAKDSAARMLMETLQK 523


>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 265/800 (33%), Positives = 416/800 (52%), Gaps = 90/800 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ++V E A+++NTIA L+TG+GKTLIAV+L++ +   ++    K L +FL P V LV
Sbjct: 67   RRYQIEVYEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTSGVKKLIIFLAPTVHLV 126

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQ + I+  T + V  Y G  G D W  + W++E     VLVMT QILL+ LR + ++M
Sbjct: 127  NQQFKNIKFLTDFQVEEYYGAKGVDTWTLKTWEKEISNNDVLVMTPQILLDALRKAFLRM 186

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
            E I L+++DECH  +  HPY+ +M EFYH  ++  +P +FGMTASPV  KGVSS +DC  
Sbjct: 187  EMICLIVIDECHRTIGNHPYTKIMKEFYHQANE--KPKIFGMTASPVGKKGVSSTMDCED 244

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA-SLWSLHEQLKQMEVAVEEA 543
            +I  LES LDS   T++DR E+++ VP   E    YD+A  S  SL  +++ +    +  
Sbjct: 245  QISELESILDSQRYTVEDRTEMDRCVPSAKESCRYYDQARFSALSLKPKIEALSFKFD-- 302

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
                        +    +  K+   +   +S+R  ++        L  I + L +LG  C
Sbjct: 303  ----------ALLSENQSNYKDVENKFKTLSQRMSNE--------LAKILHCLEDLGILC 344

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQC-ELVEGAVSKKDAKVVDSEN 662
            AY+  +      +N  ++  + ++ +++ YL  +  L +  +L+E ++   D K+++   
Sbjct: 345  AYEAVK---ICHENFSKSEGECEI-YRKGYLQCITFLEEVIKLIEESLHLADKKILE--- 397

Query: 663  GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDF 722
                                      VD     A   G ++PK+  LIK+   +  +   
Sbjct: 398  --------------------------VDFNYSQAEDLGYISPKLIELIKLFQSFGESSQV 431

Query: 723  RAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRV 781
              +IFV+R++ A V+ +    +P++S    + L G+N S +    + Q E +  FR G+V
Sbjct: 432  LCLIFVDRIITAKVIQRFAKTVPNISHFTVSYLTGNNTSVDALAPKRQKEILDSFRSGKV 491

Query: 782  TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT 841
             LL  T V EEG+ +  C+ VIRFDL KTV +Y+QSRGR+R+  S +++M+ERGNL    
Sbjct: 492  NLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMLERGNLKQRD 551

Query: 842  FLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLI 901
             L +   SE ++   +I +   S L+      +        Y VESTGA  +L+S+V LI
Sbjct: 552  QLFDIIRSERSMTDASIYKEHESSLR------ACMVGKTNAYYVESTGASFTLDSSVSLI 605

Query: 902  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQ 961
            H YC  LP D+YS ++P F  E     GG   Y CKL LP N+ F+ + GP    MRLA+
Sbjct: 606  HRYCGTLPRDKYSCVKPNF--EFLSVEGG---YQCKLILPSNSAFQTIIGPSGKDMRLAK 660

Query: 962  QAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADI 1021
               C  ACKKLH+MGA  + L+P      + + + +N E     GT + +E + +     
Sbjct: 661  HLACFEACKKLHQMGALNEHLVPLIEDSSEDDHIVKNKESSSGAGTTKRKELHGKANIHA 720

Query: 1022 LQGEWILSGRDGCTGSKL----FHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAE 1077
            L G W         G KL    F+ + +   C  N +S+       S FA+L  SELD +
Sbjct: 721  LSGAW---------GDKLTRVKFNAYKFEFTC--NIVSE-----IYSGFALLIESELDED 764

Query: 1078 LASLKNFHVRLMSIVLDVDV 1097
            + ++ N  + L+S ++   V
Sbjct: 765  VGNV-NLDLYLVSKIVKASV 783



 Score =  356 bits (914), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 261/778 (33%), Positives = 386/778 (49%), Gaps = 102/778 (13%)

Query: 1221 GKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYA 1280
             K+  A+   +A +++ R+V A H+GK + +  I   ++AES F          E  +++
Sbjct: 909  NKIHFANCVVDADNIKDRVVLAIHTGKIYCIIEIDSNLSAESPFYGNNE--KSKESITFS 966

Query: 1281 DYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGE--GEEILDKTYYVFLP 1338
            DY+ + YG+ L    QP++R +      NLL   F   EE +    G        +V +P
Sbjct: 967  DYFSKSYGISLRHPGQPMLRLKQSHNPHNLL---FNFYEEDKSSKIGPAASKLPVHVHIP 1023

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN-----YPVPASKILEALTA 1393
            PEL +I  +   +++    LPS+M R+ES++L+ QL+++I+     + + +S ILE+LT 
Sbjct: 1024 PELLYILDVKRDVLKSLYLLPSLMYRIESLMLSSQLREEIDGQTSKFNIRSSLILESLTT 1083

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
              C E+F  ER ELLGD+ LK+VVS  LFLKYP+KHEGQL+  R   V N  L++    +
Sbjct: 1084 LRCSESFSMERLELLGDSVLKYVVSCHLFLKYPKKHEGQLSARRSSAVCNSTLHKLGTDR 1143

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
             LQ YI+   F P RW APG   +       G  +L          ++  D  ++  ED 
Sbjct: 1144 KLQGYIRDSAFEPRRWVAPGQRSIHLVCCDCGLETL----------EVPLDAKFHT-EDP 1192

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD---- 1569
             +  G+       +  + SKT+AD VEALIG YYV+GG  A+ ++MKW+GI  E +    
Sbjct: 1193 KVVVGKFCDRGHCW--MCSKTIADCVEALIGAYYVDGGLFASLNVMKWLGIGAELELSLV 1250

Query: 1570 PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV-SCYQR 1628
             E +   S   C+P    +  +  +LE  +  +F  +GLL+EAITH S    G+  CY+R
Sbjct: 1251 DEAITAASLRTCLP----KESEIASLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYER 1306

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD+VLD LIT HL+ S+T++ PG LTDLR+A+VNN+NFA+VAV+H LH HL H S 
Sbjct: 1307 LEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHSSG 1366

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
             L  QI ++VK + E       +   L    APK LGD+VESI GAI +D+      VW 
Sbjct: 1367 LLLSQISEYVKVISES------DPRSLPSISAPKALGDVVESIVGAILIDTKLSLDQVWN 1420

Query: 1749 VFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYK--ASRSGNLATVEVYI---DGVQ 1803
            VF  LL P+VTP+ L + P REL E C      ++ K    + G+   VEV +   + + 
Sbjct: 1421 VFYSLLSPIVTPDKLELPPFRELNELCDSLGYFVKVKENCEKVGSAMHVEVSVQLPNALL 1480

Query: 1804 VGVAQNPQKKMAQKLAARNALAVLKEKETAEAK--EKGDENGKKRKNGTQTFT------- 1854
            V   +   KK A+  AA   L  L+++  +      KG  +      G+           
Sbjct: 1481 VREGKGANKKTAKGEAAFYLLKDLEKQGISHGSFMSKGKRDNPDHVYGSSHLKMDSSILI 1540

Query: 1855 ----------------------------------RQTLNDICLRRNWPMPLY-------- 1872
                                              R TL ++C +  WP+P +        
Sbjct: 1541 EEHSSEPASHKRHILDETNLTAINLSINMKKGGPRTTLYEVCKKLQWPVPTFDSTEYKDR 1600

Query: 1873 ----RCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAV-LLLEL 1925
                 C    G      F   + +   + G   E  GE     K + DSAAV +LLEL
Sbjct: 1601 SLFESCEGLQGSKGQNCFVSKITLCIPNYG-NIESKGEARSDKKTSFDSAAVQMLLEL 1657


>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
 gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
          Length = 1660

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 274/784 (34%), Positives = 406/784 (51%), Gaps = 83/784 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ+ V E A K+NTIA LETGAGKT+IAV+LIR I   ++  + K L +FL P V LV
Sbjct: 63   RSYQVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLV 122

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQ EVI++ T + VG Y G  G D W  + W++E +   VLVMT QILL+ LR + + +
Sbjct: 123  NQQYEVIKDNTNFKVGEYYGAKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFLNL 182

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
            E ++L+I+DECH     HP + +M EFYH  S   +P +FGMTASPV  KGVSS VDC  
Sbjct: 183  EMVSLMIIDECHRTTGNHPCTKIMKEFYHKLS--NKPKIFGMTASPVVQKGVSSAVDCED 240

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE-EA 543
            +I  LE+ LDS + TI+DR E++ HVP   E+   YD A        QL   ++  + EA
Sbjct: 241  QISELETILDSQIYTIEDRTEMDVHVPSAREICKFYDIA--------QLYSSDIKSKIEA 292

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
            + S    S     G+  +  K+   +   + +R  +D +       + +N  L ELG  C
Sbjct: 293  SWSKFDASLLSLQGSIQSSYKDADDRYKTLQQRLYNDYS-------KILN-CLEELGLIC 344

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESY-LSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
            AY+  +  L    +    +   ++  +  Y L +V+S++   L  G              
Sbjct: 345  AYEAVKICLENSPSTAAFDIYREISLKCKYFLEEVLSIIGTYLPHG-------------- 390

Query: 663  GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDF 722
                            DS+++  G   D +   AV    ++PK+  L+++ L +   ++ 
Sbjct: 391  ----------------DSYLLDLG--FDYL--KAVRLSYISPKLYELLQVFLSFGVDKEV 430

Query: 723  RAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRV 781
              +IFV+R++ A V+ +   ++ +L     + + G N S +  T + Q ET+  FR G+V
Sbjct: 431  LCLIFVDRIITAKVIERFVKKVAALVHFTVSYVTGSNTSVDALTPKTQRETMYAFRSGKV 490

Query: 782  TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT 841
             LL +T V  EG+ +  C+ VI FDL KTV  Y QSRGRAR+  S YI+M++RGN+    
Sbjct: 491  NLLFSTDVLREGIHVPNCSCVICFDLPKTVCCYAQSRGRARQNDSQYIIMLQRGNVKQRD 550

Query: 842  FLRNARNSEETLRKEAIER-TDLSHLKDTSRLISVDAVP--GTVYQVESTGAVVSLNSAV 898
             L +   SE  +   AI R  D+  LK          VP     Y V+ TGA V+ +S+V
Sbjct: 551  QLFDFIRSEWLVTNTAINRDPDVWTLK--------TCVPEETEAYIVDVTGASVTADSSV 602

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
             LI  YCS+LPSDRY   RP F  E  E+      + CK+ LP +A F+ + GPVC S +
Sbjct: 603  TLIQRYCSKLPSDRYFTPRPTFEFECFEQ-----SFQCKMMLPASAAFQTIVGPVCRSQQ 657

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGV 1018
            LA+Q  CL ACK+LH+MGA  D LLP      + +   +        GT + +E +    
Sbjct: 658  LAKQLACLEACKQLHQMGALDDHLLPSVEEPTEDDHTVRRKGSLAGAGTTKRKELHGTTP 717

Query: 1019 ADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAEL 1078
               L G W     DG T    FH + +   C    I  + +    S + +L  S+LD ++
Sbjct: 718  IHALSGSWG-ENLDGAT----FHAYKFEFSC---SIVSEKY----SGYILLIESKLDDDV 765

Query: 1079 ASLK 1082
             +++
Sbjct: 766  GNIE 769



 Score =  356 bits (913), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 251/753 (33%), Positives = 379/753 (50%), Gaps = 86/753 (11%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPL 1298
            +V A H+GK + V  +  + +AES F +  G   P ++S++++Y+ +KYG+ L+  +QPL
Sbjct: 921  VVLAIHTGKIYSVVEVVGDASAESPFEQNVGG-APSKFSTFSEYFNKKYGIVLLRPRQPL 979

Query: 1299 IRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRL 1358
            +  +      NLL+P     E+   +G  +  +  +  +PPEL     +P   ++ +  L
Sbjct: 980  LLLKQSHKPHNLLNPP---DEDTLKDGLVVAKQRQFARMPPELLVSIDVPIQTLKSSYLL 1036

Query: 1359 PSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAELLGDAYL 1413
            PS+M R+ES++LA QL+ +I     N+ +P+  ILEA+T     E    ER ELLGD+ L
Sbjct: 1037 PSLMYRLESLMLASQLRQEIACQVSNFHIPSLLILEAITTPRSCEKVSMERLELLGDSVL 1096

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K+ VS  LFL+YP KHEGQL+  R + V N  L+Q  +   LQ YI+   F P  W APG
Sbjct: 1097 KYSVSCDLFLRYPTKHEGQLSAQRTRAVCNSTLHQLGIGCKLQGYIRDSAFIPRYWVAPG 1156

Query: 1474 VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSK 1533
              P F      G  +L      V  D         +++ +D +       S  +R + SK
Sbjct: 1157 QQPAFYVSCTCGVDTL-----EVPLDA--------KFQTEDPKVQIAICCSKGHRWMCSK 1203

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFH 1593
            T++D VEA+IG YYV GG  AA H+M+W+G+ VE DP  V    + A V     +  +  
Sbjct: 1204 TISDCVEAVIGAYYVSGGLMAALHVMQWLGMDVEFDPSLVDKIIKTASVRSYTPKEDEIK 1263

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
             +E  L   F  + LL EA+THAS    G+  CYQRLEF+GD+VLD LIT HL+ ++T++
Sbjct: 1264 GIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFLGDSVLDLLITWHLYQNHTSM 1323

Query: 1653 PPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS 1712
             PG LTDLR+A V+NENFA+V V+  L+ HL+H S+ L  QI    KE LE   +    +
Sbjct: 1324 DPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLSQI----KEYLESFHESDEVA 1379

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
               G  K PK LGD++ESIAGA+ +D+  +   VW++F PLL P+ TP+ L + P+REL 
Sbjct: 1380 KATGP-KGPKALGDLLESIAGAMLIDAKLNLDEVWRIFMPLLSPLATPQNLELPPLRELM 1438

Query: 1773 ERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            + C      ++ K   + ++   E+ +   D + VG   +  +K A+  AA + L  L+ 
Sbjct: 1439 QLCNSLGYFIKEKCINNNDIVHAELRLQLNDVLLVGNGCDRSRKAAKGKAATHLLKKLEN 1498

Query: 1830 KETAEA-----KEKGDEN---------------------------GKKRKNGTQTFT--- 1854
            +    +     + K D N                                 G  +F    
Sbjct: 1499 RGITYSWGHSKRRKQDSNHVVDSSPLDITNDKAKDHKKPKKLENQSPAGSGGDPSFAGII 1558

Query: 1855 ----------RQTLNDICLRRNWPMPLYRCVR---------EGGPAHAKRFTYAVRVNTT 1895
                      R  L ++C +  W  P Y             + G      F   + +N  
Sbjct: 1559 EAINMKKGGPRTDLFELCKKVQWTTPTYSSTENKSSTPILFDEGIERYNSFVSTITLNIP 1618

Query: 1896 DKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
              G T EC G+P P  K + D+AA+ +L  L K
Sbjct: 1619 FYG-TIECTGDPRPDKKSSCDTAALAMLYELQK 1650


>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 262/780 (33%), Positives = 396/780 (50%), Gaps = 74/780 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ  V E AK++NTIA L+TG GKT+IA++LIR I   ++   +K+  +FL P V LV
Sbjct: 47   RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQ +VI++ TG+ V  Y G  G D W A+ W++E     VLVMT QILL+ LR + + +
Sbjct: 107  NQQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 166

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
            E + L+I+DECH A   HPY+ +M EFYH +    +P +FGMTASPV  KGVSS +DC  
Sbjct: 167  ETVCLMIVDECHRATGNHPYTKIMKEFYHKSVD--KPKIFGMTASPVIRKGVSSSMDCEN 224

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE-EA 543
            +I  LES LD  + TI+DR ELE  +P   E+   YD +        Q   +++  + ++
Sbjct: 225  QISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDAS--------QFHNLDLKAKLKS 276

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
            + S          G+     K+   ++  + +R  +D A         I Y L +LG  C
Sbjct: 277  SWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAK--------ILYCLDDLGLIC 328

Query: 604  AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
            AY+  +     ++N   A  + +   Q S   K        ++ G +   D   ++SE+ 
Sbjct: 329  AYEAVK---VCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESD 385

Query: 664  FVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFR 723
             ++                             AV  G +TPK+  L+++   +       
Sbjct: 386  ILK-----------------------------AVDKGYITPKLHELLQLFQSFGVARKVL 416

Query: 724  AIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVT 782
             +IFVER++ A V+ +   ++  LS    + L G N+S +    + Q ET+  FR G+V 
Sbjct: 417  CLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRSGKVN 476

Query: 783  LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATF 842
            LL AT V EEG+ +  C+ VIRFDL KTV +Y+QSRGRAR+  S +I+M+ERGN      
Sbjct: 477  LLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTEQRDQ 536

Query: 843  LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIH 902
            L +   SE ++   A  R    +      +  +D+     Y V+STGA V+ +S+V LIH
Sbjct: 537  LFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDS-----YFVDSTGASVTADSSVSLIH 591

Query: 903  FYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQ 962
             YC +LP D+Y   +P F     E       Y CKL LP NA F+ + GP   +  L++Q
Sbjct: 592  RYCEKLPGDKYFTPKPFFHFTYLEG-----MYECKLTLPPNAAFQTIIGPGNKNSHLSKQ 646

Query: 963  AVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADIL 1022
             VCL ACKKLH+MGA  D LLP      + + + ++       GT + +E +       L
Sbjct: 647  LVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTCAL 706

Query: 1023 QGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELASLK 1082
             G W     D   G+ +F  +     C    I  + +    S F +L  S+LD ++ +++
Sbjct: 707  SGTW----GDKIDGA-IFQAYKIDFSC---NIVNELY----SGFVLLIESKLDDDVGNIE 754



 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 260/770 (33%), Positives = 399/770 (51%), Gaps = 94/770 (12%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK 1284
            +A++  +  +L+  +V A H+G+ + +  +  + +AES F      +    Y+++A+Y+ 
Sbjct: 899  LANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSAD-VNSSNYTTFAEYFN 957

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI 1344
             KYG+ L++  QPL+  +      NLL    +    Q G+         +V +PPEL   
Sbjct: 958  NKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEDALQTGQKMLNEKAQTHVHMPPELLVS 1017

Query: 1345 HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP----VPASKILEALTAASCQETF 1400
              +P ++++ +  LPS++ R+ES++LA QL+++I +     + +S ILEA+T   C E+F
Sbjct: 1018 IEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTGSQISSSLILEAITTLRCSESF 1077

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
              ER ELLGD+ LK+ VS  LFLKYP+KHEGQL+  R  +V N  L++    + LQ YI+
Sbjct: 1078 SMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIR 1137

Query: 1461 ADRFAPSRWAAPG---VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
               F P RW APG   + PV      D      D +    + K+   K+ +         
Sbjct: 1138 DGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDR-------- 1189

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS 1577
                     +R + SKT+AD VEALIG YYV GG +AA HLMKW GI VE +P  V    
Sbjct: 1190 --------GHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAI 1241

Query: 1578 RPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAV 1636
              A +   + ++ +   LE  +  +F  +GLL+EAITHA+    GV  CYQRLEF+GD+V
Sbjct: 1242 ATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSV 1301

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            LD LIT HL+ S+ ++ PG LTDLR+A+VNNE+FA+VAV+  L  HL+H S  L  QI++
Sbjct: 1302 LDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKE 1361

Query: 1697 FVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            + K +   +++  P      L   K PK LGD+VESIAGAI +D+  + + VW++F+PLL
Sbjct: 1362 YAKYLSGSDDVPNP------LQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLL 1415

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV---YIDGVQVGVAQNPQ 1811
             P+VTP+ L + P+REL E C      ++ K +  G L   E+    ID + VG      
Sbjct: 1416 SPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRN 1475

Query: 1812 KKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTF------------------ 1853
            KK A+  AA   L  L+++  + ++     N K+RK G                      
Sbjct: 1476 KKAAKGQAAAQLLKNLEKRGISYSR----SNSKRRKQGADLVGVSSSLNMGGDACGQSNN 1531

Query: 1854 -----------------------TRQTLNDICLRRNWPMPLYRCVREG-------GPAHA 1883
                                    R +L ++C R  WPMP +    +        G    
Sbjct: 1532 EDSSENYDFVFAVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSE 1591

Query: 1884 KR-----FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            +R     F  ++ ++  + G   EC G+     K + DSAA+++L  L +
Sbjct: 1592 RREGFNSFISSISLHIPNCG-VMECRGDHRADKKSSLDSAALVMLHELQR 1640


>gi|296089026|emb|CBI38729.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/205 (90%), Positives = 198/205 (96%)

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKA 1786
            I ESIAGAIFLDSGRDT+VVW+VFQPLL PMVTPETLPMHPVRELQERCQQQAEGLEYKA
Sbjct: 23   ICESIAGAIFLDSGRDTAVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKA 82

Query: 1787 SRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKR 1846
            +RSGNLATVEV+IDGVQ+G+AQNPQKKMAQKLAARNAL VLKE+ETAEAKE  DENGKK+
Sbjct: 83   TRSGNLATVEVFIDGVQIGIAQNPQKKMAQKLAARNALVVLKERETAEAKEGDDENGKKK 142

Query: 1847 KNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGE 1906
            KNG+QTFTRQTLNDICLRRNWPMP+YRCV EGGPAHAKRFT+AVRVNT DKGWTDEC+GE
Sbjct: 143  KNGSQTFTRQTLNDICLRRNWPMPVYRCVNEGGPAHAKRFTFAVRVNTNDKGWTDECIGE 202

Query: 1907 PMPSVKKAKDSAAVLLLELLNKWYS 1931
            PMPSVKKAKDSAAVLLLELLNKWY+
Sbjct: 203  PMPSVKKAKDSAAVLLLELLNKWYT 227


>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 261/788 (33%), Positives = 396/788 (50%), Gaps = 82/788 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ  V E AK++NTIA L+TG GKT+IA++LIR I   ++   +K+  +FL P V LV
Sbjct: 47   RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLV 106

Query: 365  --------YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
                    + Q +VI++ TG+ V  Y G  G D W A+ W++E     VLVMT QILL+ 
Sbjct: 107  NQACFFFIFSQFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDA 166

Query: 417  LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
            LR + + +E + L+I+DECH A   HPY+ +M EFYH +    +P +FGMTASPV  KGV
Sbjct: 167  LRKAFLSLETVCLMIVDECHRATGNHPYTKIMKEFYHKSVD--KPKIFGMTASPVIRKGV 224

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
            SS +DC  +I  LES LD  + TI+DR ELE  +P   E+   YD +        Q   +
Sbjct: 225  SSSMDCENQISELESILDCQIYTIEDRTELEVFIPSAKEINRFYDAS--------QFHNL 276

Query: 537  EVAVE-EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
            ++  + +++ S          G+     K+   ++  + +R  +D A         I Y 
Sbjct: 277  DLKAKLKSSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAK--------ILYC 328

Query: 596  LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
            L +LG  CAY+  +     ++N   A  + +   Q S   K        ++ G +   D 
Sbjct: 329  LDDLGLICAYEAVK---VCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDG 385

Query: 656  KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
              ++SE+  ++                             AV  G +TPK+  L+++   
Sbjct: 386  NYLNSESDILK-----------------------------AVDKGYITPKLHELLQLFQS 416

Query: 716  YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIA 774
            +        +IFVER++ A V+ +   ++  LS    + L G N+S +    + Q ET+ 
Sbjct: 417  FGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLE 476

Query: 775  KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIER 834
             FR G+V LL AT V EEG+ +  C+ VIRFDL KTV +Y+QSRGRAR+  S +I+M+ER
Sbjct: 477  SFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLER 536

Query: 835  GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSL 894
            GN      L +   SE ++   A  R    +      +  +D+     Y V+STGA V+ 
Sbjct: 537  GNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDS-----YFVDSTGASVTA 591

Query: 895  NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVC 954
            +S+V LIH YC +LP D+Y   +P F     E       Y CKL LP NA F+ + GP  
Sbjct: 592  DSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEG-----MYECKLTLPPNAAFQTIIGPGN 646

Query: 955  SSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFY 1014
             +  L++Q VCL ACKKLH+MGA  D LLP      + + + ++       GT + +E +
Sbjct: 647  KNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELH 706

Query: 1015 PEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSEL 1074
                   L G W     D   G+ +F  +     C    I  + +    S F +L  S+L
Sbjct: 707  GTTQTCALSGTW----GDKIDGA-IFQAYKIDFSC---NIVNELY----SGFVLLIESKL 754

Query: 1075 DAELASLK 1082
            D ++ +++
Sbjct: 755  DDDVGNIE 762



 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 239/640 (37%), Positives = 365/640 (57%), Gaps = 42/640 (6%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK 1284
            +A++  +  +L+  +V A H+G+ + +  +  + +AES F      +    Y+++A+Y+ 
Sbjct: 907  LANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSAD-VNSSNYTTFAEYFN 965

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKT--YYVFLPPELC 1342
             KYG+ L++  QPL+  +      NLL    +   E    G+++L++    +V +PPEL 
Sbjct: 966  NKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELL 1025

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP----VPASKILEALTAASCQE 1398
                +P ++++ +  LPS++ R+ES++LA QL+++I +     + +S ILEA+T   C E
Sbjct: 1026 VSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTGSQISSSLILEAITTLRCSE 1085

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
            +F  ER ELLGD+ LK+ VS  LFLKYP+KHEGQL+  R  +V N  L++    + LQ Y
Sbjct: 1086 SFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGY 1145

Query: 1459 IQADRFAPSRWAAPG---VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            I+   F P RW APG   + PV      D      D +    + K+   K+ +       
Sbjct: 1146 IRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDR------ 1199

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGC 1575
                       +R + SKT+AD VEALIG YYV GG +AA HLMKW GI VE +P  V  
Sbjct: 1200 ----------GHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDE 1249

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGD 1634
                A +   + ++ +   LE  +  +F  +GLL+EAITHA+    GV  CYQRLEF+GD
Sbjct: 1250 AIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGD 1309

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            +VLD LIT HL+ S+ ++ PG LTDLR+A+VNNE+FA+VAV+  L  HL+H S  L  QI
Sbjct: 1310 SVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQI 1369

Query: 1695 RDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            +++ K +   +++  P      L   K PK LGD+VESIAGAI +D+  + + VW++F+P
Sbjct: 1370 KEYAKYLSGSDDVPNP------LQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKP 1423

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV---YIDGVQVGVAQN 1809
            LL P+VTP+ L + P+REL E C      ++ K +  G L   E+    ID + VG    
Sbjct: 1424 LLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCG 1483

Query: 1810 PQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNG 1849
              KK A+  AA   L  L+++  + ++     N K+RK G
Sbjct: 1484 RNKKAAKGQAAAQLLKNLEKRGISYSR----SNSKRRKQG 1519


>gi|147844517|emb|CAN79991.1| hypothetical protein VITISV_002668 [Vitis vinifera]
          Length = 435

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 237/429 (55%), Positives = 298/429 (69%), Gaps = 36/429 (8%)

Query: 1   MEGETRVSDIVGGGESNQSSYWLDACEDILID-EFVNFDTSVVQDSVDNTSNQDSLSNDF 59
           MEGE     ++  G S   +YWLDACEDI  D +F  F++++V +S D  SN D +  DF
Sbjct: 1   MEGE-----MMNKGVSGSEAYWLDACEDIPCDLDFPEFESNIVSESADAPSNPDGVG-DF 54

Query: 60  FGGIDHILDSIKNGSGL-----------PNSNGNLLKNGSED-STGGEN---HQAEGLIL 104
           FGGID ILDSIKNG+GL           P+   +     +E+ + G  N   H + G+  
Sbjct: 55  FGGIDRILDSIKNGTGLTPVVDEGTTGIPDCAVSQTWFQTENVAVGASNLQLHHSFGVSD 114

Query: 105 LSNNGSDKDGVDRKRKLENC---ENVNGYL-VNGKAGGRLSDHFTKENGVHRDNGNNDHE 160
           +S N  D +G  R+   + C   E  NG + ++GKA  +L  H  K NGV + + N  ++
Sbjct: 115 VSPN--DTNGTKRRSDDDGCQFHEADNGKMSLDGKAESKLV-HSPKGNGVKK-HENRPND 170

Query: 161 ASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRD 220
           ASR RDFD ++R+SKRAR+   KN+  YS+RGQY    ++R   RKR R+ ++  RRD D
Sbjct: 171 ASRDRDFDDQERYSKRARLGDSKNDRHYSTRGQY--QPRERSSCRKRSRNWEEFDRRDGD 228

Query: 221 PMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANG 280
            +RR+EHY   SR++ RD+++RDRE +GYWERDRLGS  M+F LGSWEA+ NR GK    
Sbjct: 229 QIRRKEHY--GSRRESRDREWRDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAE 286

Query: 281 INQECNGKVGKK--SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLI 338
            NQECNG V ++   E KEK+PEEQAR YQLDVLEQAKK+NTIAFLETGAGKTLIAVLLI
Sbjct: 287 KNQECNGSVTERRLEEPKEKLPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLI 346

Query: 339 RSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQR 398
           RS+ NDLQ QNKK+LAVFLVPKVPLVYQQAEVIRE+TGY VGHYCGEMGQDFWDA+RWQR
Sbjct: 347 RSVFNDLQGQNKKLLAVFLVPKVPLVYQQAEVIRERTGYQVGHYCGEMGQDFWDARRWQR 406

Query: 399 EFDTKQVLV 407
           EF+TK V +
Sbjct: 407 EFETKHVTL 415


>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
 gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  392 bits (1006), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 280/798 (35%), Positives = 423/798 (53%), Gaps = 107/798 (13%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQL+ LEQA K+NTI FLETG+GKTLIA +L+RS  + L R+  + +AVFLVP
Sbjct: 18   PLPFARSYQLEALEQALKQNTIVFLETGSGKTLIATMLLRSYAH-LLRKPSRFIAVFLVP 76

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQA V+R  T   VG Y G+MG DF  A  W++E D  +VLVMT QILLN LR 
Sbjct: 77   EVFLVRQQAGVVRMHTDLNVGMYWGDMGIDFSHAATWKQEIDKHEVLVMTHQILLNGLRQ 136

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTASPVNLKGV 476
               K++ I +LI DECHHA   HPY+ +M+EF+H    +     P +FGMTAS +  KG 
Sbjct: 137  GYFKLDFIKVLIFDECHHARGNHPYACIMTEFFHRELRSGHHDLPRIFGMTASLIKSKGA 196

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
            +S+     +IC LE+ ++S V T      L + +P P+   + Y+       ++  L++ 
Sbjct: 197  NSESYYRQQICELENIMNSKVYTCASETVLAEFIPSPAAEFLFYEPMKIPDGIYACLEEE 256

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                               +G   A  +  L+Q+  +SE       + + +   A+ +  
Sbjct: 257  -------------------LGNLKAKHELLLKQL-DLSESAAESVHSKISKVHSALMFCS 296

Query: 597  GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--- 653
            GELG W A++ A+ FL+    D                S  ++  + ++    + KK   
Sbjct: 297  GELGVWLAFQAAR-FLSHSDTD----------------SDFIAWGKVDVSGETIVKKFCW 339

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
            DA +V S N F               S     G++ +  +GA    G +T KV  LIK L
Sbjct: 340  DASLVIS-NCF---------------SAECCIGDNTEADVGA----GLITAKVLCLIKTL 379

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFVKSASLIGHNNSQEMRTFQMQ-E 771
            L+Y+  +D R I+FVERV+ A+VL  +  EL P  S  K+  + G+N+  + +T QMQ E
Sbjct: 380  LQYRDLKDIRCIVFVERVITAVVLESLLRELLPKHSSWKTKYIAGNNSGLQSQTRQMQNE 439

Query: 772  TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
             + +FR G V ++VATS+ EEGLD++ CN+VIRFD   +V ++IQSRGRAR   SDY+LM
Sbjct: 440  IVEEFRKGMVNIIVATSILEEGLDVQSCNLVIRFDPPSSVSSFIQSRGRARMQNSDYLLM 499

Query: 832  IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAV 891
            ++  + +  + L N  +S E +R+E++ R+  S     S L   +      Y VE TGAV
Sbjct: 500  VKTEDSTTHSRLENYLSSSEIMRRESLRRSSTSCSAPQSELYEDE-----FYSVEGTGAV 554

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG 951
            V+L+S+V LI+FYCS+LPSD Y    P  I+++ ++       +C L LP ++P + +  
Sbjct: 555  VTLSSSVSLIYFYCSRLPSDGYFKPAPICIIDKEKE-------TCTLHLPKSSPIQNI-- 605

Query: 952  PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE---QQEKVDQNDEGEPLPGTA 1008
             V  + +  +Q  CL ACK+LH +GA TD L+PD    E   Q+ + ++ D+ +P+    
Sbjct: 606  CVQGNNKNLKQKACLEACKQLHLIGALTDNLVPDVVEEEAVAQEIRNERYDDEQPI---- 661

Query: 1009 RHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAV 1068
                + P  +A   QG   L  +  C   +L   F Y V               V D  +
Sbjct: 662  ----YLPPELAS--QGPRNLKTKYYCYLIELNQKFDYGVP--------------VHDIVL 701

Query: 1069 LFSSELDAELASLKNFHV 1086
            +  +EL++++ S   F +
Sbjct: 702  VMRTELESDVLSSMGFEL 719



 Score =  325 bits (832), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 222/620 (35%), Positives = 324/620 (52%), Gaps = 74/620 (11%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  +V   H+G  +++     ++   S    + G    + Y  +  + K++  ++L+F 
Sbjct: 837  LQNSLVCTPHNGNVYFITGASEDLNGRSLLKLRNG--SAITYKEH--FAKRRNSIQLLFD 892

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
            ++PL+ GR +    N L+ R    +E+E        K  +V LPPELC   + P+  S +
Sbjct: 893  QEPLLEGRHIFPVHNFLN-RCRTKKEKES-------KNAHVDLPPELCDIILSPVSISTL 944

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDK------INYPVPASKILEALTAASCQETFCYERAE 1406
                 +PSIM R+ES+L+A+ LK         N  +PA K+LEA+T   CQE F  E  E
Sbjct: 945  YSYTFIPSIMHRLESLLIAVNLKKMHSDHCMQNVDIPAMKVLEAITTKKCQEKFHLESLE 1004

Query: 1407 LLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
             LGD++LK+  S+ LF  Y   HEG L+  +++++SN  L +      L  +I+ + F P
Sbjct: 1005 TLGDSFLKYAASQQLFKLYQNHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDP 1064

Query: 1467 SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS 1526
              W  PG                         DK G+D   +E    +     + G    
Sbjct: 1065 KLWMIPG-------------------------DKCGSDL-LSEEPLSECRKIYVRGR--- 1095

Query: 1527 YRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD--PEEVGCPSRPACVPE 1584
             R + SKT+ADVVEALIG Y   GG+  A   M WIGI+V+    P E     +      
Sbjct: 1096 -RKVKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAE---- 1150

Query: 1585 SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITK 1643
               + V+   LE  L   F+D  LLVEA+TH S     + SCYQRLEF+GDAVLD+LIT 
Sbjct: 1151 ---KFVNVRYLESLLNYSFRDPSLLVEALTHGSYMLPEIPSCYQRLEFLGDAVLDYLITM 1207

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
            HL+  Y  + PG LTDLR+A+VNN+ +A+ AVK  LH H+ H S  L + I     E  E
Sbjct: 1208 HLYKEYPGMSPGLLTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLHKHI----VETAE 1263

Query: 1704 ELLKPGFNS-FGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPE 1761
               K    S FG   +   PKVLGD++ES+AGAI +DSG +  +V+Q  +PLL+P++TP 
Sbjct: 1264 IFQKSSLGSTFGWESETSFPKVLGDVIESLAGAILVDSGYNKEIVFQSIRPLLEPLITPA 1323

Query: 1762 TLPMHPVRELQERCQQQAEGLEYK---ASRSGNLATVEVYI--DGVQVG-VAQNPQKKMA 1815
            T+ +HP REL E CQ+Q    +YK    S +G  A++ + +  +GV     A    KK A
Sbjct: 1324 TVRLHPARELSELCQKQ--HFDYKKSVVSYNGRNASITIVVGANGVTFKHTATAADKKTA 1381

Query: 1816 QKLAARNALAVLKEKETAEA 1835
            +KLA++  L  LKE   A +
Sbjct: 1382 KKLASKEVLKSLKESNFASS 1401


>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 263/702 (37%), Positives = 380/702 (54%), Gaps = 80/702 (11%)

Query: 293 SEAKEKMPEEQ--ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK 350
           SE ++  P+    AR YQL+ LE A K+NTI +LETG+GKTLIA++L+RS    L R+  
Sbjct: 9   SENQQLCPDSLPFARSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYAY-LLRKPS 67

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTA 410
             +AVFLVP V LV QQ + +   T   VG Y GEMG D+WDA  WQ++    +VLVMT 
Sbjct: 68  PYIAVFLVPTVVLVAQQGDALIMHTDLKVGKYWGEMGVDYWDAATWQKQVVDHEVLVMTP 127

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMT 467
            ILL  LRHS +K+E I +LI DECH+A  KHPY+ +M EFYH   T    + P +FGMT
Sbjct: 128 AILLAALRHSFLKIEMIKVLIFDECHNARGKHPYACIMKEFYHRQLTLESAQLPRIFGMT 187

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLW 527
           ASP+  KG S +    + I +LE+ + S V T      L K++P  +  +  Y       
Sbjct: 188 ASPIKTKGSSVEFTWKM-IRDLENLMHSKVYTCVSEFCLAKYIPFSTPKLKIYRHVDIPC 246

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
           +L   L    + +++  + S  +S    + A    A + L ++Y                
Sbjct: 247 TLFVSLVSDLIRLKDKYEDSISKSSLSDLSA--GSAXKRLSKLYS--------------- 289

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
              +  + L ELG W A+K A+ FL++ + D  +  +LDV  Q                 
Sbjct: 290 ---SFIFCLSELGVWLAFKAAE-FLSSEETDFFSWGELDVCAQ----------------- 328

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
                   ++V     F  G +          SH   GG+     I A V  G +T KV 
Sbjct: 329 --------RIV---RNFSLGASKVFSAHXPSGSHWSLGGD-----IHANVDAGYLTSKVN 372

Query: 708 SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFVKSASLIGHNNSQEMRT 766
           SLI+ LL+Y+  +D R IIFVER++ A+VL  +  EL P LS  K+    GH++  + ++
Sbjct: 373 SLIESLLEYRDLKDLRCIIFVERIITAIVLRSLXNELLPDLSGWKTEYTAGHSSLLQSQS 432

Query: 767 FQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             +Q  I + FR G V ++VATS+ EEGLD++ CN+VIRFD + TV ++IQSRGRAR   
Sbjct: 433 RNVQNKIVEEFRKGVVNIIVATSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQN 492

Query: 826 SDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDL--SHLKDTSRLISVDAVPGTVY 883
           S +ILM+  G+ S  T ++N   S E +R+E++    +  S L D       +      Y
Sbjct: 493 SHFILMVGSGDASTLTRMQNYMQSGEIMRQESLRHASIPCSPLDD-------ELHDEPYY 545

Query: 884 QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
           +VE+TGAVV+L+S+V L++FYCS+LPSD Y    P   +E+  +       +C L LP N
Sbjct: 546 KVETTGAVVTLSSSVSLLYFYCSRLPSDGYYKPSPRCAIEKETE-------TCTLYLPKN 598

Query: 944 APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
            P +K+   V  + ++ +Q  CL ACK+LH  GA TD L+PD
Sbjct: 599 CPLQKVIS-VKGNTKILKQLACLEACKELHREGALTDNLVPD 639



 Score =  290 bits (741), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 211/616 (34%), Positives = 314/616 (50%), Gaps = 78/616 (12%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            LE  +V   H+G  + +      +   S   ++ G     E  +Y +YYK+++ + L F 
Sbjct: 840  LENSLVCTPHNGYVYCITGFLDNLDCNSLLEQRTG-----ESITYIEYYKKRHRINLCFD 894

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKT-YYVFLPPELCFI--HPLPGSL 1351
             + L+RG+ +    N L         Q    ++  D T   V LPPELC I   P+  S 
Sbjct: 895  GEQLLRGKHIFKVHNYL---------QRCRSQKAKDSTESSVELPPELCSIIMSPVSIST 945

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-------EALTAASCQETFCYER 1404
            +     LPS+M RVES+++A  LK   +Y       L       + L   +  ++F +  
Sbjct: 946  LFTYSYLPSVMHRVESLIMASNLKRMHSYQCTQKHFLFQPLRFWKQLQQRNASKSFIWNH 1005

Query: 1405 AE----LLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
                  L  +    +  SR + +     HEG LT  + +++SN  L +   ++ +  +I+
Sbjct: 1006 LRHLETLFSNMLRVYSCSRLMKIH----HEGLLTVKKNKIISNAALCKLGCARKIPGFIR 1061

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            ++ F    W  PG                              D +  +  D+++    +
Sbjct: 1062 SEPFDLKGWLIPG------------------------------DNSQVQNFDEELLMPSV 1091

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
            +  S   + + SK +ADVVEALIG +   GG+ AA   MKW+G+    D + V  P+ P 
Sbjct: 1092 KMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGV----DIDFVDAPT-PR 1146

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              P +  + V+   LE  L  KF D  LLVEA+TH S     +  CYQRLEF+GDAVLD+
Sbjct: 1147 HFPMNAEKLVNVRYLESLLDYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDY 1206

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
             +T HL+F Y  L PG +TDLR+A+VNNE +A+ AVK  LH H+ H S  L RQI   V 
Sbjct: 1207 AVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILHASQDLQRQI---VN 1263

Query: 1700 EVLE-ELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
             VL  E L P  ++FG   +   PKVLGD++ES+AGAIF+DSG +  VV+Q  + LL+P+
Sbjct: 1264 TVLNFEKLDPA-STFGWESETTFPKVLGDVIESLAGAIFVDSGFNKDVVFQSVRTLLEPL 1322

Query: 1758 VTPETLPMHPVRELQERCQQQAEGLEYK-ASRSGNLA--TVEVYIDGVQVGVAQNPQ-KK 1813
            +TP+T+ +HPVREL E C Q+    +    SR   +A  TVEV  DGV      + + KK
Sbjct: 1323 ITPDTVKLHPVRELSELCDQKGYIKKKNVVSRENGVAYITVEVEADGVSHKFTCSERDKK 1382

Query: 1814 MAQKLAARNALAVLKE 1829
            MA+K+A +N L +LKE
Sbjct: 1383 MAEKVACKNVLKLLKE 1398


>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
 gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
          Length = 1651

 Score =  389 bits (998), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 243/702 (34%), Positives = 377/702 (53%), Gaps = 63/702 (8%)

Query: 291 KKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK 350
           +K E ++  P    R YQLDV E A ++NTIA L+TGAGKT+IAV+LI+      +  N 
Sbjct: 23  QKRECQDFTP----RRYQLDVYEVAMRQNTIAMLDTGAGKTMIAVMLIKHFGKISKANND 78

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTA 410
           + L +FL P V LV QQ EVI+  T + V HY G  G D W A  WQ++F   QV+VMT 
Sbjct: 79  RKLIIFLAPTVQLVTQQCEVIKSYTDFEVEHYHGAKGVDQWKAHSWQQQFLKYQVMVMTP 138

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
           Q+LL+ LR + + ++ ++L+I DECHHA   HPY+ +M EFYH +  E +P+VFGMTASP
Sbjct: 139 QVLLDALRQAFLILDMVSLMIFDECHHATGNHPYTRIMKEFYHGS--EHKPNVFGMTASP 196

Query: 471 VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAASLWSL 529
           +  KGVSS +DC  ++  LE+ LDS +  + DR+E+E  VP   EV   Y+ +  S   L
Sbjct: 197 IIRKGVSSDLDCENQLSELENILDSKIHAVVDREEIELCVPSAKEVNRYYEPRTVSFEDL 256

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
            E+L+ +    +        RS  Q+  A D   KE  R+               L + L
Sbjct: 257 SEELEILCSKYDGLIVQLHNRSTNQYKDA-DEITKESRRR---------------LSKSL 300

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQES-----YLSKVVSLLQCE 644
             I Y L + G  CA +  +  +   Q         D   Q+S      L   +S+L  +
Sbjct: 301 AKICYCLEDAGLLCASEATKICIERGQRKGWLKGGSDTTDQQSDPNGPILFAEISMLHMK 360

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
             +  +   D ++    +  +   +  +E  ++                      G ++P
Sbjct: 361 FFQEVLDIIDKRLQQGIDALLNSESGCVEAAKM----------------------GYISP 398

Query: 705 KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM 764
           K+  L+++ L +  +++ R +IFV+R ++A V+ +   ++  LS  + + L G ++S + 
Sbjct: 399 KLYELMRVFLSFSDSDNVRCLIFVDRKISARVIERTMKKIGRLSCFRVSFLTGGSSSVDA 458

Query: 765 RTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            T +MQ +T+  FR G+V LL  T VAEEG+ I  C+ VIRFDL +T  +Y+QSRGRAR+
Sbjct: 459 LTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHIPDCSCVIRFDLPRTTRSYVQSRGRARQ 518

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSR-LISVDAVPGTV 882
             S YILMIE+GN+  +  +     S+ ++ + A  R      +D+ R    ++ +    
Sbjct: 519 RDSQYILMIEKGNVKQSDLISRIMRSKTSMTEIASNREP----EDSHRNFFPIEEI--NE 572

Query: 883 YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
           Y + +TGA ++ +S++ +++ YC +LP D+Y   RP F    H   G    Y C + LP 
Sbjct: 573 YHISTTGAKITTDSSISVLNQYCDKLPKDKYYTPRPTFQFT-HYGDG----YECTVTLPS 627

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +A F+ L GP   +M+ A+Q VCL ACK+LH++GA  D L P
Sbjct: 628 SAMFQLLVGPKARNMQKAKQLVCLDACKRLHQLGALDDHLSP 669



 Score =  362 bits (928), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 230/589 (39%), Positives = 327/589 (55%), Gaps = 44/589 (7%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFP----RKEGYLGPLEYSS 1278
            + +A+    A DL+  +V A H+GK + V  +  ++ A S F     +KE      ++ +
Sbjct: 883  IRLANKSCKADDLKNMVVLAIHTGKIYTVLKVS-DLCANSKFDGTSDKKEA-----KFQT 936

Query: 1279 YADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEG-----EGEEILDKT- 1332
            +A+Y+++KY + L    QPL+  +      NLLS +       EG      G  + +K  
Sbjct: 937  FAEYFEKKYNIFLCHPLQPLLVLKPTHNPHNLLSSK----NRDEGIILFFVGNVVENKNR 992

Query: 1333 --YYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP---VPASKI 1387
                V +PPEL     LP  ++R     PS+M R+ES++LA QL+ +I Y    + +  I
Sbjct: 993  ANSLVHMPPELLIPLDLPVDVLRVFYLFPSLMHRLESLMLASQLRSEIAYTDSDISSFVI 1052

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            LEA+T   C E F  ER ELLGD+ LK+ VS  LF+ +  KHEGQL+  RQ+ + N  LY
Sbjct: 1053 LEAITTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLY 1112

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            +    + +Q YI+   F P RW APG L      ++        + + + ED        
Sbjct: 1113 RLGTERRIQGYIRDAAFDPRRWLAPGQL-----SSRPCPCECPVKSEVITED-------I 1160

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
            +  +D  +  G+       +R + SKT++D VEA+IG YYVEGG  AA  ++KW+  Q+E
Sbjct: 1161 HRIDDKSIIIGK--ACDKGHRWICSKTISDCVEAIIGAYYVEGGLKAAFAVLKWL--QIE 1216

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPSSGVS-C 1625
            +  EE    +  +    + L  VD    LE  L   F+ +GLL+EA+TH S+  SG + C
Sbjct: 1217 TLEEEQIMEALSSASVRNYLPKVDVVEFLEAKLGYTFQVKGLLIEALTHPSQQESGATYC 1276

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GDAVLD LIT+HLF S+ +   G LTDLR+A+VNNENFA+VAVKH LH  L+H
Sbjct: 1277 YQRLEFLGDAVLDILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQH 1336

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
             S  L  QI ++V   LE       +    G  + PKVLGDIVESIAGAI +DS  D  +
Sbjct: 1337 SSGFLQDQITEYVNS-LEGSSMDRTSLLSSGPSRGPKVLGDIVESIAGAILIDSKLDLDL 1395

Query: 1746 VWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLAT 1794
            VW+VF+PLL P+VTPE L + P REL E C +    +  K    G+  T
Sbjct: 1396 VWRVFKPLLSPIVTPENLELPPFRELNEWCDKNGYFIGIKCENRGDKTT 1444


>gi|15229816|ref|NP_189978.1| protein dicer-like 3 [Arabidopsis thaliana]
 gi|7594553|emb|CAB88120.1| putative protein [Arabidopsis thaliana]
 gi|94450858|gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana]
 gi|332644321|gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana]
          Length = 1531

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 266/760 (35%), Positives = 393/760 (51%), Gaps = 83/760 (10%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            T  +  A++ ++   LE  +V A H+G+ + +     + +A S F   +   G   Y++Y
Sbjct: 786  TNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPF-EVDASSG---YATY 841

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEH----SEEQEGEGEEILDKTYYV 1335
            A+Y+ +KYG+ L    QPL++ +   +  NLL    E     +E + G   +      + 
Sbjct: 842  AEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRK-RKPNIHA 900

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEA 1390
             LPPEL     +P ++++    LPS+M R+ES++LA QL+++I     N+ + ++ ILEA
Sbjct: 901  HLPPELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEA 960

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +T  +C E+F  ER ELLGD+ LK+V S  LFLKYP K EGQL+R RQ ++SN  L++  
Sbjct: 961  VTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLT 1020

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             S+ LQ YI+   F P RW APG   +F    K G     D  +   + K  T       
Sbjct: 1021 TSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCG----IDTREVPLDPKFFT------- 1069

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            E+  ++ G  +     +R + SK+++D  EALIG YYV GG  A+ H+MKW+GI V+ DP
Sbjct: 1070 ENMTIKIG--KSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFDP 1127

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLE 1630
              V        +   + +  +   LE  ++ +F  + LL EAITH+S   S    Y+RLE
Sbjct: 1128 NLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSSLRES--YSYERLE 1185

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GD+VLD LIT+HLF +Y    PG +TDLR+A VNNENFA+VAVK+ LH HL+  ++ L
Sbjct: 1186 FLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVL 1245

Query: 1691 DRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            + QI D+    L    KP      +   + PK LGD+VESIAGA+ +D+  D   VW+VF
Sbjct: 1246 ETQINDY----LMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVF 1301

Query: 1751 QPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG--NLATVEVYIDGVQV-GVA 1807
            +PLL P+VTP+ L + P REL E C         K S  G    AT+++ +D V + G  
Sbjct: 1302 EPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDG 1361

Query: 1808 QNPQKKMAQKLAARNALAVLKEKETAEAKEKGDE----------NGKKRKNGTQTFT--- 1854
                 K+A   AA + L  L+++  +     GD           N   R+  T   T   
Sbjct: 1362 SEQTNKLALGKAASHLLTQLEKRNISRKTSLGDNQSSMDVNLACNHSDRETLTSETTEIQ 1421

Query: 1855 -----------------RQTLNDICLRRNWPMPLYRCVRE----------GGPAHAKRFT 1887
                             R TL++ C +  WPMP +    E          GG    KR +
Sbjct: 1422 SIVIPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGG---EKRTS 1478

Query: 1888 YAVRVNT-TDKGWTDECV---GEPMPSVKKAKDSAAVLLL 1923
            ++   +T T +    E V   GE  P  K + DSA V LL
Sbjct: 1479 FSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELL 1518



 Score =  152 bits (384), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 224/532 (42%), Gaps = 103/532 (19%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
           Y+L V E AK +N IA L TG  K+ I   LI+++ +       K L +FL P V L   
Sbjct: 47  YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGSS---DTDKRLIIFLAPTVNL--- 100

Query: 367 QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
           Q   IR      V  Y G  G D W +QRW  EF    VLVMT QILL++LR + +K+E 
Sbjct: 101 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 160

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
           + LLI+D                E +HTT       +                    +KI
Sbjct: 161 VCLLIID----------------ECHHTTGNHPYAKL--------------------MKI 184

Query: 487 CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASL-WSLHEQLKQMEVAVEEAAQ 545
            N E           +R+ +EK      E  + Y+ + S    L E+L+   +  + + +
Sbjct: 185 FNPE-----------EREGVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLR 233

Query: 546 SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
                 K  F+   +     + R                L    R I + L  LG  CA+
Sbjct: 234 RLQELGKDSFLNMDNKFETYQKR----------------LSIDYREILHCLDNLGLICAH 277

Query: 606 KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
             A+  L  + + +          +ES   K  S++  E +E  +S     +   +   V
Sbjct: 278 LAAEVCLEKISDTK----------EESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLV 327

Query: 666 EGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAI 725
           +   N +                      +AV  G V+PK++ L  +L  ++  +  + +
Sbjct: 328 DLQQNHL----------------------SAVISGHVSPKLKELFHLLDSFRGDKQKQCL 365

Query: 726 IFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAK-FRDGRVTLL 784
           I VER++ A V+ +   +  SL+++    L  +N S  +   +MQ  I   F+ G+V LL
Sbjct: 366 ILVERIITAKVIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLL 425

Query: 785 VATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
             T V EEG  +  C+ ++ FDL KT+ +Y QS+  A++  S  I+ +ERGN
Sbjct: 426 FITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGN 477


>gi|334185719|ref|NP_001154663.2| protein dicer-like 3 [Arabidopsis thaliana]
 gi|332644323|gb|AEE77844.1| protein dicer-like 3 [Arabidopsis thaliana]
          Length = 1570

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 266/760 (35%), Positives = 393/760 (51%), Gaps = 83/760 (10%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            T  +  A++ ++   LE  +V A H+G+ + +     + +A S F   +   G   Y++Y
Sbjct: 825  TNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPF-EVDASSG---YATY 880

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEH----SEEQEGEGEEILDKTYYV 1335
            A+Y+ +KYG+ L    QPL++ +   +  NLL    E     +E + G   +      + 
Sbjct: 881  AEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRK-RKPNIHA 939

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEA 1390
             LPPEL     +P ++++    LPS+M R+ES++LA QL+++I     N+ + ++ ILEA
Sbjct: 940  HLPPELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEA 999

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +T  +C E+F  ER ELLGD+ LK+V S  LFLKYP K EGQL+R RQ ++SN  L++  
Sbjct: 1000 VTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLT 1059

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             S+ LQ YI+   F P RW APG   +F    K G     D  +   + K  T       
Sbjct: 1060 TSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCG----IDTREVPLDPKFFT------- 1108

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            E+  ++ G  +     +R + SK+++D  EALIG YYV GG  A+ H+MKW+GI V+ DP
Sbjct: 1109 ENMTIKIG--KSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFDP 1166

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLE 1630
              V        +   + +  +   LE  ++ +F  + LL EAITH+S   S    Y+RLE
Sbjct: 1167 NLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSSLRES--YSYERLE 1224

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GD+VLD LIT+HLF +Y    PG +TDLR+A VNNENFA+VAVK+ LH HL+  ++ L
Sbjct: 1225 FLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVL 1284

Query: 1691 DRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            + QI D+    L    KP      +   + PK LGD+VESIAGA+ +D+  D   VW+VF
Sbjct: 1285 ETQINDY----LMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVF 1340

Query: 1751 QPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG--NLATVEVYIDGVQV-GVA 1807
            +PLL P+VTP+ L + P REL E C         K S  G    AT+++ +D V + G  
Sbjct: 1341 EPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDG 1400

Query: 1808 QNPQKKMAQKLAARNALAVLKEKETAEAKEKGDE----------NGKKRKNGTQTFT--- 1854
                 K+A   AA + L  L+++  +     GD           N   R+  T   T   
Sbjct: 1401 SEQTNKLALGKAASHLLTQLEKRNISRKTSLGDNQSSMDVNLACNHSDRETLTSETTEIQ 1460

Query: 1855 -----------------RQTLNDICLRRNWPMPLYRCVRE----------GGPAHAKRFT 1887
                             R TL++ C +  WPMP +    E          GG    KR +
Sbjct: 1461 SIVIPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGG---EKRTS 1517

Query: 1888 YAVRVNT-TDKGWTDECV---GEPMPSVKKAKDSAAVLLL 1923
            ++   +T T +    E V   GE  P  K + DSA V LL
Sbjct: 1518 FSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELL 1557



 Score =  220 bits (560), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 251/532 (47%), Gaps = 64/532 (12%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
           Y+L V E AK +N IA L TG  K+ I   LI+++ +       K L +FL P V LV Q
Sbjct: 47  YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGSS---DTDKRLIIFLAPTVNLVKQ 103

Query: 367 QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
           Q   IR      V  Y G  G D W +QRW  EF    VLVMT QILL++LR + +K+E 
Sbjct: 104 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
           + LLI+DECHH    HPY+ +M EFYH ++   +P +FG+TAS V  K          ++
Sbjct: 164 VCLLIIDECHHTTGNHPYAKLMKEFYHEST--SKPKIFGLTASAVIRKA---------QV 212

Query: 487 CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASL-WSLHEQLKQMEVAVEEAAQ 545
             LE  +DS +   ++R+ +EK      E  + Y+ + S    L E+L+   +  + + +
Sbjct: 213 SELERLMDSKIFNPEEREGVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASLR 272

Query: 546 SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
                 K  F+   +     + R                L    R I + L  LG  CA+
Sbjct: 273 RLQELGKDSFLNMDNKFETYQKR----------------LSIDYREILHCLDNLGLICAH 316

Query: 606 KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
             A+  L  + + +          +ES   K  S++  E +E  +S     +   +   V
Sbjct: 317 LAAEVCLEKISDTK----------EESETYKECSMVCKEFLEDILSTIGVYLPQDDKSLV 366

Query: 666 EGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAI 725
           +   N +                      +AV  G V+PK++ L  +L  ++  +  + +
Sbjct: 367 DLQQNHL----------------------SAVISGHVSPKLKELFHLLDSFRGDKQKQCL 404

Query: 726 IFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAK-FRDGRVTLL 784
           I VER++ A V+ +   +  SL+++    L  +N S  +   +MQ  I   F+ G+V LL
Sbjct: 405 ILVERIITAKVIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNLL 464

Query: 785 VATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
             T V EEG  +  C+ ++ FDL KT+ +Y QS+  A++  S  I+ +ERGN
Sbjct: 465 FITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGN 516


>gi|334185717|ref|NP_001154662.2| protein dicer-like 3 [Arabidopsis thaliana]
 gi|322518661|sp|Q9LXW7.2|DCL3_ARATH RecName: Full=Endoribonuclease Dicer homolog 3; AltName:
            Full=Dicer-like protein 3; Short=AtDCL3
 gi|332644322|gb|AEE77843.1| protein dicer-like 3 [Arabidopsis thaliana]
          Length = 1580

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 266/760 (35%), Positives = 393/760 (51%), Gaps = 83/760 (10%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            T  +  A++ ++   LE  +V A H+G+ + +     + +A S F   +   G   Y++Y
Sbjct: 835  TNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPF-EVDASSG---YATY 890

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEH----SEEQEGEGEEILDKTYYV 1335
            A+Y+ +KYG+ L    QPL++ +   +  NLL    E     +E + G   +      + 
Sbjct: 891  AEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEMVVKTEPKAGNVRK-RKPNIHA 949

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEA 1390
             LPPEL     +P ++++    LPS+M R+ES++LA QL+++I     N+ + ++ ILEA
Sbjct: 950  HLPPELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEA 1009

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +T  +C E+F  ER ELLGD+ LK+V S  LFLKYP K EGQL+R RQ ++SN  L++  
Sbjct: 1010 VTTLTCPESFSMERLELLGDSVLKYVASCHLFLKYPDKDEGQLSRQRQSIISNSNLHRLT 1069

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             S+ LQ YI+   F P RW APG   +F    K G     D  +   + K  T       
Sbjct: 1070 TSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCG----IDTREVPLDPKFFT------- 1118

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            E+  ++ G  +     +R + SK+++D  EALIG YYV GG  A+ H+MKW+GI V+ DP
Sbjct: 1119 ENMTIKIG--KSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFDP 1176

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLE 1630
              V        +   + +  +   LE  ++ +F  + LL EAITH+S   S    Y+RLE
Sbjct: 1177 NLVVEAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSSLRES--YSYERLE 1234

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GD+VLD LIT+HLF +Y    PG +TDLR+A VNNENFA+VAVK+ LH HL+  ++ L
Sbjct: 1235 FLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVL 1294

Query: 1691 DRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            + QI D+    L    KP      +   + PK LGD+VESIAGA+ +D+  D   VW+VF
Sbjct: 1295 ETQINDY----LMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVWRVF 1350

Query: 1751 QPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG--NLATVEVYIDGVQV-GVA 1807
            +PLL P+VTP+ L + P REL E C         K S  G    AT+++ +D V + G  
Sbjct: 1351 EPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDGVKAQATIQLQLDDVLLTGDG 1410

Query: 1808 QNPQKKMAQKLAARNALAVLKEKETAEAKEKGDE----------NGKKRKNGTQTFT--- 1854
                 K+A   AA + L  L+++  +     GD           N   R+  T   T   
Sbjct: 1411 SEQTNKLALGKAASHLLTQLEKRNISRKTSLGDNQSSMDVNLACNHSDRETLTSETTEIQ 1470

Query: 1855 -----------------RQTLNDICLRRNWPMPLYRCVRE----------GGPAHAKRFT 1887
                             R TL++ C +  WPMP +    E          GG    KR +
Sbjct: 1471 SIVIPFIGPINMKKGGPRGTLHEFCKKHLWPMPTFDTSEEKSRTPFEFIDGG---EKRTS 1527

Query: 1888 YAVRVNT-TDKGWTDECV---GEPMPSVKKAKDSAAVLLL 1923
            ++   +T T +    E V   GE  P  K + DSA V LL
Sbjct: 1528 FSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELL 1567



 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/533 (30%), Positives = 257/533 (48%), Gaps = 56/533 (10%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
           Y+L V E AK +N IA L TG  K+ I   LI+++ +       K L +FL P V LV Q
Sbjct: 47  YELKVYEVAKNRNIIAVLGTGIDKSEITKRLIKAMGSS---DTDKRLIIFLAPTVNLVKQ 103

Query: 367 QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
           Q   IR      V  Y G  G D W +QRW  EF    VLVMT QILL++LR + +K+E 
Sbjct: 104 QCCEIRALVNLKVEEYFGAKGVDKWTSQRWDEEFSKHDVLVMTPQILLDVLRSAFLKLEM 163

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG-VSSQVDCAIK 485
           + LLI+DECHH    HPY+ +M EFYH ++   +P +FG+TAS V  KG VSS  + A +
Sbjct: 164 VCLLIIDECHHTTGNHPYAKLMKEFYHEST--SKPKIFGLTASAVIRKGIVSSPSNYAAQ 221

Query: 486 ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASL-WSLHEQLKQMEVAVEEAA 544
           +  LE  +DS +   ++R+ +EK      E  + Y+ + S    L E+L+   +  + + 
Sbjct: 222 VSELERLMDSKIFNPEEREGVEKFATTVKEGPILYNPSPSCSLELKEKLETSHLKFDASL 281

Query: 545 QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
           +      K  F+   +     + R                L    R I + L  LG  CA
Sbjct: 282 RRLQELGKDSFLNMDNKFETYQKR----------------LSIDYREILHCLDNLGLICA 325

Query: 605 YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF 664
           +  A+  L  + + +          +ES   K  S++  E +E  +S     +   +   
Sbjct: 326 HLAAEVCLEKISDTK----------EESETYKECSMVCKEFLEDILSTIGVYLPQDDKSL 375

Query: 665 VEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRA 724
           V+   N +                      +AV  G V+PK++ L  +L  ++  +  + 
Sbjct: 376 VDLQQNHL----------------------SAVISGHVSPKLKELFHLLDSFRGDKQKQC 413

Query: 725 IIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAK-FRDGRVTL 783
           +I VER++ A V+ +   +  SL+++    L  +N S  +   +MQ  I   F+ G+V L
Sbjct: 414 LILVERIITAKVIERFVKKEASLAYLNVLYLTENNPSTNVSAQKMQIEIPDLFQHGKVNL 473

Query: 784 LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
           L  T V EEG  +  C+ ++ FDL KT+ +Y QS+  A++  S  I+ +ERGN
Sbjct: 474 LFITDVVEEGFQVPDCSCMVCFDLPKTMCSYSQSQKHAKQSNSKSIMFLERGN 526


>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 281/890 (31%), Positives = 424/890 (47%), Gaps = 146/890 (16%)

Query: 1104 WDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGG 1163
            W P++ YL +P+  D S D +  + W  +   T    + N       +  LGT +   GG
Sbjct: 827  WSPSRMYLLLPL-EDNSTDEL-RIHWPGITACTLAAEFLNK------NSLLGTEQSDDGG 878

Query: 1164 DRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKL 1223
                               S+P+    G+             P  +  +       T  +
Sbjct: 879  -------------------SNPSLNSTGS-------------PVTDCKE-------TNII 899

Query: 1224 MMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYY 1283
              A+S  +A  L   +V A H+G+ + +     + TAESSF      +   E++++ +Y+
Sbjct: 900  RFANSSVDANSLRNTVVLAIHTGRIYCIIEAVSDKTAESSFAETVDTVSS-EFANFYEYF 958

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKT--YYVFLPPEL 1341
             +KY + L    QPL+  +      NLL    +     +     ++++   ++V +PPEL
Sbjct: 959  YKKYNIVLKHPGQPLMLLKQSHNPHNLLVNFNDEGVSAKASQAGVVNEKPRFHVHMPPEL 1018

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY-----PVPASKILEALTAASC 1396
              +  +P S+++    LPS+M R+ES++LA QL+++IN+      +P+S ILEALT   C
Sbjct: 1019 LLVLDVPVSVLKSLYLLPSLMHRLESLMLANQLREEINFCSSNIDIPSSMILEALTTLRC 1078

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
             E+F  ER ELLGD+ LK+ VS  LFL+YP KHEGQL+  R   V N  L++      +Q
Sbjct: 1079 CESFSMERLELLGDSVLKYAVSCHLFLRYPNKHEGQLSARRSLAVCNSTLHKLGTDHKIQ 1138

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
             YI+   F P RW APG   +     K G  SL          ++  DK + + ED  ++
Sbjct: 1139 GYIRDSAFDPRRWVAPGQRVLRPVPCKCGVDSL----------EVPLDKKF-QTEDPKVK 1187

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
             G+       +R L SKT++D VEALIG YY+ GG  AA H+MKW+GI  E DP  V   
Sbjct: 1188 VGK--SCDRGHRWLCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGIDAELDPLVVA-- 1243

Query: 1577 SRPACVPESVLRSV----DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
                 + ++ LR+     + H +E  +   F  +  L EA+TH S   S   CYQRLEF+
Sbjct: 1244 ---EVINQASLRTYVPNYEIHMIESKVGYNFSVKFFLQEALTHESLHES--YCYQRLEFL 1298

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GD+VLD LIT++L+  +TN+ PG LTDLR+A+VNNENFA+VAV+H LH HL+H S+ L  
Sbjct: 1299 GDSVLDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSN 1358

Query: 1693 QIRDFVKEVLEE----LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            QI ++V+   E      L P          K PK LGD+VESI GAI +D+  +   VW+
Sbjct: 1359 QISEYVQSFTESDNTTRLDPSI--------KGPKALGDLVESIVGAILIDTNLNLDKVWR 1410

Query: 1749 VFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVE---VYIDGVQVG 1805
            + +PLL P+VTP+ L + P REL E C      ++ K    G +   E        + VG
Sbjct: 1411 IVEPLLSPIVTPDKLELPPFRELNELCDSLGYFIKEKCKNKGEVVHAELLLQLDHDLLVG 1470

Query: 1806 VAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGD------------------------- 1840
               +  +K+A+  AA   L  L+ +  +  K K D                         
Sbjct: 1471 EGFDRSRKVAKGKAASCLLKDLENRGISRKKRKHDCVDSSQTMEDDSLEPTIPKRQRRAE 1530

Query: 1841 ----ENGKKRKNGTQTF------------TRQTLNDICLRRNWPMPLYRCVREG------ 1878
                +  KK  + T                R TL ++C +  WPMP  +           
Sbjct: 1531 IQLLDESKKACSATPATPVIVTVKTKKGGPRTTLFELCKKLLWPMPSIKATEHKSSAPME 1590

Query: 1879 ---GPAHAKRF-TYAVRVNTTDKGW-TDECVGEPMPSVKKAKDSAAVLLL 1923
               GP   K F ++  ++     G+   EC G+     K + DSAA+ +L
Sbjct: 1591 IGEGPERKKGFISFVSKIILNVPGYDIIECTGDAKADKKSSSDSAALFML 1640



 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 250/757 (33%), Positives = 373/757 (49%), Gaps = 85/757 (11%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQL V E AK++N IA L+TG GKT+IAV+LI+     ++    K L +FL P V LV Q
Sbjct: 48   YQLQVYEVAKRRNIIALLDTGVGKTMIAVMLIKDFGQAIESTESKKLIIFLAPTVHLVNQ 107

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
               +IRE     V  Y G  G D W    W++E     VLVMT QILL+ LR + + ++ 
Sbjct: 108  VCFLIRESLNLEVEQYYGAKGVDEWTLDCWEKETKEHDVLVMTPQILLDALRKAFLSLDM 167

Query: 427  INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
            ++L+I+DECH A   HPY+ +M EFYH ++   +P +FGMTASPV  KGV S  +C  ++
Sbjct: 168  VSLMIIDECHRATGNHPYAKIMKEFYHKSNN--KPKIFGMTASPVVSKGVLSSNNCDGQM 225

Query: 487  CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQS 546
              LE  LDS++ TI+DR E+E  VP   E    +D A        Q   +++        
Sbjct: 226  SELECVLDSLIYTIEDRTEMEACVPSAKESCRFFDPA--------QFSSLDL-------- 269

Query: 547  SSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR----AINYALGELGQW 602
               ++K +    +  G+   L+     S +   D   NL ++L      + + L  LG  
Sbjct: 270  ---KAKVEASWLKTDGSLSNLQSSLQTSHKDMDDKLKNLRKRLSNDHAKVLHCLDNLGLI 326

Query: 603  CAYKVAQSFLTAL--QNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            CAY+     L  +    +E   Y+  V   +++L +V    QC + E         +   
Sbjct: 327  CAYEAVNICLENILDTTEESKAYRESVLQYKNFLEEV----QCRIGES--------LPLG 374

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
            +  F+  G + ++                      AV  G ++PK+  L+++   +  T 
Sbjct: 375  DKNFLNSGFDYLK----------------------AVDLGYISPKLHELLQLFQSFGETR 412

Query: 721  DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDG 779
                +IFVER++ A V+ +   ++  LS    + + G N S +    ++Q ET+  FR G
Sbjct: 413  QVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAPKIQKETLESFRSG 472

Query: 780  RVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSH 839
            +V LL  T V EEG+ +  C  VIRFDL KTV +Y+QSRGRAR+  S++I+M+ERGN+  
Sbjct: 473  KVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNSEFIMMLERGNVKQ 532

Query: 840  ATFLRNARNSEETLRKEAIER---TDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNS 896
               L +   SE ++   AI+R   +D   LKD +           V+ V++TGA V+ +S
Sbjct: 533  RNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHT------FEETNVFIVDATGASVTADS 586

Query: 897  AVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSS 956
            AV LIH YC +LP D+Y   +P F     E       Y CKL LP NA  + + GP   +
Sbjct: 587  AVSLIHKYCGKLPGDKYYTPKPNFQFTSSEG-----LYKCKLTLPVNAAVQTIVGPPSRN 641

Query: 957  MRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV----DQNDEGEPLPGTARHRE 1012
              LA+Q VCL ACK+LH+MGA  D L P      +   +    D         GT + +E
Sbjct: 642  SHLAKQLVCLEACKQLHQMGALDDHLTPSIEEPSENACISKGKDSGAGAGAGAGTTKRKE 701

Query: 1013 FYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKC 1049
             +       L G W     D      +F  + +  KC
Sbjct: 702  LHGTTCIQALCGSWGEKSDDA-----VFFAYKFDFKC 733


>gi|297815500|ref|XP_002875633.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297321471|gb|EFH51892.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1521

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 263/761 (34%), Positives = 393/761 (51%), Gaps = 85/761 (11%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRF-YVESIRYEMTAESSFPRKEGYLGPLEYSS 1278
            T  +  A++ ++   LE  +V A H+G+ +  VE++R + +A S F          EY++
Sbjct: 776  TNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVR-DSSALSPFECDASS----EYAT 830

Query: 1279 YADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQ----EGEGEEILDK--T 1332
            YA+Y+ +KYG+ L    QPL++ +   +  NLL    + +EE     E +   +  K   
Sbjct: 831  YAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLL---VDFNEEMVVKAEPKAGNVRKKKPN 887

Query: 1333 YYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKI 1387
             +  LPPEL     +P ++++    LPS+M R+ES++LA QL+++I     N+ + ++ I
Sbjct: 888  IHAHLPPELLARIDVPRAVLKSIYLLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSI 947

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            LEA+T  +C E F  ER ELLGD+ LK+V S +LFLKYP K EGQL+R RQ ++SN  L+
Sbjct: 948  LEAVTTLTCPEAFSMERLELLGDSVLKYVASCYLFLKYPDKDEGQLSRQRQSIISNSNLH 1007

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A ++ LQ YI+   F P RW APG   +F    K G     D  +   + K  T    
Sbjct: 1008 RLATNRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCG----IDTREVPLDPKFFT---- 1059

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
               E+  ++ G  +     +R   SK+++D  EALIG YYV GG  A+ H+MKW+G+ V+
Sbjct: 1060 ---ENMTIKIG--KSCDMGHRWTVSKSVSDCAEALIGAYYVSGGLTASLHMMKWLGVNVD 1114

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
             DP  V        +   + +  +   LE  ++ +F  + LL EAITH+S   S    Y+
Sbjct: 1115 FDPNLVVEAISRVSLRCYIPKDDELTELERKIQHEFSAKFLLKEAITHSSVHES--YSYE 1172

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD+VLD LIT+HLF +Y    PG +TDLR+A VNNENFA+VAVK+ LH+HL+  +
Sbjct: 1173 RLEFLGDSVLDFLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHIHLQRCA 1232

Query: 1688 SALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            + L+ QI ++    L    KP      +   + PK LGD+VESIAGA+ +D+  D   VW
Sbjct: 1233 TVLENQINEY----LMSFQKPDETGRSIPSIQGPKALGDVVESIAGALLIDTRLDLDQVW 1288

Query: 1748 QVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQV 1804
            +VF+PLL P+VTP+ L + P REL E C         K S  G  A   +++   D +  
Sbjct: 1289 RVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFREKCSNDGVKAQATIHLQLGDVLLT 1348

Query: 1805 GVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDE----------NGKKRKNGT---- 1850
            G       K+A   AA + L  L+++  +     GD           N   R+  T    
Sbjct: 1349 GDGSEQTNKLALGKAASHLLTQLEKRNISRKISIGDNQSSMDVNLACNHSDRETPTSDSI 1408

Query: 1851 --QTFT--------------RQTLNDICLRRNWPMPLY-------RCVREGGPAHAKR-- 1885
              Q+                R TL++ C +  WP P +       R   E      KR  
Sbjct: 1409 EIQSIVIPVIGPINTKKGGPRGTLHEFCKKHLWPTPTFDTSEEKSRTPFEFTDGDEKRTS 1468

Query: 1886 ---FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
               FT  + +   ++G      GE  P  K + DSA V LL
Sbjct: 1469 FSSFTSTITLRIPNRGAV-MYAGEARPDKKSSFDSAVVELL 1508



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 83/147 (56%), Gaps = 9/147 (6%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI-CNDLQRQNKKMLAVFLVPKVPLVY 365
           Y+L V E AK +N IA L TG  K++I  +LI+++ C+D      K L +FL P V +  
Sbjct: 36  YELKVYEVAKNRNIIAVLGTGIDKSVITKMLIKAMGCSD----TDKRLIIFLAPTVNI-- 89

Query: 366 QQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQV-LVMTAQILLNILRHSIIKM 424
            Q   IR Q    V  Y G  G D W +QRW  E     V LVMT QILL+ LR + +K+
Sbjct: 90  -QCCEIRAQVNLKVEEYFGAKGVDKWTSQRWDEEVSKHDVSLVMTPQILLDALRSAFLKL 148

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEF 451
           E + LLILDECH     HPY+ +M  F
Sbjct: 149 EMVCLLILDECHRTTGNHPYAKLMKIF 175



 Score = 91.3 bits (225), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 1/143 (0%)

Query: 695 AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
           +AV  G V+PK++ L  +L  ++  +  + +I VER++ A V+ +   +  SLS++    
Sbjct: 325 SAVNSGHVSPKLKELFHLLDSFRGEKQKQCLILVERIITAEVIERFVKKEASLSYLNVLY 384

Query: 755 LIGHNNSQEMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           L+G+N S      + Q  I   F +G+V LL  T   EEG  +  C+ ++ FDL KTV +
Sbjct: 385 LVGNNLSTNASAQKTQIEIPNLFHEGKVNLLFITDAVEEGFQVPNCSCMVCFDLPKTVCS 444

Query: 814 YIQSRGRARKPGSDYILMIERGN 836
           Y QS+  A++  S  I+ +ERGN
Sbjct: 445 YSQSQEHAKQSNSKSIMFLERGN 467


>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
 gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
            Full=Dicer-like protein 2a; Short=OsDCL2a
 gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
            sativa Japonica Group]
 gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
            [Oryza sativa Japonica Group]
 gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
 gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1410

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 259/734 (35%), Positives = 389/734 (52%), Gaps = 107/734 (14%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34   ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94   VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
            ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K ++  
Sbjct: 154  LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLNPH 213

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
             + + +I  +E+ ++S V T+     L +++P  S  +V++D +     LH  +      
Sbjct: 214  -NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANI------ 266

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL-RAINYALGE 598
                  S   R   + + A D       R+++G S     + A   I KL     Y L  
Sbjct: 267  -----LSCLNRLNKKHIEALD-------RKLHGSS----LENAKQRISKLHHTFVYCLYN 310

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG W A K A+     +Q+ E  +    + F    L K         VEG +     +V 
Sbjct: 311  LGVWLAAKAAE-----VQSYEENS----LSFWGETLDKN--------VEGFIRNYSEEVH 353

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
               + F++ G                   H+     A   DG +TPKV  LI+ LL+Y+H
Sbjct: 354  RELSCFLKNG-------------------HIGEKFPADSQDGILTPKVHCLIRTLLQYRH 394

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIAK 775
             +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E +  
Sbjct: 395  MQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNH--TEIVES 452

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ RG
Sbjct: 453  FRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRG 512

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVEST 888
            ++   T      N+E+ L    I R      +++ RL S+   P        T Y+VEST
Sbjct: 513  DVEAQT------NAEKFLASGQIMR------EESLRLGSISCQPLENTLCEDTYYRVEST 560

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
             A+V+LNS+V LIHF+CS+LPSD Y    P F +   +K  G    +C L LP ++P + 
Sbjct: 561  RAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDI---DKASG----TCTLHLPKSSPVQT 613

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPG 1006
            +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P   
Sbjct: 614  VN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP--- 668

Query: 1007 TARHREFYPEGVAD 1020
                  ++PE   D
Sbjct: 669  -----SYFPEEFVD 677



 Score =  343 bits (880), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 220/615 (35%), Positives = 330/615 (53%), Gaps = 66/615 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 844  LKNSIVCTPHNNI-FYVISGFLDLDANSCLPQHDGTV-----VTYKDYFKTRHGLTLTFE 897

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 898  NQPLLAGSKHVKVRNFLHNCYSKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 950

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 951  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 1010

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 1011 LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 1070

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +D     F          L  +  Y++ +                
Sbjct: 1071 DW----IIPCLDYDERDNKKISF----------LAPNGMYSQRKMS-------------- 1102

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 1103 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 1158

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              ++  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 1159 --INVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1216

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  +++E  +   
Sbjct: 1217 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFT 1276

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 1277 GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 1333

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATV-------EVYIDGVQVGVAQNPQKKMAQKL 1818
             PV+ LQE C +++  + Y+ +    +++V       E      + G  +   KK+A K 
Sbjct: 1334 DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKA 1393

Query: 1819 AARNALAVLKEKETA 1833
              ++ +A  K+ E A
Sbjct: 1394 VLKDLIAGHKDTEAA 1408


>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
 gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
          Length = 1492

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 264/768 (34%), Positives = 395/768 (51%), Gaps = 99/768 (12%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL-EYSS 1278
            T  +  A++  N  +++  +V A H+G+ + +  +  + +AES+F   EG    + E+S+
Sbjct: 757  TNLIHFANALVNVENIKDMVVLAIHTGRIYSIVKVVNDSSAESAF---EGNADNVTEFST 813

Query: 1279 YADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILD-------- 1330
            Y +Y+ ++YG+ L+   QPL+R       K   +P   H      EG  + D        
Sbjct: 814  YTEYFNKRYGIVLMHPGQPLLR------LKQSHNPH-NHLVNFNDEGLLVCDSKDGMVGR 866

Query: 1331 -KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPA 1384
             +  +V +PPEL     +P S+V+    +PS+M R+E ++LA QL+ +I     N+ +P+
Sbjct: 867  KQQQHVHMPPELLIKIDVPISVVKSIYLMPSLMHRLECLMLASQLRQEIDCHAPNFYIPS 926

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S ILEA+T   C E+F  ER ELLGD+ LK+ VS  LFLKYP KHEGQL+  R   V N 
Sbjct: 927  SLILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLSSWRSGAVCNS 986

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV-FDEDTKDGDSSLFDQEKSVAEDKLGT 1503
             L++      +Q YI    F P RWAAPG   V      K G  +L          ++  
Sbjct: 987  TLHKLGTDCKVQGYILDSAFDPRRWAAPGQKSVRTPAPCKCGVDTL----------EVPL 1036

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
            D+ + + E   ++ G+     S +R + SKT++D VE++IG YYV GG  AA H+MKW G
Sbjct: 1037 DRKF-QTESAIVKVGK--PCDSGHRWMGSKTISDCVESVIGAYYVSGGLIAAIHVMKWFG 1093

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV 1623
            I  E DP  +      A +   + +  +  +LE  L   F  + +L EA+THAS    GV
Sbjct: 1094 INAELDPSLISEAITSASLRSYIPKEDEIKSLESKLGYTFGVKFVLQEAMTHASIQEQGV 1153

Query: 1624 S-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
            + CYQRLEF+GD+VLD LIT HL+ S+T++ PG LTDLR+A+VNN+NFA+VAVK  L+ H
Sbjct: 1154 TYCYQRLEFLGDSVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTH 1213

Query: 1683 LRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD--CKAPKVLGDIVESIAGAIFLDSG 1740
            L H S+ L  QI ++V            NSF   D   KAPK LGD++ESIAGA+ +D+ 
Sbjct: 1214 LLHCSTLLQSQITEYV------------NSFHESDQGTKAPKALGDLIESIAGALLIDTK 1261

Query: 1741 RDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI- 1799
             +   VW++F+PLL P+VTPE L + P+REL E C      ++ K ++   +   ++++ 
Sbjct: 1262 FNLDGVWRIFKPLLSPIVTPEKLELPPLRELVELCDSIGVFVKEKCTKKAEMVHAQLWVQ 1321

Query: 1800 --DGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKG------------------ 1839
              + +  G      +K A+  AA   L  L+   +                         
Sbjct: 1322 LDNELLSGEGYEKNRKAAKGKAASCLLKKLQVCNSGNCNHAFFCFLMNSIVPSNIVEYLA 1381

Query: 1840 -------DENGKKRKNGTQTFTRQTLNDICLRRNWPMPLY-------RCVREGGPAHAKR 1885
                    E+  K+K G +T    +L D+C +  W MP +       R   E G    KR
Sbjct: 1382 KSPPFAVIESINKKKGGPRT----SLYDLCKKVQWTMPTFDTTETKSRTAIEFGEGPDKR 1437

Query: 1886 -----FTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
                 +   + +N    G   EC GE     K + DSAA+ +L  L K
Sbjct: 1438 TGFNSYVSKIIMNIPSYG-VVECAGEASADKKTSYDSAALAMLNELEK 1484



 Score =  291 bits (744), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 238/778 (30%), Positives = 342/778 (43%), Gaps = 158/778 (20%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQ  V E A K+NTIA LETGAGKT+IAV+LI+ I   +     K L +FL P V LV  
Sbjct: 1    YQSKVFEVAVKRNTIAVLETGAGKTMIAVMLIKQIGQAVFYSGVKRLILFLAPTVHLV-N 59

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
            QA  I+ QT + VG Y G  G D W  + W++E D   VLVMT QILL+ LR + + ++ 
Sbjct: 60   QACFIKSQTNFRVGEYYGAKGIDEWSLKSWEKEIDEHDVLVMTPQILLDALRKAFLNLKM 119

Query: 427  INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
            ++LLILDECH +   HPY  +M  +                                   
Sbjct: 120  VSLLILDECHRSTGNHPYKKIMKIY----------------------------------- 144

Query: 487  CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQS 546
                        TI+DR E+  +VP   E+   YDKA   W  + +LK       EA+ S
Sbjct: 145  ------------TIEDRAEVHVYVPSAKELCRFYDKA---WCSYVELKDK----IEASWS 185

Query: 547  SSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYK 606
                S     G+  +  K+   ++    ++   D A       + +N  L +LG  CAY+
Sbjct: 186  KFDASMLALQGSTQSCYKDMDDKLKATRKQLSKDHA-------KILN-CLEDLGLICAYE 237

Query: 607  VAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVE 666
              +  L    N             E  L + +S LQC                    F+E
Sbjct: 238  AIKVCLENAGNPT----------GECKLYQEIS-LQCRY------------------FLE 268

Query: 667  GGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAII 726
               + I E  LL     S     D    AA+  G ++PK+  L+++ L +    +   +I
Sbjct: 269  DVLHIIGES-LLHGDNFSLDHGFDC--SAALGFGYISPKLHELLQLFLSFGEAREVLCLI 325

Query: 727  FVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLV 785
            FVER++ A V+ +   ++  L+    + L G N S +    +MQ ET+  FR G+V LL 
Sbjct: 326  FVERIITAKVVERFMKKVEVLAHFTVSYLTGTNASADALAPKMQMETLESFRSGKVNLLF 385

Query: 786  ATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRN 845
            AT V EEG+ +  C+ VIRFDL KTV +Y+QSRGRAR+  S +I M+ERGN      L  
Sbjct: 386  ATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQNNSHFITMLERGNTKQRDQLFE 445

Query: 846  ARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
               SE ++   AI R       +   L +  +     Y V+ TGA V+ +S+        
Sbjct: 446  IIRSEWSMTDTAINRD-----PNVWNLKACASEAAKAYVVDVTGASVTADSS-------- 492

Query: 906  SQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVC 965
                                              LP NA F+ L GP C + +LA+Q VC
Sbjct: 493  ----------------------------------LPPNAAFQTLVGPTCRNQQLAKQLVC 518

Query: 966  LAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGE 1025
            L ACKKLH+MGA  D LLP      +   V          GT + +E +       L G 
Sbjct: 519  LEACKKLHQMGALDDHLLPSVEEPSEIAVVKSKSTSAG-AGTTKRKELHGTACIHALSGS 577

Query: 1026 WILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQV-SDFAVLFSSELDAELASLK 1082
            W     DG T    FH + +   C          ++Q+ S F +L  S+LD ++ +++
Sbjct: 578  WG-EKLDGAT----FHAYKFDFSC--------SIVSQIYSGFILLIESKLDDDVGNIE 622


>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
          Length = 1570

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 256/766 (33%), Positives = 393/766 (51%), Gaps = 83/766 (10%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRK-EGYLGPLEYSSYADYY 1283
            +A+   +   ++  +V + H+G+ + V  +  + TAE SF    +G   P  ++S+ DYY
Sbjct: 818  LANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASP--FTSFVDYY 875

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCF 1343
             QKYG+ +   +QPL+  +      NLL  + ++ +   G+   +  +  +  +PPEL  
Sbjct: 876  HQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPELLI 935

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKILEALTAASCQETFC 1401
               +   +++    LPS++ R++S++LA QL+ +I Y   +P + ILEA+T   C ETF 
Sbjct: 936  HLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGYNQHIPVTLILEAITTLRCCETFS 995

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             ER ELLGD+ LK+VV   LFL+YP KHEGQL+ MR + V N  L+++ + + LQ Y++ 
Sbjct: 996  LERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRD 1055

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
            + F P RW APG + +       G  + F               ++  Y  DD      +
Sbjct: 1056 NAFDPRRWVAPGQISLRPFPCNCGIETAF-------------VPSHRRYIRDDPSFFVGK 1102

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP---EEVGCPSR 1578
                 +R + SKT++D VEAL+G YYV GG  AA  +M+W GI ++ D    +EV   + 
Sbjct: 1103 PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNAS 1162

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1637
              C   S+ +  D   LE  LK  F  +GLL+EAITH S    GV  CYQRLEF+GD+VL
Sbjct: 1163 HLC---SLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVL 1219

Query: 1638 DHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF 1697
            D L+T+HL+ ++T++ PG LTDLR+A V+NENFA+  V++ +H HL+HGS  L  QI ++
Sbjct: 1220 DLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEY 1279

Query: 1698 VKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            V+  LE   K          CK PKVLGDI+ESIAGA+F+D+  +  +VW++F+PLL P+
Sbjct: 1280 VRSNLECQGKES-EFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPL 1338

Query: 1758 VTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQKKM 1814
            +TP+ L + P REL E C      L  K +  G    +E+ +   D + V    +  KK 
Sbjct: 1339 ITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDELLVAQGHDRNKKR 1398

Query: 1815 AQKLAARNALAVLKEKETAEAKE-----------KGDENGKKRKNGTQTFTRQTLND--- 1860
            A+  AA   LA LK+++    K+             D       +GTQ  +   LND   
Sbjct: 1399 AKAKAASRILADLKQQQGLSIKQCLSKAKQLDIVTSDLQFDLTSSGTQ-LSYSDLNDYHI 1457

Query: 1861 ----------------------------ICLRRNWPMPLYRCVRE----------GGPAH 1882
                                        +C    WPMP +  V +              +
Sbjct: 1458 LEGLSSVKKEVVLPLKMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTN 1517

Query: 1883 AKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
               F   + ++  D   T    GE     K A+DSA++++L  L +
Sbjct: 1518 FNSFVSTITLHIPD-ATTITFQGERRTDKKSAQDSASLMMLHKLQE 1562



 Score =  196 bits (497), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 185/354 (52%), Gaps = 21/354 (5%)

Query: 675  GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAA 734
            GEL+ S   SG E +          G ++ KV +LI I   +  + +   +IFV+R++ A
Sbjct: 305  GELMKSE--SGSEEL-------TKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITA 355

Query: 735  LVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEG 793
              + +    + + S    + L G + S++  +  +Q  T+  FR G+V LL  T V EEG
Sbjct: 356  KAVERFMRGIVNFSCFSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEG 415

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            +D+  C+ VIRFDL +TV +Y+QSRGRAR+  S++ILMIERGNL     +     +   +
Sbjct: 416  VDVPNCSCVIRFDLPRTVCSYVQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYV 475

Query: 854  RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
            +  A+ R    H    S  +S+  +    YQV+STGA ++ +  V LI  YC +LP DRY
Sbjct: 476  KNCALYR----HPNALSYDLSIQGM--YTYQVQSTGATITADCCVNLIRKYCEKLPKDRY 529

Query: 914  SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
             + +P F     E       + C L LP NA F+ + GP+ SS  L++Q V L ACKKLH
Sbjct: 530  FMPKPSF-----EVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLH 584

Query: 974  EMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
            ++G   D L+P        +    +++    PGT + +E +       L G WI
Sbjct: 585  QLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWI 638



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 22/140 (15%)

Query: 309 LDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQA 368
           ++V E A + NTIA L+TG+GKT++AV+L R                          +Q 
Sbjct: 44  VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHAR----------------------RQF 81

Query: 369 EVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAIN 428
           EVIRE T   V    G      W A  W+ E    +++VMT QILL+ LRH+ + M A++
Sbjct: 82  EVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAVS 141

Query: 429 LLILDECHHAVKKHPYSLVM 448
           LLI DECH A   HPY+ +M
Sbjct: 142 LLIFDECHRACGSHPYARIM 161


>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
            Full=Dicer-like protein 3b; Short=OsDCL3b
          Length = 1637

 Score =  382 bits (981), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/582 (37%), Positives = 334/582 (57%), Gaps = 26/582 (4%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRK-EGYLGPLEYSSYAD 1281
            + +A+   +   ++  +V + H+G+ + V  +  + TAE SF    +G   P  ++S+ D
Sbjct: 884  IHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASP--FTSFVD 941

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YY QKYG+ +   +QPL+  +      NLL  + ++ +   G+   +  +  +  +PPEL
Sbjct: 942  YYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPEL 1001

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKILEALTAASCQET 1399
                 +   +++    LPS++ R++S++LA QL+ +I Y   +P + ILEA+T   C ET
Sbjct: 1002 LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGYNQHIPVTLILEAITTLRCCET 1061

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            F  ER ELLGD+ LK+VV   LFL+YP KHEGQL+ MR + V N  L+++ + + LQ Y+
Sbjct: 1062 FSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYV 1121

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            + + F P RW APG + +       G  + F               ++  Y  DD     
Sbjct: 1122 RDNAFDPRRWVAPGQISLRPFPCNCGIETAF-------------VPSHRRYIRDDPSFFV 1168

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP---EEVGCP 1576
             +     +R + SKT++D VEAL+G YYV GG  AA  +M+W GI ++ D    +EV   
Sbjct: 1169 GKPCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFN 1228

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
            +   C   S+ +  D   LE  LK  F  +GLL+EAITH S    GV  CYQRLEF+GD+
Sbjct: 1229 ASHLC---SLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDS 1285

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD L+T+HL+ ++T++ PG LTDLR+A V+NENFA+  V++ +H HL+HGS  L  QI 
Sbjct: 1286 VLDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQIT 1345

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            ++V+  LE   K          CK PKVLGDI+ESIAGA+F+D+  +  +VW++F+PLL 
Sbjct: 1346 EYVRSNLECQGKES-EFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLS 1404

Query: 1756 PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV 1797
            P++TP+ L + P REL E C      L  K +  G    +E+
Sbjct: 1405 PLITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEM 1446



 Score =  342 bits (878), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 235/734 (32%), Positives = 367/734 (50%), Gaps = 86/734 (11%)

Query: 309  LDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-QNKKMLAVFLVPKVPLVYQQ 367
            ++V E A + NTIA L+TG+GKT++AV+L R     ++  +  + + VFL P V LV+QQ
Sbjct: 44   VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103

Query: 368  AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
             EVIRE T   V    G      W A  W+ E    +++VMT QILL+ LRH+ + M A+
Sbjct: 104  FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163

Query: 428  NLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKIC 487
            +LLI DECH A   HPY+ +M EFY  +  + RP VFGMTASPV  KG S+  +C   I 
Sbjct: 164  SLLIFDECHRACGSHPYARIMKEFYFGS--QWRPDVFGMTASPVATKGASTLHNCEAHIS 221

Query: 488  NLESKLDSVVCTIKDRKELEKHVPMPSEVV--------VEYDKAAS-LWSLHEQLKQMEV 538
             LE  LD+ +  ++DR ELE   P P+ +V        V++D   S L    ++   + V
Sbjct: 222  QLELTLDAKIYIVEDRNELESFSP-PTTIVNKYYDAYMVDFDNLKSKLQIFSDEFDSLLV 280

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             ++E+  +  + +      +R +     L + +G                   I Y+L +
Sbjct: 281  GLQESPSNKFKDTDNILETSRKS-----LSRYHG------------------KILYSLND 317

Query: 599  LGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            LG     +V +  + +++    +++    +  +    SY  + +SL++  L +G      
Sbjct: 318  LGPIITSEVVKIHIESVKPLCDSEDCIFSKASLCLHMSYFKEALSLIEEILPQGY----- 372

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
                                GEL+ S   SG E +          G ++ KV +LI I  
Sbjct: 373  --------------------GELMKSE--SGSEEL-------TKRGYISSKVNTLINIFK 403

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE-TI 773
             +  + +   +IFV+R++ A  + +    + + S    + L G + S++  +  +Q  T+
Sbjct: 404  SFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGSTSKDALSPAVQRFTL 463

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
              FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSRGRAR+  S++ILMIE
Sbjct: 464  DLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRGRARRNNSEFILMIE 523

Query: 834  RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVS 893
            RGNL     +     +   ++  A+ R    H    S  +S+  +    YQV+STGA ++
Sbjct: 524  RGNLQQQEHIFRMIQTGYYVKNCALYR----HPNALSYDLSIQGM--YTYQVQSTGATIT 577

Query: 894  LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
             +  V LI  YC +LP DRY + +P F     E       + C L LP NA F+ + GP+
Sbjct: 578  ADCCVNLIRKYCEKLPKDRYFMPKPSF-----EVTIEDGLFKCTLTLPRNAAFQSIVGPL 632

Query: 954  CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREF 1013
             SS  L++Q V L ACKKLH++G   D L+P        +    +++    PGT + +E 
Sbjct: 633  SSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKEL 692

Query: 1014 YPEGVADILQGEWI 1027
            +       L G WI
Sbjct: 693  HGTTCVLALSGTWI 706


>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 265/739 (35%), Positives = 382/739 (51%), Gaps = 83/739 (11%)

Query: 1244 HSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRG 1303
            H+G+ + +  +    +AES F       GP +Y ++ADY+ ++YG+ L F KQPL+R + 
Sbjct: 641  HTGRIYSIVEVVSNTSAESPFDGNSDK-GPPDYITFADYFNKRYGISLSFPKQPLLRLKQ 699

Query: 1304 VSYCKNLLSPRFE---HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPS 1360
                 NLL   F+   ++ ++   G        +V +PPEL     +P  +++ +  LPS
Sbjct: 700  SHNPHNLLV-NFKDEGNTSDKLPSGPAFKRPQMHVHMPPELVLSMDVPKGVLKSSYLLPS 758

Query: 1361 IMRRVESMLLAIQLKDKINYP-----VPASKILEALTAASCQETFCYERAELLGDAYLKW 1415
            ++ R ES++LA QL+ +INY      + +S ILEALT     E F  ER ELLGD+ LK+
Sbjct: 759  LIHRFESLMLASQLRKEINYHSNSLGISSSLILEALTTLGSCENFSLERLELLGDSVLKY 818

Query: 1416 VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL 1475
             VS  LFLK+P+KHEGQL+  RQQ++ N  L+      GLQ YI+   F P RW APG  
Sbjct: 819  AVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYIRDSAFDPRRWVAPGQC 878

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTL 1535
                   K G     D  +    DK  T       ED  +  G+       +R + SKT+
Sbjct: 879  TNRPVPCKCG----VDTVEVPLHDKFCT-------EDPKVVLGKC--CDKGHRWVVSKTI 925

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHAL 1595
            AD  EALIG YYV+GG  AA H+MKW+GI V  D   V      A +    L   +   L
Sbjct: 926  ADCAEALIGAYYVDGGIIAALHVMKWLGIDVNLDVALVVDAITSASLRSCPLGDTEIATL 985

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            E  +   F  +GLL+EA+TH S    GV+ CYQRLEF+GD+VLD LIT H + +Y+++ P
Sbjct: 986  ESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLLITWHYYQNYSDIDP 1045

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNS 1712
            G LTDLR+A+VNNENFA+VAV+  L  HL+H S  L  QI ++VK + E  +  KP    
Sbjct: 1046 GELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVKYLSESQDTGKP---- 1101

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
              L   K PKVLGD+VESIAGAI +D+  +   VW++++PLL P VTP+ L + P+REL 
Sbjct: 1102 --LHGNKGPKVLGDMVESIAGAILIDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELI 1159

Query: 1773 ERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            E C      ++ K +R G     E+ +   D + +G      +K A+  AA   LA L+ 
Sbjct: 1160 ELCDSLGYFIKDKCTRKGETFHAELRLQLQDSLLIGEGYERTRKAARGEAAHRLLAQLET 1219

Query: 1830 KETAEAKEKGDENGKKRK-----------------------------------NGTQTFT 1854
            +  + ++       KKRK                                   N  +   
Sbjct: 1220 RGISYSR----SGSKKRKQNPSHDESAMVLPSSVNCSTDACDPNVETPVIGPINLKKGGP 1275

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKR-----FTYAVRVNTTDKGWTDECVGEPMP 1909
            R TL ++C +  +    YR   E G    KR     F   + +   + G+  EC GE   
Sbjct: 1276 RSTLFELCKKLLY---WYRVQIEIGEGLEKRKGFNSFLSNITLQIPNAGYV-ECEGEARA 1331

Query: 1910 SVKKAKDSAAVLLLELLNK 1928
              K + DSA++++L+ L +
Sbjct: 1332 DKKSSFDSASLVMLQELQQ 1350



 Score =  360 bits (924), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 230/659 (34%), Positives = 352/659 (53%), Gaps = 60/659 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ++V E   ++NTIA L TG+GKT+IAV+LI+ I   ++  + K L +FL P V LV
Sbjct: 40  RRYQMEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLV 99

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           +QQ  VI++ T + V  Y G MG D W+   W++E   + VLVMT QILL+ LR +  ++
Sbjct: 100 HQQFNVIKDHTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRL 159

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
             I L+I+DECH A   HPY+ +M EFYH +  + +P +FGMTASPV  KGVSS VDC  
Sbjct: 160 GTICLMIIDECHRATGNHPYTKIMKEFYHKS--DSKPKIFGMTASPVIRKGVSSSVDCEC 217

Query: 485 KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAA 544
           +I +LES LD+ V  I+D+KE+E +VP   E+ + Y+ A        Q  +++  +E   
Sbjct: 218 QIADLESILDAQVYAIEDKKEVEIYVPSAKEICIFYEPAMP------QTMELKAKIE--- 268

Query: 545 QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
                 + W    A  + ++E ++  Y   +         L      I Y L ELG  CA
Sbjct: 269 ------ALWFKFDASLSNSQEAMQGHYKDVDSKLKALKKRLSSDHLKITYCLDELGIMCA 322

Query: 605 YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF 664
           Y+  +      +N    N + DV ++ES+L     L +  LV G     ++  +++EN  
Sbjct: 323 YEAIKVL---FENVSVPNEESDV-YRESFLQYKHFLEEALLVIG-----ESLSLENENVP 373

Query: 665 VEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRA 724
             G                         +  AV  G ++PK+  L+++   +  +     
Sbjct: 374 TLGFD-----------------------LWKAVELGYISPKLFELLQLFESFGVSRQVLC 410

Query: 725 IIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTL 783
           +IFVER++AA V+ ++  ++ +LS    + + G N S      ++Q ET+  F  G++ L
Sbjct: 411 LIFVERIIAANVIERIVKKVENLSHFTVSYVTGCNASVGALAPKVQKETLELFCHGKLNL 470

Query: 784 LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
           L +T V EEGL +  C+ V+RFDL KTV +Y+QSRGRAR+  S YIL++ERGNL     L
Sbjct: 471 LFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRALL 530

Query: 844 RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
            +   S+ ++   A+ R DL    D   L     +    Y VE+TGA V+ +S+VGL++ 
Sbjct: 531 FDVIRSDRSMTDAAMSR-DL----DACVLKPFSLMETDCYIVEATGASVTADSSVGLVYQ 585

Query: 904 YCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQ 962
           YC +LP D+Y   +P F +       G   Y C+L LP  A  + + GP   +  L++Q
Sbjct: 586 YCKKLPGDKYFSPKPIFQLSY-----GEGSYECQLTLPPTAALQTIVGPSTRNSNLSKQ 639


>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
 gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
            Full=Dicer-like protein 3a; Short=OsDCL3a
 gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica Group]
 gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
          Length = 1651

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 252/759 (33%), Positives = 388/759 (51%), Gaps = 84/759 (11%)

Query: 288  KVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR 347
            + GK+   K +  +   R YQLDV E A ++NTIA L+TGAGKT+IAV+LI+      + 
Sbjct: 16   EAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRT 75

Query: 348  QNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
            +N   + +FL P V LV QQ EVI   T + V  Y G  G D W   RWQ +    QV+V
Sbjct: 76   KNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGPRWQEQISKYQVMV 135

Query: 408  MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
            MT Q+ L  LR++ + ++ ++L+I DECHHA   HPY+ +M EFYH +  E +PSVFGMT
Sbjct: 136  MTPQVFLQALRNAFLILDMVSLMIFDECHHATGNHPYTRIMKEFYHKS--EHKPSVFGMT 193

Query: 468  ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAASL 526
            ASPV  KG+SS +DC  + C LE+ LD+ + T+ DR+E+E  VP   E+   YD K    
Sbjct: 194  ASPVIRKGISSHLDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCF 253

Query: 527  WSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
              L E+L  +              SK+  +       + ++   Y  ++    +    L 
Sbjct: 254  EDLSEELGVL-------------CSKYDALITELQNKRSDM---YKDADDITKESKRRLS 297

Query: 587  QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
            + +  I Y L ++G  CA +  +  +      ER         ++ +L         E+V
Sbjct: 298  KSIAKICYCLDDVGLICASEATKICI------ERGQ-------EKGWLK--------EVV 336

Query: 647  EGAVSKKDAKVVDSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGA------A 696
            +    + DA   +    F E     +    E   L+D  +  G   +D+++ +      A
Sbjct: 337  DATDQQTDA---NGSRLFAENSALHMKFFEEALHLIDKRLQQG---IDMLLNSESGCVEA 390

Query: 697  VADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
               G ++PK+  LI+I   + ++   R +IFV+R + A V+ ++  ++  L+    + L 
Sbjct: 391  AKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSFLT 450

Query: 757  GHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
            G  +S +  T +MQ +T+  FR G+V LL  T VAEEG+ + +C+ VIRFDL +T  +Y+
Sbjct: 451  GGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRSYV 510

Query: 816  QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
            QSRGRAR+  S YILMIERGN+     +             AI R++ S +K  S   S 
Sbjct: 511  QSRGRARQEDSQYILMIERGNVKQNDLI------------SAIVRSETSMVKIASSRESG 558

Query: 876  DAVPGTV-------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
            +  PG V       Y V +TGA V+ +S++ +++ YC +LP D+    +P F    H+  
Sbjct: 559  NLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDD- 617

Query: 929  GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
                 Y C L LP +A  + L GP   +M  A+Q VCL ACKKLHE+GA  D L      
Sbjct: 618  ----GYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLC--LSV 671

Query: 989  GEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
             +   ++   ++G  + GT + +E +         G W+
Sbjct: 672  EDPVPEIVSKNKGTGI-GTTKRKELHGTTRIHAWSGNWV 709



 Score =  370 bits (951), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 253/655 (38%), Positives = 356/655 (54%), Gaps = 70/655 (10%)

Query: 1208 REAMQIHNADMPTGKLM-MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFP- 1265
            RE + I ++D   G L+ +A+    A  L+  +V A H+GK +    I  E++ +S+F  
Sbjct: 865  RELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDIT-ELSGDSAFDG 923

Query: 1266 ---RKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFE---HSE 1319
               +KE      ++ ++A+Y+K+KYG+ L    QPL+  +      NLLS +F    +  
Sbjct: 924  ASDKKE-----CKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVV 978

Query: 1320 EQEGEGEEILDKTY-YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            E    G  +++KT   V +PPEL     LP  ++R     P++M R+ES+ LA QL+ +I
Sbjct: 979  ENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLASQLRSEI 1038

Query: 1379 NYP---VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
             Y    + +  ILEA+T   C E F  ER ELLGD+ LK+ VS  LFLK+P K EGQL+ 
Sbjct: 1039 GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPNKDEGQLSS 1098

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL---------PVFDEDTKDGD 1486
            +R  M+ N  LY+  + + +Q Y++   F P RW APG L         PV  E   D D
Sbjct: 1099 IRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPVKSEVVTD-D 1157

Query: 1487 SSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVY 1546
              + D +K++   K   DK +                    R + SKT+AD VEA+IG Y
Sbjct: 1158 IHIID-DKAIVLGK-ACDKGH--------------------RWMCSKTIADCVEAIIGAY 1195

Query: 1547 YVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            Y  GG  AA  ++KW+GI  E + + +      A V   + +   F  LE  L   F  +
Sbjct: 1196 YAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVK 1255

Query: 1607 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            GLLVEA+TH S+   G   CY+RLEF+GDAVLD L+T++LF S+ +   G LTDLR+A+V
Sbjct: 1256 GLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASV 1315

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-------ELLKPGFNSFGLGDC 1718
            NNENFA+VAVKH  H  L+H S  L  QI ++V   LE       ELL  G         
Sbjct: 1316 NNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNR-LEGSSMDKVELLSDGLP------- 1367

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQ 1778
            K PKVLGDIVESIAGAI LD+  D  VVW +F+PLL P+VTPE L + P REL E C + 
Sbjct: 1368 KGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKH 1427

Query: 1779 AEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
               +       G+  +AT++V +  V + V Q   KK     A  ++L +LK+ E
Sbjct: 1428 GYFVGINCRDQGDTVVATLDVQLKEVLL-VRQGFSKKRKDAKAHASSL-LLKDLE 1480


>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
          Length = 1641

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 272/791 (34%), Positives = 400/791 (50%), Gaps = 87/791 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ    E A  KNTI +LETG GKTL+AVLLI+S+  + + +N K L VFL P V LV
Sbjct: 69   RRYQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLENDKRLIVFLAPTVILV 128

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQA VIR  T   VG Y G    D W    WQ +    +V+VMT Q+ LN L+H  +KM
Sbjct: 129  QQQARVIRIHTDLNVGEYYGSKNVDTWSRAEWQTQIAEVEVMVMTPQVFLNNLQHGFLKM 188

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHT-TSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
              + LLI DECHHA K H Y+ +M  FYH    K + P +FGMTASPV  KGV S +  A
Sbjct: 189  NIVELLIFDECHHAHKNHAYAQIMKGFYHVNVDKGRLPRIFGMTASPVTKKGVKSSIGAA 248

Query: 484  IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL---HEQLKQMEVAV 540
             ++  LE  L S V   KDR+E+E  VP  +  V EY  A +L  L    E+++ + +  
Sbjct: 249  EQLFGLEDLLKSEVFAFKDREEIEFVVPT-AITVEEYYDAPNLDILAPYKEEIEALIIKF 307

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            E+A   +    + +F        K++   +Y + ER      AN     R + + L ELG
Sbjct: 308  EKAHTDAVASVQAEF--------KDQTEFIYKLKER------ANRFH--RDVQFCLEELG 351

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQES---YLSKVVSLLQCELVEGAVSKKDAKV 657
             WCA K A+ +L  + N      +    F+ +   ++ +   LL+  + EG  + + A+ 
Sbjct: 352  LWCASKAAE-YLFKVDNGLEGFGEAIQAFKRNLNLFMRETCGLLKSAVPEGWTAAQTAE- 409

Query: 658  VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
                              EL D                AV+ G +TPKV  LI +L   +
Sbjct: 410  ------------------ELQD----------------AVSKGYLTPKVYHLIGVLFHKR 435

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQEMRTFQMQETIAKF 776
              +D + IIFVER +AA+VL  +  +L  L    +S S+ G +        + Q T+  F
Sbjct: 436  SMKDVKRIIFVERRMAAVVLAYLVNDLQCLRENFRSESICGASIGPHTTRREQQCTMTAF 495

Query: 777  RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
              G + LLVAT +AEEG+D++ C  VIRF+L KT+ + IQSRGRAR+ GS YI+ +ERGN
Sbjct: 496  NKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRGRARRSGSTYIVFLERGN 555

Query: 837  LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV--PGTVYQVESTGAVVSL 894
             +          SE ++R EAI R    H+  +S   S   +  P   Y+V+ TGA V+ 
Sbjct: 556  GAQRDQFSKIXQSELSVRDEAISRV---HIHASSAHNSCLPICEPLKTYRVDCTGASVNT 612

Query: 895  NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVC 954
             +++ L++ +CS+LP D     + E++    +K G    Y C ++LP  +P  ++ G   
Sbjct: 613  ETSIELVNRFCSKLPRDESYTPKAEYL---SQKVG--LLYKCDIKLPFGSPIYEVLGEPQ 667

Query: 955  SSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPGTARHRE 1012
             + RLA+QA  L AC +LH+ GA  D LLP  D       EK+ Q        GT   +E
Sbjct: 668  RTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAADVEKIMQPKNSSGF-GTTAQKE 726

Query: 1013 FYPEGVADILQGEWILSGRDGCTGSKLFHLFM-YTVKCVNNGISKDPFLTQVSDFAVLFS 1071
             +    A+   G W  S     +G+ LF  +M + +  V + +         ++F +L  
Sbjct: 727  LHSVAEAEAFTGHWHTSS----SGAVLFAYYMSFDIHPVEDEMH--------ANFVLLIG 774

Query: 1072 SELDAELASLK 1082
            + LD +++ L+
Sbjct: 775  AALDDDVSKLE 785



 Score =  355 bits (911), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 225/610 (36%), Positives = 326/610 (53%), Gaps = 58/610 (9%)

Query: 1240 VTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLI 1299
            V   H+G  + V  + ++ TA S FP ++      E+ +YA+++K K+G  L    QPL+
Sbjct: 955  VLTGHTGIIYPVLRVLHDTTAHSQFPGEKNR----EFKTYAEFFKIKHGRMLEHPNQPLL 1010

Query: 1300 RGRGVSYCKNLL------------SPRFEHSEEQEG------------------------ 1323
            + +      NLL            + + +  ++ E                         
Sbjct: 1011 QLKQNHRPHNLLPADAGKIEGPTGARKMKKIQKTEATLVEARSVEEDFEVYNMKDQANSS 1070

Query: 1324 --EGEEILDK----TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDK 1377
              E E+++ K    +  V +PPELC +     ++VR A  LPS+M R++S++LA QL+  
Sbjct: 1071 LSEVEKVVSKATMQSTSVEMPPELCVVLKFSAAIVRSAYWLPSVMHRIKSVVLASQLRRS 1130

Query: 1378 INYP-VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            I+ P +P  ++L+ALT   C E F  E  EL GD++LK+ VSR LFL+    +EG L+  
Sbjct: 1131 IDAPKIPVMEVLKALTTTRCNENFNMEALELFGDSFLKYAVSRKLFLESSTANEGVLSTR 1190

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSV 1496
            R + + N  L++ A+ +GL +YI+  +F PSRWAAPG+L     +    + +L    KS 
Sbjct: 1191 RIRSICNEALHKLAVDRGLSAYIRDCQFDPSRWAAPGMLAAKRVNCHCKEDNLLKPFKST 1250

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGD-----SSSYRVLSSKTLADVVEALIGVYYVEGG 1551
                 G   N  E   D ++   ++          +R L SKT++DV EALIG Y +E G
Sbjct: 1251 TSKVTGVFGN--ELLKDKIQTETIKPRIGLTCDKGHRYLCSKTISDVTEALIGAY-LEYG 1307

Query: 1552 KDA--ANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLL 1609
            ++   A   M W GI V  D + +   S+ + V  S     D  A E  +   FK+  L 
Sbjct: 1308 RNCEGALKFMTWAGIDVHFDSKLMEAASKASPVDLSYDYGEDLKAFEKRIGYTFKNIYLP 1367

Query: 1610 VEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            +EA+TH S      + CYQRLEF+GDAVLD L+T+HLF S+    PG LT LR A+VNNE
Sbjct: 1368 LEALTHFSNMVGDQIRCYQRLEFLGDAVLDFLLTRHLFTSHPTSTPGLLTSLRTASVNNE 1427

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIV 1728
             FARVAVKH+LH +LRHGS  L  QI +FVK           +SFGL   +APKVLGD+V
Sbjct: 1428 RFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADDDQKNSSFGLNGLEAPKVLGDLV 1487

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASR 1788
            ESIAGAI +D+  D   VW V  PLL+P+VTP TL +HPV EL+E C  +   ++Y   +
Sbjct: 1488 ESIAGAILVDTCFDLDKVWAVMMPLLEPIVTPATLDIHPVTELEELCMSKGYSIKYGVHK 1547

Query: 1789 SGNLATVEVY 1798
                 +  +Y
Sbjct: 1548 EDECNSRAIY 1557


>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
 gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
            [Physcomitrella patens subsp. patens]
          Length = 1460

 Score =  379 bits (972), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 273/796 (34%), Positives = 401/796 (50%), Gaps = 102/796 (12%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQ    E A  KNTI +LETG GKTL+AVLLI+S+  + + +N K L VFL P V LV Q
Sbjct: 4    YQQQAFEAALNKNTILYLETGCGKTLVAVLLIKSLAKNTRLENDKRLIVFLAPTVILVQQ 63

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
            QA VIR  T   VG Y G    D W    WQ +    +V+VMT Q+ LN L+H  +KM  
Sbjct: 64   QARVIRIHTDLNVGEYYGSKNVDTWSRAEWQTQIAEVEVMVMTPQVFLNNLQHGFLKMNI 123

Query: 427  INLLILDECHHAVKKHPYSLVMSEFYHT-TSKEKRPSVFGMTASPVNLKGVSSQVDCAIK 485
            + LLI DECHHA K H Y+ +M  FYH    K + P +FGMTASPV  KGV S +  A +
Sbjct: 124  VELLIFDECHHAHKNHAYAQIMKGFYHVNVDKGRLPRIFGMTASPVTKKGVKSSIGAAEQ 183

Query: 486  ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL---HEQLKQMEVAVEE 542
            +  LE  L S V   KDR+E+E  VP  +  V EY  A +L  L    E+++ + +  E+
Sbjct: 184  LFGLEDLLKSEVFAFKDREEIEFVVPT-AITVEEYYDAPNLDILAPYKEEIEALIIKFEK 242

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            A   +    + +F        K++   +Y + ER      AN     R + + L ELG W
Sbjct: 243  AHTDAVASVQAEF--------KDQTEFIYKLKER------ANRFH--RDVQFCLEELGLW 286

Query: 603  CAYKVA----------QSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSK 652
            CA K A          + F  A+Q  +R    L++  +E+          C L++ AV +
Sbjct: 287  CASKAAEYLFKVDNGLEGFGEAIQAFKR---NLNLFMRET----------CGLLKSAVPE 333

Query: 653  KDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
              A++V  E                               +  AV+ G +TPKV  LI +
Sbjct: 334  GSARLVKKE-------------------------------LQDAVSKGYLTPKVYHLIGV 362

Query: 713  LLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQEMRTFQMQE 771
            L   +  +D + IIFVER +AA+VL  +  +L  L    +S S+ G +        + Q 
Sbjct: 363  LFHKRSMKDVKRIIFVERRMAAVVLAYLVNDLQCLRENFRSESICGASIGPHTTRREQQC 422

Query: 772  TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
            T+  F  G + LLVAT +AEEG+D++ C  VIRF+L KT+ + IQSRGRAR+ GS YI+ 
Sbjct: 423  TMTAFNKGEINLLVATELAEEGIDVKNCGEVIRFNLPKTLRSNIQSRGRARRSGSTYIVF 482

Query: 832  IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV--PGTVYQVESTG 889
            +ERGN +        + SE ++R EAI R    H+  +S   S   +  P   Y+V+ TG
Sbjct: 483  LERGNGAQRDQFSKIKQSELSVRDEAISRV---HIHASSAHNSCLPICEPLKTYRVDCTG 539

Query: 890  AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
            A V+  +++ L++ +CS+LP D     + E++    +K G    Y C ++LP  +P  ++
Sbjct: 540  ASVNTETSIELVNRFCSKLPRDESYTPKAEYL---SQKVG--LLYKCDIKLPFGSPIYEV 594

Query: 950  EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPGT 1007
             G    + RLA+QA  L AC +LH+ GA  D LLP  D       EK+ Q        GT
Sbjct: 595  LGEPQRTSRLAKQATALEACTQLHKAGALDDNLLPSLDFELAADVEKIMQPKNSSGF-GT 653

Query: 1008 ARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM-YTVKCVNNGISKDPFLTQVSDF 1066
               +E +    A+   G W  S     +G+ LF  +M + +  V + +         ++F
Sbjct: 654  TAQKELHSVAEAEAFTGHWHTSS----SGAVLFAYYMSFDIHPVEDEMH--------ANF 701

Query: 1067 AVLFSSELDAELASLK 1082
             +L  + LD +++ L+
Sbjct: 702  VLLIGAALDDDVSKLE 717



 Score =  370 bits (949), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 323/572 (56%), Gaps = 25/572 (4%)

Query: 1240 VTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLI 1299
            V   H+G  + V  + ++ TA S FP ++      E+ +YA+++K K+G  L    QPL+
Sbjct: 872  VLTGHTGIIYPVLRVLHDTTAHSQFPGEKNR----EFKTYAEFFKIKHGRMLEHPNQPLL 927

Query: 1300 RGRGVSYCKNLLSPRFEHSEEQEGEGEEILDK----TYYVFLPPELCFIHPLPGSLVRGA 1355
            + +      NLL      ++  + EG  ++ K    +  V +PPELC +     ++VR A
Sbjct: 928  QLKQNHRPHNLLP-----ADAGKIEGTPLVSKATMQSTSVEMPPELCVVLKFSAAIVRSA 982

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDAYLK 1414
              LPS+M R++S++LA QL+  I+ P +P  ++L+ALT   C E F  E  EL GD++LK
Sbjct: 983  YWLPSVMHRIKSVVLASQLRRSIDAPKIPVMEVLKALTTTRCNENFNMEALELFGDSFLK 1042

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            + VSR LFL+    +EG L+  R + + N  L++ A+ +GL +YI+  +F PSRWAAPG+
Sbjct: 1043 YAVSRKLFLESSTANEGVLSTRRIRSICNEALHKLAVDRGLSAYIRDCQFDPSRWAAPGM 1102

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD-----SSSYRV 1529
            L     +    + +L    KS      G   N  E   D ++   ++          +R 
Sbjct: 1103 LAAKRVNCHCKEDNLLKPFKSTTSKVTGVFGN--ELLKDKIQTETIKPRIGLTCDKGHRY 1160

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDA--ANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
            L SKT++DV EALIG Y +E G++   A   M W GI V  D + +   S+ + V  S  
Sbjct: 1161 LCSKTISDVTEALIGAY-LEYGRNCEGALKFMTWAGIDVHFDSKLMEAASKASPVDLSYD 1219

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
               D  A E  +   FK++ L +EA+TH S      + CYQRLEF+GDAVLD L+T+HLF
Sbjct: 1220 YGEDLKAFEKRIGYTFKNKYLPLEALTHFSNMVGDQIRCYQRLEFLGDAVLDFLLTRHLF 1279

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
             S+    PG LT LR A+VNNE FARVAVKH+LH +LRHGS  L  QI +FVK       
Sbjct: 1280 TSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLLHQIEEFVKSFEAADD 1339

Query: 1707 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMH 1766
                +SFGL   +APKVLGD+VESIAGAI +D+  D   VW V  PLL+P+VTP TL +H
Sbjct: 1340 DQKNSSFGLNGLEAPKVLGDLVESIAGAILVDTCFDLDKVWAVMMPLLEPIVTPATLDIH 1399

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNLATVEVY 1798
            PV EL+E C  +   ++Y   +     +  +Y
Sbjct: 1400 PVTELEELCMSKGYSIKYGVHKEDECNSRAIY 1431


>gi|78099743|gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
          Length = 1116

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/575 (37%), Positives = 331/575 (57%), Gaps = 26/575 (4%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRK-EGYLGPLEYSSYADYY 1283
            +A+   +   ++  +V + H+G+ + V  +  + TAE SF    +G   P  ++S+ DYY
Sbjct: 366  LANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKASP--FTSFVDYY 423

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCF 1343
             QKYG+ +   +QPL+  +      NLL  + ++ +   G+   +  +  +  +PPEL  
Sbjct: 424  HQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQIHARVPPELLI 483

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKILEALTAASCQETFC 1401
               +   +++    LPS++ R++S++LA QL+ +I Y   +P + ILEA+T   C ETF 
Sbjct: 484  HLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIGYNQHIPVTLILEAITTLRCCETFS 543

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             ER ELLGD+ LK+VV   LFL+YP KHEGQL+ MR + V N  L+++ + + LQ Y++ 
Sbjct: 544  LERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGYVRD 603

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
            + F P RW APG + +       G  + F               ++  Y  DD      +
Sbjct: 604  NAFDPRRWVAPGQISLRPFPCNCGIETAF-------------VPSHRRYIRDDPSFVVGK 650

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP---EEVGCPSR 1578
                 +R + SKT++D VEAL+G YYV GG  AA  +M+W GI ++ D    +EV   + 
Sbjct: 651  PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVKFNAS 710

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVL 1637
              C   S+ +  D   LE  LK  F  +GLL+EAITH S    GV  CYQRLEF+GD+VL
Sbjct: 711  HLC---SLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVL 767

Query: 1638 DHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF 1697
            D L+T+HL+ ++T++ PG LTDLR+A V+NENFA+  V++ +H HL+HGS  L  QI ++
Sbjct: 768  DLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLGQITEY 827

Query: 1698 VKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            V+  LE   K          CK PKVLGDI+ESIAGA+FLD+  +  +VW++F+PLL P+
Sbjct: 828  VRSNLECQGKES-EFLQHTTCKVPKVLGDIMESIAGAVFLDTDFNVDMVWEIFEPLLSPL 886

Query: 1758 VTPETLPMHPVRELQERCQQQAEGLEYKASRSGNL 1792
            +TP+ L + P REL E C      L  + +  G +
Sbjct: 887  ITPDKLALPPYRELLELCSHIGCFLNSECTSKGEV 921



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 11/197 (5%)

Query: 831  MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
            MIERGNL     +     +   ++  A+ R    H    S  +S+  +    YQV+STGA
Sbjct: 1    MIERGNLQQQEHIFRMIQTGYYVKNCALYR----HPNALSYDLSIQGM--YTYQVQSTGA 54

Query: 891  VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLE 950
             ++ +  V LI  YC +LP DRY + +P F     E       + C L LP NA F+ + 
Sbjct: 55   TITADCCVNLIRKYCEKLPKDRYFMPKPSF-----EVTIEDGLFKCTLTLPRNAAFQSIV 109

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARH 1010
            GP+ SS  L++Q V L ACKKLH++G   D L+P        +    +++    PGT + 
Sbjct: 110  GPLSSSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKR 169

Query: 1011 REFYPEGVADILQGEWI 1027
            +E +       L G WI
Sbjct: 170  KELHGTTCVLALSGTWI 186


>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
          Length = 1517

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/619 (37%), Positives = 342/619 (55%), Gaps = 29/619 (4%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLE-YSSYAD 1281
            + +A+   +   ++  +V + H+G+ + V  +  + TA+ SF   E Y G    ++S+ D
Sbjct: 827  IHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSF--DEMYNGKASPFASFVD 884

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YY QKYG+ +    QPL+  +      NLL  + ++ +   G    +  +  +  +PPEL
Sbjct: 885  YYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL 944

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP--VPASKILEALTAASCQET 1399
                 +   +++    LPS+M RV+S++LA QL+  I+Y   +P+S ILEA+T   C E+
Sbjct: 945  LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRSNISYIQRIPSSLILEAITTLRCCES 1004

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            F  ER ELLGD+ LK+V+   LFL+YP KHEG L+ MR + V N  L+++ + + LQ YI
Sbjct: 1005 FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 1064

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE-YEDDDMEDG 1518
            +   F P RW APG + +       G  + F                +N  Y  DD    
Sbjct: 1065 RDAAFDPRRWVAPGQISLRPFPCNCGIETAF--------------VPFNGGYISDDPSFV 1110

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
              +     +R + SKT++D VEAL+G YYV GG  AA  +M+W GI V  D E V     
Sbjct: 1111 VGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKY 1170

Query: 1579 PACVPESVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
             +        S   D   LE  LK  F  +GLL+EAI+H S    GV  CYQRLEF+GD+
Sbjct: 1171 NSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDS 1230

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD LIT+HL+ ++T++ PG LTDLR+A+V+NENFA+  V++ +H HL+HGS  L  Q+ 
Sbjct: 1231 VLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVT 1290

Query: 1696 DFVKEVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            ++V+  LE   K   N F     CKAPKVLGDI+ESI GAIF+D   D  +VW++ +PLL
Sbjct: 1291 EYVRSNLEYHGKE--NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLL 1348

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQ 1811
             PM+TP+ L + P REL E C      +E K +  G    +E+ +   D   +    +  
Sbjct: 1349 SPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRN 1408

Query: 1812 KKMAQKLAARNALAVLKEK 1830
             K A+  AA   L  +K++
Sbjct: 1409 GKTAKANAAARILVDMKKR 1427



 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 195/384 (50%), Gaps = 30/384 (7%)

Query: 700  GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            G ++ KV+SLI I   +  +E+   +IFVER+  A  + +      + S    + L G +
Sbjct: 332  GYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVNFSRFSISYLTGGS 391

Query: 760  NSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
             S++  +  +Q  T+  FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSR
Sbjct: 392  TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSR 451

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            GRARK  S Y+LMIERGNL+    +         +R E   +T   H +  +  + +   
Sbjct: 452  GRARKSSSSYVLMIERGNLAQQEHIF------RIIRTEYYVKTFALHKQPNTPSLDLPLQ 505

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               +Y VESTGA ++    V LI+ YC +LP DRY + +P F  E   K G    Y C L
Sbjct: 506  EKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCF--EVGLKDGS---YQCTL 560

Query: 939  QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQN 998
             +P NA F  + GP  SS  LA+Q VCL ACKKLHE+G   D L+P     E+   +D +
Sbjct: 561  TMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP---LTEEPMDIDTD 617

Query: 999  DEGEPL---PGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
               +     PGT + +E +       L G WI         + + + + +  +C   G  
Sbjct: 618  TTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESE-----TVILNAYTFDFRCDQEG-- 670

Query: 1056 KDPFLTQVSDFAVLFSSELDAELA 1079
                    + F +L  S LD ++A
Sbjct: 671  -----ELYAGFVLLMESVLDDDVA 689



 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 3/206 (1%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDLQRQNKKMLAVFLVPKV 361
           Q R YQ++V   A + NTIA L+TG+GKT++A++L R  +      +  + + VFL P V
Sbjct: 32  QPRGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGEALRRIVVFLAPTV 91

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV+QQ EVIRE T        G  G   W+A+RW+    TK+++VMT QILL+ LRH+ 
Sbjct: 92  HLVHQQFEVIREYTDLDAVECHGASGVGHWNAKRWKEAIGTKEIVVMTPQILLDALRHAF 151

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + M  ++LLI DECH A   HPYSL+M EFY     E RP++FGMTASPV+ KG S+  D
Sbjct: 152 LTMRVMSLLIFDECHRACGNHPYSLIMKEFY--IDSEWRPAIFGMTASPVSKKGASTIED 209

Query: 482 CAIKICNLESKLDSVVCTIKDRKELE 507
           C  +I  LE  LD+ V  ++DR ELE
Sbjct: 210 CEAQIAQLELVLDAKVYIVEDRNELE 235


>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
          Length = 1199

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/619 (37%), Positives = 342/619 (55%), Gaps = 29/619 (4%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLE-YSSYAD 1281
            + +A+   +   ++  +V + H+G+ + V  +  + TA+ SF   E Y G    ++S+ D
Sbjct: 509  IHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSF--DEMYNGKASPFASFVD 566

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YY QKYG+ +    QPL+  +      NLL  + ++ +   G    +  +  +  +PPEL
Sbjct: 567  YYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL 626

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP--VPASKILEALTAASCQET 1399
                 +   +++    LPS+M RV+S++LA QL+  I+Y   +P+S ILEA+T   C E+
Sbjct: 627  LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRSNISYIQRIPSSLILEAITTLRCCES 686

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            F  ER ELLGD+ LK+V+   LFL+YP KHEG L+ MR + V N  L+++ + + LQ YI
Sbjct: 687  FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 746

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE-YEDDDMEDG 1518
            +   F P RW APG + +       G  + F                +N  Y  DD    
Sbjct: 747  RDAAFDPRRWVAPGQISLRPFPCNCGIETAF--------------VPFNGGYISDDPSFV 792

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
              +     +R + SKT++D VEAL+G YYV GG  AA  +M+W GI V  D E V     
Sbjct: 793  VGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKY 852

Query: 1579 PACVPESVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
             +        S   D   LE  LK  F  +GLL+EAI+H S    GV  CYQRLEF+GD+
Sbjct: 853  NSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDS 912

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD LIT+HL+ ++T++ PG LTDLR+A+V+NENFA+  V++ +H HL+HGS  L  Q+ 
Sbjct: 913  VLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVT 972

Query: 1696 DFVKEVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            ++V+  LE   K   N F     CKAPKVLGDI+ESI GAIF+D   D  +VW++ +PLL
Sbjct: 973  EYVRSNLEYHGKE--NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLL 1030

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQ 1811
             PM+TP+ L + P REL E C      +E K +  G    +E+ +   D   +    +  
Sbjct: 1031 SPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRN 1090

Query: 1812 KKMAQKLAARNALAVLKEK 1830
             K A+  AA   L  +K++
Sbjct: 1091 GKTAKANAAARILVDMKKR 1109



 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 195/384 (50%), Gaps = 30/384 (7%)

Query: 700  GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            G ++ KV+SLI I   +  +E+   +IFVER+  A  + +      + S    + L G +
Sbjct: 14   GYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVNFSRFSISYLTGGS 73

Query: 760  NSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
             S++  +  +Q  T+  FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSR
Sbjct: 74   TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSR 133

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            GRARK  S Y+LMIERGNL+    +         +R E   +T   H +  +  + +   
Sbjct: 134  GRARKSSSSYVLMIERGNLAQQEHIF------RIIRTEYYVKTFALHKQPNTPSLDLPLQ 187

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               +Y VESTGA ++    V LI+ YC +LP DRY + +P F  E   K G    Y C L
Sbjct: 188  EKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCF--EVGLKDGS---YQCTL 242

Query: 939  QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQN 998
             +P NA F  + GP  SS  LA+Q VCL ACKKLHE+G   D L+P     E+   +D +
Sbjct: 243  TMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP---LTEEPMDIDTD 299

Query: 999  DEGEPL---PGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
               +     PGT + +E +       L G WI         + + + + +  +C   G  
Sbjct: 300  TTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESE-----TVILNAYTFDFRCDQEG-- 352

Query: 1056 KDPFLTQVSDFAVLFSSELDAELA 1079
                    + F +L  S LD ++A
Sbjct: 353  -----ELYAGFVLLMESVLDDDVA 371


>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
          Length = 1440

 Score =  375 bits (963), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/617 (37%), Positives = 340/617 (55%), Gaps = 29/617 (4%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLE-YSSYAD 1281
            + +A+   +   ++  +V + H+G+ + V  +  + TA+ SF   E Y G    ++S+ D
Sbjct: 827  IHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDKTADDSF--DEMYNGKASPFASFVD 884

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YY QKYG+ +    QPL+  +      NLL  + ++ +   G    +  +  +  +PPEL
Sbjct: 885  YYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL 944

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP--VPASKILEALTAASCQET 1399
                 +   +++    LPS+M RV+S++LA QL+  I+Y   +P+S ILEA+T   C E+
Sbjct: 945  LIHIDVATDILKSFYLLPSVMHRVQSLMLASQLRSNISYIQRIPSSLILEAITTLRCCES 1004

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            F  ER ELLGD+ LK+V+   LFL+YP KHEG L+ MR + V N  L+++ + + LQ YI
Sbjct: 1005 FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGIWQSLQGYI 1064

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE-YEDDDMEDG 1518
            +   F P RW APG + +       G  + F                +N  Y  DD    
Sbjct: 1065 RDAAFDPRRWVAPGQISLRPFPCNCGIETAF--------------VPFNGGYISDDPSFV 1110

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
              +     +R + SKT++D VEAL+G YYV GG  AA  +M+W GI V  D E V     
Sbjct: 1111 VGKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKY 1170

Query: 1579 PACVPESVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
             +        S   D   LE  LK  F  +GLL+EAI+H S    GV  CYQRLEF+GD+
Sbjct: 1171 NSNASRMCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDS 1230

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD LIT+HL+ ++T++ PG LTDLR+A+V+NENFA+  V++ +H HL+HGS  L  Q+ 
Sbjct: 1231 VLDLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVT 1290

Query: 1696 DFVKEVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            ++V+  LE   K   N F     CKAPKVLGDI+ESI GAIF+D   D  +VW++ +PLL
Sbjct: 1291 EYVRSNLEYHGKE--NQFLQQATCKAPKVLGDIMESITGAIFIDVNFDVDLVWKIVEPLL 1348

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNPQ 1811
             PM+TP+ L + P REL E C      +E K +  G    +E+ +   D   +    +  
Sbjct: 1349 SPMITPDKLALPPYRELLELCSHLGCFIESKCTSEGEELIIEMKVQLRDEQLIAQGHDRN 1408

Query: 1812 KKMAQKLAARNALAVLK 1828
             K A+  AA   L  +K
Sbjct: 1409 GKTAKANAAARILVDMK 1425



 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/384 (34%), Positives = 195/384 (50%), Gaps = 30/384 (7%)

Query: 700  GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            G ++ KV+SLI I   +  +E+   +IFVER+  A  + +      + S    + L G +
Sbjct: 332  GYISSKVESLINIFKSFGSSEEVLCMIFVERITTAKAVERFMRGNVNFSRFSISYLTGGS 391

Query: 760  NSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
             S++  +  +Q  T+  FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSR
Sbjct: 392  TSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSR 451

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            GRARK  S Y+LMIERGNL+    +         +R E   +T   H +  +  + +   
Sbjct: 452  GRARKSSSSYVLMIERGNLAQQEHIF------RIIRTEYYVKTFALHKQPNTPSLDLPLQ 505

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               +Y VESTGA ++    V LI+ YC +LP DRY + +P F  E   K G    Y C L
Sbjct: 506  EKYIYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCF--EVGLKDGS---YQCTL 560

Query: 939  QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQN 998
             +P NA F  + GP  SS  LA+Q VCL ACKKLHE+G   D L+P     E+   +D +
Sbjct: 561  TMPHNAAFRSIVGPPSSSCNLAKQLVCLEACKKLHELGELDDHLVP---LTEEPMDIDTD 617

Query: 999  DEGEPL---PGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
               +     PGT + +E +       L G WI         + + + + +  +C   G  
Sbjct: 618  TTDKKCVSGPGTTKRKELHGTINVHGLSGNWIHESE-----TVILNAYTFDFRCDQEG-- 670

Query: 1056 KDPFLTQVSDFAVLFSSELDAELA 1079
                    + F +L  S LD ++A
Sbjct: 671  -----ELYAGFVLLMESVLDDDVA 689



 Score =  186 bits (471), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 3/206 (1%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDLQRQNKKMLAVFLVPKV 361
           Q R YQ++V   A + NTIA L+TG+GKT++A++L R  +      +  + + VFL P V
Sbjct: 32  QPRGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGEALRRIVVFLAPTV 91

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV+QQ EVIRE T        G  G   W+A+RW+    TK+++VMT QILL+ LRH+ 
Sbjct: 92  HLVHQQFEVIREYTDLDAVECHGASGVGHWNAKRWKEAIGTKEIVVMTPQILLDALRHAF 151

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + M  ++LLI DECH A   HPYSL+M EFY     E RP++FGMTASPV+ KG S+  D
Sbjct: 152 LTMRVMSLLIFDECHRACGNHPYSLIMKEFY--IDSEWRPAIFGMTASPVSKKGASTIED 209

Query: 482 CAIKICNLESKLDSVVCTIKDRKELE 507
           C  +I  LE  LD+ V  ++DR ELE
Sbjct: 210 CEAQIAQLELVLDAKVYIVEDRNELE 235


>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
 gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
 gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
            Full=Dicer-like protein 2; Short=AtDCL2
 gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
 gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
          Length = 1388

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 269/719 (37%), Positives = 395/719 (54%), Gaps = 99/719 (13%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L+RS    L R+      VFLVP
Sbjct: 20   PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAY-LFRKPSPCFCVFLVP 78

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQAE ++  T   VG Y G+MG DFWD+  W++E D  +VLVMT  ILL+ LRH
Sbjct: 79   QVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRH 138

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGV 476
            S + +  I +LI+DECHHA  KHPY+ +M EFYH    +     P +FGMTAS V  KG 
Sbjct: 139  SFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG- 197

Query: 477  SSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPM--PSEVVVEYDKAAS--LWSLHE 531
               +D   K I  LE+ ++S V T ++   L   VP   PS    ++ K  S    SL E
Sbjct: 198  -ENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE 256

Query: 532  QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            +L+++ +          R S    +G  D  +      V  V +R        L++    
Sbjct: 257  KLERLTI--------KHRLS----LGTLDLNSS----TVDSVEKR--------LLRISST 292

Query: 592  INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
            + Y L +LG   A K AQS L+A QND             S+L   +++    LV+   S
Sbjct: 293  LTYCLDDLGILLAQKAAQS-LSASQND-------------SFLWGELNMFSVALVKKFCS 338

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
                   D+   F+     EI +G  L+  V +       I G A A G +T K   LI+
Sbjct: 339  -------DASQEFLA----EIPQG--LNWSVAN-------INGNAEA-GLLTLKTVCLIE 377

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ 770
             LL Y   E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + +T + Q
Sbjct: 378  TLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQ 437

Query: 771  -ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
             E +  FR G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR   SDY+
Sbjct: 438  NEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYL 497

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG----TVYQV 885
            +M+E G+L   + L    +  + +R+E+++ +          L+    +P      +++V
Sbjct: 498  MMVESGDLLTQSRLMKYLSGGKRMREESLDHS----------LVPCPPLPDDSDEPLFRV 547

Query: 886  ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
            ESTGA V+L+S+V LI+ YCS+LPSD Y    P F + + +        SC L LP + P
Sbjct: 548  ESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLYLPKSCP 600

Query: 946  FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKVDQNDE 1000
             ++++    ++ ++ +QAVCL AC +LH++GA +D L+PD    E    + EK+  N E
Sbjct: 601  VKEVKAE--ANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTE 657



 Score =  338 bits (868), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 58/559 (10%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            +Y +YY++++G++L F  +PL+ GR +    + L     H  +++ E E   D+ + V L
Sbjct: 875  TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL-----HMAKKKKEKEH--DREF-VEL 926

Query: 1338 PPELC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAA 1394
            PPELC   + P+   ++     +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T  
Sbjct: 927  PPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTK 986

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C++ F  E  E LGD++LK+ V + LF      HEG L+  +  M+SN++L Q+   + 
Sbjct: 987  KCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQK 1046

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ +I+ + F P  W  PG             S+ +    S+  D L   +N        
Sbjct: 1047 LQGFIRDECFEPKGWMVPG-----------QSSAAY----SLVNDTLPESRNIY------ 1085

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                      +S R L  K++ADVVE+LIG Y  EGG+ AA   M W+GI+V+    ++ 
Sbjct: 1086 ---------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQ 1136

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
              S     P    + V+   +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+G
Sbjct: 1137 RDS-----PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLG 1191

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD+LITKHL+  Y  L PG LTD+R+A+VNNE +A VAVK  LH H+ + S  L + 
Sbjct: 1192 DSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKH 1251

Query: 1694 IRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            I   V E  +  L+   ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +P
Sbjct: 1252 ISRTVSEFEQSSLQ---STFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKP 1308

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ- 1811
            LL  M+TPET+ +HPVREL E CQ+     +++ S++ +  +  V +   ++  A   + 
Sbjct: 1309 LLGCMITPETVKLHPVRELTELCQKW----QFELSKAKDFDSFTVEVKAKEMSFAHTAKA 1364

Query: 1812 --KKMAQKLAARNALAVLK 1828
              KKMA+KLA +  L +LK
Sbjct: 1365 SDKKMAKKLAYKEVLNLLK 1383


>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
 gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
          Length = 1586

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/584 (38%), Positives = 327/584 (55%), Gaps = 24/584 (4%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLE-YSSYAD 1281
            + +A+   +   ++  +V + H+G+ + V  +  + TA+ SF   E Y G    +SS+ D
Sbjct: 820  IHLANKSLHFSTVKDSVVLSLHTGRIYSVLDLILDTTADDSF--DEMYNGKASPFSSFVD 877

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            YY QKYG+ +    QPL+  +      NLL  + ++ +   G    +  +  +  +PPEL
Sbjct: 878  YYHQKYGIVIQHPGQPLLLLKQSHNAHNLLFSKMKYQDGSTGNPLLVEKEQIHARVPPEL 937

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP--VPASKILEALTAASCQET 1399
                 +   +++    LPS+M RV+S++LA QL+  I+Y   +P+S ILEA+T   C ET
Sbjct: 938  LIHIDVTTDILKSFYLLPSVMHRVQSLMLASQLRRDISYTQRIPSSLILEAITTLRCCET 997

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            F  ER ELLGD+ LK+V+   LFL+YP KHEG L+ MR + V N  L+++ + + LQ YI
Sbjct: 998  FSLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNATLHKHGICRSLQGYI 1057

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            +   F P RW APG + +       G  + F                  EY  DD     
Sbjct: 1058 RDTAFDPRRWVAPGQISLRPFPCNCGIETAFVPFT-------------GEYISDDPSFIV 1104

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
             +     +R + SKT++D VEAL+G YYV GG  AA  +M+W GI V  D E V      
Sbjct: 1105 GKPCDRGHRWMCSKTVSDCVEALVGAYYVGGGITAAIWVMRWFGIDVRCDMELVQKAKYN 1164

Query: 1580 ACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAV 1636
            +   +    S    F  LE  LK  F  +GLL+EA++H S    GV  CYQRLEF+GD+V
Sbjct: 1165 SNASQLCYLSKLKVFEELEAKLKYNFSVKGLLLEAVSHPSLQELGVDYCYQRLEFLGDSV 1224

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            LD LIT+HL+ ++T++ PG LTDLR+A V+NENFA+  V++ +H HL+HGS  L  Q+ +
Sbjct: 1225 LDLLITQHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQVTE 1284

Query: 1697 FVKEVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +V+  LE   K   N F      KAPKVLGDI+ESI GAIF+D   +  +VW++ +PLL 
Sbjct: 1285 YVRSSLEYHGKE--NEFVQQATFKAPKVLGDIMESITGAIFIDVNFNVDLVWKIVEPLLS 1342

Query: 1756 PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
            PM+TP+ L + P REL E C      ++ K +  G    +E+ +
Sbjct: 1343 PMITPDKLALPPYRELLELCSHLGCFIKSKCTSKGEELIIEMTV 1386



 Score =  184 bits (466), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/386 (34%), Positives = 199/386 (51%), Gaps = 34/386 (8%)

Query: 700  GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            G V+ KVQ+LI I   +  +E+   +IFVER++ A  + +      + S    + L G +
Sbjct: 325  GYVSSKVQTLINIFKSFGSSEEVLCMIFVERIMTAKAVERFMRGNVNFSRFSISYLTGGS 384

Query: 760  NSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
             S++  +  +Q  T+  FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSR
Sbjct: 385  TSKDSLSPAVQRFTLDLFRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVCSYVQSR 444

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            GRAR+  S Y+LMIERGNL     +         +R E   +T   H +  +  + +   
Sbjct: 445  GRARRSSSSYVLMIERGNLVQQEHIF------RIIRTEYYVKTFALHKQPNTPSLDLPLQ 498

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               +Y VESTGA ++    V LI+ YC +LP DRY + +P F  E   K G    Y C L
Sbjct: 499  EKYMYHVESTGATITAECCVNLIYKYCEKLPKDRYYLPKPCF--EVGLKDGS---YQCAL 553

Query: 939  QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQN 998
             +P NA F  + GP  S+  LA+Q VCL ACKKLHE+G   D L+P     E+   +D +
Sbjct: 554  TMPPNAAFRSIVGPPSSTCNLAKQLVCLEACKKLHELGELDDHLVP---LTEEPMDIDTD 610

Query: 999  DEGEPL---PGTARHREFYPEGVADI--LQGEWILSGRDGCTGSKLFHLFMYTVKCVNNG 1053
               +     PGT + +E +  G+ ++  L G WI         + + + + +  +C   G
Sbjct: 611  TTDKKCVSGPGTTKRKELH--GIINVHGLSGNWIHESE-----TVILNSYTFDFRCDQEG 663

Query: 1054 ISKDPFLTQVSDFAVLFSSELDAELA 1079
                      + F +L  S LD ++A
Sbjct: 664  -------ETFAGFVLLMESVLDDDVA 682



 Score =  177 bits (450), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 5/244 (2%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDLQRQNKKMLAVFLVPKV 361
           Q R YQ++V   A + NTIA L+TG+GKT++A++L R  +      +  + + VFL P V
Sbjct: 25  QPRGYQVEVFAAALRGNTIAVLDTGSGKTMVAIMLAREHVLRARAGETPRRIVVFLAPTV 84

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV+QQ EVIRE T        G  G   W+A+RW+    +K+++VMT QILL+ LRH+ 
Sbjct: 85  HLVHQQFEVIREYTDLDAVECHGASGVGDWNAKRWKEAIGSKEIVVMTPQILLDALRHAF 144

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + M  ++LLI DECH A   HPYS +M EFY     E RP++FGMTASPV+ +G S+  D
Sbjct: 145 LTMCVMSLLIFDECHRACGNHPYSRIMKEFY--IDSEWRPAIFGMTASPVSKRGASTIED 202

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
           C  +I  LE  L++ V  ++DR ELE        V   YD    L+ L +   ++++  E
Sbjct: 203 CEAQIAQLELVLNAKVYIVEDRNELESFSTGAKIVNKYYD--PYLFDLDDLESKLQMLFE 260

Query: 542 EAAQ 545
           E  +
Sbjct: 261 EVVK 264


>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
          Length = 1386

 Score =  371 bits (953), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 268/719 (37%), Positives = 394/719 (54%), Gaps = 99/719 (13%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L+RS    L R+      VFLVP
Sbjct: 18   PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAY-LFRKPSPCFCVFLVP 76

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQAE ++  T   VG Y G+MG DFWD+  W++E D  +VLVMT  ILL+ LRH
Sbjct: 77   QVVLVTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAILLDALRH 136

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGV 476
            S + +  I +LI+DECHHA  KHPY+ +M EFYH    +     P +FGMTAS V  KG 
Sbjct: 137  SFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKG- 195

Query: 477  SSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPM--PSEVVVEYDKAAS--LWSLHE 531
               +D   K I  LE+ ++S V T ++   L   VP   PS    ++ K  S    SL E
Sbjct: 196  -ENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE 254

Query: 532  QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            +L+++ +          R S    +G  D  +      V  V +R        L++    
Sbjct: 255  KLERLTI--------KHRLS----LGTLDLNSS----TVDSVEKR--------LLRISST 290

Query: 592  INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
            + Y L +LG   A K AQS L+A QND             S+L   +++    LV+   S
Sbjct: 291  LTYCLDDLGILLAQKAAQS-LSASQND-------------SFLWGELNMFSVALVKKFCS 336

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
                   D+   F+     EI +G  L+  V +       I G A A G +T K   LI+
Sbjct: 337  -------DASQEFLA----EIPQG--LNWSVAN-------INGNAEA-GLLTLKTVCLIE 375

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ 770
             LL Y   E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + +T + Q
Sbjct: 376  TLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQ 435

Query: 771  -ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
             E +  FR G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR   SDY+
Sbjct: 436  NEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYL 495

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG----TVYQV 885
            +M+E G+L   +      +  + +R+E+++ +          L+    +P      +++V
Sbjct: 496  MMVESGDLLTQSRSMKYLSGGKRMREESLDHS----------LVPCPPLPDDSDEPLFRV 545

Query: 886  ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
            ESTGA V+L+S+V LI+ YCS+LPSD Y    P F + + +        SC L LP + P
Sbjct: 546  ESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLYLPKSCP 598

Query: 946  FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKVDQNDE 1000
             ++++    ++ ++ +QAVCL AC +LH++GA +D L+PD    E    + EK+  N E
Sbjct: 599  VKEVKAE--ANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTE 655



 Score =  338 bits (868), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 58/559 (10%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            +Y +YY++++G++L F  +PL+ GR +    + L     H  +++ E E   D+ + V L
Sbjct: 873  TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL-----HMAKKKKEKEH--DREF-VEL 924

Query: 1338 PPELC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAA 1394
            PPELC   + P+   ++     +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T  
Sbjct: 925  PPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTK 984

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C++ F  E  E LGD++LK+ V + LF      HEG L+  +  M+SN++L Q+   + 
Sbjct: 985  KCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQK 1044

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ +I+ + F P  W  PG             S+ +    S+  D L   +N        
Sbjct: 1045 LQGFIRDECFEPKGWMVPG-----------QSSAAY----SLVNDTLPESRNIY------ 1083

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                      +S R L  K++ADVVE+LIG Y  EGG+ AA   M W+GI+V+    ++ 
Sbjct: 1084 ---------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQ 1134

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
              S     P    + V+   +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+G
Sbjct: 1135 RDS-----PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLG 1189

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD+LITKHL+  Y  L PG LTD+R+A+VNNE +A VAVK  LH H+ + S  L + 
Sbjct: 1190 DSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKH 1249

Query: 1694 IRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            I   V E  +  L+   ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +P
Sbjct: 1250 ISRTVSEFEQSSLQ---STFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKP 1306

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ- 1811
            LL  M+TPET+ +HPVREL E CQ+     +++ S++ +  +  V +   ++  A   + 
Sbjct: 1307 LLGCMITPETVKLHPVRELTELCQKW----QFELSKAKDFDSFTVEVKAKEMSFAHTAKA 1362

Query: 1812 --KKMAQKLAARNALAVLK 1828
              KKMA+KLA +  L +LK
Sbjct: 1363 SDKKMAKKLAYKEVLNLLK 1381


>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
 gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
          Length = 1758

 Score =  370 bits (950), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 233/633 (36%), Positives = 340/633 (53%), Gaps = 30/633 (4%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            T     A+   +   ++  +  A H+GK + +  +    +AES F       G  +  ++
Sbjct: 955  TNMFHFANCVVDVSSVKDNVALAIHTGKVYCIIDVVDNSSAESPFDGNSDKSGAEDKMTF 1014

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLS--PRFEHSEEQEGEGEEILDKTYYVFL 1337
              Y++++YG+ L   +QPL+R +      NL    P  +  ++    G        +V +
Sbjct: 1015 TQYFQKRYGITLRHPEQPLLRLKQGHNAHNLFLNLPEEDGGDKSSQVGPVAPKVPVHVHI 1074

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN-----YPVPASKILEALT 1392
            P EL  +  +   + +    LPS+M R+ES++L+ QL+ +IN     + +P+S +LEALT
Sbjct: 1075 PSELLCLLDVKRDVYKSMYLLPSLMYRIESLMLSSQLRAEINGHTDNFKIPSSLVLEALT 1134

Query: 1393 AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
               C E F  ER ELLGD+ LK+ VS  L+LKYP+KHEG L+ +RQ  V N  L++    
Sbjct: 1135 TLRCCEKFSMERLELLGDSVLKYAVSCHLYLKYPKKHEGHLSSLRQWAVRNSTLHKLGTD 1194

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              LQ YI+   F P RW APG   +       G  +L          ++  D  ++  ED
Sbjct: 1195 HNLQGYIRDSAFEPRRWIAPGQDCIHTVPCDCGLETL----------EVPLDVKFHT-ED 1243

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
              +  G+L      +R + SKT+AD VEALIG YYV GG  A+ H+MKW+GI    +P  
Sbjct: 1244 PKVVVGKL--CDRGHRWMCSKTIADCVEALIGAYYVGGGLIASLHMMKWLGIDSGLEPSM 1301

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV-SCYQRLEF 1631
            V      A +     +  +  +LE  +  +F  +GLLVEA TH S    G   CY+RLEF
Sbjct: 1302 VDKAITAASLHTYTPKVNEIASLEAKIGYEFSVKGLLVEATTHLSESEHGTGCCYERLEF 1361

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD+VLD LIT HLF S+T + PG LTDLR+A+VNNENFA+ AV+  LH HL H S  L 
Sbjct: 1362 LGDSVLDLLITWHLFQSHTEIDPGELTDLRSASVNNENFAQAAVRRNLHQHLLHSSGLLQ 1421

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
             QI ++ K + E    P  N+  L   KAPK LGD+VESIAGAI +D+  D   VW+VF 
Sbjct: 1422 SQILEYAKVISE----PEDNAVPLQGIKAPKALGDLVESIAGAILIDTKLDLDQVWKVFN 1477

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKAS--RSGNLATVEVYI---DGVQVGV 1806
            PLL P+VTPE L + P+REL +        ++ K S  + G +  VE+ +   +   V  
Sbjct: 1478 PLLSPIVTPEKLELPPLRELMQLSDSLGYFVKVKVSHDKKGTMEHVEIRVQLPNERLVRE 1537

Query: 1807 AQNPQKKMAQKLAARNALAVLKEKETAEAKEKG 1839
             + P KK A+  AA   L  L+++  + +  KG
Sbjct: 1538 GKGPNKKSAKGDAAFQLLKDLEKRGISYSSSKG 1570



 Score =  358 bits (918), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 263/811 (32%), Positives = 399/811 (49%), Gaps = 114/811 (14%)

Query: 308  QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQ 367
            QL+  E AKK+NTIA ++TG+GKTLIA+LLI+     ++    K L VFL P V L   Q
Sbjct: 57   QLEAFEVAKKRNTIAIMDTGSGKTLIAILLIKETGQAIRSSGVKKLIVFLAPTVHL---Q 113

Query: 368  AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
             + I+  T   V  Y G  G D W+ + WQ+E     V+VMT QILL+  R + + +E I
Sbjct: 114  CKNIKLNTDLQVEEYYGSKGVDTWNLKSWQKEISDNDVMVMTPQILLDAFRKAFLSIEMI 173

Query: 428  NLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKIC 487
             L+++DECH A   HPY+ +M+EFYH  ++  +P +FGMTASPV  +GVSS + C  +I 
Sbjct: 174  CLMVIDECHWASGNHPYAKIMAEFYHQANE--KPKIFGMTASPVGKRGVSSTLVCEGQIS 231

Query: 488  NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSS 547
            +LE+ LDS    +KDR E++ ++P   E    YD A      H        A+    +  
Sbjct: 232  DLENILDSRSYVVKDRTEMDVYIPSAKESCRFYDPA----RFH--------ALSLKPKIE 279

Query: 548  SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKV 607
            +  SK   + +      +++ Q +    +  S+  A ++       Y L +LG  CAY+ 
Sbjct: 280  ASWSKCDVLLSEFQSDYKDMDQKFKALHQRMSNELAKIL-------YCLEDLGLLCAYEA 332

Query: 608  AQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEG 667
            A                   K  +   SK+    +CE+      K + + V      ++ 
Sbjct: 333  A-------------------KICQQKFSKIHG--ECEVYR----KANLQCVTIIEEVIKI 367

Query: 668  GTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI--------------- 712
                +    L D  ++     V+     AV  G ++PK+  LIK+               
Sbjct: 368  IEESLH---LADEMILD----VEFDCSKAVGMGYISPKLLELIKLFETFGYVFTKVTLAL 420

Query: 713  --------------LLKYQHTE--DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
                          + +Y+  E      +IFVER++ A V+ +   ++  +S +  A + 
Sbjct: 421  NVFTRTNIGINCISINEYKRVEPSQLLCLIFVERIITAKVIERFVKKVSQISHLTVAYVT 480

Query: 757  GHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
            G N S +    + Q E +  FR G+V LL  T V EEG+ +  C+ VIRFDL  TV +YI
Sbjct: 481  GSNTSADALARKRQKEILDSFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPTTVCSYI 540

Query: 816  QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
            QSRGR+R+  S +ILM+ERGNL     L +   SE ++   A+ +   S+L    R  +V
Sbjct: 541  QSRGRSRRANSQFILMLERGNLKQRNQLFDIIRSERSMNDAAVSKDHESNL----RAFTV 596

Query: 876  DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
                   Y V+STGA V+L+S+V LI+ YC +LP D+YS  +P F+    E  G    + 
Sbjct: 597  RKTES--YCVDSTGASVTLDSSVSLINQYCEKLPRDKYSSAKPNFVSLPMEGGG----HV 650

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
            CKL LP NA F+ L GP    +R A+  VCL ACKKLH+MGA  D L+P      + + +
Sbjct: 651  CKLILPPNAAFQTLVGPSGKDVRQAKTLVCLEACKKLHQMGALNDHLVPFVEDPLEADNI 710

Query: 996  DQNDE----GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVN 1051
             +N E         GT + +E +       L G W     D   G+K FH + +  KC  
Sbjct: 711  IKNKESSAAAAAGAGTTKRKELHGTASVRALCGSW----GDKPDGAK-FHAYKFEFKC-- 763

Query: 1052 NGISKDPFLTQVSDFAVLFSSELDAELASLK 1082
            N +S+       S F +L  S+LD ++ +++
Sbjct: 764  NIVSE-----IYSGFVLLVESKLDDDVGNIE 789


>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
 gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  367 bits (942), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 260/732 (35%), Positives = 393/732 (53%), Gaps = 106/732 (14%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P   AR YQL+ LE+A K NTI FLETG+GKTLIA++L+RS    L R+  + +AVFLVP
Sbjct: 18  PLPFARSYQLEALEKALKHNTIVFLETGSGKTLIAIMLLRSYAY-LLRKPSRFIAVFLVP 76

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           +V LV QQA  +   T   VG Y GEMG DFW+A  W++E +  +VLVMT QILLN LRH
Sbjct: 77  QVVLVRQQAGAVEMHTDLKVGMYWGEMGVDFWNAATWKKEIEKHEVLVMTPQILLNGLRH 136

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNLKGV 476
           S  K++ I ++I+DECHH   KHPY+ +M+EF+H   K      P +FGMTASP+  KG 
Sbjct: 137 SFFKLDLIKVMIVDECHHTRGKHPYASIMTEFFHCELKSGHHDLPRIFGMTASPIKSKGA 196

Query: 477 SSQVDCAIKICNLESKLDSVVCT-------IKDRKELEKHVPMPSEV--VVEYDKAASLW 527
           +S++    +I  LE  ++S + +       ++D  +      M S    V+ +  +    
Sbjct: 197 NSELYYWQQIRELEDIMNSKLLSPFAFGSLLQDEDDPHGTFQMHSTNIHVISHSCSKVFE 256

Query: 528 SLHEQLKQM-EVAVEEAAQ------SSSRRSKWQFMGARDAGAKEELRQVYGVSERTE-- 578
           +     + M    V E+A       S+ +   ++ M   D      L+++  +  + E  
Sbjct: 257 NCIPGTRHMIYTCVSESALAEFIPFSTPKFLFYEHMKIPDGIFASLLKELGNLRTKHEHM 316

Query: 579 ------SDGAA----NLIQKLR-AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDV 627
                 ++ AA    N I K+  A+ + L ELG W A++ AQ FL+              
Sbjct: 317 LEQLDLNESAAVSICNKISKVHSALMFCLEELGVWLAFQAAQ-FLS-------------- 361

Query: 628 KFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGT----------NEIEEGEL 677
                          C               D++  F+ GG           N  ++  L
Sbjct: 362 --------------HC---------------DTDGDFISGGKLDVSGETIVKNFCQDASL 392

Query: 678 LDSHVVSGGEHVDV--IIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAAL 735
             S+  S G+   +   I A +  G +T K+  L++ LL+Y+  ++ R I+FVERV+ A+
Sbjct: 393 AISNCFSDGQECSIGDNIKAHLGAGLLTSKILCLVESLLQYRDLKEIRCIVFVERVITAI 452

Query: 736 VLPKVFAEL-PSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEG 793
           VL  + ++L P     K+  + G+N+  + +T ++Q E + +FR G V ++VATS+ EEG
Sbjct: 453 VLESLLSKLLPKHGSWKTKYIAGNNSGLQSQTRKIQNEIVEEFRKGMVNIIVATSILEEG 512

Query: 794 LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
           LD++ CN+VIRFD + TV ++IQSRGRAR   SDY+LM++RG+ S    L N   S + +
Sbjct: 513 LDVQSCNLVIRFDPSATVSSFIQSRGRARMQNSDYLLMVKRGDFSTHARLENYLASGDIM 572

Query: 854 RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
           R+E++    +      S L+  D +    Y+VE TGAVVSL+S+V LI+FYCS+LPSD Y
Sbjct: 573 RRESLRHASIP----CSPLL--DELDDEFYRVEGTGAVVSLSSSVSLIYFYCSRLPSDGY 626

Query: 914 SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
               P  I+++          +C L LP ++P + +   V  +++  +Q  CL ACKKLH
Sbjct: 627 FKPAPRCIIDKE-------TMTCTLHLPKSSPVQTI--CVQGNIKTLKQKACLEACKKLH 677

Query: 974 EMGAFTDMLLPD 985
             GA TD L+PD
Sbjct: 678 VSGALTDNLVPD 689



 Score =  321 bits (823), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 226/639 (35%), Positives = 333/639 (52%), Gaps = 95/639 (14%)

Query: 1232 AGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ------ 1285
            A  L+  +V   H+G  + +  +  ++   S     +G  G + Y  Y  + K+      
Sbjct: 884  ACVLQNSLVCTPHNGNIYCITGVFEDLNGNSLLKMGDG--GAITYKEY--FAKRPMSDLK 939

Query: 1286 -----KYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPE 1340
                 ++G++L+F ++PL++G+ +    NLL+ R    +E+         K  +V LPPE
Sbjct: 940  LTLDFRHGIQLLFNREPLLKGKHIFPVHNLLN-RCRKQKEKAS-------KNTHVELPPE 991

Query: 1341 LC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK--------DKINYPVPASKILEA 1390
            LC   + P+  S +     +PSIM R+ES+L+A+ LK          +N  +P+ K+LEA
Sbjct: 992  LCEIILSPISISTLYSYTFIPSIMHRLESLLIAVNLKKMHSDHYLQHVN--IPSMKVLEA 1049

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +T   CQE F  E  E LGD++LK+  S+ LF  Y   HEG L+  + +++SN  L +  
Sbjct: 1050 ITTNKCQENFNLESLETLGDSFLKYAASQQLFKIYQNHHEGLLSFKKDKIISNAALCRRG 1109

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             +  LQ +I+ + F P  W  PG                          KLG+D      
Sbjct: 1110 CNHKLQGFIRNESFDPKLWIIPG-------------------------GKLGSDF----- 1139

Query: 1511 EDDDMEDGELEGDSSSY----RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
                + +  L      Y    R + SKT+ADVVEALIG Y   GG+  A   M WIGI+V
Sbjct: 1140 ----LSEEPLSKGRKIYIRGRRKVKSKTIADVVEALIGAYLSTGGEVTALLFMDWIGIKV 1195

Query: 1567 E--SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS 1624
            +  + P E         +     + V+   LE  L   F D  LLVEA+TH S     + 
Sbjct: 1196 DFMNTPYERH-------IQLQAEKFVNVRYLESLLNYSFNDPSLLVEALTHGSYMLPEIP 1248

Query: 1625 -CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GDAVLD+LIT H++  Y  + PG LTDLR+A+VNN+ +A  AVK  L  H+
Sbjct: 1249 RCYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLTDLRSASVNNDCYALSAVKVGLDRHI 1308

Query: 1684 RHGSSALDRQIRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             H S  L + I   VK++ E  L+   ++FG   +   PKVLGD++ES+AGAI +DSG +
Sbjct: 1309 LHASHDLHKHIVATVKKIQEFSLE---STFGWESETAFPKVLGDVIESLAGAILVDSGYN 1365

Query: 1743 TSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYK---ASRSGNLA--TVEV 1797
              VV++  +PLL+P++TPETL + PVREL E CQ+Q    +YK    SR+G  A  T+EV
Sbjct: 1366 KEVVFESIRPLLEPLITPETLRLQPVRELNELCQRQH--FDYKKPIVSRNGRNASVTIEV 1423

Query: 1798 YIDGVQVG-VAQNPQKKMAQKLAARNALAVLKEKETAEA 1835
              +G+     A    K  A+KLA++  L  LKE   A +
Sbjct: 1424 EANGLIFKHTATVADKTTAKKLASKEVLKALKESNFATS 1462


>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
          Length = 1392

 Score =  365 bits (937), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 256/699 (36%), Positives = 365/699 (52%), Gaps = 93/699 (13%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P   AR YQ++ LE+A K+NTI +LETG+GKTLIA++L+RS    L R+     +VFLVP
Sbjct: 19  PLPFARSYQVEALEKAMKRNTIVYLETGSGKTLIAIMLLRSYAY-LFRKPSPCFSVFLVP 77

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           +V LV QQAE ++  T   VG Y G MG DFWDA  W++E DT +VLVMT  ILL+ LRH
Sbjct: 78  QVVLVTQQAEALKRHTDLKVGMYWGSMGVDFWDAPTWKQEVDTYEVLVMTPAILLSALRH 137

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNLKGV 476
           S + +  I +LI DECHHA   H Y+ ++ EFYH   K      P +FGMTASPV  KG 
Sbjct: 138 SFLSLNMIKVLIFDECHHARGNHAYACILKEFYHKELKSATSLVPRIFGMTASPVKTKG- 196

Query: 477 SSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQ 535
              +D   K I  LES ++S V T  +   L + VP  +     Y               
Sbjct: 197 -ENLDSYWKKIHELESLMNSKVYTCANESVLAQFVPFSTPSFKYYTY------------- 242

Query: 536 MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN--LIQKLRAIN 593
             V +  +A++         +   +  AKE L  +  +  ++ +  +    L +   +I 
Sbjct: 243 --VEIPSSARAG-------IIAELEKLAKEHLLALATLDLKSSTVNSIKKRLSKICSSIT 293

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L ELG   A K AQSF +  QND     QL  +F E+                     
Sbjct: 294 YCLDELGILMALKAAQSF-SVSQNDFVLWGQLG-EFSET--------------------- 330

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
                 S   F    +  I       +++  G       I   +  G VT K+  L++ L
Sbjct: 331 ------SIKNFCRDASQAIL------AYIPDGPYWSVANIERNLEAGLVTSKIVCLVESL 378

Query: 714 LKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ-E 771
           L Y   E  R IIFVERV+AA+VL     E LP+ +  K+  + G+N+  + +T + Q E
Sbjct: 379 LGYSSLEKIRCIIFVERVIAAMVLESFLNEILPTYNSWKTKYVAGNNSGLQSQTRKKQNE 438

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
           T+  FR G V ++V+TS+ EEGLD++ CN+V+ FD A  + ++IQS+GRAR P SDY++M
Sbjct: 439 TVEDFRKGLVNIIVSTSILEEGLDVQSCNLVVGFDPASNICSFIQSQGRARMPNSDYLMM 498

Query: 832 IERGNLSHATFLRN-----ARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
           +ERG++   + L        R  E++LR   +    L   KD+S         G  Y V 
Sbjct: 499 VERGDMETKSRLMTYISGGKRMREDSLRYSHVPCQPLP--KDSS---------GDFYAVN 547

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
           STGA+V+L+S+V LI+FYCS+LPSD Y    P F ++  E  G      C L LP +   
Sbjct: 548 STGAIVTLSSSVSLIYFYCSRLPSDEYFKPAPRFDID--EDQG-----KCTLYLPKSCQV 600

Query: 947 EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
           +++   V ++  + +Q  CL AC +LH+ GA TD L+PD
Sbjct: 601 KEVR--VQANRNVLKQTACLKACIQLHKAGALTDHLVPD 637



 Score =  349 bits (895), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 242/670 (36%), Positives = 356/670 (53%), Gaps = 65/670 (9%)

Query: 1173 LRHGMAFGQKSHP-TYGIRGAIAQFDVVKASGLVPDR--EAMQIHNADMPTGKLMMADSC 1229
            LR G+A      P T+  + ++  + V+++  L  +R  E     +A   +  L   D  
Sbjct: 771  LRDGVALDYLLVPSTHEQKASLIDWGVLRSVNLTSNRPRERHVDCSAKDASCILHTKDGL 830

Query: 1230 ANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFP-RKEGYLGPLEYSSYADYYKQKYG 1288
                 L+  +V   H+G  +    I   + A S    RK G +      SY +YY++++ 
Sbjct: 831  FCTCVLQNALVYTPHNGYVYCTRGILSHLHANSILTKRKSGDV------SYMEYYEKRHE 884

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHP 1346
            + L F  +PL+ GR +    N L     H   ++ E E   D+ + V LPPELC   + P
Sbjct: 885  IRLNFVDEPLLNGRHIFTLHNHL-----HMTRKKKEKEH--DREF-VELPPELCHVILSP 936

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERA 1405
            +   ++   + +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T   CQ+ F  E  
Sbjct: 937  ISVDMIYSYKFMPSVMQRIESLLIAFNLKKSIPTVNIPTIKVLEAITTKKCQDQFHLESL 996

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            E LGD++LK+ V + LF  Y   HEG L+ ++ +M+SN+ L ++  ++ LQ +I+ + F 
Sbjct: 997  ETLGDSFLKYAVCQHLFQSYDTHHEGLLSTIKDEMISNVTLCKFGCNQKLQGFIRNECFE 1056

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            P  W  PG             S+ +    ++  D L   +N   Y    M          
Sbjct: 1057 PKGWMVPG-----------QSSAAY----ALVNDYLSESRNM--YIARRMN--------- 1090

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
                L  K++ADVVEALIG Y  EGG+ AA   M W+GI+V  D         P+   E 
Sbjct: 1091 ----LKRKSVADVVEALIGAYLSEGGELAALTFMNWVGIKV--DFTTTMIQREPSIQAEK 1144

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
            +   V+   +E  L  KFKD+ LLVEA+TH S     +  CYQRLEF+GD+VLD+LITKH
Sbjct: 1145 L---VNVRYMESLLNYKFKDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDSVLDYLITKH 1201

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
            L+  Y NL PG LTD+R+A+VNNE +A+VAVK  LH H+ H S  L + I   V E   E
Sbjct: 1202 LYGEYPNLSPGLLTDMRSASVNNECYAQVAVKSNLHKHVLHASHDLHKHISRTVSEF--E 1259

Query: 1705 LLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
             L    +SFG   +   PKVLGD++ES+AGAI +DSG +  VV+   +PLL  M+TPET+
Sbjct: 1260 RLSSVQSSFGWESEIAFPKVLGDVIESLAGAIHVDSGYNKEVVFACIKPLLGCMITPETV 1319

Query: 1764 PMHPVRELQERCQQ-QAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ---KKMAQKLA 1819
             +HPVREL E CQ+ Q E  + K   +G  A   V ++  ++  A   +   KKMA+KLA
Sbjct: 1320 KLHPVRELTELCQKAQFELSKVKGFENGE-AFFPVEVEAKEMSFAHTARAFDKKMAKKLA 1378

Query: 1820 ARNALAVLKE 1829
             +  L  LK+
Sbjct: 1379 YKEVLNSLKK 1388


>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
 gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
          Length = 1604

 Score =  364 bits (935), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 278/877 (31%), Positives = 417/877 (47%), Gaps = 117/877 (13%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            +  + K P   AR YQLD+ ++A ++N I +L TG GKT IAVLLI  +   L R+  + 
Sbjct: 19   TRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL-GHLIRKPSRE 77

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
            + +FL P +PLV QQA VI   T + V  Y G  G++  D Q W+ +    +VLVMT QI
Sbjct: 78   VCIFLAPTIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQI 136

Query: 413  LLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            LL  LRH  IKM +I LLILDECHHA   K+HPY+ +M EFY++ S EK P VFGMTASP
Sbjct: 137  LLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASP 196

Query: 471  VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
            +  KG S++++    I +LE  L + VC++ D +ELE  V  P   V  Y         H
Sbjct: 197  IIGKGGSNKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPVN-----H 250

Query: 531  EQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
              L  + +  ++     S R  +      +D+  K  L+ ++ + E        N+I   
Sbjct: 251  SNLTTICIKELDSLKLQSERMLRASLCDFKDSQKK--LKSLWRLHE--------NII--- 297

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVK-----FQESYLSKVVSLLQCE 644
                + L ELG + A + A++FL+    D+    ++D+      F   YL+   S+L   
Sbjct: 298  ----FCLQELGSFGALQAARTFLS-FDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRN 352

Query: 645  LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
              +G+                  G+ ++E+ E                      +   + 
Sbjct: 353  KTDGS----------------HAGSFDLEKLE----------------------EPFFSN 374

Query: 705  KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQE 763
            K   LI +L +Y   E+ + I+FV+R+  A  +  +   L  L F K   L+G H+ S+ 
Sbjct: 375  KFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKN 434

Query: 764  MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            M   +M   + +F  G V LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR 
Sbjct: 435  MSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARM 494

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
              S Y++++ER N SH   L      E  + +E   RT              D +   +Y
Sbjct: 495  TKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMF---------DCLEENIY 545

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            QV++TGA +S   +V L+H YC  LP D +    P F         G     C+L LP N
Sbjct: 546  QVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFY-----IDGIEGIICRLILPPN 600

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEP 1003
            A F + +G  C S   A++  CL AC KLH++GA TD LLP  GS + +  V  N     
Sbjct: 601  AAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNK 660

Query: 1004 LPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQV 1063
            +   +   E +   +  +L+         G     L +L  Y VK +   I +D    + 
Sbjct: 661  VEDDSLREELHEMLIPAVLKP-------SGLKLDSLSNLHFYYVKFI--PIPED---RRY 708

Query: 1064 SDFAVLFSSELDAELASLK-----NFHVRLMSIVLDVDVEPYTTPWDP----------AK 1108
              F +   + L  E  +L+      F    + I+LD     +T+P             + 
Sbjct: 709  QMFGLFVINPLPVEAETLQMMLAHKFQEMCLKILLDRS--EFTSPHVKLGNDVTLEINST 766

Query: 1109 AYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPL 1145
             YL +P +  K       +DW  VE+   +  + +P+
Sbjct: 767  FYLLLP-IKQKCYGDRFMIDWPAVERCLSSPIFKDPI 802



 Score =  320 bits (821), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 226/651 (34%), Positives = 342/651 (52%), Gaps = 70/651 (10%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ I  E+ A
Sbjct: 794  SSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA 853

Query: 1261 ESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
             S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL  R    
Sbjct: 854  WS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRL--P 899

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESMLLAIQLKD 1376
            E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L+AI+LKD
Sbjct: 900  ETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKD 957

Query: 1377 KI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    E
Sbjct: 958  VMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDE 1017

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            GQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG  P              
Sbjct: 1018 GQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG-RPC------------- 1063

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
               K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LIG + VEG
Sbjct: 1064 ---KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLIGAFLVEG 1119

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            G  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KFK +GLL+
Sbjct: 1120 GFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLL 1179

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +A  H S       CYQRLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ 
Sbjct: 1180 QAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSL 1239

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAP 1721
            A  AV+  +H HL   S+ L   I  F          K++LEE   P            P
Sbjct: 1240 AYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CP 1286

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA-- 1779
            K LGDIVES  GA+ LDSG + + VW+V   LL P++T   +  +P+REL+E CQ     
Sbjct: 1287 KALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFE 1346

Query: 1780 EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVLK 1828
             GL       G     VEV I   + +  A N   K A+K AA+  L+ LK
Sbjct: 1347 LGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1397


>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
            distachyon]
          Length = 1402

 Score =  363 bits (931), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 256/749 (34%), Positives = 386/749 (51%), Gaps = 117/749 (15%)

Query: 294  EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKML 353
            EA ++ P+  AR YQL+ LE+A   NT+AFL TG+GKTLIAVLL+R+  + + R   +  
Sbjct: 17   EAPKEDPQTIARWYQLEALERALCGNTVAFLGTGSGKTLIAVLLLRAYAHRV-RSPARDF 75

Query: 354  AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
            AVFLVP V LV QQA VI   T   V  + G+M  D+WDA  W+R  D  +VLVMT QIL
Sbjct: 76   AVFLVPTVVLVDQQARVIEAHTDLRVDRFSGDMKVDYWDAPTWRRVVDDAEVLVMTPQIL 135

Query: 414  LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTAS 469
            LN L HS  +++ I LLI DECH A   HPY+ ++ EFYH    +  ++  P +FGMTAS
Sbjct: 136  LNNLIHSFFRLQDIALLIFDECHRAKGNHPYACILKEFYHAQLNSRPQDPLPRIFGMTAS 195

Query: 470  PVNLKGVSSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA---- 524
            PVN K +  Q D  +K I  LE+ L+S V T+ +   L +++   +  +V YD +     
Sbjct: 196  PVNTKNL--QPDTYLKRISQLENLLNSKVYTVDNESALSEYIQYATTRIVHYDDSIIPSN 253

Query: 525  ---SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
                + S   +LK+  + V +A             G+    AKE + +++          
Sbjct: 254  SYNHVMSCLNRLKEKHLEVLKA----------NLYGSSLKVAKERISRLH---------- 293

Query: 582  AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
                    R   Y   +LG W A K A+     +Q+             E +LS      
Sbjct: 294  --------RTFLYCTADLGIWLASKAAE-----VQSS-----------NEQFLS------ 323

Query: 642  QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
                  G   +KD +      GF+   + E+      +    S   H+   + A + DG 
Sbjct: 324  ----FWGEQIEKDVE------GFIRNYSEEVYR----ELSCCSKTGHIGEDLEANLQDGL 369

Query: 702  VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG---- 757
            +T KV  L++ LL+Y+H +D R I+FVERV+ ++VL  + + +  +S      + G    
Sbjct: 370  LTRKVHCLVQTLLEYRHKQDLRCIVFVERVITSVVLKSLLSTITQMSGWIVKYMTGGISG 429

Query: 758  -HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
             H+ S++ RT    E +  FR G V L+VAT V EEGLD+  CN+VIRFD   TV ++IQ
Sbjct: 430  LHSQSRKERT----EILDSFRRGEVHLIVATQVLEEGLDVPSCNLVIRFDPPATVRSFIQ 485

Query: 817  SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            SRGRAR   SDY+L++ RG+ +  +       S + +R+E++           + L   D
Sbjct: 486  SRGRARMQNSDYVLLVRRGDAAALSKTEKYLASGQLMREESLRLASTMCQPLENPLCEED 545

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
                  Y+VESTGA V++N+++ LI+ +CS+LPSD Y    P F + +          +C
Sbjct: 546  -----YYRVESTGATVTINTSISLIYLFCSKLPSDEYFKPLPRFSINK-------ASCTC 593

Query: 937  KLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEK 994
             L LP ++P + +  EG V     + ++ VCL AC++LH +GA TD LLP+ G   ++E 
Sbjct: 594  TLYLPKSSPVQTVSTEGEV----DVLKKEVCLKACRELHAIGALTDSLLPELGFPCEEEP 649

Query: 995  ---VDQNDEGEPLPGTARHREFYPEGVAD 1020
               V++    +P         ++PE + D
Sbjct: 650  DIVVEKYQHEQP--------AYFPEELVD 670



 Score =  323 bits (829), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 320/612 (52%), Gaps = 65/612 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L   I+   H+  R Y  +   ++ A+S    ++G +      +Y  Y+K ++G+ L  +
Sbjct: 828  LRNSIICTPHNS-RLYAITGFLDLNAKSLLHLRDGSI-----LTYITYFKTRHGLRLTNE 881

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+    +   +N L  R         + E++   ++ V LPPELC   + P+P  ++
Sbjct: 882  NQPLLAASKLGQVRNFLHKR-------NYKNEKVSSSSFAVELPPELCRVVMSPVPADIL 934

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PS+M R+  MLL+ +LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 935  YSFSIIPSVMYRIHGMLLSAKLKVQLGPRMQQFSVPDLKILEALTTKECQEEFSQESLET 994

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V ++ L+ KY   HEG LT+M++ ++SN  L Q A +  L  YIQ + F P 
Sbjct: 995  LGDSFLKYVTTQHLYTKYKLHHEGTLTKMKKNLISNAALCQLACNNNLVGYIQGEVFNPK 1054

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W  PG+      DT    S         +  K+                          
Sbjct: 1055 GWFIPGL----GYDTCGNKSFCLSSNGMYSLRKIS------------------------- 1085

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA   +  +G+ +     E+         PE   
Sbjct: 1086 --IKSKRIADTVEALIGAYLSAAGEQAAFLFINSLGMDIGFH-SEIPIERNIVIKPEEF- 1141

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              ++  +LE  L   FKD  LL+EA+TH S   +G  +CYQRLEF+GDAVLDHL+T + +
Sbjct: 1142 --INIRSLEIILGYNFKDPLLLIEALTHGSYQIAGPTACYQRLEFLGDAVLDHLVTVYYY 1199

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
             +Y    P  LTDLR+A+VNN  +A  +VK  L+ H+ H S+ L R++  +++   +   
Sbjct: 1200 NTYPECTPALLTDLRSASVNNNCYAHASVKAGLNKHILHSSTELHRKMAYYLENFGQAFT 1259

Query: 1707 KP--GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLP 1764
             P  G+ + G+G    PKVLGD++ESIAGAI+LDS  D  +VW+  +PLL+P+ TPET+ 
Sbjct: 1260 GPSHGWEA-GIG---LPKVLGDVIESIAGAIYLDSKYDKEMVWRSMKPLLEPLATPETVE 1315

Query: 1765 MHPVRELQERCQQQAEGLEYKASRSGNLATV--EVYIDGVQVGVAQNPQ-KKMAQKLAAR 1821
              PV+ELQE C +++    Y  +  G +++V  EV ++G      ++ + K +AQKLA +
Sbjct: 1316 RDPVKELQEFCDRRSYSRSYTKTHEGGVSSVVAEVQVEGTIYSATRSGRDKTVAQKLAVK 1375

Query: 1822 NALAVLKEKETA 1833
            + L  LK    A
Sbjct: 1376 SLLEDLKAAAAA 1387


>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
          Length = 1631

 Score =  362 bits (928), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 251/740 (33%), Positives = 369/740 (49%), Gaps = 87/740 (11%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            +  + K P   AR YQLD+ ++A ++N I +L TG GKT IAVLLI  +   L R+  + 
Sbjct: 19   TRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL-GHLIRKPSRE 77

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
            + +FL P +PLV QQA VI   T + V  Y G  G++  D Q W+ +    +VLVMT QI
Sbjct: 78   VCIFLAPTIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQI 136

Query: 413  LLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            LL  LRH  IKM +I LLILDECHHA   K+HPY+ +M EFY++ S EK P VFGMTASP
Sbjct: 137  LLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASP 196

Query: 471  VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
            +  KG S++++    I +LE  L + VC++ D +ELE  V  P   V  Y         H
Sbjct: 197  IIGKGGSNKLNYTKCINSLEELLHAKVCSV-DNEELESVVASPDMEVYFYGPVN-----H 250

Query: 531  EQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
              L  + +  ++     S R  +      +D+  K  L+ ++ + E        N+I   
Sbjct: 251  SNLTTICIKELDSLKLQSERMLRASLCDFKDSQKK--LKSLWRLHE--------NII--- 297

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVK-----FQESYLSKVVSLLQCE 644
                + L ELG + A + A++FL+    D+    ++D+      F   YL+   S+L   
Sbjct: 298  ----FCLQELGSFGALQAARTFLS-FDGDKLDRREVDLNGSTSSFAHHYLNGATSILSRN 352

Query: 645  LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
              +G+                  G+ ++E+ E                      +   + 
Sbjct: 353  KTDGS----------------HAGSFDLEKLE----------------------EPFFSN 374

Query: 705  KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQE 763
            K   LI +L +Y   E+ + I+FV+R+  A  +  +   L  L F K   L+G H+ S+ 
Sbjct: 375  KFSVLINVLSRYGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKN 434

Query: 764  MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            M   +M   + +F  G V LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR 
Sbjct: 435  MSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARM 494

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
              S Y++++ER N SH   L      E  + +E   RT              D +   +Y
Sbjct: 495  TKSKYVVLLERENQSHEKLLNGYIAGESIMNEEIDSRTSNDMF---------DCLEENIY 545

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            QV++TGA +S   +V L+H YC  LP D +    P F         G     C+L LP N
Sbjct: 546  QVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFY-----IDGIEGIICRLILPPN 600

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEP 1003
            A F + +G  C S   A++  CL AC KLH++GA TD LLP  GS + +  V  N     
Sbjct: 601  AAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNK 660

Query: 1004 LPGTARHREFYPEGVADILQ 1023
            +   +   E +   +  +L+
Sbjct: 661  VEDDSLREELHEMLIPAVLK 680



 Score =  321 bits (822), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 226/651 (34%), Positives = 342/651 (52%), Gaps = 70/651 (10%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ I  E+ A
Sbjct: 821  SSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA 880

Query: 1261 ESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
             S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL  R    
Sbjct: 881  WS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRL--P 926

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESMLLAIQLKD 1376
            E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L+AI+LKD
Sbjct: 927  ETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKD 984

Query: 1377 KI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    E
Sbjct: 985  VMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDE 1044

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            GQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG  P              
Sbjct: 1045 GQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG-RPC------------- 1090

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
               K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LIG + VEG
Sbjct: 1091 ---KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLIGAFLVEG 1146

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            G  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KFK +GLL+
Sbjct: 1147 GFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLL 1206

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +A  H S       CYQRLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ 
Sbjct: 1207 QAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSL 1266

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAP 1721
            A  AV+  +H HL   S+ L   I  F          K++LEE   P            P
Sbjct: 1267 AYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CP 1313

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA-- 1779
            K LGDIVES  GA+ LDSG + + VW+V   LL P++T   +  +P+REL+E CQ     
Sbjct: 1314 KALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFE 1373

Query: 1780 EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVLK 1828
             GL       G     VEV I   + +  A N   K A+K AA+  L+ LK
Sbjct: 1374 LGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1424


>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  359 bits (921), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 241/689 (34%), Positives = 354/689 (51%), Gaps = 85/689 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL+ L +A  +NTI +LETG+GKTLIA++L+RS  + L R+    +AVFLVP+V L
Sbjct: 61  ARSYQLEALYKAIHENTIVYLETGSGKTLIAIMLLRSYAHQL-RKPSPYIAVFLVPQVVL 119

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAE ++  T   VG Y G+MG DFWDA  W++E +  +VLVMT  ILL+ LRHS  K
Sbjct: 120 VSQQAEAVKRHTDLKVGMYWGDMGVDFWDAATWKQEMEKHEVLVMTPAILLSCLRHSFFK 179

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK---EKRPSVFGMTASPVNLKGVSSQV 480
           +  IN+LI+DECHHA  KHPY+ +M+EFYH   K      P +FGMTASP+  K   S+ 
Sbjct: 180 LNMINVLIMDECHHARGKHPYACIMTEFYHHQLKSGISDLPRIFGMTASPIKSKVGKSES 239

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
             +  I  L   + S V T      + + +P  +     Y      + L E+L      +
Sbjct: 240 SWSENIQKLMILMHSKVYTCVSEAVITEFIPTSTPKFKFYSNNGIQFVLFEELASKLKML 299

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           +E  + + R S   F  +    A++ + +++                   ++ + L ELG
Sbjct: 300 KEQHELTLRSS--DFTKSIAESAQKRITKIFC------------------SLMFCLDELG 339

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            W A K A+S    L ++E  ++                              D  V D 
Sbjct: 340 VWLALKAAES----LSSNEIESFSWG------------------------HSGDRVVKD- 370

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
              F+  G + ++     D     G       I + V  G +T KV  L+  LL+Y+   
Sbjct: 371 ---FILEGVHALKSYLQCDPQWSIGDN-----IKSDVKMGLLTSKVCCLVDSLLEYRGLT 422

Query: 721 DFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHN-NSQEMRTFQMQETIAKFRD 778
           D R IIFVER++ A+VL  +    LP  +  K+  + G+N   Q     +  E + +FR 
Sbjct: 423 DMRCIIFVERIITAIVLEDLLNTLLPKYNSWKTKFIAGYNFGLQNQSRTKQNEIVNEFRM 482

Query: 779 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
           G V ++VATS+ EEGLD+++CN+VIRFD   TV ++IQSRGRAR   SDYILM++ G+  
Sbjct: 483 GLVNIIVATSILEEGLDVQRCNLVIRFDPCPTVCSFIQSRGRARMRNSDYILMVKSGDSV 542

Query: 839 HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
             + L     S + +RKE++  + L            D      Y V STGA+ +L+S++
Sbjct: 543 TCSRLEKYLASADIMRKESLRHSSLP-----CDPFEGDEFDKEAYHVSSTGAIANLSSSI 597

Query: 899 GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVC--SS 956
            LI+ YCS+LP+D Y    P     R +K  G       L LP + P +    P+C   +
Sbjct: 598 SLIYLYCSRLPADGYFKPAP-----RWDKETG------TLYLPKSCPLQ----PICVEGN 642

Query: 957 MRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
            +  +   CL ACK+LH++GA TD L+PD
Sbjct: 643 KKHLKNIACLEACKQLHKIGALTDNLVPD 671



 Score =  331 bits (848), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 224/611 (36%), Positives = 324/611 (53%), Gaps = 68/611 (11%)

Query: 1235 LEGRIVTAAHSGKR--FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELI 1292
            L+  +V  +H G +  FY+ +   E+   S    + G     E ++Y  YY+Q +G++L 
Sbjct: 861  LQDALVCTSHPGGKIYFYITTGIMELHGNSPMELRGG-----EVTTYKKYYEQHHGIQLQ 915

Query: 1293 FKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI--HPLPGS 1350
            F+ Q L++ R     KN     + H ++Q  +GE       +V LPPELC I   P+  S
Sbjct: 916  FENQWLLKARHHFKVKN-----YCHGQKQGKDGEA---SKAFVELPPELCSIVMSPIKDS 967

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDK-----INYPVPASKILEALTAASCQETFCYERA 1405
            ++     +PSIM R+ES+L A  LK           +   K+LEA+T   C E F YE  
Sbjct: 968  IIYTFSFIPSIMHRLESLLGAFNLKKMHLDHCTQNEIQTIKVLEAITTKRCNEAFHYESL 1027

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            E LGD++LK+  S+ LF  Y   HEG L+  R++++SN  L +   S GL  +I+ + F 
Sbjct: 1028 ETLGDSFLKYAASQQLFKTYKNHHEGLLSVKREKIISNAALCKLGCSSGLPGFIRNEPFD 1087

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
            P  W  PG          D   SL  +E  +   K+                        
Sbjct: 1088 PHAWTIPG----------DKPESLKLEELVIKGKKIYVHGK------------------- 1118

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES 1585
              R L+ K +ADVVEALIG +   GG+ +A   M W+GI+V  D  ++         PE 
Sbjct: 1119 --RKLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGIKVSFD--KIPYERHFDIQPEK 1174

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
            +L +V F  LE  LK  F D  LLVEA+TH S     V  CYQRLEF+GD+VLD+LIT H
Sbjct: 1175 LL-NVRF--LESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWH 1231

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
            L+  Y  + PG+LTD+RAA+VNN+ +A  A+KH LH H+ H S  L + I   +    ++
Sbjct: 1232 LYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVTLNN-FDK 1290

Query: 1705 LLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
            L     ++FG   +   PKVLGDI+ES+AGAI +DSG +  VVWQ  +PLL+P+VTPETL
Sbjct: 1291 L--SSSSTFGYESEASPPKVLGDIIESLAGAILVDSGFNKEVVWQSIRPLLEPLVTPETL 1348

Query: 1764 PMHPVRELQERCQQQAEGLEYK-ASRSGNLAT--VEVYIDGV--QVGVAQNPQKKMAQKL 1818
             +HP+REL E CQ+++  +  +  SR   +    ++V  DGV  +        +  A+K+
Sbjct: 1349 KLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHEYEYTGPALRDTAKKI 1408

Query: 1819 AARNALAVLKE 1829
            A +  L  LKE
Sbjct: 1409 ACKEILNSLKE 1419


>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  358 bits (918), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 253/726 (34%), Positives = 386/726 (53%), Gaps = 90/726 (12%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L+R   + L R+    +AVFLVP
Sbjct: 20   PLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAH-LLRKPSPFIAVFLVP 78

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            KV LV QQAE ++  T   VG Y G+MG DFWDA  W++E D  +VLVMT  ILLN LRH
Sbjct: 79   KVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQDKHEVLVMTPAILLNGLRH 138

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTASPVNLKGV 476
            S  K++ I +LI DECHHA  K PY+ +M EFYH    ++    P +FGMTASP+  KGV
Sbjct: 139  SFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHEQVRSNNSNLPRIFGMTASPIKTKGV 198

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY-DK---AASLWSLHEQ 532
            +  +  +  +  LE+ ++S + T      L + VP  +  +  Y DK   +A   ++  Q
Sbjct: 199  NDLMH-SKNMIELENLMNSKIYTSVSEAVLAEFVPFSTPKLTHYKDKDIPSALFENVAHQ 257

Query: 533  LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
            L+ ++   E + +S         M +    A++++ +++                   A 
Sbjct: 258  LEILKNKYEHSLES------LNLMESTKESARKKISKLFS------------------AF 293

Query: 593  NYALGELGQWCAYKVAQ-SFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             + L +LG W A K A+ SF   +  D     QLD+  +E              +    +
Sbjct: 294  LFCLNDLGLWLALKAAEFSFCDDM--DICCWGQLDLSGEE--------------IIKNFN 337

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
            K   KV+ +          E+  G+ L+               A    G +T KV  L+ 
Sbjct: 338  KDAYKVIST----YLPSDRELSVGDDLE---------------ADAESGFLTTKVICLVG 378

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ-EMRTFQMQ 770
             LL+Y+H ++ R I+FVERV+ A+VL K+ ++L        A  I  N SQ + ++ ++Q
Sbjct: 379  SLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIAGNASQLQSQSRRVQ 438

Query: 771  ETIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
              +  +FR G V ++V+TS+ EEGLD++ CN+VIRFD + TV ++IQSRGRAR   SDY+
Sbjct: 439  NALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFIQSRGRARMQNSDYL 498

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
            LM++ G+    + LR   +S + +R+E++    L      S L   +      Y VEST 
Sbjct: 499  LMVKSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDEE-----FYWVESTR 553

Query: 890  AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
            A+V+L+S++GL++FYCS+LPSD Y   +P      ++  G     +C +  P + P + +
Sbjct: 554  AIVTLSSSIGLLYFYCSRLPSDGY--FKPTPRCSINQDMG-----TCTIYHPKSCPIQTV 606

Query: 950  EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTAR 1009
               V  +++  +Q  CL ACK+LH+ GA TD L+P     E     D+N     +P    
Sbjct: 607  S--VRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQDEN-----MPYDDE 659

Query: 1010 HREFYP 1015
               +YP
Sbjct: 660  QATYYP 665



 Score =  331 bits (848), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 224/606 (36%), Positives = 330/606 (54%), Gaps = 62/606 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+ + + +  I  E+   S    K G L      +Y +YY+ ++G+EL F 
Sbjct: 833  LKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGL-----LTYKEYYRLRHGIELQFD 887

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             + L++GR +   +N L  R    +E+E      L  T  V LPPELC  F+ P+  S++
Sbjct: 888  GEKLLKGRRMFVVQNYLQ-RCRQQKEKE------LSNTT-VELPPELCVIFMSPISISII 939

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKD-KINY----PVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R+ES+LLA+ LK+  +NY     +P  K+LEA+T   CQE F  E  E 
Sbjct: 940  YSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLET 999

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+  S+ LF  +   HEG L+  +++++SN  L +    + L  +I+ + F P 
Sbjct: 1000 LGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPK 1059

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
            +W   G             S +F +E   +  K+                       S  
Sbjct: 1060 KWIIAG---------DQSRSHVFGEELLSSTRKIYV---------------------SER 1089

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
            R L SK +ADVVEALIG +   GG+ AA   M+W+GI V+     V  P +    P  + 
Sbjct: 1090 RKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDF----VKVPYKRD-FPVILK 1144

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
            R V+   LE  L   F+D  LLVEA+TH S     +  CYQRLEF+GDAVLD+L+T HL+
Sbjct: 1145 RHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLY 1204

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y  + PG LTDLR+A+VNN+ +A+ AVK KLH H+ H S  L R I   V    ++L 
Sbjct: 1205 HKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGN-FDKL- 1262

Query: 1707 KPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P  ++FG   +   PKVLGD++ES+AGAI +DS  +  VV+Q  +PLL+P++TPET+ +
Sbjct: 1263 -PVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKL 1321

Query: 1766 HPVRELQERCQQQAEGLE-YKASRSGNLA-TVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            HP REL E CQ++   ++    S++G  + T+EV  +G +        K+ A KLA++  
Sbjct: 1322 HPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHKHTSTSDKRTATKLASKEV 1381

Query: 1824 LAVLKE 1829
            L  LKE
Sbjct: 1382 LKSLKE 1387


>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
           distachyon]
          Length = 1627

 Score =  355 bits (911), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 250/706 (35%), Positives = 362/706 (51%), Gaps = 90/706 (12%)

Query: 293 SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
           S  + K P   AR YQLD+ ++A ++N + +L TG GKT IAVLLI  +   L R+    
Sbjct: 10  STEEPKDPRTIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLIYEL-GHLIRKPSSD 68

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
           + +FL P +PLV QQA VI   T + V  Y G  G+   D Q W++E    +VLVMT QI
Sbjct: 69  VCIFLAPTIPLVRQQAAVISNSTNFKVQSYYGN-GKSSRDHQDWEKEMRESEVLVMTPQI 127

Query: 413 LLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
           LL  LRH  I+M +I LLI DECHHA   K+HPY+ +M EFY + +  K P VFGMTASP
Sbjct: 128 LLYNLRHCFIRMSSIALLIFDECHHAQAHKRHPYAQIMKEFYDSNAV-KPPRVFGMTASP 186

Query: 471 VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
           V  KG S++++    I +LE  L + VC++ D  ELE  +  P   V  Y   +      
Sbjct: 187 VMGKGGSNKLNYTKCINSLEELLHAKVCSV-DNVELESVIAFPDMEVYPYGPVSHSNLTV 245

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAK-EELRQVYGVSERTESDGAANLIQKL 589
             +K+++  ++  ++   R S + F   +D+  K + L +++G           NLI   
Sbjct: 246 TYIKELD-DLKLQSECIVRESLYDF---KDSQKKLKSLWRLHG-----------NLI--- 287

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDV-----KFQESYLSKVVSLLQCE 644
               + L ELG + A + A++ L+    D     ++D+     +F   YL+K VS+L C 
Sbjct: 288 ----FCLQELGSFGALQAARNLLS-FDVDAFDKKEVDINGNSTRFMHHYLNKAVSVLSCN 342

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
           +++G            ++ F         + E+L+  + S                    
Sbjct: 343 ILDGT----------HDDSF---------DLEMLEEPLFSN------------------- 364

Query: 705 KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQE 763
           K   LI +L +Y+  E+ + IIFV+R+  A  +  +   L  L F K   L+G H+  + 
Sbjct: 365 KFAVLINVLSRYRLEENMKCIIFVKRIAVARAISHIIRNLKCLDFWKCEFLVGCHSGLKN 424

Query: 764 MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
           M   +M + + KF  G V LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR 
Sbjct: 425 MSRNKMDDIVEKFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARM 484

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
             S Y++++ERGN S    L N    E  + +E   RT              D +    Y
Sbjct: 485 TISKYVVLLERGNQSQEKLLNNYIAGESIMNEEIDSRTSNDMF---------DYLEENTY 535

Query: 884 QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE-YSCKLQLPC 942
           +V  TGA +S   +V L+H YC  LPSD +    P F           TE   C++ LP 
Sbjct: 536 RVNHTGASISTACSVSLLHRYCYNLPSDMFFNPSPAFFY------IDDTEGIICRVILPP 589

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
           NA F +++G  C S   A++  CL AC K HE+GA TD LLP  GS
Sbjct: 590 NAAFRQMDGQPCQSKDEAKRDACLKACMKFHELGALTDFLLPGPGS 635



 Score =  311 bits (796), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 209/641 (32%), Positives = 343/641 (53%), Gaps = 50/641 (7%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H + +P   L + D   +  D+ G ++   H+   F ++ I  ++  
Sbjct: 811  SSPVFRDPVDVSVHGSYIPNESLRLLDEVYSRTDVVGSLIFVPHNNTFFIIDVILDKLNG 870

Query: 1261 ESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEE 1320
             S F            ++Y ++Y++++G+EL   +QPL++ + +    NLL  R    E 
Sbjct: 871  RSEF----------NGATYEEHYRERFGIELSHPEQPLLKAKQLFNLHNLLHDRLR--ET 918

Query: 1321 QEGEGEEILDKTYYVFLPPELCF--IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
             +  G E+++  ++V LPPELC   I      +      LPS+M R+E+ L+AI+LKD +
Sbjct: 919  TDSRGSELVE--HFVELPPELCSLKITGFSKDMSSSLSLLPSLMCRLENFLVAIELKDLM 976

Query: 1379 --NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
              ++P    + AS ILEA+T   C E    ER E+LGDA+LK+VV R  F+ Y    EGQ
Sbjct: 977  LSSFPEASQISASAILEAITTERCLERISLERFEVLGDAFLKYVVGRHNFMSYEGLDEGQ 1036

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTR R  +V+N  L++ ++ + LQ YI+  +F P+++ A G  P                
Sbjct: 1037 LTRRRSDIVNNSNLHELSVKRNLQVYIRDQQFEPTQFFALG-RPC--------------- 1080

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
             K V    +    +    + D  E+  +   + S+  L  KT+ADVVE+L+G + VEGG 
Sbjct: 1081 -KVVCHADMEVSIHQKNIDPDRPENCNVRC-TKSHHWLHKKTIADVVESLLGAFLVEGGF 1138

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
             AA   + W+GI V+ +   +      + +  S++  ++   LE+ +  KFK +GL++EA
Sbjct: 1139 KAAFAFLHWVGIDVDFEDSALYRVLNASSINLSLMNLINVAELEELIGYKFKHKGLIIEA 1198

Query: 1613 ITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFAR 1672
              H S       CYQ+LEF+GDAVL++L+T +L+ +Y +L PG +TDL++ AV N++FA 
Sbjct: 1199 FVHPSFNKHSGGCYQKLEFLGDAVLEYLMTSYLYSAYPDLKPGEITDLKSLAVCNDSFAY 1258

Query: 1673 VAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK-PGFNSFGLGDCKAPKVLGDIVESI 1731
            VA++  +H ++   S+ L + +  F     E  +K P      + +   PKVLGDIVES 
Sbjct: 1259 VAIQKCIHKYIIKDSNHLTKAVSKF-----ENYIKLPNSEKDLVEEPACPKVLGDIVESC 1313

Query: 1732 AGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQ--QQAEGLEYKASRS 1789
              A+ LDSG + + VW++   LL P+++   + M+P+RE++E CQ  +   GL       
Sbjct: 1314 VAAVLLDSGFNLNYVWKLVLMLLKPVLSFSGMHMNPMREIRELCQCNELELGLPKPMKAD 1373

Query: 1790 GNL-ATVEVYIDGVQVG-VAQNPQKKMAQKLAARNALAVLK 1828
            G     VEV I+   +   A N   K+A+KLAAR  L+ LK
Sbjct: 1374 GEYHVKVEVNINSTMISCTAANRNSKVARKLAARETLSKLK 1414


>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
 gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
          Length = 1418

 Score =  352 bits (902), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 237/697 (34%), Positives = 358/697 (51%), Gaps = 103/697 (14%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL+ LE+A ++NTI +LETG+GKTLIA++L+RS    L R+    +AVFLVPKV L
Sbjct: 63  ARSYQLEALEKAIRENTIVYLETGSGKTLIAIMLLRSYAYHL-RKPSPYIAVFLVPKVVL 121

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAE +R  T   +G Y G+MG D+WD   W+ E +  +VLVMT  ILL+ LRHS IK
Sbjct: 122 VSQQAEALRNHTDLKIGMYWGDMGVDYWDGDVWKGEMEKHEVLVMTPAILLSCLRHSFIK 181

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE---KRPSVFGMTASPVNLKGVSSQV 480
           +  I +LI+DECHHA  +HPY+ +M+EFYH   +    + P +FGMTASP+  K  +S+ 
Sbjct: 182 LSMIKVLIMDECHHAAGRHPYACIMTEFYHHQLRSGITELPRIFGMTASPIKSKAANSES 241

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
             +  I  L + + S V T      + + +P  +     Y      ++L E+L +     
Sbjct: 242 TLSKSIRELMTLMHSKVYTCVCDAVISQFIPTSTPKFRFYRDNGISYTLFEELAK----- 296

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTES---DGAANLIQKLRAINYALG 597
                             R    K++  +    S+ T+S        + +   A  + L 
Sbjct: 297 ------------------RLNELKQQHERCITSSDLTKSAVQSAHKKIARIFDASIFCLE 338

Query: 598 ELGQWCAYKVAQS--------FLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
           ELG W A K A+S        FL  +  D     Q+  KF  + +  + S +        
Sbjct: 339 ELGIWLALKAAESLSSIEIETFLWGISGD-----QIVKKFSSATMMTLQSCIP------- 386

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
            S     + D+ N  +E G                                 +T KV  L
Sbjct: 387 -SDPRWTIADNMNSNLEMGL--------------------------------LTSKVCCL 413

Query: 710 IKILLKYQHTEDFRAIIFVERVVAALVLPKVF-AELPSLSFVKSASLIGHNNSQEMRTFQ 768
           I+ LL+Y+   + R I+FVERV+AA+VL  +  A LP  +  ++  + G  +  + +T +
Sbjct: 414 IECLLEYRGLTEMRCIVFVERVIAAIVLEVLLNALLPKYNSWRAKFIAGTGSKLQNQTRK 473

Query: 769 MQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           +Q E + +FR G V ++VATS+ EEGLD++ CN+VIRFD + TV +++QSRGRAR   SD
Sbjct: 474 IQNEIVEEFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMRNSD 533

Query: 828 YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
           YILM++ G+    + L    +  + +RKE++  + L         +  D      Y+V S
Sbjct: 534 YILMVKSGDAVTRSRLEKYLDGGQMMRKESLRYSSLP-----CESLESDRFNEQAYRVAS 588

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           T AVV+L+S + LI+ YCS+LPSD Y   +P  + ++H+           L LP + P  
Sbjct: 589 TEAVVNLSSGITLIYLYCSRLPSDGY--FKPTPMWDKHKG---------ILYLPKSCPIH 637

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            +   V    +  +   CL ACK+LH++GA TD L+P
Sbjct: 638 AIH--VQGDNKFLKNIACLEACKQLHKIGALTDNLVP 672



 Score =  347 bits (890), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 243/652 (37%), Positives = 343/652 (52%), Gaps = 80/652 (12%)

Query: 1197 DVVKASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRY 1256
            D +  S + P +   + H A++ T K       A    L   ++   H+G R Y+ +   
Sbjct: 829  DWLTISSIHPSKIQCRYHAANILTEK-----GFACGCILRNALICTPHNG-RTYITAGMM 882

Query: 1257 EMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFE 1316
            E+   S     +G     E ++Y  Y+ QK+G++L F+ Q L++ R V   KN     + 
Sbjct: 883  ELDGNSPLEVGDG-----EVTTYKKYFGQKHGIQLRFEHQRLLKARHVFPVKN-----YC 932

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFI--HPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            H   Q  +    + KT+ V LPPELC I   P+P S +     +PSIM R+ES+L A   
Sbjct: 933  HGYSQAKDRGLNVSKTF-VELPPELCSIIMSPVPLSTLYTFSFIPSIMHRLESLLGAYNF 991

Query: 1375 KD-KINY----PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            K   ++Y     +   K+LEA+T  SC+ETF YE  E LGD++LK+ VS+ LF  Y   H
Sbjct: 992  KRMHLDYCPQNKIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYAVSQQLFNMYQNHH 1051

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            EG L+  R++++ N  L +      L  +I+ D F P  W  PGV            S  
Sbjct: 1052 EGLLSVKREKIICNAALSKLGCDFRLPGFIRNDPFDPKTWIIPGV-----------KSES 1100

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            F  E++V   +    K Y              GD    R L  K +ADVVEALIG +   
Sbjct: 1101 FKLEETVFNGR----KIYT------------RGD----RKLKRKVVADVVEALIGAFLSA 1140

Query: 1550 GGKDAANHLMKWIGIQVESD--PEE---VGCPSRPACVPESVLRSVDFHALEDALKIKFK 1604
            GG+ AA   M WIGI+V  +  P E   + CP          L +V F  LE  LK  F+
Sbjct: 1141 GGEMAALLFMDWIGIKVNFNIIPYERQFIACPDN--------LVNVRF--LESLLKYSFR 1190

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            DR LLVEA+TH S     V  CYQRLE++GD+VLD+LIT HL+  Y  + PG+LTD+R+A
Sbjct: 1191 DRSLLVEALTHGSYMLPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSA 1250

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGL-GDCKAPK 1722
            +VNN+ +A  A+K +LH H+ H S  L + I       L++      +SFG   +   PK
Sbjct: 1251 SVNNDCYAMSAIKVQLHKHVLHASQELHKHI----VATLDKFDDQSSSSFGWESEATFPK 1306

Query: 1723 VLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGL 1782
            VLGDI+ES+AGAIF+DSG D   VW+  +PLL+P+VTP+TL +HP+REL E CQ+     
Sbjct: 1307 VLGDIIESLAGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQKMNYTK 1366

Query: 1783 EYKASRSGNLAT--VEVYIDGV--QVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            E   SR+  + +  +EV  DGV  Q     +  KK A +LA +  L  L+ K
Sbjct: 1367 EKTLSRNDGVTSCKIEVIADGVIHQFEYKGSTDKKTATRLACKGVLHSLQWK 1418


>gi|357129053|ref|XP_003566182.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
            distachyon]
          Length = 1806

 Score =  351 bits (900), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 266/783 (33%), Positives = 384/783 (49%), Gaps = 101/783 (12%)

Query: 1211 MQIHNADMPTGKLM-MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEG 1269
            + I + D   G L+ +A++   A  L    V A H+GK  Y      ++++ S+F   +G
Sbjct: 1049 LAILDIDQNDGDLIHLANTSCEAHVLRNVAVLAVHTGK-IYTSLHVTDLSSNSTF---DG 1104

Query: 1270 YLGPLE--YSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEE 1327
                 E  + ++ +Y+++KYG+ L    QPL+  +      NLLS +         EG  
Sbjct: 1105 VSDKKETGFKTFKEYFEKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKIRD------EGPY 1158

Query: 1328 ILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK- 1386
            ++     V +PPEL     LP  ++R     PS+M R+E+++LA QL+ ++ Y    S  
Sbjct: 1159 VIKVNNRVHMPPELLIPLNLPEDILRAFYLFPSLMYRMETLMLASQLRSEVAYDSNISSF 1218

Query: 1387 -ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
             ILEA+T   C E F  ER ELLGD+ LK+ VS  LFLK+P KHEGQL+  R  ++SN  
Sbjct: 1219 LILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPNKHEGQLSSSRTDIISNAA 1278

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVL---------PVFDEDTKDGDSSLFDQEKSV 1496
            LY+  +   +Q YI+   F P RW APG L         PV D +    D  + D + ++
Sbjct: 1279 LYRLGIEHKIQGYIRDAAFDPRRWLAPGQLTNRPFHCKCPV-DSEVVTKDIHVIDDKPTI 1337

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
               K+G                  +     +R + SKT++D VEA+IG YYV GG  AA 
Sbjct: 1338 ---KIG------------------QACDKGHRWMCSKTISDCVEAIIGAYYVGGGLRAAV 1376

Query: 1557 HLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF-HALEDALKIKFKDRGLLVEAITH 1615
              ++W+G+  E + EE+   +  +   ++ L  +D   AL   L   F  +GLL+EA+TH
Sbjct: 1377 AFLRWLGVDAEIE-EELIMQTILSASMQTYLPKIDLTEALGAKLGYAFSVKGLLLEALTH 1435

Query: 1616 AS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA 1674
             S + S     YQRLEF+GDA LD L+T HLF S+ +   G LTDLR+A+VNNENFA+VA
Sbjct: 1436 PSHQESEERYSYQRLEFLGDAALDILLTWHLFNSHKDTDEGELTDLRSASVNNENFAKVA 1495

Query: 1675 VKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGA 1734
            VKHK H  L+H S  L  QI ++    LE       N       + PKVLGDIVESIAGA
Sbjct: 1496 VKHKFHHFLQHSSEILLDQITEYANS-LENSSMDEINLSSDAPLRGPKVLGDIVESIAGA 1554

Query: 1735 IFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNL-A 1793
            I +D+  D  VVW VF+PLL P+VTPE L + P REL E C +    L  K +    L A
Sbjct: 1555 ILIDTKLDLDVVWGVFKPLLSPIVTPENLELPPFRELLEWCNRNGYFLGIKCTDGEKLQA 1614

Query: 1794 TVEVYIDGVQV---GVAQNPQKKMAQKLAARNALAVLKEK-------------------- 1830
             ++V +  + V   G  +N  KK A+  AA   L  L+EK                    
Sbjct: 1615 ILDVQLKDMLVVRRGFGKN--KKDAKAHAASMLLKDLEEKGLIISKNAIRMEQFEKQWGS 1672

Query: 1831 ----------------ETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRC 1874
                              A  KE  D+        ++   R  L ++C +  WP P +  
Sbjct: 1673 ANHCHNMFDAVDTQVLTPARGKEPLDKPVHLAVKTSKGGPRIALYELCKKLQWPAPKFVS 1732

Query: 1875 VRE-----GGP---AHAKRFTYAVRVNT-TDKGWTDECVGEPMPSVKKAKDSAAVLLLEL 1925
            V+      GG    A  + F++A  +             G+     K ++DSAA+L+L  
Sbjct: 1733 VKTQPSAAGGSSMKATTQEFSFASNITLHVPNSDVISLRGDGFADKKSSQDSAALLMLHE 1792

Query: 1926 LNK 1928
            L +
Sbjct: 1793 LQR 1795



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 883 YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
           Y+V +TGA V+ +S+V +I  YC +LP D+Y   RP F    H        + CKL LP 
Sbjct: 632 YRVGTTGAKVTADSSVNVIVQYCDKLPKDKYHTRRPLFEFTDHGD-----GFVCKLTLPS 686

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +     L GP   S + A+Q VCL ACK+LH +GA  D L P
Sbjct: 687 SDVLPPLVGPKVRSKQKAKQLVCLDACKQLHLLGALDDCLCP 728


>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
            Full=Dicer-like protein 4; Short=OsDCL4; AltName:
            Full=Protein SHOOT ORGANIZATION 1
 gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
          Length = 1657

 Score =  350 bits (898), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 252/766 (32%), Positives = 370/766 (48%), Gaps = 113/766 (14%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            +  + K P   AR YQLD+ ++A ++N I +L TG GKT IAVLLI  +   L R+  + 
Sbjct: 19   TRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL-GHLIRKPSRE 77

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
            + +FL P +PLV QQA VI   T + V  Y G  G++  D Q W+ +    +VLVMT QI
Sbjct: 78   VCIFLAPTIPLVRQQAVVIASSTDFKVQCYYGN-GKNSRDHQEWENDMREFEVLVMTPQI 136

Query: 413  LLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            LL  LRH  IKM +I LLILDECHHA   K+HPY+ +M EFY++ S EK P VFGMTASP
Sbjct: 137  LLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNSNSVEKFPRVFGMTASP 196

Query: 471  VNLKGV--------------------------SSQVDCAIKICNLESKLDSVVCTIKDRK 504
            +  KGV                          S++++    I +LE  L + VC++ D +
Sbjct: 197  IIGKGVMPSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINSLEELLHAKVCSV-DNE 255

Query: 505  ELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGA 563
            ELE  V  P   V  Y         H  L  + +  ++     S R  +      +D+  
Sbjct: 256  ELESVVASPDMEVYFYGPVN-----HSNLTTICIKELDSLKLQSERMLRASLCDFKDSQK 310

Query: 564  KEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANY 623
            K  L+ ++ + E        N+I       + L ELG + A + A++FL+    D+    
Sbjct: 311  K--LKSLWRLHE--------NII-------FCLQELGSFGALQAARTFLS-FDGDKLDRR 352

Query: 624  QLDVK-----FQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELL 678
            ++D+      F   YL+   S+L     +G+                  G+ ++E+ E  
Sbjct: 353  EVDLNGSTSSFAHHYLNGATSILSRNKTDGS----------------HAGSFDLEKLE-- 394

Query: 679  DSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLP 738
                                +   + K   LI +L +Y   E+ + I+FV+R+  A  + 
Sbjct: 395  --------------------EPFFSNKFSVLINVLSRYGLQENMKCIVFVKRITVARAIS 434

Query: 739  KVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIR 797
             +   L  L F K   L+G H+ S+ M   +M   + +F  G V LLVATSV EEGLDI+
Sbjct: 435  NILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQRFSSGEVNLLVATSVGEEGLDIQ 494

Query: 798  QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEA 857
             C +V+RFDL +TV ++IQSRGRAR   S Y++++ER N SH   L      E  + +E 
Sbjct: 495  TCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLERENQSHEKLLNGYIAGESIMNEEI 554

Query: 858  IERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
              RT              D +   +YQV++TGA +S   +V L+H YC  LP D +    
Sbjct: 555  DSRTSNDMF---------DCLEENIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPS 605

Query: 918  PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
            P F         G     C+L LP NA F + +G  C S   A++  CL AC KLH++GA
Sbjct: 606  PVFFY-----IDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGA 660

Query: 978  FTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
             TD LLP  GS + +  V  N     +   +   E +   +  +L+
Sbjct: 661  LTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLK 706



 Score =  320 bits (821), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 226/651 (34%), Positives = 342/651 (52%), Gaps = 70/651 (10%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ I  E+ A
Sbjct: 847  SSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA 906

Query: 1261 ESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
             S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL  R    
Sbjct: 907  WS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRL--P 952

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESMLLAIQLKD 1376
            E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L+AI+LKD
Sbjct: 953  ETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKD 1010

Query: 1377 KI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    E
Sbjct: 1011 VMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDE 1070

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            GQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG  P              
Sbjct: 1071 GQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG-RPC------------- 1116

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
               K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LIG + VEG
Sbjct: 1117 ---KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLIGAFLVEG 1172

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            G  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KFK +GLL+
Sbjct: 1173 GFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLL 1232

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +A  H S       CYQRLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ 
Sbjct: 1233 QAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSL 1292

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAP 1721
            A  AV+  +H HL   S+ L   I  F          K++LEE   P            P
Sbjct: 1293 AYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CP 1339

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA-- 1779
            K LGDIVES  GA+ LDSG + + VW+V   LL P++T   +  +P+REL+E CQ     
Sbjct: 1340 KALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFE 1399

Query: 1780 EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVLK 1828
             GL       G     VEV I   + +  A N   K A+K AA+  L+ LK
Sbjct: 1400 LGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 1450


>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
          Length = 1839

 Score =  347 bits (891), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 245/655 (37%), Positives = 347/655 (52%), Gaps = 82/655 (12%)

Query: 1208 REAMQIHNADMPTGKLM-MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFP- 1265
            RE + I ++D   G L+ +A+    A  L+  +V A H+GK +    I  E++ +S+F  
Sbjct: 811  RELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDIT-ELSGDSAFDG 869

Query: 1266 ---RKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFE---HSE 1319
               +KE      ++ ++A+Y+K+KYG+ L    QPL+  +      NLLS +F    +  
Sbjct: 870  ASDKKE-----CKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVV 924

Query: 1320 EQEGEGEEILDKTY-YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            E    G  +++KT   V +PPEL     LP  ++R     P++M R+ES+ LA QL+ +I
Sbjct: 925  ENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLASQLRSEI 984

Query: 1379 NYP---VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
             Y    + +  ILEA+T   C E F  ER ELLGD+ LK+              EGQL+ 
Sbjct: 985  GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYA------------DEGQLSS 1032

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL---------PVFDEDTKDGD 1486
            +R  M+ N  LY+  + + +Q Y++   F P RW APG L         PV  E   D D
Sbjct: 1033 IRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPVKSEVVTD-D 1091

Query: 1487 SSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVY 1546
              + D +K++   K   DK +                    R + SKT+AD VEA+IG Y
Sbjct: 1092 IHIID-DKAIVLGK-ACDKGH--------------------RWMCSKTIADCVEAIIGAY 1129

Query: 1547 YVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            Y  GG  AA  ++KW+GI  E + + +      A V   + +   F  LE  L   F  +
Sbjct: 1130 YAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVK 1189

Query: 1607 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            GLLVEA+TH S+   G   CY+RLEF+GDAVLD L+T++LF S+ +   G LTDLR+A+V
Sbjct: 1190 GLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASV 1249

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-------ELLKPGFNSFGLGDC 1718
            NNENFA+VAVKH  H  L+H S  L  QI ++V   LE       ELL  G         
Sbjct: 1250 NNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNR-LEGSSMDKVELLSDGLP------- 1301

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQ 1778
            K PKVLGDIVESIAGAI LD+  D  VVW +F+PLL P+VTPE L + P REL E C + 
Sbjct: 1302 KGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKH 1361

Query: 1779 AEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
               +       G+  +AT++V +  V + V Q   KK     A  ++L +LK+ E
Sbjct: 1362 GYFVGINCRDQGDTVVATLDVQLKEVLL-VRQGFSKKRKDAKAHASSL-LLKDLE 1414



 Score =  262 bits (670), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 219/761 (28%), Positives = 333/761 (43%), Gaps = 146/761 (19%)

Query: 288  KVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR 347
            + GK+   K +  +   R YQLDV E A ++NTIA L+TGAGKT+IAV+LI+      + 
Sbjct: 20   EAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRT 79

Query: 348  QNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
            +N   + +FL P V LV QQ EVI   T + V  Y G  G D W         DT  V  
Sbjct: 80   KNAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYGAKGVDQWTGHG----HDTTGVPT 135

Query: 408  MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
               Q  LN+                    H +  H                         
Sbjct: 136  SFTQCFLNL-------------------GHGISSH------------------------- 151

Query: 468  ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAASL 526
                        +DC  + C LE+ LD+ + T+ DR+E+E  VP   E+   YD K    
Sbjct: 152  ------------LDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCF 199

Query: 527  WSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
              L E+L  +  +  +A  +  +  +       D   KE  R+               L 
Sbjct: 200  EDLSEELGVL-CSKYDALITELQNKRSDMYKDADDITKESKRR---------------LS 243

Query: 587  QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE-----SYLSKVVSLL 641
            + +  I Y L ++G  CA +  +  +   Q        +D   Q+     S L    S L
Sbjct: 244  KSIAKICYCLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDANGSRLFAENSAL 303

Query: 642  QCELVEGAVSKKDAK-------VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIG 694
              +  E A+   D +       +++SE+G VE                            
Sbjct: 304  HMKFFEEALHLIDKRLQQGIDMLLNSESGCVE---------------------------- 335

Query: 695  AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
             A   G ++PK+  LI+I   + ++   R +IFV+R + A V+ ++  ++  L+    + 
Sbjct: 336  -AAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSF 394

Query: 755  LIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
            L G  +S +  T +MQ +T+  FR G+V LL  T VAEEG+ + +C+ VIRFDL +T  +
Sbjct: 395  LTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRS 454

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
            Y+QSRGRAR+  S YILMIERGN+     +             AI R++ S +K  S   
Sbjct: 455  YVQSRGRARQEDSQYILMIERGNVKQNDLI------------SAIVRSETSMVKIASSRE 502

Query: 874  SVDAVPGTV-------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
            S +  PG V       Y V +TGA V+ +S++ +++ YC +LP D+    +P F    H+
Sbjct: 503  SGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHD 562

Query: 927  KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                   Y C L LP +A  + L GP   +M  A+Q VCL ACKKLHE+GA  D L    
Sbjct: 563  DG-----YVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLC--L 615

Query: 987  GSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
               +   ++   ++G  + GT + +E +         G W+
Sbjct: 616  SVEDPVPEIVSKNKGTGI-GTTKRKELHGTTRIHAWSGNWV 655


>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  347 bits (891), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 258/792 (32%), Positives = 386/792 (48%), Gaps = 118/792 (14%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+ L+ A ++NTI +LETG+GKTLIAV+L+RS  + L R+    +AVFLVPKV L
Sbjct: 28   ARSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSYAHHL-RKPSPQIAVFLVPKVVL 86

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            V QQAE +++ T   VG Y G+MG DFWDA  W++E    +V VMT  ILLN LRHS +K
Sbjct: 87   VSQQAEAVKKHTDLKVGLYWGDMGIDFWDAATWKQEVQKYEVFVMTPAILLNCLRHSFLK 146

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +  I +LI+DECHHA  KHPY+ +M+EFYH    +     P +FGMTASP+  K  + ++
Sbjct: 147  LNLIKVLIMDECHHARGKHPYASIMTEFYHHQLNSGISDLPRIFGMTASPIKSKVGNCEL 206

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
              +  I  L + + S V T      L + +P  +     Y        L E L      +
Sbjct: 207  SWSENIRKLMTLMHSKVYTCVSEAVLTEFIPTSTPKFKFYQGNEVQSVLFEDLAFKLKML 266

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            +E  +S+ + S   F  +    A+   ++++                   A+ + L ELG
Sbjct: 267  KEQHESNLKSS--DFTKSAAEFARRRTKKIFS------------------ALIFCLDELG 306

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
             W A K A+S  +   ND                   + L         V K        
Sbjct: 307  VWLALKAAESLSS---ND-------------------IQLFSWGHSGDTVVK-------- 336

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSG-----GEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
               F+  G       + L +++  G     G+++   +   +   KV      LI  +L+
Sbjct: 337  --NFISAGV------QTLKTYLPCGPQWSIGDNIKYDVEMELLSSKVC----CLIDSILE 384

Query: 716  YQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ-ETI 773
            Y+   D R IIFVERV+ A+VL  +    LP  +  K+  + G N   + ++ + Q E +
Sbjct: 385  YRGLTDMRCIIFVERVITAVVLRDLLNTLLPKYNSWKTKFIAGQNFGLQNQSRKKQNEIV 444

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             +FR G V ++VATS+ EEGLD+  CN+VIRFD   TV ++IQSRGRAR   SDYILM++
Sbjct: 445  EEFRMGLVNIIVATSILEEGLDVESCNLVIRFDPCHTVCSFIQSRGRARMQNSDYILMVK 504

Query: 834  RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVS 893
             G+    + L     S + +RKE++  + L         +  D      Y+V ST A  +
Sbjct: 505  SGDSVTCSRLAKYLASGDIMRKESLRHSSLP-----CDPLEEDRFDKETYRVASTEAFAN 559

Query: 894  LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
            L+S++ LIH YCS+LP+D Y   +P     R +K  G       L LP + P + +   V
Sbjct: 560  LSSSISLIHLYCSRLPADGY--FKPTL---RWDKETG------TLYLPKSCPLQPIR--V 606

Query: 954  CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQN---DEGEPLPGTARH 1010
                ++ +   CL ACK+LH++GA +D L+PD    E + +   N   DE +P       
Sbjct: 607  EGDKKILKNIACLEACKQLHKIGALSDNLVPDIVMEEAEVEELGNEPYDENQP------- 659

Query: 1011 REFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLF 1070
              F P G+ + +                ++H +       NN  S D     V D  +L 
Sbjct: 660  -TFVPFGLVNSVSN----------NSQTVYHCYFME---FNNKFSYD---VSVQDIFLLM 702

Query: 1071 SSELDAELASLK 1082
              ELD E+  ++
Sbjct: 703  RIELDPEIGCMQ 714



 Score =  329 bits (843), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 347/670 (51%), Gaps = 78/670 (11%)

Query: 1185 PTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAH 1244
            P  G +G     + +  + + P   + + H   + T K  +  SC     L+  +V  +H
Sbjct: 784  PAMG-KGKYTAINWLAVNSVNPSEVSCKYHEPHIRT-KSGLVCSC----KLQNALVCTSH 837

Query: 1245 S-GK-RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGR 1302
              GK  FY+ +   E+   S    + G +     ++Y  YY+Q +G++L F+ Q L++ R
Sbjct: 838  PIGKISFYIATGTMELDGNSPMELRGGGV-----TTYKKYYEQHHGIQLQFEHQRLLKAR 892

Query: 1303 GVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI--HPLPGSLVRGAQRLPS 1360
             +   KN       H  +Q  EGE  + K + V LPPELC I   P+  SL+     +PS
Sbjct: 893  HIFQVKNHC-----HGRKQGKEGE--VSKAF-VELPPELCSIVMMPISDSLIYSYSFIPS 944

Query: 1361 IMRRVESMLLAIQLKDK-----INYPVPASKILEALTAASCQETFCYERAELLGDAYLKW 1415
            IM R ES+L A  LK           +   K+LEA+T   C+E F YE  E LGD++LK+
Sbjct: 945  IMHRFESLLGAFNLKKMHLDHCARNEIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKY 1004

Query: 1416 VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL 1475
              S+ LF  Y   HEG L+  R++++SN  L +   S GL  +I+ + F P+ W  PG  
Sbjct: 1005 AASQQLFKTYHNHHEGLLSLKREKIISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGDK 1064

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTL 1535
            P             F  ++ VA+ K                        S  R L  K +
Sbjct: 1065 P-----------RSFKLKELVAKGKTIY--------------------VSGKRKLRQKIV 1093

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHAL 1595
            ADVVEALIG +   GG+ AA   M W+GI+V  +  ++         PE +   V+   L
Sbjct: 1094 ADVVEALIGAFLSTGGEKAALLFMDWVGIKVSFN--KIPYDRHFDIQPEKL---VNVSFL 1148

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            E  L   F DR LLVEA+TH S     V  CYQRLEF+GD+VLD+LIT HL+  Y  + P
Sbjct: 1149 ESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPGMTP 1208

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G+LTD+R+A+VNN+ +A  A+KH LH H+ H S  L   +   + +  ++L     ++FG
Sbjct: 1209 GQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQELHMHVSATLNK-FDKL--SSLSTFG 1265

Query: 1715 L-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
               +   PKVLGDIVES+AGAI +DSG +  VVWQ  +PLL+P+VTPETL +HP+REL E
Sbjct: 1266 YEAETSLPKVLGDIVESLAGAILVDSGYNKEVVWQSIRPLLEPLVTPETLKLHPIRELNE 1325

Query: 1774 RCQQQAEGLEYK-ASRSGNLAT--VEVYIDGV--QVGVAQNPQKKMAQKLAARNALAVLK 1828
             CQ+++  +  +  SR   L    +EV  DG+  +     +  +  A+K+  +  L  LK
Sbjct: 1326 LCQKRSYKIILEDVSRKDGLTYYRMEVEADGIIHKYEYKGDALRDTAKKIVCKEILNSLK 1385

Query: 1829 E----KETAE 1834
            +    K+TA+
Sbjct: 1386 DGGAHKDTAK 1395


>gi|50399920|gb|AAT76308.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
           sativa Japonica Group]
          Length = 585

 Score =  347 bits (890), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 226/623 (36%), Positives = 337/623 (54%), Gaps = 88/623 (14%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34  ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94  VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
           ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K ++  
Sbjct: 154 LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLNPH 213

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
            + + +I  +E+ ++S V T+     L +++P  S  +V++D +     LH  +      
Sbjct: 214 -NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANI------ 266

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL-RAINYALGE 598
                 S   R   + + A D       R+++G S     + A   I KL     Y L  
Sbjct: 267 -----LSCLNRLNKKHIEALD-------RKLHGSS----LENAKQRISKLHHTFVYCLYN 310

Query: 599 LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
           LG W A K A+     +Q+ E  +    + F    L K         VEG +     +V 
Sbjct: 311 LGVWLAAKAAE-----VQSYEENS----LSFWGETLDKN--------VEGFIRNYSEEVH 353

Query: 659 DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
              + F++ G                   H+     A   DG +TPKV  LI+ LL+Y+H
Sbjct: 354 RELSCFLKNG-------------------HIGEKFPADSQDGILTPKVHCLIRTLLQYRH 394

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIAK 775
            +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E +  
Sbjct: 395 MQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNH--TEIVES 452

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ RG
Sbjct: 453 FRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRG 512

Query: 836 NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVEST 888
           ++   T      N+E+ L    I R      +++ RL S+   P        T Y+VEST
Sbjct: 513 DVEAQT------NAEKFLASGQIMR------EESLRLGSISCQPLENTLCEDTYYRVEST 560

Query: 889 GAVVSLNSAVGLIHFYCSQLPSD 911
            A+V+LNS+V LIHF+CS+LPSD
Sbjct: 561 RAIVTLNSSVPLIHFFCSKLPSD 583


>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
          Length = 1608

 Score =  347 bits (890), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 248/749 (33%), Positives = 351/749 (46%), Gaps = 140/749 (18%)

Query: 303  QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM------LAVF 356
            Q R YQ ++  +A ++N IA L+TG+GKTLI+++LI+ +   LQ + +++      LA F
Sbjct: 95   QPREYQYELFTKALEENIIAVLDTGSGKTLISIMLIKQMV--LQERQERLTRRETKLAFF 152

Query: 357  LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            LV +VPLV+QQA VIR      +   CGEM  D W  +RW+  F+   V VMTAQI L+ 
Sbjct: 153  LVDRVPLVFQQASVIRANCDVNLEEICGEMEVDAWSEKRWKLIFEENDVCVMTAQIFLDT 212

Query: 417  LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
            L H  I +E  +LLI DECHHA KKHP++L+M EFY     E RP +FGMTASP++ +  
Sbjct: 213  LHHGFISLEKAHLLIFDECHHATKKHPFNLIMREFYDRCPLEHRPKIFGMTASPMHARTT 272

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
              +      +  LE  L + V T  + + L   +P P E+ + YD               
Sbjct: 273  VER-----SVAQLEKNLHARVYTATNMESLNISIPKPREISIHYDPTPR----------- 316

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                EE   S   R K   +G          ++ + +++                    L
Sbjct: 317  ---YEETEMSKKIREKLGSIG--------RYKRCFIITQDI------------------L 347

Query: 597  GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
              LG WC+ ++ +S L+ L+                   K+ ++                
Sbjct: 348  TSLGPWCSDRMWKSMLSELER------------------KMTNM---------------- 373

Query: 657  VVDSENGFVEGGTNEIEEGELLDSHVV--SGGEHVDVIIGAAVAD----GKVTPKVQSLI 710
                        T ++E   L+D  +      E+VD I      D       +PKV  LI
Sbjct: 374  ------------TQDLERDALIDEDLALKETHEYVDPIEFPRNPDIFDQSLFSPKVAELI 421

Query: 711  KIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE---MRT 766
            ++L    +   DF  IIFVER   A  L  + A L  L  ++  SL GH +++E     T
Sbjct: 422  RLLQFTSERIPDFCCIIFVERRHTAKALQTLIASLDRLKDIRCESLTGHGSTEEGDVQMT 481

Query: 767  FQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
            F  Q + I KFR G + LL+AT+VAEEGLDI+ CNVV RFD   T+++YIQSRGRARK G
Sbjct: 482  FGDQNKIIQKFRSGELNLLIATNVAEEGLDIQPCNVVFRFDFFHTLISYIQSRGRARKEG 541

Query: 826  SDYILMIERGNLSH--------------ATFLRNARNSEETLRKEAIER-----TDLSHL 866
            S +I++ E  N                   F +         RK AI       +D  ++
Sbjct: 542  SKFIILTEANNAGQEDTLAEFSRLEADMKAFCQTMPEERNVARKYAISMDVDYDSDEDYI 601

Query: 867  KDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
             D       DA     + V  TGA ++  +AV LIH YCS LPSD + +L+P F     E
Sbjct: 602  SDEEENFLADA-----FIVPETGATITKQNAVPLIHKYCSSLPSDSFCVLKPIF-----E 651

Query: 927  KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                   Y CKL LP NAPF+++E  VC S  LA+ +V L AC +L E+ A    LLP  
Sbjct: 652  NIVTGEGYICKLILPSNAPFQEMESHVCGSKDLARASVALNACIRLRELDALDKHLLPRN 711

Query: 987  GSGE-QQEKVDQNDEGEPLPGTARHREFY 1014
               E   +   Q DE   + G+ R    Y
Sbjct: 712  LKREILGDMAPQYDENGYIIGSRRRHGLY 740



 Score =  247 bits (631), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 175/551 (31%), Positives = 270/551 (49%), Gaps = 71/551 (12%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFP-----RKEGYLGPLEYSSYADYYKQKYGVELIF 1293
            +V  + + +R++V ++R +M+  S  P     R+ GY      +S+ADYY +K  VE + 
Sbjct: 1011 VVDQSDNMRRYFVTNVRTDMSPLSPVPDGVKIRETGY------ASFADYYNEKKFVEELD 1064

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
              QP++  + +    N L P      + +G        T+ V   P  C    +  S+ +
Sbjct: 1065 TSQPMLEVKRLKKVMNFLYPGKPSQAQMKGPM-----STWTV---PSFCQRFFMSASVYQ 1116

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYL 1413
                +PSIM R++S+LL  Q  ++ + P+  + +LEA T  S      YER E LGD+ L
Sbjct: 1117 ATMMIPSIMTRIDSILLCRQSAERYDLPIDDANMLEAYTTPSANMEMNYERLETLGDSLL 1176

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K++ +  L++ +P  +EG+L  +R +++ N  LY+ A       Y+ +  F    W  PG
Sbjct: 1177 KFIATIRLYINFPFSNEGELHHLRIRVICNRALYRSAKRLKFYRYVTSQAFNRRYWRPPG 1236

Query: 1474 VL-PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSS 1532
               P  +++T DG                                         Y  LS 
Sbjct: 1237 FTSPADNQETIDG---------------------------------------LKYHKLSD 1257

Query: 1533 KTLADVVEALIGVYYV----EGGKDAANHL-MKWIGIQVESDPEEVGCPSR---PACVPE 1584
            KTLAD+VEA +G  Y+    EGG  AA  L + +  I+   D +     SR   PA    
Sbjct: 1258 KTLADIVEASLGAAYLSNGLEGGLHAAIQLQIPFDEIKTWDDFKPTFEESRKQVPARAEV 1317

Query: 1585 SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKH 1644
              LRS+D   + + +  +FK   L+VEA+THAS P+S   CYQRLEF+GDA+LD ++ ++
Sbjct: 1318 RALRSLDLPKVTEIVGREFKTPLLIVEALTHASLPNSTSPCYQRLEFLGDAILDFMVIRY 1377

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
            LF  Y +  PG +TDL+ + VNN     V ++  L+ H+ H S  L R I  FV EV E 
Sbjct: 1378 LFARYPDADPGIITDLKDSCVNNHILGIVCIETGLYRHIIHYSGKLIRAIEFFVSEVEET 1437

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ----PLLDPMVTP 1760
              +         D   PKVL D+VES+ GA F+D+G     V ++F     P+L+  VTP
Sbjct: 1438 KARGEAVGEYWVDFNIPKVLSDVVESMLGATFVDAGFRLEAVEELFAKWFLPILNNHVTP 1497

Query: 1761 ETLPMHPVREL 1771
            E +  HP+R+L
Sbjct: 1498 ELIKFHPLRKL 1508


>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
          Length = 1858

 Score =  345 bits (884), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 244/655 (37%), Positives = 346/655 (52%), Gaps = 82/655 (12%)

Query: 1208 REAMQIHNADMPTGKLM-MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFP- 1265
            RE + I ++D   G L+ +A+    A  L+  +V A H+GK +    I  E++ +S+F  
Sbjct: 811  RELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDIT-ELSGDSAFDG 869

Query: 1266 ---RKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFE---HSE 1319
               +KE      ++ ++A+Y+K+KYG+ L    QPL+  +      NLLS +F    +  
Sbjct: 870  ASDKKE-----CKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVV 924

Query: 1320 EQEGEGEEILDKTY-YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            E    G  +++KT   V +PPEL     LP  ++R     P++M R+ES+ LA QL+ +I
Sbjct: 925  ENMSNGTPVVNKTSNRVHMPPELLIPLDLPVEILRSFYLFPALMYRIESLTLASQLRSEI 984

Query: 1379 NYP---VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
             Y    + +  ILEA+T   C E F  ER ELLGD+ LK+              EGQL+ 
Sbjct: 985  GYSDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYA------------DEGQLSS 1032

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL---------PVFDEDTKDGD 1486
            +R  M+ N  LY+  + + +Q Y++   F P RW APG L         PV  E   D D
Sbjct: 1033 IRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPVKSEVVTD-D 1091

Query: 1487 SSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVY 1546
              + D +K++   K   DK +                    R + SKT+AD  EA+IG Y
Sbjct: 1092 IHIID-DKAIVLGK-ACDKGH--------------------RWMCSKTIADCFEAIIGAY 1129

Query: 1547 YVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            Y  GG  AA  ++KW+GI  E + + +      A V   + +   F  LE  L   F  +
Sbjct: 1130 YAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVK 1189

Query: 1607 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            GLLVEA+TH S+   G   CY+RLEF+GDAVLD L+T++LF S+ +   G LTDLR+A+V
Sbjct: 1190 GLLVEALTHPSQQELGAKYCYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASV 1249

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-------ELLKPGFNSFGLGDC 1718
            NNENFA+VAVKH  H  L+H S  L  QI ++V   LE       ELL  G         
Sbjct: 1250 NNENFAQVAVKHNFHHFLQHSSGLLLDQITEYVNR-LEGSSMDKVELLSDGLP------- 1301

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQ 1778
            K PKVLGDIVESIAGAI LD+  D  VVW +F+PLL P+VTPE L + P REL E C + 
Sbjct: 1302 KGPKVLGDIVESIAGAILLDTKLDLDVVWGIFEPLLSPIVTPENLELPPYRELIEWCGKH 1361

Query: 1779 AEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
               +       G+  +AT++V +  V + V Q   KK     A  ++L +LK+ E
Sbjct: 1362 GYFVGINCRDQGDTVVATLDVQLKEVLL-VRQGFSKKRKDAKAHASSL-LLKDLE 1414



 Score =  263 bits (671), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 219/761 (28%), Positives = 333/761 (43%), Gaps = 146/761 (19%)

Query: 288  KVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR 347
            + GK+   K +  +   R YQLDV E A ++NTIA L+TGAGKT+IAV+LI+      + 
Sbjct: 20   EAGKQKLQKRECQDFTPRRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRT 79

Query: 348  QNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
            +N   + +FL P V LV QQ EVI   T + V  Y G  G D W         DT  V  
Sbjct: 80   KNAGKVIIFLAPTVQLVAQQCEVIEIHTDFEVEQYYGAKGVDQWTGHG----HDTTGVPT 135

Query: 408  MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
               Q  LN+                    H +  H                         
Sbjct: 136  SFTQCFLNL-------------------GHGISSH------------------------- 151

Query: 468  ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAASL 526
                        +DC  + C LE+ LD+ + T+ DR+E+E  VP   E+   YD K    
Sbjct: 152  ------------LDCEGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCF 199

Query: 527  WSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
              L E+L  +  +  +A  +  +  +       D   KE  R+               L 
Sbjct: 200  EDLSEELGVL-CSKYDALITELQNKRSDMYKDADDITKESKRR---------------LS 243

Query: 587  QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE-----SYLSKVVSLL 641
            + +  I Y L ++G  CA +  +  +   Q        +D   Q+     S L    S L
Sbjct: 244  KSIAKICYCLDDVGLICASEATKICIERGQEKGWLKEVVDATDQQTDVNGSRLFAENSAL 303

Query: 642  QCELVEGAVSKKDAK-------VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIG 694
              +  E A+   D +       +++SE+G VE                            
Sbjct: 304  HMKFFEEALHLIDKRLQQGIDMLLNSESGCVE---------------------------- 335

Query: 695  AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
             A   G ++PK+  LI+I   + ++   R +IFV+R + A V+ ++  ++  L+    + 
Sbjct: 336  -AAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTVSF 394

Query: 755  LIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
            L G  +S +  T +MQ +T+  FR G+V LL  T VAEEG+ + +C+ VIRFDL +T  +
Sbjct: 395  LTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTTRS 454

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
            Y+QSRGRAR+  S YILMIERGN+     +             AI R++ S +K  S   
Sbjct: 455  YVQSRGRARQEDSQYILMIERGNVKQNDLI------------SAIVRSETSMVKIASSRE 502

Query: 874  SVDAVPGTV-------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
            S +  PG V       Y V +TGA V+ +S++ +++ YC +LP D+    +P F    H+
Sbjct: 503  SGNLSPGFVPNEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHD 562

Query: 927  KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                   Y C L LP +A  + L GP   +M  A+Q VCL ACKKLHE+GA  D L    
Sbjct: 563  D-----GYVCTLALPPSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLC--L 615

Query: 987  GSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
               +   ++   ++G  + GT + +E +         G W+
Sbjct: 616  SVEDPVPEIVSKNKGTGI-GTTKRKELHGTTRIHAWSGNWV 655


>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
            [Oryza sativa Japonica Group]
          Length = 1017

 Score =  343 bits (881), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 220/615 (35%), Positives = 330/615 (53%), Gaps = 66/615 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 451  LKNSIVCTPHNNI-FYVISGFLDLDANSCLPQHDGTV-----VTYKDYFKTRHGLTLTFE 504

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 505  NQPLLAGSKHVKVRNFLHNCYSKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 557

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 558  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 617

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 618  LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 677

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +D     F          L  +  Y++ +                
Sbjct: 678  DW----IIPCLDYDERDNKKISF----------LAPNGMYSQRKMS-------------- 709

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 710  --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 765

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              ++  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 766  --INVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 823

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  +++E  +   
Sbjct: 824  SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFT 883

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 884  GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 940

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATV-------EVYIDGVQVGVAQNPQKKMAQKL 1818
             PV+ LQE C +++  + Y+ +    +++V       E      + G  +   KK+A K 
Sbjct: 941  DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKA 1000

Query: 1819 AARNALAVLKEKETA 1833
              ++ +A  K+ E A
Sbjct: 1001 VLKDLIAGHKDTEAA 1015



 Score =  179 bits (453), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 43/315 (13%)

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIA 774
            H +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E + 
Sbjct: 1    HMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHT--EIVE 58

Query: 775  KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIER 834
             FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ R
Sbjct: 59   SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGR 118

Query: 835  GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVES 887
            G++   T       S + +R+E++            RL S+   P        T Y+VES
Sbjct: 119  GDVEAQTNAEKFLASGQIMREESL------------RLGSISCQPLENTLCEDTYYRVES 166

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            T A+V+LNS+V LIHF+CS+LPSD Y    P F +   +K  G    +C L LP ++P +
Sbjct: 167  TRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDI---DKASG----TCTLHLPKSSPVQ 219

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLP 1005
             +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P  
Sbjct: 220  TVN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP-- 275

Query: 1006 GTARHREFYPEGVAD 1020
                   ++PE   D
Sbjct: 276  ------SYFPEEFVD 284


>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
          Length = 1318

 Score =  343 bits (880), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 220/615 (35%), Positives = 330/615 (53%), Gaps = 66/615 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 752  LKNSIVCTPHNNI-FYVISGFLDLDANSCLPQHDGIV-----VTYKDYFKTRHGLTLTFE 805

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 806  NQPLLAGSKHVKARNFLHNCYSKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 858

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 859  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 918

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 919  LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 978

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +D     F          L  +  Y++ +                
Sbjct: 979  DW----IIPCLDYDERDNKKISF----------LAPNGMYSQRKMS-------------- 1010

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 1011 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 1066

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              ++  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 1067 --INVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1124

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  +++E  +   
Sbjct: 1125 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFT 1184

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 1185 GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 1241

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATV-------EVYIDGVQVGVAQNPQKKMAQKL 1818
             PV+ LQE C +++  + Y+ +    +++V       E      + G  +   KK+A K 
Sbjct: 1242 DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKA 1301

Query: 1819 AARNALAVLKEKETA 1833
              ++ +A  K+ E A
Sbjct: 1302 VLKDLIAGHKDTEAA 1316



 Score =  277 bits (709), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 213/697 (30%), Positives = 336/697 (48%), Gaps = 124/697 (17%)

Query: 336  LLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQR 395
            +L+R+  + ++R + +  AVFLVP V LV QQA V+ + T  VV  +CGEMG DFWDA  
Sbjct: 1    MLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAAT 60

Query: 396  WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH-- 453
            W+ + +  +VLVMT QILL+ LRHS  +++ I LLI DECH A    PY+ +  EFYH  
Sbjct: 61   WRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHRARGNAPYACIFKEFYHPQ 120

Query: 454  --TTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVP 511
              +++ +  P +FGM+A+ +  K + +Q + + +I  +E+ ++S V T+     L +++P
Sbjct: 121  LNSSASDPLPRIFGMSATLIYSKDL-NQHNYSKQISEIENLMNSKVYTVDSESALSEYIP 179

Query: 512  MPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY 571
              S  +V +D +     LH  +      + E           + + A D       R+++
Sbjct: 180  FASTKIVHFDDSNISSELHANILSCLNGLTE-----------KHIEALD-------RKLH 221

Query: 572  GVSERTESDGAANLIQKL-RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
            G S     + A   I KL     Y L  LG W A K A+     +Q+ E  +    + F 
Sbjct: 222  GSS----LENAKRRISKLHHTFVYCLYNLGVWLAAKAAE-----VQSYEENS----LSFW 268

Query: 631  ESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVD 690
               L K         VEG +     +V    + F++ G                   H+ 
Sbjct: 269  GETLDKN--------VEGFIRNYSEEVHRELSCFLKNG-------------------HIG 301

Query: 691  VIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
                A   DG +TPKV  LI+ LL+Y+H +D R I+FV+RV+ ++VL  + + +  +S  
Sbjct: 302  EKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVQRVITSIVLEPLLSSIHQMSGW 361

Query: 751  KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
                + G      SQ  +     E +  FR G+V +++AT + EEGLD+  CN+VIRFD 
Sbjct: 362  NVKHMAGSRPGLLSQSRKNH--TEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDP 419

Query: 808  AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATF--LRNARNSEETLRKEAIERTDLSH 865
            + TV ++IQSRGRAR   SDY+L+I R   +      +    N+++ L    I R     
Sbjct: 420  SATVCSFIQSRGRARMENSDYLLLIGRHVFNFVALGDVEAHTNAKKFLASGQIMR----- 474

Query: 866  LKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERH 925
             +++ RL S+   P     +E+T               Y   LP  R+ I          
Sbjct: 475  -EESLRLGSISCQP-----LENT--------------LYFKPLP--RFDI---------- 502

Query: 926  EKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP- 984
            +K  G    +C L LP ++P + +   V     + ++ VCL AC++LH +GA TD LLP 
Sbjct: 503  DKASG----TCTLHLPKSSPVQTVN--VEGEGSILKETVCLKACQELHAIGALTDSLLPE 556

Query: 985  -DKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
             D    E+ + V +N   +P         ++PE   D
Sbjct: 557  LDVPCDEEPDIVVENKIEQP--------SYFPEEFVD 585


>gi|413933739|gb|AFW68290.1| hypothetical protein ZEAMMB73_539070 [Zea mays]
          Length = 707

 Score =  343 bits (880), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 219/632 (34%), Positives = 326/632 (51%), Gaps = 77/632 (12%)

Query: 1220 TGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            TG +   D    +  L   IV   H+G  FY      ++ A S   R +G      + SY
Sbjct: 137  TGIVQTKDGTFCSCMLRNSIVCTPHNG-MFYAVCGFLDLNANSLLHRSDG-----SFLSY 190

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPP 1339
              Y+K++Y ++L  + Q L+  R +   +N L  +  + +E+E  G+ +++      LPP
Sbjct: 191  KTYFKERYNLDLRCEDQALLEARKLVEVRNFLH-KCNYKKEKERSGKSVVE------LPP 243

Query: 1340 ELCFI--HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALT 1392
            ELC +   P+    +R    +PSIM R++ MLL++ LK ++      + +PA KILEALT
Sbjct: 244  ELCIVVMSPMSAITLRSFTFIPSIMYRIQCMLLSMNLKMQLGPSMQQFDIPALKILEALT 303

Query: 1393 AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
              +CQE F  E  E LGD++LK++ ++  F+KY  +HEG LT+M++ ++SN  L Q A S
Sbjct: 304  TKNCQEEFSQESLETLGDSFLKYITTQHFFVKYKHQHEGMLTKMKKNVISNAALCQLACS 363

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              L  YI+++ F P  W  PGV                                      
Sbjct: 364  NNLVGYIRSEAFNPKTWIVPGV-------------------------------------G 386

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
             D+ D  L       R L SK +AD VEALIG Y    G+ AA   +K +G+ +E     
Sbjct: 387  YDICDRSL-------RKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGMDIEFHKMP 439

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEF 1631
            +        +       ++  +LE  L   F D  LL+EA+TH S   +G + CYQRLEF
Sbjct: 440  I-----ERVITIKAEEFINVKSLELLLDYSFNDPSLLMEALTHGSYQIAGTTPCYQRLEF 494

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLDH+ T + +  Y    P  LTDLR+A+VNN  +A  AVK  LH H+ H SSAL 
Sbjct: 495  LGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHVLHSSSALH 554

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            +++ D++ +  +    P   S G       PKVLGD+VESIAGAI++D+  D  VVW+  
Sbjct: 555  KRMADYLDKFEQSFSGP---SHGWEAGISLPKVLGDVVESIAGAIYIDAKHDKGVVWRSM 611

Query: 1751 QPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV--EVYIDGVQVGVAQ 1808
            + +L+P+VTP+TL   PV+ELQE C  +   LEY  +R   +++V  EV  +G      +
Sbjct: 612  KRILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTVTRDNGVSSVVAEVRTEGTTYKATR 671

Query: 1809 NPQKKM-AQKLAARNALAVLKEKETAEAKEKG 1839
                K+ A+KLAA + L  LK  +T +    G
Sbjct: 672  TGFSKLDAKKLAASSVLRDLKAADTKQYSANG 703


>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
          Length = 1445

 Score =  340 bits (873), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 228/617 (36%), Positives = 319/617 (51%), Gaps = 87/617 (14%)

Query: 1239 IVTAAHSGKR--FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQ 1296
            ++   H+GKR  +    +  +M  +S    K       +Y+SY+DYY +K+   L F +Q
Sbjct: 867  LIQTEHTGKRCLYCARELIPDMNGQSPMIMKVS-----KYNSYSDYYLKKHNRTLNFVEQ 921

Query: 1297 PLIRGRGVSYCKNLLSPRFEH----SEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGS 1350
            P+++ + +    NLL+ R       +EEQ+ E          V LP ELC   +  L  +
Sbjct: 922  PMLKAKPLIQVNNLLTQRTTSERPAAEEQKTES--------LVELPLELCKIMVKGLSCA 973

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKI----NYPVPASKILEALTAASCQETFCYERAE 1406
            L  G   LPS M R+E +LLA+Q +  +    + PVPA+ +LEA+T + CQE+F  E  E
Sbjct: 974  LTNGISLLPSFMHRLEGLLLAVQFRKSLPSPHSSPVPANLMLEAITTSKCQESFSLEGLE 1033

Query: 1407 LLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
            LLGDA+L+  VS  LFL + +  EG+L++ R  ++ N +L +    +G+ +YI+  +F+P
Sbjct: 1034 LLGDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNKMLERLGRERGIMNYIRDTQFSP 1093

Query: 1467 SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS 1526
              WA P                                             G +      
Sbjct: 1094 KEWATP---------------------------------------------GRVRETQCK 1108

Query: 1527 YRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---ESDPEEVGCPSRPACVP 1583
               L  KT+ADV EALIG +Y+ GG +AA  +M W+G +V    S  EE           
Sbjct: 1109 LPPLQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGCEVGVSSSIREEARTRVHGQL-- 1166

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
              +L       LE  L  KF+++GLLVEA+THAS       CYQRL F+GDAVLD LITK
Sbjct: 1167 -ELLSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHSGDCYQRLGFLGDAVLDFLITK 1225

Query: 1644 HLFFSYTNLP--PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            H + +  NL   PG LTDLR+AAVNNE FARVAV+H LH++L H SS L  ++  +V   
Sbjct: 1226 HFYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARVDKYVHGS 1285

Query: 1702 LEEL--LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
              ++  L   F       C + +VL D+VES+AGA+FLDSG     VW VF+ LL P+VT
Sbjct: 1286 TTDVCALSEAFLLSKHLSCSSMQVLSDLVESLAGAVFLDSGYKLDTVWNVFKQLLKPLVT 1345

Query: 1760 PETLPMHPVRELQERCQQQAEG-LEYKASRSG-----NLATVEVYIDGVQVGVAQNPQKK 1813
            P TL + P+REL E CQ +  G   YK  R          TVE+  D    GV + P +K
Sbjct: 1346 PATLRLEPIRELWELCQTEKFGEPNYKKKREAMGDFDMTVTVELK-DETITGVGRKPDEK 1404

Query: 1814 MAQKLAARNALAVLKEK 1830
             A+K+AA  AL  LK K
Sbjct: 1405 SARKVAAIQALETLKVK 1421



 Score =  339 bits (869), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 240/731 (32%), Positives = 372/731 (50%), Gaps = 75/731 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ++ LE+AKK++ I +LETG GKT +AV+L++ I  DL R+    +AVFL P VPLV
Sbjct: 32   RGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIA-DLIRKPSTRIAVFLCPSVPLV 90

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQA V++  T + VG Y GE+  + W+++ W+ E +  ++ VMT  ILL+ L H  ++M
Sbjct: 91   QQQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVMTPAILLHNLHHCFMRM 150

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-PSVFGMTASPVNLKGVSSQVDCA 483
            + I LLI DECHHA   HPY+ +M EFYH      R P + GMTASP+N K V+ Q D  
Sbjct: 151  DCIELLIFDECHHAHSHHPYANIMQEFYHGKEDLYRLPRILGMTASPINGK-VNCQGDSI 209

Query: 484  -IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              KI  +E  L + + T+K+  EL+  VP P      Y+ A +   +  +  Q+   +++
Sbjct: 210  RTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYESAQTPNPVTLKFCQLLFDLQK 269

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
                +        +G   +G + EL  +  +    E     N+ +   ++ Y   ELG  
Sbjct: 270  ECIGT-------LLGT--SGCEGEL--LGELCSGVEKKRVKNVKKLCNSLGYCATELGPR 318

Query: 603  CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA--KVVDS 660
            CAY+  +  L    +D                         EL   +  KKD   K++++
Sbjct: 319  CAYEAVKILLHKYDSD----------------------CDPELDSNSEGKKDMLRKILNA 356

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
             N F+       +E E     V  G  ++            ++ KVQ LI +L + + T 
Sbjct: 357  LNSFLS------KEVEATSCAVPDGAANIQ----------NLSSKVQLLINVLERCRDTN 400

Query: 721  DFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNN-SQEMRTFQMQETIAKFRD 778
            + R IIFVER +   VL  + + +  LS   +  SL G N+ S +M     Q  +  FR+
Sbjct: 401  EMRCIIFVERKITTRVLASLLSSIEVLSPAFRFQSLAGKNSGSNDMNHKHQQNVVESFRN 460

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
            G V +LV+T+VAEEGLDI+ C++VIRFDL  T  + IQSRGRAR   S  I + ERGN  
Sbjct: 461  GEVNVLVSTNVAEEGLDIQNCHLVIRFDLPNTPCSLIQSRGRARCLKSTIIYLTERGNNE 520

Query: 839  HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
             +  L     +EE++++E      LS +K+   + + +      ++VESTGA +S   +V
Sbjct: 521  QSQRLEQFLLTEESMKEEV-----LSRIKNAEDVGAPETSTIETFRVESTGATMSTLCSV 575

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
             L+H YC++L  D +    P+F    + + G   +  C ++LP +A  + +EG   SS  
Sbjct: 576  SLLHQYCARLAHDSFYTPTPQF---SYSEDGSGVK--CTIKLPTDALVQSVEGRPVSSQA 630

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEG- 1017
             A++  CL AC++L++ GA T++LL      + +E     D   P   +   R+  P   
Sbjct: 631  DAKRVACLIACERLYDAGALTELLLL-----KSKENAYSLDAIAPESNSTTGRDPLPSRS 685

Query: 1018 --VADILQGEW 1026
              V D   G W
Sbjct: 686  IIVPDAFSGTW 696


>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2033

 Score =  340 bits (871), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 215/601 (35%), Positives = 323/601 (53%), Gaps = 59/601 (9%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            ++  +V   H+G  +  + +   + A S   ++          +Y +YY++++G++L F 
Sbjct: 1482 VQNALVYTPHNGYFYCTKGVLNNINANSFLTKRNS-----GDQTYIEYYEERHGIQLNFV 1536

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             +PL+ GR +    N L            + +E      +V LPPELC   + P+   ++
Sbjct: 1537 DEPLLNGRHIFTLHNYL--------HMTKKKKEKEHDKEFVELPPELCHVILSPISVDVI 1588

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDA 1411
                 +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T   CQ+ F  E  E LGD+
Sbjct: 1589 YSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTKKCQDQFHLESLETLGDS 1648

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
            +LK+ V + LF      HEG L+  +  M+SN++L Q+   + LQ +I+ + F P  W  
Sbjct: 1649 FLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRNECFEPKGWMV 1708

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
            PG             S+ +    ++  D L   +N                  +S R L 
Sbjct: 1709 PG-----------QHSAAY----ALVNDTLPESRNIY---------------VASRRNLK 1738

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVD 1591
             K++ADVVE+LIG Y  EGG+ +A   M W+GI+V+    ++   S     P    + V+
Sbjct: 1739 RKSVADVVESLIGAYLSEGGELSALMFMNWVGIKVDFTTTKIERES-----PIQAEKLVN 1793

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
               +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+GD+VLD+LITKHL+  Y 
Sbjct: 1794 VGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYP 1853

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
             L PG LTD+R+A+VNNE +A VAVK  LH H+ H S  L + I   V E  +  L+   
Sbjct: 1854 CLSPGLLTDMRSASVNNECYALVAVKENLHKHILHASHVLHKHISRTVSEFEQSSLQ--- 1910

Query: 1711 NSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVR 1769
            ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +PLL  M+TPET+ +HPVR
Sbjct: 1911 STFGWECDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVR 1970

Query: 1770 ELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVG-VAQNPQKKMAQKLAARNALAVLK 1828
            EL E CQ+     E   ++  N  TVEV    +     A+   KKMA+KLA +  L +LK
Sbjct: 1971 ELTELCQKSQ--FELSKAKDFNYFTVEVKAKEMSFAHTAKASDKKMAKKLAYKEVLNLLK 2028

Query: 1829 E 1829
            +
Sbjct: 2029 K 2029



 Score =  263 bits (673), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 222/713 (31%), Positives = 337/713 (47%), Gaps = 159/713 (22%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQ++ LE+A K+NTI F ETG+GKTLIA++L+RS  + L R+      VFLVP
Sbjct: 737  PLHFARSYQVEALEKAIKQNTIVFFETGSGKTLIAIMLLRSY-SYLFRKPSPCFCVFLVP 795

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQAE ++  T                       +    QVLVMT  ILL+ LRH
Sbjct: 796  QVVLVTQQAEALKMHT-----------------------DLQVVQVLVMTPAILLDALRH 832

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            S + +  I +L                ++ E +H   K     +                
Sbjct: 833  SFLNLSMIKVL----------------IVDECHHAGGKHPYACIM--------------- 861

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
                +  C  ES L   V     R +  +H+ +PS       K ASL    E+L+++ + 
Sbjct: 862  ---RVYTCENESVLAGFVPFSTPRFKYYQHMGIPS------SKRASLV---EKLEKLMIK 909

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA-INYALGE 598
                               R + A  +L+        +  D     + ++ + + Y L +
Sbjct: 910  ------------------HRLSLATLDLKS-------STVDSIEKRLSRISSTLTYCLDD 944

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS-KKDAKV 657
            LG   A K AQS L+A QND        V + E  +S V       LV+   S    A +
Sbjct: 945  LGILLAQKAAQS-LSASQNDF-------VLWGELNMSSVT------LVKKFCSDASQAFL 990

Query: 658  VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
             D  NG      N                      I   V  G +T K   LI+ LL Y 
Sbjct: 991  ADIPNGLNWSVAN----------------------INGKVEAGLLTSKTVCLIETLLSYS 1028

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAK 775
              E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + +T + Q E +  
Sbjct: 1029 SLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQNEIVED 1088

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR   SDY++M+E G
Sbjct: 1089 FRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYLMMVESG 1148

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG----TVYQVESTGAV 891
            +L   + L+   +  + +R+E++  +          L+    +P       ++VESTGA 
Sbjct: 1149 DLLTQSRLKKYLSGGKRMREESLHHS----------LVPCPPLPDDSDELFFRVESTGAT 1198

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG 951
            V+L+S+V LI+ YCS+LPSD Y    P F + + +        SC L LP + P ++++ 
Sbjct: 1199 VTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLYLPKSCPVKEVKA 1251

Query: 952  PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKVDQNDE 1000
               ++ ++ +Q VCL AC +LH++GA +D L+PD    E    + EK+  N E
Sbjct: 1252 Q--ANNKVLKQTVCLEACIQLHKVGALSDHLVPDMVVAETVAQKLEKIQYNPE 1302


>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
          Length = 1620

 Score =  339 bits (870), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 246/756 (32%), Positives = 365/756 (48%), Gaps = 84/756 (11%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            S + EK P + AR YQ+D+ ++A ++N + +L TG+GKT IAVLLI  +   L ++ +K 
Sbjct: 37   SVSVEKDPRKIARKYQMDLCKKALEENVVVYLGTGSGKTHIAVLLIYEM-GHLIKKPQKS 95

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
            + VFL P V LV QQA+VI E   + VG YCG+  +     Q W++E +  +VLVMT QI
Sbjct: 96   ICVFLAPTVALVQQQAKVIEESIDFKVGTYCGK-SKHLKSHQDWEKEMEQYEVLVMTPQI 154

Query: 413  LLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            LL+ L H  I++E I LLI DECH+A     HPY+ +M  FY      K+P +FGMTASP
Sbjct: 155  LLHNLSHCYIRIEFIALLIFDECHYAQVESDHPYAEIMKIFY-KPDVVKQPRIFGMTASP 213

Query: 471  VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
            ++ KG + +         LE+ L S V +++D+ ELE+ V  P   V +Y   +S  +  
Sbjct: 214  ISGKGATVE--------GLETLLRSKVYSVEDKDELEQFVASPKVNVYQYGPGSSCHT-- 263

Query: 531  EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
               K     +EE      +    + + +     K+ L++++G           +LI  L 
Sbjct: 264  ---KAYSQKLEEIKHQCVKELHKKAVDSTLRNTKKMLKRLHG-----------HLIFSLE 309

Query: 591  AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
                 LG LG        Q+    L+ D    +Q+                    VE  V
Sbjct: 310  N----LGVLG------ALQASCILLKGDHHERHQM--------------------VEAEV 339

Query: 651  SKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
            +  D  + D     V+          +  S     G + D+ +   + +   + K+  LI
Sbjct: 340  NASDDSLCDRYLSQVD---------TVFTSGCAKDGMNPDLALMEVLKEPYFSKKLLRLI 390

Query: 711  KILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQM 769
             IL  +    D + I+FV R+V A  L  +   L  LS  K   L+G H+  + M     
Sbjct: 391  GILSNFGVQPDMKCIVFVNRIVTARSLSYILQHLKILSSWKCGFLVGVHSGLKSMSRKNT 450

Query: 770  QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
               + KFR G + LL+AT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y 
Sbjct: 451  NIILDKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPKSEYA 510

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
             +++RGN      + +   SE  +  E   R   + + D             +Y+V+ TG
Sbjct: 511  FLVDRGNQRELDLIEHFTRSEAQMDDEISSRKSRTMVADFQE---------NIYKVDMTG 561

Query: 890  AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
            A VS   ++ L+H YCS+LP D Y   +P+F     +   G     CKL LP NA    +
Sbjct: 562  ATVSSALSISLLHHYCSKLPHDEYFCPKPQFYY--FDDVDGTI---CKLILPSNAAMHSI 616

Query: 950  EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTAR 1009
            E    SS+  A++  CL ACK LHE+GA TD LLPD+   E ++ V    + E   G   
Sbjct: 617  ESAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQAD-EDKDLVPDCSDSECCEGEDA 675

Query: 1010 HREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMY 1045
              E +   V   L+  W  +    C  S     F +
Sbjct: 676  REELHEMIVPASLKEPWTETDNPVCLNSYYISFFPF 711



 Score =  306 bits (784), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 208/619 (33%), Positives = 313/619 (50%), Gaps = 52/619 (8%)

Query: 1222 KLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYAD 1281
            +L +A+   +  D+   +V        F++  +  +  A S +   + ++         +
Sbjct: 849  QLQLANGSKSVHDVVNSLVYVPCKDAFFFISDVVKDKNAYSMYKDSKNHV---------E 899

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            +Y   + V L++  QPLI+ + +   +NLL  +  +SE ++ E        ++V LPPE+
Sbjct: 900  HYYDTFSVHLLYPDQPLIKAKQLFCLENLLRKK-GYSELRDKE-------EHFVELPPEI 951

Query: 1342 CFIHPLPGSLVRGAQR--LPSIMRRVESMLLAIQLKDKINYPVPASK------ILEALTA 1393
            C +  +  S   G+    LPSIM R+ES+L+AI+LK  ++   P  +      +LEALT 
Sbjct: 952  CQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGRELAIDHVLEALTT 1011

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             +C E+F  ER E+LGDA+LK+ V R LFL +    EGQLTR R   V+N  LY  A+ K
Sbjct: 1012 ENCHESFSLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVAIKK 1071

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
             LQ+YI+   F P  +   G                  +   V  +K  T+KN +     
Sbjct: 1072 NLQAYIRDQSFEPDHFYVVG------------------RPCPVTCNK-QTEKNIHGLCGS 1112

Query: 1514 DMEDGELEGDSSSYR-VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
              +  + E   S Y   L  KT+AD+VEAL+G + V+ G  AA   +KWIGI  +    +
Sbjct: 1113 GTDGIKTEVRCSKYHHWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIHTDFKEPQ 1172

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
            +      + V   +   +D   +E  L   F  +GLL++A  H S    G  CYQRLEF+
Sbjct: 1173 LKSICSASKVFMPLADEIDVLGIERLLGYSFIHKGLLIQAFIHPSYNRHGGGCYQRLEFL 1232

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GDAVLD+LIT +L+  Y  L PG+LTDLR+ +VNN  FA VAV+   H H+   SS L  
Sbjct: 1233 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRE 1292

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
             I  +V  +     +P      +     PK LGD+VES  GAI LD+G D +  WQ+   
Sbjct: 1293 SITRYVNFI----GRPDSTRGWVKSHLVPKALGDLVESCMGAILLDTGFDLNRAWQIILS 1348

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQ---N 1809
             L P+++   L ++P REL E CQ     L++  S+      VE  ++G  V  A    N
Sbjct: 1349 FLKPVMSFTRLQLNPTRELYELCQSFGWNLKFLPSKKDGNFLVEARVNGENVSAAASALN 1408

Query: 1810 PQKKMAQKLAARNALAVLK 1828
              KK AQ++AA+   + LK
Sbjct: 1409 INKKSAQRMAAQIVCSSLK 1427



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 1809 NPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQT-LNDICLRRNW 1867
            N + K  +KL +  A       +T  +   G +   K   G++T + ++ L++IC    W
Sbjct: 1495 NFKSKSTRKLLSTEASVQCNSDQTIMSN--GSKEDAKATGGSKTESAKSRLHEICAANCW 1552

Query: 1868 PMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAA 1919
              PL+ C +E GP+H K FT+ V V   +     E  GE     K A + AA
Sbjct: 1553 KPPLFECCKETGPSHLKEFTFRVLVEIEETSRVIESYGEAQAKKKDAAEHAA 1604


>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
 gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
          Length = 1385

 Score =  339 bits (869), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 248/754 (32%), Positives = 372/754 (49%), Gaps = 112/754 (14%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P+ QAR YQL+ LE+A   NT+ FLETGAGKTLIAVLL+R   N ++       AVFLVP
Sbjct: 12   PQTQARWYQLEALERALAGNTLVFLETGAGKTLIAVLLLRRFANRIRSSPPPCFAVFLVP 71

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
             V LV QQA V+R  T   V  + GEMG DFW+A +W+   D  +VLVMT QILL+ LRH
Sbjct: 72   TVVLVSQQARVVRAHTDLTVAEFFGEMGVDFWNADKWRDMVDGAEVLVMTPQILLDNLRH 131

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKG 475
            S  ++  I LLI DECHHA    PY+ +  EFYH    +   +  P +FGMTAS +N K 
Sbjct: 132  SFFRLRDIPLLIFDECHHATGNSPYACIFKEFYHPQLNSRPSDPIPRIFGMTASLINSKD 191

Query: 476  VSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQ 535
            ++     ++KI  LE+ +++ V T+    EL +++P  +  ++EYD              
Sbjct: 192  LARD-KYSMKISELENLMNAKVYTVASESELLQYIPFATTRIIEYD-------------- 236

Query: 536  MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN-Y 594
             +  V+    S + R         D    + L  + G    +  + A   I+KL A+  Y
Sbjct: 237  -DYIVKSELYSHTIR-------CLDKLEAKHLEILKGKLHGSYLENAEKRIKKLNAMFLY 288

Query: 595  ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
             + +LG W A K A+     LQ+++                           E  VS   
Sbjct: 289  CISDLGVWLAAKAAE----ILQSNK---------------------------ESCVSFWG 317

Query: 655  AKVVDSENGFVEGGTNEI--EEGELLDSHVVSGGE-HVDVIIGAAVADGKVTPKVQSLIK 711
             K+ D   GF+     ++  E  E++      G + H+     A + DG +  KV  LIK
Sbjct: 318  EKLDDEVEGFIRNYIGDVNNELSEIILKMTKRGLQRHIGEDFDADLQDGLLKSKVYFLIK 377

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ- 770
             LL+Y+H +D R I+FV+RV+ ++VL  + + +  +S      + G N   + ++     
Sbjct: 378  SLLEYRHVQDLRCIVFVKRVITSIVLEALLSTINQMSGWSVRYMAGKNFGLQYQSRNTHV 437

Query: 771  ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            E +  FR G+V L++AT + EEGLD+  CN++IRFD A T +      G       D  +
Sbjct: 438  EIVDSFRSGKVHLIIATQILEEGLDVPSCNLIIRFDQAATNV----DGGCLFDGVRDTSV 493

Query: 831  MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV-----YQV 885
                G  ++A        +EE L    I R +   L+ T        +P T+     Y V
Sbjct: 494  FCFDGGDANAL-----SKTEEFLESGQIMREESQRLEST----FYQPLPNTLCNEEFYGV 544

Query: 886  ESTGAVVSLNSAVGLIHFYCSQLPSDR-YSILRPE-----FIMERHEKPGGPTEY----- 934
            +STGA+V+LNS+V LI+F+CS+LPSD     LR +     FI +       P        
Sbjct: 545  QSTGAIVTLNSSVQLIYFFCSKLPSDESVFFLRLDNVFFWFIQQNISWYFNPLPRFNIDK 604

Query: 935  ---SCKLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG 989
               +C L LP ++P + +  EG +     + ++ VCL AC++LH +GA TD LLP+    
Sbjct: 605  ALGTCTLHLPMSSPVQTIYAEGEI----SIIKRVVCLNACRELHAVGALTDYLLPESSVP 660

Query: 990  EQQEK---VDQNDEGEPLPGTARHREFYPEGVAD 1020
             + E    VD+  E +P        +++PE + D
Sbjct: 661  CEDEPDIVVDKYKEEQP--------DYFPEQLMD 686



 Score =  291 bits (746), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 307/617 (49%), Gaps = 100/617 (16%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV+  H+G  + V  +  ++ A S  P +E  L      SY  ++K+ +G++L  +
Sbjct: 853  LQNSIVSTPHNGMLYAVSGLLLDLNANS--PMRESVL------SYKTHFKESHGLDLKCE 904

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI--HPLPGSLV 1352
             QPL+R   +   +N+L    E + ++E E   + +      LPPELC +   P+  + +
Sbjct: 905  DQPLLRASKLVKVRNILH---ERNYKKEKESTNVFE------LPPELCIVVMAPVSANTL 955

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
            R    +PSIM R++ MLL++ LK ++      + +PA K+LEALTA  C+E F  E  E 
Sbjct: 956  RCFTFIPSIMYRIQCMLLSVNLKTQLGPSMKQFDIPALKVLEALTAKKCKEEFSQESLET 1015

Query: 1408 LGDAYLK-WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
            LGD++LK W  +                     +V+  +L+    S   + YI+++ F P
Sbjct: 1016 LGDSFLKAWAFA--------------------AVVNCGILFLLWRSDQAKGYIRSETFNP 1055

Query: 1467 SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS 1526
              W  PGV                        D  G                       S
Sbjct: 1056 ETWIIPGV----------------------GNDSCG----------------------RS 1071

Query: 1527 YRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESV 1586
             R L SK +AD VEALIG Y    G+ AA   +K +G+ +E     V    R   +  + 
Sbjct: 1072 LRKLKSKRIADSVEALIGAYLSAAGEQAAYLFLKSLGMDIEFHKMPV---ERKITI--NA 1126

Query: 1587 LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
               ++  +LE  L   F D  LL+EA+TH S   +G + CYQRLEF+GDAVLDH+ T + 
Sbjct: 1127 ENFINLRSLELMLDYNFSDPSLLLEALTHGSYQIAGTTACYQRLEFLGDAVLDHIFTDYF 1186

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            +  Y    P  LTDLR+A+VNN  +A  AVK  LH H+ H SSAL +++ D++ +  +  
Sbjct: 1187 YHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHILHSSSALHKKMADYLDKFEQSF 1246

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
              P  + +  G C  PKVLGD++ESIAGAI++D+  D  VVW+  + LL+P+ TP+TL +
Sbjct: 1247 SGPS-HGWEAGIC-LPKVLGDVIESIAGAIYIDTKNDKKVVWRKMKRLLEPLATPDTLEI 1304

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLAT--VEVYIDGVQVGVAQNP-QKKMAQKLAARN 1822
             PV+EL E C  +   ++Y  +R   + +  VEV   G      +    K+ A+KLAA++
Sbjct: 1305 DPVKELHEFCDPKTCSIKYTVAREDRVTSVAVEVQTKGTTYKATRTGLTKRDAKKLAAKS 1364

Query: 1823 ALAVLKEKETAEAKEKG 1839
             L  +K   + +    G
Sbjct: 1365 VLKDMKAANSTQHFANG 1381


>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
          Length = 1374

 Score =  338 bits (868), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 58/559 (10%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            +Y +YY++++G++L F  +PL+ GR +    + L     H  +++ E E   D+ + V L
Sbjct: 861  TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL-----HMAKKKKEKEH--DREF-VEL 912

Query: 1338 PPELC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAA 1394
            PPELC   + P+   ++     +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T  
Sbjct: 913  PPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTK 972

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C++ F  E  E LGD++LK+ V + LF      HEG L+  +  M+SN++L Q+   + 
Sbjct: 973  KCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQK 1032

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ +I+ + F P  W  PG             S+ +    S+  D L   +N        
Sbjct: 1033 LQGFIRDECFEPKGWMVPG-----------QSSAAY----SLVNDTLPESRNIY------ 1071

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                      +S R L  K++ADVVE+LIG Y  EGG+ AA   M W+GI+V+    ++ 
Sbjct: 1072 ---------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQ 1122

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
              S     P    + V+   +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+G
Sbjct: 1123 RDS-----PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLG 1177

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD+LITKHL+  Y  L PG LTD+R+A+VNNE +A VAVK  LH H+ + S  L + 
Sbjct: 1178 DSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKH 1237

Query: 1694 IRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            I   V E  +  L+   ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +P
Sbjct: 1238 ISRTVSEFEQSSLQ---STFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKP 1294

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ- 1811
            LL  M+TPET+ +HPVREL E CQ+     +++ S++ +  +  V +   ++  A   + 
Sbjct: 1295 LLGCMITPETVKLHPVRELTELCQKW----QFELSKAKDFDSFTVEVKAKEMSFAHTAKA 1350

Query: 1812 --KKMAQKLAARNALAVLK 1828
              KKMA+KLA +  L +LK
Sbjct: 1351 SDKKMAKKLAYKEVLNLLK 1369



 Score =  308 bits (790), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 236/665 (35%), Positives = 352/665 (52%), Gaps = 102/665 (15%)

Query: 354  AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
            A FLV       QQAE ++  T   VG Y G+MG DFWD+  W++E D  +VLVMT  IL
Sbjct: 63   AFFLV----CFTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAIL 118

Query: 414  LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASP 470
            L+ LRHS + +  I +LI+DECHHA  KHPY+ +M EFYH    +     P +FGMTAS 
Sbjct: 119  LDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASL 178

Query: 471  VNLKGVSSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPM--PSEVVVEYDKAAS-- 525
            V  KG    +D   K I  LE+ ++S V T ++   L   VP   PS    ++ K  S  
Sbjct: 179  VKTKG--ENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPK 236

Query: 526  LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANL 585
              SL E+L+++ +          R S    +G  D  +      V  V +R        L
Sbjct: 237  RASLVEKLERLTI--------KHRLS----LGTLDLNSS----TVDSVEKR--------L 272

Query: 586  IQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
            ++    + Y L +LG   A K AQS L+A QND             S+L   +++    L
Sbjct: 273  LRISSTLTYCLDDLGILLAQKAAQS-LSASQND-------------SFLWGELNMFSVAL 318

Query: 646  VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPK 705
            V+   S       D+   F+     EI +G  L+  V +       I G A A G +T K
Sbjct: 319  VKKFCS-------DASQEFLA----EIPQG--LNWSVAN-------INGNAEA-GLLTLK 357

Query: 706  VQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEM 764
               LI+ LL Y   E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + 
Sbjct: 358  TVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQN 417

Query: 765  RTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            +T + Q E +  FR G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR 
Sbjct: 418  QTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARM 477

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG--- 880
              SDY++M+E G+L   +      +  + +R+E+++ +          L+    +P    
Sbjct: 478  QNSDYLMMVESGDLLTQSRSMKYLSGGKRMREESLDHS----------LVPCPPLPDDSD 527

Query: 881  -TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              +++VESTGA V+L+S+V LI+ YCS+LPSD Y    P F + + +        SC L 
Sbjct: 528  EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLY 580

Query: 940  LPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKV 995
            LP + P ++++    ++ ++ +QAVCL AC +LH++GA +D L+PD    E    + EK+
Sbjct: 581  LPKSCPVKEVKAE--ANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKI 638

Query: 996  DQNDE 1000
              N E
Sbjct: 639  QYNTE 643


>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
 gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
          Length = 1374

 Score =  338 bits (868), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 58/559 (10%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            +Y +YY++++G++L F  +PL+ GR +    + L     H  +++ E E   D+ + V L
Sbjct: 861  TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL-----HMAKKKKEKEH--DREF-VEL 912

Query: 1338 PPELC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAA 1394
            PPELC   + P+   ++     +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T  
Sbjct: 913  PPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTK 972

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C++ F  E  E LGD++LK+ V + LF      HEG L+  +  M+SN++L Q+   + 
Sbjct: 973  KCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQK 1032

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ +I+ + F P  W  PG             S+ +    S+  D L   +N        
Sbjct: 1033 LQGFIRDECFEPKGWMVPG-----------QSSAAY----SLVNDTLPESRNIY------ 1071

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                      +S R L  K++ADVVE+LIG Y  EGG+ AA   M W+GI+V+    ++ 
Sbjct: 1072 ---------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQ 1122

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
              S     P    + V+   +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+G
Sbjct: 1123 RDS-----PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLG 1177

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD+LITKHL+  Y  L PG LTD+R+A+VNNE +A VAVK  LH H+ + S  L + 
Sbjct: 1178 DSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKH 1237

Query: 1694 IRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            I   V E  +  L+   ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +P
Sbjct: 1238 ISRTVSEFEQSSLQ---STFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKP 1294

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ- 1811
            LL  M+TPET+ +HPVREL E CQ+     +++ S++ +  +  V +   ++  A   + 
Sbjct: 1295 LLGCMITPETVKLHPVRELTELCQKW----QFELSKAKDFDSFTVEVKAKEMSFAHTAKA 1350

Query: 1812 --KKMAQKLAARNALAVLK 1828
              KKMA+KLA +  L +LK
Sbjct: 1351 SDKKMAKKLAYKEVLNLLK 1369



 Score =  311 bits (797), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 237/665 (35%), Positives = 353/665 (53%), Gaps = 102/665 (15%)

Query: 354  AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
            A FLV       QQAE ++  T   VG Y G+MG DFWD+  W++E D  +VLVMT  IL
Sbjct: 63   AFFLV----CFTQQAEALKMHTDLKVGMYWGDMGVDFWDSSTWKQEVDKYEVLVMTPAIL 118

Query: 414  LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASP 470
            L+ LRHS + +  I +LI+DECHHA  KHPY+ +M EFYH    +     P +FGMTAS 
Sbjct: 119  LDALRHSFLSLSMIKVLIVDECHHAGGKHPYACIMREFYHKELNSGTSNVPRIFGMTASL 178

Query: 471  VNLKGVSSQVDCAIK-ICNLESKLDSVVCTIKDRKELEKHVPM--PSEVVVEYDKAAS-- 525
            V  KG    +D   K I  LE+ ++S V T ++   L   VP   PS    ++ K  S  
Sbjct: 179  VKTKG--ENLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPK 236

Query: 526  LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANL 585
              SL E+L+++ +          R S    +G  D  +      V  V +R        L
Sbjct: 237  RASLVEKLERLTI--------KHRLS----LGTLDLNSS----TVDSVEKR--------L 272

Query: 586  IQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
            ++    + Y L +LG   A K AQS L+A QND             S+L   +++    L
Sbjct: 273  LRISSTLTYCLDDLGILLAQKAAQS-LSASQND-------------SFLWGELNMFSVAL 318

Query: 646  VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPK 705
            V+   S       D+   F+     EI +G  L+  V +       I G A A G +T K
Sbjct: 319  VKKFCS-------DASQEFLA----EIPQG--LNWSVAN-------INGNAEA-GLLTLK 357

Query: 706  VQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEM 764
               LI+ LL Y   E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + 
Sbjct: 358  TVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQN 417

Query: 765  RTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            +T + Q E +  FR G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR 
Sbjct: 418  QTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARM 477

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG--- 880
              SDY++M+E G+L   + L    +  + +R+E+++ +          L+    +P    
Sbjct: 478  QNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHS----------LVPCPPLPDDSD 527

Query: 881  -TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              +++VESTGA V+L+S+V LI+ YCS+LPSD Y    P F + + +        SC L 
Sbjct: 528  EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLY 580

Query: 940  LPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKV 995
            LP + P ++++    ++ ++ +QAVCL AC +LH++GA +D L+PD    E    + EK+
Sbjct: 581  LPKSCPVKEVKAE--ANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKI 638

Query: 996  DQNDE 1000
              N E
Sbjct: 639  QYNTE 643


>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
          Length = 2042

 Score =  338 bits (866), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 208/559 (37%), Positives = 315/559 (56%), Gaps = 58/559 (10%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            +Y +YY++++G++L F  +PL+ GR +    + L     H  +++ E E   D+ + V L
Sbjct: 1529 TYIEYYEERHGIQLNFVDEPLLNGRHIFTLHSYL-----HMAKKKKEKEH--DREF-VEL 1580

Query: 1338 PPELC--FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAA 1394
            PPELC   + P+   ++     +PS+M+R+ES+L+A  LK  I    +P  K+LEA+T  
Sbjct: 1581 PPELCHVILSPISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKVNIPTIKVLEAITTK 1640

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C++ F  E  E LGD++LK+ V + LF      HEG L+  +  M+SN++L Q+   + 
Sbjct: 1641 KCEDQFHLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQK 1700

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ +I+ + F P  W  PG             S+ +    S+  D L   +N        
Sbjct: 1701 LQGFIRDECFEPKGWMVPG-----------QSSAAY----SLVNDTLPESRNIY------ 1739

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                      +S R L  K++ADVVE+LIG Y  EGG+ AA   M W+GI+V+    ++ 
Sbjct: 1740 ---------VASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDFTTTKIQ 1790

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
              S     P    + V+   +E  L   F+D+ LLVEA+TH S     +  CYQRLEF+G
Sbjct: 1791 RDS-----PIQAEKLVNVGYMESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLG 1845

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD+LITKHL+  Y  L PG LTD+R+A+VNNE +A VAVK  LH H+ + S  L + 
Sbjct: 1846 DSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKH 1905

Query: 1694 IRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
            I   V E  +  L+   ++FG   D   PKVLGD++ES+AGAIF+DSG +  VV+   +P
Sbjct: 1906 ISRTVSEFEQSSLQ---STFGWESDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKP 1962

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ- 1811
            LL  M+TPET+ +HPVREL E CQ+     +++ S++ +  +  V +   ++  A   + 
Sbjct: 1963 LLGCMITPETVKLHPVRELTELCQKW----QFELSKAKDFDSFTVEVKAKEMSFAHTAKA 2018

Query: 1812 --KKMAQKLAARNALAVLK 1828
              KKMA+KLA +  L +LK
Sbjct: 2019 SDKKMAKKLAYKEVLNLLK 2037



 Score =  296 bits (759), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 238/711 (33%), Positives = 355/711 (49%), Gaps = 155/711 (21%)

Query: 300  PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
            P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L+RS    L R+      VFLVP
Sbjct: 746  PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAY-LFRKPSPCFCVFLVP 804

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            +V LV QQAE ++  T                       +    QVLVMT  ILL+ LRH
Sbjct: 805  QVVLVTQQAEALKMHT-----------------------DLKVVQVLVMTPAILLDALRH 841

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            S + +  I +LI+DECHHA  KHPY+ +M                               
Sbjct: 842  SFLSLSMIKVLIVDECHHAGGKHPYACIMR------------------------------ 871

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
                +  C  ES L   V       +  +H+ +PS       K ASL    E+L+++ + 
Sbjct: 872  ----VYTCENESVLAGFVPFSTPSFKYYQHIKIPSP------KRASLV---EKLERLTI- 917

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
                     R S    +G  D  +      V  V +R        L++    + Y L +L
Sbjct: 918  -------KHRLS----LGTLDLNSS----TVDSVEKR--------LLRISSTLTYCLDDL 954

Query: 600  GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
            G   A K AQS L+A QND             S+L   +++    LV+   S       D
Sbjct: 955  GILLAQKAAQS-LSASQND-------------SFLWGELNMFSVALVKKFCS-------D 993

Query: 660  SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHT 719
            +   F+     EI +G  L+  V +       I G A A G +T K   LI+ LL Y   
Sbjct: 994  ASQEFLA----EIPQG--LNWSVAN-------INGNAEA-GLLTLKTVCLIETLLGYSSL 1039

Query: 720  EDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFR 777
            E+ R IIFV+RV+ A+VL  + AE LP+ +  K+  + G+N+  + +T + Q E +  FR
Sbjct: 1040 ENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNNSGLQNQTRKKQNEIVEDFR 1099

Query: 778  DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
             G V ++VATS+ EEGLD++ CN+VIRFD A  + ++IQSRGRAR   SDY++M+E G+L
Sbjct: 1100 RGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSRGRARMQNSDYLMMVESGDL 1159

Query: 838  SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG----TVYQVESTGAVVS 893
               + L    +  + +R+E+++ +          L+    +P      +++VESTGA V+
Sbjct: 1160 LTQSRLMKYLSGGKRMREESLDHS----------LVPCPPLPDDSDEPLFRVESTGATVT 1209

Query: 894  LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
            L+S+V LI+ YCS+LPSD Y    P F + + +        SC L LP + P ++++   
Sbjct: 1210 LSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKDQG-------SCTLYLPKSCPVKEVKAE- 1261

Query: 954  CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE----QQEKVDQNDE 1000
             ++ ++ +QAVCL AC +LH++GA +D L+PD    E    + EK+  N E
Sbjct: 1262 -ANNKVLKQAVCLKACIQLHKVGALSDHLVPDMVVAETVSQKLEKIQYNTE 1311


>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
            Full=Dicer-like protein 2b; Short=OsDCL2b
          Length = 1377

 Score =  337 bits (865), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 240/734 (32%), Positives = 366/734 (49%), Gaps = 136/734 (18%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34   ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94   VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
            ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K + +Q
Sbjct: 154  LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDL-NQ 212

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
             + + +I  +E+ ++S V T+     L +++P  S  +V +D +     LH  +      
Sbjct: 213  HNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANI------ 266

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL-RAINYALGE 598
                  S   R   + + A D       R+++G S     + A   I KL R   Y L  
Sbjct: 267  -----LSCLNRLTKKHIEALD-------RKLHGSS----LENAKQRISKLHRTFVYCLYN 310

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG W A K A+     +Q+ E  +    + F    L K         VEG +     +V 
Sbjct: 311  LGVWLAAKAAE-----VQSYEENS----LSFWGETLDKN--------VEGFIRNYSEEVH 353

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
               + F++ G                   H+     A   DG +TPKV  LI+ LL+Y+H
Sbjct: 354  RELSCFLKNG-------------------HIGEKFPADSQDGILTPKVHCLIRTLLQYRH 394

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIAK 775
             +D R I+FV+RV+ ++VL  + + +  +S      + G      SQ  +     E +  
Sbjct: 395  MQDLRCIVFVQRVITSIVLEPLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNH--TEIVES 452

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ RG
Sbjct: 453  FRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRG 512

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVEST 888
            ++   T  +    S + +R+E++            RL S+   P        T Y+VEST
Sbjct: 513  DVEAHTNAKKFLASGQIMREESL------------RLGSISCQPLENTLCEDTYYRVEST 560

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
             A   ++ A G                                   +C L LP ++P + 
Sbjct: 561  PA-FDIDKASG-----------------------------------TCTLHLPKSSPVQT 584

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPG 1006
            +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P   
Sbjct: 585  VN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP--- 639

Query: 1007 TARHREFYPEGVAD 1020
                  ++PE   D
Sbjct: 640  -----SYFPEEFVD 648



 Score =  334 bits (857), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 218/606 (35%), Positives = 327/606 (53%), Gaps = 67/606 (11%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 815  LKNSIVCTPHNNI-FYVISGFLDLDANSRLPQHDGTV-----VTYKDYFKTRHGLTLTFE 868

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 869  NQPLLAGSKHVKVRNFLHNYYYKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 921

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 922  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 981

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 982  LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 1041

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +      F          L  +  Y++ +                
Sbjct: 1042 DW----IIPCLDYDERGNKKISF----------LAPNGMYSQRKMS-------------- 1073

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 1074 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 1129

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              +D  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 1130 --IDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1187

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  ++    +   
Sbjct: 1188 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLG---QSFT 1244

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 1245 GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 1301

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG--VQVGVAQNPQKKMAQKLAARNA 1823
             PV+ LQE C +++  + Y+ +    +++V   +          ++   K+A+KLA++  
Sbjct: 1302 DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLAKKLASK-- 1359

Query: 1824 LAVLKE 1829
             AVLK+
Sbjct: 1360 -AVLKD 1364


>gi|357131511|ref|XP_003567380.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
            distachyon]
          Length = 1183

 Score =  337 bits (865), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 235/644 (36%), Positives = 341/644 (52%), Gaps = 53/644 (8%)

Query: 1211 MQIHNADMPTGKLM-MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEG 1269
            + I + D   G L+ +A++      L    V A H+GK +    +  +++A S+F   +G
Sbjct: 409  LAILDFDQIYGDLIHLANTSCEVHTLRNVAVLAVHTGKIYTALHVT-DLSANSTF---DG 464

Query: 1270 YLGPLE--YSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGE- 1326
                 E  + ++ +Y+++KY + L    QPL+  +      NLLS +        GE + 
Sbjct: 465  VSSKKESGFKTFTEYFEKKYDIVLRHPSQPLLVLKPSHNPHNLLSSKIRDEGPCYGENKN 524

Query: 1327 ----EILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP- 1381
                +++     V +PPEL     LP  ++R     PS+M R+E+++LA QL+ +I Y  
Sbjct: 525  DGTTDVIKVNNRVHMPPELLIPLNLPEDILRAFYLFPSLMYRMETLMLASQLRSEIAYDS 584

Query: 1382 -VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
             + +  ILEA+T   C E F  ER ELLGD+ LK+ VS  LFLK+P KHEGQL+  R  +
Sbjct: 585  NISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPDKHEGQLSSSRIDI 644

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV---------LPVFDEDTKDGDSSLFD 1491
            +SN  L++  +   +Q YI+   F P RW APG           PV D +    D  + D
Sbjct: 645  ISNAALHRLGIKHKIQGYIRDAAFDPRRWLAPGQRTNRPFHCKCPV-DYEVVTKDIHVID 703

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
            ++ ++   K+G                  +     +R + SKT++D VEA+IG YYV GG
Sbjct: 704  EKPTI---KIG------------------QACDKGHRWMCSKTISDCVEAIIGAYYVGGG 742

Query: 1552 KDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
              AA  +++W+G+  E + E +      A +   V +     ALE  L   F  +GLL+E
Sbjct: 743  LRAAVAVLRWLGVDAEIEEELIMQTILSASMKTYVPKIDLVEALEAKLGYAFSVKGLLLE 802

Query: 1612 AITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            A+TH S + S     Y+RLEF+GDA LD L+T HLF S+ +   G LTDLR+A+VNNENF
Sbjct: 803  ALTHPSHQESEERYSYERLEFLGDAALDILLTWHLFSSHKDTDEGELTDLRSASVNNENF 862

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVES 1730
            A+VAVKHKLH  L+  S  L  QI ++    LE       N       + PKVLGDIVES
Sbjct: 863  AKVAVKHKLHHFLQQSSGILLDQITEYANS-LENSSMDEINLSSDAPLRGPKVLGDIVES 921

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG 1790
            IAGAI +D+  D  VV  VF+PLL P+VTPE L + P REL E C +    L  K +   
Sbjct: 922  IAGAILIDTKLDLDVVRGVFKPLLSPIVTPENLELPPFRELLEWCNKNGYFLGIKCTDGD 981

Query: 1791 NL-ATVEVYIDGVQV---GVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A ++V ++ V V   G  +N  KK A+  AA   L  L+EK
Sbjct: 982  KIQAILDVQLEDVLVIRRGFGKN--KKDAKAHAASMLLKDLEEK 1023



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 833 ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG--- 889
           +R N     F     ++E+     AI R+  S ++      S D +P      +  G   
Sbjct: 55  KRQNTECQDFTPRGVDAEQNNLASAISRSKTSMVETAFNRDSKDLLPHLSPVKDRNGCHI 114

Query: 890 --AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
             A  +++S++ +I  YC +LP D+Y   RP F    H+       + C L LP +    
Sbjct: 115 GTAGATVDSSISIISEYCDKLPKDKYHTTRPSFEFTHHDD-----GFVCTLTLPSSDVLP 169

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            LEGP   S + A+Q VCL ACK+L  +G   D L P
Sbjct: 170 PLEGPKARSKQKAKQLVCLDACKQLDLLGVHDDCLCP 206


>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
 gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
          Length = 1291

 Score =  337 bits (863), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 248/782 (31%), Positives = 378/782 (48%), Gaps = 140/782 (17%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQL+VLE+  K+NTI FLETGAGKT IA +L   + + L    +K + VFL P V L  Q
Sbjct: 2    YQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALADQ 61

Query: 367  QAEVIREQTGYVVGHYCGEMGQ-DFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKME 425
            QA VI   T   VG Y G  GQ D WD ++W  E D+ QVLVMTAQ+L N L+ S I+ME
Sbjct: 62   QANVISSSTRLKVGIYHG--GQMDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRME 119

Query: 426  AINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIK 485
             I +LI DECH A   HPY+ VM  +                                  
Sbjct: 120  MIEVLIFDECHRAQNNHPYASVMKIY---------------------------------- 145

Query: 486  ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQ 545
                         TI  R ELE+ VP P    + YDKA      H   K++         
Sbjct: 146  -------------TITSRAELEEKVPTPFYRNLYYDKA------HHCFKEL--------- 177

Query: 546  SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
               RR     +        +++  +  + E  +    +NL     AI   L +LG W A 
Sbjct: 178  ---RRCLTDLL--------DKVNVIVYLDENKKRSKFSNLYN---AITSCLLDLGLWSAV 223

Query: 606  KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
             V +    A+   E                 V+  +  E  + +V  +D    + E  F+
Sbjct: 224  LVKKLHFLAVLAVE-----------------VLLKIDPEGTKPSVENEDK---NDEQRFL 263

Query: 666  EGGTNEIEEGELLDSHVVSGGEHVDVIIGA-----AVADGKVTPKVQSLIKILLKYQHTE 720
            +   N      +L S V   G+ V  I        AV  G +T KV++L+KIL++Y++ E
Sbjct: 264  KEAYN------ILKSFV--PGDSVSSISSPEDAKKAVNSGLITSKVKALLKILVRYRNVE 315

Query: 721  DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGR 780
             FR +IFVERVV   VL ++ +   ++ F ++  ++G   + +  T +  ET+  F+ G 
Sbjct: 316  PFRCMIFVERVVVTQVLARLLSTFKAIDFCRTGYIVG--VTADGNTTKHVETVKAFKSGE 373

Query: 781  VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
            + +L+ TSVAEEGLD++ CN V+RFD+ +T+ ++IQSRGR RK  + Y+ ++ERGNL   
Sbjct: 374  LNVLICTSVAEEGLDVQSCNCVVRFDICRTLRSFIQSRGRGRKRDATYMFLLERGNLEQE 433

Query: 841  TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
            + L    NSEE +R EA+ R  +S   + + LI  D      +   ++GA +S + AV  
Sbjct: 434  SLLMELVNSEELMRAEALSR--MSKTIEITPLIDAD----LDFFYTTSGACISTDGAVSF 487

Query: 901  IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLA 960
            I+ YCSQLP DR+   +PE  + + E       +SC +  P NAP   L G    + +LA
Sbjct: 488  IYRYCSQLPGDRFYNPKPEIEVTKCESDNEEL-FSCTITFPPNAPLHVLTGLPKRNKQLA 546

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
            ++  CL AC++L  +GA  +   P+     ++EK+    EG P  G+ + +E +P   + 
Sbjct: 547  KKVACLEACRQLDALGALGERHPPEV----REEKM--ASEG-PGLGSTKLKELFPSIKST 599

Query: 1021 ILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS 1080
              Q +WI +  D      + H++        NG       +  ++F +LF + LD ++ +
Sbjct: 600  TYQRQWITTSTD-----IVLHIYALIFHPEENG-------STYTNFGLLFDAALDDDVGN 647

Query: 1081 LK 1082
            ++
Sbjct: 648  IE 649



 Score =  290 bits (742), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 187/454 (41%), Positives = 256/454 (56%), Gaps = 34/454 (7%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S+ILEA T+  CQ+ F YE  ELLGD+ LK+ V+R L+L +   HEG+L+  R   + N 
Sbjct: 849  SQILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNS 908

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
             L + A+++ L  Y++ + F PS W   G+   + + ++     L +     +     TD
Sbjct: 909  TLRKLAVAQDLPMYVRDEPFYPSCWVGAGM---YRQRSRKCCCRLDNLVTKESSKPRPTD 965

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
              Y  Y       G        +R + SKT +D +EALIG Y V GG D A   MK + +
Sbjct: 966  ATY--YVGKTCGQG--------HRWMCSKTTSDALEALIGAYAVGGGFDGALEFMKALQV 1015

Query: 1565 QVESDPEEVGCPS-RPACVPESVLRSVDFH-----ALEDALKIKFKDRGLLVEAITHASR 1618
             V+ D   +     RP  VP   L +V FH     +LE  L   F+++ LL+EAITHAS 
Sbjct: 1016 DVDFDSGLIAASQHRP--VP---LDAVQFHMPALLSLEKELCYTFQNKALLLEAITHAST 1070

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
            P + V CYQRLEF+GDAVLD L+T+HLF S+  L PG L+DLR+A+VNN+  ARVAVKH+
Sbjct: 1071 PDT-VFCYQRLEFIGDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHR 1129

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN-SFGLGDCKAPKVLGDIVESIAGAIFL 1737
            LH +LRHGS+ L  +I  F+ +VL+    P  +  FG      PK L DIVES+AGAI +
Sbjct: 1130 LHSYLRHGSAELRAKITSFL-DVLDR--DPECSVMFGFKALSGPKALADIVESVAGAILV 1186

Query: 1738 DSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV 1797
            DSG D   +W V + LL P VTP TL  HPVRE  E C  ++   E+  S SG  AT E+
Sbjct: 1187 DSGFDFEKLWVVLKRLLSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSSSG--ATAEI 1244

Query: 1798 YIDGVQ---VGVAQNPQKKMAQKLAARNALAVLK 1828
             +   +     V+    KK A+K  A   L +LK
Sbjct: 1245 LLKAGEQRFTEVSSIKNKKDARKDVAEKLLTMLK 1278


>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
 gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
          Length = 1375

 Score =  336 bits (861), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 239/734 (32%), Positives = 365/734 (49%), Gaps = 138/734 (18%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34   ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94   VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
            ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K + +Q
Sbjct: 154  LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDL-NQ 212

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
             + + +I  +E+ ++S V T+     L +++P  S  +V +D +     LH  +      
Sbjct: 213  HNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVHFDDSNISSELHANI------ 266

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL-RAINYALGE 598
                  S   R   + + A D       R+++G S     + A   I KL R   Y L  
Sbjct: 267  -----LSCLNRLTKKHIEALD-------RKLHGSS----LENAKQRISKLHRTFVYCLYN 310

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG W A K A+     +Q+ E  +    + F    L K         VEG +     +V 
Sbjct: 311  LGVWLAAKAAE-----VQSYEENS----LSFWGETLDKN--------VEGFIRNYSEEVH 353

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
               + F++ G                   H+     A   DG +TPKV  LI+ LL+Y+H
Sbjct: 354  RELSCFLKNG-------------------HIGEKFPADSQDGILTPKVHCLIRTLLQYRH 394

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIAK 775
             +D R I+FV+RV+ ++VL  + + +  +S      + G      SQ  +     E +  
Sbjct: 395  MQDLRCIVFVQRVITSIVLEPLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNH--TEIVES 452

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ RG
Sbjct: 453  FRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRG 512

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVEST 888
            ++   T  +    S + +R+E++            RL S+   P        T Y+VEST
Sbjct: 513  DVEAHTNAKKFLASGQIMREESL------------RLGSISCQPLENTLCEDTYYRVEST 560

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
              +                                  +K  G    +C L LP ++P + 
Sbjct: 561  FDI----------------------------------DKASG----TCTLHLPKSSPVQT 582

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPG 1006
            +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P   
Sbjct: 583  VN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP--- 637

Query: 1007 TARHREFYPEGVAD 1020
                  ++PE   D
Sbjct: 638  -----SYFPEEFVD 646



 Score =  334 bits (857), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 218/606 (35%), Positives = 327/606 (53%), Gaps = 67/606 (11%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 813  LKNSIVCTPHNNI-FYVISGFLDLDANSRLPQHDGTV-----VTYKDYFKTRHGLTLTFE 866

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 867  NQPLLAGSKHVKVRNFLHNYYYKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 919

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 920  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 979

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 980  LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 1039

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +      F          L  +  Y++ +                
Sbjct: 1040 DW----IIPCLDYDERGNKKISF----------LAPNGMYSQRKMS-------------- 1071

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 1072 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 1127

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              +D  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 1128 --IDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1185

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  ++    +   
Sbjct: 1186 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLG---QSFT 1242

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 1243 GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 1299

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG--VQVGVAQNPQKKMAQKLAARNA 1823
             PV+ LQE C +++  + Y+ +    +++V   +          ++   K+A+KLA++  
Sbjct: 1300 DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLAKKLASK-- 1357

Query: 1824 LAVLKE 1829
             AVLK+
Sbjct: 1358 -AVLKD 1362


>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
          Length = 1371

 Score =  334 bits (857), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 241/727 (33%), Positives = 368/727 (50%), Gaps = 128/727 (17%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34   ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94   VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
            ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K ++  
Sbjct: 154  LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLNPH 213

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
             + + +I  +E+ ++S V T+     L +++P  S  +V++D +     LH  +      
Sbjct: 214  -NYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANI------ 266

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL-RAINYALGE 598
                  S   R   + + A D       R+++G S     + A   I KL     Y L  
Sbjct: 267  -----LSCLNRLNKKHIEALD-------RKLHGSS----LENAKQRISKLHHTFVYCLYN 310

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG W A K A+     +Q+ E  +    + F    L K         VEG +     +V 
Sbjct: 311  LGVWLAAKAAE-----VQSYEENS----LSFWGETLDKN--------VEGFIRNYSEEVH 353

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
               + F++ G                   H+     A   DG +TPKV  LI+ LL+Y+H
Sbjct: 354  RELSCFLKNG-------------------HIGEKFPADSQDGILTPKVHCLIRTLLQYRH 394

Query: 719  TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIAK 775
             +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E +  
Sbjct: 395  MQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNH--TEIVES 452

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ RG
Sbjct: 453  FRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRG 512

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLN 895
            ++   T      N+E+ L    I R      +++ RL S+   P     +E+T       
Sbjct: 513  DVEAQT------NAEKFLASGQIMR------EESLRLGSISCQP-----LENT------- 548

Query: 896  SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS 955
                    Y + LP  R+ I          +K  G    +C L LP ++P + +   V  
Sbjct: 549  -------LYFNPLP--RFDI----------DKASG----TCTLHLPKSSPVQTVN--VEG 583

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLPGTARHREF 1013
               + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P         +
Sbjct: 584  EGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP--------SY 635

Query: 1014 YPEGVAD 1020
            +PE   D
Sbjct: 636  FPEEFVD 642



 Score =  332 bits (852), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 217/606 (35%), Positives = 327/606 (53%), Gaps = 67/606 (11%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+   FYV S   ++ A S  P+ +G +      +Y DY+K ++G+ L F+
Sbjct: 809  LKNSIVCTPHNNI-FYVISGFLDLDANSRLPQHDGTV-----VTYKDYFKTRHGLTLTFE 862

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             QPL+ G      +N L   +   E++ G+        Y V LPPELC   + P+  + +
Sbjct: 863  NQPLLAGSKHVKVRNFLHNCYSKKEKEPGD-------RYSVELPPELCRIIMSPVSANNL 915

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R++ MLL+++LK ++      + VP  KILEALT   CQE F  E  E 
Sbjct: 916  HIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLET 975

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  L Q A S  L  YI A+ F P 
Sbjct: 976  LGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPR 1035

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             W    ++P  D D +      F          L  +  Y++ +                
Sbjct: 1036 DW----IIPCLDYDERGNKKISF----------LAPNGMYSQRKMS-------------- 1067

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
              + SK +AD VEALIG Y    G+ AA  LMK +G+ +E    E+    + +   E   
Sbjct: 1068 --IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFH-TEIPVERKISMKAEEF- 1123

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLEFVGDAVLDHLITKHLF 1646
              ++  +LE  L  KF D  LL+EA+TH S  +SG  SCYQRLEF+GDA+LDHL T++ +
Sbjct: 1124 --INVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYY 1181

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H SS L R++  ++    +   
Sbjct: 1182 SKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLG---QSFT 1238

Query: 1707 KPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P +    G+G    PKVLGD++ESIAGAI+LDS  D  VVW+  + LL+P+ TPET+  
Sbjct: 1239 GPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEP 1295

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG--VQVGVAQNPQKKMAQKLAARNA 1823
             PV+ LQE C +++  + Y+ +    +++V   +          ++   K+A+KLA++  
Sbjct: 1296 DPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLAKKLASK-- 1353

Query: 1824 LAVLKE 1829
             AVLK+
Sbjct: 1354 -AVLKD 1358


>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
          Length = 1623

 Score =  333 bits (855), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 239/733 (32%), Positives = 361/733 (49%), Gaps = 75/733 (10%)

Query: 297  EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
            +K P   AR YQL++ ++A ++N I ++ TG GKT IAVLLI ++   L R+ +K + VF
Sbjct: 40   KKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHAL-GHLIRKPQKNICVF 98

Query: 357  LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            L P V LV QQA VI E   + VG YCG   +       W++EF+  +V VMT QILL  
Sbjct: 99   LAPTVALVQQQARVIEESIDFKVGTYCGN-SRRLRTHHDWEKEFEQYEVFVMTPQILLRG 157

Query: 417  LRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            L H  I+ME I LLI DECHHA     HPY+ +M  FY T+S  + P +FGMTASPV  K
Sbjct: 158  LYHCFIRMELIALLIFDECHHAQVQSNHPYAEIMKVFYKTSST-RLPRIFGMTASPVVGK 216

Query: 475  GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
            G S Q +    I +LE+ L + V ++++++ELE+ V  P   V  Y    ++ S     K
Sbjct: 217  GASDQANLPKCINSLENLLHAKVYSVENQQELERFVASPKINVYCYHPDINMTS--STCK 274

Query: 535  QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
            ++E            +S+      R+    + LR    + +R       NLI       +
Sbjct: 275  KLE----------EIKSQCVLSLRRNVEDHKSLRSTKKLLQRMHD----NLI-------F 313

Query: 595  ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            ++  LG W A + ++  L+   + ER                       EL+E   S  D
Sbjct: 314  SMENLGLWGALQASRILLSG-DHAERN----------------------ELMEAEGSASD 350

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             ++ D    +++   N      +L S  +  G   D+     + +   + K+  LI IL 
Sbjct: 351  DRLCDK---YLDQSAN------VLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILS 401

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQETI 773
             ++   + + IIFV R+V A  L  +   L  LS+ K   L+G H+  + M    M   +
Sbjct: 402  TFRRQPNMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIIL 461

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             KFR   + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y  +++
Sbjct: 462  DKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 521

Query: 834  RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVS 893
             G       + + +  E+ +  E   RT      D             +Y+V+S+GA +S
Sbjct: 522  SGKQKEIDLIEHFKKDEDRMNMEISVRTSSEAFTDLEE---------RIYKVDSSGASIS 572

Query: 894  LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
               ++ L+H YCS+L  D Y   +PEF     +  GG     C++ LP +AP  ++    
Sbjct: 573  SVYSISLLHQYCSKLLHDEYFNPKPEFYY--FDDSGGTV---CQINLPSSAPIHQIVSTP 627

Query: 954  CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREF 1013
             SSM  A++  CL A + LH +GA  D LLPD+G+  ++  +  +D            E 
Sbjct: 628  QSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELMLVSSDSDSCEADEDSREEL 687

Query: 1014 YPEGVADILQGEW 1026
            +   V   L+  W
Sbjct: 688  HEMLVPAALKDSW 700



 Score =  324 bits (831), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 218/622 (35%), Positives = 326/622 (52%), Gaps = 58/622 (9%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            L +AD      D+   +V A +    F+V  I            + GY  P + SS+ +Y
Sbjct: 859  LRLADGVYRESDVINSLVYAPYKKAFFFVSRIS---------AGRNGY-SPYKDSSHLEY 908

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
              + +G+ L F KQPL+  + +   +NLL  R +H   +  E EE     +++ +PPELC
Sbjct: 909  TWKTFGIHLEFPKQPLLSAKRLFSLRNLLHNR-KHGSSESHELEE-----HFMDIPPELC 962

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVP------ASKILEALTAA 1394
             +  +  S   G+    LPSIM R+E++L+AI+LK+ ++   P      A ++LEALT  
Sbjct: 963  HLKIIGFSKDIGSSVSLLPSIMHRLENLLVAIELKNMLSASFPEGAEITAHRVLEALTTE 1022

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C E F  ER E+LGDA+LK+ V R LFL Y    EG+LTR R  +V+N  L++ A+ + 
Sbjct: 1023 KCLERFSLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRN 1082

Query: 1455 LQSYIQADRFAPSRWAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            LQ YI+   F P ++ A G   P   E  K+ + ++  +       ++   K        
Sbjct: 1083 LQVYIRDQSFDPGQFFALGHRCPRICE--KETEMAIHSRCGKTPTTEVRCSK-------- 1132

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                         +  L  KT+ADVVEAL+G + V+ G  AA   +KWIGIQV+ +  +V
Sbjct: 1133 ------------CHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVDFEAFQV 1180

Query: 1574 --GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
               C S  + +   +  S D  ALE  L  +F  +GLL++AI H S    G  CYQRLEF
Sbjct: 1181 INACISSTSYM--QLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYNKHGGGCYQRLEF 1238

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLD+LIT +L+  Y  L PG++TDLR+ +VNN++FA VAV   LH  L   +S+L 
Sbjct: 1239 LGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSLS 1298

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
              I+ +V  +    L    +       K PK LGD+VES  GAI LD G D +  W +  
Sbjct: 1299 EAIKKYVDFIRTPTLDKDLHE----GPKCPKALGDLVESCMGAILLDKGFDLNHAWNIML 1354

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG---VQVGVAQ 1808
             +LD +++   L ++P+RELQE CQ     L++  S+ G    VE  + G        A 
Sbjct: 1355 SILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQGGTFLVEAKVSGDDICTTASAT 1414

Query: 1809 NPQKKMAQKLAARNALAVLKEK 1830
            N  +K A+++A+      LK++
Sbjct: 1415 NANRKDARRIASNQLFKKLKDQ 1436



 Score = 42.7 bits (99), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 1854 TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTD-KGWTDECVGEPMPSVK 1912
            T+  + +IC    W  P + C +E GP+H K FT  + +   D  G   EC G P  + K
Sbjct: 1539 TKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECYGYPKSTKK 1598


>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
          Length = 1622

 Score =  333 bits (854), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 235/706 (33%), Positives = 355/706 (50%), Gaps = 75/706 (10%)

Query: 297 EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
           +K P   AR YQL++ ++A ++N I ++ TG GKT IAVLLI ++   L R+ +K + VF
Sbjct: 40  KKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHAL-GHLIRKPQKNICVF 98

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           L P V LV QQA VI E   + VG YCG   +       W++EF+  +V VMT QILL  
Sbjct: 99  LAPTVALVQQQARVIEESIDFKVGTYCGN-SRRLRTHHDWEKEFEQYEVFVMTPQILLRG 157

Query: 417 LRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           L H  I+ME I LLI DECHHA     HPY+ +M  FY T+S  + P +FGMTASPV  K
Sbjct: 158 LYHCFIRMELIALLIFDECHHAQVQSNHPYAEIMKVFYKTSST-RLPRIFGMTASPVVGK 216

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
           G S Q +    I +LE+ L + V ++++++ELE+ V  P   V  Y    ++ S     K
Sbjct: 217 GASDQANLPKCINSLENLLHAKVYSVENQQELERFVASPKINVYCYHPDINMTS--STCK 274

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
           ++E            +S+      R+    + LR    + +R       NLI       +
Sbjct: 275 KLE----------EIKSQCVLSLRRNVEDHKSLRSTKKLLQRMHD----NLI-------F 313

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           ++  LG W A + ++  L+   + ER                       EL+E   S  D
Sbjct: 314 SMENLGLWGALQASRILLSG-DHAERN----------------------ELMEAEGSASD 350

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
            ++ D    +++   N      +L S  +  G   D+     + +   + K+  LI IL 
Sbjct: 351 DRLCDK---YLDQSAN------VLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGILS 401

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQETI 773
            ++   + + IIFV R+V A  L  +   L  LS+ K   L+G H+  + M    M   +
Sbjct: 402 TFRRQPNMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNIIL 461

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            KFR   + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y  +++
Sbjct: 462 DKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVD 521

Query: 834 RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVS 893
            G       + + +  E+ +  E   RT      D             +Y+V+S+GA +S
Sbjct: 522 SGKQKEIDLIEHFKKDEDRMNMEISVRTSSEAFTDLEE---------RIYKVDSSGASIS 572

Query: 894 LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
              ++ L+H YCS+L  D Y   +PEF     +  GG     C++ LP +AP  ++    
Sbjct: 573 SVYSISLLHQYCSKLLHDEYFNPKPEFYY--FDDSGGTV---CQINLPSSAPIHQIVSTP 627

Query: 954 CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            SSM  A++  CL A + LH +GA  D LLPD+G+  ++  +  +D
Sbjct: 628 QSSMEAAKKDACLKAIQDLHVLGALNDYLLPDQGNAHEELMLVSSD 673



 Score =  324 bits (831), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 218/622 (35%), Positives = 326/622 (52%), Gaps = 58/622 (9%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            L +AD      D+   +V A +    F+V  I            + GY  P + SS+ +Y
Sbjct: 858  LRLADGVYRESDVINSLVYAPYKKAFFFVSRIS---------AGRNGY-SPYKDSSHLEY 907

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
              + +G+ L F KQPL+  + +   +NLL  R +H   +  E EE     +++ +PPELC
Sbjct: 908  TWKTFGIHLEFPKQPLLSAKRLFSLRNLLHNR-KHGSSESHELEE-----HFMDIPPELC 961

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVP------ASKILEALTAA 1394
             +  +  S   G+    LPSIM R+E++L+AI+LK+ ++   P      A ++LEALT  
Sbjct: 962  HLKIIGFSKDIGSSVSLLPSIMHRLENLLVAIELKNMLSASFPEGAEITAHRVLEALTTE 1021

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             C E F  ER E+LGDA+LK+ V R LFL Y    EG+LTR R  +V+N  L++ A+ + 
Sbjct: 1022 KCLERFSLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRN 1081

Query: 1455 LQSYIQADRFAPSRWAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            LQ YI+   F P ++ A G   P   E  K+ + ++  +       ++   K        
Sbjct: 1082 LQVYIRDQSFDPGQFFALGHRCPRICE--KETEMAIHSRCGKTPTTEVRCSK-------- 1131

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                         +  L  KT+ADVVEAL+G + V+ G  AA   +KWIGIQV+ +  +V
Sbjct: 1132 ------------CHHWLHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGIQVDFEAFQV 1179

Query: 1574 --GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
               C S  + +   +  S D  ALE  L  +F  +GLL++AI H S    G  CYQRLEF
Sbjct: 1180 INACISSTSYM--QLASSTDVPALEKLLGHEFLHKGLLLQAIVHPSYNKHGGGCYQRLEF 1237

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLD+LIT +L+  Y  L PG++TDLR+ +VNN++FA VAV   LH  L   +S+L 
Sbjct: 1238 LGDAVLDYLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSLS 1297

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
              I+ +V  +    L    +       K PK LGD+VES  GAI LD G D +  W +  
Sbjct: 1298 EAIKKYVDFIRTPTLDKDLHE----GPKCPKALGDLVESCMGAILLDKGFDLNHAWNIML 1353

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG---VQVGVAQ 1808
             +LD +++   L ++P+RELQE CQ     L++  S+ G    VE  + G        A 
Sbjct: 1354 SILDRIMSFSDLQLNPIRELQELCQHHNWDLQFPTSKQGGTFLVEAKVSGDDICTTASAT 1413

Query: 1809 NPQKKMAQKLAARNALAVLKEK 1830
            N  +K A+++A+      LK++
Sbjct: 1414 NANRKDARRIASNQLFKKLKDQ 1435



 Score = 42.7 bits (99), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 1854 TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTD-KGWTDECVGEPMPSVK 1912
            T+  + +IC    W  P + C +E GP+H K FT  + +   D  G   EC G P  + K
Sbjct: 1538 TKARMYEICAANYWKPPSFECCKEEGPSHLKLFTVKLTMKIEDGSGLLLECYGYPKSTKK 1597


>gi|168039663|ref|XP_001772316.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676303|gb|EDQ62787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1275

 Score =  333 bits (854), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 237/665 (35%), Positives = 332/665 (49%), Gaps = 121/665 (18%)

Query: 1239 IVTAAHSGKR--FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQ 1296
            ++   H+GKR  +    +  +M  +S    K       +Y+SY+DYY +K+   L F +Q
Sbjct: 367  LIQTEHTGKRCLYCARELIPDMNGQSPMIMKVS-----KYNSYSDYYLKKHNRTLNFVEQ 421

Query: 1297 PLIRGRGVSYCKNLLSPRFEH----SEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGS 1350
            P+++ + +    NLL+ R       +EEQ+ E          V LP ELC   +  L  +
Sbjct: 422  PMLKAKPLIQVNNLLTQRTTSERPAAEEQKTES--------LVELPLELCKIMVKGLSCA 473

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKI----NYPVPASKILEALTAASCQETFCYERAE 1406
            L  G   LPS M R+E +LLA+Q +  +    + PVPA+ +LEA+T + CQE+F  E  E
Sbjct: 474  LTNGISLLPSFMHRLEGLLLAVQFRKSLPSPHSSPVPANLMLEAITTSKCQESFSLEGLE 533

Query: 1407 LLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL----------- 1455
            LLGDA+L+  VS  LFL + +  EG+L++ R  ++ N +L +    +G+           
Sbjct: 534  LLGDAFLEVSVSERLFLLHNRLDEGELSKRRTNLICNKMLERLGRERGIMVSKSCRDTTR 593

Query: 1456 --------------QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
                          ++YI+  +F+P  WA P                             
Sbjct: 594  STYKQFEIMINLVSENYIRDTQFSPKEWATP----------------------------- 624

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKW 1561
                            G +         L  KT+ADV EALIG +Y+ GG +AA  +M W
Sbjct: 625  ----------------GRVRETQCKLPPLQGKTIADVFEALIGAHYIHGGVEAAQAMMGW 668

Query: 1562 IGIQV---ESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
            +G +V    S  EE             +L       LE  L  KF+++GLLVEA+THAS 
Sbjct: 669  LGCEVGVSSSIREEARTRVHGQL---ELLSEAKVSELEILLNYKFQNKGLLVEALTHASC 725

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP--PGRLTDLRAAAVNNENFARVAVK 1676
                  CYQRLEF+GDAVLD LITKH + +  NL   PG LTDLR+AAVNNE FARVAV+
Sbjct: 726  RRHSGDCYQRLEFLGDAVLDFLITKHFYANSANLKRDPGLLTDLRSAAVNNECFARVAVR 785

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIF 1736
            H LH++L H SS L  ++  +V     +    G+N    GD   PKVL D+VES+AGA+F
Sbjct: 786  HNLHLYLLHNSSDLAARVDKYVHGSTTDAQCHGWN----GD-SGPKVLSDLVESLAGAVF 840

Query: 1737 LDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEG-LEYKASRS--GNL- 1792
            LDSG     VW VF+ LL P+VTP TL + P+REL E CQ +  G   YK  R   G+  
Sbjct: 841  LDSGYKLDTVWNVFKQLLKPLVTPATLRLEPIRELWELCQTEKFGEPNYKKKREAMGDFD 900

Query: 1793 ATVEVYI-DGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQ 1851
             TV V + D    GV + P +K A+K+AA  AL  L        K  G E+G +R     
Sbjct: 901  MTVTVELKDETITGVGRKPDEKSARKVAAIQALETL--------KTLGYEHGSRRLERAA 952

Query: 1852 TFTRQ 1856
             + R+
Sbjct: 953  LYARK 957



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 142/347 (40%), Gaps = 67/347 (19%)

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            Y+ +  RGN   +  L     +EE++++E      LS +K+   + + +      ++VES
Sbjct: 9    YMSLFSRGNNEQSQRLEQFLLTEESMKEEV-----LSRIKNAEDVGAPETSTIETFRVES 63

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA +S   +V L+H YC++L  D +    P+F     E   G     C ++LP +A  +
Sbjct: 64   TGATMSTLCSVSLLHQYCARLAHDSFYTPTPQF--SYSEDGSG---VKCTIKLPTDALVQ 118

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
             +EG   SS   A++  CL AC++L++ GA T++LL      + +E     D   P   +
Sbjct: 119  SVEGRPVSSQADAKRVACLIACERLYDAGALTELLL-----LKSKENAYSLDAIAPESNS 173

Query: 1008 ARHREFYPEG---VADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVS 1064
               R+  P     V D   G W        +G     L  Y +  V       P      
Sbjct: 174  TTGRDPLPSRSIIVPDAFSGTW-------GSGLNSVELHAYAISFVAT-----PNDRAYV 221

Query: 1065 DFAVLFSSELDAELASL--------------------------------KNFHVRLMSIV 1092
            +F +   +++  E  S+                                K+F  R+ S V
Sbjct: 222  NFGLFLEADMGPEAGSIEVELQLSNRRLVNAKCSPCGTILFEPDQLRNAKSFQERIFSSV 281

Query: 1093 LD----VDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            LD    V     +  W+  + YL +P+   +   P++ +DWD +E +
Sbjct: 282  LDQKPPVPNIELSGEWNSNRLYLLLPLKEKQDALPLS-IDWDCIEDL 327



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKG--WTDECVGEPMPSVK 1912
            R  LN +C++  W  P+Y  V +GG +HA  F Y V+     +G  +  +  GE    +K
Sbjct: 1194 RSLLNAMCMKHRWGDPVYTLVSKGGVSHAPLFLYMVQTTIILRGRAFEIDAEGEVERDIK 1253

Query: 1913 KAKDSAAVLLLELLNK 1928
             AKDSAA  LLE L +
Sbjct: 1254 GAKDSAAARLLEWLGE 1269


>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 1636

 Score =  331 bits (849), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 277/899 (30%), Positives = 422/899 (46%), Gaps = 125/899 (13%)

Query: 287  GKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ 346
             +V    ++ +K P + AR YQL++ ++A ++N I +L TG GKT IAVLL+  +  DL 
Sbjct: 32   SQVKNHDDSVKKDPRKIARRYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMHEM-GDLI 90

Query: 347  RQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVL 406
            R+ +K + VFL P V LV+QQA+VI + T + VG YCG   +     Q W++E    +VL
Sbjct: 91   RKPQKNICVFLAPTVALVHQQAKVIADSTDFKVGTYCGS-SKRLKHHQDWEQEMGQYEVL 149

Query: 407  VMTAQILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVF 464
            VMT QIL + L H  I ME I LLI DECHHA  K  H Y+++M  FY + S  K P +F
Sbjct: 150  VMTPQILHHNLSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMKVFYKSNST-KVPRIF 208

Query: 465  GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA 524
            GMTASPV  KG SS+ + A  I +LE  LD+ V +++D KEL+  V  P   +  Y   A
Sbjct: 209  GMTASPVVGKGASSEANLAKSINSLEHILDAKVYSVED-KELQSFVTTPVINIYHYVSTA 267

Query: 525  S-LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAA 583
            S   SLH +++++            +R     +G          R +    +R  +    
Sbjct: 268  SGETSLHLKIEEI------------KRQCIATLG----------RSIEDHQKRMNTKKLL 305

Query: 584  NLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQC 643
            N +     + + L  LG W A + +   L+   + ER                       
Sbjct: 306  NRMHD--NVIFGLQNLGIWGALQASHILLSG-DHSERH---------------------- 340

Query: 644  ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
            ELVE   +  D  + D             +  EL  S  + G    D+     + +   +
Sbjct: 341  ELVEADGNSSDDSLCDKYLA---------QAAELFTSQCMIGILTFDLSSVEILKEPFFS 391

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQ 762
             K+  LI IL  ++  ++ + IIFV R+V A  L  +  +L  L   +S  L+G H   +
Sbjct: 392  AKLLRLIGILSNFRLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLK 451

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
             M    M   + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR
Sbjct: 452  SMSRKTMNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRAR 511

Query: 823  KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT- 881
             P S+Y  +++ GN      +   +  E  +  E   RT     K+T        +P   
Sbjct: 512  MPQSEYAFLVDSGNKKEIDVIDGFKEDEYRMNMEVTFRTS----KETY------IIPEER 561

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            +++++S+GA VS   ++ L+H YCS+LP D Y   +P F     +  GG    SC + LP
Sbjct: 562  IFRIDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPSF--HYLDDSGG---ISCHITLP 616

Query: 942  CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV---DQN 998
             NAP  ++ G    SM  +++  CL A ++L+ +GA +D LLP +   E + +V      
Sbjct: 617  SNAPINQILGTPQLSMEASKREACLKAIEELYNLGALSDCLLPKQDDAEPEVQVSGSSDE 676

Query: 999  DEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGS--------------KLFHLFM 1044
            DE + +     H    P          WI         S              K F LFM
Sbjct: 677  DESDAISRGKLHEMLVPSAFGQ----SWINEDNIVRLNSYYIKFCPYPEDRVYKEFGLFM 732

Query: 1045 YTVKCVNNGISK----------DPFLTQVSDFAVLFSSELDAELASLKNFHVRLMSIVLD 1094
             T  C+     K             +T    F V+  ++ + ++A  +NF    + I+LD
Sbjct: 733  MT--CLPMEAEKLELDLHLAHGRSVMTMFVPFGVVEFNKDEIKMA--ENFQEMFLKIILD 788

Query: 1095 --------VDV-EPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNP 1144
                    VD+     +    +  YL +PVV  +  + M E+DW +V++   +  + +P
Sbjct: 789  RLEFISEFVDLGMSAESHSGTSTFYLLLPVVLQEYGNAM-EVDWKIVKRCLCSPIFRHP 846



 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 219/615 (35%), Positives = 323/615 (52%), Gaps = 52/615 (8%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            L +A+   +  ++E  +V A H    ++V ++ YE    S  P  +        SSY DY
Sbjct: 861  LQLANGYRSVRNVENSLVYAPHKKNFYFVTNVNYEKNGYS--PHNDS-----GTSSYVDY 913

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
            + +K+ + L   KQPL+  + VS   NLL     H+ ++E    + LD+ Y ++LPPELC
Sbjct: 914  FIEKFSIHLKCPKQPLLHVKPVSNLHNLL-----HNRKREDAEPQELDE-YLIYLPPELC 967

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVP------ASKILEALTAA 1394
             +  +  S   G+    LPSIM R+ ++L+AI+LK  ++   P      A ++LEALT  
Sbjct: 968  ELKVIGFSKDIGSSISLLPSIMHRLGNLLVAIELKHMLSSSFPEAAEISAIRVLEALTTE 1027

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             CQE F  ER E+LGDA+LK+ V+R  FL +   HEG LT+ R   V+N  L++ A+ + 
Sbjct: 1028 KCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIKRN 1087

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ YI    F P+++ A G  P     + + + S+     SV +    T+          
Sbjct: 1088 LQVYICDQTFDPTQFYALG-RPCPRVCSNETEESIHFCLNSVMQQGKATETRC------- 1139

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                     S ++  L  KT+ADVVEAL+G + V+ G  AA   + WIGIQV+ +  +V 
Sbjct: 1140 ---------SKNHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVV 1190

Query: 1575 --CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              C +  +  P S    VD  +LE  L   F  +GLL++A  H S    G  CYQRLEF+
Sbjct: 1191 DICIASASYSPLS--SEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLGGGCYQRLEFL 1248

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GDAVLD+LIT +LF +Y  L PG+LTDLR+ +VNN+ FA +AV       L   SS L  
Sbjct: 1249 GDAVLDYLITSYLFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDNFLLCDSSGLSE 1308

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
             I+ +V  V   +   G         K PK LGD+VES  GAI LDSG + + VW++   
Sbjct: 1309 AIKKYVDYVRRPVSDNGIKE----GPKCPKALGDLVESCVGAILLDSGFNLNKVWKIMTS 1364

Query: 1753 LLDPMVT-PETLPMHPVRELQERCQQQAEGLEY--KASRSGNLATVEVYIDG---VQVGV 1806
             LDP++    +L + PVR+L+E CQ     LE+    S+     +VE  + G    +   
Sbjct: 1365 FLDPIMKFSSSLQLSPVRDLRELCQSHNLELEFLPVPSKLTKRFSVEAKVSGNGVCETAS 1424

Query: 1807 AQNPQKKMAQKLAAR 1821
            A    KK A ++A++
Sbjct: 1425 ATGQNKKEACRIASQ 1439



 Score = 45.8 bits (107), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 1848 NGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTD-KGWTDECVGE 1906
            +GT T  R  L ++C    W  P + C ++ GP H K+FT  V +   + +    E VGE
Sbjct: 1547 SGTGT-ARSRLYELCAAYCWKPPSFECCKKEGPDHLKQFTCKVTLEIEEAQNLILEFVGE 1605

Query: 1907 PMPSVKKAKDSAA 1919
            P+   K A +SAA
Sbjct: 1606 PLSKKKDAAESAA 1618


>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
          Length = 1340

 Score =  331 bits (848), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 224/606 (36%), Positives = 330/606 (54%), Gaps = 62/606 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+ + + +  I  E+   S    K G L      +Y +YY+ ++G+EL F 
Sbjct: 779  LKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGL-----LTYKEYYRLRHGIELQFD 833

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             + L++GR +   +N L  R    +E+E      L  T  V LPPELC  F+ P+  S++
Sbjct: 834  GEKLLKGRRMFVVQNYLQ-RCRQQKEKE------LSNTT-VELPPELCVIFMSPISISII 885

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKD-KINY----PVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R+ES+LLA+ LK+  +NY     +P  K+LEA+T   CQE F  E  E 
Sbjct: 886  YSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLET 945

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+  S+ LF  +   HEG L+  +++++SN  L +    + L  +I+ + F P 
Sbjct: 946  LGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPK 1005

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
            +W   G             S +F +E   +  K+                       S  
Sbjct: 1006 KWIIAG---------DQSRSHVFGEELLSSTRKIYV---------------------SER 1035

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
            R L SK +ADVVEALIG +   GG+ AA   M+W+GI V+     V  P +    P  + 
Sbjct: 1036 RKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDF----VKVPYKRD-FPVILK 1090

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
            R V+   LE  L   F+D  LLVEA+TH S     +  CYQRLEF+GDAVLD+L+T HL+
Sbjct: 1091 RHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLY 1150

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y  + PG LTDLR+A+VNN+ +A+ AVK KLH H+ H S  L R I   V    ++L 
Sbjct: 1151 HKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGN-FDKL- 1208

Query: 1707 KPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P  ++FG   +   PKVLGD++ES+AGAI +DS  +  VV+Q  +PLL+P++TPET+ +
Sbjct: 1209 -PVESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKL 1267

Query: 1766 HPVRELQERCQQQAEGLE-YKASRSGNLA-TVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            HP REL E CQ++   ++    S++G  + T+EV  +G +        K+ A KLA++  
Sbjct: 1268 HPARELGELCQKEHYDIKRVVVSQNGKASVTIEVEANGAKHKHTSTSDKRTATKLASKEV 1327

Query: 1824 LAVLKE 1829
            L  LKE
Sbjct: 1328 LKSLKE 1333



 Score =  320 bits (820), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 227/680 (33%), Positives = 350/680 (51%), Gaps = 86/680 (12%)

Query: 345  LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
            L R+    +AVFLVPKV LV QQAE ++  T   VG Y G+MG DFWDA  W++E D  +
Sbjct: 9    LLRKPSPFIAVFLVPKVVLVPQQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQDKHE 68

Query: 405  VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRP 461
            VLVMT  ILLN LRHS  K++ I +LI DECHHA  K PY+ +M EFYH    ++    P
Sbjct: 69   VLVMTPAILLNGLRHSFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHEQVRSNNSNLP 128

Query: 462  SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY- 520
             +FGMTASP+  KG +S   C   +  LE+ ++S + T      L + VP  +  +  Y 
Sbjct: 129  RIFGMTASPIKTKGTTSTWSCGKNMIELENLMNSKIYTSVSEAVLAEFVPFSTPKLTHYK 188

Query: 521  --DKAASLW-SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
              D  ++L+ ++  QL+ ++   E + +S         M +    A++++ +++      
Sbjct: 189  DKDIPSALFENVAHQLEILKNKYEHSLES------LNLMESTKESARKKISKLFS----- 237

Query: 578  ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKV 637
                         A  + L +LG W A K A+ F      D     QLD+  +E      
Sbjct: 238  -------------AFLFCLNDLGLWLALKAAE-FSFCDDMDICCWGQLDLSGEE------ 277

Query: 638  VSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAV 697
                    +    +K   KV+ +          E+  G+ L+               A  
Sbjct: 278  --------IIKNFNKDAYKVIST----YLPSDRELSVGDDLE---------------ADA 310

Query: 698  ADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
              G +T KV  L+  LL+Y+H ++ R I+FVERV+ A+VL K+ ++L        A  I 
Sbjct: 311  ESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAGYIA 370

Query: 758  HNNSQ-EMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
             N SQ + ++ ++Q  + + FR G V ++V+TS+ EEGLD++ CN+VIRFD + TV ++I
Sbjct: 371  GNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVCSFI 430

Query: 816  QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
            QSRGRAR   SDY+LM++ G+    + LR   +S + +R+E++    L      S L   
Sbjct: 431  QSRGRARMQNSDYLLMVKSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSLDDE 490

Query: 876  DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
            +      Y VEST A+V+L+S++GL++FYCS+LPSD Y   +P      ++  G     +
Sbjct: 491  E-----FYWVESTRAIVTLSSSIGLLYFYCSRLPSDGY--FKPTPRCSINQDMG-----T 538

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
            C +  P + P + +   V  +++  +Q  CL ACK+LH+ GA TD L+P     E     
Sbjct: 539  CTIYHPKSCPIQTVS--VRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQ 596

Query: 996  DQNDEGEPLPGTARHREFYP 1015
            D+N     +P       +YP
Sbjct: 597  DEN-----MPYDDEQATYYP 611


>gi|302826423|ref|XP_002994689.1| hypothetical protein SELMODRAFT_432592 [Selaginella moellendorffii]
 gi|300137140|gb|EFJ04244.1| hypothetical protein SELMODRAFT_432592 [Selaginella moellendorffii]
          Length = 243

 Score =  330 bits (847), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 164/236 (69%), Positives = 198/236 (83%), Gaps = 2/236 (0%)

Query: 1694 IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            I+DFVK++  EL KPG NSFG+GD KAPKVLGDI+ESIAGAIFLD+G     VW+VF+ L
Sbjct: 1    IKDFVKDIQSELDKPGINSFGIGDFKAPKVLGDILESIAGAIFLDTGLAADEVWKVFERL 60

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            L+PMVTP+TLP+HPVRELQERCQQQAEGLEY+ASR G++ATVEV++DGVQ+G AQN QKK
Sbjct: 61   LEPMVTPDTLPVHPVRELQERCQQQAEGLEYRASREGSIATVEVFVDGVQIGCAQNTQKK 120

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            MAQKLAARNALA LKE+++ E  E+ ++  K   +    FTRQTLNDICL+R WPMP YR
Sbjct: 121  MAQKLAARNALAALKERDSLE--EESNKVTKMENDKANAFTRQTLNDICLQRQWPMPQYR 178

Query: 1874 CVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKW 1929
             + E GPAHAKRFTY VRVNT ++GWTDEC G+ MPS+KKAKDSAA++LLE+L +W
Sbjct: 179  LLSESGPAHAKRFTYTVRVNTRERGWTDECEGQAMPSMKKAKDSAALVLLEVLKQW 234


>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score =  328 bits (841), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 330/606 (54%), Gaps = 62/606 (10%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            L+  IV   H+ + + +  I  E+   S    K G L      +Y +YY  ++G+EL F 
Sbjct: 735  LKNSIVYTPHTSQFYCITGILGELNGNSFLSLKNGGL-----LTYKEYYXLRHGIELQFD 789

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             + L++GR +   +N L  R    +E+E      L  T  V LPPELC  F+ P+  S++
Sbjct: 790  GEKLLKGRRMFVVQNYLQ-RCRQQKEKE------LSNTT-VELPPELCVIFMSPISISII 841

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKD-KINY----PVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM R+ES+LLA+ LK+  +NY     +P  K+LEA+T   CQE F  E  E 
Sbjct: 842  YSFSLIPSIMHRIESLLLAVNLKNIHLNYCKQNDIPTFKVLEAITTKHCQEGFHLESLET 901

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD++LK+  S+ LF  +   HEG L+  +++++SN  L +    + L  +I+ + F P 
Sbjct: 902  LGDSFLKYAASQQLFKTFQNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPK 961

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
            +W   G             S +F +E   +  K+                       S  
Sbjct: 962  KWIIAG---------DQSRSHVFGEELLSSTRKIYV---------------------SER 991

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
            R L SK +ADVVEALIG +   GG+ AA   M+W+GI V+     V  P +    P  + 
Sbjct: 992  RKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDF----VKVPYKRD-FPVILK 1046

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
            R V+   LE  L   F+D  LLVE++TH S     +  CYQRLEF+GDAVLD+L+T HL+
Sbjct: 1047 RHVNVSYLESILNYSFRDPSLLVESLTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLY 1106

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
              Y  + PG LTDLR+A+VNN+ +A+ AVK KLH H+ H S  L R I   V +  ++L 
Sbjct: 1107 HKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGB-FDKL- 1164

Query: 1707 KPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
             P  ++FG   +   PKVLGD++ES+AGAI +DS  +  VV+Q  +PLL+P++TPET+ +
Sbjct: 1165 -PXESTFGWESESSFPKVLGDVIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPETVKL 1223

Query: 1766 HPVRELQERCQQQAEGLE-YKASRSGNLA-TVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            HP REL E CQ++   ++    S++G  + T+EV  +G +        K+ A KLA++  
Sbjct: 1224 HPARELXELCQKEHYXIKRVVVSQNGKASVTIEVEANGAKHKHTSTSDKRTAXKLASKEV 1283

Query: 1824 LAVLKE 1829
            L  LKE
Sbjct: 1284 LKSLKE 1289



 Score =  180 bits (457), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 186/323 (57%), Gaps = 21/323 (6%)

Query: 695  AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
            A    G +T KV  L+  LL+Y+H ++ R I+FVERV+ A+VL K+ ++L        A 
Sbjct: 264  ADAESGFLTTKVICLVGSLLQYRHLKNLRCIVFVERVITAIVLQKLLSKLLPKLSGWEAG 323

Query: 755  LIGHNNSQ-EMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
             I  N SQ + ++ ++Q  + + FR G V ++V+TS+ EEGLD++ CN+VIRFD + TV 
Sbjct: 324  YIAGNASQLQSQSRRVQNALVEEFRKGMVNVIVSTSILEEGLDVQSCNLVIRFDPSATVC 383

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL 872
            ++IQSRGRAR   SDY+LM+  G+    + LR   +S + +R+E++    L      S L
Sbjct: 384  SFIQSRGRARMQNSDYLLMVRSGDDKTLSRLRTYLDSGKVMREESLRNASLPCAPLKSSL 443

Query: 873  ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
               +      Y VEST A+V+L+S++GL++FYCS+LPSD Y   +P      ++  G   
Sbjct: 444  DDEE-----FYWVESTRAIVTLSSSIGLLYFYCSRLPSDGY--FKPTPRCSINQDMG--- 493

Query: 933  EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
              +C + LP + P + +   V  +++  +Q  CL ACK+LH+ GA TD L+P      ++
Sbjct: 494  --TCTIYLPKSCPIQTVS--VRGNIKTLKQIACLEACKELHKAGALTDNLVPQI---VEE 546

Query: 993  EKVDQNDEGEPLPGTARHREFYP 1015
            E +   DE   +P       +YP
Sbjct: 547  EAIVAQDEN--MPYDDEQATYYP 567



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 103/187 (55%), Gaps = 42/187 (22%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P   AR YQ++ LE+A K+NTI FLETG+GKTLIA++L+R   + L R+    +AVFLVP
Sbjct: 20  PLPFARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAH-LLRKPSPFIAVFLVP 78

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           KV LV                                       QVLVMT  ILLN LRH
Sbjct: 79  KVVLV--------------------------------------PQVLVMTPAILLNGLRH 100

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTASPVNLKGV 476
           S  K++ I +LI DECHHA  K PY+ +M EFYH    ++    P +FGMTASP+  KGV
Sbjct: 101 SFFKLDMIKVLIFDECHHARGKDPYACIMKEFYHXQVRSNNSNLPRIFGMTASPIKTKGV 160

Query: 477 SSQVDCA 483
           +  +  A
Sbjct: 161 NDLMHSA 167


>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 1636

 Score =  326 bits (835), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 243/740 (32%), Positives = 365/740 (49%), Gaps = 88/740 (11%)

Query: 297  EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
            +K P + AR YQL++ ++A ++N I +L TG GKT IAVLL+  +   L R+ +K + VF
Sbjct: 43   KKDPRKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMYGM-GHLIRKPQKNICVF 101

Query: 357  LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            L P V LV+QQA+VI + T + VG YCG   +     Q W++E    +VLVMT QILL+ 
Sbjct: 102  LAPTVALVHQQAKVIADSTNFKVGTYCGS-SKRLKRHQDWEQEIGQYEVLVMTPQILLHN 160

Query: 417  LRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            L H  I ME I LLI DECHHA  K  H Y+++M  FY + S  K P +FGMTASPV  K
Sbjct: 161  LSHCFITMEMIALLIFDECHHAQVKSNHAYAVIMKVFYKSNS-SKVPRIFGMTASPVVGK 219

Query: 475  GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA----SLWSLH 530
            G SS+ + A  I +LE  LD+ V +++D KEL+  V  P   +  Y   A    SL+   
Sbjct: 220  GASSEANLAKSINSLEHILDAKVYSVED-KELQSFVTTPVINIYHYVSTASGETSLYLKI 278

Query: 531  EQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
            E++K+  +A +  + +   +R            AK+ L +++            N+I   
Sbjct: 279  EEIKRQCIANLGRSIEDHQKR----------MNAKKLLNRMHD-----------NVI--- 314

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
                + L  LG W A + +   L+  +++                         ELVE  
Sbjct: 315  ----FGLQNLGIWGALQASHILLSGDRSERH-----------------------ELVEAE 347

Query: 650  VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
             +  D  + D             +  EL  S  + G    D+     + +   + K+  L
Sbjct: 348  GNSSDDSLCDKYLA---------QAAELFTSQCMIGDRVTDLSSVEILKEPFFSAKLLRL 398

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQ 768
            I IL  ++  ++ + IIFV R+V A  L  +  +L  L   +S  L+G H   + M    
Sbjct: 399  IGILSNFRLQKNMKCIIFVNRIVTARSLSYILQKLKLLRQWRSDFLVGVHAGLKSMSRKT 458

Query: 769  MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
            M   + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y
Sbjct: 459  MNIIVDKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEY 518

Query: 829  ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT-VYQVES 887
              +++ GN      +      E  +  E   RT     K+T        +P   +++V+S
Sbjct: 519  AFLVDSGNKKELDIIDGFEKDEYRMNMEITFRTS----KETY------IIPEERIFRVDS 568

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            +GA VS   ++ L+H YCS+LP D Y   +P F     +  GG    SC + LP NAP  
Sbjct: 569  SGASVSSGYSISLLHQYCSKLPHDEYFDPKPCFYY--LDDSGG---ISCHITLPSNAPIN 623

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGT 1007
            ++ G    SM  +++  CL A ++L+ +G  +D LLP +   E + +V  + + +     
Sbjct: 624  QILGTPQLSMEASKRDACLKAIEELYNLGTLSDCLLPKQDDAEPEAQVSGSSDEDECEDA 683

Query: 1008 ARHREFYPEGVADILQGEWI 1027
                E +   V       WI
Sbjct: 684  ISRGELHEMLVPSAFGQSWI 703



 Score =  314 bits (805), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 218/614 (35%), Positives = 324/614 (52%), Gaps = 52/614 (8%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            L +A+   +  D+E  +V A H    ++V ++ Y+    S  P  +        SSY DY
Sbjct: 863  LQLANGYRSVRDVENSLVYAPHKKNFYFVTNVNYQKNGYS--PHNDS-----GTSSYVDY 915

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
            + +K+ + L   +QPL+  + VS   NLL  R +H + +  E +E     Y ++LPPELC
Sbjct: 916  FIEKFSIHLKCPEQPLLHVKPVSNLHNLLHNR-KHEDAEPQELDE-----YLIYLPPELC 969

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVP------ASKILEALTAA 1394
             +  +  S   G+    LPSIM R+ ++L+AI+LK +++   P      A ++LEALT  
Sbjct: 970  ELKIIGFSKDIGSSISLLPSIMHRLGNLLVAIELKHRLSSSFPEAAEISALRVLEALTTE 1029

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             CQE F  ER E+LGDA+LK+ V+R  FL +   HEG LT+ R   V+N  L++ A+ + 
Sbjct: 1030 KCQERFSLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIKRN 1089

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            LQ YI    F P+++ A G  P     + +   S+     SV E    T+   N+     
Sbjct: 1090 LQVYICDQTFDPTQFYALG-RPCPRLCSNETKESIHFCLNSVKEQGKVTETQCNK----- 1143

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                       ++  L  KT+ADVVEAL+G + V+ G  AA   + WIGIQV+ +  +V 
Sbjct: 1144 -----------NHHWLHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVV 1192

Query: 1575 --CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              C +  + +P S    VD  +LE  L   F  +GLL++A  H S    G  CYQRLEF+
Sbjct: 1193 DICIASASYLPLS--SEVDIPSLEGKLGHHFFHKGLLLQAFVHPSYNKLGGGCYQRLEFL 1250

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GDAVLD+LIT ++F +Y  L PG+LTDLR+ +VNN+ FA +AV       L   SS L  
Sbjct: 1251 GDAVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDSSGLSE 1310

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
             I+ +V  +   +     NS   G  K PK LGD+VES  GAI LDSG + + VW++   
Sbjct: 1311 AIKKYVDYIRRPVSD---NSIKEGP-KCPKALGDLVESCVGAILLDSGFNLNKVWKIMTS 1366

Query: 1753 LLDPMVT-PETLPMHPVRELQERCQQQAEGLEY--KASRSGNLATVEVYIDG---VQVGV 1806
             LD ++    +L + PVR+L+E CQ     LE+    S+     +VE  + G    +   
Sbjct: 1367 FLDSIMKFSSSLQLSPVRDLRELCQSHNMELEFLPVPSKLTKRFSVEAKVSGNGVCETAS 1426

Query: 1807 AQNPQKKMAQKLAA 1820
            A    KK A ++A+
Sbjct: 1427 ATGQNKKEACRIAS 1440



 Score = 45.4 bits (106), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 1848 NGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTD-KGWTDECVGE 1906
            +GT T  R  L ++C    W  P + C +  GP H K+FT  V +   + +    E VGE
Sbjct: 1547 SGTGT-ARSRLYELCASYCWKPPSFECCKAEGPDHLKQFTCKVTLEIEEAQNLILEFVGE 1605

Query: 1907 PMPSVKKAKDSAA 1919
            P+   K A +SAA
Sbjct: 1606 PLSKKKDAAESAA 1618


>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
 gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
          Length = 1633

 Score =  325 bits (834), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 221/622 (35%), Positives = 328/622 (52%), Gaps = 50/622 (8%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            L +A+ C +  D+E  +V   H    +++ +I     A S  P K         SSY ++
Sbjct: 859  LQLANGCRSIRDIENSLVYIPHKKHFYFITNIDRGKNARS--PHKCS-----STSSYMEF 911

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
              Q++G++L + +QPL++ + +    NLL     H+  +E    + LD+ Y +  PPELC
Sbjct: 912  LIQRFGIQLKYPEQPLLQAKPLFSLHNLL-----HNRRKEDSVTQELDE-YLIDFPPELC 965

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYP------VPASKILEALTAA 1394
             +  +  S   G+    LPSIM R+E++L+AI+LK  ++        V A +ILEALT  
Sbjct: 966  ELKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKSLLSASFSEGAEVTAYRILEALTTE 1025

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             CQE    ER E+LGDA+LK+ V R LFL +    EG+LTR R   V+N  L + A  + 
Sbjct: 1026 RCQERLSLERLEILGDAFLKFAVGRHLFLLHDTLDEGELTRKRSNAVNNSNLLKLASRRN 1085

Query: 1455 LQSYIQADRFAPSRWAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            LQ YI+   F P ++ A G   PV    TK+ + S+    +S A+ +  T +        
Sbjct: 1086 LQVYIRDQPFDPRQFFALGHPCPVIC--TKESEGSIHSSNRSNAKGQENTIEVRC----- 1138

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                      S  +  L  KT+ADVVEAL+G + V+ G  AA   +KW+GI+V  +  +V
Sbjct: 1139 ----------SRGHHWLYKKTIADVVEALVGAFIVDSGFRAATAFLKWLGIRVNIEASDV 1188

Query: 1574 G--CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
               C +    +P  +  S+D  +LED+L  +F +RGL+++A  H S    G  CYQRLEF
Sbjct: 1189 TKVCLASRTFMP--LAPSIDVSSLEDSLDHQFVNRGLVLQAFVHPSYNKHGGGCYQRLEF 1246

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLD+LIT +LF  Y  L PG LTDLR+A VNN  FA VAV    +  L   S  L 
Sbjct: 1247 LGDAVLDYLITSYLFSVYPKLKPGLLTDLRSALVNNRAFAIVAVDRSFNEFLICDSGNLS 1306

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
              I  +V  V     +P      L   K PKVLGD+VES  GAIFLD+G D + +W++  
Sbjct: 1307 EAIETYVNFV----KRPAVEKDSLEGPKCPKVLGDLVESCIGAIFLDTGFDLNCIWKLML 1362

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGV---AQ 1808
              LDP++    + ++P REL E C+     L++   +      VE  + G  + +   A 
Sbjct: 1363 SFLDPILNSSNVLLNPFRELHEFCESHKWKLQFPTLKRDMNFLVEAKVTGKDICLDASAN 1422

Query: 1809 NPQKKMAQKLAARNALAVLKEK 1830
            N  KK A ++A+   +  LK++
Sbjct: 1423 NSNKKEAIRIASEQIIVKLKDQ 1444



 Score =  324 bits (830), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 239/751 (31%), Positives = 370/751 (49%), Gaps = 98/751 (13%)

Query: 272  NRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKT 331
            NR   + +G   ECN       +  EK P + AR YQL++ ++A ++N I +L TG GKT
Sbjct: 20   NRIAGDDDG--DECNSM----PQQPEKDPRKIARKYQLELCKKALEENIIVYLGTGCGKT 73

Query: 332  LIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW 391
             IAVLLI  +   L R+  K + VFL P V LV QQ  VI +   + VG YCG       
Sbjct: 74   HIAVLLIYEL-GHLIRKPLKNVCVFLAPTVALV-QQVRVIEQSIDFKVGVYCGN-SNHLK 130

Query: 392  DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAV--KKHPYSLVMS 449
              + W++E +  +VLVMT QILL+ L HS IKME I+LLI DECHHA     HPY+ +M 
Sbjct: 131  SHRDWEKEIEQNEVLVMTPQILLHTLGHSFIKMELISLLIFDECHHAQVQSSHPYAEIMK 190

Query: 450  EFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKH 509
             FY  T   K P +FGMTASPV  KG S+Q +    I +LE+ LD+ V +++D +ELE  
Sbjct: 191  VFY-KTGDGKFPRIFGMTASPVVGKGASNQANLPKSINSLENLLDAKVYSVEDNEELELF 249

Query: 510  VPMPSEVVVEY-----DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAK 564
            V  P   +  Y     +K++S  +   +L++++           R+   +     D+   
Sbjct: 250  VASPVVRIYLYAPVANEKSSSYMTYFSKLEEIK-----------RKCLLELHKKADS--- 295

Query: 565  EELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQ 624
               + ++G+      +     I+    + + L  LG W A +  +  L+    +  A  +
Sbjct: 296  --CQSLHGLQ-----NAKKVFIRMHDNVVFCLENLGFWGALQACKILLSDDHFEWNALIE 348

Query: 625  ----LDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDS 680
                +D    + YL++  ++        +V  KD    D            +   E+L  
Sbjct: 349  AEGNIDASVCDKYLAQAANMF------ASVCTKDCIAFD------------LSSVEVLTE 390

Query: 681  HVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKV 740
               S                    K+  LI IL  ++   + + I+FV R+V A  L  V
Sbjct: 391  PFFSR-------------------KLLRLIGILSTFRLQPNMKGIVFVNRIVTARSLSYV 431

Query: 741  FAELPSLSFVKSASLIG-HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQC 799
               L  L   K   L+G H+  + M    M   + KF+ G++ LL+AT V EEGLDI+ C
Sbjct: 432  LQNLKFLISWKCDFLVGVHSGLKSMSRKTMNSILEKFKTGKLNLLIATKVGEEGLDIQTC 491

Query: 800  NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
             +V+RFDL +TV ++IQSRGRAR P S+Y  +++ GN      +   R  E+ +  E   
Sbjct: 492  CLVVRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNQKELDLIERFRRDEDRMNMEISS 551

Query: 860  RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPE 919
            RT           +S++     VY+V+ +GA +S   ++ L+H YCS+LP D Y   +P+
Sbjct: 552  RT------SNETFVSIEE---KVYKVDESGACISSAYSISLLHHYCSKLPHDEYFDPKPQ 602

Query: 920  FIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFT 979
            F     +  GG     C + LP NAP  ++ G   SS   A++  CL A ++LH++G+ +
Sbjct: 603  FFF--FDDLGGTI---CHIILPANAPVHQIVGTPQSSREAAKKDACLKAIEQLHKLGSLS 657

Query: 980  DMLLPDKGSGEQQEKV----DQNDEGEPLPG 1006
            + LLP +    ++  +     +N+EGE + G
Sbjct: 658  NFLLPHEKDVNEESMLASSEPENNEGEGVRG 688



 Score = 45.8 bits (107), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 1852 TFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNT-TDKGWTDECVGEP 1907
            T  +  L+DIC    W  PL+ C  E GP+H K F+Y V V          EC G P
Sbjct: 1549 TSAKSRLHDICAANCWKPPLFECCYEEGPSHLKSFSYKVIVEIEAAPDMILECFGAP 1605


>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1693

 Score =  324 bits (831), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 242/739 (32%), Positives = 372/739 (50%), Gaps = 75/739 (10%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            S   EK P + AR YQ+++ ++A ++N I +L TG GKT IAV++I  +   L    KK 
Sbjct: 108  SSKMEKDPRKIARRYQVELCKKAMEENIIVYLGTGCGKTHIAVMVIYEL-GHLVLSPKKS 166

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ-RWQREFDTKQVLVMTAQ 411
            + +FL P V LV QQA+VI +   + V  +CG  G+    +   W+RE    +VLVMT Q
Sbjct: 167  VCIFLAPTVALVEQQAKVIADSVNFKVAVHCG--GKRIVKSHSEWEREISENEVLVMTPQ 224

Query: 412  ILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
            ILL+ L+H  I+ME I+LLI DECHHA ++  HPY+ +M  FY + S + RP +FGMTAS
Sbjct: 225  ILLHNLQHCFIRMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQ-RPRIFGMTAS 283

Query: 470  PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
            PV  KG     + +  I +LE+ LD+ V +++   +L+  V  P   V  Y  A S  S 
Sbjct: 284  PVVGKGSFQSENLSKSINSLENLLDAKVYSVESNVQLDGFVSSPIVKVYYYQSAISDAS- 342

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
             +   + E  +E+  Q      K Q     D    + L  +  + ++T      NLI   
Sbjct: 343  -QSTIRYENMLEDIKQRCLTSIKLQI----DTHQTQTLLNMKRLLKKTHD----NLI--- 390

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
                Y+L  LG W A + A+  L +   +E        K  ++YLS     L  E++   
Sbjct: 391  ----YSLVNLGLWGAIQAAKIQLNSDVQEEPVGENPKSKICDTYLS-----LAAEVLSSG 441

Query: 650  VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
            V+K ++                    ELL                AA+ +   + K+  L
Sbjct: 442  VAKDESA------------------SELLSL--------------AALKEPLFSRKLVQL 469

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQM 769
            I+IL  ++     + IIFV R+V A  L  +   L  L   KS  L+G ++  +  + + 
Sbjct: 470  IEILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKSMSRRG 529

Query: 770  QETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
             ETI K F+   + LLVAT V EEGLDI+ C +VIR+DL +TV ++IQSRGRAR P S+Y
Sbjct: 530  METILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMPQSEY 589

Query: 829  ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
              +++ GN      + N R +E+ + +E   RT     ++T  ++  +     +Y+V  T
Sbjct: 590  AFLVDSGNEKEMDLIENFRVNEDRMNQEITSRTS----EETCPILDEE-----LYKVHET 640

Query: 889  GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
            GA +S  S++ L++ YCS+LP D +   +PEF  +   + GG     C++ LP NAP  +
Sbjct: 641  GACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVNEFGGTI---CRITLPANAPISE 697

Query: 949  LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTA 1008
            +   +  S   A++  CL A  +LH +G   D LLPD     + E  D   + + + G  
Sbjct: 698  IVSSLLPSTEAAKKDACLKAVYELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDNIKGEG 757

Query: 1009 RHR-EFYPEGVADILQGEW 1026
              R E Y   V  + + +W
Sbjct: 758  CSRGELYEMVVPVLFKQKW 776



 Score =  295 bits (755), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 214/632 (33%), Positives = 319/632 (50%), Gaps = 60/632 (9%)

Query: 1219 PTGK-LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYS 1277
            PTG  L +A+ C N  D++  +V   H+ + ++V  I Y     S  P KE         
Sbjct: 932  PTGSYLNLANGCWNIDDVKNSLVFMTHNKQFYFVADICYGRNGFS--PVKES-----STK 984

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            S+ +   + YGVEL +  QPL+R + + + +NLL  R + + E +   E      Y++ +
Sbjct: 985  SHMENIYKLYGVELKYPGQPLLRVKPLCHVRNLLHNRMQKNLEPQELDE------YFIEI 1038

Query: 1338 PPEL--CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP------ASKILE 1389
            PPEL    I  L   +      LPSIM RVE++L+AI+LK  ++  +P        ++LE
Sbjct: 1039 PPELSQLKIKGLSKEIGSSLSLLPSIMHRVENLLVAIELKHVMSASIPEIAEVSGHRVLE 1098

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALT   C E    ER E+LGDA+LK+ VSR LFL + +  EG+LTR R + V+N  L + 
Sbjct: 1099 ALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDRLDEGELTRRRSKAVNNSNLCRL 1158

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ + LQ YI+     P+++ A                  F     V  D++ ++    E
Sbjct: 1159 AIKRNLQVYIRDQALDPTQFFA------------------FGHPCRVTCDEVTSE----E 1196

Query: 1510 YEDDDMEDGELEGDS-----SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
                +   G LE +S       +  L  KT+ADVVEAL+G + V+ G   A   + WIG+
Sbjct: 1197 VHSLNRVPGLLESNSEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLSWIGV 1256

Query: 1565 QVESDPEEV--GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
             V+ +  +V   C +    +P +   +++  ALE+ L   F  +GLLV+A  H S    G
Sbjct: 1257 NVDFESLQVQDACIASRRYMPLTTRNNLE--ALENQLDYNFLHKGLLVQAFIHPSYNRHG 1314

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
              CYQRLEF+GDAVLD+L+T + F  +  L PG+LTDLR+ +VNN+  A VAV   L   
Sbjct: 1315 GGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNKALANVAVSFSLKRF 1374

Query: 1683 LRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
            L   S  L   I D+        L  G +       + PKVLGD+VES  GA+FLD G +
Sbjct: 1375 LFCESVYLHEAIEDYTNFRAASPLASGPSE----GPRCPKVLGDLVESCLGALFLDCGFN 1430

Query: 1743 TSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYID-- 1800
             + VW +    LDP+     L + P++EL E CQ      E  A++     +VE+ +   
Sbjct: 1431 LNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGGFSVELKVTKK 1490

Query: 1801 GVQVGV-AQNPQKKMAQKLAARNALAVLKEKE 1831
            G  + V A    K+ + K AA+  +  LK  E
Sbjct: 1491 GCCLTVSATGRNKRESTKKAAQLMITSLKAHE 1522



 Score = 41.6 bits (96), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDK-GWTDECVGE 1906
            +  L++ C+   W  P + C  E GP H K F Y V +   D    T EC GE
Sbjct: 1615 KSLLHETCVANCWKPPHFECCEEEGPGHLKSFFYKVILEVEDAPNMTLECYGE 1667


>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
            sativus]
          Length = 1228

 Score =  323 bits (827), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 213/622 (34%), Positives = 329/622 (52%), Gaps = 52/622 (8%)

Query: 1223 LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY 1282
            LM+ D    + D+E  +V   + G+  +V +I       S + +  G+      SS+ ++
Sbjct: 442  LMLYDGHRRSSDIENSLVYVPYKGEFXFVTNIERGKNGHSQY-KNSGF------SSHFEH 494

Query: 1283 YKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
             K K+G+ L + +QPL+R + +    N L     H+ ++E      L++ Y++ LPPE+C
Sbjct: 495  LKTKFGIHLNYPEQPLLRAKPLFLLHNWL-----HNRKREDSEARHLEE-YFIELPPEVC 548

Query: 1343 FIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYPVPA------SKILEALTAA 1394
             +  +  S   G+    LPSIM R+E++L+AI+LK ++    PA      ++ILEALT  
Sbjct: 549  QLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAAFPAGAEVTANRILEALTTE 608

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
             CQE    ER E+LGD++LK+ V+R+LFL + +  EG+LTR R  +V N  L + A  K 
Sbjct: 609  KCQERISLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKN 668

Query: 1455 LQSYIQADRFAPSRW---AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
            LQ YI+   F PS++     P      +E +KD  S           D    +   NE +
Sbjct: 669  LQVYIRDQPFEPSQFYLLGRPCPRICNEETSKDIHS----------HDDATNNAKANETK 718

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE 1571
                        S  +  L  KT++DVVEAL+G + V+ G  AA   +KWIGIQVE +  
Sbjct: 719  -----------CSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEAS 767

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
             V      +     +  S+D  AL+++L  +F  +GLL++A+ H S    G  CYQRLEF
Sbjct: 768  LVTDALMASNAYVLLADSIDISALQNSLGHRFLHKGLLLQALVHPSYHKHGGGCYQRLEF 827

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLD+LIT +L+ +Y  L PG+LTDLR+  V NE FA VAV    +  L   S++L 
Sbjct: 828  LGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSTSLL 887

Query: 1692 RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
              I+ +V  +      P F    L   + PK LGD+VES  GA+ +D+G D + VW++  
Sbjct: 888  SDIKSYVHFI----KAPPFERDSLEQPRCPKALGDLVESSVGAVLVDTGFDMNCVWKIML 943

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ---VGVAQ 1808
              +DP+++     + P+R++ E CQ     L++ +S+     +V+  + G        A 
Sbjct: 944  SFIDPIMSFSGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYYSVKAEVKGGNFHATASAA 1003

Query: 1809 NPQKKMAQKLAARNALAVLKEK 1830
            N +KK A K+AA   L  LK K
Sbjct: 1004 NRRKKDAAKIAANLILTKLKAK 1025



 Score =  154 bits (388), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 31/302 (10%)

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
            G + LL+AT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S+Y  +++ GN  
Sbjct: 49   GALNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEK 108

Query: 839  HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
                +   R  E  + +E   R+            + D+   ++Y+V STGA ++   ++
Sbjct: 109  ELGLINEFRKDENRMNREIYSRSSNE---------TFDSHEESIYRVASTGASITSGRSI 159

Query: 899  GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR 958
             L+H YCS+LP D Y   +P+F    ++  GG     C + LP NAP  ++     SS  
Sbjct: 160  SLLHEYCSKLPHDDYFDPKPQF--SYYDDLGGTV---CHVNLPSNAPIPQIVSRSQSSKD 214

Query: 959  LAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---EQQEKVDQNDEGEPLPGTARHREFYP 1015
             A++  CL A ++LH++GA +D LLP +G G   EQ+  ++ +D       T+R RE + 
Sbjct: 215  AAKKDACLKAVEELHKLGALSDYLLPMRGRGSANEQESGLNSSDSDSSEDETSR-RELHE 273

Query: 1016 EGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELD 1075
                  L+  W        TGS    L+ Y +KC     + DP      +F +   + L 
Sbjct: 274  MIFPAALKESW--------TGSGYLVLYCYHIKC-----TPDPRDRNYKEFGLFVKAPLP 320

Query: 1076 AE 1077
             E
Sbjct: 321  QE 322



 Score = 41.2 bits (95), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 23/40 (57%)

Query: 1851 QTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAV 1890
            +T  R  L ++C   +W  P + C+ E GP+H K FTY V
Sbjct: 1136 KTTARSRLYEVCAANHWNRPSFDCMNEEGPSHLKMFTYKV 1175


>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
 gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
          Length = 1588

 Score =  322 bits (825), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 235/730 (32%), Positives = 359/730 (49%), Gaps = 86/730 (11%)

Query: 290  GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
            G   +  EK P + AR YQL++ ++A ++N I +L TG GKT IAVLLI  +   L RQ 
Sbjct: 35   GSGLQKTEKDPRKMARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYEM-GHLIRQP 93

Query: 350  KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMT 409
            +K   VFL P V LV+QQA+VI + T + VG YCG+  +       W++E +  +VLVMT
Sbjct: 94   QKSACVFLAPTVALVHQQAKVIEDSTDFKVGIYCGKSNR-LKTHSSWEKEIEQNEVLVMT 152

Query: 410  AQILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGMT 467
             QILL  L HS IKM+ I LLI DECHHA  K  HPY+ +M  FY      K P +FGMT
Sbjct: 153  PQILLYNLSHSFIKMDLIALLIFDECHHAQVKSGHPYAQIMKVFYKNNDG-KLPRIFGMT 211

Query: 468  ASPVNLKGVSSQVDCAIKIC--------------NLESKLDSVVCTIKDRKELEKHVPMP 513
            ASPV  K    +   +++I               +LE+ LD+ V +++D++ELE  V  P
Sbjct: 212  ASPVVGKEKYRERVTSLEILLHHLIRENLPRSINSLENLLDAKVYSVEDKEELECFVASP 271

Query: 514  SEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV 573
               V  Y   A+                    SSS  + +  +         E+ +    
Sbjct: 272  VIRVYLYGPVAN------------------GTSSSYEAYYNILEGVKRQCIVEIGKKTDG 313

Query: 574  SERTESDGAAN--LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE 631
            ++  ES  +    LI+    I + L  LG W A +  +  L+   ++  A          
Sbjct: 314  NQSLESLRSTKRMLIRMHENIIFCLENLGLWGALQACRILLSGDHSEWNA---------- 363

Query: 632  SYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDV 691
                    L++ E     VS  D  +  + N F    T +          V S    V+V
Sbjct: 364  --------LIEAEGNTSDVSMCDRYLNQATNVFAADCTRD---------GVTSNVSQVEV 406

Query: 692  IIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK 751
            +      +   + K+  LI+IL  ++   D + I+FV R+V A  L  +   L  L+  K
Sbjct: 407  L-----KEPFFSRKLLRLIEILSNFRLQPDMKCIVFVNRIVTARSLSHILQNLKFLTSWK 461

Query: 752  SASLIG-HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
               L+G H+  + M    M   + +FR G++ LL+AT V EEGLDI+ C +VIRFDL +T
Sbjct: 462  CDFLVGVHSGLKSMSRKTMNVILERFRTGKLNLLLATKVGEEGLDIQTCCLVIRFDLPET 521

Query: 811  VLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTS 870
            V ++IQSRGRAR P S+Y+ +++ GN      +   +  E  +  E  +RT         
Sbjct: 522  VASFIQSRGRARMPQSEYVFLVDSGNQKERDLIEKFKIDEARMNIEICDRTSRE------ 575

Query: 871  RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
               + D++   +Y+V +TGA ++   ++ L+  YCS+LP D Y   +P+F     +   G
Sbjct: 576  ---TFDSIEEKIYKVHATGASITSGLSISLLQQYCSKLPHDEYFDPKPKFFY--FDDSEG 630

Query: 931  PTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE 990
                 C + LP NAP  K+ G   SS+ +A++  CL A ++LH++GA ++ LLP +    
Sbjct: 631  TV---CHIILPSNAPTHKIVGTPQSSIEVAKKDACLKAIEQLHKLGALSEFLLPQQEDTN 687

Query: 991  QQEKVDQNDE 1000
            + E V  + +
Sbjct: 688  ELELVSSDSD 697



 Score =  243 bits (621), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 201/658 (30%), Positives = 288/658 (43%), Gaps = 123/658 (18%)

Query: 1333 YYVFLPPELCFIHPLPGSLVRGAQ--RLPSIMRRVESMLLAIQLKDKINYP------VPA 1384
            ++V L PELC +  +  S   G+    LPS+M R+E++L+AI+LK  ++        V A
Sbjct: 945  HFVDLAPELCELKIIGFSKDIGSSISLLPSVMHRLENLLVAIELKCILSASFSEGDKVTA 1004

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
             ++LEALT   CQE    ER E LGDA+LK+ V R  FL +    EG+LTR R   V   
Sbjct: 1005 HRVLEALTTEKCQERLSLERLETLGDAFLKFAVGRHFFLLHDTLDEGELTRKRSNAV--- 1061

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
                         +I+   F P ++ A G  P     TK+ + ++  Q  S         
Sbjct: 1062 -------------FIRDQPFDPYQFFALG-HPCPRICTKESEGTIHSQCGSHV------- 1100

Query: 1505 KNYNEYEDDDMEDGELEGD----SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
                         G+ +G     S  +  L +KT++DVVEALIG + V+ G  AA   ++
Sbjct: 1101 ------------TGQAKGSEVRCSKGHHWLHNKTVSDVVEALIGAFLVDSGFKAAIAFLR 1148

Query: 1561 WIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS 1620
            WIGI+V+ D  +V    + +     +  S+D   LE+ L  +F  +GLL++A  H S  +
Sbjct: 1149 WIGIKVDFDDSQVINICQASRTYAMLNPSMDLATLENLLGHQFLYKGLLLQAFVHPSHKN 1208

Query: 1621 SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             G      L+F    +    I       Y  + PG LTDLR+  VNN  FA VAV    H
Sbjct: 1209 GGEFGVMILQFAMTLMFPPEIGVPWRCFYPKMKPGHLTDLRSVLVNNRAFASVAVDRSFH 1268

Query: 1681 VHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
             +L   S AL    + FV  V      P      L   K PKVLGD+VES  GAI LD+G
Sbjct: 1269 EYLICDSDALSAATKKFVDFVR----TPKSERRLLEGPKCPKVLGDLVESSVGAILLDTG 1324

Query: 1741 RDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYID 1800
             D + +W++    LDP+ +   L ++PVREL+E CQ      E  AS+ G   +V+V + 
Sbjct: 1325 FDLNHIWKIMLSFLDPISSFSNLQINPVRELKELCQSHNWDFEVPASKKGRTFSVDVTLS 1384

Query: 1801 GVQVGV---AQNPQKKMAQKLAARNALA----------------VLKEKETAEAKEKG-- 1839
            G  + +   A N  KK A ++A+    A                VL+  +  EAK  G  
Sbjct: 1385 GKDMNISASASNSNKKEAIRMASEKIYARLKDQGLIPMTNSLEEVLRNSQKMEAKLIGYD 1444

Query: 1840 --------DENGKKRKNGTQTF-------------------------------------- 1853
                    D +G +     + F                                      
Sbjct: 1445 ETPIDVALDAHGFENSKIQEPFGINCSYEVRDSCPPRFEAVDAWSLSPLDFTGGQPSKVD 1504

Query: 1854 ---TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKG-WTDECVGEP 1907
                R  L +IC   +W  P + C  E GP+H K FTY V V   +    + ECVG P
Sbjct: 1505 LGTARSRLREICAANSWKPPSFECCTEEGPSHLKSFTYKVVVEIEEAPEMSFECVGSP 1562


>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
 gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
 gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
 gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
          Length = 1702

 Score =  322 bits (824), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 241/744 (32%), Positives = 362/744 (48%), Gaps = 83/744 (11%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            S   EK P + AR YQ+++ ++A ++N I +L TG GKT IAV+LI  +   L    KK 
Sbjct: 113  SPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL-GHLVLSPKKS 171

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ-RWQREFDTKQVLVMTAQ 411
            + +FL P V LV QQA+VI +   + V  +CG  G+    +   W+RE    +VLVMT Q
Sbjct: 172  VCIFLAPTVALVEQQAKVIADSVNFKVAIHCG--GKRIVKSHSEWEREIAANEVLVMTPQ 229

Query: 412  ILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
            ILL+ L+H  IKME I+LLI DECHHA ++  HPY+ +M  FY + S + RP +FGMTAS
Sbjct: 230  ILLHNLQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQ-RPRIFGMTAS 288

Query: 470  PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
            PV  KG     + +  I +LE+ L++ V +++   +L+  V  P   V  Y  A S  S 
Sbjct: 289  PVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDAS- 347

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
                 Q  +  E   +   +R         D    + L  +  + +R+      NLI   
Sbjct: 348  -----QSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHD----NLI--- 395

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQN--DERANYQLDVKFQESYLSKVVSLLQCELVE 647
                Y L  LG W A + A+  L +  N  DE        K  ++YLS            
Sbjct: 396  ----YTLLNLGLWGAIQAAKIQLNSDHNVQDEPVGKNPKSKICDTYLSMA---------- 441

Query: 648  GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
                                        E L S V       D++  AA+ +   + K+ 
Sbjct: 442  ---------------------------AEALSSGVAKDENASDLLSLAALKEPLFSRKLV 474

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
             LIKIL  ++     + IIFV R+V A  L  +   L  L   KS  L+G ++  +  + 
Sbjct: 475  QLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKSMSR 534

Query: 768  QMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            +  ETI K F+   + LLVAT V EEGLDI+ C +VIR+DL +TV ++IQSRGRAR P S
Sbjct: 535  RSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMPQS 594

Query: 827  DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT---VY 883
            +Y  +++ GN      + N + +E+ +  E   R+            S +  P     +Y
Sbjct: 595  EYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRS------------SEETCPRLDEELY 642

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            +V  TGA +S  S++ L++ YCS+LP D +   +PEF  +  ++ GG     C++ LP N
Sbjct: 643  KVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI---CRITLPAN 699

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEP 1003
            AP  ++E  +  S   A++  CL A  +LH +G   D LLPD     + E  D   + + 
Sbjct: 700  APISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDN 759

Query: 1004 LPGTARHR-EFYPEGVADILQGEW 1026
            + G    R + Y   V  + + +W
Sbjct: 760  IKGEGCSRGDLYEMRVPVLFKQKW 783



 Score =  300 bits (767), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 217/633 (34%), Positives = 320/633 (50%), Gaps = 61/633 (9%)

Query: 1219 PTGK-LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYS 1277
            P+G  L +A+ C N  D++  +V   +S + ++V  I +     S  P KE         
Sbjct: 939  PSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFS--PVKES-----STK 991

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            S+ +   + YGVEL    QPL+R + + + +NLL  R + + E +   E      Y++ +
Sbjct: 992  SHVESIYKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDE------YFIEI 1045

Query: 1338 PPELCF--IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP------ASKILE 1389
            PPEL    I  L   +      LPSIM R+E++L+AI+LK  ++  +P        ++LE
Sbjct: 1046 PPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLE 1105

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALT   C E    ER E+LGDA+LK+ VSR LFL +    EG+LTR R  +V+N  L + 
Sbjct: 1106 ALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRL 1165

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ K LQ YI+     P+++ A                  F     V  D++ +     E
Sbjct: 1166 AIKKNLQVYIRDQALDPTQFFA------------------FGHPCRVTCDEVAS----KE 1203

Query: 1510 YEDDDMEDGELEGDSSSYRV------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                + + G LE ++   R       L  KT+ADVVEAL+G + V+ G   A   +KWIG
Sbjct: 1204 VHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIG 1263

Query: 1564 IQVESDPEEV--GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
            + V+ +  +V   C +    +P +   +++   LE+ L  KF  +GLLV+A  H S    
Sbjct: 1264 VNVDFESLQVQDACIASRRYLPLTTRNNLE--TLENQLDYKFLHKGLLVQAFIHPSYNRH 1321

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
            G  CYQRLEF+GDAVLD+L+T + F  +  L PG+LTDLR+ +VNNE  A VAV   L  
Sbjct: 1322 GGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKR 1381

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
             L   S  L   I D+   +    L  G  S G    + PKVLGD+VES  GA+FLD G 
Sbjct: 1382 FLFCESIYLHEVIEDYTNFLASSPLASG-QSEGP---RCPKVLGDLVESCLGALFLDCGF 1437

Query: 1742 DTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI-- 1799
            + + VW +    LDP+     L + P++EL E CQ      E  A++     TVE+ +  
Sbjct: 1438 NLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTVELKVTK 1497

Query: 1800 DGVQVGV-AQNPQKKMAQKLAARNALAVLKEKE 1831
            +G  + V A    K+   K AA+  +  LK  E
Sbjct: 1498 NGCCLTVSATGRNKREGTKKAAQLMITNLKAHE 1530



 Score = 42.4 bits (98), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDK-GWTDECVGE 1906
            +  L++ C+   W  P + C  E GP H K F Y V +   D    T EC GE
Sbjct: 1623 KSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGE 1675


>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
 gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
          Length = 1090

 Score =  320 bits (819), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 226/651 (34%), Positives = 342/651 (52%), Gaps = 70/651 (10%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ I  E+ A
Sbjct: 280  SSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA 339

Query: 1261 ESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
             S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL  R    
Sbjct: 340  WS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRL--P 385

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESMLLAIQLKD 1376
            E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L+AI+LKD
Sbjct: 386  ETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKD 443

Query: 1377 KI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    E
Sbjct: 444  VMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDE 503

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            GQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG  P              
Sbjct: 504  GQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG-RPC------------- 549

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
               K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LIG + VEG
Sbjct: 550  ---KVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLIGAFLVEG 605

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            G  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KFK +GLL+
Sbjct: 606  GFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLL 665

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +A  H S       CYQRLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ 
Sbjct: 666  QAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSL 725

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAP 1721
            A  AV+  +H HL   S+ L   I  F          K++LEE   P            P
Sbjct: 726  AYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CP 772

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA-- 1779
            K LGDIVES  GA+ LDSG + + VW+V   LL P++T   +  +P+REL+E CQ     
Sbjct: 773  KALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFE 832

Query: 1780 EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVLK 1828
             GL       G     VEV I   + +  A N   K A+K AA+  L+ LK
Sbjct: 833  LGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 883



 Score = 88.2 bits (217), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 12/170 (7%)

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             +YQV++TGA +S   +V L+H YC  LP D +    P F         G     C+L L
Sbjct: 2    NIYQVDNTGASISTACSVSLLHCYCDNLPRDMFFTPSPVFFY-----IDGIEGIICRLIL 56

Query: 941  PCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
            P NA F + +G  C S   A++  CL AC KLH++GA TD LLP  GS + +  V  N  
Sbjct: 57   PPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSVTNNSS 116

Query: 1001 GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV 1050
               +   +   E +   +  +L+         G     L +L  Y VK +
Sbjct: 117  NNKVEDDSLREELHEMLIPAVLKP-------SGLKLDSLSNLHFYYVKFI 159


>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1058

 Score =  320 bits (819), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 225/651 (34%), Positives = 341/651 (52%), Gaps = 70/651 (10%)

Query: 1201 ASGLVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTA 1260
            +S +  D   + +H +      L + D   +  D+ G +V + H+   F+V+ I  E+ A
Sbjct: 248  SSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHNNIFFFVDGILDEINA 307

Query: 1261 ESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
             S            E+S  +YA+++K+++ +EL   +QPL++ + +   +NLL  R    
Sbjct: 308  WS------------EHSGATYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLHNRL--P 353

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI--MRRVESMLLAIQLKD 1376
            E  E EG E+L+  ++V LPPELC +  +  S   G+        M R+E++L+AI+LKD
Sbjct: 354  ETTESEGRELLE--HFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIELKD 411

Query: 1377 KI--NYP----VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +  ++P    + AS ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    E
Sbjct: 412  VMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGLDE 471

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            GQLTR R  +V+N  LY+ ++ K LQ YI+  +F P+++ APG                 
Sbjct: 472  GQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPG----------------- 514

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
               K V    +    +  +   D+ E+  L   + S+  L  K +ADVVE+LIG + VEG
Sbjct: 515  RPCKVVCNTDVEVRLHQMDIHPDNRENCNLRC-TRSHHWLHRKVIADVVESLIGAFLVEG 573

Query: 1551 GKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            G  AA   + WIGI V+ +   +      + +  S++   D   LE+ +  KFK +GLL+
Sbjct: 574  GFKAAFAFLHWIGIDVDFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLL 633

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +A  H S       CYQRLEF+GDAVL+++IT +L+ +Y ++ PG++TDLR+ AV N++ 
Sbjct: 634  QAFVHPSFSQHSGGCYQRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSL 693

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDF---------VKEVLEELLKPGFNSFGLGDCKAP 1721
            A  AV+  +H HL   S+ L   I  F          K++LEE   P            P
Sbjct: 694  AYAAVEKSIHKHLIKDSNHLTSAISKFEMYVKLSNSEKDLLEE---PA----------CP 740

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA-- 1779
            K LGDIVES  GA+ LDSG + + VW+V   LL P++T   +  +P+REL+E CQ     
Sbjct: 741  KALGDIVESCIGAVLLDSGFNLNYVWKVMLMLLKPVLTFANMHTNPMRELRELCQCHGFE 800

Query: 1780 EGLEYKASRSGNL-ATVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVLK 1828
             GL       G     VEV I   + +  A N   K A+K AA+  L+ LK
Sbjct: 801  LGLPKPMKADGEYHVKVEVNIKSKIIICTAANRNSKAARKFAAQETLSKLK 851



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
            C+L LP NA F + +G  C S   A++  CL AC KLH++GA TD LLP  GS + +  V
Sbjct: 20   CRLILPPNAAFRQADGQPCLSKDEAKRDACLKACVKLHKLGALTDFLLPGPGSRKNKVSV 79

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV 1050
              N     +   +   E +   +  +L+         G     L +L  Y VK +
Sbjct: 80   TNNSSNNKVEDDSLREELHEMLIPAVLKP-------SGLKLDSLSNLHFYYVKFI 127


>gi|218184775|gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
          Length = 1093

 Score =  319 bits (817), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 216/591 (36%), Positives = 308/591 (52%), Gaps = 60/591 (10%)

Query: 1375 KDKINYPVPAS-----KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            K++I+  VP        ILEA+T   C ETF  ER ELLGD+ LK+VV   LFL+YP KH
Sbjct: 518  KEQIHARVPPELLIHLDILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKH 577

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            EGQL+ MR + V N  L+++ + + LQ Y++ + F P RW APG + +       G  + 
Sbjct: 578  EGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETA 637

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            F               ++  Y  DD      +     +R + SKT++D VEAL+G YYV 
Sbjct: 638  FV-------------PSHRRYIRDDPSFVVGKPCDRGHRWMCSKTISDCVEALVGAYYVG 684

Query: 1550 GGKDAANHLMKWIGIQVESDP---EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            GG  AA  +M+W GI ++ D    +EV   +   C   S+ +  D   LE  LK  F  +
Sbjct: 685  GGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLC---SLSKINDIEELEAKLKYNFSVK 741

Query: 1607 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            GLL+EAITH S    GV  CYQRLEF+GD+VLD L+T+HL+ ++T++ PG LTDLR+A V
Sbjct: 742  GLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALV 801

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLG 1725
            +NENFA+  V++ +H HL+HGS  L  QI ++V+  LE   K          CK PKVLG
Sbjct: 802  SNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKES-EFLQHTTCKVPKVLG 860

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYK 1785
            DI+ESIAGA+FLD+  +  +VW++F+PLL P++TP+ L + P REL E C      L  K
Sbjct: 861  DIMESIAGAVFLDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSK 920

Query: 1786 ASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDEN 1842
             +  G +  +E+ +   D + V    +  KK A+  AA   LA LK        +  D +
Sbjct: 921  CTSKGEV-IIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKSGTQLSYSDLNDYH 979

Query: 1843 G---------------KKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVRE---------- 1877
                            K  K G     R  L  +C    WPMP +  V +          
Sbjct: 980  ILEGLSSVKKEVVLPLKMEKGG----PRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDG 1035

Query: 1878 GGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
                +   F   + ++  D   T    GE     K A+DSA++++L  L +
Sbjct: 1036 ATTTNFNSFVSTITLHIPDAT-TITFQGERRTDKKSAQDSASLMMLHKLQE 1085



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 112/197 (56%), Gaps = 9/197 (4%)

Query: 300 PEEQARP--YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-QNKKMLAVF 356
           P  Q RP  YQ++V E A + NTIA L+TG+GKT++AV+L R     ++  +  + + VF
Sbjct: 21  PHRQLRPRGYQVEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVF 80

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           L P V LV+QQ EVIRE T   V    G      W A  W+ E    +++VMT QILL+ 
Sbjct: 81  LAPTVHLVHQQFEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDA 140

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
           LRH+ + M A++LLI DECH A   HPY+ +M + Y    + +  S F   A+ VN    
Sbjct: 141 LRHAFLTMSAVSLLIFDECHRACGSHPYARIM-KIYIVEDRNELES-FSPPATIVNKYYD 198

Query: 477 SSQVDCAIKICNLESKL 493
           +  VD      NL+SKL
Sbjct: 199 AYMVD----FDNLKSKL 211


>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
 gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
 gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
            [Oryza sativa Japonica Group]
 gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
          Length = 1458

 Score =  317 bits (813), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 196/505 (38%), Positives = 283/505 (56%), Gaps = 31/505 (6%)

Query: 1375 KDKINYPVPAS-----KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            K++I+  VP        ILEA+T   C ETF  ER ELLGD+ LK+VV   LFL+YP KH
Sbjct: 895  KEQIHARVPPELLIHLDILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKH 954

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            EGQL+ MR + V N  L+++ + + LQ Y++ + F P RW APG + +       G  + 
Sbjct: 955  EGQLSDMRSKAVCNATLHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETA 1014

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            F               ++  Y  DD      +     +R + SKT++D VEAL+G YYV 
Sbjct: 1015 FV-------------PSHRRYIRDDPSFFVGKPCDRGHRWMCSKTISDCVEALVGAYYVG 1061

Query: 1550 GGKDAANHLMKWIGIQVESDP---EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
            GG  AA  +M+W GI ++ D    +EV   +   C   S+ +  D   LE  LK  F  +
Sbjct: 1062 GGIAAALWVMRWFGIDIKCDMKLLQEVKFNASHLC---SLSKINDIEELEAKLKYNFSVK 1118

Query: 1607 GLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            GLL+EAITH S    GV  CYQRLEF+GD+VLD L+T+HL+ ++T++ PG LTDLR+A V
Sbjct: 1119 GLLLEAITHPSLQELGVDYCYQRLEFLGDSVLDLLLTRHLYATHTDVDPGELTDLRSALV 1178

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLG 1725
            +NENFA+  V++ +H HL+HGS  L  QI ++V+  LE   K          CK PKVLG
Sbjct: 1179 SNENFAQAVVRNNIHSHLQHGSGILLEQITEYVRSNLECQGKES-EFLQHTTCKVPKVLG 1237

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYK 1785
            DI+ESIAGA+F+D+  +  +VW++F+PLL P++TP+ L + P REL E C      L  K
Sbjct: 1238 DIMESIAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSK 1297

Query: 1786 ASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDEN 1842
             +  G    +E+ +   D + V    +  KK A+  AA   LA LK+++    K+   + 
Sbjct: 1298 CTSKGEEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQQGLSIKQCLSK- 1356

Query: 1843 GKKRKNGTQTFTRQTLNDICLRRNW 1867
              K+ +   +  +  L  +C    W
Sbjct: 1357 -AKQLDIVTSDLQFDLTSLCFHSKW 1380



 Score =  196 bits (498), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 185/354 (52%), Gaps = 21/354 (5%)

Query: 675  GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAA 734
            GEL+ S   SG E +          G ++ KV +LI I   +  + +   +IFV+R++ A
Sbjct: 328  GELMKSE--SGSEEL-------TKRGYISSKVNTLINIFKSFGSSNEVLCLIFVDRIITA 378

Query: 735  LVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEG 793
              + +    + + S    + L G + S++  +  +Q  T+  FR G+V LL  T V EEG
Sbjct: 379  KAVERFMRGIVNFSCFSISYLTGGSTSKDALSPAVQRFTLDLFRAGKVNLLFTTDVTEEG 438

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            +D+  C+ VIRFDL +TV +Y+QSRGRAR+  S++ILMIERGNL     +     +   +
Sbjct: 439  VDVPNCSCVIRFDLPRTVCSYVQSRGRARRNNSEFILMIERGNLQQQEHIFRMIQTGYYV 498

Query: 854  RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
            +  A+ R    H    S  +S+  +    YQV+STGA ++ +  V LI  YC +LP DRY
Sbjct: 499  KNCALYR----HPNALSYDLSIQGM--YTYQVQSTGATITADCCVNLIRKYCEKLPKDRY 552

Query: 914  SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
             + +P F     E       + C L LP NA F+ + GP+ SS  L++Q V L ACKKLH
Sbjct: 553  FMPKPSF-----EVTIEDGLFKCTLTLPRNAAFQSIVGPLSSSSNLSKQLVSLEACKKLH 607

Query: 974  EMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWI 1027
            ++G   D L+P        +    +++    PGT + +E +       L G WI
Sbjct: 608  QLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELHGTTCVLALSGTWI 661



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 1/141 (0%)

Query: 309 LDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-QNKKMLAVFLVPKVPLVYQQ 367
           ++V E A + NTIA L+TG+GKT++AV+L R     ++  +  + + VFL P V LV+QQ
Sbjct: 44  VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103

Query: 368 AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
            EVIRE T   V    G      W A  W+ E    +++VMT QILL+ LRH+ + M A+
Sbjct: 104 FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163

Query: 428 NLLILDECHHAVKKHPYSLVM 448
           +LLI DECH A   HPY+ +M
Sbjct: 164 SLLIFDECHRACGSHPYARIM 184


>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
 gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
          Length = 1255

 Score =  317 bits (813), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 245/782 (31%), Positives = 360/782 (46%), Gaps = 176/782 (22%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQL+VLE+  K+NTI FLETGAGKT IA +L   + + L    +K + VFL P V L  Q
Sbjct: 2    YQLEVLEKVLKENTIVFLETGAGKTHIAAMLFNKLADRLSMPEEKRIGVFLTPTVALADQ 61

Query: 367  QAEVIREQTGYVVGHYCGEMGQ-DFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKME 425
            QA VI   T   VG Y G  GQ D WD ++W  E D+ QVLVMTAQ+L N L+ S I+ME
Sbjct: 62   QANVISSSTRLKVGVYHG--GQMDTWDVRKWSEEIDSHQVLVMTAQVLFNSLQLSAIRME 119

Query: 426  AINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIK 485
             I +LI DECH A   HPY+ VM                                     
Sbjct: 120  MIEVLIFDECHRAQNNHPYASVMK------------------------------------ 143

Query: 486  ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQ 545
                       + TI  R ELE+ VP P    + YDKA      H   K++         
Sbjct: 144  -----------IYTITSRAELEEKVPTPFYRNLYYDKA------HHCFKEL--------- 177

Query: 546  SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
               RR     +        +++  +  + E  +    +NL     AI  +L +LG W A 
Sbjct: 178  ---RRCLTDLL--------DKVNVIIYLDENKKRSKFSNLYN---AITSSLLDLGLWSAV 223

Query: 606  KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
             V              NY     F  +Y+ + V +L     EG     D +  + E  F+
Sbjct: 224  LVK-------------NYIFFSCFGLTYVLQAVEVLLKIDPEGTKPPVDNEDTNDEQRFL 270

Query: 666  EGGTNEIEEGELLDSHVVSGGEHVDVIIGA-----AVADGKVTPKVQSLIKILLKYQHTE 720
            +   N      +L S V   G+ V  I        AV  G +T KV++L+KIL++Y++ E
Sbjct: 271  KEAYN------ILKSFV--PGDSVSSISSPEDAKKAVNSGLLTSKVKALLKILVRYRNVE 322

Query: 721  DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGR 780
             FR +IFVERVV                                               +
Sbjct: 323  PFRCMIFVERVVVT---------------------------------------------Q 337

Query: 781  VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
            + +L+ TSVAEEGLD++ CN V+RFD+ +T+ ++IQSRGRARK  + Y+ ++ERGNL   
Sbjct: 338  LNVLICTSVAEEGLDVQSCNCVVRFDICRTLRSFIQSRGRARKRDATYMFLLERGNLEQE 397

Query: 841  TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
            + L    NSEE +R EA+ R  +S   + + LI  D      +   ++GA +S + AV  
Sbjct: 398  SLLMELVNSEELMRAEALSR--MSKTIEITPLIDAD----LDFFYTTSGACISTDGAVSF 451

Query: 901  IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLA 960
            I+ YCSQLP DRY   +PE  + + E       +SC +  P NAP   L GP   + +LA
Sbjct: 452  IYRYCSQLPGDRYYNPKPEIEVTKCESDNEEL-FSCTITFPPNAPLHVLTGPPKRNKQLA 510

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
            ++  CL AC++L  +GA  +   P+     ++EK+    EG P  G+ + +E +P   + 
Sbjct: 511  KKVACLEACRQLDALGALGERHPPEV----REEKM--ASEG-PGLGSTKLKELFPSIKST 563

Query: 1021 ILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS 1080
              Q +WI +  D      + H++        NG       +  ++F +LF + LD ++ +
Sbjct: 564  TYQRQWITTSTD-----IILHIYALIFHPEENG-------STYTNFGLLFDAALDDDVGN 611

Query: 1081 LK 1082
            ++
Sbjct: 612  IE 613



 Score =  290 bits (743), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 187/454 (41%), Positives = 256/454 (56%), Gaps = 34/454 (7%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S+ILEA T+  CQ+ F YE  ELLGD+ LK+ V+R L+L +   HEG+L+  R   + N 
Sbjct: 813  SQILEARTSLRCQDGFSYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNS 872

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
             L + A+++ L  Y++ + F PS W   G+   + + ++     L +     +     TD
Sbjct: 873  TLRKLAVAQDLPMYVRDEPFYPSYWVGAGM---YRQRSRKCCCRLDNLVTKESSKPRPTD 929

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
              Y  Y       G        +R + SKT +D +EALIG Y V GG D A   MK + +
Sbjct: 930  ATY--YVGKTCGQG--------HRWMCSKTTSDALEALIGAYTVGGGFDGALEFMKALQV 979

Query: 1565 QVESDPEEVGCPS-RPACVPESVLRSVDFH-----ALEDALKIKFKDRGLLVEAITHASR 1618
             V+ D   +     RP  VP   L +V FH     +LE  L   F+++ LL+EAITHAS 
Sbjct: 980  DVDFDSGLIAASQHRP--VP---LDAVQFHMPALLSLEKELCYTFQNKALLLEAITHAST 1034

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
            P + V CYQRLEF+GDAVLD L+T+HLF S+  L PG L+DLR+A+VNN+  ARVAVKH+
Sbjct: 1035 PDT-VFCYQRLEFIGDAVLDFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHR 1093

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN-SFGLGDCKAPKVLGDIVESIAGAIFL 1737
            LH +LRHGS+ L  +I  F+ +VL+    P  +  FG      PK L DIVES+AGAI +
Sbjct: 1094 LHSYLRHGSAELRAKINSFL-DVLDR--DPECSVMFGFKALSGPKALADIVESVAGAILV 1150

Query: 1738 DSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV 1797
            DSG D   +W V + LL P VTP TL  HPVRE  E C  ++   E+  S SG  AT E+
Sbjct: 1151 DSGFDFEKLWVVLKRLLSPFVTPATLSFHPVREFHELCSYKSWEFEWVQSSSG--ATAEI 1208

Query: 1798 YIDGVQ---VGVAQNPQKKMAQKLAARNALAVLK 1828
             +   +     V+    KK A+K  A   L +LK
Sbjct: 1209 LLKAGEQRFTEVSSIKNKKDARKDVAEKLLTMLK 1242


>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
 gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
          Length = 1760

 Score =  313 bits (803), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 271/902 (30%), Positives = 427/902 (47%), Gaps = 114/902 (12%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
            R YQ+++L+ A +KNTI  L TG+GKT +AV+LI+    +L  Q +  L+       FLV
Sbjct: 13   RLYQMELLDAALEKNTIVCLGTGSGKTFVAVMLIK----ELSSQTRAALSDGGKRTFFLV 68

Query: 359  PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
              VPLV QQA VI   T   +G Y G MG D W   RWQ+EFDT  VLVMTAQI L+IL+
Sbjct: 69   NNVPLVSQQAAVITTHTNLSIGEYVGAMGVDLWTRDRWQQEFDTHHVLVMTAQIFLDILQ 128

Query: 419  HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            H  + +  +NLLI+DECHHAV  HPY  +M  F  T   +  P V G+TAS   L+G  +
Sbjct: 129  HGFLPLSKVNLLIIDECHHAVGHHPYREIMKTF-DTCQVQDYPRVLGLTAS--ILQGKCA 185

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
                  ++ NLE  L S   T  D   ++++   P+EVV+E   A           Q E 
Sbjct: 186  PDSLFQRVRNLEVTLRSSAETATDLVGVDRYTTQPNEVVIESGPA-----------QNEP 234

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             + +A Q+    +       +   + EE        ER         IQ+ RAI   L  
Sbjct: 235  GLSQALQTLVDDALAFISSCKVRVSVEE-------GERDPCQVPKQAIQECRAI---LEV 284

Query: 599  LGQWCAYKVA----QSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            LG W   + A    +     ++++    +QL +++  + +  V   L C+     V   D
Sbjct: 285  LGTWATRRAAILINRELEKLIKHEWSEQHQLFLRWVHTVMHHV--HLLCDEAFKDVEDVD 342

Query: 655  AKVVDSE-----NGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
             + V  +         E   NE++     +S  VS     +    +   D        + 
Sbjct: 343  VQFVTPKVRRLLEVLRECKPNEVQSD---NSKSVSNMNSKNHYHSSRRRDNLDNQDPNTS 399

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEM 764
             ++            I+FVER   A+VL K+  E     P L+++ S+ + GH  +S+ M
Sbjct: 400  FQLC----------GIVFVERRYTAVVLNKLLQEFAKSDPDLAYISSSCITGHGLSSRGM 449

Query: 765  RT------FQMQETIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            R+      F+ QE I  +FR     LL+ TSV EEG+D+ +CN+V+RFDL K   +Y+QS
Sbjct: 450  RSRETEMAFRRQEEILRRFRMHENNLLIGTSVVEEGVDVPKCNLVVRFDLPKDYRSYVQS 509

Query: 818  RGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            +GRAR  GS Y++++++  L S    L   +  E+ LR++  E  ++   ++    +  D
Sbjct: 510  KGRARAQGSHYVMLVQQHELDSFKEDLVQFKGIEKILRQKWAEH-EVPKEEEIWEHLCDD 568

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
             VP  + +    G  V++ SA+GL++ YCS+LPSD ++ L P+  ++      G  +Y  
Sbjct: 569  MVPPYMPRQVDGGPRVTMTSAIGLVNRYCSKLPSDVFTHLTPKSRVDSVSDADG-NKYMA 627

Query: 937  KLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-----DKGSGE 990
             L LP N+   + ++GPV  + RLA++AV L AC+ LH+ G   D LLP          E
Sbjct: 628  TLYLPINSSLRDPIQGPVMPTRRLAEKAVALKACQLLHQAGELDDNLLPVGKEVIHYEEE 687

Query: 991  QQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRD------------------ 1032
            ++E   ++ +G   PGT +  + Y + +    Q    +                      
Sbjct: 688  EEEFEVEDSDGHARPGTTKRHQVYKKQIPKAFQQSLPVPAASCYLYIINMVLTEPLPEEL 747

Query: 1033 GCTGSKLFHLFMYTVKCVNNGISKD-------PFLTQVSDFAV---LFSSELDA---ELA 1079
               G KL H    T +C     SK        P  T+  + ++   L +S ++    +L 
Sbjct: 748  NIRGRKL-HPPEATTRCFGLLTSKHVPQIPCFPVYTRSGEVSISLRLCASGINVDQNQLR 806

Query: 1080 SLKNFHVRLMSIVLDVDVEP-YTTPWDPAKAYLFVPVVSDKSVDPMNEL--DWDLVEKIT 1136
             ++NFH  + S VL ++ +P Y  P D    Y  VP+      D  ++L  D++ +E I 
Sbjct: 807  LVQNFHGYVFSHVLRLEKKPLYYVPADLQSWYFVVPLNKGLLADNADQLFIDFNFLEHID 866

Query: 1137 KT 1138
            ++
Sbjct: 867  QS 868



 Score =  206 bits (525), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 169/520 (32%), Positives = 249/520 (47%), Gaps = 87/520 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  ++P P+ S IL+ALT ++  + F  ER E +GD++LK  ++ FL+  Y + HEG+L+
Sbjct: 1221 DLDSHPGPSPSLILQALTLSNAGDFFNLERLETIGDSFLKHAITTFLYCTYSRVHEGKLS 1280

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG-VLPVFDEDTKDGDSSLFDQ 1492
             MR + VSNL LY+    KGL S + A  F P+  W  PG  +    ED +D  SS  D 
Sbjct: 1281 YMRSRQVSNLNLYRLGKRKGLASRMVASIFDPAVNWLPPGFCIQNNREDKEDAGSSSKDS 1340

Query: 1493 EKSVAE--DKLGTDKN----YNEYEDDDMEDGELEGDSSSYRVLS----------SKTLA 1536
               V    + + T KN       Y+   ++   L    +  R+LS           K++A
Sbjct: 1341 SLDVEPGGNGMTTSKNPIAQVTGYDVTPLKASVLVNGDAIKRLLSYDLHMEHCIADKSIA 1400

Query: 1537 DVVEALIGVYYVEGGKDAANHLMKWIGIQV-----------ESDP--------------- 1570
            D VEAL+G Y    G  AA   + W+G++V           ++DP               
Sbjct: 1401 DCVEALLGCYLTTCGPRAAQLFLCWLGVKVSYLDQFDFAEPDTDPFDDLSGLDSSYEDWD 1460

Query: 1571 ------------------EEVG--CPSRPACVPESVLRSVD--------FHALEDALKIK 1602
                              EE G   P +P      V  + D        +   E+ ++  
Sbjct: 1461 QNPSTVCDLETFMKVSCAEEYGYIAPPKPPLF-HHVGHAQDKLSHMLSGYQQFEETVQYS 1519

Query: 1603 FKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
            F D+  +++A TH S   + ++ CYQRLEF+GDAVLD+LIT HLF       PG LTDLR
Sbjct: 1520 FNDKAYMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFKDPQQHSPGALTDLR 1579

Query: 1662 AAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--------- 1712
            +A VNN  FA +AVK+  H +L+  S  L   I +FV+   E+  + G +S         
Sbjct: 1580 SALVNNTIFASLAVKYDYHKYLKFVSPELFNIISNFVQFQQEQGEEQGMDSQTYINDEGE 1639

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRE 1770
                D + PK LGD+ ES+AGAI+LDSG     VW+V+  ++ P++      +P  PVRE
Sbjct: 1640 EESEDIEVPKALGDVFESVAGAIYLDSGMSLETVWRVYYRMMKPLIDKFSAKVPRSPVRE 1699

Query: 1771 LQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQN 1809
            L E   + A+    + +  G +  TV V   G   GV +N
Sbjct: 1700 LLEMEPETAKFSPSERTYDGKVRVTVTVIGKGQFKGVGRN 1739



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 20/146 (13%)

Query: 1243 AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGR 1302
            A   +RFYV  I Y +   S FP  +       Y+++ +YY ++YG  +    QPL+   
Sbjct: 901  ADQPQRFYVAEICYTLNPRSEFPSAD-------YATFDEYYLKRYGEAITNLDQPLLDVD 953

Query: 1303 GVSYCKNLLSPRF----------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLV 1352
              S   NLL+PR             +E ++ + E +  K   V   PELC IHP+P SL 
Sbjct: 954  HTSSRLNLLTPRHLNQKGKALPTSSAETRKAKRENLQSKQILV---PELCEIHPVPASLW 1010

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI 1378
            R A  LPS++ RV ++L+A +L+ +I
Sbjct: 1011 RKAVCLPSVLYRVTTLLIAEELRVQI 1036


>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
          Length = 685

 Score =  312 bits (800), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 196/487 (40%), Positives = 278/487 (57%), Gaps = 42/487 (8%)

Query: 1361 IMRRVESMLLAIQLKDKINYPVP------ASKILEALTAASCQETFCYERAELLGDAYLK 1414
            +M R+E++L+AI+LK+ +    P      AS++LEA+T   C E F  ER E+LGDA+LK
Sbjct: 1    MMHRLENLLVAIELKELLTASFPEGSLVTASRVLEAITTERCMEGFSLERLEVLGDAFLK 60

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            + VSR LFL Y +  EGQLT+ R   + N  LY+ A  KG  +YI+ + F P ++ A G 
Sbjct: 61   YAVSRRLFLVYDKLDEGQLTKKRSNAIKNSNLYKRAKGKGFPAYIRDEYFDPKQYFALG- 119

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR--VLSS 1532
             P                 K+V   +L    +Y E  D+ M D +      + R   L  
Sbjct: 120  RPC----------------KNVCTPELVHMIHYFE-GDNTMTDTDFTSVKCTKRHHWLHM 162

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPE----SVLR 1588
            KT+ADVVEALIG Y V+ G  AA   +KWIGI+++ D   VG      C+      S+++
Sbjct: 163  KTIADVVEALIGAYLVDSGFGAALAFLKWIGIEIDFDTSLVG----EVCIRSRNNLSLIK 218

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
             +D   LE  L   F  +GLL+EA  H S       CYQRLEF+GDAVLD++IT +L+  
Sbjct: 219  CIDIDELERLLGYNFSYKGLLLEAFAHPSFNEHNGGCYQRLEFLGDAVLDYIITSYLYSV 278

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            Y ++ PG LTD+R+  VNNE+FA VAV+H L+++L   S +L   +  +V + ++ L   
Sbjct: 279  YPDMKPGYLTDMRSMTVNNESFACVAVRHGLYMYLIQKSDSLSSAVTKYV-DFMKALFTA 337

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPV 1768
              +S    + K PKVLGDIVES AGA+ +D+G D   VW++   +L P+VTPETL + PV
Sbjct: 338  DRDSCDEPEPKCPKVLGDIVESFAGALVIDTGFDLDCVWKLMLNILQPIVTPETLCLQPV 397

Query: 1769 RELQERCQQQAEGLEY-KASR-SGNLATVEVYIDGVQV-----GVAQNPQKKMAQKLAAR 1821
            REL E CQ     L+Y KAS+ +GN   VE  + G +V     G       K A+K+A++
Sbjct: 398  RELSEVCQHHNLTLDYVKASKGNGNGYLVEAKVSGKKVSGSVGGTGTRTSIKDAKKVASK 457

Query: 1822 NALAVLK 1828
            +AL  LK
Sbjct: 458  DALLKLK 464



 Score = 50.1 bits (118), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKA 1914
            + +LN+ C +++W +P + C +E G  H K FTY + V       + EC+GEPM + + A
Sbjct: 609  KSSLNEFCQKKSWEVPSWVCYQEEGMPHQKSFTY-MAVLRLPGNISIECLGEPMKNKRLA 667

Query: 1915 KDSAAVLLLELLN 1927
             +SA+   L  LN
Sbjct: 668  MESASRGALWWLN 680


>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3b-like [Brachypodium distachyon]
          Length = 1414

 Score =  311 bits (798), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/432 (41%), Positives = 250/432 (57%), Gaps = 22/432 (5%)

Query: 1375 KDKINYPVPAS-----KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            K++I+  VP        ILEA+T   C ETF  ER ELLGD+ LK+V+   LFL+YP KH
Sbjct: 873  KEQIHARVPPELLIHIDILEAITTLRCCETFSLERLELLGDSVLKYVIGCDLFLRYPMKH 932

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            EG L+ MR + V N  L+++ + + LQ YI+   F P RW APG + +       G  + 
Sbjct: 933  EGHLSDMRSKAVCNAKLHKHGVWRSLQGYIRDSAFDPRRWVAPGQISLRPFPCNCGIETS 992

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            F     +             Y  DD      +     +R + SKT++D VEAL+G YYV 
Sbjct: 993  FVPTNGM-------------YIRDDPSFVVGKPCDKGHRWMCSKTISDCVEALVGAYYVG 1039

Query: 1550 GGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLL 1609
            GG  AA  +M+W GI+++ D + V      A     + ++ D   LE  LK  F  +GLL
Sbjct: 1040 GGIIAALWVMRWFGIEIKCDRKLVQEVKLNASYICYLPKTNDIDELEVKLKYNFSVKGLL 1099

Query: 1610 VEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            +EAITH S   SGV  CYQRLEF+GD VLD LIT++L+ ++T++ PG LTDLR+A V+NE
Sbjct: 1100 LEAITHPSAQESGVDYCYQRLEFLGDCVLDLLITQYLYVTHTDVDPGELTDLRSALVSNE 1159

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF-GLGDCKAPKVLGDI 1727
            NFA+  V++ +H HL+HGS  L  QI ++V+  LE   K   N F     CK PKVLGDI
Sbjct: 1160 NFAQAVVRNNIHSHLQHGSGVLLEQITEYVRFNLECQGKE--NEFLQHSTCKVPKVLGDI 1217

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKAS 1787
            +ESIAGAIF+D+  +  ++W + +PLL PM+TPE L + P REL E C      +  K S
Sbjct: 1218 MESIAGAIFIDTDFNVDLLWNIVEPLLSPMITPENLALPPYRELLELCSHLGYFINSKYS 1277

Query: 1788 RSGNLATVEVYI 1799
              G    +E+ +
Sbjct: 1278 SKGEEVIIEMSV 1289



 Score =  296 bits (759), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 228/793 (28%), Positives = 351/793 (44%), Gaps = 148/793 (18%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-QNKKMLAVFLVPKVPLVY 365
            YQ++V E A   NTIA L+TG+GKT++AV+L R     ++  +  +   VFL P V LV+
Sbjct: 23   YQVEVFEAALVGNTIAVLDTGSGKTMVAVMLAREHVRRVRAGEAPRRTVVFLAPTVHLVH 82

Query: 366  QQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKME 425
            QQ EVI E T        G  G   W A+ W+ E  +K++ VMT QILL+ LRH+ + M 
Sbjct: 83   QQFEVISEYTDLDATECYGASGVGGWSAEHWKEEVGSKEIAVMTPQILLDALRHAFVTMS 142

Query: 426  AINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIK 485
             ++LLILDECH A   HPY+ +M                                     
Sbjct: 143  VVSLLILDECHRACGNHPYTQIMK------------------------------------ 166

Query: 486  ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY---------DKAASLWSLHEQLKQM 536
                       V  IKDR ELE   P P+ +V +Y         D  + L  L E+   +
Sbjct: 167  -----------VYIIKDRSELESFSP-PATIVNKYYDAYLVDFEDLKSKLQILFEEFDAL 214

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
             V+++E++ +    +      +R +  +   + +YG                   +NY L
Sbjct: 215  LVSLQESSPNKFEDTNNILETSRKSLCRYHGKILYG-------------------LNY-L 254

Query: 597  GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
            G +      K+    + AL + E    +       SY  + + L+Q  L +G       +
Sbjct: 255  GPIITAEVVKIYSESIKALGDSEDCFSKAGFNLHVSYFKEALDLIQEVLPQGY-----DE 309

Query: 657  VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
            ++ SE+G  E                                 G ++ KV +LI I   +
Sbjct: 310  LMKSESGSAELSKR-----------------------------GYISSKVDTLINIFKSF 340

Query: 717  QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE-TIAK 775
              + +   +IFVER++ A  + +    + + S    + L G + S++  +  +Q+ T+  
Sbjct: 341  GSSNEVLCLIFVERIMTAKAVERFMRGIVNFSRFSISYLTGGSTSKDALSPAVQQFTLDL 400

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR G+V LL  T V EEG+D+  C+ VIRFDL +TV +Y+QSRGRARK  S+Y+LMIERG
Sbjct: 401  FRAGKVNLLFTTDVTEEGIDVPNCSCVIRFDLPRTVSSYVQSRGRARKSSSNYVLMIERG 460

Query: 836  NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLN 895
            N+     +     +E  ++  A+ R      +       +       Y V+STGA ++  
Sbjct: 461  NMEQQEQIFRIIQTEYYIKHFALYR------RANVSSYDLPMQDKHTYHVDSTGATITAE 514

Query: 896  SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS 955
              V LI  YC +LP DRY + +P + M   +       Y C L LP NA F+++ GP CS
Sbjct: 515  CCVNLIRKYCEKLPKDRYYMPKPSYEMAVEDG-----SYQCTLILPPNAAFQRIIGPSCS 569

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDMLLP------DKGSGEQQEKVDQNDEGEPLPGTAR 1009
            +  LA+Q V L ACKKLH++G   D L+P      D G+    EK          PGT +
Sbjct: 570  TGNLAKQLVSLEACKKLHQLGELDDHLVPLTEGPMDIGNSRTNEKCISG------PGTTK 623

Query: 1010 HREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVL 1069
             +E +       L G W     +    +     + +  +C   G          + F +L
Sbjct: 624  RKELHGTTSVLALTGTWTHESENVSLNA-----YRFDFRCDQEG-------ENYAGFVLL 671

Query: 1070 FSSELDAELASLK 1082
              S LD ++A  K
Sbjct: 672  MESALDDDVACSK 684


>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
          Length = 1529

 Score =  311 bits (797), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 243/803 (30%), Positives = 365/803 (45%), Gaps = 141/803 (17%)

Query: 303  QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQ--RQNKKMLAVF 356
            + R YQ ++ ++A  +NTIA L+TGAGKTLIAV+LI+ +       LQ  R  ++ +  F
Sbjct: 38   EPREYQYEIFKKAVSENTIAVLDTGAGKTLIAVMLIKHMLALEREKLQANRDYRRKVTFF 97

Query: 357  LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            LV +V LV+QQA VIR      V   CG+M  D W A  W   +D   + V+TAQI L+ 
Sbjct: 98   LVDRVHLVFQQASVIRANCDAQVKELCGDMNVDAWKADTWTEIWDNNDICVLTAQIFLDN 157

Query: 417  LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH------TTSKEKRPSVFGMTASP 470
            LR   + ++ +N+++ DECHHA K HP++L+M EFYH            +P +FGMTASP
Sbjct: 158  LRSGFLTLDRVNIMVFDECHHASKGHPFNLIMIEFYHRIYDNPVNQALDKPKIFGMTASP 217

Query: 471  VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
            ++    +S       I  LE+ L S+V T K  +EL   V  P E  + Y          
Sbjct: 218  IH----TSSKKVLESISTLETSLQSIVYTAKSTQELASAVKKPFETELFYSM-------- 265

Query: 531  EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
            + +  +  +   AA+   RR ++Q             R +       + +      Q L 
Sbjct: 266  DVINDVPPSPVHAARDYIRRERYQ-------------RSILTTLITNKINQVTGFQQCLN 312

Query: 591  AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVK--FQESYLSKVVSLLQCELVEG 648
            AI Y    LG WC+ ++ +S L          Y+ + K  F  +  +           E 
Sbjct: 313  AIIYISNNLGPWCSDRLWKSIL----------YKANTKGLFTPTLYTP----------EQ 352

Query: 649  AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
             +S +D +++           N   E +L +                   + + TPK + 
Sbjct: 353  KLSNEDQQLLQEAYELCSITDNNTTEPDLTN-------------------ERQFTPKARV 393

Query: 709  LI----KILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL--SFVKSASLIGH---- 758
            L+     IL    + + F  IIFV+R   A+ + K+  E  S+    ++   LIGH    
Sbjct: 394  LVDCLKDILANDANKQGFCGIIFVDRRHTAVAI-KILIESISVFKEDIRCDVLIGHGVKS 452

Query: 759  NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                +M+  +  E IAKFR G + LL+AT+VAEEGLDI+ CN VIRFDL KTV+AYIQSR
Sbjct: 453  GGDLQMKYTKQNEVIAKFRAGELNLLIATNVAEEGLDIQACNYVIRFDLFKTVIAYIQSR 512

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETL----RKEAIERTDLSHLKDTSRLIS 874
            GRAR+  S YILM+ R NL   + LRN   +EE +    R    +R       D S    
Sbjct: 513  GRARRKDSKYILMLNRQNLKDMSLLRNVVRAEEMMKDYCRMLPKDRNPAVMFDDAS---- 568

Query: 875  VDAVPGTVYQ------------------VESTGAVVSLNSAVGLIHFYCSQLPSDRYSIL 916
                PGT Y                   +ESTGA+++ ++A+ LI+ YC+ LPSD +   
Sbjct: 569  --GSPGTEYHPEYIKQGLSDKYLQDAFCIESTGALLTRSNAIALIYHYCATLPSDNFCNF 626

Query: 917  RPEFIMERHEKPG--------------GPTE-------YSCKLQLPCNAPFEKLEGPVCS 955
            +P +  E     G               PT        + C L LP NA  ++       
Sbjct: 627  KPVYEYEDLTNYGLSLEEIEALDLPSINPTTVAGKKNIFGCTLTLPINARIQQFRA-YDR 685

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQ--QEKVDQNDEGEPLPGTARHREF 1013
            +   A+  V L AC  L++ G     L+P   +  +   +  ++ D+   L G+      
Sbjct: 686  AKDDAKARVSLQACVALYKAGDIDSHLVPKSKTQRRVLMDLAEEKDDNGKLIGSRGRENL 745

Query: 1014 YPEGVADILQGEWILSGRDGCTG 1036
            Y +      QG+ ++ G D   G
Sbjct: 746  YKKKQPLFWQGDDLVDGTDARLG 768



 Score =  221 bits (563), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 191/684 (27%), Positives = 310/684 (45%), Gaps = 112/684 (16%)

Query: 1154 LGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQI 1213
            L  N++T   D  EY F  L+       K+        A    + + A  ++ D  A Q 
Sbjct: 826  LSFNKQTQVDDLMEYTFSFLK---CITNKT-----FTCAKNNIEYLVAPLIISDTAAQQT 877

Query: 1214 HNADMPTGKLMMAD-----SCANAGDLEGRIVTAAHSGKR-FYVESIRYEMTAESSFP-- 1265
               D       +AD     +  + G L+  +V  +   KR ++V+S++++MT  S  P  
Sbjct: 878  AKIDWVEITKSIADKYLPVNLHSNGILDTILVDTSDQKKRQYFVQSVQHDMTPLSPVPDA 937

Query: 1266 --RKEGYLGPLE---YSSYADYYKQKYGVELIFKK-----QPLIRGRGVSYCKNLLSPR- 1314
                 G    L    Y+++ DYY+ +   E + KK     QPLI+   V   ++    R 
Sbjct: 938  VSTSNGLAKKLREHGYATFKDYYEDQ---EFLSKKITDMAQPLIQVHRVPKNQSFRQVRG 994

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLL---- 1370
                ++++ E E ++      +L PELC  +P+  S+ +  Q +P IM  ++++LL    
Sbjct: 995  SSMMKKRDREPESVVH-----WLVPELCLQYPISASVYQTLQLVPDIMMHIDAVLLMHDA 1049

Query: 1371 --AIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
              A+ L  ++  P     +LEA TA+S      Y+R E LGD+ LK++ S ++F+  P  
Sbjct: 1050 KKALGLSGRMKDPY----MLEAFTASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPIS 1105

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
            +E +LT  R +M+SN  L++ A+   L  YI +       +  P  L       KD  + 
Sbjct: 1106 NEFELTESRMRMISNTALFKSAIQLRLYEYICSQNLPRRFYRPPNYL------CKDDSAE 1159

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
            +                                  S +Y  LS KTLADVVE+ +G  Y+
Sbjct: 1160 MI--------------------------------KSLTYHKLSDKTLADVVESTLGASYL 1187

Query: 1549 ------EGGKDAANHLM--------------KWIGIQVESDPEEVGCPSRPACVPESVLR 1588
                  + G  A N  +              +W   Q     E      + A       +
Sbjct: 1188 SCLGDKKQGDQALNEALHTTQRLLVPMQKMEQWSDFQTIYRDERDNKQLKMAAYDPLFDQ 1247

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
             +D   +   L  +F++  L+ EA+THAS  +S V CYQRLEF+GDAVLD  +T +LF  
Sbjct: 1248 RIDIKKVSRILGYEFQNEALIAEALTHASVTNSSVPCYQRLEFLGDAVLDFCVTNYLFEK 1307

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            Y   PPG L DLR ++VNN+  + + ++  LHVH+RH S+     ++ F + V+    + 
Sbjct: 1308 YHTAPPGTLHDLRKSSVNNDILSVLCIQLGLHVHIRHFSTTFPSAVKQFQELVVASQDEK 1367

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLP 1764
            G           PKVL D+VES+ GA+F+D+G +   V  +F    +PLLD  ++ E + 
Sbjct: 1368 GEYWLNFN---PPKVLSDVVESLIGAVFVDAGFNLDPVLGLFDRLLKPLLDDHISIEAMQ 1424

Query: 1765 MHPVRELQERCQQQAEGLEYKASR 1788
             HP+ +L  +C  Q  G +   +R
Sbjct: 1425 QHPLGKL--KCMVQEFGCKQCETR 1446


>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  311 bits (797), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 234/782 (29%), Positives = 364/782 (46%), Gaps = 100/782 (12%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ  V E AK++NTIA L+TG GKT+IA++LIR I   ++   +K+  +FL P V L 
Sbjct: 1078 RSYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHL- 1136

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
              Q +VI++ TG+ V  Y G  G D W A+ W++E     VLVMT QILL+ LR + + +
Sbjct: 1137 --QFKVIKDSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSL 1194

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
              + L+I+DECH A   HPY+ +M                                    
Sbjct: 1195 XTVCLMIVDECHRATGNHPYTKIMK----------------------------------- 1219

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE-EA 543
                        + TI+DR ELE  +P   E+   YD +        Q   +++  + ++
Sbjct: 1220 ------------IYTIEDRTELEVFIPSAKEINRFYDAS--------QFHNLDLKAKLKS 1259

Query: 544  AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
            + S          G+     K+   ++  + +R  +D A         I Y L +LG  C
Sbjct: 1260 SWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRLSNDHAK--------ILYCLDDLGLIC 1311

Query: 604  AYKVAQSFLTALQN--DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSE 661
            AY+  +  +  + N  +E   Y+      + +L +V+ ++   L    + K     VD  
Sbjct: 1312 AYEAVKVCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPH-VLHKMSLAAVDEL 1370

Query: 662  NGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
            +  V       ++G           EH     G  +        +++LI  L +      
Sbjct: 1371 DSLVSE-----QQGFFFGEWKTFFLEHKGFERGDPLPPNLFFVVMEALIVFLERV--ARK 1423

Query: 722  FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGR 780
               +IFVER++ A V+ +   ++  LS    + L G N+S +    + Q ET+  FR G+
Sbjct: 1424 VLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRSGK 1483

Query: 781  VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
            V LL AT V EEG+ +  C+ VIRFDL KTV +Y+QSRGRAR+  S +I+M+ERGN    
Sbjct: 1484 VNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTEQR 1543

Query: 841  TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
              L +   SE ++   A  R    +      +  +D+     Y V+STGA V+ +S+V L
Sbjct: 1544 DQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDS-----YFVDSTGASVTADSSVSL 1598

Query: 901  IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLA 960
            IH YC +LP D+Y   +P F     E       Y CKL LP NA F+ + GP   +  L+
Sbjct: 1599 IHRYCEKLPGDKYFTPKPFFHFTYLEG-----MYECKLTLPPNAAFQTIIGPGNKNSHLS 1653

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
            +Q VCL ACKKLH+MGA  D LLP      + + + ++       GT + +E +      
Sbjct: 1654 KQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTC 1713

Query: 1021 ILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS 1080
             L G W     D   G+ +F  +     C    I  + +    S F +L  S+LD ++ +
Sbjct: 1714 ALSGTW----GDKIDGA-IFQAYKIDFSC---NIVNELY----SGFVLLIESKLDDDVGN 1761

Query: 1081 LK 1082
            ++
Sbjct: 1762 IE 1763



 Score = 47.8 bits (112), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK 1284
            +A++  +  +L+  +V A H+G+ + +  +  + +AES F      +    Y+++A+Y+ 
Sbjct: 1908 LANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSAD-VNSSNYTTFAEYFN 1966

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLL 1311
             KYG+ L++  QPL+  +      NLL
Sbjct: 1967 NKYGIVLMYPGQPLLLLKQSHNAHNLL 1993


>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
          Length = 1622

 Score =  309 bits (791), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 211/619 (34%), Positives = 316/619 (51%), Gaps = 52/619 (8%)

Query: 1222 KLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYAD 1281
            +L +A+   +  D+   +V        F++  +  E  A S +   + ++         +
Sbjct: 852  QLQLANGSKSVHDVANSLVYVPCKETFFFISDVVKESNAYSIYKDSKNHV---------E 902

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
            +Y   +G+ L + +QPLI+ + +    NLL  +  +SE ++ E        ++V LP E+
Sbjct: 903  HYYDTFGIRLSYPEQPLIKAKQLFCLDNLLRKK-GYSELRDKE-------EHFVELPAEI 954

Query: 1342 CFIHPLPGSLVRGAQR--LPSIMRRVESMLLAIQLKDKINYPVPASK------ILEALTA 1393
            C +  +  S   G+    LPSIM R+ES+L+AI+LK  ++   P  +      +LEALT 
Sbjct: 955  CQLKIIGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVTIDHVLEALTT 1014

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
              C E F  ER E+LGDA+LK+ V R +FL Y    EGQLTR R  +V+N  LY  A+  
Sbjct: 1015 EKCNEPFSLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSNIVNNSYLYTIAVRN 1074

Query: 1454 GLQSYIQADRFAPSRWAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
             LQ++I+   F P  + A G   PV     K  + S+  Q  SV      TD    E   
Sbjct: 1075 NLQAFIRDQSFDPYHFYAVGRPCPVIC--NKQTEKSIHGQCGSV------TDGAKTEVRC 1126

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
                       S  ++ L  KT+AD+VEAL+G + V+ G  AA   +KWIGI  + +  +
Sbjct: 1127 -----------SKCHQWLRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQ 1175

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
            V      + V   +   +D  A+E+ L   F  +GLL++A  H S  + G  CYQRLEF+
Sbjct: 1176 VKSICAASKVFMPLADEIDIQAIENLLGYTFVHKGLLIQAFIHPSYNNHGGGCYQRLEFL 1235

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GDAVLD+LIT +L+  Y  L PG+LTDLR+ +VNN  FA VAV    H H+   SS L  
Sbjct: 1236 GDAVLDYLITSYLYSVYPKLKPGQLTDLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLRE 1295

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
             I  +V  +     +P        +   PK LGD+VES  GAI LD+G D +  W++   
Sbjct: 1296 SITRYVNFI----GRPDSMKRLSEEPSCPKALGDLVESCMGAILLDTGFDLNXAWRIMLS 1351

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQV---GVAQN 1809
             L P+++   L ++P REL E CQ     L++ AS+  +   VE  ++G  V     A N
Sbjct: 1352 FLKPVMSFTRLQLNPKRELHELCQSYGWHLKFLASKKDSKYLVEAKVNGENVSEAASALN 1411

Query: 1810 PQKKMAQKLAARNALAVLK 1828
              KK A ++AA+   + LK
Sbjct: 1412 INKKAAARMAAQQVHSSLK 1430



 Score =  308 bits (790), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 232/701 (33%), Positives = 345/701 (49%), Gaps = 96/701 (13%)

Query: 297 EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
           EK P + AR YQ+D+ ++A ++N + +L TG GKT IAVLLI  +   L R+ +K + VF
Sbjct: 44  EKDPRKIARKYQMDLCKKALEENVVVYLGTGCGKTHIAVLLIYEM-GQLIRKPQKSICVF 102

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           L P V LV QQA+VI +   + VG YCG+  +     + W++E +  +VLVMT QILL+ 
Sbjct: 103 LAPTVALVQQQAKVIEDSIDFKVGTYCGK-SKHLKSHEDWEKEMEQYEVLVMTPQILLHN 161

Query: 417 LRHSIIKMEAINLLILDECHHAV--KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           L H  I++E I LLI DECH+A     HPY+ +M  FY      K P +FGMTASP++ K
Sbjct: 162 LSHCYIRIEFIALLIFDECHYAQVESDHPYAEIMKIFYKPDVV-KLPRIFGMTASPISGK 220

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH---- 530
           G + +         LE+ L S V +++D+ ELE+ V  P   V  Y    +  +      
Sbjct: 221 GATVE--------GLETLLRSKVYSVEDKDELEQFVASPKVNVYYYGPGTACLTKAYSQK 272

Query: 531 -EQLKQMEVAV--EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
            E++K   V V  ++A   S+ R+            K+ L++++G           +LI 
Sbjct: 273 LEEIKHQCVMVLHKKAVDHSTLRN-----------TKKMLKRLHG-----------HLI- 309

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
                 ++L  LG    +   Q+    L+ D    +Q+                    VE
Sbjct: 310 ------FSLENLG---VFGALQASCILLKGDHYERHQM--------------------VE 340

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
             V+  D  + D     V           +  S     G + D+     + +   + K+ 
Sbjct: 341 ADVNASDDSLCDRYLSQV---------ATVFTSGCAKDGMNPDLTRVEVLKEPYFSKKLL 391

Query: 708 SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRT 766
            LI IL  +    D + IIFV R+V A  L  +   L  LS  K   L+G H+  + M  
Sbjct: 392 RLIGILSNFGVQPDMKCIIFVNRIVTARSLSYMLQHLKVLSSWKCGFLVGVHSGLKSMSR 451

Query: 767 FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
                 + KFR G + LLVAT V EEGLDI+ C +VIRFDL +TV ++IQSRGRAR P S
Sbjct: 452 KNTNIILNKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPKS 511

Query: 827 DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
           +Y  +++  N      + +   +E  +  E   R   + + D             +Y+V+
Sbjct: 512 EYAFLVDSDNQRELNLIEHFSRNEARMNDEISSRKSCTAVIDFQE---------NIYKVD 562

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
            TGA +S  S++ L+H YCS+LP D +   +P+F     +   G     CKL LP NAP 
Sbjct: 563 MTGATISSASSISLLHHYCSKLPRDEFFCPKPQFFY--FDDIDGTI---CKLVLPSNAPM 617

Query: 947 EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
            ++     SS+  A++  CL ACK LHE+GA TD LLPD+ 
Sbjct: 618 HQIVSAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQA 658



 Score = 43.9 bits (102), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 26/53 (49%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEP 1907
            +  L+++C    W  P + C +E GP+H K FT+ V V   +     E  G P
Sbjct: 1542 KSILHEVCAANCWKPPRFECCKETGPSHLKEFTFRVVVEIEETSRVIESCGAP 1594


>gi|242037143|ref|XP_002465966.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
 gi|241919820|gb|EER92964.1| hypothetical protein SORBIDRAFT_01g049110 [Sorghum bicolor]
          Length = 178

 Score =  304 bits (778), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 145/174 (83%), Positives = 163/174 (93%), Gaps = 3/174 (1%)

Query: 1757 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQ 1816
            MVTP+TLPMHPVRELQERCQQQAEGLEYKASR+GN+ATVEV++DG+Q+GVAQNPQKKMAQ
Sbjct: 1    MVTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVFVDGIQIGVAQNPQKKMAQ 60

Query: 1817 KLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVR 1876
            KLAARNAL VLKEKETA AK+  +++G+K KNG+Q FTRQTLNDICLRR WPMP YRC+ 
Sbjct: 61   KLAARNALVVLKEKETA-AKKDTEKDGEK-KNGSQ-FTRQTLNDICLRRQWPMPQYRCIN 117

Query: 1877 EGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWY 1930
            EGGPAHAKRF YAVRVNT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+ Y
Sbjct: 118  EGGPAHAKRFVYAVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNRNY 171


>gi|293334879|ref|NP_001167729.1| uncharacterized protein LOC100381417 [Zea mays]
 gi|223943645|gb|ACN25906.1| unknown [Zea mays]
          Length = 178

 Score =  301 bits (772), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 145/174 (83%), Positives = 161/174 (92%), Gaps = 3/174 (1%)

Query: 1757 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQ 1816
            MVTP+TLPMHPVRELQERCQQQAEGLEYKASR+GN+ATVEV +DG+Q+GVAQNPQKKMAQ
Sbjct: 1    MVTPDTLPMHPVRELQERCQQQAEGLEYKASRTGNVATVEVLVDGIQIGVAQNPQKKMAQ 60

Query: 1817 KLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVR 1876
            KLAARNAL VLKEKETA AK+  +++G+K KNG+Q FTRQTLNDICLRR WPMP YRC+ 
Sbjct: 61   KLAARNALVVLKEKETA-AKKDTEKDGEK-KNGSQ-FTRQTLNDICLRRQWPMPQYRCIN 117

Query: 1877 EGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWY 1930
            EGGPAHAKRF YAVRVNT+D GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+ Y
Sbjct: 118  EGGPAHAKRFVYAVRVNTSDSGWTDECIGEPMPSVKKAKDSAAVLLLELLNRNY 171


>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
 gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
          Length = 1688

 Score =  300 bits (768), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 217/633 (34%), Positives = 320/633 (50%), Gaps = 61/633 (9%)

Query: 1219 PTGK-LMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYS 1277
            P+G  L +A+ C N  D++  +V   +S + ++V  I +     S  P KE         
Sbjct: 925  PSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFS--PVKES-----STK 977

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            S+ +   + YGVEL    QPL+R + + + +NLL  R + + E +   E      Y++ +
Sbjct: 978  SHVESIYKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDE------YFIEI 1031

Query: 1338 PPELCF--IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP------ASKILE 1389
            PPEL    I  L   +      LPSIM R+E++L+AI+LK  ++  +P        ++LE
Sbjct: 1032 PPELSHLKIKGLSKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLE 1091

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALT   C E    ER E+LGDA+LK+ VSR LFL +    EG+LTR R  +V+N  L + 
Sbjct: 1092 ALTTEKCHERLSLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRL 1151

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ K LQ YI+     P+++ A                  F     V  D++ +     E
Sbjct: 1152 AIKKNLQVYIRDQALDPTQFFA------------------FGHPCRVTCDEVAS----KE 1189

Query: 1510 YEDDDMEDGELEGDSSSYRV------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                + + G LE ++   R       L  KT+ADVVEAL+G + V+ G   A   +KWIG
Sbjct: 1190 VHSLNRDLGILESNTGEIRCSKGHHWLYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIG 1249

Query: 1564 IQVESDPEEV--GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
            + V+ +  +V   C +    +P +   +++   LE+ L  KF  +GLLV+A  H S    
Sbjct: 1250 VNVDFESLQVQDACIASRRYLPLTTRNNLE--TLENQLDYKFLHKGLLVQAFIHPSYNRH 1307

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
            G  CYQRLEF+GDAVLD+L+T + F  +  L PG+LTDLR+ +VNNE  A VAV   L  
Sbjct: 1308 GGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKR 1367

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
             L   S  L   I D+   +    L  G  S G    + PKVLGD+VES  GA+FLD G 
Sbjct: 1368 FLFCESIYLHEVIEDYTNFLASSPLASG-QSEGP---RCPKVLGDLVESCLGALFLDCGF 1423

Query: 1742 DTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI-- 1799
            + + VW +    LDP+     L + P++EL E CQ      E  A++     TVE+ +  
Sbjct: 1424 NLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWDREISATKKDGAFTVELKVTK 1483

Query: 1800 DGVQVGV-AQNPQKKMAQKLAARNALAVLKEKE 1831
            +G  + V A    K+   K AA+  +  LK  E
Sbjct: 1484 NGCCLTVSATGRNKREGTKKAAQLMITNLKAHE 1516



 Score =  295 bits (756), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 231/744 (31%), Positives = 350/744 (47%), Gaps = 97/744 (13%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
            S   EK P + AR YQ+++ ++A ++N I +L TG GKT IAV+LI  +   L    KK 
Sbjct: 113  SPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL-GHLVLSPKKS 171

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ-RWQREFDTKQVLVMTAQ 411
            + +FL P V LV QQA+VI +   + V  +CG  G+    +   W+RE    +       
Sbjct: 172  VCIFLAPTVALVEQQAKVIADSVNFKVAIHCG--GKRIVKSHSEWEREIAANE------- 222

Query: 412  ILLNILRHSIIKMEAINLLILDECHHAVKK--HPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
                   H  IKME I+LLI DECHHA ++  HPY+ +M  FY + S + RP +FGMTAS
Sbjct: 223  -------HCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQ-RPRIFGMTAS 274

Query: 470  PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
            PV  KG     + +  I +LE+ L++ V +++   +L+  V  P   V  Y  A S  S 
Sbjct: 275  PVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRSALSDAS- 333

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
                 Q  +  E   +   +R         D    + L  +  + +R+      NLI   
Sbjct: 334  -----QSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHD----NLI--- 381

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQN--DERANYQLDVKFQESYLSKVVSLLQCELVE 647
                Y L  LG W A + A+  L +  N  DE        K  ++YLS            
Sbjct: 382  ----YTLLNLGLWGAIQAAKIQLNSDHNVQDEPVGKNPKSKICDTYLSMA---------- 427

Query: 648  GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
                                        E L S V       D++  AA+ +   + K+ 
Sbjct: 428  ---------------------------AEALSSGVAKDENASDLLSLAALKEPLFSRKLV 460

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTF 767
             LIKIL  ++     + IIFV R+V A  L  +   L  L   KS  L+G ++  +  + 
Sbjct: 461  QLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFLVGLSSGLKSMSR 520

Query: 768  QMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            +  ETI K F+   + LLVAT V EEGLDI+ C +VIR+DL +TV ++IQSRGRAR P S
Sbjct: 521  RSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMPQS 580

Query: 827  DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT---VY 883
            +Y  +++ GN      + N + +E+ +  E   R+            S +  P     +Y
Sbjct: 581  EYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRS------------SEETCPRLDEELY 628

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            +V  TGA +S  S++ L++ YCS+LP D +   +PEF  +  ++ GG     C++ LP N
Sbjct: 629  KVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI---CRITLPAN 685

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEP 1003
            AP  ++E  +  S   A++  CL A  +LH +G   D LLPD     + E  D   + + 
Sbjct: 686  APISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDFDN 745

Query: 1004 LPGTARHR-EFYPEGVADILQGEW 1026
            + G    R + Y   V  + + +W
Sbjct: 746  IKGEGCSRGDLYEMRVPVLFKQKW 769



 Score = 42.4 bits (98), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 1855 RQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDK-GWTDECVGE 1906
            +  L++ C+   W  P + C  E GP H K F Y V +   D    T EC GE
Sbjct: 1609 KSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGE 1661


>gi|379987680|gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
          Length = 596

 Score =  297 bits (760), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 197/483 (40%), Positives = 271/483 (56%), Gaps = 37/483 (7%)

Query: 1396 CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
            C E+F  ER ELLGD+ LK+ VS  LFLKYP+KHEGQL+  R   VSN  L++   S+ L
Sbjct: 4    CNESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTLHKVGTSRHL 63

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            Q YI+   F P RW APG L +           L   +  V   ++  DK +   ED  +
Sbjct: 64   QGYIRDGAFDPRRWTAPGQLSL----------RLCPCDHGVETSEVPLDKKFLT-EDPKV 112

Query: 1516 EDGELEGDSSSYRVLSSKTL-ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
              G+       +R + SKT+ +D VEALIG YYV GG  AA  LMKW+G++ E +P  V 
Sbjct: 113  VVGK--HCDRGHRWMGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGVEAELEPSLVE 170

Query: 1575 CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQRLEFVG 1633
               + A +     ++ D   LE  L  KF  +GLL+EAITHA+     VS  YQRLEF+G
Sbjct: 171  DAIKTAFLYSYTPKAKDIEDLELKLSYKFSVKGLLLEAITHATVLEVDVSYNYQRLEFLG 230

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            D+VLD LIT +L+  + ++ PG LTDLR+A+VNN+NFA  AVK +LHVHL+H S  L+ +
Sbjct: 231  DSVLDILITWYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESE 290

Query: 1694 IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            I  FVK V         +S  L   KAPKVLGD+VESIAGAI +D+  +   VW++ +PL
Sbjct: 291  ISAFVKLV--------SDSCSLQGNKAPKVLGDLVESIAGAILVDTKLNLDEVWKIVKPL 342

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI---DGVQVGVAQNP 1810
            L P+VTP+ L + P+REL E C      L+      G+    E+ +   D + V      
Sbjct: 343  LSPIVTPDKLELPPLRELIELCDSLGYFLKDHCMVKGDTVHAELRLQLKDELLVAEGCGQ 402

Query: 1811 QKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQT---FTRQTLNDICLRRNW 1867
             +K A+    + AL +LK+ E      KG  + KK++  +     ++  T  DIC + N 
Sbjct: 403  TRKNAK---GQAALKLLKDLE-----HKGISSKKKKQETSLVDVPYSLGTDGDICSQANN 454

Query: 1868 PMP 1870
              P
Sbjct: 455  TCP 457



 Score = 42.0 bits (97), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            +LEA+T A+  E   ++ Y+R E LGD+ L  +++ +L+ K+     G+LT +R   V+N
Sbjct: 205  LLEAITHATVLEVDVSYNYQRLEFLGDSVLDILITWYLYQKHKDIDPGELTDLRSASVNN 264

Query: 1444 LVLYQYALSKGLQSYIQ 1460
                  A+ + L  ++Q
Sbjct: 265  DNFAYAAVKRELHVHLQ 281


>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
           24927]
          Length = 1587

 Score =  295 bits (755), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 216/697 (30%), Positives = 335/697 (48%), Gaps = 98/697 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK-----MLAVFLVP 359
           R YQL++ E+AK  NTIA L+TG+GKTLIA LLIR +  +L+ + +K      + VFLV 
Sbjct: 163 REYQLELFERAKMDNTIAVLDTGSGKTLIATLLIRWML-ELELEERKSGRSPKVCVFLVN 221

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            V LV+QQA V+       VG YCG+MG D W   +W     + +++V TA IL N L H
Sbjct: 222 SVTLVFQQAAVLECNLDAQVGKYCGDMGTDLWTKSQWDARLKSDRIIVATADILWNCLTH 281

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
           S I+M  I LLI DECHH  K+H Y+ +M +FY T  +E RP +FGMTASPV+     ++
Sbjct: 282 SFIRMSDICLLIFDECHHTKKQHAYARIMRDFYETEKEENRPRIFGMTASPVD-----AR 336

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
           VD       LE  + S +CT  +   + K +P P E+ +EY    +            V 
Sbjct: 337 VDPVKAAHQLERLMHSRICTTSNPAYMRKFLPRPEEMTLEYQGVPT-----------PVI 385

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            E  ++ S  R+             + L  ++G  +                 N A  +L
Sbjct: 386 TELNSKLSPYRN------------TKCLSSIFGFID-----------------NVASRDL 416

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G WC+  + Q  LT L   E A  +       +   +  S    E V+     K+ +++ 
Sbjct: 417 GPWCSDFIWQVTLTEL---ESARQERRAGTNSASNQREGSAFNLEDVD-----KEIQLIK 468

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY--Q 717
                VE   +E +E  L                      G  +PK+  L++ L+    Q
Sbjct: 469 EARAIVEA--HEFQEPSL--------------------GSGSFSPKLFILLRFLVHAFDQ 506

Query: 718 HTEDFRAIIFVERVVAA----LVLPKVFAELPSLSFVKSASLIGHN--NSQEMRTFQMQE 771
           H E ++ IIFV R   A     +  KVF +      ++  +L+G +  +  +  TF+ Q 
Sbjct: 507 HPE-YKCIIFVTRRHTAQCIQAIFKKVFIQHGRDHLIRLGTLVGSSGQHGTDSMTFRAQT 565

Query: 772 -TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
             + +F+ G    L+AT+VAEEGLD+  CN+VIRFDL  T++ Y+QSRGRAR   S YI 
Sbjct: 566 LALHRFKKGVTNCLIATAVAEEGLDVPDCNLVIRFDLYDTMIKYVQSRGRARHATSTYIH 625

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD---TSRLISVDAVPGTVYQVES 887
           M+E+ N +H   +++ + +E+ + KE   +     L D    + +   D      Y V  
Sbjct: 626 MVEQNNWTHKRMVQDGQEAEKIM-KEFCSKLPEDRLLDKQAPTDIFGPDPTDDMTYIVPE 684

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           TGA ++LNS++ +++ +   L ++   I     +     +PG    + C++++P  +P  
Sbjct: 685 TGAKLTLNSSMQILNQFADHLGTEE-GIASEHVMYIVQAQPGH--GFKCEVKMPEISPIR 741

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            + G    S   A++     ACKKLH      D L+P
Sbjct: 742 SVLGDTARSKGAAKRHAAFEACKKLHHGKYLDDYLMP 778



 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 234/560 (41%), Gaps = 85/560 (15%)

Query: 1320 EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            E+  E E+  +   YV   P    + PLP          P+I+ R+++ L A  +     
Sbjct: 1042 ERPTEREKTQNTMAYVV--PSPFRVSPLPAKFCTMGLLFPAIITRIDAYLQAYDVCKLFK 1099

Query: 1380 YPVPASKILEALTAAS--CQE------------TFCYERAELLG----DAYLKWVVSRFL 1421
              +     LEA+T  S   QE               YER E LG    + +LK   +  L
Sbjct: 1100 VQIDLELALEAITKDSDNTQEHDEEPQNKRRGMVTNYERLEFLGGELNNCFLKLGTTIAL 1159

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDED 1481
            +   P + E      R  +V N  LY+ A+   L  YIQ++ F+   W            
Sbjct: 1160 YSTNPDQDEFAYHVERMVLVCNRSLYERAVELELYKYIQSEGFSRRLW------------ 1207

Query: 1482 TKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV--LSSKTLADVV 1539
                                        Y    +  G+  G + S R   LS K++ADV 
Sbjct: 1208 ----------------------------YPMITLIKGKAVGKTESQRTHRLSDKSMADVC 1239

Query: 1540 EALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDAL 1599
            EALIG     GG D A  ++  +  +                +PE  +  V+    E A 
Sbjct: 1240 EALIGASLCGGGLDMAARMVTTLVNKSIHKVNSFKDYYSLYTLPEYQIGPVNASQQELAD 1299

Query: 1600 KI------KFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            KI      KFK   LL  A TH S P+    + CY+RLEF+GDA++D    + L+  +  
Sbjct: 1300 KIERDMGYKFKYPRLLRSAFTHPSFPTMWEKIPCYERLEFLGDALIDMACVEDLWERFPG 1359

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
              P  LT+ + + +NN     ++VK K H HLR   + ++  ++++V +++EE      +
Sbjct: 1360 KDPQWLTEHKMSMINNRFQGALSVKLKFHTHLRAMGAHINSAVQEYV-QLIEEARIASND 1418

Query: 1712 S--FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----P 1764
            S  + +   + PKVL DI+E+  GAIF+DSG +  VV   F+  + P  T  ++      
Sbjct: 1419 SVDYWIDAKQPPKVLPDILEAYVGAIFVDSGFNYDVVTSFFRTHVRPFFTDMSIFDSFAG 1478

Query: 1765 MHPVRELQERCQQ------QAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKL 1818
             HPV  L  R  +      +    EYK      + +V ++ D + +   +   KK ++  
Sbjct: 1479 NHPVTHLTTRMTELGCSDFRIFSKEYKDRDKSYVLSVVIFHDKI-LAEGKASSKKNSRTN 1537

Query: 1819 AARNALAVLKEKETAEAKEK 1838
            AA+++L  L     AE ++K
Sbjct: 1538 AAKHSLEKLATMSAAEFRKK 1557


>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Auricularia delicata TFB-10046 SS5]
          Length = 1427

 Score =  295 bits (755), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 231/704 (32%), Positives = 345/704 (49%), Gaps = 87/704 (12%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           +AR YQ ++   A++ N IA L+TG+GKT IAV LI+ +    Q   ++ + VFL PK P
Sbjct: 15  EARRYQEEIFVAAQQGNIIAVLDTGSGKTFIAVQLIKWVTA--QPCPERKVVVFLAPKRP 72

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQD-----FWDAQRWQREFDTKQVLVMTAQILLNIL 417
           LV QQA  I+ Q      +Y G+M  D      WD ++W++EF  + VLVMT QILL++L
Sbjct: 73  LVMQQALFIQSQVPLNTQYYLGDMTVDDKKVELWDREQWRKEFTKRDVLVMTPQILLDLL 132

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGV 476
            H+  +M  I+LL+ DE HHA  KHPYS ++ +F  T    KRP +FGMTASP  + K  
Sbjct: 133 THAHWQMSKISLLVFDEAHHAQGKHPYSQILKQFVSTLPVGKRPKIFGMTASPTWDAKRA 192

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEVVVEYDKAASLWSLHEQLKQ 535
             Q+D       LES +++ +  +K+ + EL KHV  P E+V  Y            L  
Sbjct: 193 QKQLDA------LESTMNARIIAVKEHQVELSKHVSRPKELVYLYQSYDPSRRETYGLDD 246

Query: 536 MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV-SERTESDGAANLIQKLRAINY 594
            E A  E A  S              G    +  V+ V S   E D       K R  + 
Sbjct: 247 TEAAALEDAPLSP-------------GDVPTVPGVWDVLSPLLEKDVPDFSKLKTRR-DV 292

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            L  LG + A   A  + TAL     A   LD   + +  +   SL + + +E       
Sbjct: 293 LLDSLGPYAAELFAHRYFTAL-----AGKLLDAARKAAISATAKSLARVKRLEDL----H 343

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
           A++    +GFV G                             + D  V+PK++ L  +L 
Sbjct: 344 ARLAAFLSGFVPG----------------------------EIPDALVSPKLRLLGDVLC 375

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE-----MRTFQM 769
           +  H E F+ +IFVE+   A+ L ++   L  L +V  A+LIGH+ + E     M + Q 
Sbjct: 376 E-NHDEHFKCVIFVEQKHIAMTLAELLPRLSELDWVSPAALIGHSTTGETDIGGMDSKQQ 434

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
            E +  FR  +  +L+ATSVAEEGLD + C++VIRFD  + +++Y+QSRGRAR   S Y+
Sbjct: 435 AEVVKGFRASKYNVLLATSVAEEGLDFQACHLVIRFDGLQNLISYVQSRGRARHANSTYV 494

Query: 830 LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK--DTSRLISVDAVPGTVYQVES 887
           +++ R +    T     R++E  LR++    T    ++  DT    + D      Y V S
Sbjct: 495 VLLPRDDPLALTKYEGMRDAEPLLREQYAAFTAAESVEPLDTDEPSAADLALQQQYVVPS 554

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP-- 945
           TGA ++ ++A+ L+   C+  PSD+Y +LRP + +E      G   +   + LP   P  
Sbjct: 555 TGATLTYDTAIPLLELLCASAPSDQYGVLRPSYTVEEL----GEQAFRAAVALPPALPLP 610

Query: 946 -----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                F+  + P   S R A++A   AA  +LH +G F D LLP
Sbjct: 611 RAALRFDSGDEPR-KSKREARRAAAFAAVAELHSLGVFDDHLLP 653



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 240/561 (42%), Gaps = 105/561 (18%)

Query: 1206 PDREAMQ--IHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESS 1263
            PD EAM+  + N   PT +    +S A A   E  +V     G  + + +    +T +  
Sbjct: 781  PDLEAMRNFVQN---PTSRDW--ESLAAASTEEVLVVNRIRLGHLYVLVNQHTGLTVDDK 835

Query: 1264 FPRKEGYLGPLEYSSYADYYK-----QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHS 1318
                +G      ++SY  YY+     QKY + L     P+        C+ L  PR E S
Sbjct: 836  PVEVDGTCREAGFASYMAYYQDLFEGQKYTLHL-EAASPMF------CCRQL--PRLETS 886

Query: 1319 E---------EQEGE-GEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
                         GE G+ +  +     +P  +C+   L        + LP + RR+  +
Sbjct: 887  SYDISAVTGLAHVGERGKPVAMR----MVPQSVCYRLCLSSITADAVRYLPQLTRRLCDV 942

Query: 1369 LLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
              A  L    + P +  + ++EA T       F  +R E LGDA+LK  VS + F  +P 
Sbjct: 943  ARATAL----DLPGIELNALIEATTLPPAMMGFDNQRLETLGDAFLKLGVSVYAFHAFPF 998

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
            KHEGQLT +R   +SN  L   A +  LQ Y+  +  +  +W+                 
Sbjct: 999  KHEGQLTNVRIPSISNKSLLARARAFNLQRYLSVEVSSRRKWSP---------------- 1042

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
                                       + +G++E        +  +++ + VEAL+G  +
Sbjct: 1043 --------------------------RLTNGKVE--------MPRRSMQECVEALLGAAF 1068

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRG 1607
              GG   A  +   +G+     P+++        VP S LR    H L+  L  +F +  
Sbjct: 1069 ASGGVPCALAVGGKLGLCF-GPPDKLWTERYVKPVP-SPLRRPLLHELQQRLGHEFANET 1126

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            LL+EA+TH S  SS    Y+RLEF+GDA+LD  + ++LF  Y     G+L+  R  AV N
Sbjct: 1127 LLLEAVTHRSMQSSETPSYERLEFLGDALLDMAVMQYLFKKYPQATCGQLSWARQRAVCN 1186

Query: 1668 ENFARVAVKHKLHVH---LRHG---SSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAP 1721
               A +A   +LHVH   L++    +  +D   ++ ++   E++++ G+          P
Sbjct: 1187 STLAWIAAT-RLHVHECLLQNHIELAKVIDAARQELIEMSAEQVIRDGWK------MDMP 1239

Query: 1722 KVLGDIVESIAGAIFLDSGRD 1742
            K  GD+VE++  A+F+D G D
Sbjct: 1240 KPPGDLVEAVFAAMFIDMGHD 1260


>gi|414879098|tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
          Length = 595

 Score =  288 bits (738), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/384 (44%), Positives = 226/384 (58%), Gaps = 16/384 (4%)

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +T   C E F  ER ELLGD+ LK+ VS  LF+ +  KHEGQL+  RQ+ + N  LY+  
Sbjct: 1    MTTLRCCEDFSMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATLYRLG 60

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
            + + +Q YI+   F P RW APG L       +          + V ED        +  
Sbjct: 61   IERRIQGYIRDAAFDPRRWLAPGQL-----SRRPCPCECPVNSEVVTED-------IHRI 108

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            +D  +  G+       +R + SKT++D VEALIG YYVEGG  AA  ++KW  I+ E + 
Sbjct: 109  DDKSIIIGK--ACDKGHRWICSKTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIEE 166

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRL 1629
            E +      A V   + +      LE  L   F+ +GLL+EA+TH+S+  SG + CYQRL
Sbjct: 167  ELIMEALSSASVRNYLPKVDVVELLEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRL 226

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDAVLD LIT+HLF S+ +   G LTDLR+A+VNNENFA+VAVKH LH  L+H S  
Sbjct: 227  EFLGDAVLDILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGF 286

Query: 1690 LDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            L  QI ++V   LE       +    G C+ PKVLGDIVESIAGAI +DS  D  +VW+V
Sbjct: 287  LQDQITEYVNS-LESSSMDRASLLSSGPCRGPKVLGDIVESIAGAILIDSKLDLDLVWRV 345

Query: 1750 FQPLLDPMVTPETLPMHPVRELQE 1773
            F+PLL P+VTPE L +   REL E
Sbjct: 346  FKPLLSPIVTPENLELPRFRELNE 369


>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
          Length = 1541

 Score =  286 bits (732), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 213/695 (30%), Positives = 345/695 (49%), Gaps = 102/695 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKM---LAVFLVPK 360
           R YQ+++ E+AKK+NTIA L+TG+GKTLIAVLL+R +  N+++ + K M   ++ FLV  
Sbjct: 103 REYQIELFERAKKRNTIAVLDTGSGKTLIAVLLLRWVIDNEIENRAKGMPVKISFFLVAS 162

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQ  V+     + +   CG    D WD  RWQ+EF   +V+V TA+IL   L HS
Sbjct: 163 VTLVYQQFSVLESNLDHKIARLCGADNTDRWDGARWQKEFYENKVVVCTAEILNQALAHS 222

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M  INLLI DE HH  K H Y+ ++ +FY       RP +FGMTASP++ K     +
Sbjct: 223 YIRMSQINLLIFDEAHHTKKNHSYARIVKDFYLMEDPATRPRIFGMTASPIDAK-----M 277

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LES LDS + T  D   L + +  P+E V+ Y+                   
Sbjct: 278 DVIQAAWELESLLDSKIATTSD-MSLTEAIKKPAEHVMGYE------------------- 317

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                 S  R+ ++    RD  ++ E   V+           +N+ ++   I      LG
Sbjct: 318 ------SLPRTDYETDLLRDVKSRYEHIPVF-----------SNVFERAAEIA---CHLG 357

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDV--KFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
           +WCA       L A  +++   Y++D+  KF    +S+       E+VE           
Sbjct: 358 RWCA---DSYILRAFSHEKAGKYEMDIEKKFHARRVSR-------EMVE----------- 396

Query: 659 DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKYQ 717
                 ++    EI E      +V +    +D ++ A      ++ KV  L + L L+++
Sbjct: 397 ------LDDAVKEIREAV---EYVQTRRNVLDKLVHA-----DISSKVLELHRYLRLQFE 442

Query: 718 HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQ-ETI 773
              D R I+FV+R   A +L  +F+ L S   ++   L+G NN    ++  TF+ Q  T+
Sbjct: 443 RLSDHRCIVFVDRRYTARMLHILFSRL-STPHMRGHFLVGSNNGGLDEDSFTFRQQVMTL 501

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            +FR G +  L ATSVAEEGLD+  CN++IRFD+  T++ Y+QSRGRAR   S +I MIE
Sbjct: 502 MRFRKGEINCLFATSVAEEGLDVPDCNLIIRFDMYTTMIQYVQSRGRARNRNSKFIHMIE 561

Query: 834 RGNLSHATFLRNARNSEETLRKEA---IERTDLSHLKDTSRLISVDAVPGTVYQVES-TG 889
            GN +H+  L   R +E T+R+      E   L   +D+  ++ ++       +V+  +G
Sbjct: 562 IGNSTHSQTLNEVRYAEATMRRYCELLPEDRKLQGNQDSLEVL-LEREKNMETRVDPISG 620

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
           A ++  +A+ ++  + + +P++      P +++    +     +Y  ++ LP ++P    
Sbjct: 621 AKLTYANALSILAHFVTAVPTESDEPQHPTYVVSTRGQ-----KYIAEVILPGSSPLRSK 675

Query: 950 EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            G +     LA+++    AC  L   G   + L+P
Sbjct: 676 IGKIHQKKSLAKRSAAFDACVYLRTQGHLNENLVP 710



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 212/530 (40%), Gaps = 80/530 (15%)

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            + QP+I  +     +N+L+P     E++E EG   + K Y   + PEL     L   +  
Sbjct: 957  ENQPVIETQLAILRRNMLAP----PEKKEVEG---ITKAY---VCPELLKFSALTPEIAT 1006

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--------TF----- 1400
                 PSI+ R ES L+ I+  D I         L A T  S  +         F     
Sbjct: 1007 SCIVWPSIIHRFESYLICIEGCDTIGLDCGPRFALAAFTKDSDNQGEHETERVNFQRGMG 1066

Query: 1401 -CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
              YER E +GD +LK   +   F++ P ++E      R QM+ N  L+  AL   L  YI
Sbjct: 1067 ENYERLEFIGDTFLKTATTISTFIQNPNENEFAFHVRRMQMLCNKNLFGVALKLKLYEYI 1126

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            ++  F    W   G+          G   +  QEK          +N++E  + D     
Sbjct: 1127 RSIAFNRRYWYPEGL------KLLSGTGVIKGQEK----------ENFHEPRNHD----- 1165

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKW------IGIQVESDPEEV 1573
                      L  KT+ADV EALIG  Y+   +  A     W      +   V+SD   +
Sbjct: 1166 ----------LGEKTIADVCEALIGAAYLTWDQPGAWQAEHWTNAVKAVTTLVDSDDHRM 1215

Query: 1574 ----------GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP--SS 1621
                        P        +V R +    +E     +FK   LL  A  H S P  + 
Sbjct: 1216 LTWDDYRTAYSKPHYQTAEATAVQRDLA-QKVEREHAYRFKYPRLLYSAFMHPSVPYINE 1274

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
             V  YQRLEF+GDA+LD      LF  Y +  P  LT+ + A V+N+    V V    H 
Sbjct: 1275 KVPNYQRLEFLGDALLDQASITWLFNKYPDKDPQWLTEHKMAMVSNKFLGAVCVNIGFHK 1334

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
            HLRH  + L  QI  +  +++E     G    +       PK L DIVE+  GA+F+DS 
Sbjct: 1335 HLRHYHAVLQSQITAYAADLMEAKRIAGDSRDYWTTVSDPPKCLPDIVEAYIGALFIDSD 1394

Query: 1741 RDTSVVWQVF----QPLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYK 1785
             +   V + F    Q   + M   +T    HP   L    Q     ++Y+
Sbjct: 1395 FNYGEVQRFFHEHVQWYFEDMTVYDTFANNHPCTHLHNMLQTTFGCMDYR 1444


>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
            carolinensis]
          Length = 1915

 Score =  286 bits (732), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 364/755 (48%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLLI+     I  D  +  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNGKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
              LV QQ   +R  +   VG Y      + W  +RW +EFD  QVLVMT Q+ LNIL+  
Sbjct: 93   ANLVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQVALNILKRE 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLLI DECH A++ HPY  +M       S    P + G+TAS +N K   S++
Sbjct: 153  HLSLSNINLLIFDECHLAIQDHPYRAIMK---LCESCPSCPRILGLTASILNGKCDPSEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  +++ A
Sbjct: 210  E--EKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYERLLTELDDA 267

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            +              F+   +       R    +S++  SD  A L+            L
Sbjct: 268  L-------------SFLNDCNISVHCRERDSTLISKQILSDCRAVLLV-----------L 303

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K  
Sbjct: 304  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFV 363

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   +     + +   +  
Sbjct: 364  TPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKTETN 423

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 424  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 483

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 484  MEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 543

Query: 822  RKPGSDYILMIERGNLSH-ATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+YI++ +   + H    L+  +  E+ LR +  +  D +  +    +   D  P 
Sbjct: 544  RAPISNYIMLADSDKIKHFEEDLKTYKAIEKILRNKCSKSVDNNETESEPIIDDDDIFPP 603

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G I+ YC++LPSD ++ L P+   +  E P   T YS  L L
Sbjct: 604  YVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDN-TFYS-TLYL 659

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP     RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 660  PINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 716

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 717  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLKESY 751



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/253 (38%), Positives = 142/253 (56%), Gaps = 15/253 (5%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            F   E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+    
Sbjct: 1659 FENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1718

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------- 1703
               PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  +E       
Sbjct: 1719 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGM 1778

Query: 1704 --ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT-- 1759
              EL +   +     D + PK +GDI ES+AGAI++DSG    +VW V+ P++ P++   
Sbjct: 1779 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKF 1838

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKL 1818
               +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  
Sbjct: 1839 SANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSA 1896

Query: 1819 AARNALAVLKEKE 1831
            AAR AL  LK  +
Sbjct: 1897 AARRALRSLKANQ 1909



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 941  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 993

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 994  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1050

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 1051 LPSILYRLHCLLTAEELRSQ 1070



 Score = 78.2 bits (191), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1292 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1351

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1352 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKNNAD 1390



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 66/231 (28%)

Query: 1337 LPPELCFIHPLPGSLVRGAQR-LPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAA 1394
            +PP   F HP        A+R L  ++   E+       + KINY     + +L+A T A
Sbjct: 1637 IPPRCMFDHP-------DAERTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHA 1683

Query: 1395 SCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            S      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+
Sbjct: 1684 SYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAV 1743

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
                  Y +A         +P +  V D                             ++ 
Sbjct: 1744 KYDYHKYFKA--------VSPELFHVID-----------------------------DFV 1766

Query: 1512 DDDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
               ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1767 QFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1817



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1290 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1347

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1348 NCNLYRLGKKKGL 1360



 Score = 43.9 bits (102), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 30/162 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVLPV 1477
            FL+Y Q+H         + + N+++   A  K     I    F+P+     W AP   P+
Sbjct: 1435 FLEYDQEH--------IKFIDNMLMGSGAFVKK----ISLSPFSPTDNSYEWKAPKKSPL 1482

Query: 1478 ----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDS 1524
                F  DT + D S        D  K+V ED       +N  E++   D     +  D 
Sbjct: 1483 SNVQFSADTDEFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGIDAGKQSISYDL 1541

Query: 1525 SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
             + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V
Sbjct: 1542 HTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKV 1583


>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
            carolinensis]
          Length = 1918

 Score =  286 bits (732), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 364/755 (48%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLLI+     I  D  +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIRGDFNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
              LV QQ   +R  +   VG Y      + W  +RW +EFD  QVLVMT Q+ LNIL+  
Sbjct: 103  ANLVAQQVSTVRTHSDLKVGEYSSLEITETWTKERWNQEFDKYQVLVMTCQVALNILKRE 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLLI DECH A++ HPY  +M       S    P + G+TAS +N K   S++
Sbjct: 163  HLSLSNINLLIFDECHLAIQDHPYRAIMK---LCESCPSCPRILGLTASILNGKCDPSEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  +++ A
Sbjct: 220  E--EKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYERLLTELDDA 277

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            +              F+   +       R    +S++  SD  A L+            L
Sbjct: 278  L-------------SFLNDCNISVHCRERDSTLISKQILSDCRAVLLV-----------L 313

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K  
Sbjct: 314  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFV 373

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   +     + +   +  
Sbjct: 374  TPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKTETN 433

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 434  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 494  MEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553

Query: 822  RKPGSDYILMIERGNLSH-ATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+YI++ +   + H    L+  +  E+ LR +  +  D +  +    +   D  P 
Sbjct: 554  RAPISNYIMLADSDKIKHFEEDLKTYKAIEKILRNKCSKSVDNNETESEPIIDDDDIFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G I+ YC++LPSD ++ L P+   +  E P   T YS  L L
Sbjct: 614  YVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDN-TFYS-TLYL 669

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP     RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 670  PINSPLRVSIVGPPMGCTRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 726

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLKESY 761



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/253 (38%), Positives = 142/253 (56%), Gaps = 15/253 (5%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            F   E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+    
Sbjct: 1662 FENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 1721

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------- 1703
               PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  +E       
Sbjct: 1722 QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGM 1781

Query: 1704 --ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT-- 1759
              EL +   +     D + PK +GDI ES+AGAI++DSG    +VW V+ P++ P++   
Sbjct: 1782 DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWHVYYPMMRPLIEKF 1841

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKL 1818
               +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  
Sbjct: 1842 SANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSA 1899

Query: 1819 AARNALAVLKEKE 1831
            AAR AL  LK  +
Sbjct: 1900 AARRALRSLKANQ 1912



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 1054 LPSILYRLHCLLTAEELRSQ 1073



 Score = 78.6 bits (192), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKNNAD 1393



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 66/231 (28%)

Query: 1337 LPPELCFIHPLPGSLVRGAQR-LPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAA 1394
            +PP   F HP        A+R L  ++   E+       + KINY     + +L+A T A
Sbjct: 1640 IPPRCMFDHP-------DAERTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHA 1686

Query: 1395 SCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            S      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+
Sbjct: 1687 SYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAV 1746

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
                  Y +A         +P +  V D                             ++ 
Sbjct: 1747 KYDYHKYFKA--------VSPELFHVID-----------------------------DFV 1769

Query: 1512 DDDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
               ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1770 QFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1820



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1293 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1350

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1351 NCNLYRLGKKKGL 1363



 Score = 43.9 bits (102), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 30/162 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVLPV 1477
            FL+Y Q+H         + + N+++   A  K     I    F+P+     W AP   P+
Sbjct: 1438 FLEYDQEH--------IKFIDNMLMGSGAFVKK----ISLSPFSPTDNSYEWKAPKKSPL 1485

Query: 1478 ----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDS 1524
                F  DT + D S        D  K+V ED       +N  E++   D     +  D 
Sbjct: 1486 SNVQFSADTDEFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGIDAGKQSISYDL 1544

Query: 1525 SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
             + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V
Sbjct: 1545 HTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKV 1586


>gi|224576579|gb|ACN56963.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576581|gb|ACN56964.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  284 bits (727), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 157/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FD+E+     K  + +N + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFDEEQ-----KXLSKENSDVFEDGEMEDGELEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|224576607|gb|ACN56977.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576611|gb|ACN56979.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  284 bits (726), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 157/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FD+E+     K  + +N + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFDEEQ-----KPLSKENSDXFEDGEMEDGELEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|224576553|gb|ACN56950.1| At1g01040-like protein [Capsella rubella]
 gi|224576555|gb|ACN56951.1| At1g01040-like protein [Capsella rubella]
 gi|224576557|gb|ACN56952.1| At1g01040-like protein [Capsella rubella]
 gi|224576559|gb|ACN56953.1| At1g01040-like protein [Capsella rubella]
 gi|224576561|gb|ACN56954.1| At1g01040-like protein [Capsella rubella]
 gi|224576563|gb|ACN56955.1| At1g01040-like protein [Capsella rubella]
 gi|224576565|gb|ACN56956.1| At1g01040-like protein [Capsella rubella]
 gi|224576567|gb|ACN56957.1| At1g01040-like protein [Capsella rubella]
 gi|224576569|gb|ACN56958.1| At1g01040-like protein [Capsella rubella]
 gi|224576571|gb|ACN56959.1| At1g01040-like protein [Capsella rubella]
 gi|224576573|gb|ACN56960.1| At1g01040-like protein [Capsella rubella]
 gi|224576575|gb|ACN56961.1| At1g01040-like protein [Capsella rubella]
 gi|224576577|gb|ACN56962.1| At1g01040-like protein [Capsella rubella]
 gi|224576583|gb|ACN56965.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576585|gb|ACN56966.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576587|gb|ACN56967.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576593|gb|ACN56970.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576595|gb|ACN56971.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576597|gb|ACN56972.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576599|gb|ACN56973.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576603|gb|ACN56975.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576605|gb|ACN56976.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  283 bits (725), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 143/187 (76%), Positives = 157/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FD+E+     K  + +N + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFDEEQ-----KPLSKENSDVFEDGEMEDGELEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|224576591|gb|ACN56969.1| At1g01040-like protein [Capsella grandiflora]
 gi|224576601|gb|ACN56974.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  283 bits (725), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 157/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FB+E+     K  + +N + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFBEEQ-----KPLSKENSDVFEDGEMEDGELEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731 SS1]
          Length = 1596

 Score =  282 bits (721), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 235/793 (29%), Positives = 369/793 (46%), Gaps = 111/793 (13%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK-K 351
            +E ++++P    R YQ ++  QA++ N IA ++TG GKTLIA+ LI+ +   L+   + +
Sbjct: 8    AEVEKQIP----RQYQTEIFTQAQQNNVIAVMDTGTGKTLIAITLIKWMTTRLRAPGEAR 63

Query: 352  MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQ 411
             + VF+VPKVPLV QQ E I +QT      Y G +  D+W  ++W +EFD   VLVMT +
Sbjct: 64   KVVVFIVPKVPLVEQQREAIAQQTSLEARGYYGALDVDYWKREQWAKEFDEADVLVMTPR 123

Query: 412  ILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV 471
            +L ++L H+   ++ I+LLI DE HH  K + Y+ +M + YH     +RP VFGMTASP+
Sbjct: 124  VLYDLLSHAHWSVDRISLLIFDEAHHCRKNNDYNQIMRDHYHKCDPARRPKVFGMTASPI 183

Query: 472  -NLKGVSSQVDCAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSL 529
             N+K  +  +        LE  ++S V  ++D   EL KH P P E+ V YD   + W L
Sbjct: 184  WNVKNPADSLK------ELERNMNSRVLAVRDNIDELHKHAPKPKEIEVIYDSTPTSW-L 236

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
                  M   +  A +          +  RD+ +K   R  Y                  
Sbjct: 237  AYPYPTMINPIMNAER----------LVVRDSESK-RFRTRY------------------ 267

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
             A   ++G +G       A+ +L+A+      +  L+ + + S L K++S          
Sbjct: 268  EATMESVGIIG-------AEYYLSAVVPRAIESLVLNKRRELSTLRKLLS---------- 310

Query: 650  VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
                    VD     +     +IEE E + + +V    H        V    + P+V  L
Sbjct: 311  --------VDDPAPGIAKINGQIEELEGIKALLVQQSAHF-FAQSLEVRPEWLAPRVIRL 361

Query: 710  IKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNS------ 761
             +IL + Y      + IIF E+    +VL  +   +  L + ++   + GH  S      
Sbjct: 362  AEILQQCYTADPACQCIIFAEQRQVVMVLSWILRHISYLRTMIRPTFITGHGGSTHRSMR 421

Query: 762  -----QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
                 Q M   + Q  +  FRDG+  LLVATSVAEEGLD + CN+VIRFD  KT+++Y Q
Sbjct: 422  DLEDVQGMSVKEQQVAVRHFRDGKANLLVATSVAEEGLDFQPCNLVIRFDALKTMVSYAQ 481

Query: 817  SRGRARKPGSDYILM---IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
            SRGRAR+  S YI+M   +      +  F+R     +E  +K AI+  ++    D    +
Sbjct: 482  SRGRARQKASTYIIMRRSVPTEADKYTQFMRAEPQLKEAYQKRAIQDGEID--DDAGEDV 539

Query: 874  SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDR-YSILRPEFIMERHEKPGGPT 932
            S   +        STGA ++  +A+ LI   C+ LP +    +L+P + +     P    
Sbjct: 540  SESDLRLREVYTTSTGAKLTYGNAIALISRLCAVLPIEPGLPVLKPMYGLIDGASPSPDP 599

Query: 933  EY------SCKLQLPCNAPFEK----LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
             Y      S  L LP   P  +     +GP   + R A++AV   A + LH++G F D L
Sbjct: 600  AYPLGFGFSNTLILPSALPLPRDQLHRQGPYRQNKREAKRAVAFDAARSLHQLGCFDDYL 659

Query: 983  LPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCT-GSKLFH 1041
            LP + + + +E VD + E           +F P  V D+ +   I +  D    G  LF 
Sbjct: 660  LPLQENND-REGVDADGE-----------QFKPLDVDDVFESTAIDAWGDPWQEGQSLFC 707

Query: 1042 LFMYTVKCVNNGI 1054
              +    C+  G+
Sbjct: 708  YPLQFETCIVAGL 720



 Score =  157 bits (396), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 241/555 (43%), Gaps = 86/555 (15%)

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLA---IQLKDKINYPVPASKILEALTAASCQETFCYE 1403
            L   L R  +  PS++R++ +++ A   I L     YPVP  +  EAL        + Y+
Sbjct: 940  LEDELFRVVETFPSLLRQITAVVRARAVINLLKLPPYPVP--RFAEALVIPGVVPKYNYD 997

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  +F KYP +HEGQL+ ++   V N  L   A   G+  Y   D+
Sbjct: 998  RLEFLGDTFLKLATSIHIFNKYPHRHEGQLSVLKDGSVRNTYLRGKAYRLGIYHYNVTDK 1057

Query: 1464 FA-PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEG 1522
               P RW  P    V    T DG      Q                              
Sbjct: 1058 VCGPKRWMPP----VTTHTTLDGVIPYVKQ------------------------------ 1083

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI---QVESDPEEVGCPSRP 1579
              +S R    + L+D VE+L+G  Y+ GG D        IG+    +E         S P
Sbjct: 1084 --TSLR----RCLSDCVESLLGAGYLCGGLDGLLRTGTAIGLCFGGMEPWSHRYTGDS-P 1136

Query: 1580 ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1639
            +C   + LR      L+D L  +F++  LL+EA+TH + P S    YQRLEF+GDAV+D 
Sbjct: 1137 SCGASTSLR-----LLQDTLGYEFRNPLLLLEALTHPTFPDSQTPSYQRLEFLGDAVVDV 1191

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH-KLHVHLRHGSSALDRQIRDFV 1698
             I  +LF  +      +LT ++   V N     VA++   L+ H+ + +  LD +I   V
Sbjct: 1192 FIVDYLFHKFPACTAHKLTWMKHLIVCNSLLGAVAIRELGLYKHMLYMARRLDLEITLSV 1251

Query: 1699 KEVLEELLKPGFNSFG--LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD- 1755
            + VLE L    +        +   PK L D++E++ GA+ +D+  D  +   V + L   
Sbjct: 1252 R-VLEPL---SYQELAEKWWEFDPPKALNDVLEAVLGAVLVDTNYDLQLCRPVLERLFKD 1307

Query: 1756 --PMVTPETLPMHPVREL-QERCQQQAEGLEYKASR----SGNLATVEVYIDGVQVGVAQ 1808
              P+  P+ +P+HPV EL     ++    + ++ SR    S +  T  V +   ++  + 
Sbjct: 1308 ILPLAHPD-VPLHPVMELYMWAARKGCTRIRFEKSRQRDESNSKDTFHVLVHDTEISRST 1366

Query: 1809 NPQKKMAQKLAARNALAVL---------------KEKETAEAKEKGDENGKKRKNGTQTF 1853
                 +A+  AA  A A L               +E+ T EA+ + ++   KRK   Q  
Sbjct: 1367 GDSLSIAKCFAAYEAKATLSDPTSDKALHKHCNCEERRTEEARLREEKKALKRKEKDQEK 1426

Query: 1854 TRQTLNDICLRRNWP 1868
             + T  ++ +  + P
Sbjct: 1427 AKLTGKNVHIDMSSP 1441


>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1827

 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 219/708 (30%), Positives = 339/708 (47%), Gaps = 121/708 (17%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI-CNDLQRQNK---KMLAVFLVPK 360
            R YQ ++  +A  KN IA L+TG+GKTLIAVLL+R I   +L+ + K   K ++ FLV  
Sbjct: 389  RQYQTELFNEAINKNVIAVLDTGSGKTLIAVLLLRHIFAQELEDRAKGLPKRISFFLVDS 448

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
            V LV+QQ  V++      +  +CG+MG D W    W++  D   V+V TA++L + L HS
Sbjct: 449  VQLVFQQHAVLKANLDQPMEMFCGDMGIDLWKKSTWEKHLDKNMVIVCTAEVLRHCLHHS 508

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-TSKEKRPSVFGMTASPVNLKGVSSQ 479
             + M  INLLI DE HHA K H Y+ ++ +FY T   K   P +FGMTASPV+     ++
Sbjct: 509  FLSMAQINLLIFDEAHHAKKDHAYARIIKDFYVTHEDKHTLPKIFGMTASPVD-----AR 563

Query: 480  VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
            VD       LES L S +CT  D K L++       + V+ ++AA+   L          
Sbjct: 564  VDVRKAAAELESILHSQICTASDPKLLQQ------TITVKQEQAAAYAPL---------- 607

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG-- 597
                                  G + E      + ER +++         + +N+A    
Sbjct: 608  ----------------------GPRFETPLYAQMFERFKNNTVLR-----KPLNFAFDAT 640

Query: 598  -ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
             ELG WCA +V    L      E    +L  K +  Y                     AK
Sbjct: 641  KELGAWCADQVWPFCL-----GEEECKKLQAKTERKY--------------------HAK 675

Query: 657  VVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL- 714
             +      +E    +I+E  +++ +HV    +  D   G+      ++ KV  L++ L  
Sbjct: 676  KIQEPLAVLEKHKAQIQEARDIMKAHVYDAPDFTDKTAGS----NNLSSKVVLLVRYLRE 731

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAELPSL--SFVKSASLIGHNNSQE---MRTFQM 769
            +++   D +AIIFV +   A +L K+F++ P++    ++  +L+G  +       ++F+ 
Sbjct: 732  RFERPTDDKAIIFVNQRYTARLLAKLFSQ-PNIGTPHLRCGTLVGTRSGDAGDLNQSFRD 790

Query: 770  QE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
            Q  T+  FR G +  L ATSVAEEGLD+  CN+V+RFDL  T++ YIQSRGRAR   S Y
Sbjct: 791  QVLTMGNFRKGNINCLFATSVAEEGLDVPDCNLVVRFDLYTTLIQYIQSRGRARHQNSRY 850

Query: 829  ILMIERGNLSHATFLRNARNSEETLRK--EAIERT--------DLSHL--KDTSRLISVD 876
            I M E GN  HAT +   R +E  LRK  EA+           D+ H   K+ S  I   
Sbjct: 851  IHMYEAGNTEHATIMLEVRKNENILRKFCEALPENRKLTGNDYDMDHFLAKEKSHRI--- 907

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
                  Y+  STGA ++   ++ ++  +   LP  + + L+PE+I+  H +      + C
Sbjct: 908  ------YKT-STGAKLTYKMSLTVLANFVDSLPHAQDTNLQPEYIITVHNR-----HFIC 955

Query: 937  KLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            +  LP  +PF    G  CS+ ++A+ +     C  L +     + LLP
Sbjct: 956  ETILPEGSPFRGSVGRPCSTKQVAKCSAAFETCLGLVKCKLLDEHLLP 1003



 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 207/497 (41%), Gaps = 95/497 (19%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            Q ++    +S  +NLL       +E +   EEI  K + +  P +   I P+P S+V  A
Sbjct: 1257 QRVVEAEFISLRRNLL-------DEFDTPEEEIPKKCFVILEPLK---ISPIPTSVVAMA 1306

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+I+ R+ES L+A++    +N  +     LEA T  S         Q  F       
Sbjct: 1307 YVFPAIIHRLESYLIALEACQLLNLKIRPDLALEACTKDSDNSEDHGTEQVNFQRGMGNN 1366

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF  +P+  E      R  ++ N  L   A+   L  YI++
Sbjct: 1367 YERLEFLGDCFLKMATSISLFGIHPENDEYSYHVDRMMLICNKNLKNNAVKLKLYQYIRS 1426

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G++                                       ++ G+  
Sbjct: 1427 QAFSRRAWYPEGLV---------------------------------------LKQGKTA 1447

Query: 1522 GDSSSYRVLSSKTLADVVEALIG----VYYVEGGKDAANHLMKWIGIQVESDPEEVGC-- 1575
               ++++ L  K++ADV EALIG     Y+     DAA   ++ +   V S+  +V C  
Sbjct: 1448 AAPTTHK-LGDKSIADVCEALIGAALLTYHESKDMDAA---VRAVTELVSSENHQVTCFA 1503

Query: 1576 --PSRPACVPESVLRSVDFH-----ALEDALKIKFKDRGLLVEAITHASRPSS--GVSCY 1626
                        + ++ +        LE      FK   L   A TH S P S   V  Y
Sbjct: 1504 DYYKLYKKPKYQLAQATEMQRNLAAQLEQEHPYHFKYPRLARSAFTHPSYPYSYEHVPSY 1563

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GD++LD      L+ ++ +  P  LT+ + A V+N+    + V    H HL   
Sbjct: 1564 QRLEFLGDSLLDMACINFLYHAFPDKDPQWLTEHKMAMVSNQFLGALCVSLGFHRHLLLF 1623

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGLG----DC---------KAPKVLGDIVESIAG 1733
            ++   +QI D+V ++ E   +   ++   G    DC         + PK L D+VE+  G
Sbjct: 1624 NAGFQKQISDYVTDITEARTQAEADAVRAGKSPQDCNPDYWTSVRQPPKCLPDVVEAYIG 1683

Query: 1734 AIFLDSGRDTSVVWQVF 1750
            AIF+DS  + +V+   F
Sbjct: 1684 AIFVDSEYNYAVIEDFF 1700


>gi|168046558|ref|XP_001775740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672892|gb|EDQ59423.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 792

 Score =  281 bits (719), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 195/627 (31%), Positives = 304/627 (48%), Gaps = 66/627 (10%)

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
            N  +  G L M +      DLE  +VT A++G   +V  I ++++  S   +  G     
Sbjct: 210  NEALDGGGLRMRNGIFQEHDLEDAVVTCANNGLPCFVSGILHDLSGSSFCSQSAGR---- 265

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            +  SY+DYY  +   +L +  QPL++G  +    N +      S     +  E ++    
Sbjct: 266  KQISYSDYYFHECKYKLEYPDQPLLKGYRLVRAGNYVRRTSAVSNGDSVKPWETME---- 321

Query: 1335 VFLPPELCFIHP-LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
              LPPE+C +H  L G L RG  RLPSI+  +E  L+A +L++ I  P+   K+ EALT+
Sbjct: 322  --LPPEVCILHVGLKGKLCRGGMRLPSILHSLEMSLVAAELRNNIGSPLSCFKVQEALTS 379

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             +C+    YE  ELLGD+ L ++    +++ +P      L   R  +VSN  LY+  L+ 
Sbjct: 380  GACEGNHSYETLELLGDSVLNFIGGVHMYIDFPSCTSELLHSYRHDLVSNRNLYKCGLAC 439

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  YI A+      W  PG                                        
Sbjct: 440  GLPGYIFAELLNTKTWVPPG---------------------------------------P 460

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---ESDP 1570
             +ED  L   S   +V+  KTLADVVEALIGV ++ G  ++A   M W+ + +   E  P
Sbjct: 461  ALED--LPQKSPDGQVIGLKTLADVVEALIGVTFLHGDLNSAVKTMVWLQVPIPFPEKIP 518

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS---SGVS--- 1624
            E +    +      +  +  D   LE  +  +FK + LL+ A  +    +   SGV    
Sbjct: 519  EVIIADIQELMEARNTFKDHDIVTLEKKIGYQFKCKSLLLSAFDYGDEVTFTQSGVPRGS 578

Query: 1625 -CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
              +QRLEF+GD+VLD LI +H    Y+   P +L DLR A VN+ENFA  A++H  H +L
Sbjct: 579  FQFQRLEFLGDSVLDFLIMRHFVQLYSAFNPEQLNDLRQATVNSENFACTAIRHGFHHYL 638

Query: 1684 RHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT 1743
            +  S  L  +I  +   V  E    G + FG+    +PK +GD+++++AG+I LDS  D 
Sbjct: 639  KRMSPILRDEIELYAASVHRE----GGSPFGIPSRASPKAIGDLMQTLAGSILLDSNFDH 694

Query: 1744 SVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ 1803
             +VW+V +PLL P+ TP+T+  HP R L+  C +Q   LE +  +        VYI+ + 
Sbjct: 695  DLVWKVLKPLLSPLATPKTVMRHPRRLLEALCHKQDLKLELQTIQLEGAVEARVYINQIC 754

Query: 1804 VGVAQNPQKKMAQKLAARNALAVLKEK 1830
            V  +++ +  +A++LAA  A   L  K
Sbjct: 755  VANSKHYEPTVARRLAAFTAFRSLSPK 781


>gi|356571230|ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score =  281 bits (719), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 199/621 (32%), Positives = 319/621 (51%), Gaps = 83/621 (13%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFK 1294
            LE  +V   H+G  + + +         +    +G  G    ++Y +++K+++G+EL F+
Sbjct: 186  LENCVVYTPHNGSIYIIYTTDGTKKLNGNSTLNQGLKG---ITTYKEHFKKRHGIELGFE 242

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELC--FIHPLPGSLV 1352
             Q L+ GR +   +N L    + +E+  G+    +D      LPPE+C   + P+    +
Sbjct: 243  HQSLLHGRNLFKVENYLLKTRQKTEK--GKNMSSVD------LPPEVCSVIMSPISIGTI 294

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETFCYERAEL 1407
                 +PSIM  +E +L+A  LK  +        +P SK+L+A+TA  C+E + Y+  E 
Sbjct: 295  YSFSFIPSIMHWLEGLLVAFNLKRMLLDHFTPNDIPISKVLQAITAKGCEEAYDYDYLET 354

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGD+YLK++VS+ LF       EG L+  R+ ++SN VL++Y  ++ L  +I+ D+F P 
Sbjct: 355  LGDSYLKYIVSQQLFKTNQNDREGALSDKRKNIISNDVLFKYGCTRPLPGFIRKDKFDPK 414

Query: 1468 RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
            +W  PG          D  +S+      + + KL                     DSS  
Sbjct: 415  QWDVPG----------DKSNSIL-----LLKQKL---------------------DSSRT 438

Query: 1528 RVLSSKT-------LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
            RV   KT       +ADVVEALIG +     + AA   + WIGI V+++          +
Sbjct: 439  RVYVRKTREIDLGIIADVVEALIGAFISTEDEKAALSFINWIGINVDTNIMPYENERHIS 498

Query: 1581 CV-PESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS--RPSSGVSCYQRLEFVGDAVL 1637
             + PE ++++     L+  L   FKD  LLVEA+TH+S  RP    +CY+RLEF+GDAVL
Sbjct: 499  IIAPEELVKA---KLLKSRLNYSFKDPYLLVEALTHSSGKRPEIR-TCYERLEFLGDAVL 554

Query: 1638 DHLITKHLFFSYTN--LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            D++IT H +  Y+N        T++R+ +VNNE +A  A+K KL  H+       D  ++
Sbjct: 555  DYVITMHFYKEYSNDKFSAEFFTNMRSISVNNECYALSAIKAKLDEHI-----LCDSVVK 609

Query: 1696 DFVKEVLEELLKPGFNS-FGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            + + + +E +      S FG   +    +VL D++ESIAGAIF+DSG    VV+Q  +PL
Sbjct: 610  NNIAQTMEGVKNLSLESTFGWELETYFCQVLADVIESIAGAIFVDSGYKKEVVFQSIKPL 669

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQAEGLE-YKASRSGNLATVEVYIDGVQVGVAQNPQK 1812
            L+P+VTPET   HP+ EL E CQ++   ++ Y   R     +V + +    +    NP  
Sbjct: 670  LEPLVTPETARRHPISELHELCQKKGYKMKVYPPVRVNGETSVTIEVKTNGITYKNNPPA 729

Query: 1813 K-----MAQKLAARNALAVLK 1828
            K      A+KLAA++ L  +K
Sbjct: 730  KASNNDTARKLAAKDVLKQIK 750


>gi|224576609|gb|ACN56978.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  281 bits (718), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 156/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FD+E+     K  + +  + +ED +MEDGELEGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFDEEQ-----KPLSKEXSDVFEDGEMEDGELEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor
           FP-101664 SS1]
          Length = 1459

 Score =  280 bits (717), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 224/716 (31%), Positives = 343/716 (47%), Gaps = 96/716 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++  +A++ N IA L+TG+GKT I+ LLI+ I   D+   N   L VFLVPKV L
Sbjct: 15  RRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIKWIAARDVGHNN---LIVFLVPKVAL 71

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ E I +QT   V  + G    D  D   W+ EF+   V VMTAQI LN++ HS   
Sbjct: 72  VQQQGEFIAKQTSLRVRQFSGATAHDMGDRDGWKTEFENSDVFVMTAQIFLNLITHSHWG 131

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDC 482
           ++ + L++ DECHH  K H Y+ +M E++ T     RP +FGMTASP+ N K      + 
Sbjct: 132 IDKVTLIVFDECHHTRKNHAYNGIMREYFQTPVG-SRPKIFGMTASPIWNPK------NA 184

Query: 483 AIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
           A  +  LE  LD+ V  +K+   EL  H P P+E++  Y                 +   
Sbjct: 185 AESLATLERNLDAKVIAVKEHMDELSGHSPKPTEIIQVYPAPP-------------IKYP 231

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ 601
           E    S RR     +   D  A+       G+           ++ +     Y+LG  G 
Sbjct: 232 EYPSKSLRR----LLNLEDTPAE------IGIP-------VDKILTRYEVTLYSLGPFGA 274

Query: 602 --WCAYKVAQSFLTALQN--DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
             +   +V Q     +Q+  D   +Y    ++ ++  +  VS    E V   + K   + 
Sbjct: 275 ELFLYTEVKQRVAQMIQDALDLSMDYLTPAQYAQTARAGPVSPDMLENVPQKL-KDLHRT 333

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
           ++S   F E  T E            SG + + + +         +PKV+ L + L + +
Sbjct: 334 LESFRDFFE--TPE------------SGSDPIPIPMSWC------SPKVRKLAETLFE-R 372

Query: 718 HTEDFRAIIFVERVVAALVLPKVFAELPSLSFV-KSASLIGHN------NSQEMRTFQMQ 770
           +T+ F+ IIFVE+   A  L  +   +P L+ V KS  L+GH       +++ M T   Q
Sbjct: 373 YTDSFQGIIFVEQRHVATCLAVILERIPLLAHVIKSEQLVGHGKDTAKAHTKGMGTRNQQ 432

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           +T+  FR+  + +LVATSVAEEGLD   C++VIRFD  + ++ Y+QSRGRAR   S +I+
Sbjct: 433 DTVKMFRERAINVLVATSVAEEGLDFPACDLVIRFDPVQHMVGYVQSRGRARHKTSTFII 492

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLS-----HLKDTSRLISVDAVPGTVYQV 885
           M++ G  + A        SE  L++   ER DL+       ++ +     D      Y V
Sbjct: 493 MLQEGAQAQAERYLQFSQSEPHLKQVYQER-DLALKAIVEEEEDTHDDPEDLAERERYVV 551

Query: 886 ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
            STGAV++  SA+GL++  CS +P D+++ +           P    + S  + LP + P
Sbjct: 552 PSTGAVLTYTSAIGLLNHLCSLIPRDKFTPM---------HVPTYTGDVSATVHLPSSLP 602

Query: 946 FEK----LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS-GEQQEKVD 996
                   +GP   S + A++A    A K LH +  F D LLP K + G + E  D
Sbjct: 603 LPADLLVYQGPPRRSKKEAKRAAAFLAVKSLHVLNVFDDYLLPTKTARGRENEDSD 658



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 231/536 (43%), Gaps = 94/536 (17%)

Query: 1257 EMTAESSFPRKEGYLGPLEYSSYADYYKQKYG----VELIFKKQPLIRGRGVSYCKNLLS 1312
            E + ESSFP            +Y DY+  KY       +I K  P + G  V   +N  S
Sbjct: 833  EGSRESSFP------------TYRDYWINKYTRKGFAPIISKTGPCVEG--VIIDRNASS 878

Query: 1313 PRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAI 1372
                +S E   +      K   V  P E+C    +P  + R    LP +  RV  +  A 
Sbjct: 879  ---SYSLENVVDPASPRQKPATVIFPLEICRWALMPEHIYRTFFVLPELCHRVTDVWRAH 935

Query: 1373 QLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
            + +  +  P  A  +L +ALT  S    F  +R E LGDA LK      L+ KYP +HEG
Sbjct: 936  EARIALKLPPIADDLLVQALTLPSTNAQFNNQRLETLGDAVLKLSAVVHLYNKYPHRHEG 995

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
            QL  M++  V+N  L    + + L+ ++ ++  +   W                      
Sbjct: 996  QLDAMKRVSVANRTLLARGVERSLERHLSSEPQSMRMW---------------------- 1033

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
                           Y    +DD+          + R    K++ D +EAL+G  +  GG
Sbjct: 1034 --------------RYVISSEDDLFSAR--PSRQAPRRFPRKSMQDCMEALLGASFATGG 1077

Query: 1552 KDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLR-----SVDFHALEDALKIKFKDR 1606
             D A H    +G+         G P+ P  +   +L      S  F  L++AL  +F+  
Sbjct: 1078 IDMALHAGTVLGVSF-------GGPT-PWNIRYGLLMPKSEPSPLFLTLQEALGYRFEHG 1129

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             LL+EA+TH S  S+  S YQRLEF+GDA++D ++T++L+  +     G+L+  R+ AV 
Sbjct: 1130 QLLLEAVTHPSFGSADSSSYQRLEFLGDALIDMVVTEYLYKKFPEATSGQLSWARSRAVC 1189

Query: 1667 NENFARVAVK----HKL----HVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
                A +AV     HKL    +V L   S A+ R +    +   EE++  G+        
Sbjct: 1190 GTALASLAVNRLGLHKLLLINNVEL---SIAIGRYVPILEEITNEEIILDGWKH------ 1240

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV---TPETLPMHPVREL 1771
              PK L D+ ES+ GA+F+D   +      V + +++ ++    P+ LP  PV +L
Sbjct: 1241 DPPKALSDVFESVMGALFVDCDYNYDKAAAVIEMVMEDLIGALRPD-LPRDPVSQL 1295



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)

Query: 1361 IMRRVESMLLAIQLKDKINYPVPASKIL-EALTAAS--CQETFCYERAELLGDAYLKWVV 1417
            +M + E   L + L++ + Y     ++L EA+T  S    ++  Y+R E LGDA +  VV
Sbjct: 1105 LMPKSEPSPLFLTLQEALGYRFEHGQLLLEAVTHPSFGSADSSSYQRLEFLGDALIDMVV 1164

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK-GLQSYIQADRFAPSRWAAPGVLP 1476
            + +L+ K+P+   GQL+  R + V    L   A+++ GL   +  +    S  A    +P
Sbjct: 1165 TEYLYKKFPEATSGQLSWARSRAVCGTALASLAVNRLGLHKLLLINNVELS-IAIGRYVP 1223

Query: 1477 VFDEDTK----------DGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS 1526
            + +E T           D   +L D  +SV    L  D +YN Y+               
Sbjct: 1224 ILEEITNEEIILDGWKHDPPKALSDVFESVM-GALFVDCDYN-YDK-------------- 1267

Query: 1527 YRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                ++  +  V+E LIG    +  +D  + LM W+ 
Sbjct: 1268 ----AAAVIEMVMEDLIGALRPDLPRDPVSQLMVWVA 1300


>gi|452839019|gb|EME40959.1| hypothetical protein DOTSEDRAFT_56023 [Dothistroma septosporum
           NZE10]
          Length = 1549

 Score =  280 bits (716), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 221/706 (31%), Positives = 331/706 (46%), Gaps = 119/706 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND-LQRQ---NKKMLAVFLVPK 360
           R YQL++ E+AKK+NTIA L+TG+GKTLIAVLL+RS+ +D L+++   +   ++ FLV  
Sbjct: 102 REYQLELFERAKKENTIAVLDTGSGKTLIAVLLLRSVIDDELEKRAAGHAPKISFFLVAS 161

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQ  V+     + V   CG    D W A  W + F   +V+V TA IL   L  S
Sbjct: 162 VTLVYQQFSVLDCNLDHKVIRLCGADNVDRWTAAHWTQIFHENKVVVCTADILFQCLSRS 221

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + M+ INLLI DE HH  K H Y+ ++ +FY    +E RP +FGMTASP++ K     V
Sbjct: 222 FLSMKQINLLIFDEAHHTKKNHAYARIIKDFYIPEQRELRPRIFGMTASPIDAK-----V 276

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLW---SLHEQLKQME 537
           D       LES LD  + T +D   L + +  P+E ++ YD         SL + LK   
Sbjct: 277 DVIQAASELESLLDCKIATTQD-MSLAEAIKRPTEEILRYDALPQRCFETSLLQDLKSRY 335

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
             +E  A S  R             A E  R                             
Sbjct: 336 GNIEVFASSFQR-------------AAEVARH---------------------------- 354

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
            LG+WCA       L A  +++ + Y ++V+                       K  A+ 
Sbjct: 355 -LGRWCADNF---LLHAFSHEKSSKYSVEVE----------------------KKWHARK 388

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKY 716
              +   ++    EI+      +H +    HV   +        ++ KV+ L   L L++
Sbjct: 389 GRQKVAELDEAVKEIQAA----THYIQQRSHV---LDELSRTQDLSSKVRQLDHYLRLQF 441

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAEL---PSLSFVKSASLIGHNN---SQEMRTFQMQ 770
           +     RAI+FV+R   A +L  ++  L       +++   LIG N     ++  +F+ Q
Sbjct: 442 ERESTHRAIVFVDRRYTARLLHNLYTRLRGQEGYEYLRGHFLIGSNGGSIDEDSFSFRQQ 501

Query: 771 -ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
             T+ KFR G +  L ATSVAEEGLD+  CN+VIRFD+  T++ Y+QSRGRAR   S +I
Sbjct: 502 VMTLMKFRKGELNCLFATSVAEEGLDVPDCNLVIRFDMYNTMIQYVQSRGRARNQHSKFI 561

Query: 830 LMIERGNLSHATFLRNARNSEETLRKEAIERTD----------LSHLKDTSRLISVDAVP 879
            MIE GN +H   L   R  E ++R+   +  +          L  L D  + I V  VP
Sbjct: 562 HMIENGNCAHQQTLGEVRWQENSMRRFCDQLPEDRKLQGNEDHLEMLLDKEKNIQVRIVP 621

Query: 880 GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSCKL 938
                  STGA ++  +A+  I  + S +P+D      P + +M R +K      +  ++
Sbjct: 622 -------STGAKLTYGNALDYIANFVSAIPTDCDEPQHPTYEVMARGQK------FQAEV 668

Query: 939 QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            LP NAP   + G V +   LA+++    AC +L ++G F    LP
Sbjct: 669 MLPNNAPLRSVMGAVHAKKGLAKRSAAFNACIELLKLGYFDAYFLP 714



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 195/478 (40%), Gaps = 85/478 (17%)

Query: 1324 EGEEILDKTYYVFLPPEL-----------CF----IHPLPGSLVRGAQRLPSIMRRVESM 1368
            E E+IL +   +  PPEL           C     I  +P  +       P+I+ R ES 
Sbjct: 969  EAEKILTQRKNMLAPPELKEVRQDTKAFLCVQPLRISTIPPEVAAPLFIWPAIIYRFESH 1028

Query: 1369 LLAIQLKDKINYPVPASKILEALTAAS-------CQETFC--------YERAELLGDAYL 1413
            L++ +  + +         L A T  S        +E           YER E +GD +L
Sbjct: 1029 LISQEGCNVVGVDCGPEFALAAFTKDSDNSGEHEVEERVNFQRGMGENYERFEFIGDTFL 1088

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K   +   F+  P ++E +    R  M+ N  L+Q A+   L  YI++  F    W   G
Sbjct: 1089 KTATTLSTFILNPNENEFEFHVRRMLMLCNKNLFQTAMGLKLYEYIRSLPFNRRLWYPEG 1148

Query: 1474 VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSK 1533
            +  +       G+  +                 +++  D                 L  K
Sbjct: 1149 MKLLAGTGVVKGEEKVM----------------WHQPRD---------------HPLGEK 1177

Query: 1534 TLADVVEALIGVYYV-------------EGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
            T+ADV EALIG  ++             E    A   L+     ++++  +     ++PA
Sbjct: 1178 TIADVCEALIGAAFIAHDCPGDWKPEHWESAIRAVTKLVNNDDHKMQTWEDYKAAYAKPA 1237

Query: 1581 C-VPESVLRSVDFHALEDALKI----KFKDRGLLVEAITHASRP--SSGVSCYQRLEFVG 1633
              + E+     D   L D +++    +F+   LL  A  H S P     V  YQRLEF+G
Sbjct: 1238 YQMQEATAVQKD---LADKVELEHLYRFQYPRLLYSAFVHPSLPFMYEKVPNYQRLEFLG 1294

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DA+LD     +LF+ Y +  P  LT+ + A V+N+    + V    H HLRH  + L+ Q
Sbjct: 1295 DALLDMASISYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVNIGFHKHLRHHHAKLEHQ 1354

Query: 1694 IRDFVKEVLEELLKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            +R++  E+LE     G    +       PK L DI+ES  GA+F+DS  + + V + F
Sbjct: 1355 VREYAIELLEAKRVAGDSRDYWTTVSDPPKCLPDIIESYVGALFIDSDFNYAEVQRFF 1412


>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
 gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
            [Xenopus laevis]
          Length = 1795

 Score =  279 bits (714), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 225/766 (29%), Positives = 358/766 (46%), Gaps = 81/766 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   N I  L +G+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNIIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNAKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  T   VG Y        W   +W +EF T QVLVMT  I LN+L+  
Sbjct: 93   EKQVSQQVSAVRTHTDLKVGEYSDLQKTQCWAKGKWYQEFQTHQVLVMTCHIFLNVLKTG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A++ HPY  +M       S +  P + G+TAS +N  G     
Sbjct: 153  NVSLSNINLLVFDECHLAIQDHPYRDIMK---ICESCQTCPRILGLTASILN--GKCDPH 207

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            D   KI NLE  L S   T  D   L+++   P E+V++         L+++L      +
Sbjct: 208  DLEEKIQNLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYVDRSGLYQRLLN---EL 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            +EA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 265  DEALN---------FLTDCNISTHSKERDSTIISKQILSDCWAVLLV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGA-----VS 651
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      +     V+
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHFSPASLDMKFVT 364

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDS----HVVSGGEHVDVIIGAAVADGKVTPKVQ 707
             K  K+++    +      + E  E  ++    + VS  +  D                 
Sbjct: 365  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEDEEIEAKEKAET 424

Query: 708  SLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH----- 758
            S          T     IIFVER   A+VL ++  E     P L+++ S  + GH     
Sbjct: 425  SFPSPF-----TNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKN 479

Query: 759  ---NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
               N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+
Sbjct: 480  QPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYV 539

Query: 816  QSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS 874
            QS+GRAR P S+YI++ + G + +    L+  ++ E+ LR +  +  D  + +    +  
Sbjct: 540  QSKGRARAPISNYIMLADSGKIKAFEEDLKTYKSIEKILRNKCSKSMDCGNTESEPIVDD 599

Query: 875  VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEY 934
             +  P  V + +     V++N+A+G I+ YC++LPSD ++ L P+      E P GP  Y
Sbjct: 600  DEIFPPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDGP--Y 655

Query: 935  SCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
               L LP N+P    + GP  +  RLA++AV L  CKKLHE+G   D L+P    G++  
Sbjct: 656  HSTLYLPINSPLRAPIVGPPMNCARLAERAVALICCKKLHEIGELDDHLMP---VGKETV 712

Query: 994  KVDQNDEGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
            K ++  +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 713  KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQ 758



 Score =  114 bits (284), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 68/337 (20%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVLPV 1477
            FL+Y Q+H         + + ++++   A  K     IQ   FAP      W  P   P+
Sbjct: 1416 FLEYDQEH--------IKFIDSMLMGSGAFVKK----IQLSAFAPPDQNYEWRPPKKPPL 1463

Query: 1478 ----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDDDMEDG---ELEGDS 1524
                F  +  D D S        D  K+V ED       +N  E++   D     +  D 
Sbjct: 1464 ESAPFRSEFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENGGADAGKQSISYDL 1522

Query: 1525 SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD--------------- 1569
             + + ++ K++AD VEAL+G Y    G+ AA   +  + ++V  +               
Sbjct: 1523 HTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLDLKVLPEVRKPVTNTSTRGNYS 1582

Query: 1570 -----PEEVGCPS--------RPACV---PESVLRSVD-----FHALEDALKIKFKDRGL 1608
                   E+ C           P C+   PE+  +++D     F   E  +  +FK++  
Sbjct: 1583 LDGRTNSELSCKGIEYGYLKIPPRCMFEHPEAE-KTLDHLISGFENFEKKINYQFKNKAY 1641

Query: 1609 LVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN
Sbjct: 1642 LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN 1701

Query: 1668 ENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
              FA +AVK+  H + +  S  L   I DFV+  LE+
Sbjct: 1702 TIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEK 1738



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 936  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYDLDLTNLNQPLLDVDYTSSR 988

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E ++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 989  LNLLTPRHLNQKGKALPLSSAERRKAKWESLQNKQILV---PELCAIHPVPASLWRKAVC 1045

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1046 LPSILYRLHCLLTAEELR 1063



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+ GD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVSNCNL 1333

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KG  S +    F  P  W  PG +   D+++   +S+    E  +A  K+  D 
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETSGESVMANGKIDEDF 1393

Query: 1506 NY---------NEYEDDDMEDGELEGDSSSYRVLSS 1532
            +          N  E+ D +D  LE D    + + S
Sbjct: 1394 DDEEDEDLMWRNPKEETDFDDDFLEYDQEHIKFIDS 1429



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 16/132 (12%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALT 1392
            Y+ +PP   F HP         + L  ++   E+       + KINY     + +L+A T
Sbjct: 1600 YLKIPPRCMFEHP------EAEKTLDHLISGFEN------FEKKINYQFKNKAYLLQAFT 1647

Query: 1393 AASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    
Sbjct: 1648 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1707

Query: 1450 ALSKGLQSYIQA 1461
            A+      Y +A
Sbjct: 1708 AVKYDYHKYFKA 1719



 Score = 48.1 bits (113), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE  GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1272 GLILQALT-LSNASDGFN-LERLEMPGDSFLKHAITTYLFCTYPDSHEGRLSYMRSKKVS 1329

Query: 1667 NENFARVAVK 1676
            N N  R+  K
Sbjct: 1330 NCNLYRLGKK 1339


>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
          Length = 1534

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 214/690 (31%), Positives = 323/690 (46%), Gaps = 97/690 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +     ND        ++ FLV  
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLLLRHVLQNELNDRANGKPHRVSFFLVDS 183

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      V H+ G MG D WD Q W+       V+V TA+IL   L +S
Sbjct: 184 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQCLLNS 243

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            ++M  INLLI DE HH  K HPY+ ++ + Y   S  +RP +FGMTASP++ KG     
Sbjct: 244 HVRMNQINLLIFDEAHHTKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTKG----- 298

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LE+ LDS + T      L + V  P E V  YD+                  
Sbjct: 299 DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAYDR------------------ 340

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
               +S  + +  + M  R    K     + GV                R   YA  ELG
Sbjct: 341 ---LESPFKTNLHKLMENRFGNVK----ALEGV---------------FRFAWYASSELG 378

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
           +WC+    +++L AL +D            E +++K        L E   +  +  +   
Sbjct: 379 RWCS---DRAWLYALADDVLPKL-------EGHVNK--------LAESTAAATERDMAFK 420

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHT 719
           E   ++  +N      ++ +H  +  E            G+++PKV+ L   L K + H 
Sbjct: 421 EITLIKEASN------IVKAHTFNDPEF----------PGELSPKVRLLQTELSKHFSHA 464

Query: 720 EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ---EMRTFQMQ-ETIAK 775
            + + IIF ++   A  L ++F  L S+  ++   LIG  +        TF+ Q   + K
Sbjct: 465 PETKCIIFTQKRYTAKTLHELFTIL-SIPHLRPGVLIGVRSGDIGGMNITFRQQFLALVK 523

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G +  L ATSVAEEGLDI  CN+V+RFDL  T++ Y+QSRGRAR   S Y  M+E+ 
Sbjct: 524 FRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRGRARHYHSTYASMVEKD 583

Query: 836 NLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-TVYQVESTGAVV 892
           N  H   LR  R +E+T++   E +    + H  D      +    G   + V+STGA +
Sbjct: 584 NSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHDLDSLLQHEEGRRTFTVKSTGARL 643

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           + +SA+ ++  Y S L  ++ +  +  ++++      G T Y C++ LP  +P   L G 
Sbjct: 644 TYHSAIAILARYASSLQYEKETTPQATYVVQS----VGNT-YVCEVILPEKSPIRGLTGS 698

Query: 953 VCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
                 +A+Q+     C  L       D  
Sbjct: 699 PAIRKSIAKQSAAFDTCLLLRRHKLLDDFF 728



 Score =  142 bits (359), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 241/576 (41%), Gaps = 93/576 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL      +EE++ + E         F+  E   I  +P S+    
Sbjct: 976  QPVLQAELVRLRRNLLDKL--TTEEKKIQTE--------CFICAEPLKISAIPPSIASTC 1025

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L++I+  D+++  + +   LEA+T  S         Q  F       
Sbjct: 1026 LAFPAIITRLDSYLISIEACDELDLVIRSDYALEAVTKDSDNTEEHRGQQIHFQRGMGKN 1085

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A  + +  YI++
Sbjct: 1086 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNTAKKRQIYRYIRS 1145

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +     KD    +  Q K                           
Sbjct: 1146 RSFSRHVWYPDGLTLL---QGKDHSKKMLSQAK--------------------------- 1175

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVG------ 1574
                    L  KT+ADV EALIG   + GG +    + +K + + V+S    V       
Sbjct: 1176 ------HALGEKTIADVCEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYI 1229

Query: 1575 ----CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQ 1627
                 P+      E    ++    +E+ L   F+   LL  A+TH S PS+    V CYQ
Sbjct: 1230 GLYKPPNYQVRKAEGAETNLALQ-VEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVPCYQ 1288

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD++LD +  + LF  + +  P  LT+ + A V+N+    +AVK   H H++  S
Sbjct: 1289 RLEFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFS 1348

Query: 1688 SALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
            + L  QI  +V+E+   E    G   + +     PK L D+VE+  GAIF+DS     V+
Sbjct: 1349 NPLQAQITYYVEEIETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVI 1408

Query: 1747 WQVFQPLLDP----MVTPETLP-MHPVRELQER----------CQQQAEGLEYKASRSGN 1791
               FQ  + P    M   +T    HP   L  R          C +  E        +G 
Sbjct: 1409 EAFFQAQIKPYFQDMSIYDTFANKHPTTFLHNRLANEFGCTNYCLKAGEMPAIDGMPAGV 1468

Query: 1792 LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            LA V V+   V    A +   + A+  A+  AL VL
Sbjct: 1469 LAAVIVHNSVVSEATASS--SRYAKIRASERALVVL 1502


>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
          Length = 1922

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDIFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 225/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRP--- 1579
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1580 ----------------------------ACV---PESVLRSVD-----------FHALED 1597
                                         C+   P  +    D           F   E 
Sbjct: 1612 HQQKNLSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNYLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q  
Sbjct: 1669 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1728

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 1729 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1760


>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
            boliviensis]
 gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
            boliviensis]
          Length = 1922

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNGSWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPAEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDIFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
 gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
          Length = 1829

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEALN---------FINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 159/356 (44%), Gaps = 75/356 (21%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS 1712
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE+    G +S
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDS 1787



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
 gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
 gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
 gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
            RNase motif; Short=Helicase MOI
 gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
 gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
 gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
 gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
          Length = 1922

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
 gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
          Length = 1922

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla gorilla]
 gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla gorilla]
 gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla gorilla]
          Length = 1922

 Score =  278 bits (711), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 NQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
            [Oreochromis niloticus]
          Length = 1917

 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 223/755 (29%), Positives = 362/755 (47%), Gaps = 79/755 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ--RQNKKMLAVFLVPKVP 362
            R YQ+++LE A ++NTI  L TG+GKT IAVLL + + + ++   Q      VFLV    
Sbjct: 46   RKYQVELLEAALERNTIVCLNTGSGKTFIAVLLTKELSHQIRGPYQENAKRTVFLVNTAS 105

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             V QQA  +R  +   VG Y        W  QRW RE    QVLVMT  I L++L++ I+
Sbjct: 106  SVVQQAAAVRTHSDLSVGEYTDLEETLAWTDQRWSREIIENQVLVMTCHIFLHVLKNKIL 165

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             +  INL++ D+CH A+  HPY  +M  F   +     P + G+TAS +N K   S+++ 
Sbjct: 166  PLSKINLVVFDDCHLAITDHPYCQIMKLFEGCSCT---PRILGLTASILNGKCDPSELE- 221

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              KI NLE  L S   T  D   L+++   P EVV++         L  +L   +  + E
Sbjct: 222  -QKIQNLERILKSNAETATDLVVLDRYASQPREVVLDCGSYVDKSGLSSRL---QAELNE 277

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            A           F+   +    +E R    +S++  +D         RA+   L  LG W
Sbjct: 278  A---------LHFLNDCNISVVKEDRDPTFISKQVLND--------CRAV---LQVLGPW 317

Query: 603  CAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGA-----VSKK 653
            CA K A   +  LQ    +++    +  + F ++ L KV +L +            V+ K
Sbjct: 318  CADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPACLDLKFVTPK 377

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDS----HVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
              ++++  + +      + E  E  ++    + VS  +  D      V + K  P+    
Sbjct: 378  VLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEV-EAKERPEAN-- 434

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH------- 758
                     T     IIFVER   A+VL ++  E     P L+++ S  + GH       
Sbjct: 435  ----FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQA 490

Query: 759  -NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
             N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS
Sbjct: 491  RNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQS 550

Query: 818  RGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            +GRAR P S+YI++ + G   +    L   +  E+ LR +  +  ++S  +    +   +
Sbjct: 551  KGRARAPVSNYIMLADTGRTKAFEEDLSTYKAIEKILRNKCSKSVEVSEFEVEQVMDDDN 610

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
             +P  V + E  G  V++N+A+G I+ YC++LPSD ++ L P+          G   +  
Sbjct: 611  ILPPYVLRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTVEM----GDGYFQS 666

Query: 937  KLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             L LP N+P    ++GPV +  RLA++AV L  C+KLH++G   D L+P    G++  K 
Sbjct: 667  TLYLPINSPLRVPVKGPVMNCARLAEKAVALVCCEKLHKIGELDDHLMP---VGKETVKY 723

Query: 996  DQNDEGEPL--------PGTARHREFYPEGVADIL 1022
            ++  +            PG+ + R+ YP+ + + L
Sbjct: 724  EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 758



 Score =  163 bits (413), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 179/360 (49%), Gaps = 51/360 (14%)

Query: 1519 ELEGDSSSY-----RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
            EL   S SY     + ++ K++AD VEAL+G Y    G+ AA   +  +G++V   P E 
Sbjct: 1556 ELGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVL--PLER 1613

Query: 1574 G------------------CPSRPACVPESVLRSVD-----------FHALEDALKIKFK 1604
            G                  C       P  +L   D           F   E  +   FK
Sbjct: 1614 GTLTGAVAQVHTHTQVADLCYGWLKIPPRCMLDHPDAERTLNHLISGFENFEKKINYTFK 1673

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1674 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1733

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +   +   
Sbjct: 1734 LVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK 1793

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DS      VWQV+ P++ P++      +P  PVREL 
Sbjct: 1794 EEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELL 1853

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1854 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1911



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLSNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 78.6 bits (192), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 1/117 (0%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1291 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1350

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            Y+    KGL S +    F  P  W  PG +   D+ + D  +S   +E+ +A  + G
Sbjct: 1351 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDRLNSEEAKEELLANGRSG 1407



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1289 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1346

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1347 NCNLYRLGKKKGL 1359



 Score = 48.9 bits (115), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q  
Sbjct: 1664 FEKKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1723

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 1724 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1755


>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
 gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
          Length = 1552

 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 217/703 (30%), Positives = 322/703 (45%), Gaps = 105/703 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +     ND        ++ FLV  
Sbjct: 124 REYQIELFERAKAQNTIAVLDTGSGKTLIAVLLLRHVLQNELNDRANGKPHRVSFFLVDS 183

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      V H+ G MG D WD Q W+       V+V TA+IL   L +S
Sbjct: 184 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDRQVWEEHLQQNMVIVCTAEILNQCLLNS 243

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            ++M  INLLI DE HH  K HPY+ ++ + Y   S  +RP +FGMTASP++ KG     
Sbjct: 244 HVRMNQINLLIFDEAHHTKKDHPYARIIRDSYFKASPPQRPRIFGMTASPIDTKG----- 298

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LE+ LDS + T      L + V  P E V  YD+                  
Sbjct: 299 DIIAAATRLETLLDSRIATTSKITLLRQVVSRPIEKVWAYDR------------------ 340

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
               +S  + +  + M  R    K     + GV                R   YA  ELG
Sbjct: 341 ---LESPFKTNLHKLMENRFGNVK----ALEGV---------------FRFAWYASSELG 378

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
           +WC+    +++L AL +D            E +++K        L E   +  +  +   
Sbjct: 379 RWCS---DRAWLYALADDVLPKL-------EGHVNK--------LAESTAAATERDMAFK 420

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHT 719
           E   ++  +N      ++ +H  +  E            G+++PKV+ L   L K + H 
Sbjct: 421 EITLIKEASN------IVKAHTFNDPEF----------PGELSPKVRLLQTELSKHFSHA 464

Query: 720 EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ---EMRTFQMQ-ETIAK 775
            + + IIF ++   A  L ++F  L S+  ++   LIG  +        TF+ Q   + K
Sbjct: 465 PETKCIIFTQKRYTAKTLHELFTIL-SIPHLRPGVLIGVRSGDIGGMNITFRQQFLALVK 523

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G +  L ATSVAEEGLDI  CN+V+RFDL  T++ Y+QSRGRAR   S Y  M+E+ 
Sbjct: 524 FRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYHTLIQYVQSRGRARHYHSTYASMVEKD 583

Query: 836 NLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-TVYQVESTGAVV 892
           N  H   LR  R +E+T++   E +    + H  D      +    G   + V+STGA +
Sbjct: 584 NSDHEARLREVREAEKTMQNFCETLPEDRILHGNDHDLDSLLQHEEGRRTFTVKSTGARL 643

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFI---MERHEKPGGP----------TEYSCKLQ 939
           + +SA+ ++  Y S L       L   +I    +++EK   P            Y C++ 
Sbjct: 644 TYHSAIAILARYASSLVRSSNHALMASYIDNTWKQYEKETTPQATYVVQSVGNTYVCEVI 703

Query: 940 LPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           LP  +P   L G       +A+Q+     C  L       D  
Sbjct: 704 LPEKSPIRGLTGSPAIRKSIAKQSAAFDTCLLLRRHKLLDDFF 746



 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 241/576 (41%), Gaps = 93/576 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL      +EE++ + E         F+  E   I  +P S+    
Sbjct: 994  QPVLQAELVRLRRNLLDKL--TTEEKKIQTE--------CFICAEPLKISAIPPSIASTC 1043

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L++I+  D+++  + +   LEA+T  S         Q  F       
Sbjct: 1044 LAFPAIITRLDSYLISIEACDELDLVIRSDYALEAVTKDSDNTEEHRGQQIHFQRGMGKN 1103

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A  + +  YI++
Sbjct: 1104 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNTAKKRQIYRYIRS 1163

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +     KD    +  Q K                           
Sbjct: 1164 RSFSRHVWYPDGLTLL---QGKDHSKKMLSQAK--------------------------- 1193

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVG------ 1574
                    L  KT+ADV EALIG   + GG +    + +K + + V+S    V       
Sbjct: 1194 ------HALGEKTIADVCEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYI 1247

Query: 1575 ----CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQ 1627
                 P+      E    ++    +E+ L   F+   LL  A+TH S PS+    V CYQ
Sbjct: 1248 GLYKPPNYQVRKAEGAETNLALQ-VEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVPCYQ 1306

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD++LD +  + LF  + +  P  LT+ + A V+N+    +AVK   H H++  S
Sbjct: 1307 RLEFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFS 1366

Query: 1688 SALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
            + L  QI  +V+E+   E    G   + +     PK L D+VE+  GAIF+DS     V+
Sbjct: 1367 NPLQAQITYYVEEIETAEAESEGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSDFSFEVI 1426

Query: 1747 WQVFQPLLDP----MVTPETLP-MHPVRELQER----------CQQQAEGLEYKASRSGN 1791
               FQ  + P    M   +T    HP   L  R          C +  E        +G 
Sbjct: 1427 EAFFQAQIKPYFQDMSIYDTFANKHPTTFLHNRLANEFGCTNYCLKAGEMPAIDGMPAGV 1486

Query: 1792 LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            LA V V+   V    A +   + A+  A+  AL VL
Sbjct: 1487 LAAVIVHNSVVSEATASS--SRYAKIRASERALVVL 1520


>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
 gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
 gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
 gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
          Length = 1922

 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 360/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D   +     +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEIDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
          Length = 1912

 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 153  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 210  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 265  EEALN---------FINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 364

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 365  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 424

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 425  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 484

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 485  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 544

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 545  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 604

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 605  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 660

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 661  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 717

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 718  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 751



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1432 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1483

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1484 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1541

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1542 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1601

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1602 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1661

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1662 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1721

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1722 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1781

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1782 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1841

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1842 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1899

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1900 RSLKANQ 1906



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1385



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1285 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1342

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1343 NCNLYRLGKKKGL 1355



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1634 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1681

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1682 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1741

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1742 YDYHKYFKA 1750


>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
 gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
 gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
          Length = 1922

 Score =  278 bits (710), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  176 bits (447), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 225/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRP--- 1579
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1580 --------ACVPESVLRSVD----------------------------------FHALED 1597
                    +C   SV  S                                    F   E 
Sbjct: 1612 SQQKNLSVSCAAPSVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 1596

 Score =  277 bits (709), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 216/688 (31%), Positives = 336/688 (48%), Gaps = 107/688 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNKKM---LAVFLVPK 360
           R YQL++ E+AK++NTIA L+TG+GKTLIA LL+R ++ N+L+ + K M   +A FLV K
Sbjct: 134 RDYQLELFERAKEQNTIAVLDTGSGKTLIAALLLRWTLQNELENRAKGMSRRVAFFLVDK 193

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRH 419
           V LV QQ  V+     Y +  +CGEM +D   D   W + F     +V TA IL   L H
Sbjct: 194 VALVLQQHAVLACNLDYPIDKFCGEMIEDVEEDKSFWDKTFAENMAIVCTADILYKCLAH 253

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
           S I+M+ INLL+ DE HHA K H Y+ ++ +FY    ++KRP + GMTASPV+     +Q
Sbjct: 254 SYIRMDEINLLVFDEAHHAKKNHTYARIIKDFYVDVEEDKRPRILGMTASPVD-----AQ 308

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVP-MPSEVVVEYDKAASLWS--LHEQLKQM 536
           VD  +    LE  L + + T  D   L+  +  + +E +VE+D+    W   L+++LK +
Sbjct: 309 VDPKVAAAELEGLLHAQIATAADPAALQYTLTRLKAEEIVEFDRRPDNWETPLNQRLKML 368

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                                    G  E   + +  +E                   A 
Sbjct: 369 ------------------------VGQYEVFHKPFAFTET------------------AC 386

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
            ELG WCA +  Q F                 F+E  L+++ +  + E++  +  ++D +
Sbjct: 387 AELGPWCADRYWQLF-----------------FREEDLARLEARCEMEILGVSAYRQDTR 429

Query: 657 VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
                    E  +   +  +L+ +H     +         ++   ++ KV  L+K+L K 
Sbjct: 430 ---------EQVSRVRQAYDLVKNHEFGRPK---------LSTDSLSSKVIELVKVLRKQ 471

Query: 717 --QHTEDFRAIIFV-ERVVAALVL-----PKVFAE-LPSLSFVKSASLIGHNNSQEMRTF 767
                +D R I+FV +R  A+L++     P++  E L S   V S     H ++ ++   
Sbjct: 472 FEDPDQDPRCIVFVKQRNTASLLVDLLQQPEMHIEGLKSGMLVGSGRADAHWDNTKVSFR 531

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
               TI KFR G +  + ATSVAEEGLDI  CNV+IR+DL +T++ YIQSRGRAR+ GS 
Sbjct: 532 NQVRTIIKFRKGVLNCIFATSVAEEGLDIPDCNVIIRYDLNETLIQYIQSRGRARRHGSI 591

Query: 828 YILMIERGNLSHATFLRNARNSEETLRK--EAI-ERTDLSHLKDTSRLISVDAVPGTVYQ 884
           YI M+ERGN  H   L   + +E+ LR+  EA+ E   L+             +    Y 
Sbjct: 592 YIHMVERGNPRHRRRLHENKANEDALRRFCEALPEDRKLTGNNFNMDYFLRKEMGQQQYI 651

Query: 885 VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNA 944
           V  TGA ++   A+ ++  + S LP    ++L PE+++     PGG   + C++ LP  +
Sbjct: 652 VPGTGAKLNYKQALVILANFVSSLPHPPETVLAPEYVI--CAVPGG---FQCEVMLPPQS 706

Query: 945 PFEKLEGPVCSSMRLAQQAVCLAACKKL 972
           P     G V     +A+ +     C KL
Sbjct: 707 PVRSATGKVHPRKAMAKCSAAFELCLKL 734



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 159/634 (25%), Positives = 249/634 (39%), Gaps = 122/634 (19%)

Query: 1235 LEGRIVTAAHSGKR-FYVESIRYEMTAESSFPRKEGYLGP------------LEYSSYAD 1281
             +G  V   + G R +++   R++M A  + P  EG + P            L YS    
Sbjct: 934  FKGHFVVDPYDGSRKYFLRGRRHDMKATDTVP--EGIVPPGHAWRGVSTRDILNYS--LT 989

Query: 1282 YYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPEL 1341
             +K+      +  +QP++    +   +NLL          +  GE+ L+     FL  E 
Sbjct: 990  KWKRSREKTTLNPQQPVVEAELMPLRRNLLD---------DNIGEDDLEPKQ-CFLVLEP 1039

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC----- 1396
              I PLP      A   P+I+ R+ES L+A+     +   +     LEALT  S      
Sbjct: 1040 LRISPLPAKTAMMAYSFPAIIHRIESNLIALDACRLVGLDIRPDLALEALTKDSDNTGEH 1099

Query: 1397 ---QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
               Q +F       YER E LGD +LK   +  +F   P K E +    R  ++ N  L+
Sbjct: 1100 DAEQISFQPGMGNNYERLEFLGDCFLKMATTIAIFTLIPDKEEFEYHVERMLLICNRNLF 1159

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
              AL   L+ YI++  F    W  P  L +     K G        K++   +       
Sbjct: 1160 NNALEFKLEEYIRSMAFNRHSWY-PNNLTL-----KSG--------KTIQPRRT------ 1199

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG---------KDAANHL 1558
                                 +L+ K++ADV EALIG   + G          + A +  
Sbjct: 1200 --------------------HLLADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLA 1239

Query: 1559 MKWIGIQVES---------DPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRGL 1608
            ++ +   V+S         +   +  P      P S  + VD  A     L   F+   L
Sbjct: 1240 IRAVSTLVKSPRHSMSSYSEYYSLYTPPAWQTAPCSSAQ-VDMAARFACRLGYTFRHPRL 1298

Query: 1609 LVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            L  A  H + PS    +  YQRLEF+GDA+LD  I + LF  +    P  LT+ + A V+
Sbjct: 1299 LRSAFQHPTYPSVYEHLPSYQRLEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVS 1358

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS-------------F 1713
            N+    +      H ++   S  + + +  +V E+ E LL    ++             F
Sbjct: 1359 NQFLGCLGFMLGFHKNIACCSPQVGKDLARYVAEMEEALLAAKEDAVRAGKTEDDWARDF 1418

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ----PLLDPMVTPETLP-MHPV 1768
             L   + PK L D+VE+  GA+F+DSG +   V    +    P  + M   +T    HPV
Sbjct: 1419 WLNCSRPPKCLPDVVEAYVGAVFVDSGYNFGEVRAFLERHIRPFFEDMRLYDTFANNHPV 1478

Query: 1769 RELQERCQQQAEGLEYKA-SRSGNLATVEVYIDG 1801
              L    Q Q    E++  +R      V V +DG
Sbjct: 1479 TMLVAVMQGQFRCQEWRVLARELPAGPVAVALDG 1512


>gi|50261841|gb|AAT72473.1| AT1G01040 [Arabidopsis lyrata subsp. petraea]
          Length = 179

 Score =  277 bits (709), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 138/184 (75%), Positives = 155/184 (84%), Gaps = 5/184 (2%)

Query: 1419 RFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVF 1478
            R+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVF
Sbjct: 1    RYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVF 60

Query: 1479 DEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADV 1538
            DEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADV
Sbjct: 61   DEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADV 115

Query: 1539 VEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDA 1598
            VEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF  LE A
Sbjct: 116  VEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDFVGLERA 175

Query: 1599 LKIK 1602
            LK +
Sbjct: 176  LKFE 179


>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
 gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
 gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
          Length = 1922

 Score =  277 bits (708), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 358/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     +       +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDDYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1442 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1611

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1612 SQQKNLSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
 gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
 gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
          Length = 1538

 Score =  276 bits (707), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 216/681 (31%), Positives = 326/681 (47%), Gaps = 105/681 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDL-QRQNKK--MLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +I N+L  R N K   ++ FLV  
Sbjct: 128 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDNRANGKPHRVSFFLVDS 187

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      V H+ G MG D WD + W        V+V TA+IL   L +S
Sbjct: 188 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDEHLQRNMVIVCTAEILNQCLLNS 247

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +KM+ INLLI DE HHA K HPY+ ++ + Y      +RP VFGMTASP++ KG     
Sbjct: 248 YVKMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG----- 302

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LE+ LDS + T      L + V  P E V  Y++  S ++            
Sbjct: 303 DITEAATRLETLLDSRIATTSKITLLREVVSRPIEKVWAYNRLESPFA------------ 350

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                       ++ M  R  G  + L  VY                  R   +A  ELG
Sbjct: 351 ---------TELYKLMDTR-YGNIKVLEGVY------------------RFAWHASSELG 382

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
           +WC+    +++  AL +D               L K         +EG +SK        
Sbjct: 383 KWCS---DRAWWHALADD--------------VLPK---------LEGNISK-------- 408

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVAD----GKVTPKVQSLIKILLK- 715
               VE  T   E G +    ++   E  + +   + AD    G+++PKVQ L   L K 
Sbjct: 409 ---LVESNTLNAEHGAVFKD-IIRIREASETVKNYSFADPELPGELSPKVQLLRMELSKH 464

Query: 716 YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ---EMRTFQMQ-E 771
           +  T   + I+F ++   A +L ++F  L ++  ++   LIG           TF+ Q  
Sbjct: 465 FSDTTGTKCIVFTQKRYTAKILNELFTVL-NIPHLRPGVLIGVRPGDIGGMNVTFRQQFL 523

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
            + KFR G +  L ATSVAEEGLDI  CN+V+RFDL +T++ Y+QSRGRAR   S Y +M
Sbjct: 524 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYRTLIQYVQSRGRARHCTSTYAIM 583

Query: 832 IERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-TVYQVEST 888
           +E+ N  H   L+  R +E+ +++  E +    + H  D      +    G   + V+ST
Sbjct: 584 VEKDNAEHEGRLKEIREAEKIMQRFCETLPEDRILHGNDHDLDSLLQEEEGRRTFTVKST 643

Query: 889 GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
           GA ++ +SA+ ++  Y S L  ++ ++ +  +++           Y C++ LP  +P   
Sbjct: 644 GAKLTYHSAIAILARYASSLQYEKETVPQVTYVVGH-----VSNAYVCEVILPEKSPIRG 698

Query: 949 LEGPVCSSMRLAQQAVCLAAC 969
           L G       +A+Q+     C
Sbjct: 699 LTGSPAIRKAVAKQSAAFDTC 719



 Score =  149 bits (376), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 243/574 (42%), Gaps = 89/574 (15%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL       +E + E           F+  E   I  +P S+V   
Sbjct: 980  QPVLQAELVRLRRNLLDKMTTQEKEMQTE----------CFICAEPLRISAIPTSIVSTC 1029

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L+A++  D++   +     LEA T  S         Q  F       
Sbjct: 1030 LAFPAIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKN 1089

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  L+ + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1090 YERLEFLGDCFLKMATSIALYTQNPDDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRS 1149

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +  +D           +K ++E K                     
Sbjct: 1150 RGFSRHIWYPDGLTLLHGKD---------HSKKLLSEGK--------------------- 1179

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEEVGC----- 1575
                    L  KT+ADV EALIG   + GG ++  +   K +   V+S    V C     
Sbjct: 1180 ------HALGEKTIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYI 1233

Query: 1576 --PSRPACVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQR 1628
               + P    E    S D  A  +E+ L   F    LL  AITH S PS+    V CYQR
Sbjct: 1234 TLYTMPKYQTEKPRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQR 1293

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  + LF  + +  P  LT+ + A V+N+    ++VK   H  +   S+
Sbjct: 1294 LEFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSN 1353

Query: 1689 ALDRQIRDFVKEVLEELLKP-GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
             L  QI  +V+E+     +  G   + +     PK L D+VE+  GAIF+DS  D  V+ 
Sbjct: 1354 PLQAQITHYVEEIESAQAESRGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIE 1413

Query: 1748 QVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------ 1796
              F+    P  + M   +T    HP   L  +   +     Y   ++G L T++      
Sbjct: 1414 VFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNY-CLKAGELPTIDGAPAGV 1472

Query: 1797 ---VYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
               V + G  +  A++   + A+  A+  ALAVL
Sbjct: 1473 LAAVIVHGNVISEARSSSSRYAKVKASEKALAVL 1506


>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
          Length = 1881

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 223/751 (29%), Positives = 358/751 (47%), Gaps = 71/751 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ+++LE A + NTI  L TG+GKT IAVLLI+ + + ++ +++K   VFLV     V
Sbjct: 35   RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGEDRKR-TVFLVNAASSV 93

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
             QQA  +R  +   VG Y  E     W  + W RE    QVLVMT  I L++L++ ++ +
Sbjct: 94   VQQASTVRTHSDLQVGDYMSE-EMTTWPEEIWNREMMGNQVLVMTCHIFLHVLKNGVLPL 152

Query: 425  EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
              INLL+ DECH A+  HPY  +M            P + G+TAS +N  G     D   
Sbjct: 153  SKINLLVFDECHLAITDHPYQEIMK---ICEGCPGCPRILGLTASILN--GKCDPCDLEE 207

Query: 485  KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAA 544
            KI NLE  L S   T  D   L+++   P EVV++      L+  H+Q    +  + E  
Sbjct: 208  KIQNLEKILQSNAETATDLVVLDRYASQPREVVLD----CGLY--HDQSGLSDRLLSELD 261

Query: 545  QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
            ++        F+   +     E R    +S++  +D  A            L  LG WCA
Sbjct: 262  EA------LHFLNDCNLSTHREDRDPTFISKQVLNDCRA-----------VLTVLGPWCA 304

Query: 605  YKVAQSFLTALQN-----DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--DAKV 657
             K A   +  LQ       E  N +  + F ++ L K+ +L +      ++  K    KV
Sbjct: 305  DKAAGIMVRELQKYIKHEQEELNRKF-LLFTDTILRKIHALCEEHFSPASLDLKFVTPKV 363

Query: 658  VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
            +   +   E    E ++ E ++ +     ++      +   D     + +   +      
Sbjct: 364  IRLLDILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKPEANFPSP 423

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQEMR 765
             T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   E+ 
Sbjct: 424  FTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQMEVE 483

Query: 766  TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
              + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR P 
Sbjct: 484  FRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPV 543

Query: 826  SDYILMIERGNLSHATF---LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV 882
            S+YI++ +       TF   L+  +  E+ LR +  +  + +  +        + +P  V
Sbjct: 544  SNYIMLADSERTK--TFEEDLKTYKAIEKILRNKCSKSAECNEFELEPVTDDDNVLPPYV 601

Query: 883  YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
             + E  G  V++N+A+G I+ YC++LPSD ++ L P+       K GG   Y   L LP 
Sbjct: 602  LRSEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK-CKTVELKTGG---YRSTLFLPI 657

Query: 943  NAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEG 1001
            N+P    + GP  +  RLA++AV L  C+KLH++G   D L+P    G++  K ++  + 
Sbjct: 658  NSPLRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMP---VGKETVKYEEELDL 714

Query: 1002 EPL--------PGTARHREFYPEGVADILQG 1024
                       PG+ + R+ YP+ + + L+G
Sbjct: 715  HDEEETSVPGRPGSTKRRQCYPKAIPECLRG 745



 Score =  168 bits (426), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/349 (34%), Positives = 182/349 (52%), Gaps = 34/349 (9%)

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE- 1572
            D+    +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V   PE+ 
Sbjct: 1530 DIGKQSITYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLP-PEKQ 1588

Query: 1573 ------------VGCPSRPACVPESVLRSVD-----FHALEDALKIKFKDRGLLVEAITH 1615
                        +  P R         R+++     F   E  +   FK++  L++A TH
Sbjct: 1589 SSGGSAELQYGWLKIPPRCMFDHPDAERTLNHLISGFENFEKKINYMFKNKAYLLQAFTH 1648

Query: 1616 ASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA 1674
            AS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +A
Sbjct: 1649 ASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLA 1708

Query: 1675 VKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKVLG 1725
            VK+  H + +  S  L   I DFV+  LE         EL +   +     D + PK +G
Sbjct: 1709 VKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMG 1768

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLE 1783
            DI ES+AGAI++DSG     VWQV+ P++ P++      +P  PVREL E   + A+   
Sbjct: 1769 DIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSP 1828

Query: 1784 YKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1829 AERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1875



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            Y+    KGL S +    F  P  W  PG   V ++D    D    D+ K +A  K
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSTTDKWDSDENKDLANGK 1409



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 930  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLSNVNQPLLDVDHTSSR 982

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 983  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1039

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 1040 LPSILYRLHCLLTAEELRSQ 1059



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            D+ K    + GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GR
Sbjct: 1285 DSPKTLGPNPGLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGR 1342

Query: 1657 LTDLRAAAVNNENFARVAVKHKL 1679
            L+ +R+  V+N N  R+  K  L
Sbjct: 1343 LSYMRSKKVSNCNLYRLGKKKGL 1365



 Score = 48.9 bits (115), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 18/133 (13%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQR-LPSIMRRVESMLLAIQLKDKINYPVP-ASKILEAL 1391
            ++ +PP   F HP        A+R L  ++   E+       + KINY     + +L+A 
Sbjct: 1600 WLKIPPRCMFDHP-------DAERTLNHLISGFEN------FEKKINYMFKNKAYLLQAF 1646

Query: 1392 TAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            T AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +   
Sbjct: 1647 THASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFAS 1706

Query: 1449 YALSKGLQSYIQA 1461
             A+      Y +A
Sbjct: 1707 LAVKYDYHKYFKA 1719


>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 1923

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 225/747 (30%), Positives = 356/747 (47%), Gaps = 69/747 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVA 1019
                        PG+ + R+ YP+ V+
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAVS 754



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1443 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1494

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1495 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1552

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1553 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1612

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1613 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1672

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1673 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1732

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1733 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1792

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1793 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1852

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1853 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1910

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1911 RSLKANQ 1917



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1396



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1752

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1753 YDYHKYFKA 1761


>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
 gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
          Length = 1915

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 228/760 (30%), Positives = 364/760 (47%), Gaps = 80/760 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCSVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLALSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNIAVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L KV +L +      A+  +   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKVHALCEGHFSPAALDLRFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   +     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLI-GH--------NNS 761
                T     IIFVER   A+VL ++  E     P L+++ S++ I GH        N  
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSSNFITGHGIGKNQPRNKQ 494

Query: 762  QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
             E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 495  MEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 554

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIE-----RTDLSHLKDTSRLISV 875
            R P S+Y+++ +   + S    L+  +  E+ LR +  +      TDL  + D       
Sbjct: 555  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVESGETDLEPVVDDD----- 609

Query: 876  DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
            D  P  V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS
Sbjct: 610  DIFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS 666

Query: 936  CKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEK 994
              L LP N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K
Sbjct: 667  -TLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVK 722

Query: 995  VDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
             ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 723  YEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 762



 Score =  174 bits (442), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 207/436 (47%), Gaps = 76/436 (17%)

Query: 1469 WAAPGVLPV----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DM 1515
            W  P   P+    F  D +D D S        D  K+V ED       +N  E++   D 
Sbjct: 1477 WKMPKKAPLGSMPFSADFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDT 1535

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDP 1570
                +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D 
Sbjct: 1536 GKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPAVKRTDR 1595

Query: 1571 EEVGCPSR--------------PA--------------CV---PESVLRSVD-------- 1591
             +  CP+R              PA              C+   P  +    D        
Sbjct: 1596 AQAACPARESFTSQQKTLSGGRPAAGSRSSGLKDLEYGCLKIPPRCMFDHPDADRTLSHL 1655

Query: 1592 ---FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFF 1647
               F   E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+ 
Sbjct: 1656 ISGFENFERKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYE 1715

Query: 1648 SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---- 1703
                  PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE    
Sbjct: 1716 DPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEM 1775

Query: 1704 -----ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
                 EL +   +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++
Sbjct: 1776 QGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLI 1835

Query: 1759 T--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMA 1815
                  +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A
Sbjct: 1836 EKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIA 1893

Query: 1816 QKLAARNALAVLKEKE 1831
            +  AAR AL  LK  +
Sbjct: 1894 KSAAARRALRSLKANQ 1909



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1393



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1293 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1350

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1351 NCNLYRLGKKKGL 1363



 Score = 48.9 bits (115), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1637 IPPRCMFDHP------DADRTLSHLISGFEN------FERKINYSFKNKAYLLQAFTHAS 1684

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1685 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1744

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1745 YDYHKYFKA 1753


>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
 gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
          Length = 698

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 52/517 (10%)

Query: 1333 YYVFLPPELCF--IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP------A 1384
            ++V LPPELC   I      +      LPS+M R+E++L+AI+LK+ ++   P      A
Sbjct: 3    HFVELPPELCSLKITGFSKDMGSSLSLLPSLMCRLENLLVAIELKNVMSSYFPEASQISA 62

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S ILEALT   C E    ER E+LGDA+LK+VV R  F+ Y    EGQLTR R  +VSN 
Sbjct: 63   SGILEALTTERCLERISLERLEVLGDAFLKYVVGRHNFISYEGLDEGQLTRRRSDIVSNS 122

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
             LY+ ++ + LQ YI+   F P+++ A G  P       D +++L    K++  D+    
Sbjct: 123  NLYELSIRRNLQVYIRDQHFEPTQFFALGR-PCKVVCNPDREATL--HPKNIDPDR---- 175

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
                       E+  L   + S+  L  KT+ADVVE+L+G + VE G  AA   ++WIGI
Sbjct: 176  ----------RENCNLRC-TKSHHWLHRKTIADVVESLLGAFLVECGFKAAFAFLRWIGI 224

Query: 1565 QVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS 1624
            +V+ +   +      +    S++  ++   LE+ +   FK +GLL++A  H S       
Sbjct: 225  KVDFENSALYRVLDASSTNLSLMNYMNISELEELIGYTFKHKGLLLQAFVHPSFNKHSGG 284

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR 1684
            CYQR+EF+GDAVLD+L+  +L+ +Y +L PG+LTDL++ A+NN +FA VAVK  +H +L 
Sbjct: 285  CYQRMEFLGDAVLDYLMASYLYSAYPDLKPGQLTDLKSLALNNNSFAYVAVKKSIHKYLI 344

Query: 1685 HGSSALDRQIRDFV---------KEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1735
              S +L   I  F          K++LEE   P            PKVLGDIVES  GA+
Sbjct: 345  KDSKSLTAAINKFQNYVNLSSSEKDLLEE---P----------TCPKVLGDIVESCVGAV 391

Query: 1736 FLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQA--EGLEYKASRSGNL- 1792
             LDSG + + VW++   LL P+++   + + P+REL+E CQ      GL      +G   
Sbjct: 392  LLDSGFNLNHVWKLMLMLLKPILSFCGMHIDPMRELREICQYNGFELGLPKPTEDNGEFH 451

Query: 1793 ATVEVYIDGVQVG-VAQNPQKKMAQKLAARNALAVLK 1828
              VEV IDG  +   A N   K A+K+AA+ AL  LK
Sbjct: 452  VKVEVNIDGKMISCTAANRNSKDARKVAAQEALLKLK 488


>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus familiaris]
          Length = 1923

 Score =  276 bits (705), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 223/754 (29%), Positives = 357/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+ +L    V +
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYGRLL---VEL 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  177 bits (450), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 228/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1443 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1494

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1495 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1552

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRP--- 1579
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP R    
Sbjct: 1553 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKRTDREKTMCPPRENFS 1612

Query: 1580 ---------------ACVPESVLRSVD---------------------------FHALED 1597
                           A +  SVL+ ++                           F   E 
Sbjct: 1613 SQQKNLSGGRAAASVASLRPSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1672

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1673 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1732

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1733 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1792

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1793 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 1852

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1853 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1910

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1911 RSLKANQ 1917



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 78.6 bits (192), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNAD 1396



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 48.9 bits (115), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1752

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1753 YDYHKYFKA 1761


>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
          Length = 1917

 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 219/755 (29%), Positives = 361/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLLI+     I  D +++ K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLIKELSYQIREDFKKKGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   ++  +   VG Y      + W  +RW +EF   QVLVMT Q+ LN+L++ 
Sbjct: 103  ASQVAQQVSTVKTHSDLKVGDYSSVEITEAWTKERWNQEFAKYQVLVMTCQMALNVLKNE 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLLI DECH A++ HPY  +M       S    P + G+TAS +N  G     
Sbjct: 163  HLALSNINLLIFDECHLAIQDHPYREIMK---LCESCPSCPRILGLTASILN--GKCDPA 217

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+    +    L+E+L  +++ A
Sbjct: 218  ELEEKIQKLEKILKSSAETATDLVVLDRYTSQPCEIVVDCGPYSDKSGLYERLLTELDDA 277

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            +              F+   +       R    +S++  SD  A L+            L
Sbjct: 278  L-------------SFLNDCNITVHCRERDSILISKQILSDCRAVLLV-----------L 313

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K  
Sbjct: 314  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFV 373

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 374  TPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKTETN 433

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 434  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 494  MEIEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+YI++ +   +      L+  +  E+ LR +  +  D+S  ++   +   D  P 
Sbjct: 554  RAPISNYIMLADSDKIKCFEEDLKTYKAIEKILRNKCSKSVDISETENEPIIDDDDIFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G I+ YC++LPSD ++ L P+       +      +   L L
Sbjct: 614  YVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKC----KTRELLDNTFYATLYL 669

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 670  PINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 726

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 225/490 (45%), Gaps = 95/490 (19%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVLPV 1477
            FL+Y Q+H         + + N+++   A  K     I    F+P+     W AP    +
Sbjct: 1437 FLEYDQEH--------IKFIDNMLMGSGAFVKK----ISLSPFSPADSNYEWKAPKKSSL 1484

Query: 1478 ----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDS 1524
                F  D  D D S        D  K+V ED       +N  E++   D     +  D 
Sbjct: 1485 TNVQFSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGIDAGKQSISYDL 1543

Query: 1525 SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR- 1578
             + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V     +++ + V C  R 
Sbjct: 1544 HTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWDNVLCSYRD 1603

Query: 1579 -------------------------------------PACV-----PESVLRSV--DFHA 1594
                                                 P C+      E+ L  +   F  
Sbjct: 1604 HFNNQQKHSSVNCISATLANQETSHYKDLVYGCLKIPPRCMFDHPDAETTLNHLISGFEN 1663

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       
Sbjct: 1664 FEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1723

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------E 1704
            PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  +E         E
Sbjct: 1724 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSE 1783

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
            L +   +     D + PK +GDI ES+AGAI++DS     +VWQV+ P++ P++      
Sbjct: 1784 LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSEMSLEMVWQVYYPMMRPLIEKFSAN 1843

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAAR 1821
            +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR
Sbjct: 1844 VPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAAR 1901

Query: 1822 NALAVLKEKE 1831
             AL  LK  +
Sbjct: 1902 RALRSLKANQ 1911



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 1054 LPSILYRLHCLLTAEELRSQ 1073



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1296 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1355

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1356 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNAD 1394



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1294 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1351

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1352 NCNLYRLGKKKGL 1364



 Score = 48.9 bits (115), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP           L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1639 IPPRCMFDHP------DAETTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1686

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1687 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1746

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1747 YDYHKYFKA 1755


>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
          Length = 1921

 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 360/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D+ R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDVSRLGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWSQEFAKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFMDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFVSDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D    +    +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETEIEPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 224/487 (45%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1441 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1492

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E+    D     +  D  + 
Sbjct: 1493 -FSADFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEESCGVDAGKQSISYDLHTE 1550

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E   CP+R    
Sbjct: 1551 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVVKRTDRETATCPTRESFG 1610

Query: 1579 -----------PACV-------------------PESVLRSVD-----------FHALED 1597
                        AC                    P  +    D           F   E 
Sbjct: 1611 SQQKSLSGGRAAACAASPRSPVFKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1670

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1671 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1730

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1731 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1790

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1791 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 1850

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1851 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1908

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1909 RSLKANQ 1915



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1396



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 48.5 bits (114), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1751 YDYHKYFKA 1759


>gi|297600250|ref|NP_001048796.2| Os03g0121800 [Oryza sativa Japonica Group]
 gi|255674167|dbj|BAF10710.2| Os03g0121800, partial [Oryza sativa Japonica Group]
          Length = 165

 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/156 (83%), Positives = 142/156 (91%), Gaps = 2/156 (1%)

Query: 1773 ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
            ERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+GVAQNPQKKMAQKLAARNAL VLKEKET
Sbjct: 1    ERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEKET 60

Query: 1833 AEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRV 1892
            A  KE  DE   ++KNG Q FTRQTLNDICLRR WPMP YRCV EGGPAHAKRF Y+VRV
Sbjct: 61   ATKKE--DERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRV 118

Query: 1893 NTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            NT+D+GWTDEC+GEPMPSVKKAKDSAAVLLLELLN+
Sbjct: 119  NTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNR 154


>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
          Length = 1920

 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 224/754 (29%), Positives = 360/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A  +NTI  L TG+GKT IAVLL +     I  +  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIRGEFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKEKWNQEFMKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILQSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADAGETDLEPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  170 bits (431), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1440 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGGMP 1491

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1492 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1549

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E  G  +R    
Sbjct: 1550 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRADRENAGRSARENSN 1609

Query: 1579 --------PACVPE------SVLRSVD---------------------------FHALED 1597
                       VP       SVL+ ++                           F   E 
Sbjct: 1610 SQQKNLSVSCAVPSGASARTSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1669

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1670 KINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1729

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1730 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1789

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1790 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLELVWQVYYPMMRPLIEKFSANVPR 1849

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1850 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1907

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1908 RSLKANQ 1914



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1293 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1352

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1353 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1391



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1291 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1348

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1349 NCNLYRLGKKKGL 1361



 Score = 49.3 bits (116), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1642 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1689

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1690 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1749

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1750 YDYHKYFKA 1758


>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
 gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
 gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
          Length = 1893

 Score =  275 bits (703), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 221/762 (29%), Positives = 357/762 (46%), Gaps = 74/762 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L +G+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  T   VG Y  +     W  +RW  EF+T QVLVMT  I LN+L+  
Sbjct: 93   EKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKSG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A++ HPY  +M       S +  P + G+TAS +N  G     
Sbjct: 153  NVSLSNINLLVFDECHLAIQDHPYREIMK---ICESCQPCPRILGLTASILN--GKCDPR 207

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            D   KI  LE  L S   T  D   L+++   P E+V++         L+++L      +
Sbjct: 208  DLEEKIQKLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYIDKSGLYQRLLN---EL 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            +EA           F+   +     + R    +S++  SD    L+            LG
Sbjct: 265  DEALN---------FLIDCNISTHSKERDSTLISKQILSDCQTVLLV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGA-----VS 651
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      +     V+
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHFSPASLDMKFVT 364

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             K  K+++    +      + E  E  ++   +   +V         D     + +   +
Sbjct: 365  PKVIKLLEILRKYKPYERQQFESVEWYNNR--NQDNYVSWSDSEDDDDEDEEIEEKEKTE 422

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------N 759
                   T     IIFVER   A+VL ++  E     P L+++ S  + GH        N
Sbjct: 423  TSFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRN 482

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+G
Sbjct: 483  KQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKG 542

Query: 820  RARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            RAR P S+YI++ +   + +    L+  +  E+ LR +  +  D  + +    +   +  
Sbjct: 543  RARAPISNYIMLADSDKIKAFEEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIF 602

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P G   Y   L
Sbjct: 603  PPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTREFPDG--LYRSTL 658

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    + GP  +  RLA +AV L  CKKLHE+G   D L+P    G++  K ++
Sbjct: 659  YLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMP---VGKETVKYEE 715

Query: 998  NDEGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
              +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 716  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQ 757



 Score =  164 bits (414), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 218/488 (44%), Gaps = 92/488 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVLPV 1477
            FL+Y Q+H         + + ++++   A  K     I    FAP      W AP   P+
Sbjct: 1416 FLEYDQEH--------IKFIDSMLMGSGAFVKK----IPLSSFAPPDQNYEWRAPKKPPL 1463

Query: 1478 ----FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDS 1524
                F  D  D D S        D  K+V ED       +N  E++   D     +  D 
Sbjct: 1464 ESSQFPCDFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGADAGKQSISYDL 1522

Query: 1525 SSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ-------------VESDPE 1571
             + + ++ K++AD VEAL+G Y    G+ AA   +  +G++             V S   
Sbjct: 1523 HTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPEVRKLVTNTNVISASS 1582

Query: 1572 EVGCPSRPACV-----------------------PESVLRSVD-----------FHALED 1597
                 +R  C                        P  +    D           F   E 
Sbjct: 1583 SYQNSTRDNCTLTARTNTDLSSCKGIDYGYLKIPPRCMFEHPDAEKTLDHLISGFENFEK 1642

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1643 KINYPFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1702

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1703 LTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRR 1762

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VW V+ P++ P++      +P 
Sbjct: 1763 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWHVYYPMMQPLIEKFSANVPR 1822

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1823 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1880

Query: 1825 AVLKEKET 1832
              LK  ++
Sbjct: 1881 RSLKANQS 1888



 Score = 80.5 bits (197), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 938  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 990

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 991  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPVPASLWRKAVC 1047

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1048 LPSILYRLHCLLTAEELR 1065



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1274 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1333

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KG  S +    F  P  W  PG +   D+++   +S+    E  +   K+  D 
Sbjct: 1334 YRLGKKKGSPSRMVVSIFDPPVNWLPPGYIVNQDKNSDKWESNETSGEDVMVNGKIDEDF 1393

Query: 1506 NY---------NEYEDDDMEDGELEGDSSSYRVLSS 1532
            +          N  E+ D +D  LE D    + + S
Sbjct: 1394 DDEEDEDLMWRNPKEETDFDDDFLEYDQEHIKFIDS 1429



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 16/132 (12%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALT 1392
            Y+ +PP   F HP         + L  ++   E+       + KINYP    + +L+A T
Sbjct: 1612 YLKIPPRCMFEHP------DAEKTLDHLISGFEN------FEKKINYPFKNKAYLLQAFT 1659

Query: 1393 AASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    
Sbjct: 1660 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1719

Query: 1450 ALSKGLQSYIQA 1461
            A+      Y +A
Sbjct: 1720 AVKYDYHKYFKA 1731



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1272 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1329

Query: 1667 NENFARVAVK 1676
            N N  R+  K
Sbjct: 1330 NCNLYRLGKK 1339


>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
          Length = 1922

 Score =  274 bits (701), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 227/760 (29%), Positives = 365/760 (48%), Gaps = 72/760 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   +     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV-PG 880
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D     DT  ++  D V P 
Sbjct: 555  APISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE-ADTEPVVDDDDVFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPED-GPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 668

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 669  PINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 725

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
            +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 726  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765



 Score =  178 bits (451), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 229/487 (47%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G LP
Sbjct: 1442 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFT 1611

Query: 1579 ----------------------------------PACV---PES--VLRSV--DFHALED 1597
                                              P C+   P++   LR +   F   E 
Sbjct: 1612 SQQKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 943  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 995

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 996  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1052

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1053 LPSILYRLHCLLTAEELR 1070



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1386



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP      R  + L S     E          KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP---DADRTLRHLISGFENFEK---------KINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
          Length = 1935

 Score =  274 bits (701), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 226/756 (29%), Positives = 359/756 (47%), Gaps = 73/756 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D     K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSPNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWNQEFTMHQVLIMTCSVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSS---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEALN---------FINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D       S +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDVDSVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTQELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV----- 995
             N+P    + GP  S +RLA++ V L  C+KLH++G   + L+P    G++  K      
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEELD 727

Query: 996  -----DQNDEGEPLPGTARHREFYPEGVADILQGEW 1026
                 + N  G   PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETNVPGR--PGSTKRRQCYPKAIPECLRDSY 761



 Score =  171 bits (432), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 228/489 (46%), Gaps = 93/489 (19%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK--GLQSYIQADRFAPSRWAAP-----GV 1474
            FL+Y Q+H         + + N+++   A  K   L  +  AD  +   W  P     G 
Sbjct: 1455 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTAD--SAYEWKMPKKSSLGS 1504

Query: 1475 LPVFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSS 1525
            +P F  D +D D S        D  K+V ED       +N  E++   D     +  D  
Sbjct: 1505 MP-FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLH 1562

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCP---- 1576
            + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +  E+  CP    
Sbjct: 1563 TEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGREKALCPALEN 1622

Query: 1577 -------------------SRPA--------CV---PESVLRSVD-----------FHAL 1595
                               SR +        C+   P  +    D           F   
Sbjct: 1623 FSSQQKSLSGSCASAVAAGSRSSAWKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENF 1682

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            E  +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       P
Sbjct: 1683 EKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSP 1742

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------EL 1705
            G LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL
Sbjct: 1743 GVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSEL 1802

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETL 1763
             +   +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +
Sbjct: 1803 RRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANV 1862

Query: 1764 PMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
            P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR 
Sbjct: 1863 PRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARR 1920

Query: 1823 ALAVLKEKE 1831
            AL  LK  +
Sbjct: 1921 ALRSLKANQ 1929



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.9 bits (115), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1657 IPPRCMFDHP------DADKTLTHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1704

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1705 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1764

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1765 YDYHKYFKA 1773


>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
 gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
 gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
          Length = 1923

 Score =  274 bits (700), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 226/760 (29%), Positives = 365/760 (48%), Gaps = 72/760 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   +     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV-PG 880
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D     DT  ++  D V P 
Sbjct: 555  APISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE-ADTEPVVDDDDVFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPED-GPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 668

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 669  PINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 725

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
            +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 726  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765



 Score =  177 bits (448), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 228/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G LP
Sbjct: 1443 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLP 1494

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1495 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1552

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1553 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFT 1612

Query: 1579 ----------------------------------PACV---PES--VLRSV--DFHALED 1597
                                              P C+   PE+   LR +   F   E 
Sbjct: 1613 SQQKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEK 1672

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1673 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1732

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1733 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1792

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1793 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1852

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   +  +    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1853 SPVRELLEMEPEITKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1910

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1911 RSLKANQ 1917



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 943  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 995

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 996  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1052

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1053 LPSILYRLHCLLTAEELR 1070



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRF-LFLKYPQKHEGQLTRMRQQMVSNLV 1445
            IL+ALT ++  + F  ER E+LGD++LK  ++   L       HEG+L+ MR + VSN  
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356

Query: 1446 LYQYALSKGLQSYIQADRFAP 1466
            LY+    KGL S +    F P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377



 Score = 49.3 bits (116), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------EADRTLRHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1752

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1753 YDYHKYFKA 1761


>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
          Length = 1922

 Score =  274 bits (700), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 226/760 (29%), Positives = 365/760 (48%), Gaps = 72/760 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   +     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV-PG 880
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D     DT  ++  D V P 
Sbjct: 555  APISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE-ADTEPVVDDDDVFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPED-GPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 668

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 669  PINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 725

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
            +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 726  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQ 765



 Score =  176 bits (447), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 228/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G LP
Sbjct: 1443 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLP 1494

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1495 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1552

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1553 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFT 1612

Query: 1579 ----------------------------------PACV---PES--VLRSV--DFHALED 1597
                                              P C+   PE+   LR +   F   E 
Sbjct: 1613 SQQKNLSGSRAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPEADRTLRHLISGFENFEK 1672

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1673 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1732

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1733 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1792

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1793 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1852

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   +  +    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1853 SPVRELLEMEPEITKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1910

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1911 RSLKANQ 1917



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 943  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 995

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 996  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1052

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1053 LPSILYRLHCLLTAEELR 1070



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRF-LFLKYPQKHEGQLTRMRQQMVSNLV 1445
            IL+ALT ++  + F  ER E+LGD++LK  ++   L       HEG+L+ MR + VSN  
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTVSLSALILDAHEGRLSYMRSKKVSNCN 1356

Query: 1446 LYQYALSKGLQSYIQADRFAP 1466
            LY+    KGL S +    F P
Sbjct: 1357 LYRLGKKKGLPSRMVVSIFDP 1377



 Score = 49.3 bits (116), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------EADRTLRHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1752

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1753 YDYHKYFKA 1761


>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
          Length = 1910

 Score =  273 bits (699), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 224/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  +    P + G+TAS +N K    ++
Sbjct: 153  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPAC---PRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 210  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 265  EEALN---------FINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 364

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 365  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 424

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 425  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 484

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 485  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 544

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 545  APISNYIMLADTDKMKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPY 604

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 605  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 660

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 661  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 717

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 718  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 751



 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1430 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1481

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1482 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1539

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1540 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1599

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1600 SQQKNLSVSCAAASMASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1659

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1660 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1719

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1720 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1779

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1780 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1839

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1840 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1897

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1898 RSLKANQ 1904



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1285 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1344

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1345 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1383



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1283 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1340

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1341 NCNLYRLGKKKGL 1353



 Score = 48.9 bits (115), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1632 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1679

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1680 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1739

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1740 YDYHKYFKA 1748


>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
          Length = 1921

 Score =  273 bits (699), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 223/759 (29%), Positives = 360/759 (47%), Gaps = 79/759 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  DL +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDLNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSSLEISASWTKEKWNQEFTQHQVLVMTCHVALNVLKND 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
             + +  INLL+ DECH A+  HPY  +M   E Y +      P + G+TAS +N  G   
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKICENYPSC-----PRILGLTASILN--GKCD 215

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHE-QLKQME 537
              +   KI  LE  L S   T  D   L+++   P E+VV+    A    L+E  LK+++
Sbjct: 216  PAELEEKIQKLEKILKSSAETATDLVVLDRYSSQPCEIVVDCGPYADKSGLYEILLKELD 275

Query: 538  VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
             A+              F+   +     + R    +S++  SD  A L+           
Sbjct: 276  EAL-------------NFLNDCNITVLSKERDSTLISKQILSDCRAVLVV---------- 312

Query: 598  ELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
             LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K
Sbjct: 313  -LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLK 371

Query: 654  --DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
                KV+       +    E ++ E ++ +     ++      +   D     + +   +
Sbjct: 372  FVTPKVIKLLEILRKYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPE 431

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------N 759
                   T     IIFVER   A+VL ++  E     P L+++ S  + GH        N
Sbjct: 432  TNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRN 491

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+G
Sbjct: 492  KQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 551

Query: 820  RARKPGSDYILMIERGNLSHATF---LRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            RAR P S+YI++ +   +   TF   L+  +  E+ LR +  +  D    +    +   D
Sbjct: 552  RARAPISNYIMLADSDKI--VTFEEDLKTYKAIEKILRNKCSKSVDPGETETEPVVDDDD 609

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
              P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P   T YS 
Sbjct: 610  IFPPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDS-TFYS- 665

Query: 937  KLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             L LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K 
Sbjct: 666  TLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKY 722

Query: 996  DQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 723  EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSY 761



 Score =  163 bits (413), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 222/486 (45%), Gaps = 87/486 (17%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P    +    
Sbjct: 1441 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSNYEWKMPKKAALGNVQ 1492

Query: 1478 FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYR 1528
            F  D  D D S        D  K+V ED       +N  E++   D     +  D  + +
Sbjct: 1493 FSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGIDTGKQSISYDLHTEQ 1551

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR----- 1578
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V     +++ E    PS      
Sbjct: 1552 CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWESTLSPSTQSFND 1611

Query: 1579 ----------PA----------------CV---PESVLRSVD-----------FHALEDA 1598
                      PA                C+   P  +    D           F   E  
Sbjct: 1612 QPRNLLTNYAPASTTNTQSSFYKDMEYGCLKIPPRCMFDHPDAEKTLIHLISGFENFERK 1671

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1672 INYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1731

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL + 
Sbjct: 1732 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRS 1791

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  
Sbjct: 1792 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRS 1851

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1852 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1909

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1910 SLKANQ 1915



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.4 bits (189), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNPD 1396



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DAEKTLIHLISGFEN------FERKINYNFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1751 YDYHKYFKA 1759


>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
          Length = 1923

 Score =  273 bits (699), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 219/755 (29%), Positives = 358/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  +  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQA  +R  +   VG Y        W  ++W +EF   QVLVMT Q+ LN+L++ 
Sbjct: 103  ANQVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQVALNVLKND 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N  G     
Sbjct: 163  YLSLSNINLLVFDECHLAILDHPYREIMKICEDCPSC---PRILGLTASILN--GKCDPA 217

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L K+++ A
Sbjct: 218  ELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDTSGLYERLLKELDEA 277

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            +              F+   +     + +    +S++  SD  A L+            L
Sbjct: 278  L-------------NFLNDCNISVHSKEKDSILISKQILSDCRAVLVV-----------L 313

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WC  KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K  
Sbjct: 314  GPWCTDKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFV 373

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 374  TPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETN 433

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNS 761
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH        N  
Sbjct: 434  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQ 493

Query: 762  QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
             E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 494  MEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPMEYRSYVQSKGRA 553

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+YI++ +   + S    L+  +  E+ LR +  +  D    +    +   D  P 
Sbjct: 554  RAPISNYIMLADSDKIKSFEDDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P G T YS  L L
Sbjct: 614  YVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDG-TFYS-TLYL 669

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  +  RLA++ V L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 670  PINSPLRAAIVGPQMNCARLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEEL 726

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSY 761



 Score =  170 bits (431), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 223/487 (45%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1443 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTNDSNYEWKMPKKSSLGNMP 1494

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D  D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1495 -FSSDIDDFDYSSWDAMCYLDPSKAVEEDDFVVGF-WNPSEENCGIDTGKQSISYDLHTE 1552

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      SD E    PS+    
Sbjct: 1553 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWETTLYPSKDNFN 1612

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      E  L  +   F   E 
Sbjct: 1613 SQQKNLSVNYASISVANLQSSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEK 1672

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1673 KINYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1732

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1733 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1792

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1793 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 1852

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1853 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1910

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1911 RSLKANQ 1917



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1300 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1359

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1360 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTD 1398



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1298 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1355

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1356 NCNLYRLGKKKGL 1368



 Score = 49.3 bits (116), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYNFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1752

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1753 YDYHKYFKA 1761


>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
 gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
 gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
 gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
 gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
 gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
          Length = 1920

 Score =  273 bits (698), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 224/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  +    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPAC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKMKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1440 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1491

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1492 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1549

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1550 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1609

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1610 SQQKNLSVSCAAASMASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1669

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1670 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1729

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1730 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1789

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1790 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1849

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1850 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1907

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1908 RSLKANQ 1914



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1393



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1293 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1350

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1351 NCNLYRLGKKKGL 1363



 Score = 48.9 bits (115), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1642 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1689

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1690 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1749

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1750 YDYHKYFKA 1758


>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
 gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
 gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
          Length = 1920

 Score =  273 bits (698), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 224/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  +    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPAC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKMKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1440 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1491

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1492 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1549

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1550 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1609

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1610 SQQKNLSVSCAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1669

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1670 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1729

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1730 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1789

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1790 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1849

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1850 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1907

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1908 RSLKANQ 1914



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1393



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1293 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1350

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1351 NCNLYRLGKKKGL 1363



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1642 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1689

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1690 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1749

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1750 YDYHKYFKA 1758


>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
            harrisii]
          Length = 1924

 Score =  273 bits (697), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 220/757 (29%), Positives = 359/757 (47%), Gaps = 75/757 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  +  R  K+   VFLV  
Sbjct: 46   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGNFNRNGKR--TVFLVNS 103

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQA  +R  +   VG Y        W  ++W +EF   QVLVMT Q+ LN+L++ 
Sbjct: 104  ANQVAQQASAVRTHSDLKVGEYSSLEISASWTKEKWNQEFIKHQVLVMTCQVALNVLKND 163

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
             + +  INLL+ DECH A+  HPY  +M   E Y +      P + G+TAS +N  G   
Sbjct: 164  YLSLSNINLLVFDECHLAILDHPYREIMKICEDYPSC-----PRILGLTASILN--GKCD 216

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQME 537
              +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L K+++
Sbjct: 217  PAELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDTSGLYERLLKELD 276

Query: 538  VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
             A+              F+   +     + +    +S++  SD  A L+           
Sbjct: 277  EAL-------------NFLNDCNISVHSKEKDSILISKQILSDCRAVLVV---------- 313

Query: 598  ELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
             LG WC  KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K
Sbjct: 314  -LGPWCTDKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLK 372

Query: 654  --DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
                KV+       +    E ++ E ++ +     ++      +   D     + +   +
Sbjct: 373  FVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPE 432

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------N 759
                   T     IIFVER   A+VL ++  E     P L+++ S  + GH        N
Sbjct: 433  TNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRN 492

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+G
Sbjct: 493  KQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKG 552

Query: 820  RARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            RAR P S+YI++ +   + S    L+  +  E+ LR +  +  D    +    +   D  
Sbjct: 553  RARAPISNYIMLADSDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETETEPIVDDDDIF 612

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E   G T YS  L
Sbjct: 613  PPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELSDG-TFYS-TL 668

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K ++
Sbjct: 669  YLPINSPLRAAIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEE 725

Query: 998  NDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
              +            PG+ + R+ YP+ + + L+  +
Sbjct: 726  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSY 762



 Score =  170 bits (431), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 223/487 (45%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1444 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTNDSNYEWKMPKKSSLGNIP 1495

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D  D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1496 -FSSDIDDFDYSSWDAMCYLDPSKAVEEDDFVVGF-WNPSEENCGIDTGKQSISYDLHTE 1553

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      SD E    PS+    
Sbjct: 1554 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRSDWENTLYPSKDNFN 1613

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      E  L  +   F   E 
Sbjct: 1614 SQQKNLSVNFASISVANLQSSLYKDLEYGCLKIPPRCMFDYPDAEKTLNHLISGFENFEK 1673

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1674 KINYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1733

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1734 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1793

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1794 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 1853

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1854 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1911

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1912 RSLKANQ 1918



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1301 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1360

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1361 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTD 1399



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1299 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1356

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1357 NCNLYRLGKKKGL 1369



 Score = 48.5 bits (114), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q  
Sbjct: 1671 FEKKINYNFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1730

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 1731 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1762


>gi|189441606|gb|AAI67373.1| dicer1 protein [Xenopus (Silurana) tropicalis]
          Length = 811

 Score =  273 bits (697), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 221/762 (29%), Positives = 357/762 (46%), Gaps = 74/762 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L +G+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNSGSGKTFIAVLLSKELSYQIRGDFSKNTKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  T   VG Y  +     W  +RW  EF+T QVLVMT  I LN+L+  
Sbjct: 93   EKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTCHIFLNVLKSG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A++ HPY  +M       S +  P + G+TAS +N  G     
Sbjct: 153  NVSLSNINLLVFDECHLAIQDHPYREIMK---ICESCQPCPRILGLTASILN--GKCDPR 207

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            D   KI  LE  L S   T  D   L+++   P E+V++         L+++L      +
Sbjct: 208  DLEEKIQKLEEILRSNAETATDLVVLDRYASQPCEIVLDCGPYIDKSGLYQRLLN---EL 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            +EA           F+   +     + R    +S++  SD    L+            LG
Sbjct: 265  DEA---------LNFLIDCNISTHSKERDSTLISKQILSDCQTVLLV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGA-----VS 651
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      +     V+
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTILRKIHALCEEHFSPASLDMKFVT 364

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             K  K+++    +      + E  E  ++   +   +V         D     + +   +
Sbjct: 365  PKVIKLLEILRKYKPYERQQFESVEWYNNR--NQDNYVSWSDSEDDDDEDEEIEEKEKTE 422

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------N 759
                   T     IIFVER   A+VL ++  E     P L+++ S  + GH        N
Sbjct: 423  TSFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRN 482

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+G
Sbjct: 483  KQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKG 542

Query: 820  RARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            RAR P S+YI++ +   + +    L+  +  E+ LR +  +  D  + +    +   +  
Sbjct: 543  RARAPISNYIMLADSDKIKAFEEDLKTYKAIEKILRNKCSKSIDCGNTESEPIVDDDEIF 602

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P G   Y   L
Sbjct: 603  PPYVLRQDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTREFPDG--LYRSTL 658

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    + GP  +  RLA +AV L  CKKLHE+G   D L+P    G++  K ++
Sbjct: 659  YLPINSPLRAPIVGPPMNCGRLADRAVALICCKKLHEIGELDDHLMP---VGKETVKYEE 715

Query: 998  NDEGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
              +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 716  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPGQ 757


>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
 gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
          Length = 1865

 Score =  273 bits (697), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 224/753 (29%), Positives = 357/753 (47%), Gaps = 75/753 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ+++LE A + NTI  L TG+GKT IAVLLI+ + + ++ +N K   VFLV     V
Sbjct: 35   RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKR-TVFLVNAASSV 93

Query: 365  YQQAEVIREQTGYVVGHYCGEMGQDF--WDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQA  +R  +   VG Y   M +D   W  + W RE    QVLVMT  I L++L++ ++
Sbjct: 94   AQQASTVRTHSDLQVGDY---MSEDMTSWPEEMWNREMIENQVLVMTCHIFLHVLKNGVL 150

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N  G     D 
Sbjct: 151  PLSKINLLVFDECHLAITGHPYREIMKICEGCPSC---PRILGLTASILN--GKCDPCDL 205

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              KI NLE  L S   T  D   L+++   P E V++  +      L E+L      ++E
Sbjct: 206  EEKIQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQSGLSERLLN---ELDE 262

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            A           F+   +     E R    +S++  +D         RA+   L  LG W
Sbjct: 263  ALN---------FLNDCNLSVHREDRDPTFISKQVLND--------CRAV---LTVLGPW 302

Query: 603  CAYKVAQSFLTALQN-----DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--DA 655
            CA K A   +  LQ       E  N +  + F ++ L K+ +L +      ++  K    
Sbjct: 303  CADKAAGIMVRELQKYIKHEQEELNRKF-LLFTDTILRKIHALCEEHFSPASLDLKFVTP 361

Query: 656  KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            KV+       E    E ++ E ++ +     ++      +   D     + +   +    
Sbjct: 362  KVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKTEANFP 421

Query: 716  YQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQE 763
               T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   E
Sbjct: 422  SPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQME 481

Query: 764  MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            +   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR 
Sbjct: 482  VEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARA 541

Query: 824  PGSDYILMIERGNLSHATF---LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            P S+YI++ +       TF   L+  +  E+ LR +  +  + +  +        + +P 
Sbjct: 542  PVSNYIMLADSERTK--TFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVLPP 599

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G ++ YC++LPSD ++ L P+         G    Y   L L
Sbjct: 600  YVLRSEDGGPRVTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGG----YRSTLFL 655

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GPV +  RLA++AV L  C+KLH++G   D L+P    G++  K ++  
Sbjct: 656  PINSPLRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMP---VGKETVKYEEEL 712

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQG 1024
            +            PG+ + R+  P+ + + L+G
Sbjct: 713  DLHDEEETSVPGRPGSTKRRQCSPKAIPECLRG 745



 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 32/348 (9%)

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
            D+    +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V    ++ 
Sbjct: 1514 DIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQS 1573

Query: 1574 GCPSR----------PACVPE--SVLRSVD-----FHALEDALKIKFKDRGLLVEAITHA 1616
               S           P C+ E     R+++     F   E  +   FK++  L++A THA
Sbjct: 1574 SGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHA 1633

Query: 1617 SRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
            S   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +AV
Sbjct: 1634 SYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAV 1693

Query: 1676 KHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKVLGD 1726
            K+  H + +  S  L   I DFV+  LE         EL +   +     D + PK +GD
Sbjct: 1694 KYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGD 1753

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEY 1784
            I ES+AGAI++DSG     VWQV+ P++ P++      +P  PVREL E   + A+    
Sbjct: 1754 IFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPA 1813

Query: 1785 KASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1814 ERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1859



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1279 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1338

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            Y+    KGL S +    F  P  W  PG   V ++D    D    D+ K +A  K
Sbjct: 1339 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSSTDKWDSDENKDLANGK 1391



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 930  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLSNVNQPLLDVDHTSSR 982

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 983  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1039

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 1040 LPSILYRLHCLLTAEELRSQ 1059



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            D+ K    + GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GR
Sbjct: 1267 DSPKTLGPNPGLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGR 1324

Query: 1657 LTDLRAAAVNNENFARVAVKHKL 1679
            L+ +R+  V+N N  R+  K  L
Sbjct: 1325 LSYMRSKKVSNCNLYRLGKKKGL 1347



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 16/132 (12%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALT 1392
            ++ +PP   F HP        A+R  ++   +   L     + KINY     + +L+A T
Sbjct: 1584 WLKIPPRCMFEHP-------DAER--TLNHLISGFL---NFESKINYTFKNKAYLLQAFT 1631

Query: 1393 AASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    
Sbjct: 1632 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1691

Query: 1450 ALSKGLQSYIQA 1461
            A+      Y +A
Sbjct: 1692 AVKYDYHKYFKA 1703


>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
          Length = 1921

 Score =  273 bits (697), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 221/759 (29%), Positives = 360/759 (47%), Gaps = 79/759 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y      + W  ++W +EF   QVLVMT  + L +LR+ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNE 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
             + +  INLL+ DECH A++ HPY  +M   E Y +      P + G+TAS +N  G   
Sbjct: 163  YLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSC-----PRILGLTASILN--GKCD 215

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSLHEQLKQ 535
              +   KI  LE  L S   T  D   L+++   P E+VV+   Y   + L+     LK+
Sbjct: 216  PAELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYG--RLLKE 273

Query: 536  MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
            ++ A+              F+   +     + R    +S++  SD  A L+         
Sbjct: 274  LDEAL-------------AFLNDCNISVLSKERDSTLISKQILSDCRAVLVV-------- 312

Query: 596  LGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++ 
Sbjct: 313  ---LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLD 369

Query: 652  KK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
             K    KV+       +    E ++ E ++ +     ++      +   D     + +  
Sbjct: 370  LKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEK 429

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH------- 758
             +       T     IIFVER   A+VL ++  E     P L+++ S  + GH       
Sbjct: 430  PETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQP 489

Query: 759  -NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
             N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS
Sbjct: 490  RNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQS 549

Query: 818  RGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            +GRAR P S+YI++ +   + S    L+  +  E+ LR +  +  D S  +    +   D
Sbjct: 550  KGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDASETETEPIVDDDD 609

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
              P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P   T YS 
Sbjct: 610  VFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTWELPDH-TFYS- 665

Query: 937  KLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             L LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K 
Sbjct: 666  TLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VGKETVKY 722

Query: 996  DQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 723  EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 223/480 (46%), Gaps = 75/480 (15%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDED 1481
            FL+Y Q+H   +  M   M S   + + +LS    +    +  AP + +   +    D D
Sbjct: 1441 FLEYDQEHIKFIDNML--MGSGAFVKKISLSHFSTTDSNYEWKAPKKSSMGNIQCSSDFD 1498

Query: 1482 TKDGDS----SLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSSKT 1534
              D  S       D  K+V ED       +N  E++   D     +  D  + + ++ K+
Sbjct: 1499 DFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDAGKQSISYDLHTEQCIADKS 1557

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPAC-------V 1582
            +AD VEAL+G Y    G+ AA   +  +G++V     ++D E   C +R  C        
Sbjct: 1558 IADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATRENCNSEQKNLS 1617

Query: 1583 PESVLRSV--------------------------------------DFHALEDALKIKFK 1604
            P SV  SV                                       F   E  +   FK
Sbjct: 1618 PNSVAASVVNSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFK 1677

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1678 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1737

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFV+  +E         EL +   +   
Sbjct: 1738 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEK 1797

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  PVREL 
Sbjct: 1798 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELL 1857

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1858 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1915



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 6/129 (4%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KGL S +    F  P  W  PG   + ++D  + D   +++++   E+ L   K
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTDK--WEKDEMTKENILANGK 1413

Query: 1506 NYNEYEDDD 1514
              ++Y DD+
Sbjct: 1414 -LDDYNDDE 1421



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 64/230 (27%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D                             ++  
Sbjct: 1751 YDYHKYFKA--------VSPELFHVID-----------------------------DFVQ 1773

Query: 1513 DDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
              ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1774 FQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1823



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366


>gi|302766077|ref|XP_002966459.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
 gi|300165879|gb|EFJ32486.1| hypothetical protein SELMODRAFT_407400 [Selaginella moellendorffii]
          Length = 497

 Score =  273 bits (697), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 208/599 (34%), Positives = 286/599 (47%), Gaps = 113/599 (18%)

Query: 319 NTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV 378
           NTI  LETG GKT+IAVLLIRS+ + L R+ +K + VFL P V L  QQAEVI   T   
Sbjct: 2   NTIVCLETGCGKTMIAVLLIRSL-SHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLY 60

Query: 379 VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHA 438
           VG Y G  G    D   W      ++V VMT  ILL+ LRH     + + LLI DECHH 
Sbjct: 61  VGTYVG--GTSTMDVHWWTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHC 118

Query: 439 VKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG--------VSSQVDCAIKICNLE 490
            K HPY+ +MSEFYH   + K P + GMTASP+  KG             DC      LE
Sbjct: 119 AKGHPYANIMSEFYHK-PEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDC------LE 171

Query: 491 SKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRR 550
           + L S + T  D +EL   +P     + EY                    +   +  +  
Sbjct: 172 TMLRSKIITFAD-EELTSFLPSSDMKIKEY------------------LPDTKGKHRTTD 212

Query: 551 SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQS 610
              +F         E L + +G+ E  +   A N I     +NY L ELG + A K A+ 
Sbjct: 213 IDNRF---------ENLTREFGLPEERQ---AVNKIYN--TLNYCLFELGLFSARKAAEI 258

Query: 611 FLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTN 670
            L                                         D K  D+E  F+    N
Sbjct: 259 MLAGC--------------------------------------DGKGRDAEAAFLRRVLN 280

Query: 671 EIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVER 730
            +EE  +LD      G   D I         ++ KVQ L+ +L +Y+  +D R I+FVER
Sbjct: 281 ILEEKAILD------GTADDQIRA-------ISSKVQLLLDVLDEYKSAQDLRCIVFVER 327

Query: 731 VVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE-TIAKFRDGRVTLLVATSV 789
           V+AA VL  +    P   +V++  +  H N  +  T   Q  ++  FR G+  ++VAT+V
Sbjct: 328 VIAAKVLTLLLNSRP---YVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVATNV 384

Query: 790 AEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNS 849
           AEEGLDI+ C++VIRF++ KT  + IQSRGRARK GSDY++++E GNL+    L      
Sbjct: 385 AEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGNLNEEKLL------ 438

Query: 850 EETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL 908
              L  E +    L  ++DT     +  +    Y VESTGAVV+++S+V L+H YCS L
Sbjct: 439 HAILEGEKLMHGQLHSVQDTYEH-QLFYLQKDAYHVESTGAVVNIDSSVSLLHQYCSTL 496


>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
          Length = 1890

 Score =  272 bits (696), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 221/762 (29%), Positives = 359/762 (47%), Gaps = 85/762 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ--RQNKKMLAVFLVPKVP 362
            R YQ+++LE A + NTI  L TG+GKT IAVLL + + + ++   Q      VFL     
Sbjct: 35   RKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLTKELSHQIRGSYQENARRTVFLANATS 94

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
               QQA  +R  +   VG Y        W  QRW RE    QVLVMT  + L++L + I+
Sbjct: 95   SAVQQAAAVRTHSDLHVGEYSDPQEATTWSRQRWSREIADNQVLVMTCHVFLHVLTNHIL 154

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             +  INL++ D+CH A+ +HPY  VM  F   T   +   + G+TAS +N K   S+++ 
Sbjct: 155  PLSKINLVVFDDCHLAITEHPYCEVMKLFEEHTCGSR---ILGLTASILNGKCDPSELE- 210

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSLHEQLKQMEVA 539
              KI NLE  L S   T  D   L+++   P EVV++   Y   + L S      +++  
Sbjct: 211  -QKIQNLERILKSSAETATDLVVLDRYACQPREVVLDCGPYMDKSGLSS------RLQAE 263

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            +EEA           F+   +  A  E R    +S++  SD  A            L  L
Sbjct: 264  LEEA---------LLFLNDCNISASREDRDPTFISKQILSDCLA-----------VLQVL 303

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGA-----V 650
            G WCA K A   +  LQ    +++    +  + F ++ L KV +L +      +     V
Sbjct: 304  GPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPASLDLKFV 363

Query: 651  SKKDAKVVDSENGFVEGGTNEIEEGELLDS----HVVSGGEHVDVIIGAAVADGKVTPKV 706
            + K  ++++  + +      + E  E  ++    + VS  +  D      V + K  P+ 
Sbjct: 364  TPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEV-EAKERPET 422

Query: 707  QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH---- 758
                        T     IIFVER   A+VL ++  E     P L+++ S  + GH    
Sbjct: 423  N------FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGK 476

Query: 759  ----NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y
Sbjct: 477  NQARNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSY 536

Query: 815  IQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
            +QS+GRAR P S+YI++ +     +    L   +  E+ LR +  +  ++        + 
Sbjct: 537  VQSKGRARAPVSNYIMLADSERTQAFQEDLTTYKAIEKILRNKCSKSVEVGEFDGEQVVD 596

Query: 874  SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
              + +P  V + E  G  V++N+A+G I+ YC++LPSD ++ L P+          G   
Sbjct: 597  DDNILPPYVLRSEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPKCKTVE----TGNGR 652

Query: 934  YSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
            +   L LP N+P    ++GP     RLA++AV L  C+KLH++G   D L+P    G++ 
Sbjct: 653  FQSTLYLPINSPLRVPIKGPTMHCARLAEKAVALLCCEKLHKIGELDDHLMP---VGKET 709

Query: 993  EKVDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
             K ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 710  VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 751



 Score =  170 bits (430), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/351 (34%), Positives = 179/351 (50%), Gaps = 47/351 (13%)

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACV 1582
            D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V   P E G  SR +  
Sbjct: 1539 DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVL--PSEPGT-SRASKA 1595

Query: 1583 PESVLRSVD-----------------------------FHALEDALKIKFKDRGLLVEAI 1613
            P S   + D                             F   E  +   F+++  L++A 
Sbjct: 1596 PSSRTSAADLSYGWLKIPPRCMLAHPDAERTLQHLISGFENFEKKINYSFQNKAYLLQAF 1655

Query: 1614 THASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFAR 1672
            THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA 
Sbjct: 1656 THASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFAS 1715

Query: 1673 VAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKV 1723
            +AVK+  H + +  S  L   I DFV+  LE         EL +   +     D + PK 
Sbjct: 1716 LAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKA 1775

Query: 1724 LGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEG 1781
            +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P  PVREL E   + A+ 
Sbjct: 1776 MGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKF 1835

Query: 1782 LEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
               + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1836 SPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1884



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1268 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1327

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDG-DSSLFDQEKSVAEDKLG 1502
            Y+    KGL S +    F  P  W  PG +   D+ + D  DS +  +E+ +   + G
Sbjct: 1328 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKVDSEVGSKEELLTNGRTG 1385



 Score = 78.2 bits (191), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +   +T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTYLTPLSKFPSPE-------YETFAEYYKTKYNLDLSNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1266 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1323

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1324 NCNLYRLGKKKGL 1336



 Score = 49.3 bits (116), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 16/132 (12%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALT 1392
            ++ +PP     HP      R  Q L S     E          KINY     + +L+A T
Sbjct: 1609 WLKIPPRCMLAHP---DAERTLQHLISGFENFEK---------KINYSFQNKAYLLQAFT 1656

Query: 1393 AASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    
Sbjct: 1657 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1716

Query: 1450 ALSKGLQSYIQA 1461
            A+      Y +A
Sbjct: 1717 AVKYDYHKYFKA 1728


>gi|302321852|gb|ADL16770.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321856|gb|ADL16772.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321860|gb|ADL16774.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321862|gb|ADL16775.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321864|gb|ADL16776.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321868|gb|ADL16778.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321870|gb|ADL16779.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321872|gb|ADL16780.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321874|gb|ADL16781.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321876|gb|ADL16782.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321962|gb|ADL16825.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321964|gb|ADL16826.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321970|gb|ADL16829.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321992|gb|ADL16840.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322048|gb|ADL16868.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322052|gb|ADL16870.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322054|gb|ADL16871.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322056|gb|ADL16872.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322058|gb|ADL16873.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322096|gb|ADL16892.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322100|gb|ADL16894.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322130|gb|ADL16909.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322176|gb|ADL16932.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322180|gb|ADL16934.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322188|gb|ADL16938.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  272 bits (695), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 134/175 (76%), Positives = 150/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIGVYYVEGGKXAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
          Length = 1970

 Score =  272 bits (695), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 223/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A  +NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 35   RKYQVELLEAALDRNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRHGKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVL+MT  + L +L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYAHLEVLASWTKEKWNQEFTKHQVLIMTCYVALIVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 153  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 210  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPYEIVVDCGPFMDRSGLYERL-LMEL-- 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +  A  + R    +S++  +D  A L+            LG
Sbjct: 265  EEALN---------FVNDCNISAHSKERDSTLISKQILADCRAVLVV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      A+  +   
Sbjct: 305  PWCADKVAGMMVRELQKHIKHEQEELHRKFLPFTDTFLRKIHALCEEHFSPAALDLRFVT 364

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 365  PKVIRLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 424

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 425  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 484

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 485  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 544

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 545  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDVFPPY 604

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 605  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 660

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 661  INSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 717

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 718  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 751



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 154/332 (46%), Gaps = 61/332 (18%)

Query: 1439 QMVSNLVLYQYALSK--GLQSYIQADRFAPSRWAAP-----GVLPVFDEDTKDGDSSLFD 1491
            Q + N+++   A  K   L  +  AD  +   W  P     G +P F  D +D D S +D
Sbjct: 1439 QFIDNMLMGSGAFVKKIPLSPFSAAD--SAYEWKMPKKASLGSMP-FSADFEDFDYSSWD 1495

Query: 1492 QEKSVAEDKLGTDKNY-----NEYEDD---DMEDGELEGDSSSYRVLSSKTLADVVEALI 1543
                +   K G + ++     N  E++   D     +  D  + + ++ K++AD VEAL+
Sbjct: 1496 AMCYLDPSKAGEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALL 1555

Query: 1544 GVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPACV---------------- 1582
            G Y    G+ AA   +  +G++V      ++ E+  CP+R  C                 
Sbjct: 1556 GCYLTSCGERAAQLFLCSLGLKVLPVIKRTEHEKAMCPARENCSSQQRSLSGSRAAAAGK 1615

Query: 1583 ----------PESVLRSVD-----------FHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                      P  +    D           F   E+ +  +FK++  L++A THAS   +
Sbjct: 1616 DVEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEEKINYRFKNKAYLLQAFTHASYHYN 1675

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +AVK+  H
Sbjct: 1676 TITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYH 1735

Query: 1681 VHLRHGSSALDRQIRDFVKEVLEELLKPGFNS 1712
             + +  S  L + I  FV+  LE+    G +S
Sbjct: 1736 KYFKAVSPELFQVIDVFVQFQLEKNEMQGMDS 1767



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPS++ R+  +L A +L+
Sbjct: 1044 LPSVLYRLHCLLTAEELR 1061



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPG 1473
            Y+    +GL S +    F  P  W  PG
Sbjct: 1347 YRLGKKRGLPSRMVVSIFDPPVNWLPPG 1374



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQ 1778
            PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  PVREL E   + 
Sbjct: 1853 PKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1912

Query: 1779 AEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1913 AKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1964



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1285 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1342

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1343 NCNLYRLGKKRGL 1355



 Score = 49.7 bits (117), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       ++KINY     + +L+A T AS
Sbjct: 1624 IPPRCMFDHP------DADKTLTHLISGFEN------FEEKINYRFKNKAYLLQAFTHAS 1671

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1672 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1731

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1732 YDYHKYFKA 1740


>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
 gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
          Length = 1457

 Score =  272 bits (695), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 211/716 (29%), Positives = 337/716 (47%), Gaps = 112/716 (15%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           E AR YQ ++  QA+K N IA+L TG GKTLI+VLL+R +C   Q + K    +FLVPKV
Sbjct: 17  EVARKYQEEIFRQAQKGNVIAYLRTGLGKTLISVLLMRWMCT--QEKAKDKAIIFLVPKV 74

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV QQA  I +QTG       G +   F D   W++ F    V V T Q+ L  + H++
Sbjct: 75  ALVEQQANYIHKQTGLRTCKIHGALNLSFADRDGWKKRFADHDVFVTTPQMFLEAITHAV 134

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
            K+E  +L+I DECHHA K HPY+ +M E++       RP +FGMTASP       +Q +
Sbjct: 135 WKIEQCSLIIFDECHHARKNHPYNGIMREYFQVQPLNARPKIFGMTASP-----YWNQKN 189

Query: 482 CAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            A+ +  LE+ LD+ +  + +  +EL+ H    +EV+ +Y      ++  E      ++V
Sbjct: 190 PALSLSTLEANLDAKIIGVHEHVEELQSHYSKLNEVIEKYPYPPETYNFPEPTLYQCLSV 249

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
             A+  +S      F        K  +R                        N  LG +G
Sbjct: 250 FYASDPTS------FDAMDIPWTKLAMRH-----------------------NMTLGNIG 280

Query: 601 QWCA----------------YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
            +CA                YKV +   T  QND  A   + +    ++ +K+  L   +
Sbjct: 281 PYCASLYLFSEMRHILSGLHYKVMKILATEEQNDAMA---IKIDVSSAHPTKLPPLALYD 337

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
           L+E         ++D   GF              + + VS  E  ++ I   V     TP
Sbjct: 338 LLE---------IID---GF--------------EPYFVSSEETSELPI--PVPLDWCTP 369

Query: 705 KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE 763
           K++ ++ I ++       + IIFVE+   A  L +V   +P L    K   L+GH  + +
Sbjct: 370 KLRIMVNI-IRSHLANPIQMIIFVEQRQTAACLAQVLEVIPELKGLAKCGYLMGHGTAGD 428

Query: 764 MRTFQMQ-----ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
           +     +     + I  FR+  + +L+ATSVAEEGLD   C +VIRFD  K ++ Y+QSR
Sbjct: 429 ITRRDEERKSKADPIKLFREKEINILIATSVAEEGLDFPACELVIRFDPPKHLVGYVQSR 488

Query: 819 GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
           GRAR   S YI+MI++ +       +  +  E  L K    RT +    ++  +   D  
Sbjct: 489 GRARSKVSKYIVMIQQEDTDQLERYQALQRGELELSKTYHNRT-MPERDESDTMYDDDTH 547

Query: 879 PGTV-----YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS-ILRPEFIMERHEKPGGPT 932
           P  +     + V STGAV++ ++A+ LI+  C+ +P D ++   +P+FI           
Sbjct: 548 PMDLAERERFVVPSTGAVLTYDNALSLINHLCALIPRDSFTEAYKPQFI----------G 597

Query: 933 EYSCKLQLPCNAPFEKLE----GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           ++  +++LP + P +  +    G    S + A+++V   A K+L ++  F D LLP
Sbjct: 598 DFQSRMRLPASLPLQPRDLVYLGYPKRSKQEAKRSVAFQAVKRLLKLNVFDDYLLP 653



 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 282/628 (44%), Gaps = 92/628 (14%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGPLE--YSSYADYYKQKYGVELIFKKQPLIRGRG 1303
            G+ + ++ IR ++  +S  P+     G LE  Y +Y  Y+  K+      KK+     +G
Sbjct: 820  GRIYQLQCIRNDLALDSRPPQ-----GSLEGGYDTYRRYFATKWAR----KKREAFLPKG 870

Query: 1304 VSYCKNLLSPRFEHSEEQEGEGEEILDK------TYYVFLPPELCFIHPLPGSLVRGAQR 1357
                +  +  R +  E     G   + K      TY   LP + C +   P SL    + 
Sbjct: 871  GPLIEATVLARVDSGEYDHEGGNTTIKKAKTDGRTY--ILPRDCCRVLHFPTSLSNTFRV 928

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWV 1416
            LP++ R++  +  A   +  +  P    KIL E+LT  +    F  +R E LGDA L+  
Sbjct: 929  LPALCRKITDIYRARVARIALRLPFIEDKILIESLTIPAALLAFSNQRLETLGDAVLQLC 988

Query: 1417 VSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLP 1476
             +  LF +YP +HEGQLT +R+  VSN  L Q AL  GL+ YI  +  + +RW       
Sbjct: 989  TTVHLFNQYPNRHEGQLTTLRRATVSNKFLLQRALEMGLEEYITVEIASVARWRY----- 1043

Query: 1477 VFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLA 1536
                                    LG             ED +     S   ++  ++L 
Sbjct: 1044 -----------------------ILG-------------EDADTAPPRSVRTLVPRRSLQ 1067

Query: 1537 DVVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSR-PACVPESVLRSVDFHA 1594
            D +EAL+G  +++GG   A      +G++     P E+    + PA V  + L    F  
Sbjct: 1068 DCMEALLGASFLQGGIPMALQAGPSLGVEFGGPLPWEMRYERKGPAEVATTHL----FDT 1123

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            L++ L   F    +LVEA+TH S  + G S YQRLEF+GDA+LD ++  +L+  +     
Sbjct: 1124 LQERLGYTFHSNSILVEAVTHPSFATDGPS-YQRLEFLGDAILDLVVVHYLYEKFPEANS 1182

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVH--LRHGSSALDRQIRDFV---KEVLEELLKPG 1709
             +L+ LRA  +     A +A+K +L VH  L   +  L R I  +V   +++ +E +   
Sbjct: 1183 HQLSLLRAKVICAPTLAYLAIK-ELGVHKILLINNMGLYRAIEAYVPVFEDITDEEIARS 1241

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSG----RDTSVVWQVFQPLLDPMVTPETLPM 1765
            +  F       PK + D+ ES+ GA+ +DSG    + ++VV  +   +LD +     +  
Sbjct: 1242 YYKF-----DPPKAISDVFESLVGAVLVDSGYNYDKTSAVVLDIMSKVLDQLSL--DMAK 1294

Query: 1766 HPVRELQERCQQQA-EGLEYKASRSGNL-ATVEVYIDGVQVG---VAQNPQKKMAQKLAA 1820
             PV  L E   Q     + +  +R  N  A V + + G QV    VA +P   +A+ +A+
Sbjct: 1295 DPVSLLLEWVAQHGCREISFSKNRKFNYDAGVVLEVHGKQVVGPIVASSP--GVAKFIAS 1352

Query: 1821 RNALAVLKEKETAEAKEKGDENGKKRKN 1848
              AL++L ++    A  K  +  + R+N
Sbjct: 1353 ERALSILTDESNELALSKLCDCEENRQN 1380


>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
          Length = 1493

 Score =  272 bits (695), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 222/696 (31%), Positives = 326/696 (46%), Gaps = 135/696 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIAVLL++       ND        +A FLV  
Sbjct: 85  REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 144

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      VGH+ G MG D W    W + F    V+V TA+IL   L +S
Sbjct: 145 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 204

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IKM  IN+LI DE HH  K HPY+ ++ + Y      KRP +FGMTASP++ KG     
Sbjct: 205 YIKMSQINILIFDEAHHTKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG----- 259

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK-----AASLWS-LHEQLK 534
           D   +   LE  LDS + T  +   L +    P E V  ++K     A SL+  L ++  
Sbjct: 260 DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDRFG 319

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
            M      A      R  WQ                                        
Sbjct: 320 DM------ACLEGIFRFAWQ---------------------------------------- 333

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           A  ELG+WC+    +++  AL +D               L K         +EG+V +K 
Sbjct: 334 ASSELGRWCS---DRAWARALADD--------------VLPK---------LEGSV-RKT 366

Query: 655 AKVVDSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           A    S N   E    EI    E  E++ S+  S  E            G+++PKVQ L 
Sbjct: 367 ANSETSSN-VPESAYKEILRITEASEIVKSYAFSSPETF----------GQLSPKVQVLR 415

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---R 765
           + L +Y  + TE  + I+F ++   AL+L ++F  L ++ F++   LIG  +        
Sbjct: 416 EELARYFGRQTET-KCIVFTQKRYTALILAELFQTL-NIPFLRPGVLIGVRSGDLAGMNI 473

Query: 766 TFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
           TF+ Q  ++ KFR G +  L ATSVAEEGLDI  CN+V+RFDL +T++ Y+QSRGRAR  
Sbjct: 474 TFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRGRARHF 533

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV-- 882
            S Y  M+ERGNL H   L   +++E+ +  ++  RT    L +   L   D    TV  
Sbjct: 534 NSTYASMVERGNLEHEQRLLEVQDAEKMM--QSFCRT----LPEDRLLYGFDHDLDTVLQ 587

Query: 883 -------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE-- 933
                  ++++STGA ++ +SA  ++  Y S L  ++    +  +++        P    
Sbjct: 588 KDEGNRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVV-------LPINGA 640

Query: 934 YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           + C++ LP  +P   L G       +A+++     C
Sbjct: 641 FVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTC 676



 Score =  165 bits (417), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 158/591 (26%), Positives = 254/591 (42%), Gaps = 102/591 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL        ++  + E  ++   ++ + P    +  +P S     
Sbjct: 937  QPVLRAELVRLRRNLL--------DKMTDTERDVETRCFICIEP--LKVSAIPASTAFSC 986

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+++ L+++Q  + +N+ V     LEA T  S        Q+          
Sbjct: 987  LAFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGRN 1046

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1047 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1106

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                         KL   K+++            +
Sbjct: 1107 RGFSRHTWYPEGL-------------------------KLLQGKDHSR-----------K 1130

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA- 1580
              + S   L+ KT+ADV EALIG   + GG D          + V++    V  PS  A 
Sbjct: 1131 ATTESKHALAEKTIADVCEALIGAALLSGGPDHR------FDMAVKAVTTLVNSPSHKAE 1184

Query: 1581 ---------CVPESVLRSVD------FHALEDALKIKFKDRGLLVEAITHASRPSS--GV 1623
                      +P+   R+ D         +E+ L  +F+   LL  A TH S PS+   V
Sbjct: 1185 RWKDYISFYTIPKYQRRAADGAELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKV 1244

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GD+++D +  + LF  + +  P  LT+ + A V+N+    +AVK  LH HL
Sbjct: 1245 PCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHL 1304

Query: 1684 RHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
            ++ S+ L  QI  + +E+   E    G   +       PK L D+VE+  GA+F+DS  +
Sbjct: 1305 KYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFN 1364

Query: 1743 TSVVWQVF----QPLLDPMVTPETLP-MHPVRELQER----------CQQQAEGLEYKAS 1787
              V+ + F    +P  + M   +T    HP   L  R          C +  E      +
Sbjct: 1365 FEVIERFFRDYIKPFFEDMAIYDTFANKHPTTFLHNRLTNEFGCVNYCLKAGEMPSIDGA 1424

Query: 1788 RSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
             +G LA V V+   +  G A +   + A+  A+  ALAVL E  +AE + K
Sbjct: 1425 PAGVLAAVIVHDVVIAEGTATS--GRYAKVKASEKALAVLDEISSAEFQRK 1473


>gi|302321846|gb|ADL16767.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321848|gb|ADL16768.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321850|gb|ADL16769.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321854|gb|ADL16771.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321858|gb|ADL16773.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321866|gb|ADL16777.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321878|gb|ADL16783.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321880|gb|ADL16784.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321882|gb|ADL16785.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321884|gb|ADL16786.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321886|gb|ADL16787.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321888|gb|ADL16788.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321890|gb|ADL16789.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321892|gb|ADL16790.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321894|gb|ADL16791.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321896|gb|ADL16792.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321898|gb|ADL16793.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321900|gb|ADL16794.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321902|gb|ADL16795.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321904|gb|ADL16796.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321906|gb|ADL16797.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321908|gb|ADL16798.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321910|gb|ADL16799.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321912|gb|ADL16800.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321914|gb|ADL16801.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321916|gb|ADL16802.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321918|gb|ADL16803.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321920|gb|ADL16804.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321922|gb|ADL16805.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321924|gb|ADL16806.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321930|gb|ADL16809.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321932|gb|ADL16810.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321934|gb|ADL16811.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321936|gb|ADL16812.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321938|gb|ADL16813.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321940|gb|ADL16814.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321942|gb|ADL16815.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321944|gb|ADL16816.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321946|gb|ADL16817.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321948|gb|ADL16818.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321950|gb|ADL16819.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321952|gb|ADL16820.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321954|gb|ADL16821.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321956|gb|ADL16822.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321958|gb|ADL16823.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321966|gb|ADL16827.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321968|gb|ADL16828.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321976|gb|ADL16832.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321978|gb|ADL16833.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321980|gb|ADL16834.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321982|gb|ADL16835.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321984|gb|ADL16836.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321986|gb|ADL16837.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321988|gb|ADL16838.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321990|gb|ADL16839.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321994|gb|ADL16841.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321996|gb|ADL16842.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321998|gb|ADL16843.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322000|gb|ADL16844.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322002|gb|ADL16845.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322004|gb|ADL16846.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322006|gb|ADL16847.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322008|gb|ADL16848.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322010|gb|ADL16849.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322014|gb|ADL16851.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322016|gb|ADL16852.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322018|gb|ADL16853.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322020|gb|ADL16854.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322022|gb|ADL16855.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322024|gb|ADL16856.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322026|gb|ADL16857.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322028|gb|ADL16858.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322030|gb|ADL16859.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322032|gb|ADL16860.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322034|gb|ADL16861.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322036|gb|ADL16862.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322038|gb|ADL16863.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322040|gb|ADL16864.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322042|gb|ADL16865.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322044|gb|ADL16866.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322046|gb|ADL16867.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322050|gb|ADL16869.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322060|gb|ADL16874.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322062|gb|ADL16875.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322064|gb|ADL16876.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322066|gb|ADL16877.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322068|gb|ADL16878.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322074|gb|ADL16881.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322076|gb|ADL16882.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322078|gb|ADL16883.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322080|gb|ADL16884.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322082|gb|ADL16885.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322084|gb|ADL16886.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322086|gb|ADL16887.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322090|gb|ADL16889.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322092|gb|ADL16890.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322104|gb|ADL16896.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322106|gb|ADL16897.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322108|gb|ADL16898.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322110|gb|ADL16899.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322112|gb|ADL16900.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322114|gb|ADL16901.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322116|gb|ADL16902.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322118|gb|ADL16903.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322120|gb|ADL16904.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322122|gb|ADL16905.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322124|gb|ADL16906.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322126|gb|ADL16907.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322128|gb|ADL16908.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322132|gb|ADL16910.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322134|gb|ADL16911.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322136|gb|ADL16912.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322138|gb|ADL16913.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322140|gb|ADL16914.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322142|gb|ADL16915.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322144|gb|ADL16916.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322146|gb|ADL16917.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322148|gb|ADL16918.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322152|gb|ADL16920.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322154|gb|ADL16921.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322156|gb|ADL16922.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322158|gb|ADL16923.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322160|gb|ADL16924.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322162|gb|ADL16925.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322164|gb|ADL16926.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322166|gb|ADL16927.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322168|gb|ADL16928.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322170|gb|ADL16929.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322178|gb|ADL16933.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322204|gb|ADL16946.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322206|gb|ADL16947.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322212|gb|ADL16950.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/175 (76%), Positives = 150/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|302321926|gb|ADL16807.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321928|gb|ADL16808.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321960|gb|ADL16824.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321972|gb|ADL16830.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302321974|gb|ADL16831.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322094|gb|ADL16891.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322098|gb|ADL16893.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322102|gb|ADL16895.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322150|gb|ADL16919.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322172|gb|ADL16930.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322174|gb|ADL16931.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322182|gb|ADL16935.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322184|gb|ADL16936.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322186|gb|ADL16937.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322190|gb|ADL16939.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322192|gb|ADL16940.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322194|gb|ADL16941.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322196|gb|ADL16942.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322198|gb|ADL16943.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  271 bits (694), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 134/175 (76%), Positives = 150/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|302800610|ref|XP_002982062.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
 gi|300150078|gb|EFJ16730.1| hypothetical protein SELMODRAFT_421514 [Selaginella moellendorffii]
          Length = 497

 Score =  271 bits (693), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 209/603 (34%), Positives = 287/603 (47%), Gaps = 121/603 (20%)

Query: 319 NTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV 378
           NTI  LETG GKT+IAVLLIRS+ + L R+ +K + VFL P V L  QQAEVI   T   
Sbjct: 2   NTIVCLETGCGKTMIAVLLIRSL-SHLFRKPEKGICVFLAPTVSLCEQQAEVIERYTDLY 60

Query: 379 VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHA 438
           VG Y G  G    D   W      ++V VMT  ILL+ LRH     + + LLI DECHH 
Sbjct: 61  VGTYVG--GTSTMDVHWWTTHLQKQEVFVMTPAILLDNLRHRFFNPDHVELLIFDECHHC 118

Query: 439 VKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG--------VSSQVDCAIKICNLE 490
            K HPY+ +MSEFYH   + K P + GMTASP+  KG             DC      LE
Sbjct: 119 AKGHPYANIMSEFYH-KPEAKCPRILGMTASPIVGKGKTWSGPQAFKESFDC------LE 171

Query: 491 SKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRR 550
           + L S + T  D KEL   +P                         ++ ++E    +  +
Sbjct: 172 TMLRSKIITFAD-KELTSFLP-----------------------SSDMKIKEHLPDTKGK 207

Query: 551 SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQS 610
            +   +  R      E R         E   A N I     +NY L ELG + A K A+ 
Sbjct: 208 HRTTDIDNRFENLTREFRL-------PEERQAVNKIYN--TLNYCLFELGLFSARKAAEI 258

Query: 611 FLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTN 670
            L                                         D K  D+E  F+    N
Sbjct: 259 MLAGC--------------------------------------DGKGRDAEAAFLRRVLN 280

Query: 671 EIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVER 730
            +EE  +LD      G   D I         ++ KVQ L+ +L +Y+  +D R I+FVER
Sbjct: 281 ILEEKAILD------GTADDQIRA-------ISSKVQLLLDVLDEYKSAQDLRCIVFVER 327

Query: 731 VVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSV 789
           V+AA VL  +    P   +V++  +  H N  +  T   Q  ++  FR G+  ++VAT+V
Sbjct: 328 VIAAKVLTLLLNSRP---YVRAQCVASHRNKLKGLTLATQRNSLEDFRAGKANVIVATNV 384

Query: 790 AEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNS 849
           AEEGLDI+ C++VIRF++ KT  + IQSRGRARK GSDY++++E GNL+    L      
Sbjct: 385 AEEGLDIQSCSLVIRFNMPKTERSSIQSRGRARKQGSDYVILMESGNLNEEKLLHAILEG 444

Query: 850 EETLRKEAIERTDLSHLKDT--SRLI--SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
           E+ + ++      L  ++DT   +L     DA     Y VESTGAVV+++S+V L+H YC
Sbjct: 445 EKLMHEQ------LHTVQDTYDHQLFYRQKDA-----YHVESTGAVVNIDSSVSLLHQYC 493

Query: 906 SQL 908
           S L
Sbjct: 494 STL 496


>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
            porcellus]
          Length = 1929

 Score =  271 bits (693), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 224/754 (29%), Positives = 359/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVPQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCSVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LTFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEADVDPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   + L+P    G++  K ++  +
Sbjct: 671  INSPLRASIIGPPMSCVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 225/486 (46%), Gaps = 87/486 (17%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1449 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1500

Query: 1477 VFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY-----NEYEDD---DMEDGELEGDSSSYR 1528
             F  D +D D S +D    +   KL    ++     N  E++   D     +  D  + +
Sbjct: 1501 -FSSDFEDFDYSSWDAMCYLDPAKLLKRDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQ 1559

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRP---- 1579
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +  E+  CP+R     
Sbjct: 1560 CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGREKALCPARENFSS 1619

Query: 1580 ---------------------------ACV---PESVLRSVD-----------FHALEDA 1598
                                        C+   P  +    D           F   E  
Sbjct: 1620 QQKSLSGSCASAAAAGSRSSACKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEKK 1679

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1680 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1739

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL + 
Sbjct: 1740 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRS 1799

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  
Sbjct: 1800 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRS 1859

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1860 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1917

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1918 SLKANQ 1923



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1395



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.9 bits (115), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1651 IPPRCMFDHP------DADKTLTHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1698

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1699 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1758

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1759 YDYHKYFKA 1767


>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
          Length = 1537

 Score =  271 bits (692), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 213/681 (31%), Positives = 324/681 (47%), Gaps = 105/681 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQ-RQNKKM--LAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +I N+L  R N K   ++ FLV  
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDS 186

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      V H+ G MG D WD + W +      V+V TA+IL   L +S
Sbjct: 187 VTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNS 246

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            ++M+ INLLI DE HHA K HPY+ ++ + Y      +RP VFGMTASP++ KG     
Sbjct: 247 YVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKG----- 301

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LE+ LDS + T      L + V  P E V  Y++            +   A 
Sbjct: 302 DITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAYNRL-----------EPPFAT 350

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E           ++ M  R  G  + L  VY  +    S                  ELG
Sbjct: 351 E----------LYKLMDTR-YGNIKVLEGVYRFAWNASS------------------ELG 381

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
           +WC+    +++  AL +D               L K+         EG ++K        
Sbjct: 382 KWCS---DRAWWHALADD--------------VLPKL---------EGNINK-------- 407

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVAD----GKVTPKVQSLIKILLK- 715
               +E  T + E G +    ++   E  + +      D    G+++PKVQ L   L K 
Sbjct: 408 ---LIESNTMKAEHGAVFKD-IIRIREASETVKNYFFTDPELPGELSPKVQRLRMELSKH 463

Query: 716 YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ---EMRTFQMQ-E 771
           +  T   + I+F ++   A +L ++F  L ++  ++   LIG           TF+ Q  
Sbjct: 464 FNDTTGTKCIVFTQKRYTAKILNELFTVL-NIPNLRPGVLIGVRPGDIGGMNITFRQQFL 522

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
            + KFR G +  L ATSVAEEGLDI  CN+VIRFDL +T++ Y+QSRGRAR   S Y +M
Sbjct: 523 ALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGRARHCTSTYAIM 582

Query: 832 IERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-TVYQVEST 888
           +E+ N  H   L+  R +E  +R+  E +    + H  D      +    G   + V+ST
Sbjct: 583 VEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGNDHDLDSFLQEEEGRRTFTVKST 642

Query: 889 GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
           GA ++ +SA+ ++  Y S L  ++ ++ +  +++           Y C++ LP  +P   
Sbjct: 643 GAKLTYHSAIAILARYASSLQYEKETVPQVTYVVT-----IASNAYVCEVILPEKSPIRG 697

Query: 949 LEGPVCSSMRLAQQAVCLAAC 969
           L G       +A+++     C
Sbjct: 698 LTGSPAMRKAVAKRSAAFDTC 718



 Score =  152 bits (385), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 250/597 (41%), Gaps = 89/597 (14%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL       +E + E           F+  E   I  LP S+V   
Sbjct: 979  QPVLQAELVRLRRNLLDKMTTQEKEMQTE----------CFICAEPLRISALPPSIVSTC 1028

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L+A++  D++   +     LEA T  S         Q  F       
Sbjct: 1029 LAFPAIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKN 1088

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1089 YERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRS 1148

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +     KD  + L  + K                           
Sbjct: 1149 RGFSRHIWYPDGLTLLHG---KDHSTKLLSEGK--------------------------- 1178

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVGC----- 1575
                    L  KT+ADV EALIG   + GG +    +  K +   V+S    V C     
Sbjct: 1179 ------HALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYI 1232

Query: 1576 --PSRPACVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQR 1628
               + P    E    S D  A  +E+ L   F    LL  AITH S PS+    V CYQR
Sbjct: 1233 TLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQR 1292

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  + LF  + +  P  L++ + A V+N+    ++VK   H  +   S+
Sbjct: 1293 LEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSN 1352

Query: 1689 ALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
             L  QI  +V+E+   +    G   + +     PK L D+VE+  GAIF+DS  D  V+ 
Sbjct: 1353 PLQAQITHYVEEIETAQAESQGAVDYWVVAKDPPKCLPDMVEAYLGAIFVDSKFDFQVIE 1412

Query: 1748 QVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------ 1796
              F+    P  + M   +T    HP   L  +   +     Y   ++G L T++      
Sbjct: 1413 AFFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNY-CLKAGELPTIDGAPATV 1471

Query: 1797 ---VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGT 1850
               V + G  +  A++   + A+  A+  ALAVL     +E  +K   + K+ KN +
Sbjct: 1472 LAAVIVHGNVISEARSSSSRYAKITASEKALAVLDGLLPSEFCQKYRCDCKETKNSS 1528


>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
          Length = 1922

 Score =  271 bits (692), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 220/759 (28%), Positives = 359/759 (47%), Gaps = 79/759 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y      + W  ++W +EF   QVLVMT  + L +LR+ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSSLEVIESWTKEKWSQEFSKHQVLVMTCHVALTVLRNE 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
             + +  INLL+ DECH A++ H Y  +M   E Y +      P + G+TAS +N  G   
Sbjct: 163  YLSLSNINLLVFDECHLAIQDHAYREIMKICEGYPSC-----PRILGLTASILN--GKCD 215

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSLHEQLKQ 535
              +   KI  LE  L S   T  D   L+++   P E+VV+   Y   + L+     LK+
Sbjct: 216  PAELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYG--RLLKE 273

Query: 536  MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
            ++ A+              F+   +     + R    +S++  SD  A L+         
Sbjct: 274  LDEAL-------------TFLNDCNISVHSKERDSTLISKQILSDCRAVLVV-------- 312

Query: 596  LGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++ 
Sbjct: 313  ---LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLD 369

Query: 652  KK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
             K    KV+       +    E ++ E ++ +     ++      +   D     + +  
Sbjct: 370  LKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEK 429

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH------- 758
             +       T     IIFVER   A+VL ++  E     P L+++ S  + GH       
Sbjct: 430  PETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQP 489

Query: 759  -NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
             N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS
Sbjct: 490  RNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQS 549

Query: 818  RGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD 876
            +GRAR P S+YI++ +   + S    L+  +  E+ LR +  +  D S  +    +   D
Sbjct: 550  KGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDD 609

Query: 877  AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
              P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P   T YS 
Sbjct: 610  VFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDH-TFYS- 665

Query: 937  KLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             L LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G++  K 
Sbjct: 666  TLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VGKETVKY 722

Query: 996  DQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 723  EEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 221/486 (45%), Gaps = 87/486 (17%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P    +    
Sbjct: 1442 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSHFSTTDSNYEWKVPKKSSLGNVQ 1493

Query: 1478 FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYR 1528
            F  D  D D S        D  K+V ED       +N  E++   D     +  D  + +
Sbjct: 1494 FSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGLDAGKQSISYDLHTEQ 1552

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPAC-- 1581
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V     ++D E   C +R  C  
Sbjct: 1553 CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGALCATRENCNS 1612

Query: 1582 -----VPESVLRSV--------------------------------------DFHALEDA 1598
                  P S   SV                                       F   E  
Sbjct: 1613 EQKNPSPNSFSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKK 1672

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1673 INYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1732

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  +E         EL + 
Sbjct: 1733 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRS 1792

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  
Sbjct: 1793 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRS 1852

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1853 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1910

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1911 SLKANQ 1916



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KGL S +    F  P  W  PG   + ++D  + D   +++++   E+ L   K
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTDK--WEKDEMTKENLLANGK 1414



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 64/230 (27%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D                             ++  
Sbjct: 1752 YDYHKYFKA--------VSPELFHVID-----------------------------DFVQ 1774

Query: 1513 DDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
              ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1775 FQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1824



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1297 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1354

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1355 NCNLYRLGKKKGL 1367


>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
          Length = 1922

 Score =  270 bits (691), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 224/760 (29%), Positives = 365/760 (48%), Gaps = 72/760 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  ++   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRSGRR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVTASWTKEKWNQEFTKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   ++++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILRSNAETATDLVVVDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   +     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV-PG 880
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D     DT  ++  D V P 
Sbjct: 555  APISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE-ADTEPVVDDDDVFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + E  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPED-GPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 668

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP  S +RLA++ V L  C++LH++G   D L+P    G++  K ++  
Sbjct: 669  PINSPLRASIVGPPMSCIRLAERVVALICCERLHKIGELDDHLMP---VGKETVKYEEEL 725

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEWILSGR 1031
            +            PG+ + R+ YP+ + + L+  +   G+
Sbjct: 726  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPGQ 765



 Score =  177 bits (450), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 229/487 (47%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G LP
Sbjct: 1442 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLP 1493

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1494 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1551

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1552 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFT 1611

Query: 1579 ----------------------------------PACV---PES--VLRSV--DFHALED 1597
                                              P C+   P++   LR +   F   E 
Sbjct: 1612 SQQKNLSGSRTAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEK 1671

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1672 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1731

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1732 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1791

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1792 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1851

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1852 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1909

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1910 RSLKANQ 1916



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 943  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 995

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 996  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1052

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1053 LPSILYRLHCLLTAEELR 1070



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1386



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.9 bits (115), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP      R  + L S     E          KINY     + +L+A T AS
Sbjct: 1644 IPPRCMFDHP---DADRTLRHLISGFENFEK---------KINYRFKNKAYLLQAFTHAS 1691

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1692 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1751

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1752 YDYHKYFKA 1760


>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1509

 Score =  270 bits (691), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 218/709 (30%), Positives = 336/709 (47%), Gaps = 131/709 (18%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDL-QRQNKK--MLAVFLVPK 360
           R YQL++ E+AK  NTIA L+TG+GKTLIAVLL++  I N+L  R N K   ++ FLV  
Sbjct: 94  REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 153

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W    W + F    ++V TA++L   L  S
Sbjct: 154 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 213

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+ME INLLI DE HHA K HPY+ ++ +FY      + RP +FGMTASPV+ K     
Sbjct: 214 FIQMERINLLIFDEAHHAKKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPVDAK----- 268

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
           VD       LE+ LDS + T  +   L + +P P+E +  YD+                 
Sbjct: 269 VDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR----------------- 311

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +++ +++   +S    M +R  G   EL +++  +    S                   L
Sbjct: 312 LDDPSETELYKS----MQSR-FGRIRELEKIFSFALEASS------------------TL 348

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G+WC+             D    + LD    E+ L K         +EG +SK     + 
Sbjct: 349 GRWCS-------------DWLWTFALD----EAELPK---------LEGKISK---SYMQ 379

Query: 660 SENGFVEGGTNEI-----EEGELLDSHV----VSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           S +G    G +E      E  +L+ SH     V   EH             ++ KV+ L 
Sbjct: 380 SRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEH-------------LSSKVRLLS 426

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTF 767
             L  Y  +HT D + I+F+++   A +L ++F+ + +   +++  LIG  ++      F
Sbjct: 427 HELSMYFERHT-DTKCIVFIQQRYTARLLAELFSRIGT-QHMRTGVLIGVRHDGIGGANF 484

Query: 768 QMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
             ++   T+ KFR G +  L ATSVAEEGLDI  CN+VIRFDL  T++ Y+QSRGRAR  
Sbjct: 485 SFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRGRARHS 544

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--------ERTDLSHLKDTSRLIS 874
            S Y  M+ER NL H++ +   + +E  +R+  EA+           DL  + D  R   
Sbjct: 545 HSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSDDLGMILDNERY-- 602

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEY 934
                   + + STGA ++  S++ ++  Y S L  +     +  + +ER +       +
Sbjct: 603 -----RNSFTIHSTGAKLTYESSLAVLAHYASSLQYENDMSAQVNYFIERIDGA-----F 652

Query: 935 SCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            C+  LP  +PF  + G   +    A+Q+     C  L + G   D  +
Sbjct: 653 VCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGLLDDHFV 701



 Score =  155 bits (392), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 218/489 (44%), Gaps = 86/489 (17%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP+ R   V   +NLL      +E+++GEG      TYY+   PE   I  LP  +   
Sbjct: 950  KQPVFRAELVRLRRNLLD---RETEQEKGEG-----TTYYIC--PEPLRISALPAPVAAF 999

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  D ++  +     LEALT  S         Q  F      
Sbjct: 1000 AFAFPAIISRLESYLISLEACDMLHINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGK 1059

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +I+
Sbjct: 1060 NYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIR 1119

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                                        +  G+ 
Sbjct: 1120 TQGFSRRNWYPEGI---------------------------------------KLLQGKA 1140

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGK----DAANHLMKWIGIQVESD---PEEV 1573
            + +S +   L  KT+AD+ EALIG   + GGK    D+A   +K +   V SD     E 
Sbjct: 1141 KSESQNKHSLGDKTIADICEALIGASLLSGGKAHRFDSA---VKAVTTFVNSDDHRASEW 1197

Query: 1574 GCPSRPACVPESVLRSVDFHALE------DALKIKFKDRGLLVEAITHASRPS--SGVSC 1625
             C      +P+  +   D   L+      D L  +F+   LL  A THAS PS  S V C
Sbjct: 1198 NCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPC 1257

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GD++LD +  ++L+  Y +  P  LT+ + A V+N+    VAVK  LH HL +
Sbjct: 1258 YQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIY 1317

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNS---FGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             S+AL  QI  +V+E+  EL +   N+           PK L D++E+  GAIF+DS   
Sbjct: 1318 FSNALLGQITRYVEEI--ELAEADSNNSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFK 1375

Query: 1743 TSVVWQVFQ 1751
              VV   FQ
Sbjct: 1376 FEVVEDFFQ 1384


>gi|396465578|ref|XP_003837397.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
 gi|312213955|emb|CBX93957.1| similar to dicer-like protein 1 [Leptosphaeria maculans JN3]
          Length = 1588

 Score =  270 bits (691), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 209/703 (29%), Positives = 342/703 (48%), Gaps = 103/703 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND-LQRQ---NKKMLAVFLVPK 360
           R YQ ++  +AK +NTIA L+TG+GKT IA LL+R +  D L+ +       +A+FLV  
Sbjct: 118 RDYQTELFLRAKDQNTIAVLDTGSGKTHIATLLLRHVLEDELEHRATGGAPRIAIFLVDS 177

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQA V++      V   CG MG   W+   W + F    V+V TA++L+  + HS
Sbjct: 178 VNLVFQQANVLKCGLDQNVESICGSMGTSLWNKSTWDKHFQKNMVIVCTAEVLVQCVMHS 237

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I M  INLLI DE HHA   HPY+ +M ++Y    +  KRP +FGMTASP++++G+SS 
Sbjct: 238 FITMAQINLLIFDEAHHAKNNHPYARIMKDYYVQELNLSKRPRIFGMTASPIDVRGLSSD 297

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
                   +LE  L + + TI   K +   +  P E +  Y +   L S HE    +  A
Sbjct: 298 -HIKQAASDLEKLLHAKIATIDPEKLINNSISRPDEEIAVYPR---LESTHE--TPLHQA 351

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +++                   G     ++ +  S+R                   L EL
Sbjct: 352 IKDK-----------------YGDITAFQKFFIASKR------------------HLLEL 376

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV-- 657
           G W A  +  SF  A +   +   + + K+ ++ L            + +  + DAKV  
Sbjct: 377 GPW-ASDMYWSFAFAEEQSRKLQQREEFKYNKAKL------------DDSQQEWDAKVKR 423

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKY 716
           +     FV+  T E E                      +++D  ++ KV+ L   L L Y
Sbjct: 424 LKEAAEFVQQYTMETE----------------------SISDSDLSSKVRLLRYWLNLYY 461

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFVKSASLIGHNNSQEMRTFQMQETI- 773
           + T++ R I+FVE+   A +L  +F  +  P+L       L+G NN     +  ++  I 
Sbjct: 462 ERTDEPRCIVFVEKRETARLLKLIFERIGGPNL---HCGMLVGVNNRAGEESISLRNQIL 518

Query: 774 --AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
             + FR G +  + ATSVAEEGLDI QCN+V+RFDL +T++ Y+QSRGRAR   S Y+ M
Sbjct: 519 AVSSFRRGELNCIFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHTNSKYLHM 578

Query: 832 IERGNLSHATFLRNARNSEETLRK-----EAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
           +E GN  H   + + R+ E  +R+         R D S  +D + L+++  +    Y   
Sbjct: 579 LEDGNHDHRQRVMDVRSDEVVMRQFCQSLSQDRRIDGSD-EDGNDLLALSEILFPYYTDP 637

Query: 887 STGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIME--RHEKPGGP--TEYSCKLQLP 941
            +GA ++  S++ +++ + + +PS +R ++++P +I+    +  P  P  + + C++ LP
Sbjct: 638 KSGARLTYRSSLSILNHFIAVIPSPNRETMVQPTYIIRPATNYDPRNPLRSGFICEVILP 697

Query: 942 CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             AP   + G + S   +A+ +     C +L + G   + LLP
Sbjct: 698 EYAPIISITGKIESKKLIAKCSAAFMMCLELRKRGYLDENLLP 740



 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 233/573 (40%), Gaps = 91/573 (15%)

Query: 1240 VTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKK---- 1295
            +   + G+R+Y   I   +T +   P           ++  DY   ++       +    
Sbjct: 926  IDPMNGGRRYYSNCIASHLTPQDPVPAHVPKQNQKYMNTILDYTDSRWARSRDTSRWDPS 985

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++    + + +N L+ R E     E E +E+ +   YV   P+   I  +    V   
Sbjct: 986  QPVLEVEKIPFRRNHLA-RVE-----EKEQKELFELKNYVC--PQPLKISNIATPFVVMC 1037

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--------TF------C 1401
              LP+I+ R ES L+A+   + ++  V  +  LEALT  S            F       
Sbjct: 1038 YVLPAIIHRFESYLIALDACEVLDLHVSPALALEALTKDSENTDEHEEEKINFKSGMGPN 1097

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL---------- 1451
            YER E LGD +LK   S  +F++ P+++E +    R  M+ N  L + A+          
Sbjct: 1098 YERLEFLGDCFLKMATSLSVFVQQPEENEFEYHVRRMLMLCNQNLMETAIGVKKVARPDG 1157

Query: 1452 ---SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
               +  L  Y++ + F+   W    +                         KL   K  N
Sbjct: 1158 TEINLELPKYVRTEAFSRRTWYPEAL-------------------------KLIRGKGIN 1192

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK---------DAANHLM 1559
            + EDD ++     GD         K++ADV EA IG  ++E  K         D A   +
Sbjct: 1193 KSEDDWLKLRHNLGD---------KSVADVCEAFIGAAFMEHHKHGLWIPSQWDLAVKAV 1243

Query: 1560 KWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAI 1613
            K      +   E+          P+  L       L+ A +I+      FK   L+  A 
Sbjct: 1244 KLFANNPDHSMEKWTDYYAAYVKPKYQLDQPTAAMLDAARQIEAVHPYHFKYPRLVRSAF 1303

Query: 1614 THASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
            TH S       +  YQRLEF+GD++LD     HL++ Y +  P  LT+ +   V+N+   
Sbjct: 1304 THPSYAYMFEHIPNYQRLEFLGDSLLDMAFIMHLYYKYPDKDPQWLTEHKTPMVSNKFLG 1363

Query: 1672 RVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLGDIVES 1730
             V VK   H HL+  ++ L  QIRD+V E+ E E    G   + +   + PK L D++E+
Sbjct: 1364 AVCVKLGWHRHLKSNTAILSTQIRDYVLEIDEAEREANGAVDYWVNVHEPPKCLADVIEA 1423

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
               A+F+DS  D SVV   F   L P     TL
Sbjct: 1424 YVAALFVDSQFDFSVVQSFFDRHLKPFFADMTL 1456


>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
 gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
          Length = 1523

 Score =  270 bits (691), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 217/701 (30%), Positives = 327/701 (46%), Gaps = 124/701 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKK--MLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL++ I  +  + R N K   ++ FLV  
Sbjct: 117 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLLLKHIIQNELIDRANGKPPRISFFLVDS 176

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L +QQA V+R      V  + G MG D W  Q W  +F+   V+V TA+IL   L +S
Sbjct: 177 VTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQCLLNS 236

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+ INLLI DE HH  K HPY+ ++ E Y      KRP +FGMTASP++ KG     
Sbjct: 237 YIRMDQINLLIFDEAHHTKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTKG----- 291

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D       LE  LDS + T      L + V  P E   EYDK    ++            
Sbjct: 292 DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEYDKLDPPFA------------ 339

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                       +Q + AR  G    L+ V+  + +  S                  ELG
Sbjct: 340 ---------TKLYQILQAR-FGDISSLQPVFRFTLQASS------------------ELG 371

Query: 601 QWC-----AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
             C     AY +A   L  L+ + R       K  +S  S +    QC L E +  ++ +
Sbjct: 372 PCCADRAWAYALADDVLPKLEGNVR-------KLAQSISSPIP---QCALKEISRIQEAS 421

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            +V + +                +S  V G               +++PKVQ L + L+K
Sbjct: 422 DIVKNHS---------------FNSPNVPG---------------ELSPKVQLLRQKLIK 451

Query: 716 Y-QHTEDFRAIIFVERVVAALVLPKVFA--ELPSLSF-----VKSASLIGHNNSQEMRTF 767
           Y +H    + I+F ++   A +L  +F+  E+P L       V+S  ++G N S     F
Sbjct: 452 YFEHPTKTKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVRSGDIVGMNVS-----F 506

Query: 768 QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
           + Q   + KFR G +  L ATSVAEEGLDI  CN+V+RFDL  T++ Y+QSRGRAR   S
Sbjct: 507 RQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFDLYNTLIQYVQSRGRARHSSS 566

Query: 827 DYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAV-----P 879
            Y  MIER N  HA  L   R +E+ ++   E +    + H  D+     +D++      
Sbjct: 567 TYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILHGIDS----EIDSILQGEEE 622

Query: 880 GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              + + +TGA ++ +SA+ ++  Y S L  ++ +  +  +++           + C++ 
Sbjct: 623 KRTFIIRATGAKLTYHSALAILARYASSLQYEKETSAQATYVVLPQNN-----SFVCEVI 677

Query: 940 LPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
           LP  +P   L G   S    A+Q+     C  L +     D
Sbjct: 678 LPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKHKLLDD 718



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 254/598 (42%), Gaps = 89/598 (14%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QP++    V   +NLL        ++  + E+ ++   +V + P    I  +P  +   
Sbjct: 966  QQPVLEVELVRLRRNLL--------DKMTDTEKDVETRCFVCIEP--LRISAIPEEIAAS 1015

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------ 1401
                P+I+ R+++ L+A++    ++  V     LEA T  S        Q+         
Sbjct: 1016 CLAFPAIINRLDAYLIALEGCKTLDLSVKPEYALEAFTKDSDNTEEHRVQQIHVQRGMGK 1075

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF++ P   E      R  ++ N  L+  AL K L  Y +
Sbjct: 1076 NYERLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYTR 1135

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F+   W   G+  +   D +         +K  AE K                    
Sbjct: 1136 SRGFSRHTWYPDGLTLLHGRDHR---------KKISAESK-------------------- 1166

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEEVGC---P 1576
                     L  KT+ADV EALIG   + GG  +  +  +K +   V+S   +  C    
Sbjct: 1167 -------HALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADY 1219

Query: 1577 SRPACVPESVLRSVDFHAL------EDALKIKFKDRGLLVEAITHASRPSS--GVSCYQR 1628
            +    +P+   +S D + L      E+ L  +FK   LL  A TH S PS+   V CYQR
Sbjct: 1220 TSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQR 1279

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +    LF+ Y +  P  LT+ + A V+N+    +AVK  LH HLRH S+
Sbjct: 1280 LEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSN 1339

Query: 1689 ALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
             L  QI  + +E+   E    G   + L     PK L D+VE+  GA F+DS     VV 
Sbjct: 1340 PLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVVE 1399

Query: 1748 QVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------ 1796
              FQ         M   +T    HP   LQ R   +     Y   ++G +  V+      
Sbjct: 1400 DFFQRHVKSYFHDMTIYDTFANKHPTTFLQNRLTNEYGCTNY-CLKAGEIPVVDGGTVSV 1458

Query: 1797 ---VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQ 1851
               V +  V +        + A+  A+  AL+VL+    +E +EK   + +   NG+Q
Sbjct: 1459 LAAVIVHEVVIAEGTASSGRYAKVKASEKALSVLENMGPSEFREKYHCDCRT-ANGSQ 1515


>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1568

 Score =  270 bits (690), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 224/694 (32%), Positives = 326/694 (46%), Gaps = 120/694 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQ---NKKMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIA LL+R +I N+L+ +     K +A FLV K
Sbjct: 125 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELENRFQGQPKRIAFFLVDK 184

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+     Y V  +CG+M  D   A+ W+  F     +V T++IL   L HS
Sbjct: 185 VALVFQQHAVLTCNLDYSVAKFCGQM-LDRSSAEFWETTFQENMAIVCTSEILYQCLHHS 243

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+M+ INLLI DECHH  K HPY+ ++ +FY      E RP + GMTASPV+     +Q
Sbjct: 244 YIRMDQINLLIFDECHHTKKNHPYARIIKDFYIQNEDNEARPRILGMTASPVD-----AQ 298

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPS-EVVVEYDKAASLWS--LHEQLKQM 536
           +D  I    LE  L S + T+ D   ++  +  P  E+V+EYD+    W+  LH+ +K +
Sbjct: 299 IDPRIAAAELEGLLHSQIATVSDPTIIQHTISCPKEEIVLEYDRRPRQWTTPLHQSIKAL 358

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                              +G  D   K                            + A 
Sbjct: 359 -------------------VGNHDYFTK-----------------------AFVFTSQAT 376

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSK---K 653
            ELG WCA +  Q F            Q D+   E+   +  SLL+    +GA S+    
Sbjct: 377 AELGPWCADRYWQLFFN----------QEDIAKLETQAER--SLLR----QGAFSQLMGL 420

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
           D   V   +  V+   N   E  +LD+ + S                    KV  L K L
Sbjct: 421 DKNRVREAHELVK---NHEFEQPILDTRLFSS-------------------KVIELWKTL 458

Query: 714 LKYQHTEDF--RAIIFVERVVAALVLPKVFAELPSLSF--VKSASLIG---HNNSQEMRT 766
                ++D   R I+FV++   A +L  +  + P L    ++   LIG   +++S E   
Sbjct: 459 HDQFSSQDLVRRCIVFVKQRNTANILVDLLKQ-PELKIPGLEPGILIGGGRNDSSWESSK 517

Query: 767 FQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
              ++   TI KF+ G +  + ATSVAEEGLDI  CN++IRFDL  T++ YIQSRGRAR+
Sbjct: 518 TSYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNIIIRFDLYDTLIQYIQSRGRARQ 577

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV----- 878
             S YI MIERGN      ++  + SE+ LRK      D   L  T     +D       
Sbjct: 578 EKSTYIHMIERGNSEQLQKMKQLKQSEDGLRKFCEAMPDTRKL--TGNNFKMDYFLRKEK 635

Query: 879 PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               Y V  TGA ++   ++  +  + S LP    + L PE+ +   E  GG   + C++
Sbjct: 636 GQRQYTVPETGAKLNYKQSLICLANFVSSLPHPPETNLTPEYTVNTTE--GG---FQCEV 690

Query: 939 QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
            LP  +P     G V  S  +A+ +     C +L
Sbjct: 691 ILPAISPIRSAIGKVHGSKAVAKCSAAFEMCLQL 724



 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 241/621 (38%), Gaps = 124/621 (19%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGP--LEYSSYADYYK-QKYGVELIFKKQPLIRGR 1302
             ++FY+   R++M      P  EG + P    + +  D +    Y   L  K +   + R
Sbjct: 927  ARKFYLRGRRHDMKPTDPVP--EGIVAPGHRAWRTTCDAHDILNYSNSLWSKSRAKFKSR 984

Query: 1303 G---------VSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            G         +S  +NLL    E        GE +  K  ++ L P    I PLP  +V 
Sbjct: 985  GDQAVVEAELLSTQRNLLDDSLE--------GENLEPKQCFLVLEP--LKISPLPVQVVA 1034

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF----- 1400
             A   P I+ RV+S L+A+   + +   +     LEA T  S         Q  F     
Sbjct: 1035 MAYNFPVIIHRVDSNLVALDACNMLGLNIRPDLALEAFTKDSDNTDEQDVEQVNFQRGMG 1094

Query: 1401 -CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
              YER E LGDA+LK   +  ++   P K E +    R  ++ N  L+  AL   L+ YI
Sbjct: 1095 NNYERLEFLGDAFLKMATTIAIYTLIPDKDEFEYHVERMVLICNRNLFNNALEVKLEEYI 1154

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            ++  F    W   G+                         K G  K              
Sbjct: 1155 RSMAFNRRTWYPEGLTL-----------------------KRGKRK-------------- 1177

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVE----GGKDAA-----------NHLMKWIGI 1564
               D     VL+ K++ADV EA+IG  Y+     G  D A           NH M     
Sbjct: 1178 ---DIRKKHVLADKSIADVCEAIIGAAYLTAQEAGNFDMAIQAVTRMVNDKNHTM----- 1229

Query: 1565 QVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS--G 1622
            Q  SD   V        +P + ++          +  +F+   LL  A  H + P+S   
Sbjct: 1230 QTWSDYYAVYKKPAWQTMPTNSVQEDMAEKFHKRMGYRFQYPRLLRSAFQHPTYPTSWEK 1289

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
            +  YQRLEF+GDA+LD     HLF  +    P  LT+ + A V+N+    +AV    H  
Sbjct: 1290 LPSYQRLEFLGDALLDMACIDHLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYIGFHRS 1349

Query: 1683 LRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG------------DC-KAPKVLGDIVE 1729
            L+H S A+  +I  +V E+ E L      +   G            DC + PK L D +E
Sbjct: 1350 LQHSSPAVQSEIASYVTEIEEALAAAKAAAVQEGKSESNFARDFWVDCSRPPKCLPDTIE 1409

Query: 1730 SIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLP-MHPVRELQERCQQQAEGLEY 1784
            +  GAIF+DS  D   V   F    Q   + M   +T    HPV  L    Q +    E+
Sbjct: 1410 AYVGAIFVDSSYDYQTVQDFFDKHIQFWFEDMRLYDTFANKHPVTFLGHEMQHRFRCQEW 1469

Query: 1785 KASRSGNLATVEVYIDGVQVG 1805
            +      L T E+ +D  + G
Sbjct: 1470 R------LLTREIMVDKDEEG 1484


>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
          Length = 1525

 Score =  270 bits (689), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 220/690 (31%), Positives = 322/690 (46%), Gaps = 124/690 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIAVLL++       ND        +A FLV  
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 177

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      VGH+ G MG D W    W + F    V+V TA+IL   L +S
Sbjct: 178 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 237

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IKM  IN+LI DE HH  K HPY+ ++ + Y      KRP +FGMTASP++ KG     
Sbjct: 238 YIKMSQINILIFDEAHHTKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG----- 292

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK-----AASLWS-LHEQLK 534
           D   +   LE  LDS + T  +   L +    P E V  ++K     A SL+  L ++  
Sbjct: 293 DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDRFG 352

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
            M      A      R  WQ                                        
Sbjct: 353 DM------ACLEGIFRFAWQ---------------------------------------- 366

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           A  ELG+WC+    +++  AL +D               L K         +EG+V +K 
Sbjct: 367 ASSELGRWCS---DRAWARALADD--------------VLPK---------LEGSV-RKT 399

Query: 655 AKVVDSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           A    S N   E    EI    E  E++ S+  S  E            G+++PKVQ L 
Sbjct: 400 ANSETSSN-VPESAYKEILRITEASEIVKSYAFSSPETF----------GQLSPKVQVLR 448

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---R 765
           + L +Y  + TE  + I+F ++   AL+L ++F  L ++ F++   LIG  +        
Sbjct: 449 EELARYFGRQTET-KCIVFTQKRYTALILAELFQTL-NIPFLRPGVLIGVRSGDLAGMNI 506

Query: 766 TFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
           TF+ Q  ++ KFR G +  L ATSVAEEGLDI  CN+V+RFDL +T++ Y+QSRGRAR  
Sbjct: 507 TFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQYVQSRGRARHF 566

Query: 825 GSDYILMIERGNLSHATFLRNARNSE---ETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
            S Y  M+ERGNL H   L   +++E      R    +R       D   ++  D    T
Sbjct: 567 NSTYASMVERGNLEHEQRLLEVQDAEMMQSFCRTLPEDRLLYGFDHDLDTVLQKDEGNRT 626

Query: 882 VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE--YSCKLQ 939
            ++++STGA ++ +SA  ++  Y S L  ++    +  +++        P    + C++ 
Sbjct: 627 -FRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVV-------LPINGAFVCEVI 678

Query: 940 LPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           LP  +P   L G       +A+++     C
Sbjct: 679 LPEKSPIRGLTGSPAMKKSIAKRSAAFDTC 708



 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 158/591 (26%), Positives = 254/591 (42%), Gaps = 102/591 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL        ++  + E  ++   ++ + P    +  +P S     
Sbjct: 969  QPVLRAELVRLRRNLL--------DKMTDTERDVETRCFICIEP--LKVSAIPASTAFSC 1018

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+++ L+++Q  + +N+ V     LEA T  S        Q+          
Sbjct: 1019 LAFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGRN 1078

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1079 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1138

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                         KL   K+++            +
Sbjct: 1139 RGFSRHTWYPEGL-------------------------KLLQGKDHSR-----------K 1162

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA- 1580
              + S   L+ KT+ADV EALIG   + GG D          + V++    V  PS  A 
Sbjct: 1163 ATTESKHALAEKTIADVCEALIGAALLSGGPDHR------FDMAVKAVTTLVNSPSHKAE 1216

Query: 1581 ---------CVPESVLRSVD------FHALEDALKIKFKDRGLLVEAITHASRPSS--GV 1623
                      +P+   R+ D         +E+ L  +F+   LL  A TH S PS+   V
Sbjct: 1217 RWKDYISFYTIPKYQRRAADGAELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKV 1276

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GD+++D +  + LF  + +  P  LT+ + A V+N+    +AVK  LH HL
Sbjct: 1277 PCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHL 1336

Query: 1684 RHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
            ++ S+ L  QI  + +E+   E    G   +       PK L D+VE+  GA+F+DS  +
Sbjct: 1337 KYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSDFN 1396

Query: 1743 TSVVWQVF----QPLLDPMVTPETLP-MHPVRELQER----------CQQQAEGLEYKAS 1787
              V+ + F    +P  + M   +T    HP   L  R          C +  E      +
Sbjct: 1397 FEVIERFFRDYIKPFFEDMAIYDTFANKHPTTFLHNRLTNEFGCVNYCLKAGEMPSIDGA 1456

Query: 1788 RSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
             +G LA V V+   +  G A +   + A+  A+  ALAVL E  +AE + K
Sbjct: 1457 PAGVLAAVIVHDVVIAEGTATS--GRYAKVKASEKALAVLDEISSAEFQRK 1505


>gi|302322012|gb|ADL16850.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322072|gb|ADL16880.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  269 bits (688), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 149/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDT DG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTXDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|302322202|gb|ADL16945.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322208|gb|ADL16948.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  269 bits (687), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 149/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALI VYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIXVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|302322070|gb|ADL16879.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322088|gb|ADL16888.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  268 bits (686), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 149/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDT DG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTIDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALIGVYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|19072786|gb|AAL84638.1|AF484524_1 endoribonuclease Dicer [Mus musculus x Mus spretus]
          Length = 1539

 Score =  268 bits (686), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 29   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 86

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 87   ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 146

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 147  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 203

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 204  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 261

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 262  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 297

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 298  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 357

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 358  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 417

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 418  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 477

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 478  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 537

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 538  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 597

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 598  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 653

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 654  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 710

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 711  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 745



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 928  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 980

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 981  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1037

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1038 LPSILYRLHCLLTAEELR 1055



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  Y   HEG+L+ MR + VSN  L
Sbjct: 1281 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVSNCNL 1340

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1341 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1370



 Score = 49.7 bits (117), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1279 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYHDAHEGRLSYMRSKKVS 1336

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1337 NCNLYRLGKKKGL 1349


>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
 gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
          Length = 1906

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 153  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 210  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 267

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 268  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 303

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 304  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 363

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 364  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 423

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 424  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 483

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 484  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 543

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 544  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 603

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 604  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 659

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 660  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 716

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 717  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 751



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1428 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1484

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1485 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1542

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1602

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1603 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1662

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1663 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1722

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1723 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1782

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1783 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1842

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1843 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1900



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1376



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1285 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1342

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1343 NCNLYRLGKKKGL 1355



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1628 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1675

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1676 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1735

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1736 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1768

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1769 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1808


>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
          Length = 1908

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 37   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 94

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 95   ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 154

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 155  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 211

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 212  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 269

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 270  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 305

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 306  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 365

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 366  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 425

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 426  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 485

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 486  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 545

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 546  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 605

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 606  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 661

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 662  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 718

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 719  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 753



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1430 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1486

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1487 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1544

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1545 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1604

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1605 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1664

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1665 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1724

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1725 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1784

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1785 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1844

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1845 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1902



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 936  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 988

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 989  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1045

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1046 LPSILYRLHCLLTAEELR 1063



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1289 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1348

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1349 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1378



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1287 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1344

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1345 NCNLYRLGKKKGL 1357



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1630 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1677

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1678 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1737

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1738 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1770

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1771 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1810


>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
          Length = 1917

 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 46   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 103

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 104  ANQVCQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 163

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 164  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 220

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 221  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 278

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 279  LD-------------FINDCNVAVYSKERDSTLISKQILSDCRAVLVV-----------L 314

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 315  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 374

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 375  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 434

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 435  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 494

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 495  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 554

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 555  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 614

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 615  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 670

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 671  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 727

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 728  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 762



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1439 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1495

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1496 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1553

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1554 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1613

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1614 LSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1673

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1674 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1733

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1734 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1793

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1794 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1853

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1854 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1911



 Score = 80.5 bits (197), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1387



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1639 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1686

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1687 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1746

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1747 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1779

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1780 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1819


>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
          Length = 1907

 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 222/754 (29%), Positives = 362/754 (48%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL  + K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 153  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 210  E--EKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTDRSGLYERL-LMEL-- 264

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 265  EEAIN---------FINDCNVSVHSKERDSTLISKQILSDCRAVLVV-----------LG 304

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K   
Sbjct: 305  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEHFSPASLDLKYVT 364

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 365  PKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNF 424

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQM 769
                T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ QM
Sbjct: 425  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQM 484

Query: 770  Q-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            +       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 485  EAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 544

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   D  P  
Sbjct: 545  APISNYVMLADTDKIQSFEEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPPY 604

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 605  VLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTQELPDG-TFYS-TLYLP 660

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP    +RLA++ V L  C+KLH++G   + L+P    G++  K ++  +
Sbjct: 661  INSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEELD 717

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 718  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 751



 Score =  170 bits (431), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 224/486 (46%), Gaps = 88/486 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         Q + ++++   A  K +     +   +   W  P     G +P
Sbjct: 1428 FLEYDQEH--------IQFIDSMLMGSGAFVKKISLSPFSTSDSAYEWKMPKKSSLGSMP 1479

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1480 -FSSDLEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1537

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--------------------- 1566
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V                     
Sbjct: 1538 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFS 1597

Query: 1567 -------------ESDPE-------EVGCPSRPA-CV-----PESVLRSV--DFHALEDA 1598
                          + P        E GC   P  C+      E  L  +   F   E  
Sbjct: 1598 SQQKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKK 1657

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1658 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1717

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL + 
Sbjct: 1718 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRS 1777

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  
Sbjct: 1778 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRS 1837

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1838 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1895

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1896 SLKANQ 1901



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 18/146 (12%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKS---VAEDKLG 1502
            Y+    KGL S +    F  P  W  PG   V ++D  + +    D+      +A  KLG
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNAEKWEKDEMTKDCLLANGKLG 1404

Query: 1503 TD------------KNYNEYEDDDME 1516
             D            K   EYEDD +E
Sbjct: 1405 KDCEEEEALTWRAPKEEAEYEDDFLE 1430



 Score = 80.5 bits (197), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1285 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1342

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1343 NCNLYRLGKKKGL 1355



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1629 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1676

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1677 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1736

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1737 YDYHKYFKA 1745


>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
          Length = 1916

 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 220  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 277

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 278  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 313

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 314  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 373

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 374  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 433

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 434  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 494  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 554  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 669

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 670  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 726

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 761



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1438 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1494

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1495 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1552

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1612

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1613 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1672

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1673 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1732

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1733 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1792

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1793 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1852

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1853 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1910



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1386



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1638 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1685

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1686 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1745

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1746 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1778

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1779 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1818


>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
            Full=Double-strand-specific ribonuclease mDCR-1
          Length = 1916

 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 362/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 220  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 277

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 278  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 313

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 314  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 373

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 374  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 433

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 434  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 493

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 494  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   DA P 
Sbjct: 554  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDAFPP 613

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 614  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 669

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 670  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 726

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 761



 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 153/480 (31%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1438 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1494

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1495 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1552

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1553 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1612

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1613 LSGSCAAPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1672

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1673 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1732

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1733 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1792

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1793 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1852

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1853 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1910



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1386



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1638 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1685

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1686 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1745

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1746 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1778

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1779 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1818


>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
 gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
 gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
          Length = 1917

 Score =  268 bits (684), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 222/754 (29%), Positives = 362/754 (48%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL  + K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPRAKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEAIN---------FINDCNVSVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEHFSPASLDLKYVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQM 769
                T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ QM
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQM 494

Query: 770  Q-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            +       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   D  P  
Sbjct: 555  APISNYVMLADTDKIQSFEEDLKTYKAIEKILRNKCSKSVDGAEADVDAVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G ++ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPK--CRTQELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP    +RLA++ V L  C+KLH++G   + L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 761



 Score =  170 bits (431), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 224/486 (46%), Gaps = 88/486 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         Q + ++++   A  K +     +   +   W  P     G +P
Sbjct: 1438 FLEYDQEH--------IQFIDSMLMGSGAFVKKISLSPFSTSDSAYEWKMPKKSSLGSMP 1489

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1490 -FSSDLEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1547

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--------------------- 1566
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V                     
Sbjct: 1548 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALYPAQENFS 1607

Query: 1567 -------------ESDPE-------EVGCPSRPA-CV-----PESVLRSV--DFHALEDA 1598
                          + P        E GC   P  C+      E  L  +   F   E  
Sbjct: 1608 SQQKSLSGSCAATAASPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKK 1667

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1668 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1727

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL + 
Sbjct: 1728 TDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRS 1787

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  
Sbjct: 1788 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRS 1847

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1848 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1905

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1906 SLKANQ 1911



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 75/146 (51%), Gaps = 18/146 (12%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKS---VAEDKLG 1502
            Y+    KGL S +    F  P  W  PG   V ++D  + +    D+      +A  KLG
Sbjct: 1357 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNAEKWEKDEMTKDCLLANGKLG 1414

Query: 1503 TD------------KNYNEYEDDDME 1516
             D            K   EYEDD +E
Sbjct: 1415 KDCEEEEALTWRAPKEEAEYEDDFLE 1440



 Score = 80.5 bits (197), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKKGL 1365



 Score = 48.5 bits (114), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1639 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1686

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1687 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1746

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1747 YDYHKYFKA 1755


>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
 gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
          Length = 1921

 Score =  267 bits (683), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 224/757 (29%), Positives = 358/757 (47%), Gaps = 77/757 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALYVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLPLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYEKL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +      L     +S++  SD  A L+            LG
Sbjct: 275  EEA---------LNFINDCNISVHSTL-----ISKQILSDCRAVLVV-----------LG 309

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 310  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 369

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 370  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 429

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 430  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 489

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 490  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 549

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRK---EAIERTDLSHLKDTSRLISVDAV 878
             P S+YI++ +   + S    L+  +  E+ LR    +++E  +             D  
Sbjct: 550  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVETGETDIDPVVDDDDDDDIF 609

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L
Sbjct: 610  PPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TL 665

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++
Sbjct: 666  YLPINSPLRASIIGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEE 722

Query: 998  NDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
              +            PG+ + R+ YP+ + + L+  +
Sbjct: 723  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 759



 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 226/488 (46%), Gaps = 90/488 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1440 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTNDSAYEWKMPKKSSLGSMP 1491

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1492 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1549

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1550 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFS 1609

Query: 1579 -----------------------------------PACV-----PESVLRSV--DFHALE 1596
                                               P C+      +  L  +   F   E
Sbjct: 1610 SQQKNLSVSCAAAAAVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFE 1669

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
              +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG
Sbjct: 1670 KKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPG 1729

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELL 1706
             LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL 
Sbjct: 1730 VLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELR 1789

Query: 1707 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLP 1764
            +   +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P
Sbjct: 1790 RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVP 1849

Query: 1765 MHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
              PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR A
Sbjct: 1850 RSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRA 1907

Query: 1824 LAVLKEKE 1831
            L  LK  +
Sbjct: 1908 LRSLKANQ 1915



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 942  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 994

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 995  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1051

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1052 LPSILYRLHCLLTAEELR 1069



 Score = 77.4 bits (189), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1295 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1354

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   + ++D  + D
Sbjct: 1355 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTD 1393



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1293 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1350

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1351 NCNLYRLGKKKGL 1363



 Score = 48.5 bits (114), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1751 YDYHKYFKA 1759


>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
 gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
 gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
          Length = 1918

 Score =  267 bits (683), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 223/754 (29%), Positives = 361/754 (47%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLSPHAKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMK---LCDSCPSCPRILGLTASILNGKCDPDEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+  
Sbjct: 220  E--EKIQKLEKILKSGAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL-- 274

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            EEA           F+   +     + R    +S++  SD  A L+            LG
Sbjct: 275  EEA---------LDFINDCNVSVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQM 769
                T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ QM
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQM 494

Query: 770  Q-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            +       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   D  P  
Sbjct: 555  APISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDGAEADVHAVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP    +RLA++ V L  C+KLH++G   + L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 761



 Score =  167 bits (422), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 205/438 (46%), Gaps = 79/438 (18%)

Query: 1469 WAAP-----GVLPVFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---D 1514
            W  P     G +P F  D +D D S        D  K+V ED       +N  E++   D
Sbjct: 1479 WKMPKKASLGSVP-FSSDLEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVD 1536

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-------- 1566
                 +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V        
Sbjct: 1537 TGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTS 1596

Query: 1567 ---------------ESDPE-----------------EVGCPSRPA-CV-----PESVLR 1588
                           +  P                  E GC   P  C+      E  L 
Sbjct: 1597 RDKASYPAQENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLN 1656

Query: 1589 SV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
             +   F   E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL
Sbjct: 1657 HLISGFENFEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHL 1716

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-- 1703
            +       PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE  
Sbjct: 1717 YEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKN 1776

Query: 1704 -------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDP 1756
                   EL +   +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P
Sbjct: 1777 EMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRP 1836

Query: 1757 MVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKK 1813
            ++      +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   +
Sbjct: 1837 LIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YR 1894

Query: 1814 MAQKLAARNALAVLKEKE 1831
            +A+  AAR AL  LK  +
Sbjct: 1895 IAKSAAARRALRSLKANQ 1912



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 20/148 (13%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1297 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1356

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKS---VAEDKLG 1502
            Y+    +GL S +    F  P  W  PG   V ++D  + +    D+      +A  KLG
Sbjct: 1357 YRLGKKQGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNSEKWEKDEMTKDCLLANGKLG 1414

Query: 1503 TD--------------KNYNEYEDDDME 1516
             D              K   EYEDD +E
Sbjct: 1415 EDCEEEEEEELAWRAPKEEAEYEDDLLE 1442



 Score = 50.8 bits (120), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1295 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1352

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1353 NCNLYRLGKKQGL 1365



 Score = 48.5 bits (114), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1640 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYIFKNKAYLLQAFTHAS 1687

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1688 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1747

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1748 YDYHKYFKA 1756


>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
            [Ailuropoda melanoleuca]
          Length = 1931

 Score =  267 bits (683), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 218/754 (28%), Positives = 350/754 (46%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKEKWSQEFMKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+          
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLY---------- 267

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                          F+   +     + R    +S++  SD  A L+            LG
Sbjct: 268  --GRLLLELEEALNFINDCNIPVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  167 bits (424), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 226/494 (45%), Gaps = 95/494 (19%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P   P+    
Sbjct: 1443 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSPLGSMP 1494

Query: 1478 FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYR 1528
            F  D +D D S        D  K+V ED       +N  E++   D     +  D  + +
Sbjct: 1495 FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQ 1553

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR----- 1578
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R     
Sbjct: 1554 CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSS 1613

Query: 1579 ----------PACVP---ESVLRSVD---------------------------FHALEDA 1598
                      PA       SVL+ ++                           F   E  
Sbjct: 1614 QQKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKK 1673

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1674 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1733

Query: 1658 TDLRAAAVNNENFARVAVKHK--------LHVHLRHGSSALDRQIRDFVKEVLE------ 1703
            TDLR+A VNN  FA +AV            H + +  S  L   I DFV+  LE      
Sbjct: 1734 TDLRSALVNNTIFASLAVXXXXXXXXXXDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQG 1793

Query: 1704 ---ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT- 1759
               EL +   +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++  
Sbjct: 1794 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEK 1853

Query: 1760 -PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQK 1817
                +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+ 
Sbjct: 1854 FSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKS 1911

Query: 1818 LAARNALAVLKEKE 1831
             AAR AL  LK  +
Sbjct: 1912 AAARRALRSLKANQ 1925



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1396



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366



 Score = 47.4 bits (111), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 36/220 (16%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1645 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1692

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1693 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVX 1752

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                     D     +  +P +  V D      D   F  EK             NE + 
Sbjct: 1753 XXXXXXXXXDYHKYFKAVSPELFHVID------DFVQFQLEK-------------NEMQG 1793

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1794 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1833


>gi|302322200|gb|ADL16944.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322210|gb|ADL16949.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
 gi|302322214|gb|ADL16951.1| At1g01040-like protein [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  267 bits (682), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 133/175 (76%), Positives = 149/175 (85%), Gaps = 5/175 (2%)

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            SR+LFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PV
Sbjct: 1    SRYLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPV 60

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
            FDEDTKDG SS FD+E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLAD
Sbjct: 61   FDEDTKDGGSSFFDEEQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLAD 115

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF 1592
            VVEALI VYYVEGGK AANHLMKWIGI VE DP+EV    +   VPESVL+S+DF
Sbjct: 116  VVEALICVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTVKNVNVPESVLKSIDF 170


>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
          Length = 1906

 Score =  266 bits (680), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 220/755 (29%), Positives = 361/755 (47%), Gaps = 71/755 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 35   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 92

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 93   ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 152

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 153  YLSLPDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 209

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-KQMEVA 539
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+L  ++E A
Sbjct: 210  E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 267

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
            ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 268  LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 303

Query: 600  GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK-- 653
            G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L +      ++  K  
Sbjct: 304  GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYV 363

Query: 654  DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
              KV+       +    E ++ E ++ +     ++      +   D     + +   +  
Sbjct: 364  TPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETN 423

Query: 714  LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-NSQEMRTFQ 768
                 T     IIFVER   A+VL ++  E     P L+++ S  + GH     + R+ Q
Sbjct: 424  FPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQ 483

Query: 769  MQ-------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            M+       E + KFR     LL+ATSV EEG+DI +CN+V+RFDL     +Y+QS+GRA
Sbjct: 484  MEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 543

Query: 822  RKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            R P S+Y+++ +   + S    L+  +  E+ LR +  +  D +     + +   D  P 
Sbjct: 544  RAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSADGAEADVHAGVDDEDTFPP 603

Query: 881  TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L L
Sbjct: 604  YVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYL 659

Query: 941  PCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            P N+P    + GP   S+RLA++ V L  C+KLH++G   + L+P    G++  K ++  
Sbjct: 660  PINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMP---VGKETVKYEEEL 716

Query: 1000 EGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +            PG+ + R+ YP+ + + L+  +
Sbjct: 717  DLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 751



 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 225/480 (46%), Gaps = 77/480 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 1428 FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 1484

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1485 EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 1542

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------DPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 1543 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 1602

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 1603 LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 1662

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 1663 NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 1722

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 1723 LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 1782

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 1783 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 1842

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + AE    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1843 EMEPETAEFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1900



 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E         ++A+YYK KY ++L    QPL+     S  
Sbjct: 934  RFYVADVYTDLTPLSKFPSPEC-------ETFAEYYKTKYNLDLTNLNQPLLDVDHASSR 986

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 987  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1043

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1044 LPSILYRLHCLLTAEELR 1061



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1287 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1346

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 1347 YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 1376



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1285 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1342

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1343 NCNLYRLGKKKGL 1355



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1628 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1675

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1676 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1735

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1736 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1768

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1769 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1808


>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
          Length = 1502

 Score =  266 bits (680), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 212/712 (29%), Positives = 337/712 (47%), Gaps = 124/712 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK  N IA L+TG+GKT IAVLL++ +      D    N   ++ FLV  
Sbjct: 91  REYQLELFEKAKAANIIAVLDTGSGKTFIAVLLLKHVIQSELADRASGNPPRISFFLVDS 150

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W  + W++ F    ++V TA++L   L  S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRS 210

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+ME INLLI DE HHA K+HPY+ ++ +FY      +KRP +FGMTASPV+ K     
Sbjct: 211 FIRMEQINLLIFDEAHHAKKEHPYARIVKDFYLRRPEAQKRPKIFGMTASPVDAK----- 265

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
           VD A    NLE+ LDS + T  ++  L + +  P+E +  YDK                 
Sbjct: 266 VDVAKAAKNLETLLDSQIATASNQDVLRQAIARPTEQIWVYDK----------------- 308

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
                 ++S    ++ M +R  G   EL +++  +    S                   L
Sbjct: 309 ----LDATSETDLYKCMQSR-FGKIRELEKIFFYALEASS------------------ML 345

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--DAKV 657
           G+WC                 +++      + + L K         +EG VSK    +  
Sbjct: 346 GRWC-----------------SDWLWTFALEAAELPK---------LEGRVSKSYMQSSS 379

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKY 716
            D   G  E      E G+L+ +H       VD           ++ KV+ L   L L +
Sbjct: 380 RDHSKGLDEAIRLLREAGQLIRNHTFDTP--VD-------CPAHLSSKVRLLRHELSLYF 430

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQE---T 772
           +   D + I+FV++   A +L ++F+ + +   +++  LIG  ++      F  ++   T
Sbjct: 431 ERHTDTKCIVFVQQRHTARLLAELFSRIGT-RHMQTGILIGVQHDGIGGANFSFRQQFLT 489

Query: 773 IAKFRDGRVTLL--VATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS---- 826
           + KFR G +  L   ATSVAEEGLDI  CN++IRFDL+ T++ YIQSRGRAR   S    
Sbjct: 490 LLKFRKGELNCLEQFATSVAEEGLDIPDCNLIIRFDLSLTMIQYIQSRGRARHSNSIVWL 549

Query: 827 -------------DYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSR 871
                         Y  M+ERGNL HA+ ++ A+ +E  +R+  EA+    +  ++ +S 
Sbjct: 550 SLYDSECLANGTLQYAHMVERGNLIHASCIQEAQRAEHIMRRFCEALPEDRI--IRGSSD 607

Query: 872 LISVDAVPGTVYQ---VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
            + ++      Y+   V STGA ++  S++ ++  Y S L  ++ +  +  + +ER +  
Sbjct: 608 DLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETSPQVNYFIERID-- 665

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
              + + C+  LP  +PF  L G   +    A+Q+     C  L + G   D
Sbjct: 666 ---SAFVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDD 714



 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 217/488 (44%), Gaps = 77/488 (15%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP++R   V   +NLL    + + EQE  GEE     YY+   PE   I  LP  +   
Sbjct: 966  KQPVVRAELVRLRRNLL----DRATEQE-RGEET---AYYIC--PEPLRISALPPPVAAF 1015

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  DK+   +     LEALT  S         Q  F      
Sbjct: 1016 AFAFPAIISRIESYLISLEACDKLQLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGK 1075

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +++
Sbjct: 1076 NYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVR 1135

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                         KL   K  +E           
Sbjct: 1136 TQGFSRRNWYPEGI-------------------------KLLQGKAKSE----------- 1159

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA-NHLMKWIGIQVESDPEEVGCPSRP 1579
               + + + L  KT+AD+ EALIG   + GGK    +  +K + + V+SD   V   +  
Sbjct: 1160 --SAQNKQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSY 1217

Query: 1580 A---CVPESVLRSVDFHALEDALKI------KFKDRGLLVEAITHASRPS--SGVSCYQR 1628
                 +P   +   D   L+ A +I       F    LL  A THAS PS  S V CYQR
Sbjct: 1218 IDLYSLPSYQIAQADAGQLDLAKQIGNRLGYYFTYPRLLRSAFTHASYPSAWSTVPCYQR 1277

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  +HL+  Y +  P  LT+ + A V+N+    VAVK  LH HL + S+
Sbjct: 1278 LEFLGDSLLDMVCVEHLYHHYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHKHLLYISN 1337

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKA--PKVLGDIVESIAGAIFLDSGRDTSVV 1746
            AL  QI  + +E+ E  +    +S       +  PK L D++E+  GAIF+DS     VV
Sbjct: 1338 ALFGQITRYAEEI-EVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1396

Query: 1747 WQVFQPLL 1754
               FQ  L
Sbjct: 1397 EDFFQRYL 1404


>gi|410962933|ref|XP_003988023.1| PREDICTED: endoribonuclease Dicer [Felis catus]
          Length = 1893

 Score =  266 bits (679), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 218/754 (28%), Positives = 352/754 (46%), Gaps = 69/754 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 46   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKR--TVFLVNS 103

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V  Q   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 104  ANQVAPQVSAVRTHSDLKVGEYSSLEVNAAWTKEKWNQEFTKHQVLVMTCYVALNVLKNG 163

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 164  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 220

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+ +L       
Sbjct: 221  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLLELEEA 278

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                          F+   +   + + R    +S++  SD  A L+            LG
Sbjct: 279  L------------NFINDCNISVRSKERDSTSISKQILSDCRAVLVV-----------LG 315

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 316  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 375

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 376  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 435

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 436  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 495

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 496  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 555

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 556  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDAGETDVEPVVDDDDVFPPY 615

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 616  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 671

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 672  INSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 728

Query: 1001 GEPL--------PGTARHREFYPEGVADILQGEW 1026
                        PG+ + R+ YP+ + + L+  +
Sbjct: 729  LHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 762



 Score = 90.5 bits (223), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 194/480 (40%), Gaps = 106/480 (22%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1444 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPLSATDSAYEWKMPKKSSLGSMP 1495

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1496 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1553

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRP--- 1579
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1554 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPARENFN 1613

Query: 1580 ---------------ACVPESVLRSVDFHAL---------------------------ED 1597
                           A    SVL+ +++  L                           E 
Sbjct: 1614 SQQKALSGSRAAASVAGPRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1673

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
             +  +FK++  L++A THAS        Y      G         +  F +Y        
Sbjct: 1674 KINYRFKNKAYLLQAFTHAS--------YHYNTITG--------REGGFLAY-------W 1710

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLR-HGSSALDRQIRDFVKEVLEE--LLKPGFNSFG 1714
               R A V  E   R A ++ L    R  G+ A       +    L E  L +   +   
Sbjct: 1711 LASRVAVVTQEWRGRAA-EYTLRSGARARGARAKSTLCESYTGAELGEHGLRRSEEDEEK 1769

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  PVREL 
Sbjct: 1770 EEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELL 1829

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1830 EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1887



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1397



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1297 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1354

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1355 NCNLYRLGKKKGL 1367


>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
          Length = 1924

 Score =  266 bits (679), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 225/757 (29%), Positives = 354/757 (46%), Gaps = 73/757 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ------RQNKKMLAVFLV 358
            R YQ+++LE A   NTI  L TG+GKT IA   +   C  L       R  K+   VFLV
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIASTTLLKSCLYLDLGETSARNGKR--TVFLV 102

Query: 359  PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                 V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + LN+L+
Sbjct: 103  NSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLK 162

Query: 419  HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            +  + +  INLL+ DECH A+  HPY   M       S    P + G+TAS +N  G   
Sbjct: 163  NGYLSLSDINLLVFDECHLAILDHPYREFMKLCEICPSC---PRILGLTASILN--GKWD 217

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
              D   K   LE  L S   T  D   L+++   P E+VV+         L+E+L  ME+
Sbjct: 218  PEDLEEKFQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERL-LMEL 276

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
              EEA           F+   +     + R    +S++  SD  A L+            
Sbjct: 277  --EEALN---------FINDCNISVHSKERDSTLISKQILSDCRAVLVV----------- 314

Query: 599  LGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK- 653
            LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K 
Sbjct: 315  LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKF 374

Query: 654  -DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
               KV+       +    E    E ++ +     ++      +   D     + +   + 
Sbjct: 375  VTPKVIKLLEILRKYKPYERHSFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPET 434

Query: 713  LLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NN 760
                  T     IIFVER   A+VL ++  E     P L+++ S  + GH        NN
Sbjct: 435  NFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNN 494

Query: 761  SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
            + E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GR
Sbjct: 495  TMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR 554

Query: 821  ARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV- 878
            AR P S+YI++ +   + S    L+  +  E+ LR +  +  D     D   ++  D V 
Sbjct: 555  ARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGE-TDIDPVMDDDHVF 613

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L
Sbjct: 614  PPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TL 669

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++
Sbjct: 670  YLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEE 726

Query: 998  NDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
              +            PG+ + R+ YP+ + + L+  +
Sbjct: 727  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 763



 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1444 FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1495

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1496 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1553

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 1554 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 1613

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1614 SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1673

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1674 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1733

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1734 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1793

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 1794 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 1853

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1854 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1911

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1912 RSLKANQ 1918



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 946  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 998

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 999  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1055

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1056 LPSILYRLHCLLTAEELR 1073



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1397



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1297 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1354

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1355 NCNLYRLGKKKGL 1367



 Score = 48.9 bits (115), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1646 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1693

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1694 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1753

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 1754 YDYHKYFKA 1762


>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
 gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
 gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
          Length = 1921

 Score =  266 bits (679), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 218/765 (28%), Positives = 359/765 (46%), Gaps = 91/765 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y      + W  ++W +EF   QVLVMT  + L +LR+ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNE 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLK---- 474
             + +  INLL+ DECH A++ HPY  +M   E Y +      P + G+TAS +N K    
Sbjct: 163  YLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSC-----PRILGLTASILNGKCDPA 217

Query: 475  --GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSL 529
                  +    I   N E+  D VV        L+++   P E+VV+   Y   + L+  
Sbjct: 218  ELEEKIKKLEKILKSNAETATDLVV--------LDRYTSQPCEIVVDCGPYTDKSGLYG- 268

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
               L++++ A+              F+   +     + R    +S++  SD  A L+   
Sbjct: 269  -RLLRELDEAL-------------HFLNDCNISVHSKERDSTLISKQILSDCRAVLVV-- 312

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCEL 645
                     LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +   
Sbjct: 313  ---------LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF 363

Query: 646  VEGAVSKK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
               ++  K    KV+       +    E ++ E ++ +     ++      +   D    
Sbjct: 364  SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEE 423

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH- 758
             + +   +       T     IIFVER   A+VL ++  E     P L+++ S  + GH 
Sbjct: 424  IEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHG 483

Query: 759  -------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
                   N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL    
Sbjct: 484  IGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEY 543

Query: 812  LAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTS 870
             +Y+QS+GRAR P S+YI++ +   + S    L+  +  E+ LR +  +  D S  +   
Sbjct: 544  RSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETETEP 603

Query: 871  RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
             +   D  P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P  
Sbjct: 604  IVDDDDVFPPYVLRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDH 661

Query: 931  PTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG 989
             T YS  L LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G
Sbjct: 662  -TFYS-TLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VG 716

Query: 990  EQQEKVDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            ++  K ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 717  KETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  168 bits (426), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/440 (31%), Positives = 206/440 (46%), Gaps = 81/440 (18%)

Query: 1469 WAAP-----GVLPVFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---D 1514
            W AP     G +P F  D  D D S        D  K+V ED       +N  E++   D
Sbjct: 1480 WKAPKKSSLGNVP-FSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVD 1537

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESD 1569
                 +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V     ++D
Sbjct: 1538 AGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTD 1597

Query: 1570 PEEVGCP---------------SRPACV-------------------PESVLRSVD---- 1591
             E   C                S  AC+                   P  +    D    
Sbjct: 1598 WESTLCATGENCNSEQKNLSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKT 1657

Query: 1592 -------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITK 1643
                   F   E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITK
Sbjct: 1658 LNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITK 1717

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
            HL+       PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  +E
Sbjct: 1718 HLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQME 1777

Query: 1704 ---------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
                     EL +   +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++
Sbjct: 1778 KNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMM 1837

Query: 1755 DPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQ 1811
             P++      +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++  
Sbjct: 1838 RPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS-- 1895

Query: 1812 KKMAQKLAARNALAVLKEKE 1831
             ++A+  AAR AL  LK  +
Sbjct: 1896 YRIAKSAAARRALRSLKANQ 1915



 Score = 80.9 bits (198), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 19/161 (11%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KGL S +    F  P  W  PG   + ++D  + D   +++E++  E+ L   K
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTDK--WEKEETTKENLLANGK 1413

Query: 1506 NYNEY--------------EDDDMEDGELEGDSSSYRVLSS 1532
               +               E+ D ED  LE D    + + S
Sbjct: 1414 LDYDDDDEEDEDLMWRLPKEETDFEDDFLEYDQEHIKFIDS 1454



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 64/230 (27%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D                             ++  
Sbjct: 1751 YDYHKYFKA--------VSPELFHVID-----------------------------DFVQ 1773

Query: 1513 DDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
              ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1774 FQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1823



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366


>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
 gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
          Length = 1521

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 209/693 (30%), Positives = 327/693 (47%), Gaps = 103/693 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK+KN IA L+TG+GKTLIAVLL++ +      D        ++ FLV  
Sbjct: 114 REYQLELFEKAKEKNIIAVLDTGSGKTLIAVLLLKHVIEQELADRSLGRPPRISFFLVDS 173

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W+ + W+  F    V+V TA++L   L HS
Sbjct: 174 VTLVYQQAAVLQNNIAQKMDKFCGAMRTDLWNKEVWEGHFKKNMVIVCTAEVLHQCLLHS 233

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I++  INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K    QV
Sbjct: 234 FIRISQINLLIFDEAHHAKKEHPYARIIKDFY-MREPERKPKIFGMTASPVDAK---VQV 289

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
             A K   LE+ LDS + T  +   L + V  P E + EYD+             +E+  
Sbjct: 290 VSAAK--TLETMLDSQIATASNPSLLRQSVARPREEIWEYDR-------------LELPF 334

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E    S   R   QF      G  + L +++  S  T S                   LG
Sbjct: 335 ETPLHSQLCR---QF------GDIKVLEKIFKFSFETSS------------------ALG 367

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            WC+             D   +Y L+    E  L K+ +     +++   S+ D    D 
Sbjct: 368 SWCS-------------DWVWSYCLN----EETLPKLEARSNKPIMKNLPSEPDR---DR 407

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK--ILLKYQH 718
           E   +      + + E                 G  V + ++      L+K  +L +++ 
Sbjct: 408 ETERIRAAGAIVRDHEF----------------GDPVTNPRLLSPKVQLLKNELLRRFKE 451

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM----RTFQMQ-ETI 773
             D R I+F  +   A +L  +F ++ S  +++   L+G  +  +      +F+ Q   +
Sbjct: 452 NPDTRCIVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDRIGLDTSFREQFLNV 510

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             FR G +  L ATSVAEEGLDI+ CN+++RFDL  T++ YIQSRGRAR   S ++ M+E
Sbjct: 511 IAFRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHIESTFVHMVE 570

Query: 834 RGNLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
           R NL H + +   R +EE L    K   E   L  + D   ++  D    + Y ++STGA
Sbjct: 571 RNNLIHESVVEEVRRAEEILVRFCKSLPENRLLKGMDDIDSILEKDRQRKS-YTIKSTGA 629

Query: 891 VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLE 950
            ++  S++ ++  Y S L  ++    +  +++  H K G    + C+  LP  +P     
Sbjct: 630 KLTYPSSLAVLAHYASSLQYEKELSAQVSYVI--HVKDGA---FICEAILPEKSPVRGCM 684

Query: 951 GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
           G   S   LA+Q+     C  L + G   +  +
Sbjct: 685 GKPASRKLLAKQSAAFETCLILRKNGLLDNYFI 717



 Score =  154 bits (388), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 246/588 (41%), Gaps = 102/588 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   +   +N L    +  E ++G   +     YY+    E   I  +P  +    
Sbjct: 965  QPVLRAELIQLRRNFL----DIDENKKGPPVD-----YYIC--AEALKISSIPMPVATLI 1013

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+++ R+ES L+A++  +K+   +     LEALT  S         Q  F       
Sbjct: 1014 FVFPAMISRMESYLIALEACEKLQLKISPELALEALTKDSENTEEHGLEQIRFQSGMGKN 1073

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  YI++
Sbjct: 1074 YERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMLLICNQNLFNNAIILEVFKYIRS 1133

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +  +D K                                     E
Sbjct: 1134 KSFSRRGWYPEGLTLLKGKDKK-------------------------------------E 1156

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVGCPSRPA 1580
                    L+ K++ADV EALIG   + GG D    +  K + I V SD   V       
Sbjct: 1157 NPGGPTHALADKSIADVCEALIGASLLAGGPDHKFDMATKAVTIFVNSDDHRVE-----R 1211

Query: 1581 CVPESVLRSVDF--------------HALEDALKIKFKDRGLLVEAITHASRPS--SGVS 1624
                S L S+                + +E+ L  +FK   LL  A  H S PS  + V 
Sbjct: 1212 WADYSTLYSLTTYQTAAATASEADVANQIEEKLGYRFKYPKLLRSAFMHPSYPSQWANVP 1271

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR 1684
            CYQRLEF+GD++LD     HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL 
Sbjct: 1272 CYQRLEFLGDSLLDMACVNHLFTKYPDKDPQWLTEHKMAMVSNKFLGSLAVGLNLHVHLI 1331

Query: 1685 HGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC-KAPKVLGDIVESIAGAIFLDSGRDT 1743
            H S+ L  QI  + +E+    ++ G N        + PK L DIVE+  GAIF+DS  + 
Sbjct: 1332 HISNVLQGQITCYTEELQAMKMEMGGNLEAWTYTNEPPKCLPDIVEAYLGAIFVDSNFNF 1391

Query: 1744 SVVWQVF----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN- 1791
             V+   F    Q   + M   +T    HP+  L  R      C   A   +      G  
Sbjct: 1392 DVIDDFFKRFIQHYFEDMTVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTT 1451

Query: 1792 ---LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAK 1836
               LA V V+ D V  GVA +P  + A+  A++NAL +L++  TAE +
Sbjct: 1452 IRALAAVCVHNDIVAEGVATSP--RHAKLKASQNALQILEQMSTAEFR 1497


>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease DCL1; Includes: RecName:
           Full=ATP-dependent helicase DCL1
 gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
          Length = 1500

 Score =  265 bits (678), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 220/704 (31%), Positives = 332/704 (47%), Gaps = 124/704 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AKK N IA L+TG+GKTLIAVLL++ I      D   +    ++ FLV  
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEKPHRVSFFLVDS 159

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQA V++      V  +CG M  D W+ + W+R      V+V TA++L   L H+
Sbjct: 160 VTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLHA 219

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +KME INLLI DE H+A K HPY+ ++ +FY      KRP +FGMTASPV+ K     +
Sbjct: 220 FVKMENINLLIFDEAHNAKKDHPYARIVKDFYLKDGNAKRPKIFGMTASPVDAK-----M 274

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D      NLE+ L+S + T  +   L + VP P+E V         WS +++L Q     
Sbjct: 275 DVVKAARNLETLLNSQIATASNLSLLRQSVPRPNEEV---------WS-YDRLDQ----P 320

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            E       RS++        G    L +++  S +  S+                  LG
Sbjct: 321 FETRLYKELRSRF--------GDLRALEKLFTFSLKASSN------------------LG 354

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD------ 654
            WCA  V    LT                 E  L K+         EG  ++        
Sbjct: 355 AWCADWVWSYALT-----------------EESLPKL---------EGRAARTAMGNLPI 388

Query: 655 AKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
           AK+V  E          I E  E++ SH              AV    ++PKV+ L   L
Sbjct: 389 AKIVRPE-----AEIQRIREASEIIRSHKFGD---------PAVRPELLSPKVRRLHHEL 434

Query: 714 LKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG--HNNSQEMRTFQM 769
           LKY  +HT D + I+F E+   A +L  +F+ + +   ++   LIG   + S  M     
Sbjct: 435 LKYFERHT-DTKCIVFTEQRHTARILCDLFSRIGT-KHLRPGVLIGVRSDASGGMNISFR 492

Query: 770 QETIA--KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           Q+ +A   FR G V  L ATSVAEEGLDI  CN+++RFDLA T+  YIQSRGRAR   S 
Sbjct: 493 QQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRGRARHMNST 552

Query: 828 YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV----- 882
           +  ++ER N  H   + + ++SEE +++  I     S  KD  R+++ D V         
Sbjct: 553 FAHLVERDNFVHRESVNHLQSSEEIMKRFCI-----SLPKD--RILNSDDVDALYESDRN 605

Query: 883 ---YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              Y V++TGA ++ +S++ ++  + + L  ++ +     +   R  K      + C++ 
Sbjct: 606 RKSYTVQTTGAKLTYSSSLVVLAHFANSLQYEKETSTVVSY-YHRFTK----NAFVCEVV 660

Query: 940 LPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
           LP  +P   + G   S   +A+Q+     C  L + G   D  +
Sbjct: 661 LPEKSPIRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 704



 Score =  172 bits (435), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 173/581 (29%), Positives = 262/581 (45%), Gaps = 91/581 (15%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+I+   +   +NLL  R    + +EG+        YY+ L P    I  +P S+   A
Sbjct: 950  QPVIKAEIIQLRRNLLDKRTNKEKIKEGD--------YYICLEP--LTISAIPASVAAFA 999

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+ES L+A++   +++ P+     LEALT  S        Q+          
Sbjct: 1000 FAFPAIISRIESYLIALEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMGKN 1059

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  +V N  L++ A+   L ++I++
Sbjct: 1060 YERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYAFIRS 1119

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W  PG L +              Q K                       G+ +
Sbjct: 1120 QSFSRRGWY-PGGLTLL-------------QGK-----------------------GQSK 1142

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPS 1577
            G + +   L+ KT+ADV EALIG   +   K+    + +K +   V SD   V      S
Sbjct: 1143 GATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYS 1202

Query: 1578 RPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPSSG--VSCYQRL 1629
            R   +P+     VD   L+ A ++K      FK   LL  A TH S PS+   V CYQRL
Sbjct: 1203 RLYSIPKYQTAVVDAAELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRL 1262

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDA+LD    +H++  + +  P  LT+ + A V+N+    VAV+  LH HL H S++
Sbjct: 1263 EFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTS 1322

Query: 1690 LDRQIRDFVKEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            L  QI ++V+E+    L+ G   +++ L     PK L D+VE+  GAIF+DSG    VV 
Sbjct: 1323 LQSQITNYVEEIEAAELESGDPPDAWTLTS-DPPKCLPDMVEAYIGAIFIDSGFSFEVVE 1381

Query: 1748 QVFQPLL-----DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG- 1801
            + FQ  L     D  +       HP   L  R       +++  S     A    Y+DG 
Sbjct: 1382 EFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRL-----AIDFGCSNYCLKAGEVPYVDGP 1436

Query: 1802 ---VQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKG 1839
               V   V  +  + +A+ +A+ +  A LK  E A +K +G
Sbjct: 1437 GTRVLAAVIVH-DEVVAEGVASSSRYAKLKASEAALSKLEG 1476


>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
          Length = 1921

 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 217/765 (28%), Positives = 360/765 (47%), Gaps = 91/765 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  +  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y      + W  ++W +EF   QVLVMT  + L +LR+ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVM--SEFYHTTSKEKRPSVFGMTASPVNLK---- 474
             + +  INLL+ DECH A++ HPY  +M   E Y +      P + G+TAS +N K    
Sbjct: 163  YLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSC-----PRILGLTASILNGKCDPA 217

Query: 475  --GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSL 529
                  +    I   N E+  D VV        L+++   P E+VV+   Y   + L+  
Sbjct: 218  ELEEKIKKLEKILKSNAETATDLVV--------LDRYTSQPCEIVVDCGPYTDKSGLYG- 268

Query: 530  HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
               L++++ A+              F+   +     + R    +S++  SD  A L+   
Sbjct: 269  -RLLRELDEAL-------------HFLNDCNISVHSKERDSTLISKQILSDCRAVLVV-- 312

Query: 590  RAINYALGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCEL 645
                     LG WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +   
Sbjct: 313  ---------LGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHF 363

Query: 646  VEGAVSKK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
               ++  K    KV+       +    E ++ E ++ +     ++      +   D    
Sbjct: 364  SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEE 423

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH- 758
             + +   +       T     IIFVER   A+VL ++  E     P L+++ S  + GH 
Sbjct: 424  IEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHG 483

Query: 759  -------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
                   N   E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL    
Sbjct: 484  IGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEY 543

Query: 812  LAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTS 870
             +Y+QS+GRAR P S+YI++ +   + S    L+  +  E+ LR +  +  D + ++   
Sbjct: 544  RSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTNEMETEP 603

Query: 871  RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
             +   D  P  V + +     V++N+A+G I+ YC++LPSD ++ L P+   +  E P  
Sbjct: 604  IVDDDDVFPPYVLRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTRELPDH 661

Query: 931  PTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG 989
             T YS  L LP N+P    + GP  S  RLA++ V L  C+KLH++G   D L+P    G
Sbjct: 662  -TFYS-TLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMP---VG 716

Query: 990  EQQEKVDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            ++  K ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 717  KETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 761



 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 151/482 (31%), Positives = 227/482 (47%), Gaps = 79/482 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDED 1481
            FL+Y Q+H   +  M   M S   + + +LS    +    +  AP + ++ G +P F  D
Sbjct: 1441 FLEYDQEHIKFIDSML--MGSGAFVKKISLSHFSTTDSNYEWKAPKK-SSQGNVP-FSSD 1496

Query: 1482 TKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              D D S        D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 1497 FDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDAGKQSISYDLHTEQCIAD 1555

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCP----------- 1576
            K++AD VEAL+G Y    G+ AA   +  +G++V     +SD E   CP           
Sbjct: 1556 KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKSDWESTLCPTGENCNSEQKN 1615

Query: 1577 ----SRPACV-------------------PESVLRSVD-----------FHALEDALKIK 1602
                S  AC+                   P  +    D           F   E  +   
Sbjct: 1616 LSPNSVSACIVNSEPFLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYS 1675

Query: 1603 FKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
            FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR
Sbjct: 1676 FKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLR 1735

Query: 1662 AAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNS 1712
            +A VNN  FA +AVK+  H + +  S  L   I DFV+  +E         EL +   + 
Sbjct: 1736 SALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDE 1795

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRE 1770
                D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  PVRE
Sbjct: 1796 EKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRE 1855

Query: 1771 LQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            L E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK 
Sbjct: 1856 LLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKA 1913

Query: 1830 KE 1831
             +
Sbjct: 1914 NQ 1915



 Score = 81.3 bits (199), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 19/161 (11%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1298 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1357

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KGL S +    F  P  W  PG   + ++D  + D   ++++++  E  L   K
Sbjct: 1358 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQDKSNTDK--WEKDETTKESLLANGK 1413

Query: 1506 -NYNEY-------------EDDDMEDGELEGDSSSYRVLSS 1532
             NY +              E+ D ED  LE D    + + S
Sbjct: 1414 LNYGDDDEEDEDLMWRLPKEETDFEDDFLEYDQEHIKFIDS 1454



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 944  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 996

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 997  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1053

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1054 LPSILYRLHCLLTAEELR 1071



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 64/230 (27%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1643 IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYSFKNKAYLLQAFTHAS 1690

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1691 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1750

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D                             ++  
Sbjct: 1751 YDYHKYFKA--------VSPELFHVID-----------------------------DFVQ 1773

Query: 1513 DDMEDGELEGDSSSYR-----------VLSSKTLADVVEALIGVYYVEGG 1551
              ME  E++G  S  R           +   K + D+ E+L G  Y++ G
Sbjct: 1774 FQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1823



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1296 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1353

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1354 NCNLYRLGKKKGL 1366


>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
          Length = 1917

 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 218/747 (29%), Positives = 347/747 (46%), Gaps = 69/747 (9%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++LE A   NTI  L TG+GKT IAVLL +     I  D  R  K+   VFLV  
Sbjct: 45   RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRSGKR--TVFLVNS 102

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V QQ   +R  +   VG Y        W  ++W +EF   QVLVMT  + LN+L++ 
Sbjct: 103  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKEKWSQEFMKHQVLVMTCYVALNVLKNG 162

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             + +  INLL+ DECH A+  HPY  +M    +  S    P + G+TAS +N K    ++
Sbjct: 163  YLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSC---PRILGLTASILNGKCDPEEL 219

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +   KI  LE  L S   T  D   L+++   P E+VV+         L+          
Sbjct: 220  E--EKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLY---------- 267

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                          F+   +     + R    +S++  SD  A L+            LG
Sbjct: 268  --GRLLLELEEALNFINDCNIPVHSKERDSTLISKQILSDCRAVLVV-----------LG 314

Query: 601  QWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--D 654
             WCA KVA   +  LQ    +++   ++  + F +++L K+ +L +      ++  K   
Sbjct: 315  PWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVT 374

Query: 655  AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
             KV+       +    E ++ E ++ +     ++      +   D     + +   +   
Sbjct: 375  PKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNF 434

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NNSQ 762
                T     IIFVER   A+VL ++  E     P L+++ S  + GH        N   
Sbjct: 435  PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQM 494

Query: 763  EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            E    + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR
Sbjct: 495  EAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR 554

Query: 823  KPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT 881
             P S+YI++ +   + S    L+  +  E+ LR +  +  D         +   D  P  
Sbjct: 555  APISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEPDIEPVVDDDDVFPPY 614

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            V + +  G  V++N+A+G I+ YC++LPSD ++ L P+      E P G T YS  L LP
Sbjct: 615  VLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CRTRELPDG-TFYS-TLYLP 670

Query: 942  CNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
             N+P    + GP  S +RLA++ V L  C+KLH++G   D L+P    G++  K ++  +
Sbjct: 671  INSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMP---VGKETVKYEEELD 727

Query: 1001 GEPL--------PGTARHREFYPEGVA 1019
                        PG+ + R+ YP+ V+
Sbjct: 728  LHDEEETSVPGRPGSTKRRQCYPKAVS 754



 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 224/486 (46%), Gaps = 94/486 (19%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P   P+    
Sbjct: 1444 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSPLGSMP 1495

Query: 1478 FDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYR 1528
            F  D +D D S        D  K+V ED       +N  E++   D     +  D  + +
Sbjct: 1496 FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQ 1554

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR----- 1578
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R     
Sbjct: 1555 CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSS 1614

Query: 1579 ----------PACVP---ESVLRSVD---------------------------FHALEDA 1598
                      PA       SVL+ ++                           F   E  
Sbjct: 1615 QQKNLSGSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKK 1674

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG L
Sbjct: 1675 INYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVL 1734

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKP 1708
            TDLR+A VNN  FA +A       + +  S  L   I DFV+  LE         EL + 
Sbjct: 1735 TDLRSALVNNTIFASLA-------YFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRS 1787

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMH 1766
              +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P  
Sbjct: 1788 EEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRS 1847

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL 
Sbjct: 1848 PVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALR 1905

Query: 1826 VLKEKE 1831
             LK  +
Sbjct: 1906 SLKANQ 1911



 Score = 80.5 bits (197), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 945  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 997

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 998  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1054

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1055 LPSILYRLHCLLTAEELR 1072



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1299 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1358

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1359 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1397



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1297 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1354

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1355 NCNLYRLGKKKGL 1367



 Score = 46.2 bits (108), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 16/123 (13%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1646 IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 1693

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A  
Sbjct: 1694 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAYF 1753

Query: 1453 KGL 1455
            K +
Sbjct: 1754 KAV 1756


>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
 gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
          Length = 1591

 Score =  265 bits (677), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 212/690 (30%), Positives = 328/690 (47%), Gaps = 117/690 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNK---KMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIA LL+R +I N+L+ ++K   K +A FLV K
Sbjct: 138 RDYQLELFERAKAQNTIAVLDTGSGKTLIAALLLRWTIQNELENRSKGLPKRVAFFLVDK 197

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+     Y +  +CG+M  +    + W + FD    +V+TA+IL   L HS
Sbjct: 198 VALVFQQHAVLACNLDYPIEKFCGDMVDEVSSKEFWDKTFDENMAIVLTAEILYQCLHHS 257

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE-KRPSVFGMTASPVNLKGVSSQ 479
            I+M+ INLL+ DE HH  K HPY+ ++ +FY     E +RP +FGMTASPV+     +Q
Sbjct: 258 YIRMDQINLLVFDEAHHTKKNHPYARIIKDFYIEVKDEGQRPRIFGMTASPVD-----AQ 312

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPS-EVVVEYDKAASLW--SLHEQLKQM 536
           +D  +    LE+ L S + T+ D   L+     P  E +VEY++    W   L+  LK++
Sbjct: 313 IDPVVAAAELEALLHSQIATVADTAVLQHTAAKPEHEFLVEYERRPPDWETDLNRALKEL 372

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                                    G     ++ +  ++                   A 
Sbjct: 373 ------------------------VGGHRIFKKPFAFTDT------------------AA 390

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
            ELG WCA +  Q F                 F+E    K+ S  + EL+      +   
Sbjct: 391 AELGPWCADRYWQLF-----------------FREDNAVKLESRTERELLREFAYHQS-- 431

Query: 657 VVDSENGFVEGGTNEIEEGEL----LDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
            +D   G V+     + +       L  H++S                    KV  L++I
Sbjct: 432 -MDEHIGKVKQAYQLVNQHRFPRPGLSPHLLSS-------------------KVILLVRI 471

Query: 713 LLKYQHTEDF--RAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ-----EM 764
           L    +  D   R I+FV +R VA L++  +      +  +K   L+G    +     E 
Sbjct: 472 LWDQFNGGDTNRRCIVFVRQRNVATLLVDLLQQPEMKIPGLKPGVLVGGGRPEASWDNEK 531

Query: 765 RTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            T++ Q  TI KF+ G +  + ATSVAEEGLDI  CNV+IR+DL  T++ YIQSRGRAR+
Sbjct: 532 VTYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNDTLIQYIQSRGRARQ 591

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--ERTDLSHLKDTSRLISVDAVP 879
            GS YI M E+GN  H+  L   +  E+ LRK  EA+  +R   ++  D    +  +   
Sbjct: 592 AGSVYIHMAEKGNADHSRLLSLNKQGEDVLRKFCEAMPEDRKLNANTFDMDYFLRKEK-D 650

Query: 880 GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              Y V  TGA ++   ++  +  + + LP      L  ++++     PGG   + C++ 
Sbjct: 651 QRQYTVPETGAKLNYKQSMACLATFVASLPHPPEVSLTADYLV--LPVPGG---FQCEVT 705

Query: 940 LPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           LP ++P   + G V  S  +A+ +     C
Sbjct: 706 LPESSPIRSVTGRVHLSKVVAKCSAAFEMC 735



 Score =  123 bits (309), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 202/498 (40%), Gaps = 99/498 (19%)

Query: 1337 LPPELCF-------IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILE 1389
            L P+ CF       I PLP  +V  A   P+I+ R++S L+A+     +   +     LE
Sbjct: 1027 LEPKPCFLALEPLRISPLPVDVVAMAYNFPAIIHRIDSNLVALDACKMLGLDIRPDLALE 1086

Query: 1390 ALTAASC--------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
            A T  S         Q  F       YER E LGD +LK   +  +F   P K E     
Sbjct: 1087 AFTKDSDNTEERDAEQVNFQGGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFDYHV 1146

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKS 1495
             R  MV N  L+  AL+  L+ YI++  F    W   G++                    
Sbjct: 1147 ERMLMVCNRNLFNNALNVKLEEYIRSMAFDRRSWYPEGLV-------------------- 1186

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA 1555
                               +  G+   D +   +L+ KT+ADV EALIG  Y+   +   
Sbjct: 1187 -------------------LRKGK-RKDITRQHMLADKTIADVCEALIGAAYLTAQEKDP 1226

Query: 1556 NH----------LMKWIGIQVESDPEEVGCPSRP--ACVPESVLR---SVDFHALEDALK 1600
            N+          L+K     + S  +      +P     P +  +   +  FHA    + 
Sbjct: 1227 NNFDLAVQAVTALVKDKNHTMTSYRDYYAAYVKPDWQTAPANSTQLDMAARFHA---RMG 1283

Query: 1601 IKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
              FK   LL  A  H + PS    +  YQRLEF+GDA+LD    + LF  +    P  LT
Sbjct: 1284 YAFKHPRLLRSAFQHPTYPSMYERLPSYQRLEFLGDALLDMASVEFLFHRFPGADPQWLT 1343

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG-- 1716
            + + A V+N+    +AV+   H  L + S AL R+I ++V E+ E L     ++   G  
Sbjct: 1344 EHKMAMVSNQFLGCLAVELGFHRALTYCSPALQREIGEYVAEMEEALQSAREDAARHGRR 1403

Query: 1717 ----------DC-KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPE 1761
                      DC + PK L D VE+  GA+F+DS  D   V   F    +P  + M   +
Sbjct: 1404 EDEYSRDYWVDCSRPPKCLPDTVEAYVGAVFVDSEYDFGRVRDFFARHVRPFFEDMRLYD 1463

Query: 1762 TLP-MHPVRELQERCQQQ 1778
            T    HPV  L    QQ+
Sbjct: 1464 TFANKHPVTFLAGVMQQR 1481


>gi|313236326|emb|CBY11646.1| unnamed protein product [Oikopleura dioica]
          Length = 1519

 Score =  264 bits (675), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 195/598 (32%), Positives = 292/598 (48%), Gaps = 117/598 (19%)

Query: 1243 AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGR 1302
            A +  RFYV  I+Y+M  +S FP  +       Y S+  YY Q++ + L  +KQPL+   
Sbjct: 905  APTQNRFYVAEIQYDMDPDSPFPADD-------YESFRQYYMQRWALCLTNEKQPLLDVD 957

Query: 1303 GVSYCKNLLSPRFEHSEEQ-------EGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
                  NLL+PRF   + +       E + ++  DK    +L PE+  +HP+  SL R A
Sbjct: 958  HTDCRLNLLTPRFVTQKGRALPASALEKKRQKYEDKANRQYLIPEILDVHPVSASLWRKA 1017

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKW 1415
              LPSI+ R+  +L A  L+ +I+      +IL+ LT +   + F  ER E+LGD +LK+
Sbjct: 1018 VCLPSILHRITCLLAAEDLRRRISRQTRVDQILQTLTLSKSSDGFNLERLEMLGDCFLKY 1077

Query: 1416 VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS----RWAA 1471
             V+ +L+ KY  +HEGQL+  R + VSN  L++  +   +   + A++F  +     W  
Sbjct: 1078 SVTVYLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDIPGRMVAEQFMQNDTGGNWLP 1137

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
            PG                F+++ +  E  L     YN Y D               + L+
Sbjct: 1138 PGY---------------FNKDHAALEKPLI----YNHYSD---------------QYLT 1163

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES------ 1585
             K++AD +EALIG Y    G +A    + ++G+ V         PS  +C PE+      
Sbjct: 1164 DKSIADCMEALIGAYLKATGIEATQQFLCYMGLIV--------LPSS-SCEPETGKPLPP 1214

Query: 1586 -----------------------VLRSVD-----FHALEDALKIKFKDRGLLVEAITHAS 1617
                                    L+++D     +   E  +   FK++G L++++THAS
Sbjct: 1215 FLLLAPPIEPFHLKSCTQLEKMQRLQALDKLTRTYGEFEKKIGYTFKNKGYLLQSLTHAS 1274

Query: 1618 RPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTN-LPPGRLTDLRAAAVNNENFARVAV 1675
               + V+ CYQRLEF+GDAVLD LIT+HLF   T    PG LTDLRAA VNN  FA +AV
Sbjct: 1275 YQYNQVTNCYQRLEFLGDAVLDFLITRHLFDHPTKRFSPGELTDLRAALVNNNIFAALAV 1334

Query: 1676 KHKLHVHLRHGSSALDRQIRDFV--------KEVLEELLK----------PGFNSFGLGD 1717
            K   H +L   +  L   IRD+V         E +E +LK             +     D
Sbjct: 1335 KFDFHKYLYALTPDLHNVIRDYVLYCQTRQDVEGMEAVLKRIRLEEEPEEEEGDHEDSED 1394

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--PMHPVRELQE 1773
             + PKVLGDI ES+AGAI+LDSG +   VW V++P+L   +   ++  P  P+REL E
Sbjct: 1395 IEVPKVLGDIYESVAGAIYLDSGMNLDAVWGVYRPMLQKYIDKYSINPPRSPIRELLE 1452



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 100/445 (22%), Positives = 184/445 (41%), Gaps = 90/445 (20%)

Query: 745  PSLSFVKSASLI---------GHNNSQEM--RTFQMQETIAKFRDGRVTLLVATSVAEE- 792
            P L+ + S +L          GH + +E+     + +E + KFR     +L+A +  E  
Sbjct: 451  PDLAHISSQALCQLAKVDNPNGHLDEEEIADEKKKQEEALHKFRTREANILIAQAETENE 510

Query: 793  ---GLDIRQCNVVIRFDLAKTVLAY------IQSRGRA-------RKPGSDYILMIERGN 836
                 DI +CN+V+RFD   + L Y      +  +  A       +K    +  M+E   
Sbjct: 511  AHRHFDIPKCNLVVRFDAPGSYLRYDGGKRLLSQQNDALYGILINKKEKIQFCRMLEEFK 570

Query: 837  LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNS 896
            +        A  +EE    E     D++HL         + +P    Q++     +S+ +
Sbjct: 571  MLEEYLKNRASLAEEAGPAELCLDLDVTHL--------FEDMPKMRPQIK-----LSMQN 617

Query: 897  AVGLIHFYCSQLPSDRY---SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
            ++ L++ YC++LP D +   S+LR    +          ++   L LP N+    L G V
Sbjct: 618  SLSLLNKYCNRLPCDSFTQLSVLRKTLQL-------ANGKFQTSLVLPNNS---HLRGIV 667

Query: 954  C----SSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLP---- 1005
                  +  L++++  L AC KL  +G   D L     S ++ +K     +  P P    
Sbjct: 668  VGHPKETAELSKRSAALEACTKLRILGELDDFLF---NSSKEMDKYKFEIDPFPNPLSRK 724

Query: 1006 --------GTARHREFYPEGVADILQGEWILSGRDGCTGSKL--FHLFMYTVKCV-NNGI 1054
                    G  + R+ YP  +   L+ +   S  +G +   +     ++Y +     +G+
Sbjct: 725  RKPPPGMEGGPKRRQKYPRHIPRSLRAKPKDSKAEGASALPVPEKECYVYRISMFYRHGV 784

Query: 1055 SKDPFLTQVSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKA---YL 1111
            + +P   QV      FS+    +L  +K+FH  ++  V+ ++       ++P K+   YL
Sbjct: 785  NLEPIHQQVC-----FSA---TQLEIIKSFHQYIIQDVIRIERPGGVVQFNPDKSPVPYL 836

Query: 1112 FVPVVSDKSVDPMNELDWD-LVEKI 1135
              PV  D  ++   E+DWD L E I
Sbjct: 837  IAPVDCDNGIE--WEIDWDYLTESI 859


>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
          Length = 1519

 Score =  263 bits (673), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 204/677 (30%), Positives = 316/677 (46%), Gaps = 99/677 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK+KN IA LETG+GKTLIAVLL++ +      D        ++ FLV  
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLKHVIEQELTDRSLGLPPRISFFLVDS 171

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W+ + W+  F    V+V TA++L   L HS
Sbjct: 172 VTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHS 231

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+++ INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V
Sbjct: 232 FIQIDQINLLIFDEAHHAKKEHPYARIIKDFY-LKEPERKPKIFGMTASPVDAK-----V 285

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +       LE+ LDS + T  +   L + V  P+E + EYD+             +E+  
Sbjct: 286 EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDR-------------LELPF 332

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E    S  R+           G  + L +V+  S  T S                   LG
Sbjct: 333 ETPLYSKLRQK---------FGDIKVLEKVFKFSRETSSS------------------LG 365

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            WC+  +    L+     E    +L+ +     +  V +   C+     + +  A + + 
Sbjct: 366 SWCSDWIWSYCLS-----EETLPKLEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEH 420

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
           E G      + +   ELL   V+   + +                         +++   
Sbjct: 421 EFG------DPVANPELLSRKVLLLRDQLLR-----------------------RFKENP 451

Query: 721 DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM----RTFQMQ-ETIAK 775
           D R I+F  +   A +L  +F ++ S  +++   L+G  +  +      +F+ Q   +  
Sbjct: 452 DTRCIVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDKIGLDISFREQFLNVIA 510

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G +  L ATSVAEEGLDI+ CN+++RFDL  T++ YIQSRGRAR   S +  M+ER 
Sbjct: 511 FRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERN 570

Query: 836 NLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
           NL H T +   R SEE L    K   E   L    D   +I  D    + Y ++STGA +
Sbjct: 571 NLMHETAVEEVRRSEEVLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKS-YTIKSTGAKL 629

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           +  S++ ++  Y S L  ++    +  +I+  H K G    + C+  LP  +P     G 
Sbjct: 630 TYPSSLAVLAHYASTLQYEKELSTQVSYII--HPKDGA---FICETILPEKSPIRGCMGK 684

Query: 953 VCSSMRLAQQAVCLAAC 969
             S   LA+Q+     C
Sbjct: 685 SASRKLLAKQSAAFETC 701



 Score =  161 bits (407), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 232/524 (44%), Gaps = 83/524 (15%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------CYE 1403
             P+I+ R+ES L+A++  +K+   +P    LEALT  S         Q  F       YE
Sbjct: 1014 FPAIIWRMESYLIALEACEKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYE 1073

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  +I++  
Sbjct: 1074 RLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRS 1133

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +  +D K                                     EG 
Sbjct: 1134 FSRRAWYPEGLTLLKGKDKK-------------------------------------EGP 1156

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPSRP 1579
            +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V      SR 
Sbjct: 1157 NGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRL 1216

Query: 1580 ACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPS--SGVSCYQRLEF 1631
              +P     S     ++ A +I+      FK   LL  A  H S PS  + V CYQRLEF
Sbjct: 1217 YSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEF 1276

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S+ L 
Sbjct: 1277 LGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQ 1336

Query: 1692 RQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             QI  + +E+  ++  ++    ++   + + PK L DIVE+  GAIF+DS  +  VV + 
Sbjct: 1337 GQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAIFVDSNFNFDVVDEF 1395

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN----LAT 1794
            F    Q   + M   +T    HP+  L  R      C   A   +      G     LA 
Sbjct: 1396 FRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVRALAA 1455

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            V V+ D V  GVA +P  + A+  A++NAL VL+E   A+ + K
Sbjct: 1456 VCVHDDIVAEGVASSP--RHAKLKASQNALQVLEEMSAADFRAK 1497


>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
 gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
          Length = 1522

 Score =  263 bits (672), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 219/720 (30%), Positives = 333/720 (46%), Gaps = 137/720 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDL-QRQNKK--MLAVFLVPK 360
           R YQL++ E+AK  NTIA L+TG+GKTLIAVLL++  I N+L  R N K   ++ FLV  
Sbjct: 91  REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W    W + F    ++V TA++L   L  S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+ME INLLI DE HHA K HPY+ ++ +FY      + RP +FGMTASPV+ K     
Sbjct: 211 FIQMERINLLIFDEAHHAKKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPVDAK----- 265

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
           VD       LE+ LDS + T  +   L + +P P+E +  YD+                 
Sbjct: 266 VDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR----------------- 308

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +++ +++   +S    M +R  G   EL +++  +    S                   L
Sbjct: 309 LDDPSETELYKS----MQSR-FGRIRELEKIFSFALEASS------------------TL 345

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G+WC+             D    + LD    E+ L K         +EG +SK     + 
Sbjct: 346 GRWCS-------------DWLWTFALD----EAELPK---------LEGKISK---SYMQ 376

Query: 660 SENGFVEGGTNEI-----EEGELLDSHV----VSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           S +G    G +E      E  +L+ SH     V   EH             ++ KV+ L 
Sbjct: 377 SRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEH-------------LSSKVRLLS 423

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTF 767
             L  Y  +HT D + I+F+++   A +L ++F+ + +   +++  LIG  ++      F
Sbjct: 424 HELSMYFERHT-DTKCIVFIQQRYTARLLAELFSRIGT-QHMRTGVLIGVRHDGIGGANF 481

Query: 768 QMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
             ++   T+ KFR G +  L ATSVAEEGLDI  CN+VIRFDL  T++ Y+QSRGRAR  
Sbjct: 482 SFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRGRARHS 541

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--------ERTDLSHLKDTSRLIS 874
            S Y  M+ER NL H++ +   + +E  +R+  EA+           DL  + D  R   
Sbjct: 542 HSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSDDLGMILDNERY-- 599

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL--PSDRYSILRPEFIMERHEKPGGPT 932
                   + + STGA ++  S++ ++  Y S L   S R   +      +         
Sbjct: 600 -----RNSFTIHSTGAKLTYESSLAVLAHYASSLVRVSARGRYMEANISKQYENDMSAQV 654

Query: 933 EY---------SCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            Y          C+  LP  +PF  + G   +    A+Q+     C  L + G   D  +
Sbjct: 655 NYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGLLDDHFV 714



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 218/489 (44%), Gaps = 86/489 (17%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP+ R   V   +NLL      +E+++GEG      TYY+   PE   I  LP  +   
Sbjct: 963  KQPVFRAELVRLRRNLLD---RETEQEKGEG-----TTYYIC--PEPLRISALPAPVAAF 1012

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  D ++  +     LEALT  S         Q  F      
Sbjct: 1013 AFAFPAIISRLESYLISLEACDMLHINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGK 1072

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +I+
Sbjct: 1073 NYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIR 1132

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                                        +  G+ 
Sbjct: 1133 TQGFSRRNWYPEGI---------------------------------------KLLQGKA 1153

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGK----DAANHLMKWIGIQVESD---PEEV 1573
            + +S +   L  KT+AD+ EALIG   + GGK    D+A   +K +   V SD     E 
Sbjct: 1154 KSESQNKHSLGDKTIADICEALIGASLLSGGKAHRFDSA---VKAVTTFVNSDDHRASEW 1210

Query: 1574 GCPSRPACVPESVLRSVDFHALE------DALKIKFKDRGLLVEAITHASRPS--SGVSC 1625
             C      +P+  +   D   L+      D L  +F+   LL  A THAS PS  S V C
Sbjct: 1211 NCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPC 1270

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GD++LD +  ++L+  Y +  P  LT+ + A V+N+    VAVK  LH HL +
Sbjct: 1271 YQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIY 1330

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNS---FGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             S+AL  QI  +V+E+  EL +   N+           PK L D++E+  GAIF+DS   
Sbjct: 1331 FSNALLGQITRYVEEI--ELAEADSNNSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFK 1388

Query: 1743 TSVVWQVFQ 1751
              VV   FQ
Sbjct: 1389 FEVVEDFFQ 1397


>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
          Length = 1522

 Score =  263 bits (672), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 219/720 (30%), Positives = 333/720 (46%), Gaps = 137/720 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDL-QRQNKK--MLAVFLVPK 360
           R YQL++ E+AK  NTIA L+TG+GKTLIAVLL++  I N+L  R N K   ++ FLV  
Sbjct: 91  REYQLELFEKAKTANTIAVLDTGSGKTLIAVLLLKQMIQNELADRANGKPPRISFFLVDT 150

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W    W + F    ++V TA++L   L  S
Sbjct: 151 VTLVYQQAAVLKANIDQNIDKFCGAMQTDLWSKDTWDKHFSRNMIIVCTAEVLHQCLLRS 210

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+ME INLLI DE HHA K HPY+ ++ +FY      + RP +FGMTASPV+ K     
Sbjct: 211 FIQMERINLLIFDEAHHAKKDHPYARIIKDFYLQKIVVQNRPKIFGMTASPVDAK----- 265

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
           VD       LE+ LDS + T  +   L + +P P+E +  YD+                 
Sbjct: 266 VDVVKAAMTLEALLDSQIATASNLNALRQAIPRPNEQMWVYDR----------------- 308

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +++ +++   +S    M +R  G   EL +++  +    S                   L
Sbjct: 309 LDDPSETELYKS----MQSR-FGRIRELEKIFSFALEASS------------------TL 345

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G+WC+             D    + LD    E+ L K         +EG +SK     + 
Sbjct: 346 GRWCS-------------DWLWTFALD----EAELPK---------LEGKISK---SYMQ 376

Query: 660 SENGFVEGGTNEI-----EEGELLDSHV----VSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           S +G    G +E      E  +L+ SH     V   EH             ++ KV+ L 
Sbjct: 377 SRSGNQLKGADEAIDLLREAAQLIKSHAFYTPVDCTEH-------------LSSKVRLLS 423

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTF 767
             L  Y  +HT D + I+F+++   A +L ++F+ + +   +++  LIG  ++      F
Sbjct: 424 HELSMYFERHT-DTKCIVFIQQRYTARLLAELFSRIGT-QHMRTGVLIGVRHDGIGGANF 481

Query: 768 QMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
             ++   T+ KFR G +  L ATSVAEEGLDI  CN+VIRFDL  T++ Y+QSRGRAR  
Sbjct: 482 SFRQQFLTLLKFRKGELNCLFATSVAEEGLDIPDCNLVIRFDLNSTMIQYVQSRGRARHS 541

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--------ERTDLSHLKDTSRLIS 874
            S Y  M+ER NL H++ +   + +E  +R+  EA+           DL  + D  R   
Sbjct: 542 HSIYAHMVERDNLIHSSSVEEVQRAENIMRRFCEALPEDRIIRGSSDDLGMILDNERY-- 599

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL--PSDRYSILRPEFIMERHEKPGGPT 932
                   + + STGA ++  S++ ++  Y S L   S R   +      +         
Sbjct: 600 -----RNSFTIHSTGAKLTYESSLAVLAHYASSLVRVSARGRYIEANISKQYENDMSAQV 654

Query: 933 EY---------SCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            Y          C+  LP  +PF  + G   +    A+Q+     C  L + G   D  +
Sbjct: 655 NYFIERIDGAFVCEASLPEKSPFRGMTGKPSARKLHAKQSAAFETCLMLRKNGLLDDHFV 714



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 218/489 (44%), Gaps = 86/489 (17%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP+ R   V   +NLL      +E+++GEG      TYY+   PE   I  LP  +   
Sbjct: 963  KQPVFRAELVRLRRNLLD---RETEQEKGEG-----TTYYIC--PEPLRISALPAPVAAF 1012

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  D ++  +     LEALT  S         Q  F      
Sbjct: 1013 AFAFPAIISRLESYLISLEACDMLHINIKTHLALEALTKDSDNTEEHRGEQIHFQRGMGK 1072

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +I+
Sbjct: 1073 NYERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLICNQNLFNTAVRIKLYEFIR 1132

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                                        +  G+ 
Sbjct: 1133 TQGFSRRNWYPEGI---------------------------------------KLLQGKA 1153

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGK----DAANHLMKWIGIQVESD---PEEV 1573
            + +S +   L  KT+AD+ EALIG   + GGK    D+A   +K +   V SD     E 
Sbjct: 1154 KSESQNKHSLGDKTIADICEALIGASLLSGGKAHRFDSA---VKAVTTFVNSDDHRASEW 1210

Query: 1574 GCPSRPACVPESVLRSVDFHALE------DALKIKFKDRGLLVEAITHASRPS--SGVSC 1625
             C      +P+  +   D   L+      D L  +F+   LL  A THAS PS  S V C
Sbjct: 1211 NCYVNLYSLPDYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPC 1270

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GD++LD +  ++L+  Y +  P  LT+ + A V+N+    VAVK  LH HL +
Sbjct: 1271 YQRLEFLGDSLLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIY 1330

Query: 1686 GSSALDRQIRDFVKEVLEELLKPGFNS---FGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             S+AL  QI  +V+E+  EL +   N+           PK L D++E+  GAIF+DS   
Sbjct: 1331 FSNALLGQITRYVEEI--ELAEADSNNSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFK 1388

Query: 1743 TSVVWQVFQ 1751
              VV   FQ
Sbjct: 1389 FEVVEDFFQ 1397


>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
           2508]
 gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma
           FGSC 2509]
          Length = 1583

 Score =  263 bits (672), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 215/705 (30%), Positives = 335/705 (47%), Gaps = 120/705 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK++NTIA L+TG+GKTLIA +L+R + N    D ++   + +A FLV K
Sbjct: 122 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGLPRRIAFFLVDK 181

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ   + +   + +   CGEM +       W+   +  +V+V TA+IL   L HS
Sbjct: 182 VALVFQQHSFLTKNLDFPMEKLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALHHS 241

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+ INLLI DE HH  K HPY+ ++  FY     E+RP + G+TASPV+ K     V
Sbjct: 242 WIRMDQINLLIFDEAHHTKKDHPYARIIKNFYIDEQLERRPRILGLTASPVDAK-----V 296

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMP-SEVVVEY--DKAASLWSLHEQLKQME 537
           D       LE+ L S + T  D   L+  +  P +E++VEY   +  S   L++QL+++ 
Sbjct: 297 DPRRAAAELEALLHSQIATAADPAALQHTICKPKTELIVEYVRGRPDSETVLNKQLRKL- 355

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
                                   G +E  +                  + L     A  
Sbjct: 356 -----------------------VGGQELFK------------------KPLNFTTSAAS 374

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
           +LG WCA +  Q F                 F++  + K+ S           +++D   
Sbjct: 375 KLGTWCADRYWQLF-----------------FKQEDIVKLESR----------TERDLMK 407

Query: 658 VDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
           V + +   E    ++ E  EL+++H  S          AA+    ++ KV  L++I L+ 
Sbjct: 408 VAALDEITEKHVKQVREAHELVNAHTFS---------PAALDPTMLSSKVIMLVRI-LRD 457

Query: 717 QHTEDF---RAIIFVERVVAALVL------PKVFAELPSLS--FVKSASLIGHNNSQEMR 765
           Q        R IIFV +   A++L      P++ + +PS++   +      G +      
Sbjct: 458 QFERGVGAQRCIIFVRQRNTAMLLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKI 517

Query: 766 TFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
            FQ Q   I KF+ G +  L ATSVAEEGLDI  CN+VIRFDL  T++  IQSRGRAR+P
Sbjct: 518 NFQQQNRIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRP 577

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAV---- 878
            S YI MIE+GN  H + +  A+ +E+ LRK  EA+        K T   +++D +    
Sbjct: 578 DSRYIQMIEKGNYEHHSRILRAKGAEDVLRKFCEALPEDR----KLTGNHMNLDYLLRKE 633

Query: 879 -PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK 937
                Y V  TGA +S   ++  +  + + LP    + L PE+ +     PGG   + C+
Sbjct: 634 KGKRQYTVPDTGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYIT--TVPGG---FQCE 688

Query: 938 LQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           + +P  +P +   G V  S  +A+ A     C  L + G   + L
Sbjct: 689 VVMPDASPIKSAVGKVHLSKGVAKCAAAFELCLALLKAGHLDNHL 733



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 230/594 (38%), Gaps = 121/594 (20%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGP--------------LEYSSYADYYK 1284
            +V      ++F+    R++M      P  +G + P              L YS+    + 
Sbjct: 920  VVDPYDGARKFFTHHRRHDMKPTDPVP--DGIVAPNHRAWRGLGTTHDILNYSN--SLWS 975

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLL--SPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
            +  G  +    QP++    +S  ++ L  + R E  E Q+             FL  E  
Sbjct: 976  KSRGFMIFQADQPVVEAALISTRRDFLDDTLRDEDVEPQQ------------CFLILEPM 1023

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------ 1396
             I P+P  +V      PSI+ RVES L+A+     +   +     LEA T  S       
Sbjct: 1024 RISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLALEAFTKDSDNSDEHD 1083

Query: 1397 --QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
              +E +       YER E LGD++LK   +  ++   P K E +    R  ++ N  L+ 
Sbjct: 1084 AEKENYQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLFN 1143

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL+ YI++  F   +W   G++       K G S                     
Sbjct: 1144 NALEIGLEEYIRSMSFNRRQWYPEGLI------LKKGKSK-------------------- 1177

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVE 1567
                          D+    VL+ K++ADV EALIG  Y+ G +  +  L +K +   V+
Sbjct: 1178 --------------DARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDLAIKAVTAMVK 1223

Query: 1568 SDPEEVGC----------PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS 1617
                 +            P+       S  R +      + L   FK   LL  A  H +
Sbjct: 1224 DKKHRMISYGDYYAVYQKPNWQTDPANSAQRDMA-KKFSERLGYSFKHPRLLRAAFQHPT 1282

Query: 1618 RPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
             PS    +  YQRLEF+GDA+ D +   +LF  +    P  LT+ + A V+N+    ++ 
Sbjct: 1283 YPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSF 1342

Query: 1676 KHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC----------------K 1719
                +  +   S ++ + I ++V E+ E L      +   G                  +
Sbjct: 1343 HLGFNKCIATMSPSILKDIAEYVAEIEEALEAAKEEAIKAGTTADEYSRDYWVHITHASR 1402

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ----PLLDPMVTPETLP-MHPV 1768
             PK L D+VE+  GAIF+DS  D SVV   F     P  + M   +T    HPV
Sbjct: 1403 LPKCLSDVVEAYIGAIFVDSEYDYSVVQNFFNTHVLPFFEDMHLYDTFANKHPV 1456


>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
          Length = 1519

 Score =  263 bits (671), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 204/677 (30%), Positives = 315/677 (46%), Gaps = 99/677 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK+KN IA LETG+GKTLIAVLL++ +      D         + FLV  
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLKHVIEQELTDRSLGLPPRFSFFLVDS 171

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W+ + W+  F    V+V TA++L   L HS
Sbjct: 172 VTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHS 231

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+++ INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V
Sbjct: 232 FIQIDQINLLIFDEAHHAKKEHPYARIIKDFY-LKEPERKPKIFGMTASPVDAK-----V 285

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +       LE+ LDS + T  +   L + V  P+E + EYD+             +E+  
Sbjct: 286 EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDR-------------LELPF 332

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E    S  R+           G  + L +V+  S  T S                   LG
Sbjct: 333 ETPLYSKLRQK---------FGDIKVLEKVFKFSRETSSS------------------LG 365

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            WC+  +    L+     E    +L+ +     +  V +   C+     + +  A + + 
Sbjct: 366 SWCSDWIWSYCLS-----EETLPKLEARSNRPLMKSVPNQSSCDTEAERIREAGAIIKEH 420

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
           E G      + +   ELL   V+   + +                         +++   
Sbjct: 421 EFG------DPVANPELLSRKVLLLRDQLLR-----------------------RFKENP 451

Query: 721 DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM----RTFQMQ-ETIAK 775
           D R I+F  +   A +L  +F ++ S  +++   L+G  +  +      +F+ Q   +  
Sbjct: 452 DTRCIVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDKIGLDISFREQFLNVIA 510

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G +  L ATSVAEEGLDI+ CN+++RFDL  T++ YIQSRGRAR   S +  M+ER 
Sbjct: 511 FRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERN 570

Query: 836 NLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
           NL H T +   R SEE L    K   E   L    D   +I  D    + Y ++STGA +
Sbjct: 571 NLMHETAVEEVRRSEEVLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKS-YTIKSTGAKL 629

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           +  S++ ++  Y S L  ++    +  +I+  H K G    + C+  LP  +P     G 
Sbjct: 630 TYPSSLAVLAHYASTLQYEKELSTQVSYII--HPKDGA---FICETILPEKSPIRGCMGK 684

Query: 953 VCSSMRLAQQAVCLAAC 969
             S   LA+Q+     C
Sbjct: 685 SASRKLLAKQSAAFETC 701



 Score =  161 bits (407), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 232/524 (44%), Gaps = 83/524 (15%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------CYE 1403
             P+I+ R+ES L+A++  +K+   +P    LEALT  S         Q  F       YE
Sbjct: 1014 FPAIIWRMESYLIALEACEKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYE 1073

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  +I++  
Sbjct: 1074 RLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRS 1133

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +  +D K                                     EG 
Sbjct: 1134 FSRRAWYPEGLTLLKGKDKK-------------------------------------EGP 1156

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPSRP 1579
            +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V      SR 
Sbjct: 1157 NGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRL 1216

Query: 1580 ACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPS--SGVSCYQRLEF 1631
              +P     S     ++ A +I+      FK   LL  A  H S PS  + V CYQRLEF
Sbjct: 1217 YSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEF 1276

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S+ L 
Sbjct: 1277 LGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQ 1336

Query: 1692 RQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             QI  + +E+  ++  ++    ++   + + PK L DIVE+  GAIF+DS  +  VV + 
Sbjct: 1337 GQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAIFVDSNFNFDVVDEF 1395

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN----LAT 1794
            F    Q   + M   +T    HP+  L  R      C   A   +      G     LA 
Sbjct: 1396 FRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVRALAA 1455

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            V V+ D V  GVA +P  + A+  A++NAL VL+E   A+ + K
Sbjct: 1456 VCVHDDIVAEGVASSP--RHAKLKASQNALQVLEEMSAADFRAK 1497


>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
 gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
          Length = 1970

 Score =  263 bits (671), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 239/758 (31%), Positives = 358/758 (47%), Gaps = 121/758 (15%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDLQ-RQNKKMLAVFLVPKVP 362
            R YQ+++L++A + N I  L TG+GKT IAVLLI+   C  ++  +N    A FLV KV 
Sbjct: 40   RDYQIELLDKACRGNVIVPLGTGSGKTFIAVLLIKEHTCKLIEPLENGGKRAFFLVDKVS 99

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV QQA  I   T   VG   G +  D W D  ++       QV+V TAQ+ L++L H+ 
Sbjct: 100  LVDQQAAHIEHHTTLKVGRMHGHLNSDIWSDQSKFNTFIAEHQVVVSTAQVFLDVLDHAF 159

Query: 422  IKMEAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
              M    LLI DECHH +  KH Y ++M   Y    K +RP + G+TAS +N K   S +
Sbjct: 160  FNMNNAALLIFDECHHVLGSKHAYRVIMHR-YSQLPKSERPKILGLTASLINNKTPPSNL 218

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE-----YDKAAS---LWSLHEQ 532
            +  ++   LE  + S + T  D   + K+   P E V+E     YD+  +   + SL E 
Sbjct: 219  ERVLE--KLELIMQSNIETASDLVSVAKYGAKPKEFVIECEDFIYDECKASRKVISLLED 276

Query: 533  LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
            L+ M +   E            F    D   ++ L                     + AI
Sbjct: 277  LRAMCMECRE------------FHPEFDVDPRKPL---------------------MEAI 303

Query: 593  NYALG---ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLS-KVVSLLQCELVEG 648
            N  L    ++G WCA+KV Q F            QL     + +L+ K +  LQ     G
Sbjct: 304  NRTLSVFKQMGPWCAWKVCQLF----------QRQLKKHIGQPFLTEKQILFLQM----G 349

Query: 649  AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
              + + +K +  E  F  G     E   LL + +V   E +D    + ++  K+ P    
Sbjct: 350  ETTMRLSKKILDEKVF--GVKCYAELKPLLPNRIVRLMEILDYYSPSNIS--KIDPNFS- 404

Query: 709  LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPS-----LSFVKSASLIGHNN--- 760
                         F  IIFV++   A V+  +   +         +V S  +IG+++   
Sbjct: 405  -------------FCGIIFVKQRYVAYVMNTLVKAIAKWDKDRFGYVVSDFVIGYSSANI 451

Query: 761  -SQEMRTF--QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
             S+E      + +E + KFR  ++ LLVATSV EEG+D++QCNVVIRFD      AYIQS
Sbjct: 452  GSEETMALHKRQEEVLRKFRQKQLNLLVATSVLEEGVDVKQCNVVIRFDRPTDYRAYIQS 511

Query: 818  RGRARKPGSDYILMIERGNLSHATF-LRNARNSEETLRKEAIERTDLSH-LKDTSRLISV 875
            +GRARK G+ Y ++IE  + ++ +  L++    E+ L K    R   +H   D   L S 
Sbjct: 512  KGRARKEGASYYILIEHSDRANCSSDLKDFFQIEQMLLK----RYRTAHNPPDGMPLCSE 567

Query: 876  DAVPGTV--YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP---GG 930
              V   V  Y VESTGA V+++SA+ L++ YC++LPSD ++ L P    +    P    G
Sbjct: 568  QEVDAKVAPYVVESTGARVTMSSAIALVNRYCAKLPSDIFTRLVP----QNRIIPVSVNG 623

Query: 931  PTEYSCKLQLPCNAPFEK---LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
               Y  +L LP N+P +    L  P+  + +LAQ AV L  C++LHE     D LLP   
Sbjct: 624  SILYKAELLLPINSPLKNGIMLTTPM-ETKKLAQMAVALETCRRLHEHKELNDHLLPVGK 682

Query: 988  SGEQQEKVDQNDEGEPLP------GTARHREFYPEGVA 1019
                   +D +D  E +P      G+AR ++ Y + +A
Sbjct: 683  DTITLTALD-DDPDEFIPNMNYKVGSARRKQLYDKRMA 719



 Score =  219 bits (558), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 244/515 (47%), Gaps = 65/515 (12%)

Query: 1380 YPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
            Y V    +L+ALT ++  +    ER E +GD++LK+ V+ +LF   P++HEG+L+  R +
Sbjct: 1443 YGVSPCTLLQALTMSNASDGINLERLETVGDSFLKYAVTDYLFHMNPEQHEGKLSFARSK 1502

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGVLPVFD------EDTKDGD------ 1486
             VSN  LY+    + L S +   +F P+  W  P   P  D       D ++ D      
Sbjct: 1503 EVSNCNLYRLGKKRNLPSLMVGAKFDPNDSWLPPCYAPTSDFKAPNSSDAEERDKIMEKV 1562

Query: 1487 ---SSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-----LEGDSSSYRV--------- 1529
               S+  +Q     + + G D+  +  E   + DG        G +S++ V         
Sbjct: 1563 LEGSAAIEQTNFQVKVRTGWDEADSSSEVRQISDGVETINFPRGVASTWDVAEEISPLPY 1622

Query: 1530 -------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE--------VG 1574
                   L  K++AD VEALIG + +E G  A    MKW+G++V ++P          + 
Sbjct: 1623 NMLTQQYLGDKSIADAVEALIGAHLLELGPTATLKFMKWVGLKVLTEPVTLDPPLLRFID 1682

Query: 1575 CPSRP---ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLE 1630
             P  P    C          F  LED++  +FKDR  L++A THAS   + ++ CYQRLE
Sbjct: 1683 TPQEPELAICKLNEFWVQFQFSKLEDSICYRFKDRAYLLQAFTHASYYKNRITGCYQRLE 1742

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GDAVLD++IT+ LF       PG LTDLR+A VNN  FA +AVK+  H H       L
Sbjct: 1743 FLGDAVLDYVITRFLFQHPRQYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFVAMCPGL 1802

Query: 1691 DRQIRDFVKEVLEELLK-PGFNS-------------FGLGDCKAPKVLGDIVESIAGAIF 1736
               I  FV+   E+      FN+                 D + PK +GDI ES+AGAI+
Sbjct: 1803 HHMIEKFVRLCAEKNFSGANFNAEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIY 1862

Query: 1737 LDSGRDTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEYKASRSGNLAT 1794
            LDSGR   VVW+VF  L+   +       P  P+REL E   ++A   + +         
Sbjct: 1863 LDSGRSLDVVWRVFYNLMKETIEECCNNPPKSPIRELLELEPERARFSKLERILETGKVR 1922

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            V V I G           ++A+  AA+ AL  L++
Sbjct: 1923 VTVDIQGKCRFTGMGRSYRIAKCTAAKRALRYLRK 1957



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSE-----EQEGEGEEIL 1329
            +++++ DY+ QKY +E+  ++QPL+     S   NLL PR          E+   GE   
Sbjct: 931  KFANFNDYFIQKYNIEIYDQQQPLLDVDYTSSRLNLLMPRHTSRSRTRVMEERKPGET-- 988

Query: 1330 DKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
              +    L PEL  +HP+  SL      LP+++ R+  +LLA +L++ I
Sbjct: 989  -SSQGQILVPELVDVHPIAASLWNVIAALPTLLYRINCLLLADELRETI 1036


>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
          Length = 1546

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 212/697 (30%), Positives = 325/697 (46%), Gaps = 116/697 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQ-RQNKK-----MLAVFL 357
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +I N+L  R N K        VF+
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186

Query: 358 -------------VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
                        V  V L YQQA V+R      V H+ G MG D WD + W +      
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVVRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           V+V TA+IL   L +S ++M+ INLLI DE HHA K HPY+ ++ + Y      +RP VF
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVF 306

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA 524
           GMTASP++ KG  ++    +    LE+ LDS + T      L + V  P E V  Y++  
Sbjct: 307 GMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAYNRL- 365

Query: 525 SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
                     +   A E           ++ M  R  G  + L  VY  +    S     
Sbjct: 366 ----------EPPFATE----------LYKLMDTR-YGNIKVLEGVYRFAWNASS----- 399

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
                        ELG+WC+    +++  AL +D               L K+       
Sbjct: 400 -------------ELGKWCS---DRAWWHALADD--------------VLPKL------- 422

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVAD----G 700
             EG ++K            +E  T + E G +    ++   E  + +      D    G
Sbjct: 423 --EGNINK-----------LIESNTMKAEHGAVFKD-IIRIREASETVKNYFFTDPELPG 468

Query: 701 KVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
           +++PKVQ L   L K +  T   + I+F ++   A +L ++F  L ++  ++   LIG  
Sbjct: 469 ELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVL-NIPNLRPGVLIGVR 527

Query: 760 NSQ---EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                    TF+ Q   + KFR G +  L ATSVAEEGLDI  CN+VIRFDL +T++ Y+
Sbjct: 528 PGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYV 587

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLI 873
           QSRGRAR   S Y +M+E+ N  H   L+  R +E  +R+  E +    + H  D     
Sbjct: 588 QSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGNDHDLDS 647

Query: 874 SVDAVPG-TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +    G   + V+STGA ++ +SA+ ++  Y S L  ++ ++ +  +++          
Sbjct: 648 FLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVT-----IASN 702

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
            Y C++ LP  +P   L G       +A+++     C
Sbjct: 703 AYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTC 739



 Score =  146 bits (368), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 160/596 (26%), Positives = 247/596 (41%), Gaps = 99/596 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL       +E + E           F+  E   I  LP S+V   
Sbjct: 1000 QPVLQAELVRLRRNLLDKMTTQEKEMQTE----------CFICAEPLRISALPPSIVSTC 1049

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L+A++  D++   +     LEA T  S         Q  F       
Sbjct: 1050 LAFPAIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKN 1109

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1110 YERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRS 1169

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +     KD  + L  + K                           
Sbjct: 1170 RGFSRHIWYPDGLTLLHG---KDHSTKLLSEGK--------------------------- 1199

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVGC----- 1575
                    L  KT+ADV EALIG   + GG +    +  K +   V+S    V C     
Sbjct: 1200 ------HALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYI 1253

Query: 1576 --PSRPACVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQR 1628
               + P    E    S D  A  +E+ L   F    LL  AITH S PS+    V CYQR
Sbjct: 1254 TLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQR 1313

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  + LF  + +  P  L++ + A V+N+    ++VK   H  +   S+
Sbjct: 1314 LEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSN 1373

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
             L  QI  +V+E+          +   G C     L D+VE+  GAIF+DS  D  V+  
Sbjct: 1374 PLQAQITHYVEEI------ETAQAESQGAC-----LPDMVEAYLGAIFVDSKFDFQVIEA 1422

Query: 1749 VFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------- 1796
             F+    P  + M   +T    HP   L  +   +     Y   ++G L T++       
Sbjct: 1423 FFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNY-CLKAGELPTIDGAPATVL 1481

Query: 1797 --VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGT 1850
              V + G  +  A++   + A+  A+  ALAVL     +E  +K   + K+ KN +
Sbjct: 1482 AAVIVHGNVISEARSSSSRYAKIKASEKALAVLDGLLPSEFCQKYRCDCKETKNSS 1537


>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
 gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl-1; Includes: RecName:
           Full=ATP-dependent helicase dcl-1
 gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
          Length = 1584

 Score =  261 bits (668), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 217/705 (30%), Positives = 336/705 (47%), Gaps = 120/705 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNKKM---LAVFLVPK 360
           R YQ+++ E+AK++NTIA L+TG+GKTLIA +L+R  I  +L+ + K +   +A FLV K
Sbjct: 123 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVITGELEDREKGLPRRIAFFLVDK 182

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ   + +   + +   CGEM +       W+   +  +V+V TA+IL   L HS
Sbjct: 183 VALVFQQHSFLTKNLDFPMEKLCGEMVEGVESKAFWKEALEQNEVVVCTAEILSTALHHS 242

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+ INLLI DE HH  K HPY+ ++  FY     E+RP + G+TASPV+ K     V
Sbjct: 243 WIRMDQINLLIFDEAHHTKKDHPYARIIKNFYIDEQLERRPRILGLTASPVDAK-----V 297

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMP-SEVVVEY--DKAASLWSLHEQLKQME 537
           D       LE+ L S + T  D   L+  +  P +E+VVEY   +  S   L++QL+++ 
Sbjct: 298 DPRRAAAELEALLHSQIATAADPAALQHTICKPKTELVVEYVRGRPDSETVLNKQLRKL- 356

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
                                   G +E  +                  + L     A  
Sbjct: 357 -----------------------VGGQELFK------------------KPLNFTTSAAS 375

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
           +LG WCA +  Q F                 F++  + K+ S           +++D   
Sbjct: 376 KLGTWCADRYWQLF-----------------FKQEDIVKLESR----------TERDLMK 408

Query: 658 VDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
           V + +   E    ++ E  EL+++H  S          AA+    ++ KV  L++I L+ 
Sbjct: 409 VAALDEITEKHVKQVREAHELVNAHTFS---------PAALDPTMLSSKVIMLVRI-LRD 458

Query: 717 QHTEDF---RAIIFVERVVAALVL------PKVFAELPSLS--FVKSASLIGHNNSQEMR 765
           Q        R IIFV +   A++L      P++ + +PS++   +      G +      
Sbjct: 459 QFERGVGAQRCIIFVRQRNTAMLLADLLQQPEIKSHIPSIAAEVLVGGGTTGSSYVNAKI 518

Query: 766 TFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
            FQ Q   I KF+ G +  L ATSVAEEGLDI  CN+VIRFDL  T++  IQSRGRAR+P
Sbjct: 519 NFQQQNRIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQCIQSRGRARRP 578

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAV---- 878
            S YI MIE+GN  H + +  A+ +E+ LRK  EA+        K T   +++D +    
Sbjct: 579 DSRYIQMIEKGNYEHHSRILRAKGAEDVLRKFCEALPEDR----KLTGNHMNLDYLLRKE 634

Query: 879 -PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK 937
                Y V  TGA +S   ++  +  + + LP    + L PE+ +     PGG   + C+
Sbjct: 635 KGKRQYTVPDTGAKLSYMQSLVCLANFTATLPHPPETSLSPEYYIT--TVPGG---FQCE 689

Query: 938 LQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           + +P  +P +   G V  S  +A+ A     C  L + G   + L
Sbjct: 690 VVMPDASPIKSAVGKVHLSKGVAKCAAAFELCLALLKAGHLDNHL 734



 Score =  124 bits (310), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 234/593 (39%), Gaps = 119/593 (20%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGP--------------LEYSSYADYYK 1284
            +V      ++F+    R++M      P  +G + P              L YS+    + 
Sbjct: 921  VVDPYDGARKFFTHHRRHDMKPTDPVP--DGIVAPNHRAWRGLGTTHDILNYSN--SLWS 976

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLL--SPRFEHSEEQEGEGEEILDKTYYVFLPPELC 1342
            +  G  +    QP++    +S  ++ L  + R E  E Q+             FL  E  
Sbjct: 977  KSRGFMIFQADQPVVEAALISTRRDFLDDTLRDEDVEPQQ------------CFLILEPM 1024

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------ 1396
             I P+P  +V      PSI+ RVES L+A+     +   +     LEA T  S       
Sbjct: 1025 RISPIPADVVAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLALEAFTKDSDNSDEHD 1084

Query: 1397 --QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
              +E F       YER E LGD++LK   +  ++   P K E +    R  ++ N  L+ 
Sbjct: 1085 AEKENFQTGMGDNYERLEFLGDSFLKMATTIAIYTLIPDKGEFEYHVERMLLICNKNLFN 1144

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL+ YI++  F   +W   G++       K G S                     
Sbjct: 1145 NALEIGLEEYIRSMSFNRRQWYPEGLI------LKKGKSK-------------------- 1178

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVE 1567
                          D+    VL+ K++ADV EALIG  Y+ G  K + +  +K +   V+
Sbjct: 1179 --------------DARQRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVK 1224

Query: 1568 SDPEEV-------GCPSRPACVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHASR 1618
                 +           +P    ES   +    A    + +  KFK   LL  A  H + 
Sbjct: 1225 DKKHRMISYGDYYAVYQKPTWQTESANSAQRDMAKKFSERMGYKFKHPRLLRAAFQHPTY 1284

Query: 1619 PS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
            PS    +  YQRLEF+GDA+ D +   +LF  +    P  LT+ + A V+N+    ++  
Sbjct: 1285 PSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFH 1344

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEV---LEELLKPGFNSFGLGD-------------CKA 1720
               +  +   S ++ + I ++V E+   LE   +   N+    D              + 
Sbjct: 1345 LGFNKCIATMSPSILKDIAEYVTEIEEALETAKQEAINAGKTADEYSRDYWVHITHASRL 1404

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ----PLLDPMVTPETLP-MHPV 1768
            PK L D+VE+  GAIF+DS  D SVV   F     P  + M   +T    HPV
Sbjct: 1405 PKCLSDVVEAYIGAIFVDSEYDYSVVQNFFNMHVLPFFEDMHLYDTFANKHPV 1457


>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
 gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
          Length = 1546

 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 212/697 (30%), Positives = 326/697 (46%), Gaps = 116/697 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQ-RQNKKM--LAVFLV-- 358
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL+R +I N+L  R N K   ++ FLV  
Sbjct: 127 REYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVFV 186

Query: 359 --------------PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
                           V L YQQA V+R      V H+ G MG D WD + W +      
Sbjct: 187 LLALGRCILTWCKVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNM 246

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           V+V TA+IL   L +S ++M+ INLLI DE HHA K HPY+ ++ + Y      +RP VF
Sbjct: 247 VIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVF 306

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA 524
           GMTASP++ KG  ++    +    LE+ LDS + T      L + V  P E V  Y++  
Sbjct: 307 GMTASPIDTKGDITEAATYVLSRRLETFLDSRIATTSKITLLREVVSRPIEKVWAYNRL- 365

Query: 525 SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
                     +   A E           ++ M  R  G  + L  VY  +    S     
Sbjct: 366 ----------EPPFATE----------LYKLMDTR-YGNIKVLEGVYRFAWNASS----- 399

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
                        ELG+WC+    +++  AL +D               L K+       
Sbjct: 400 -------------ELGKWCS---DRAWWHALADD--------------VLPKL------- 422

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVAD----G 700
             EG ++K            +E  T + E G +    ++   E  + +      D    G
Sbjct: 423 --EGNINK-----------LIESNTMKAEHGAVFKD-IIRIREASETVKNYFFTDPELPG 468

Query: 701 KVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
           +++PKVQ L   L K +  T   + I+F ++   A +L ++F  L ++  ++   LIG  
Sbjct: 469 ELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVL-NIPNLRPGVLIGVR 527

Query: 760 NSQ---EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                    TF+ Q   + KFR G +  L ATSVAEEGLDI  CN+VIRFDL +T++ Y+
Sbjct: 528 PGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYV 587

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLI 873
           QSRGRAR   S Y +M+E+ N  H   L+  R +E  +R+  E +    + H  D     
Sbjct: 588 QSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGNDHDLDS 647

Query: 874 SVDAVPG-TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +    G   + V+STGA ++ +SA+ ++  Y S L  ++ ++ +  +++          
Sbjct: 648 FLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVT-----IASN 702

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
            Y C++ LP  +P   L G       +A+++     C
Sbjct: 703 AYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTC 739



 Score =  146 bits (369), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 160/596 (26%), Positives = 247/596 (41%), Gaps = 99/596 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   V   +NLL       +E + E           F+  E   I  LP S+V   
Sbjct: 1000 QPVLQAELVRLRRNLLDKMTTQEKEMQTE----------CFICAEPLRISALPPSIVSTC 1049

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R++S L+A++  D++   +     LEA T  S         Q  F       
Sbjct: 1050 LAFPAIISRLDSYLIALEACDELELVIRPDFALEAFTKDSDNTEEHRGQQIHFQRGMGKN 1109

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1110 YERLEFLGDCFLKMATSIALFSQNPNDDEFDYHVNRMCLICNKNLFNTAIKKQIYRYIRS 1169

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +     KD  + L  + K                           
Sbjct: 1170 RGFSRHIWYPDGLTLLHG---KDHSTKLLSEGK--------------------------- 1199

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVGC----- 1575
                    L  KT+ADV EALIG   + GG +    +  K +   V+S    V C     
Sbjct: 1200 ------HALGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYI 1253

Query: 1576 --PSRPACVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHASRPSSG---VSCYQR 1628
               + P    E    S D  A  +E+ L   F    LL  AITH S PS+    V CYQR
Sbjct: 1254 TLYTLPKYQTEKHRGSEDDLARHVEEELGYHFTYPRLLASAITHPSLPSTWGYRVPCYQR 1313

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  + LF  + +  P  L++ + A V+N+    ++VK   H  +   S+
Sbjct: 1314 LEFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSN 1373

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
             L  QI  +V+E+          +   G C     L D+VE+  GAIF+DS  D  V+  
Sbjct: 1374 PLQAQITHYVEEI------ETAQAESQGAC-----LPDMVEAYLGAIFVDSKFDFQVIEA 1422

Query: 1749 VFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------- 1796
             F+    P  + M   +T    HP   L  +   +     Y   ++G L T++       
Sbjct: 1423 FFERQIKPFFEDMSIYDTFANKHPTTFLHNKLTNEYGCTNY-CLKAGELPTIDGAPATVL 1481

Query: 1797 --VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGT 1850
              V + G  +  A++   + A+  A+  ALAVL     +E  +K   + K+ KN +
Sbjct: 1482 AAVIVHGNVISEARSSSSRYAKITASEKALAVLDGLLPSEFCQKYRCDCKETKNSS 1537


>gi|302819687|ref|XP_002991513.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
 gi|300140715|gb|EFJ07435.1| hypothetical protein SELMODRAFT_429800 [Selaginella moellendorffii]
          Length = 850

 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 209/725 (28%), Positives = 332/725 (45%), Gaps = 133/725 (18%)

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR-KPGS 826
            Q QE +  F  G++ LL+ATSVAEEGLD++ C  VIRFD+ +T+ +++QSRGRAR +  S
Sbjct: 25   QQQEVLDSFAGGKLNLLIATSVAEEGLDVQACCGVIRFDVCQTLQSHVQSRGRARNRLSS 84

Query: 827  DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG---TVY 883
             Y+ ++E GN+           SE  +  + I R  +         I+ +A P      +
Sbjct: 85   TYVWLLETGNVEQLNLFNQLCTSERVVEDQVIFRNYMD--------ITREAPPEGDLEFF 136

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            +VES GA  S   +V  IH YC++L  DRY   +P+F  +          + C ++ P N
Sbjct: 137  RVES-GACKSSQDSVSFIHEYCARL-GDRYYNAKPKFSFK--------DSFVCTVEFPPN 186

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAF-TDMLLPDKGSGEQQEKVDQNDEGE 1002
            AP   +EGP+  + +LA++A CL AC+KL++MG    D L PD    +++++  + +E  
Sbjct: 187  APLRSVEGPLRRTEQLAKKAACLQACRKLYDMGEVRPDTLCPDVDDFDEEDQSMRKNE-- 244

Query: 1003 PLPGTARHREFYPEGVADILQGEWILSGRDG-------C-----TGSKLFHLFMYTVKCV 1050
                + + +E +      I +G W+ +  +        C       S+ +  F + V CV
Sbjct: 245  ----SGKRKEIFSTAKPLIFEGSWVFNESEVQLQFYKICFVIEPPESRTYSNFGFLVNCV 300

Query: 1051 NNGISKDPFLTQVSDFAVLFSS-------ELDA-ELASLKNFHVRLMSIVLD----VDVE 1098
             +    D  +T  S   V+ +        +LDA ++ + K +   L++   +        
Sbjct: 301  IDAEVTDSEVTLFSRNRVVNARVHRVGPIQLDANQVKAAKAYQELLLNGAFNRLARCSGS 360

Query: 1099 PYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNE 1158
            P    W+ ++A+L +PV  D      + +DW  V               A   VY     
Sbjct: 361  PQEILWNKSQAFLLLPVHDDN-----DSIDWTSVH--------------ATAGVY----- 396

Query: 1159 RTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADM 1218
            RTL  +   +       G   G+K+H                               ADM
Sbjct: 397  RTLCSN---FSPSSPIDGDGVGEKTH-------------------------------ADM 422

Query: 1219 PTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSS 1278
                L  A+   ++  L+  +V   H+G+ F V  +    TA S  P K G+       +
Sbjct: 423  ----LCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLP-KRGF-------T 470

Query: 1279 YADYYKQKYGVELIFKKQPLIRGRGVSYCKNLL-SPRFEHSEEQEGEGEEILDKTYYVFL 1337
            Y DYYK KY   L    QPL++ +      NLL  P+ +H   QE           +V L
Sbjct: 471  YIDYYKDKYQRTLRLPDQPLLKAKPTHAFHNLLIRPKEDHGSRQEES---------FVEL 521

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQ 1397
            PPELC    +   L+R    +PS + +  S + AIQL+  +   +PA+KILEA+T+  C 
Sbjct: 522  PPELCLCLEIKSGLIRSLYFVPSFLHQFTSTVCAIQLRSPLWPWIPAAKILEAITSKKCH 581

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
            E F YE  ELLGD++LK+VV++ LFL Y +KHEGQL+  R    +   +    L++    
Sbjct: 582  EEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKNSILPTGLARACLP 641

Query: 1458 YIQAD 1462
             I  +
Sbjct: 642  LIHQN 646



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 126/267 (47%), Gaps = 46/267 (17%)

Query: 1609 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA-AVNN 1667
            ++EAIT  S+       Y+ LE +GD+ L +++T+ LF  Y     G+L+  R   A  N
Sbjct: 571  ILEAIT--SKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKN 628

Query: 1668 ----------------ENFARVAVKHKLHVHLR----------------------HGSSA 1689
                            +N +  +++HKL    +                      HGS  
Sbjct: 629  SILPTGLARACLPLIHQNASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVE 688

Query: 1690 LDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            LD +IR FV+ V E   KP  + F   D  +PKVLGD++ESI GAIF+D+  D   +W+V
Sbjct: 689  LDCEIRKFVQNVKE---KPDASCFD--DLSSPKVLGDLLESITGAIFVDTNFDLEKLWRV 743

Query: 1750 FQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQN 1809
              PLL P+VTP TL  HPVR L E C ++   + +  + +        + +   V  +Q 
Sbjct: 744  VLPLLSPLVTPATLRFHPVRILMELCARKGMKVSFFRTEATTTEVRVTFGEESLVETSQE 803

Query: 1810 PQKKMAQKLAARNALAVLKEKETAEAK 1836
              +K A+  AA   LA L+EK   E K
Sbjct: 804  KPRKSAKIDAALKMLASLQEKVEKEMK 830


>gi|158706448|sp|Q0UI93.2|DCL1_PHANO RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease DCL1; Includes: RecName:
           Full=ATP-dependent helicase DCL1
          Length = 1522

 Score =  261 bits (667), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 215/706 (30%), Positives = 340/706 (48%), Gaps = 109/706 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND-LQRQNK---KMLAVFLVPK 360
           R YQ+++  +AK +NTIA L+TG GKT IA LL+R +  + L+ + K     +A FLV  
Sbjct: 70  RDYQMELFLRAKMQNTIAVLDTGTGKTHIATLLLRHVLEEELENRAKGCAHKMAFFLVDS 129

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQA V+R      V    G MGQ  +  Q W + F    V+V TAQ+L++ + HS
Sbjct: 130 VNLVFQQANVLRCGLDQGVEGISGAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHS 189

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            + +  +NLLI DE HHA   HPY+ VM ++Y H     KRP +F MTASPV++KG S++
Sbjct: 190 FMSISRMNLLIFDEAHHAKSNHPYARVMKDYYAHELDTSKRPRIFAMTASPVDVKGQSAE 249

Query: 480 -VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLKQM 536
            V  A +   LE+ L S + T  D       +  P E V  Y +  + +   LH+++K  
Sbjct: 250 HVREAAR--ELETLLHSRIATTSDSALARNSITRPEEEVAVYTRLRNEFETPLHQKVK-- 305

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
                         +K+        G     R+++             +  KL A     
Sbjct: 306 --------------AKY--------GDVAPFRKLF-------------ITAKLHA----- 325

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD-- 654
            ELG+W A  +  SF  A +   +   + ++K+                     SK+D  
Sbjct: 326 SELGRW-ASDMYWSFAFADEQSRKLQIREELKYNR-------------------SKRDWS 365

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGA-AVADGKVTPKVQSLIKIL 713
           A  +D++   ++  T  +++ E                IGA  +++  ++ KV  L   L
Sbjct: 366 AAELDAQMARLKEATAFVQQYE----------------IGAPTLSEQDLSSKVMKLQYWL 409

Query: 714 -LKYQHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFVKSASLIGHNNSQEMRTFQMQ 770
            L Y+ T   R I+FVE+   A +L  +F  +  P+L       L+G NN        ++
Sbjct: 410 NLYYERTTLARCIVFVEKRHTAQLLKLIFDHIGGPNL---HCDVLVGINNRAGEENVSLR 466

Query: 771 E---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
               T+ KFR G +  L ATSVAEEGLDI QCN+V+RFDL +T++ Y+QSRGRAR   S 
Sbjct: 467 SQILTLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRNSK 526

Query: 828 YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT----SRLISVDAVPGTVY 883
           Y+ M+E  N  H   L NAR+ E  +R+   + T    L D     + LI+++      Y
Sbjct: 527 YLHMLEAENKEHTERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALEDKLFPSY 586

Query: 884 QVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIM--ERHEKPGGPTE--YSCKL 938
             E +GA ++  S++ ++  + +  PS D  ++ +P +++  +  + P  P    + C++
Sbjct: 587 TDEKSGAKLTYRSSLSILSHFVATYPSPDHNTMAQPTYVVNPKISDDPRDPQRNGFVCEV 646

Query: 939 QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            LP + P   + G V S   +A+ +     C +L       + LLP
Sbjct: 647 ILPEHCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLP 692



 Score =  149 bits (375), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 219/501 (43%), Gaps = 75/501 (14%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   + + +N L+   E  E++E    E        ++ PE   I  L    V   
Sbjct: 938  QPVLQVEKIPFRRNHLA-NVEDKEKKELANLE-------TYICPEPLHISNLATPFVVMC 989

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS------CQETFC-------- 1401
              LP+I+ R ES L+A+   D ++  V  +  LEALT  S       +E           
Sbjct: 990  YVLPAIIHRFESYLIALDACDVLDLKVSPALALEALTKDSDNSEEHGEEKINFKSGMGPN 1049

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL-SKGLQSYIQ 1460
            YER E LGD +LK   S  +F++ P+++E +    R  M+ N  L + A+  K L  Y++
Sbjct: 1050 YERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKLYKYVR 1109

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
             D F+   W   G+                         KL   K   + E+D +     
Sbjct: 1110 TDAFSRRNWYPEGL-------------------------KLLRGKGLKKTEEDWLNVTHN 1144

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVE---GGKDAAN---HLMKWIGIQVESD----- 1569
             GD         K++ADV EA IG  +++   GG+   N     +K + +   SD     
Sbjct: 1145 LGD---------KSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAVKLFANSDDHLME 1195

Query: 1570 --PEEVGCPSRPAC-VPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPS--SGV 1623
               +     ++P      +    +D  H +E     +F+   LL  A  H S+P     +
Sbjct: 1196 KWTDYYAAYTKPKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAFIHPSQPFMWENI 1255

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
              YQRLEF+GD++LD     HLF+ Y +  P  LT+ +   V+N+    V VK   H H+
Sbjct: 1256 PSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLGAVCVKLGWHTHM 1315

Query: 1684 RHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
            +  ++ L  QIRD+V EV E E    G   + +   + PK L D++E+   AIF+DS  D
Sbjct: 1316 KQNTAILSSQIRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEAFVAAIFVDSEFD 1375

Query: 1743 TSVVWQVFQPLLDPMVTPETL 1763
             +VV + F   L P     TL
Sbjct: 1376 FNVVQKFFDLHLKPFFLDMTL 1396


>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
 gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
          Length = 1928

 Score =  261 bits (666), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 228/755 (30%), Positives = 353/755 (46%), Gaps = 105/755 (13%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPKVP 362
            R YQ+++L++A K+N I  L TG+GKT IAVLLI+   + L    K     A FLV KV 
Sbjct: 16   RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTSKLVIPWKSGGKRAFFLVDKVS 75

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            LV QQA  I   T   VG   G + QD W +  ++       +V V+TAQI L++L H  
Sbjct: 76   LVGQQAAHIEHHTTLNVGKMHGHLNQDIWSEPAKFDAFIALHEVTVLTAQIFLDLLDHGF 135

Query: 422  IKMEAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
              M    ++I DECHH +  KHPY L+M  +   T  + RP + G+TAS ++ K   + +
Sbjct: 136  FNMSNAAVIIFDECHHVLGSKHPYRLIMHRYGQLTEVD-RPRILGLTASLISSKIPPNSL 194

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
            +  ++   LE  + S + T  D   + K+   P E V+        +    ++ +  V  
Sbjct: 195  EQLLE--KLERIMYSSIETASDLLSISKYGAKPKEYVI---MCHDFFCCSCEISKKVVDT 249

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
             E  ++   +   +F    D   +   + V     RT+S                L +LG
Sbjct: 250  LENLRTFCLKCT-EFHPEFDVDPR---KPVLEAVNRTKS---------------VLEQLG 290

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
             WCA+KV Q F   L+      +  +         K V  LQ        +K+       
Sbjct: 291  PWCAWKVCQLFQRQLKKHSGQGFLPE---------KQVIFLQMAYTTMRFTKR------- 334

Query: 661  ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP-KVQSLIKILLKYQHT 719
                            LLD+ V S     D+          + P ++  L +IL  Y  +
Sbjct: 335  ----------------LLDAKVASVRCFNDM--------KPILPDRLSRLFEILKFYSPS 370

Query: 720  E--------DFRAIIFVERVVAALVLPKVFAELP-----SLSFVKSASLIGHNNS----- 761
                      F  I+FVE+   A VL  +   +         ++ S  +IG+N++     
Sbjct: 371  NMEKVDPDFTFCGIVFVEQRYVAYVLNTLIRAISRWDSDKFGYLVSDFIIGYNSANISAE 430

Query: 762  QEMRTFQMQETIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
            + M   + QE +  KFR   + LL+ATSV EEG+D+RQCNVVIRFD      AY+QS+GR
Sbjct: 431  ETMALHKRQELVLRKFRQRHLNLLIATSVLEEGVDVRQCNVVIRFDRPTDYRAYVQSKGR 490

Query: 821  ARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
            ARK G+ Y L++E  +    +  R+ ++  +  R       ++ +  + +   S++A+  
Sbjct: 491  ARKDGASYFLLVEERDREQCS--RDLKDFLQIERMLLKRYQNVHNPPEPTISPSIEAMDD 548

Query: 881  TV--YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
             +  Y VESTGA V+L SA+GL++ YC++LPSD ++ L P+  +   E  G    Y  +L
Sbjct: 549  IIAPYTVESTGAQVTLTSAIGLVNRYCAKLPSDIFTRLVPQNTIV-PETVGDHVMYRAEL 607

Query: 939  QLPCNAPFE---KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             LP N+P +   KL+ P+  S +LAQ AV L AC++LH+     D LLP          +
Sbjct: 608  LLPINSPIKETIKLKKPL-GSKKLAQMAVALEACRRLHKRKELNDYLLPVGKDTIMLTAL 666

Query: 996  DQNDEGEPLP------GTARHREFYPEGVADILQG 1024
            D+ D  E +P      G+AR R+ Y + +A  L  
Sbjct: 667  DE-DPDEFIPNMNYKVGSARRRQLYDKRMAKALHN 700



 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 248/522 (47%), Gaps = 66/522 (12%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V    +L+ALT ++  +    ER E +GD++LK+ V+ +LF   P++HEG+L+  R + V
Sbjct: 1407 VSPCTLLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEV 1466

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPV----------------FDEDTKD 1484
            SN  LY+      L S I   +F P+  W  P   P                 F E+  +
Sbjct: 1467 SNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFIENVLE 1526

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYN-----------EYEDDDME--DGE----LEGDSSSY 1527
            G +    +   V       D+N             E+  + +   DGE    L  +  + 
Sbjct: 1527 GKTVERQEPVRVPTGWDEADRNSQVRRIADGIETIEFPKNMITSWDGEEITPLPYNLLTQ 1586

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP----SRPACVP 1583
            + L  K++AD VE+LIG + +E G  A    MKW+G++V ++P +V  P          P
Sbjct: 1587 QSLGDKSIADAVESLIGAHLLELGPTATLRFMKWLGLKVLTEPVQVEPPLLRFIDTTEQP 1646

Query: 1584 ESVLRSVD-------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
            +  LR ++       F  LED +  +F DR  L++A THAS   + ++ CYQRLEF+GDA
Sbjct: 1647 DKSLRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGDA 1706

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD++IT+ LF   ++  PG LTDLR+A VNN  FA +A+KH  H H       L   I 
Sbjct: 1707 VLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKHFIAMCPRLHHMIE 1766

Query: 1696 DFVKEVLEE-LLKPGFN-------------SFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
             FV    E+ L    FN                  D + PK +GDI ES+AGAI+LDSGR
Sbjct: 1767 KFVCLCTEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSGR 1826

Query: 1742 DTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
               +VW+VF  L+   +       P  P+REL E   ++A   + +         V V I
Sbjct: 1827 SLDIVWRVFYNLMKETIDECCSNPPRSPIRELLEMEPERARFSKLERILETGKVRVTVDI 1886

Query: 1800 DGVQVGVAQNPQKKMAQKLAARNALAVL----KEKETAEAKE 1837
             G           ++A+  AA+ AL  L    KEKE A  K+
Sbjct: 1887 QGKCRFTGMGRSYRIAKCTAAKRALRYLRSLKKEKERAAGKQ 1928



 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRF---EHSEEQEGEGEEILDK 1331
            +++++ DY+ QKYG+ +  ++QPL+     S   NLL PR      +   E  G E    
Sbjct: 907  KFATFNDYFIQKYGIVIYDQEQPLLDVDYTSSRLNLLMPRHWSRSRNRTTEERGSESGGM 966

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            +    L PEL  +HP+  SL      LP+++ R+ S+LLA +L++ I
Sbjct: 967  SQGQILVPELVDVHPIAASLWNVIAALPTLLYRINSLLLADELRELI 1013



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 1362 MRRVESMLLAIQ---LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLK 1414
            +R++  + +  Q   L+D I Y     + +L+A T AS  +   T CY+R E LGDA L 
Sbjct: 1650 LRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLD 1709

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            +V++RFLF        G LT +R  +V+N +    A+      +  A
Sbjct: 1710 YVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKHFIA 1756


>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
          Length = 1883

 Score =  260 bits (665), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 220/753 (29%), Positives = 366/753 (48%), Gaps = 76/753 (10%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ---RQNKKMLAVFLVPKV 361
            R YQ+++LE A + NTI  L +G+GKT IAVLL + + + ++   R+  K   VFLV   
Sbjct: 35   RKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGCYREAAKR-TVFLVNTA 93

Query: 362  PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
              V +QA  +R  +   VG Y  ++ +  W  QRW +E    QVLVMT  I L IL+  I
Sbjct: 94   ASVAEQAAAVRTHSDLQVGEY-SDLEKMTWTDQRWSQEMTENQVLVMTCHIFLYILKRQI 152

Query: 422  IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
            + +  INL++ D+CH A+  HPY  +M  F   T+    P + G+TAS +N K   S+++
Sbjct: 153  LLLSKINLVVFDDCHLAIADHPYCEIMKYFEGVTNS---PRILGLTASILNGKCDPSELE 209

Query: 482  CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSLHEQLKQMEV 538
               KI NLE  L S   T  D   L+++   P E+V++   Y   + L S      +++ 
Sbjct: 210  --EKIQNLERTLKSNAETATDLVVLDRYASQPREMVLDCGPYVDKSGLCS------RLQA 261

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
             ++EA +         F+G  +     E      +S++  +D  A            L  
Sbjct: 262  ELDEALR---------FLGDCNICVTREDHNPTFISKQVLADCLA-----------VLQV 301

Query: 599  LGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK- 653
            LG WCA K A   +  LQ    +++    +  + F ++ L KV +L +      ++  K 
Sbjct: 302  LGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRKVHALCEEHFSPTSLDLKF 361

Query: 654  -DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
               KV+       E    E ++ E ++ +     ++      +   D     + +   + 
Sbjct: 362  VTPKVLRLLEILREYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEDVEAKERPEA 421

Query: 713  LLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--------NN 760
                  T     IIFVER   A+VL ++  E     P L+++ S  + GH        N 
Sbjct: 422  NFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKYQLRNK 481

Query: 761  SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
              E+   + +E + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GR
Sbjct: 482  QMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR 541

Query: 821  ARKPGSDYILMI--ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            AR P S+YI++   ER  +     L   +  E+ LR +  +  ++S  +          +
Sbjct: 542  ARAPVSNYIMLADSERTKVFKED-LSTYKAIEKILRNKCSKSVEVSEFEVEQVFDDDYII 600

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  V + E  G  V++N+A+G I+ YC++LPSD ++ L P+   +  E   G   +  +L
Sbjct: 601  PPYVLRSEDGGPRVTVNTAIGHINRYCARLPSDPFTHLAPK--CKTVEIQSG--LFQSRL 656

Query: 939  QLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             LP N+P    ++GP+ + +RLA++AV L  C+KLH++G   D L+P    G++  K ++
Sbjct: 657  YLPINSPLRIPVKGPIMNCIRLAEKAVALLCCEKLHKIGELDDHLMP---VGKETVKYEE 713

Query: 998  NDEGEPL--------PGTARHREFYPEGVADIL 1022
              +            PG+ + R+ YP+ + + L
Sbjct: 714  ELDLHDEEETSVPGRPGSTKRRQCYPKAIPECL 746



 Score =  167 bits (422), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 202/414 (48%), Gaps = 58/414 (14%)

Query: 1472 PGVLPVFDEDTKDG------DSSLFDQEKSVAEDKLGTDKNY-----NEYEDD---DMED 1517
            P  +P   E    G      D S +D    +   K G ++++     N  E++   D+  
Sbjct: 1468 PTTVPYHTESVSSGPSAEEFDYSSWDAMCYLDPSKAGDEEDFVVGFWNPSEENLGVDLGK 1527

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS 1577
              +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V   P E G  +
Sbjct: 1528 QTISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVL--PLEEGVVT 1585

Query: 1578 RP----------ACV------PESVLRSVD-----------FHALEDALKIKFKDRGLLV 1610
             P           C       P S+L   D           F   E  +   F+++  L+
Sbjct: 1586 GPRRSHGTTAVDLCYGWLKIPPRSMLDHPDAEHTLHHLISGFENFERKINYTFQNKAYLL 1645

Query: 1611 EAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            +A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  
Sbjct: 1646 QAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTI 1705

Query: 1670 FARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKA 1720
            FA +AVK+  H + +  S  L   I DFV+  LE         EL +   +     D + 
Sbjct: 1706 FASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEV 1765

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQ 1778
            PK +GDI ES+AGAI++DS      VWQ++ P++ P++      +P  PVREL E   + 
Sbjct: 1766 PKAMGDIFESLAGAIYMDSRMSLETVWQIYYPMMRPLIEKFSANVPRSPVRELLEMEPET 1825

Query: 1779 AEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1826 AKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1877



 Score = 80.5 bits (197), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 933  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 985

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 986  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1042

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1043 LPSILYRLHCLLTAEELR 1060



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 3/121 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1263 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1322

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+    KGL S +    F  P  W  PG   + +++  + D     +E++++  + G D 
Sbjct: 1323 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--IVNQEKSNNDKLDCAEEENLSNGQSGNDY 1380

Query: 1506 N 1506
            N
Sbjct: 1381 N 1381



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1261 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1318

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1319 NCNLYRLGKKKGL 1331



 Score = 48.5 bits (114), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 1377 KINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
            KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q   G 
Sbjct: 1633 KINYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1692

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            LT +R  +V+N +    A+      Y +A
Sbjct: 1693 LTDLRSALVNNTIFASLAVKYDYHKYFKA 1721


>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 1516

 Score =  260 bits (664), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 203/729 (27%), Positives = 341/729 (46%), Gaps = 103/729 (14%)

Query: 272 NRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKT 331
           NR GK  +G+++E +       + ++    +  R YQ+++ E+AK++NTIA L+TG+GKT
Sbjct: 38  NRDGKPKSGLDEEQSVHSLLAQQQRDTQIVKNPREYQIELFERAKQENTIAVLDTGSGKT 97

Query: 332 LIAVLLIRSICN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMG 387
           LIAVLL+R I +    +  + ++  ++ FLV  V LVYQQ  V+     + V   CG   
Sbjct: 98  LIAVLLLRWIIDHEIENRAKGSQAKISFFLVASVTLVYQQFAVLETNLDHKVARLCGADN 157

Query: 388 QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLV 447
            D WD  RW +E    + +V TA+IL   L    + M+ INLLI DE HH  K H Y+ +
Sbjct: 158 TDRWDKTRWMKECYENKAIVCTAEILFQALSFGYLTMKQINLLIFDEAHHTKKNHSYARI 217

Query: 448 MSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELE 507
           + +FY       RP +FGMTASP++ K     +D       LE+ LDS + T  D   L 
Sbjct: 218 IKDFYLEEEVHDRPRIFGMTASPIDAK-----MDVIQAAHELEALLDSKIATTSD-MSLS 271

Query: 508 KHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEEL 567
             +  P E ++ Y               +  A  E     + R+++            ++
Sbjct: 272 SAIKKPKEQIMRY-------------PSLPQAGFETPLLQAVRARYS-----------DM 307

Query: 568 RQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQL-- 625
            Q   +  R     AA + +           LG WCA       L  L +++   Y+L  
Sbjct: 308 TQFTKIFTR-----AAEVAR----------HLGSWCA---DFYLLDCLSDEKSKRYKLAA 349

Query: 626 DVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSG 685
           + KF      + V+ L   L          K +D+   F +      E   +LD+ +   
Sbjct: 350 EQKFHARNAGREVAALDRAL----------KRIDAAVAFAQ------EHRNILDTEITR- 392

Query: 686 GEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAEL 744
                          +++ KV  L + L  +++     R I+FV++   A +L  +F  +
Sbjct: 393 --------------DRISSKVYELYRYLAEQFERPSSNRCIVFVDKRYTARLLNSLFQRI 438

Query: 745 PSLSFVKSASLIGHNNS-QEMRTFQMQETIA---KFRDGRVTLLVATSVAEEGLDIRQCN 800
            S   +KS  LIG  N+ Q+   F  ++ +    KFR G +  L ATSVAEEGLD+  CN
Sbjct: 439 KS-PHMKSTFLIGSGNTGQDEDNFSFRQQVMVLLKFRKGDLNCLFATSVAEEGLDVPDCN 497

Query: 801 VVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
           ++IRFD+  T++ Y+QSRGRAR   S +I M+E GN  H   +   R +E ++R    + 
Sbjct: 498 LIIRFDMYATMIQYVQSRGRARNQNSKFIHMVENGNSIHKETVNEVRYAELSMRAYCDQL 557

Query: 861 TDLSHLKDTSRLISVDAVPGTVYQVE-----STGAVVSLNSAVGLIHFYCSQLPSDRYSI 915
            +   L+  S   S++A+      +E      + A ++  +A+ ++  + S +P+D + +
Sbjct: 558 PEDRKLQGNSD--SIEALMERERNMEVRVDPVSKAKLTYGNALNILATFVSAIPTDGHEM 615

Query: 916 LRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEM 975
             P +++    +     ++ C++ LP N+P   + G V     LA+++    A  +L + 
Sbjct: 616 QHPTYVVSSRGQ-----KFVCEVVLPGNSPLRSMIGKVHQKKTLAKRSAAFEAVIELRKK 670

Query: 976 GAFTDMLLP 984
               + L+P
Sbjct: 671 SWINENLMP 679



 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 204/494 (41%), Gaps = 78/494 (15%)

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            + QP++    V   +N+L+P     E++E      L      ++ PE   I  +  ++  
Sbjct: 926  QNQPVVEADIVLQRRNMLAP----PEQKE------LAPVTKAYIVPEPLRISAITPNVAA 975

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE---------TF---- 1400
                 P+I  R ES L++I+  + +         L A T  S  +          F    
Sbjct: 976  SCFVWPAIAHRFESCLISIEGCEAVGVTCGPEFALAAFTKDSDNQGEHEAEERVNFQRGM 1035

Query: 1401 --CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
               YER E +GD +LK   +   F+  P ++E +    R  M+ N  LYQ AL   L  Y
Sbjct: 1036 GENYERLEFIGDTFLKTATTISTFIMNPNENEFEFHVRRMLMLCNKNLYQTALQLKLYEY 1095

Query: 1459 IQADRFAPSRWAAPGV-LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            I++  F    W   G+ L V     K  +  ++ + + V                     
Sbjct: 1096 IRSLAFNRRYWYPEGLKLLVGTGVVKGQEKEMYHEPREVG-------------------- 1135

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYV-----------EGGKDAANHLMKWIGI-- 1564
                        L  KT+ADV EALIG  Y+           E  +DA   + K +    
Sbjct: 1136 ------------LGEKTIADVCEALIGAAYLSHDKPGEAWEPEHWRDAVRAVTKLVKSDD 1183

Query: 1565 -QVESDPEEVGCPSRPAC-VPESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHASRPS- 1620
             ++++  + +    +PA    ES     D    +E      F    LL  A  H S P  
Sbjct: 1184 HKMQTWQDYIDAYDKPAYQTGESTAVQKDLALRVEKEHAYTFTYPRLLYSAFMHPSVPYM 1243

Query: 1621 -SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
               V  YQRLEF+GDA+LD     +LF+ Y +  P  LT+ + A V+N+    + V    
Sbjct: 1244 YEKVPSYQRLEFLGDALLDMASITYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVDIGF 1303

Query: 1680 HVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFL 1737
            H HLRH  + L+ Q+RD+  E+LE   +   G   +       PK L DIVE+  GA+F+
Sbjct: 1304 HKHLRHHHATLEHQVRDYATELLEAKRIAGKGCVDYWTTVSDPPKCLPDIVEAYIGAMFI 1363

Query: 1738 DSGRDTSVVWQVFQ 1751
            DS  D + V + F+
Sbjct: 1364 DSNFDYNQVQRFFE 1377


>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
 gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1586

 Score =  260 bits (664), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 212/701 (30%), Positives = 329/701 (46%), Gaps = 112/701 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK++NTIA L+TG+GKTLIA +L+R + N    D ++   + +A FLV K
Sbjct: 123 REYQVELFERAKQQNTIAVLDTGSGKTLIAAMLLRWVINGELEDREKGFPRRIAFFLVDK 182

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ   + +   + +   CGEM +       W+   +  +V+V TA+IL   L HS
Sbjct: 183 VALVFQQHSFLTKNLDFPMEKLCGEMMEGVESKAFWKEALEHNEVVVCTAEILNTALHHS 242

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+ INLLI DE HH  K HPY+ ++  FY     E+RP + G+TASPV+     + V
Sbjct: 243 WIRMDQINLLIFDEAHHTKKDHPYARIIKNFYVDEKLERRPRILGLTASPVD-----ANV 297

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMP-SEVVVEYDKAA--SLWSLHEQLKQME 537
           D       LE+ L S + T  D   L+  +  P +E++VEY +    S  +L++QL+++ 
Sbjct: 298 DPGRAAAELEALLHSQIATAADPASLQPKICRPKAELLVEYARGRPDSETALNKQLRKL- 356

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
                                   G +E  ++    +    S                  
Sbjct: 357 -----------------------VGGQELFKKPVNFTTSAAS------------------ 375

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
            LG WC  +  Q +    Q D     +L+ +  E  L K  +L       G +++K+ K 
Sbjct: 376 TLGPWCVDRYWQLYFK--QED---IVKLEAR-TERDLMKASAL-------GEITEKNVKQ 422

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
           V   +             EL+++H           + AA+     + KV  L++IL    
Sbjct: 423 VRDAH-------------ELVNAH---------TFLPAALDPAMFSDKVIMLVRILRDQF 460

Query: 718 HT--EDFRAIIFVERVVAALVL------PKVFAELPSL--SFVKSASLIGHNNSQEMRTF 767
            T     R I+FV +   A++L      P + + +PS+    +      G         F
Sbjct: 461 ETGVGTQRCIVFVRQRNTAMLLADLLQQPGIKSHIPSIVAEVLVGGGTTGSGYVNAKVNF 520

Query: 768 QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
           Q Q   I KF+ G +  L ATSVAEEGLDI  CN+VIRFDL  T++ YIQSRGRAR+P S
Sbjct: 521 QQQNRIIRKFKLGEINCLFATSVAEEGLDIPDCNIVIRFDLYDTLIQYIQSRGRARRPDS 580

Query: 827 DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV-----PGT 881
            YI MIE+GN  H T +  A+ +E+TLR       +   L D    +++D +        
Sbjct: 581 RYIQMIEKGNPEHYTKIVQAKKAEDTLRNFCKALPEDRKLTDNH--MNLDYLLRKEKGKR 638

Query: 882 VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            Y V  TGA +S   ++  +  + + LP    + L PE+ +     PGG   + C++ +P
Sbjct: 639 QYTVPETGAKLSYMQSLICLANFTATLPHPPETSLSPEYYIT--TVPGG---FQCEVVMP 693

Query: 942 CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
             +P +   G +  S   A+ A     C  L + G   + L
Sbjct: 694 DASPIKSAVGKIHVSKGAAKCAAAFELCLALLKAGHLDNHL 734



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 225/583 (38%), Gaps = 126/583 (21%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGP--------------LEYSSYADYYK 1284
            IV      ++F+    R++M      P  +G + P              L YS+    + 
Sbjct: 921  IVDPYDGARKFFTRHRRHDMKPTDPVP--DGIVQPNHRAWKGLGTTHDILNYSN--SLWA 976

Query: 1285 QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCF- 1343
            +  G  +    QP++  R +S  ++ L              + ILD+     L P+ CF 
Sbjct: 977  KSRGFMVFQADQPVVEARLISTRRDFLD-------------DAILDED----LEPQPCFL 1019

Query: 1344 ------IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC- 1396
                  I P+P  +       PSI+ RVES L+A+     +   +     LEA T  S  
Sbjct: 1020 ALEPLRISPIPADVAAMLLCFPSIIHRVESNLVALDACKLLGLDLRPDLALEAFTKDSDN 1079

Query: 1397 -------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
                   Q  F       YER E LGD++LK   +  ++   P K E +    R  ++ N
Sbjct: 1080 SNEHDVEQVNFQTGMGDNYERLEFLGDSFLKMATTMSIYTLIPDKGEFEYHVERMLLICN 1139

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
              L   AL  GL+ YI++  F   +W   G++                         L  
Sbjct: 1140 KNLLNNALEVGLEEYIRSMSFNRRQWYPEGLV-------------------------LKK 1174

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWI 1562
             KN                D+ +  VL+ K++ADV EALIG  Y+ G  K + +  +K +
Sbjct: 1175 GKN---------------KDARTRHVLADKSIADVCEALIGAAYLTGQEKGSFDMAIKAV 1219

Query: 1563 GIQVESDPEEVGC----------PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
               V      +            PS       S  R +      + +  KFK   LL  A
Sbjct: 1220 TAMVRDKKHRMMNYGDYYAVYQKPSWQTAPANSAQRDMA-DKFSERMGYKFKHPRLLRAA 1278

Query: 1613 ITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
              H + PS    +  YQRLEF+GDA+ D +   +LF  +    P  LT+ + A V+N+  
Sbjct: 1279 FQHPTYPSLYERLPSYQRLEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFL 1338

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC------------ 1718
              ++     +  +   S ++ + I ++V E+ E L      +   G              
Sbjct: 1339 CCLSYHLGFYKCVATMSPSILKDIAEYVTEIEEALEAAKQEAVNQGKAPEEYSRDYWVHI 1398

Query: 1719 ----KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
                + PK L D+VE+  GAIF+DS  D SVV Q F   + P 
Sbjct: 1399 THVSRLPKCLSDVVEAYIGAIFVDSEYDYSVVQQFFTTHVLPF 1441


>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
 gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
          Length = 1519

 Score =  259 bits (663), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 201/677 (29%), Positives = 318/677 (46%), Gaps = 99/677 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E++K+KN IA LETG+GKTLIAVLL++ +      D        ++ FLV  
Sbjct: 112 REYQLELFEKSKEKNIIAVLETGSGKTLIAVLLLKHVIEQELTDRSLGLPPRISFFLVDS 171

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W+ + W+  F    V+V TA++L   L HS
Sbjct: 172 VTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHS 231

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+++ INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V
Sbjct: 232 FIQIDQINLLIFDEAHHAKKEHPYARIIKDFY-LKEPERKPKIFGMTASPVDAK-----V 285

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +       LE+ LDS + T  +   L + V  P+E + EYD             ++E+  
Sbjct: 286 EVVGAAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYD-------------RLELPF 332

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E       R+ + +F      G  + L +++  S  T S                   LG
Sbjct: 333 ETPLY---RKLRQKF------GDIKVLEKIFKFSRETSSS------------------LG 365

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            WC+  +    L+     E    +L+ +     +  + +   C+     + +  A + + 
Sbjct: 366 SWCSDWIWSYCLS-----EETLPKLEARSNRPLMKSIPNQPSCDTEAERIREAGAIIKEH 420

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
           E G      + +   ELL   V+   + +                         +++   
Sbjct: 421 EFG------DPVANPELLSRKVLLLRDQLLR-----------------------RFKENP 451

Query: 721 DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMR----TFQMQ-ETIAK 775
           D R I+F  +   A +L  +F ++ S  +++   L+G  +  +      +F+ Q   +  
Sbjct: 452 DTRCIVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDKIGLDISFREQFLNVIA 510

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G +  L ATSVAEEGLDI+ CN+++RFDL  T++ YIQSRGRAR   S +  M+ER 
Sbjct: 511 FRKGEINCLFATSVAEEGLDIQDCNLIVRFDLYSTLIQYIQSRGRARHMESTFAHMVERN 570

Query: 836 NLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
           NL H T +   R SEE L    K   E   L    D   +I  D    + Y ++STGA +
Sbjct: 571 NLMHETAVEEVRRSEEVLTRFCKSLPEDRLLKGTGDIDMMIEKDRQQKS-YTIKSTGAKL 629

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           +  S++ ++  Y S L  ++    +  +I+  H K G    + C+  LP  +P     G 
Sbjct: 630 TYPSSLAVLAHYASTLQYEKELSTQVSYII--HPKDGA---FICETILPEKSPIRGCMGK 684

Query: 953 VCSSMRLAQQAVCLAAC 969
             S   LA+Q+     C
Sbjct: 685 SASRKLLAKQSAAFETC 701



 Score =  157 bits (398), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 231/524 (44%), Gaps = 83/524 (15%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------CYE 1403
             P+++ R+ES L+A++  + +   +P    LEALT  S         Q  F       YE
Sbjct: 1014 FPAMIWRMESYLIALEACENLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYE 1073

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF   P   E      R  ++ N  L+  A++  +  +I++  
Sbjct: 1074 RLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAINLEIFKFIRSRS 1133

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +  +D K                                     EG 
Sbjct: 1134 FSRRAWYPEGLTLLKGKDKK-------------------------------------EGP 1156

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPSRP 1579
            +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V      SR 
Sbjct: 1157 NGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYSRL 1216

Query: 1580 ACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPS--SGVSCYQRLEF 1631
              +P     S     ++ A +I+      FK   LL  A  H S PS  + V CYQRLEF
Sbjct: 1217 YSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEF 1276

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S+ L 
Sbjct: 1277 LGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQ 1336

Query: 1692 RQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             QI  + +E+  ++  ++    ++   + + PK L DIVE+  GAIF+DS  +  VV   
Sbjct: 1337 GQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAIFVDSNFNFDVVDDF 1395

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN----LAT 1794
            F    Q   + M   +T    HP+  L  R      C   A   +      G     LA 
Sbjct: 1396 FRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVRALAA 1455

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            V V+ D V  GVA +P  + A+  A++NAL +L+E   A+ + K
Sbjct: 1456 VCVHDDIVAEGVASSP--RHAKLKASQNALQILEEMSAADFRAK 1497


>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
          Length = 1533

 Score =  258 bits (660), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 214/690 (31%), Positives = 314/690 (45%), Gaps = 113/690 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVPKVPL 363
           R YQL++ E+AK++N IA L+TG+GKTLIAVLL++ +   +L+ +     A+   P++  
Sbjct: 110 REYQLELFERAKQENVIAVLDTGSGKTLIAVLLLKHVIEKELEDR-----ALGKTPRISF 164

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
             +            V  +CG M  D W  Q W + F    V+V TA++L   L HS I 
Sbjct: 165 FLK------------VERFCGAMQCDLWSKQTWAKHFIQNMVIVCTAEVLAQCLMHSFIN 212

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
           ME INLL+ DE HHA K H Y+ ++S++Y  T   KRP VFGMTASPV+ K     VD  
Sbjct: 213 MEQINLLVFDEAHHAKKGHSYAKIISDYYIPTEDSKRPKVFGMTASPVDAK-----VDVV 267

Query: 484 IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
               +LE  L   + T  +   L K +  P E VVEY   A L +  E     E+     
Sbjct: 268 QAASDLEKFLQCRIATTANPDLLRKTISRPHEEVVEY---APLQTPFETTLYKEM----- 319

Query: 544 AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
                 R K+     RD  A   L Q                     +   A  ELG WC
Sbjct: 320 ------RDKF-----RDVRAFHALFQ---------------------SSKEATSELGPWC 347

Query: 604 AYKVAQSFLTALQNDERANYQL--DVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSE 661
           +      +  ALQ +E  N +   +  F      K +S L  E+   A  ++ +K+V + 
Sbjct: 348 S---DMYWFFALQEEEAKNLESREEQAFHRDKKRKPISSLDEEM---AKLREASKIVQNH 401

Query: 662 NGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
                  T      ++L+ H                              +L  ++   +
Sbjct: 402 PFGEPRPTLTYLSSKVLELHTW----------------------------LLRYFERQTN 433

Query: 722 FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE---TIAKFRD 778
            R I+FV+R   A +L +VFA +    ++KS  +IG+++         +E   T+ +F+ 
Sbjct: 434 SRCIVFVQRRHTARILHQVFASIGG-PYLKSGMIIGNSSRASGLNISFREQVMTLLRFKK 492

Query: 779 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
           G +  L ATSVAEEGLDI  CN+VIRFDL KT++ Y+QSRGRAR   S Y+ M+E GN+S
Sbjct: 493 GELNCLFATSVAEEGLDIPNCNIVIRFDLYKTMIQYVQSRGRARHKNSRYLHMVEEGNIS 552

Query: 839 HATFLRNARNSEETLRK--EAIERTDL--SHLKDTSRLISVDAVPGTVYQVESTGAVVSL 894
           H   +  AR +E  +R+  E++    L   H  D   L        T  +  +   +   
Sbjct: 553 HRQTVLEARQAERLMREFCESLPENRLLKGHGADLDDLTFEREFFRTYTEPSTRAKLTYD 612

Query: 895 NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVC 954
           NS V L HF  + LP        P +IM          E+ C++ LP N+P     G   
Sbjct: 613 NSLVILAHF-TAALPCKGDVSSDPLYIMSSER-----GEFLCEVILPENSPVPSARGRPA 666

Query: 955 SSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           SS  +A+++     C +L E     + LLP
Sbjct: 667 SSKAVAKRSAAFELCIRLREKDYLDENLLP 696



 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 228/556 (41%), Gaps = 87/556 (15%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFP-------RKEGYLGPLEYSSYADYYKQKY 1287
            L   +V     G+RF+ E I   +      P       + E     L YS  + Y   + 
Sbjct: 877  LNKYLVDKWDGGRRFFTECINPNLKPTDPVPDDAVTAKKPEQRKDILNYS-ISLYKGSRE 935

Query: 1288 GVELIFKK-QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHP 1346
              +L + + QP++  R V + +N+L+      E QEG      D    V+L PE   I  
Sbjct: 936  KQDLNWNRGQPVVEARQVQHRRNMLA----EPERQEG------DFRSKVYLCPEPLKISA 985

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQ--------E 1398
            L  + V     LP+++ R E  L+A++    +   +     LEA+T  S          +
Sbjct: 986  LRPAAVASIYVLPAVIHRTEQYLIALEACQLLGLDIAPDLALEAVTKDSDNTEKHNEEAQ 1045

Query: 1399 TF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
             F       YER E +GD +LK   S  LF + P  +E      R  ++ N  L+  A  
Sbjct: 1046 NFRRGMGNNYERLEFMGDCFLKMGTSIALFSQNPDDNEFDFHVKRMCLICNQNLFDTAKR 1105

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              L  Y+++  F+   W   G+                         K+   K + +  D
Sbjct: 1106 IELTKYVRSMAFSRRTWYPEGL-------------------------KMLEGKGHKKTGD 1140

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV----------EGGKDAANHLMKWI 1562
            + M+             LS KT+ADV EALIG  Y+          E   +A   +   +
Sbjct: 1141 EVMKHS-----------LSDKTVADVCEALIGAAYLTHNTPGKWLPENWDNAVRAVAALV 1189

Query: 1563 GIQ---VESDPEEVGCPSRPACV-PESVLRSVDF-HALEDALKIKFKDRGLLVEAITHAS 1617
              +   + S  E      +P+ +  E+    +D     E     +F+   LL  A  H S
Sbjct: 1190 SSENHAMASWSEYFSAYKKPSYLDAEATAAQIDLVKQAEKEHPYRFRSAKLLRSAFMHPS 1249

Query: 1618 RPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
             P +   V  YQRLEF+GD+++D      L + + +  P  LT+ + A V+N+    V V
Sbjct: 1250 YPFNYEKVPSYQRLEFLGDSLIDTACITWLIYKFPDKDPQWLTEHKMAMVSNKFLGAVCV 1309

Query: 1676 KHKLHVHLRHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLGDIVESIAGA 1734
            K   H HL++  S ++ QIRD+V E+ E E    G   +       PK L DIVE+  GA
Sbjct: 1310 KLGFHKHLKYSYSQMEYQIRDYVTELREAERESKGARDYWTTVKSPPKCLPDIVEAYVGA 1369

Query: 1735 IFLDSGRDTSVVWQVF 1750
            +F+DS  + + V   F
Sbjct: 1370 LFVDSEYNFAKVEMFF 1385


>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1494

 Score =  258 bits (660), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 215/701 (30%), Positives = 330/701 (47%), Gaps = 110/701 (15%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFL 357
           E  R YQ+++ E+AK +NTIA L TG+GKTLIA+LL++ I      D  R  +  ++ FL
Sbjct: 79  EDPRDYQIELYERAKHENTIAVLATGSGKTLIAILLLKHIIQNELIDRGRGQRHRISFFL 138

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           V  V LV+QQ  V++      V    G+MG D W+   W   F T  V+V TA IL   L
Sbjct: 139 VDSVTLVFQQTAVLKNNLDQPVASIYGDMGLDLWNKDVWTGYFTTNMVIVCTADILTQCL 198

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
            HS I ME INLLI DE HHA K+H Y+ +M + Y   +   RP +FGMTASP++ K   
Sbjct: 199 LHSYITMEDINLLIFDEAHHAKKEHAYARIMKDGYLKANPASRPRIFGMTASPLDAKR-- 256

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
              D       LES L S + T  +   L + V  P E           W      K  +
Sbjct: 257 ---DPVKAAHELESLLHSKIATASNLNILRQVVGRPEE---------EQWKYAALKKPFK 304

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
            A+ +  ++               G  E L+ ++  S              L+A +Y   
Sbjct: 305 TALYQTLENQY-------------GDMECLKSIFAFS--------------LQASSY--- 334

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
            LG WCA +V    L+              K    +  K+ S  +   VE +  K ++++
Sbjct: 335 -LGPWCADRVWADALSE-------------KLLPRFHGKITSACKRLGVETSAQKAESEI 380

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL-KY 716
                      +   +  E++ ++    G  +D++        +++ KVQ L + L  ++
Sbjct: 381 -----------SRLKQMSEMIANYERPSG--LDIL-------EQLSDKVQVLYRHLARRF 420

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAEL--PS-----LSFVKSASLIGHNNSQEMRTFQM 769
           +   + + I+F ++   A +L  VF EL  P+     L  ++   + G N++      Q 
Sbjct: 421 EEAPNTKCIVFTKQRNTAKLLEAVFRELSVPNMRPGVLVGIRPGDISGMNSTYHQ---QF 477

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
           + TI +FR G +  + ATSVAEEGLDI  CN+V+RFDL  T++ YIQSRGRAR   S Y 
Sbjct: 478 KATI-EFRKGELNCIFATSVAEEGLDIPDCNLVVRFDLYDTLIQYIQSRGRARSLNSIYA 536

Query: 830 LMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAV-----PGTV 882
            M+E  N+ H T L     +EE +R+  EA+    L  L D S   S++A+         
Sbjct: 537 HMVEIDNMEHETRLDEVHQAEEVMRRFCEALPEDRL--LGDKSD--SLNAILERDSRKRQ 592

Query: 883 YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
           Y++ESTGA ++ +SA+ ++  Y S L ++ +S L P ++  + +       Y C++ LP 
Sbjct: 593 YKIESTGATLTYHSAMTVLARYASSLINEAHSSLHPCYVTTQTKG-----LYECEVILPE 647

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            +P   L G       LA+Q+     C  L   G   D  +
Sbjct: 648 ASPIRGLIGKPEPRKSLAKQSAAFETCILLRRHGLLNDHFV 688



 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 235/575 (40%), Gaps = 82/575 (14%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+     +   +NLL        ++  + E+ ++K   V L  E   I  +P  +    
Sbjct: 935  QPVYDAELIPLRRNLL--------DKMSDAEKDVEKRVVVCL--ETQVISAIPAMVATSC 984

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+++ R +S L+A +  D +   V     LEA+T  S         Q  F       
Sbjct: 985  LAFPAVITRFDSYLVARECTDTLGLKVQLEYALEAVTKDSDNTGEHRLEQIHFQRGMGKN 1044

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF++ P   E      R  ++ N  L+  A+ + +  +I++
Sbjct: 1045 YERLEFLGDCFLKMATSISLFVESPNDQEYDFHVNRMTLICNRNLFNTAIQRKIYEHIRS 1104

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                                        +  G+  
Sbjct: 1105 KGFSRRNWYPDGM---------------------------------------KLLRGKAN 1125

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGK-DAANHLMKWIGIQVESDPEEVG----CP 1576
             D      L  KT+ADV EALIG   + GG  +  +  +K +   V SD   V       
Sbjct: 1126 EDQGLTHALGEKTIADVCEALIGASLLSGGPVNRFDMAVKAVTALVNSDHHNVDNWAEYS 1185

Query: 1577 SRPACVPESVLRSVDFHA-----LEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRL 1629
            SR +  P  +  +  F       +E  L   F+   LL  A TH S PS  S V CYQRL
Sbjct: 1186 SRYSLPPYQIKEADGFEKDLARQVEMKLGYCFQYPKLLRSAFTHPSYPSAWSTVPCYQRL 1245

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GD++LD +  + L+  + +  P  LT+ + A V+N+    +AV+  LH HL++ S+ 
Sbjct: 1246 EFLGDSLLDMVCVEDLYERFPDRDPQWLTEHKMAMVSNKFLGSLAVRLSLHTHLQYFSNP 1305

Query: 1690 LDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            L  QI   V++            F L     PK L D+VE+  GAIF+DSG D  V+   
Sbjct: 1306 LQAQIARAVQDSQLAYDSHQTVDFWLHTDDPPKCLSDMVEAYLGAIFVDSGFDFGVIESF 1365

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQV 1804
            +    +P  + M   +T    HP   L  +       ++Y   R+  + +V+     V  
Sbjct: 1366 YAKHIKPYFEDMALYDTFANKHPTTFLHRKLTDDFGCIQYTL-RAAEIPSVDGAPPVVLA 1424

Query: 1805 GVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKG 1839
             V  +    +AQ  A+    A +K  E A    +G
Sbjct: 1425 AVLVH-DVVLAQGTASSGRYAKIKASEVAMKNLEG 1458


>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease dcl1; Includes: RecName:
           Full=ATP-dependent helicase dcl1
          Length = 1519

 Score =  258 bits (659), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 215/686 (31%), Positives = 323/686 (47%), Gaps = 109/686 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL++ +      D    N   ++ FLV  
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V+R      V H+ G MG D W+ Q W   F+   V+V TA+IL   L ++
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I M+ INLL+ DE HH  K HPY+ ++ + Y       RP +FGMTASPV+ KG     
Sbjct: 230 YITMQQINLLVFDEAHHTKKDHPYARIIRDSYLRVPPSSRPRIFGMTASPVDTKG----- 284

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D      NLE+ LDS + T      L + V  P+E V  YDK                  
Sbjct: 285 DVLEAARNLEALLDSKIATTSKLTILRQVVNRPNEEVWIYDK------------------ 326

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
               Q +     ++ M +R           +G          ++L    R   +A  ELG
Sbjct: 327 ---LQPTFTSDLYKLMESR-----------FG--------DISHLEPMFRFARHATSELG 364

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV-SKKDAKVVD 659
            WCA +V   +++AL +D               L K         VEG++  K+ +  + 
Sbjct: 365 TWCADRV---WVSALADD--------------VLPK---------VEGSIGGKRQSTGLG 398

Query: 660 SENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK-ILLKYQ 717
                V      I+E  EL++SH  +         GA  A   ++ KV+ L K I   + 
Sbjct: 399 QLPKDVHRDITRIKEASELVESHPPNDP-------GAPEA---LSSKVRVLWKEISQCFG 448

Query: 718 HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---RTFQMQ-ETI 773
              + + I+F E+   A VL  +F  L ++  ++   LIG  +S  +    TF+ Q  T+
Sbjct: 449 QETNTKCIVFTEKRYTAKVLFDLFTVL-NVPGLRPGVLIGVRSSDRIGMNVTFRQQILTM 507

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            +FR G +  L AT+VAEEGLDI  CN+V+RFDL KT++ Y+QSRGRAR   S Y  MIE
Sbjct: 508 VRFRTGEINCLFATAVAEEGLDIPDCNLVVRFDLYKTLIQYVQSRGRARHADSTYASMIE 567

Query: 834 RGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-----TVYQVE 886
           + N  H + L    ++E+ ++   + +    + H  D       DAV         Y + 
Sbjct: 568 KDNADHESILVQVNDAEKIMQSFCQLLPEDRILHGNDD----DTDAVLDREEWEEPYTLP 623

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
           ST A ++ +SA+ ++  Y S L  +  +  +  +++     P     Y C++ LP  +P 
Sbjct: 624 STAARLTHHSAITVLARYASSLQYENDTSAQVTYVV----LPVN-DAYVCEVILPEKSPI 678

Query: 947 EKLEGPVCSSMRLAQQAVCLAACKKL 972
               G        A++     AC+ L
Sbjct: 679 RGATGMPAMKKSTAKRYAAFEACRLL 704



 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 217/527 (41%), Gaps = 87/527 (16%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC-------YE 1403
             P+I+ R+++ L+ ++   K+   +     LEALT  S        Q+          YE
Sbjct: 1013 FPAIISRLDAYLIGLEACKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMGKNYE 1072

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF ++P  +E      R  ++ N  L+  A+ K L  +I++  
Sbjct: 1073 RLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSRG 1132

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +   D                  K+G                     
Sbjct: 1133 FSRDTWYPEGLTLLQGRD---------------HSKKIG--------------------- 1156

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVG-------- 1574
            S S   L+ KT+ADV EALIG   +  G      + ++ +   V+S+             
Sbjct: 1157 SESKHALAEKTIADVCEALIGAALLTPGPQHRFDMGVRAVSAVVDSNEHNAASWRDYISL 1216

Query: 1575 --CPSRPACVPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPSSG--VSCYQRL 1629
               P      P+     +D    +E+ L   F+   LL  A TH S PS+   V CYQ L
Sbjct: 1217 YSIPKYQEQAPDG--SEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSL 1274

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDA+LD +  + LF  + +  P  LT+ + A V+N+    +AVK  LH HL + SSA
Sbjct: 1275 EFLGDALLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSA 1334

Query: 1690 LDRQIRDFVKEVLEELLKP--GFNSFGLGDCKAPKV-LGDIVESIAGAIFLDSGRDTSVV 1746
            L  QI  + +E      +     + + L     PKV L D+VE+  GA+F+DS      V
Sbjct: 1335 LQSQITHYAEEAQAAASQSDVAVDYWTLTQ-DPPKVCLPDMVEAYLGAVFVDSNFRFEEV 1393

Query: 1747 WQVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEY----------KASRSGN 1791
               FQ    P    M   +T    HP   L  +   +   L Y              S  
Sbjct: 1394 EVFFQQHIKPYFHDMAIYDTFANRHPTTFLHNKLTNEYGCLNYCLKAGEIPGADGDASTV 1453

Query: 1792 LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            LA V V+   +  GVA +   + A+  A+ NAL  L   +  E +++
Sbjct: 1454 LAAVIVHDTILTTGVASS--GRYAKVKASENALTELLHIDRNEFRKR 1498


>gi|224576589|gb|ACN56968.1| At1g01040-like protein [Capsella grandiflora]
          Length = 180

 Score =  256 bits (654), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 156/187 (83%), Gaps = 7/187 (3%)

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            WVVSRFLFLKYPQKHEGQLTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV
Sbjct: 1    WVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGV 60

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
             PVFDEDTK+  SS FD+E+     K  + +N + +ED +MEDGE EGD SSYRVLSSKT
Sbjct: 61   PPVFDEDTKE--SSFFDEEQ-----KPLSKENSDVFEDGEMEDGEXEGDLSSYRVLSSKT 113

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHA 1594
            LADVVEALIGVYYVEGGK AANHLM WIGI VE DPEEV    +PA VPESVL+S+DF  
Sbjct: 114  LADVVEALIGVYYVEGGKIAANHLMTWIGIHVEDDPEEVEGTVKPANVPESVLKSIDFVG 173

Query: 1595 LEDALKI 1601
            LE ALK 
Sbjct: 174  LERALKF 180


>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
           42464]
 gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
           42464]
          Length = 1604

 Score =  255 bits (652), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 219/712 (30%), Positives = 324/712 (45%), Gaps = 134/712 (18%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNK---KMLAVFLVPK 360
           R YQL++ E AK +NTIA L+TG+GKTLIA LL+R +I N+L+ ++    K +A FLV K
Sbjct: 135 RDYQLELFELAKTRNTIAVLDTGSGKTLIAALLLRWTIQNELESRSSGLPKRIAFFLVDK 194

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEM----GQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           V LV+QQ  V+     Y +  +CG+M     +DFW     ++ FD    +V TA IL   
Sbjct: 195 VALVFQQHAVLTCNLDYPIEKFCGDMVENVSEDFW-----RKAFDENMAIVCTADILYQC 249

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE-KRPSVFGMTASPVNLKG 475
           L HS ++M+ +NLL+ DE HH  K HPY+ ++ +FY     E KRP + GMTASPV+   
Sbjct: 250 LSHSYVRMDQVNLLVFDEAHHTKKNHPYARIIKDFYTDVKDENKRPRILGMTASPVD--- 306

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPS-EVVVEYDKAASLW--SLHEQ 532
             +Q D  +    LE  L S + T+ D   L      P  EVV EYDK    W   L++ 
Sbjct: 307 --AQTDPKVAAAELEGLLHSQIATVADPTVLHNSSAKPKHEVVAEYDKRPPDWETELNQA 364

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
           LK +                         G     R+ +  ++                 
Sbjct: 365 LKSL------------------------VGDLRVFRRPFAFTDT---------------- 384

Query: 593 NYALGELGQWCAYKVAQSFL---TALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
             A  ELG WCA +  Q F     A++ + RA  +++   Q +Y             +  
Sbjct: 385 --AAAELGPWCADRYWQLFFEEGEAVKLESRA--EMEAFSQSTY-------------DQG 427

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
           V     KV ++ N              L+  H             A  + G ++ KV  L
Sbjct: 428 VGHPVDKVREAHN--------------LVKRHTF-----------ARPSIGVLSSKVVLL 462

Query: 710 IKILLK--YQHTEDFRAIIFVERVVAALVLP--------KVFAELPSLSFVKSASLIGHN 759
           ++IL +  Y+     R I+FV +     +L         K+   +P L          + 
Sbjct: 463 LRILREQFYRANHRRRCIVFVRQRNTVSLLADLLQQPEMKIPGLVPGLLVGGGHPDASYG 522

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
           N++     Q++ TI KF+ G +  + ATSVAEEGLDI  CN +IRFDL  T++ YIQSRG
Sbjct: 523 NAKVTYRDQVR-TIYKFKKGELNCIFATSVAEEGLDIPDCNAIIRFDLNDTLIQYIQSRG 581

Query: 820 RARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDA 877
           RAR+ GS YI M+E GNL H   L   + SE+ LRK  EA+        K T    ++D 
Sbjct: 582 RARQEGSVYIHMVESGNLEHRRKLAQNQQSEDALRKFCEAMPEDR----KLTGNNFNMDY 637

Query: 878 V-----PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
                     Y V  TGA ++   ++  +  + + LP      L  ++++     PGG  
Sbjct: 638 FLRKEKGQRQYTVPETGAKLNYRQSLVFLAAFVASLPHPPGVSLTADYLV--LPVPGG-- 693

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            + C++ LP ++P     G V  S  +A+ +     C KL +       L P
Sbjct: 694 -FQCEVTLPDSSPIRNATGKVHESKAVAKCSAAYEMCLKLIKANYLDQHLRP 744



 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 150/617 (24%), Positives = 239/617 (38%), Gaps = 134/617 (21%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGP--------------LEYSSYADYYKQKYGVEL 1291
             ++F++   R+++      P  EG + P              L YS  A  +++  G   
Sbjct: 936  SRKFFLRRRRHDLRPTDPVP--EGVVAPGHRAWRVPGGNRDILNYSLSA--WRRSRGSMT 991

Query: 1292 IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
            + + QP++    +   +N L        +     +++  K  ++ L P    I PLP  +
Sbjct: 992  LREDQPVVEAELLPIRRNFL--------DDNIRDDDLEPKPCFLVLEP--LRISPLPVDV 1041

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQET------------ 1399
            V      PSIM R++S L+A++   K+   +     LEA T  S                
Sbjct: 1042 VAMVYTFPSIMHRIDSNLVALEACKKLGLNIRPDLALEAFTKDSDNTDENDAEKIHFQGG 1101

Query: 1400 --FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
                YER E LGD +LK   +  +F   P K E +    R  +V N  L+  AL   L+ 
Sbjct: 1102 MGSNYERLEFLGDCFLKMATTISIFTLLPDKDESEYHIERMLLVCNRNLFNKALEVKLEE 1161

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            YI++  F    W   G+                         K G  ++          D
Sbjct: 1162 YIRSTAFDRRSWYPEGL-----------------------TLKRGKRRDV---------D 1189

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL---MKWIGIQVE------S 1568
            G+ +        L+ KT+ADV EALIG  Y+     + +     ++ + + V       S
Sbjct: 1190 GKHQ--------LADKTIADVCEALIGAAYLTAQDRSPSDFDLAVRAVTVMVRDRNHAMS 1241

Query: 1569 DPEEVGCPSRPA------CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS-- 1620
               +     RPA      C P  +  +  F    + +   F+   LL  A  H + P+  
Sbjct: 1242 SYGDYYAAYRPAKWQTVPCSPAQIDMAARF---RERMGYAFRHPRLLRSAFQHPAYPTFY 1298

Query: 1621 SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             G+  YQRLEF+GDA+LD    + LF  +    P  LT+ + A V+N+  A +AV    H
Sbjct: 1299 EGLPSYQRLEFLGDALLDMACVEFLFRRFPGADPQWLTEHKMAMVSNQFLACLAVYLGFH 1358

Query: 1681 VHLRHGSSALDRQIRDFVKEVLEEL-------------------------LKPGFNSFGL 1715
              + H SS +  ++  FV EV  EL                          +  F     
Sbjct: 1359 KSIVHCSSQVQSEVAGFVAEVEGELRAAKEGTEEGEEGEEEEEEKKERGGEEEAFARDFW 1418

Query: 1716 GDC--KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLPM-HPV 1768
              C  + PK L D+VE+  GA+F+DSG D   V + F    +P  + M   +     HPV
Sbjct: 1419 VRCARRPPKCLADVVEAYVGAVFVDSGYDFGEVRRFFADHVRPFFEDMRPYDAFARKHPV 1478

Query: 1769 RELQERCQQQAEGLEYK 1785
              L    Q +    E++
Sbjct: 1479 TALAAVLQSKMRCREWR 1495


>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1495

 Score =  254 bits (650), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 217/700 (31%), Positives = 321/700 (45%), Gaps = 138/700 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQ+++ E+A+  NTIA L+TG+GKTL+AVLL++ I     N      K  +A FLV  
Sbjct: 80  REYQIELFERARASNTIAVLDTGSGKTLVAVLLLKHILQIELNKRANGRKPRVAFFLVDS 139

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ+ V+R      VGH+ G +G D WD Q W +  +   V+V TA+IL + L + 
Sbjct: 140 VTLVFQQSAVLRNNLDQSVGHFYGNLGPDLWDQQTWDKHLEKYMVIVCTAEILNHSLLNG 199

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I ++ INLLI DE HHA K+HPY+ ++ + Y      KRP +FGMTASPV+ K      
Sbjct: 200 HIGIDQINLLIFDEAHHAKKEHPYARIIRDSYLKADPGKRPRIFGMTASPVDAK-----C 254

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D A     LE+ L+  + T  D   L   V  P E    YDK             + + +
Sbjct: 255 DIAEAAMQLETLLNCRIATTSDLALLRNFVNKPIEEEWVYDK-------------LPLPL 301

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E    S+                   L+  YG     E  GA       R  + A  ELG
Sbjct: 302 ETHLHST-------------------LKTKYGDMPILE--GA------FRFASVASSELG 334

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSK-KDAKVVD 659
            WCA +V                   +   +  L K         +EG+V K  ++   D
Sbjct: 335 SWCADQVWA-----------------LALSDEVLPK---------LEGSVGKASESDPQD 368

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQH 718
           SE    E     I+E   L           + I         ++ KV+ L++ L  ++  
Sbjct: 369 SEKASEE--IKRIQEANQLVK---------EYIANQTFTPSDLSSKVELLMRKLQEQFAK 417

Query: 719 TEDFRAIIFVERVVAALVLPKVFAEL--PSLS-----FVKSASLIGHNNSQEMRTFQMQ- 770
           + D + I+F +R   A VL ++  +L  P+L       V+    +G N+     TF+ Q 
Sbjct: 418 SPDTKCIVFTQRRNTAKVLLQLCEKLQFPNLRPDVLVGVRKGDALGMNS-----TFRRQF 472

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
             + KFR   +  L ATSVAEEGLDI  CN+V+RFDL  TV+ Y+QSRGRAR+  S Y  
Sbjct: 473 LVLVKFRKSEINCLFATSVAEEGLDIPDCNLVVRFDLYDTVIQYVQSRGRARRADSVYAT 532

Query: 831 MIERGNLSHATFLRNARNSEETLRK--------EAIERTD-----LSHLKDTSRLISVDA 877
           M+E GN +H+T L+  R +E  ++           + R D     L H +D  R      
Sbjct: 533 MVECGNRNHSTRLQEVRRAEHLMKNFCNLLPEDRKLYRDDHDMGVLIHQEDRKR------ 586

Query: 878 VPGTVYQVESTGAVVSLNSAVGLIHFYCSQL----PSDRY----SILRPEFIMERHEKPG 929
                Y + STGA+++   A+G++  + S L     S +Y    S      +M  +E   
Sbjct: 587 ----TYTIPSTGAMLTYRHAIGVLARFASSLLTVPKSQQYENEISASVTYIVMSENES-- 640

Query: 930 GPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
               +SC++ +P  +P  ++ G       LA+Q+    AC
Sbjct: 641 ----FSCEIIMPEKSPVRRVLGCSEPKKSLAKQSAAFDAC 676



 Score =  153 bits (386), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 171/592 (28%), Positives = 247/592 (41%), Gaps = 103/592 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   +   +N L    E         EE    T  V  P  L  I  +P S+    
Sbjct: 937  QPVLQAELICLRRNFLDKAAE---------EERASNTRCVICPQPLA-ISAIPMSVAATC 986

Query: 1356 QRLPSIMRRVESMLLA------IQLKD-KINYPVPASKILEALTAAS------------C 1396
               P+I+ R+ES L+A      + L D K+ Y       LEA T  S             
Sbjct: 987  LVFPAIISRMESYLIAQEGCKMLDLGDIKLEYA------LEAFTKDSDNTEEHRSLQIHV 1040

Query: 1397 QETF--CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            Q      YER ELLGD+ LK   S  LF + P   E      R  ++ N  L++ A+   
Sbjct: 1041 QRGMGKNYERLELLGDSVLKMATSISLFAQNPDDDEYDYHVNRMCLICNKNLFKNAIELK 1100

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  YI++  F+   W  PG+             SL                   EY  D 
Sbjct: 1101 LYEYIRSRGFSRHMWYPPGL-------------SL-------------------EYGRDH 1128

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV 1573
             +  + EG  S    L+ KT+ADV EALIG   + GG D    + +K + I V S     
Sbjct: 1129 AKFIDSEGKHS----LAEKTIADVCEALIGASLLSGGDDNRYDMAIKAVTIFVNSQNHTA 1184

Query: 1574 ----------GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS-- 1621
                        P      P+   +++     E  +   FK   LL  A TH S P +  
Sbjct: 1185 TSWKDYISAYSIPLYQNRAPDGFEKNLARQIFEK-VGYDFKYPRLLRSAFTHPSYPLAWA 1243

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
             V CYQRLEF+GDA+LD +  +HLF  + N  P  LT+ + A V+N+    +AVK  LH+
Sbjct: 1244 KVPCYQRLEFLGDALLDMVCVEHLFHRFPNRDPQWLTEHKMAMVSNKFLGALAVKLGLHL 1303

Query: 1682 HLRHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
            HL+H S+ L  Q   + +E+ L E    G   + L    +PK L D++E+  GAIF+DSG
Sbjct: 1304 HLQHFSNPLMIQNSKYAEEIQLAESESNGEVDYWLSTSDSPKCLPDMLEAYLGAIFVDSG 1363

Query: 1741 RDTSVVWQVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATV 1795
             D +V+   FQ    P    M   +T    HP   L  +        +Y   +S  +  V
Sbjct: 1364 FDFTVIEAFFQRHILPFFHDMSIYDTFANRHPTTFLHSQMTHNYRCADY-CLKSAEVPAV 1422

Query: 1796 E---------VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            E         V + G  +  A     + A+  A+  ALAV+     +E +E+
Sbjct: 1423 EGETPRVFAAVMVHGQSIASAVASSSRYAKVRASTRALAVIDGMSLSEFRER 1474


>gi|195995859|ref|XP_002107798.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
 gi|190588574|gb|EDV28596.1| hypothetical protein TRIADDRAFT_51673 [Trichoplax adhaerens]
          Length = 1418

 Score =  253 bits (646), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 251/887 (28%), Positives = 417/887 (47%), Gaps = 149/887 (16%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
            R YQLD+   A+++NTI +LETG+GKTLIAVL+IR +  +L +  Q     A+FLV  VP
Sbjct: 56   RKYQLDLAVIAQERNTIVYLETGSGKTLIAVLVIRQLYRELSKSLQAGGKRAIFLVNTVP 115

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            LV+QQA+ I +QT + VG   G+   D      W+  FD   V+V T Q LL +L  +I+
Sbjct: 116  LVHQQAKFIADQTSFCVGKLFGKCNSD-KRRSNWKDFFDKNNVIVGTPQTLLRLLELNIV 174

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             M+ INL++ DECHHA K HPYS +M        ++ RP + G+TA     KG       
Sbjct: 175  NMQMINLIVFDECHHATKHHPYSRIMDAV-KALEEQGRPKILGLTACI--FKGECKPSKV 231

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              ++  LE KL S +        ++K+   P+E V++Y+   +  S+ EQ       VE 
Sbjct: 232  PQRLAELEEKLSSTIAIPGYLTYIDKNKTPPTEYVIDYETTET--SIFEQ-------VEA 282

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL---GEL 599
             +  S     +  M +    +K         ++R +   +  L+  L A + A+      
Sbjct: 283  LSDCSFLLKGFDAMYSNSFESK---------AQREQQSTSLQLV--LTAFDEAILTVNTF 331

Query: 600  GQWCAYKVAQSFLTALQNDERA-------NYQLDVKFQESYLSKVVSLLQCELVEGAVSK 652
            G      VA+S +  ++ + R        +Y+L      S+   V+ +L+ +L       
Sbjct: 332  GLRIFPLVAESIVKCIRKELRMFRGKDGIDYKLSA--SNSWFRPVIRILEAKL------- 382

Query: 653  KDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
               K+ +S   +           +LLD  V++  +  D   G    D +VT  V  L ++
Sbjct: 383  -STKIDESHPCYTCS-----HFAKLLD--VLTTFKEQDT--GIIFVDRRVTAFV--LHEL 430

Query: 713  LLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQET 772
            L++  HT+   A + V  V+               S +KS  L+G     +M  ++ +E 
Sbjct: 431  LVRISHTDPNLAHLNVGCVIGR-------------SSIKS-QLLGQ---AQMSRYEQEEV 473

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR  +  LLVAT+V EEG+D+ +CNVVIRFD      +Y+QSRGRAR   S Y+LMI
Sbjct: 474  MNRFRRHKYNLLVATNVLEEGVDVSECNVVIRFDRVNHFSSYLQSRGRARADDSSYVLMI 533

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVD------AVPGTVYQVE 886
             R NL       N+ +S E   + + E  +      +  L S D      +   + + VE
Sbjct: 534  NRENLDAFMEEYNSWHSVEKFLRSSPELLNTIVSGISKSLFSNDNSTTDASTISSKFVVE 593

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
            +TGA V+L SA+ ++  Y   + + +     PEF  E ++          K++L  + P 
Sbjct: 594  TTGAEVNLFSAISVLLRYSQSMINGK----SPEFEYETNDD-----RTRAKIKLIFSNPP 644

Query: 947  EK--LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPL 1004
            EK  +EGP+  S ++A++A  L ACK LHE+G  TD L P+ G   Q   +D+       
Sbjct: 645  EKTTIEGPMMQSKKIAKKASALEACKFLHEVGEITDNLEPNVGKYHQS--IDK------- 695

Query: 1005 PGTARHREF---YPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLT 1061
               +++++F   +P+ ++        +   DG      F+L M  ++  N+ I     ++
Sbjct: 696  ---SQYKQFPIKFPDNLS--------MPIEDGDN----FYLHMIKIELKNSTIESIDTVS 740

Query: 1062 QVSDFAVLFSSELDA------------ELASLKNFHVRL------MSIV------LDVDV 1097
              SDF ++  ++L               L SL++  V +      +S++      L  ++
Sbjct: 741  CSSDFGLICKTKLHEIEPTYLQTSCGDILFSLQSLAVPMHYSCDELSLISKFVEYLFTNI 800

Query: 1098 EPYTT----PWDPAKA---YLFVPVVSDKSVDPMNELDWDLVEKITK 1137
             P +T     +DP  +   Y+ VP+   KS   M  ++++L+  + K
Sbjct: 801  TPCSTITDLIYDPTNSYAKYMIVPLNYAKSSRSMYSINFELMATLLK 847



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 249/588 (42%), Gaps = 99/588 (16%)

Query: 1225 MADSCANAGDL-----EGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSY 1279
            + D C N  DL      G  VT  +    + + +I Y+++  S FP  +         +Y
Sbjct: 858  LGDGCKNVNDLLIVKNYGHWVT--NQVDVYALRNICYDLSPLSRFPTDKRL-------TY 908

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYC------KNLLSPRFEHSEEQEGEGEEILDKTY 1333
              YY +KY   +    QPL   + +         +N +SP    +E ++           
Sbjct: 909  KAYYHRKYHTRIENSNQPLFAVKTLHRFPVALVHENCISPCNNTTESKKSNSG------- 961

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILE---- 1389
            +V L PELC +HP   S+   +Q LP  + ++E   LA ++ D I       K+ E    
Sbjct: 962  FVHLVPELCLVHPFSASMWMLSQFLPLTLYKIEKNCLAYEMIDYIQCASILKKVTEPRRK 1021

Query: 1390 ----------------ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQL 1433
                            +LT    +E   + + + +G  ++K V++  L+   P  +   L
Sbjct: 1022 KLLLRETTNLVDRITQSLTLPIAEEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYAL 1081

Query: 1434 TRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDSSLFDQ 1492
            T  R+Q  S   L+  A    + SYI +  F   + W  PG    F    KD  SS    
Sbjct: 1082 TMKRRQQSSEFYLFNLAAKTNIPSYIISKPFNQLKCWIPPGF--TFSIRCKDDSSS---- 1135

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            + ++AE  +                  +E  + ++  LS K++A+ + A++G       +
Sbjct: 1136 DSALAERTI------------------IESITDNF--LSVKSIAECISAIVGALLFPDNE 1175

Query: 1553 DAANHLMKWIGIQVE-----SDPEEVGCPSRPACVPESVLRSV--DFHALEDALKIKFKD 1605
                + +KW+G  +E     S+  +V        + ES  +S     H  E+ L  KF +
Sbjct: 1176 TEGLNFLKWLGFAIEPFSSISNGFDVWNEKITHMIEESNSQSWLEKLHKFEENLGYKFIN 1235

Query: 1606 RGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
               L+ A TH+S        Y++LEFVGD++L++L+ K+LF + T+    R       A+
Sbjct: 1236 IDYLILAFTHSSSEFGDSFNYEKLEFVGDSILNYLVIKYLFLA-TDQDITRSKFFYGIAI 1294

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG---------------F 1710
            +NE +  ++  +  H HL + S  +   I  F K+   +LL+ G               F
Sbjct: 1295 SNEVYGLLSYAYNFH-HLFYQSPFVKEMILGFEKKT-ADLLEGGSIPRNGNKHDWVYTIF 1352

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            +     D   PK L D+ ES+A AI+ DSG++ S VW ++  LL P +
Sbjct: 1353 SKSIDDDFSIPKELADVFESLAAAIYFDSGQNLSTVWNIYSNLLKPFL 1400


>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
          Length = 1927

 Score =  253 bits (646), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 229/770 (29%), Positives = 364/770 (47%), Gaps = 131/770 (17%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++L++A KKNTI  L TG+GKT IAVLL++     +   L +  K+  A F+V K
Sbjct: 14   RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLDQGGKR--AFFIVEK 71

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREF-DTKQVLVMTAQILLNILRH 419
            V LV QQA+ I   T + VG   G+   + W +     +F     V+V+TAQ LL+ + H
Sbjct: 72   VNLVEQQAKHIEVHTSFKVGQVHGQTSSELWKSPVACEKFMKENHVVVITAQCLLDFINH 131

Query: 420  SIIKMEAINLLILDECHHAV-KKHPYSLVMSEFYH-TTSKEKRPSVFGMTASPVNLKGVS 477
            + IK++   +LI DECHHA+  KHPY L+M+++     + E  P V G+TAS +  K   
Sbjct: 132  AFIKIQDTCVLIFDECHHALGSKHPYRLIMTKYKELKKAGEPVPRVLGLTASLIKEKVAP 191

Query: 478  SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV-------------EYDKAA 524
             ++  + ++  LES LDSV+ T  D   L K+   P E +V              YDK  
Sbjct: 192  EKL--SEQLVKLESVLDSVIETASDLVSLTKYGAKPYEAIVLCRDFETDKLGVPNYDKIM 249

Query: 525  SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
            +L  L+E  K +             R    F    D   +   R+               
Sbjct: 250  NL--LYETDKFI-------------RETTLFHPDLDMDPRSYAREA-------------- 280

Query: 585  LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
                L+A      +LG W A+K++Q F                   E  L K ++L Q  
Sbjct: 281  ----LKATKSVFQQLGPWAAWKISQMF-------------------EKDLMKHINLQQLP 317

Query: 645  LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
                         + +    +E    +I+    L+ +V         II          P
Sbjct: 318  EKATLFLNLAKTTIITVKRLLEPEMRQIKSLNELERYVPHR------IIRLFQVFEMFNP 371

Query: 705  KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIG--- 757
              Q   K  +  + TE   AIIFV +   A  L  +   +    P   F+ +  ++G   
Sbjct: 372  DFQ---KQRMALEKTEHLSAIIFVNQRYIAYSLHIMMRAIRQWEPKFKFLNTDFVVGASG 428

Query: 758  ----HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                ++N+Q ++  Q  + + KF  G + +L+ATSV EEG+D++QCNVVI+FD    + +
Sbjct: 429  PNMANSNNQGLQKRQT-DALRKFHRGDLNVLIATSVLEEGVDVKQCNVVIKFDRPTDMRS 487

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHA-TFLRNARNSEETL--RKEAI----ERTDLSHL 866
            Y+QS+GRARK GS Y++++++ + S   + L++ +  E+ L  R   +    E   L+ L
Sbjct: 488  YVQSKGRARKAGSRYVVLVDQKDTSACDSDLKDFQQIEKILLSRHRTVNNPTEDDSLTDL 547

Query: 867  KDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPE---FIME 923
             D   L++        Y VE TGA + +++A+ L++ YC++LPSD ++ L P      +E
Sbjct: 548  GDVDDLMA-------PYVVEKTGATIKMSNAIALVNRYCAKLPSDIFTRLVPNSTIIPVE 600

Query: 924  RHEKPGGPTEYSCKLQLPCNAPFEK---LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
             H    G T+Y  +L LP N+P +    L+ P+  + + AQ AV L AC++LH  G   D
Sbjct: 601  DH----GVTKYCAELLLPINSPIKHAIILKDPM-PNKKAAQMAVALEACRQLHLKGELDD 655

Query: 981  MLLPDKGSGEQQEKVDQNDE--GEPLPGTA------RHREFYPEGVADIL 1022
             LLP KG     + ++Q D+   E  PG A      + ++ Y + +A  L
Sbjct: 656  NLLP-KGRESIAKLLEQMDDEPDEYAPGMAAKVGSSKRKQLYDKKIARAL 704



 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 243/517 (47%), Gaps = 68/517 (13%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L ALT ++  +    ER E +GD++LK+  + +L+     +HEG+L+  R + VSN  L
Sbjct: 1412 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVSNCNL 1471

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+     G+   I A++F A   W  P  +P  +    + D +   +EK +  ++L   +
Sbjct: 1472 YRLGKKLGIPQLIIANKFDAHDSWLPPCYIPTCNFKAPNTDDA---EEKDIEMERLLNGE 1528

Query: 1506 NYNEYEDDDME-DGELEGDSSS-------------------------YRVL-----SSKT 1534
               E   +    D EL+ ++ +                         Y +L     S K+
Sbjct: 1529 TIEEKPQNKTGWDMELKDEAKTTTEKIETITFPKRTALVNEDISPLPYNLLTQQNISDKS 1588

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQV-ESDPEE---------VGCPSRPACVP- 1583
            +AD +EALIGV+ +  G +    +M W+G++V + D            +  P+ P     
Sbjct: 1589 IADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAVTDVAAPLLRFIDTPTNPNASTI 1648

Query: 1584 --ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHL 1640
              +++ +   F  LE+ +  +FK+R  LV+A THAS  ++ V+ CYQRLEF+GDAVLD++
Sbjct: 1649 QLDNLWQQFQFAKLEEKIGYRFKERAYLVQAFTHASYSNNRVTGCYQRLEFLGDAVLDYM 1708

Query: 1641 ITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE 1700
            IT+ LF       PG LTDLR+A VNN  FA +AVK++   H       L   I  FV+ 
Sbjct: 1709 ITRFLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKYEFQKHFIAMCPGLHHMIEKFVQL 1768

Query: 1701 VLEELLKPGFNS-------------FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
              +      FN+                 D + PK LGD+ ES+AGAI+LDSGR+    W
Sbjct: 1769 CADRNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTW 1828

Query: 1748 QVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAE--GLEYKASRSGNLATVEVYIDGVQ 1803
            QV   ++   +       P  P+REL E    +A    +E          TV+V  +   
Sbjct: 1829 QVLFHMMRSTIESCCANPPRSPIRELMELESSKARFSKMERILETGKVRVTVDVGNNMRF 1888

Query: 1804 VGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGD 1840
             G+ +N   ++A+  AA+ AL  L   E    +   D
Sbjct: 1889 TGMGRN--YRIAKATAAKRALRYLHMIEVQRRQSPSD 1923



 Score = 45.4 bits (106), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 31/150 (20%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            +YV  I  ++   S FP          ++++ +Y+ +KY +E+  ++Q L+     S   
Sbjct: 892  YYVAEILTDLRPSSQFPDHN-------FTTFNEYFIKKYNLEIYDQEQSLLDVDFTSNRL 944

Query: 1309 NLLSPRFEH--------------------SEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            NLL PR +                     SE +E         +    L PEL  +HP+ 
Sbjct: 945  NLLLPRIQSQARRARSFSGSSTSSAPPTPSESRESGPH----PSQRQILIPELMDVHPIS 1000

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
             +L      LPSI  R+  +LL+ +L++ I
Sbjct: 1001 ATLWNVIAALPSIFYRINQLLLSDELRETI 1030


>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
           Silveira]
          Length = 1465

 Score =  252 bits (643), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 211/696 (30%), Positives = 323/696 (46%), Gaps = 113/696 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKKMLAVFLVPKVP 362
           R YQL++ E+AKK N IA L+TG+GKTLIAVLL++ I     + R  +K      V  V 
Sbjct: 100 REYQLELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEK---PHRVDSVT 156

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV+QQA V++      V  +CG M  D W+ + W+R      V+V TA++L   L H+ +
Sbjct: 157 LVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLHAFV 216

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           KME INLLI DE H+A K HPY+ ++ +FY      KRP +FGMTASPV+ K     VD 
Sbjct: 217 KMENINLLIFDEAHNAKKDHPYARIVKDFYLKDGNAKRPKIFGMTASPVDAK-----VDV 271

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLKQMEVAV 540
                NLE+ L+S + T  +   L + V  P+E V  YD+    +   L+++L       
Sbjct: 272 VKAARNLETLLNSQIATASNLSLLRQSVARPNEEVWSYDRLDQPFETRLYKEL------- 324

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                    RS++        G    L +++  S +  S+                  LG
Sbjct: 325 ---------RSRF--------GDLRALEKLFTFSLKASSN------------------LG 349

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD------ 654
            WCA  V    LT                 E  L K         +EG  ++        
Sbjct: 350 AWCADWVWSYALT-----------------EESLPK---------LEGRAARTAMGNLPI 383

Query: 655 AKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
           AK+V       E     I E  E++ SH        D  I   +   KV      L+K  
Sbjct: 384 AKIVRP-----EAEIQRIREASEIIRSHKFG-----DPAIRPELLSPKVRRLHHELLKYF 433

Query: 714 LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG--HNNSQEMRTFQMQE 771
            ++  T   + I+F E+   A +L  +F+++ +   ++   LIG   + S  M     Q+
Sbjct: 434 ERHTDT---KCIVFTEQRHTARILCDLFSKIGT-KHLRPGVLIGVRSDASGGMNISFRQQ 489

Query: 772 TIA--KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
            +A   FR G V  L ATSVAEEGLDI  CN+++RFDLA T+  YIQSRGRAR   S + 
Sbjct: 490 VLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRGRARHMNSTFA 549

Query: 830 LMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSRLISVDAVPGTVYQVES 887
            ++ER N  H   + + ++SEE +++  I   +  + +  D   L   D    + Y V++
Sbjct: 550 HLVERDNFVHRESVNHLQSSEEIMKRFCISLPKDRILNSNDVDALYEGDRNRKS-YTVQT 608

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           TGA ++ NS++ ++  + + L  ++ +     +   R  K      + C++ LP  +P  
Sbjct: 609 TGAKLTYNSSLVVLAHFANSLQYEKETSTVVSY-YHRFTK----NAFVCEVVLPEKSPIR 663

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            + G   S   +A+Q+     C  L + G   D  +
Sbjct: 664 GIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 699



 Score =  142 bits (359), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 239/576 (41%), Gaps = 123/576 (21%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+I+   +   +NLL  R    + +EG+        YY+ L P                
Sbjct: 945  QPVIKAEIIQLRRNLLDKRTNKEKIKEGD--------YYICLEP---------------- 980

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
                            + +  +++ P+     LEALT  S        Q+          
Sbjct: 981  ----------------LTISAELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMGKN 1024

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  +V N  L++ A+   L  +I++
Sbjct: 1025 YERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEFIRS 1084

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                    ++ + K                 G+ +
Sbjct: 1085 QSFSRRGWYPEGL--------------------TLLQGK-----------------GQSK 1107

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPS 1577
            G + +   L+ KT+ADV EALIG   +   K+    + +K +   V SD   V      S
Sbjct: 1108 GATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYS 1167

Query: 1578 RPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPSSG--VSCYQRL 1629
            R   +P+     VD   L+ A ++K      FK   LL  A TH S PS+   V CYQRL
Sbjct: 1168 RLYSLPKYQTAVVDAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVPCYQRL 1227

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDA+LD    +H++  + +  P  LT+ + A V+N+    VAV+  LH HL H S++
Sbjct: 1228 EFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTS 1287

Query: 1690 LDRQIRDFVKEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            L  QI ++V+E+    L+ G   +++ L     PK L D+VE+  GAIF+DS     VV 
Sbjct: 1288 LQSQITNYVEEIEAAELESGDSPDAWTLTS-DPPKCLPDMVEAYIGAIFIDSNFSFEVVE 1346

Query: 1748 QVFQPLL-----DPMVTPETLPMHPVRELQER----------CQQQAEGLEYKASRSGNL 1792
            + FQ  L     D  +       HP   L  R          C +  E        +  L
Sbjct: 1347 EFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRLAIDFGCSNYCLKAGEVPYVDGPGTRVL 1406

Query: 1793 ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            A V V+ + V  GVA +   + A+  A+  AL+ L+
Sbjct: 1407 AAVIVHDEVVTEGVASS--SRYAKLKASEAALSKLE 1440


>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
          Length = 1374

 Score =  250 bits (639), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 217/725 (29%), Positives = 327/725 (45%), Gaps = 148/725 (20%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETG--------------------AGKTLIAVLLIRSICND 344
           R YQ+++ E+AK +NTIA L+TG                    +GKTLIAVLL++ I  +
Sbjct: 5   REYQVELFERAKSQNTIAVLDTGTCIQAQLDVIPFFSPNCTTGSGKTLIAVLLLKHIIQN 64

Query: 345 --LQRQNKK--MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREF 400
             + R N K   ++ FLV  V L +QQA V+R      V  + G MG D W  Q W  +F
Sbjct: 65  ELIDRANGKPPRISFFLVDSVTLAFQQAAVLRNNLDQNVAQFFGAMGTDLWSKQTWDHQF 124

Query: 401 DTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR 460
           +   V+V TA+IL   L +S I+M+ INLLI DE HH  K HPY+ ++ E Y      KR
Sbjct: 125 ENNMVIVCTAEILNQCLLNSYIRMDQINLLIFDEAHHTKKDHPYARIIRESYLKADPTKR 184

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
           P +FGMTASP++ KG     D       LE  LDS + T      L + V  P E   EY
Sbjct: 185 PRIFGMTASPIDTKG-----DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEY 239

Query: 521 DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD 580
           DK    ++                        +Q + AR  G    L+ V+  + +  S 
Sbjct: 240 DKLDPPFA---------------------TKLYQILQAR-FGDISSLQPVFRFTLQASS- 276

Query: 581 GAANLIQKLRAINYALGELGQWC-----AYKVAQSFLTALQNDERANYQLDVKFQESYLS 635
                            ELG  C     AY +A   L  L+ + R       K  +S  S
Sbjct: 277 -----------------ELGPCCADRAWAYALADDVLPKLEGNVR-------KLAQSISS 312

Query: 636 KVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGA 695
            +    QC L E +  ++ + +V + +                +S  V G          
Sbjct: 313 PIP---QCALKEISRIQEASDIVKNHS---------------FNSPNVPG---------- 344

Query: 696 AVADGKVTPKVQSLIKILLKY-QHTEDFRAIIFVERVVAALVLPKVFA--ELPSLSF--- 749
                +++PKVQ L + L+KY +H    + I+F ++   A +L  +F+  E+P L     
Sbjct: 345 -----ELSPKVQLLRQKLIKYFEHPTKTKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVL 399

Query: 750 --VKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
             V+S  ++G N S     F+ Q   + KFR G +  L ATSVAEEGLDI  CN+V+RFD
Sbjct: 400 IGVRSGDIVGMNVS-----FRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVVRFD 454

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLS 864
           L  T++ Y+QSRGRAR   S Y  MIER N  HA  L   R +E+ ++   E +    + 
Sbjct: 455 LYNTLIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRIL 514

Query: 865 HLKDTSRLISVDAV-----PGTVYQVESTGAVVSLNSAVGLIHFYCSQL----PSDRYSI 915
           H  D+     +D++         + + +TGA ++ +SA+ ++  Y S L      ++ + 
Sbjct: 515 HGIDS----EIDSILQGEEEKRTFIIRATGAKLTYHSALAILARYASSLVRTVQYEKETS 570

Query: 916 LRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEM 975
            +  +++           + C++ LP  +P   L G   S    A+Q+     C  L + 
Sbjct: 571 AQATYVVLPQNN-----SFVCEVILPEKSPVRGLTGVPASKKSAAKQSAAFDTCVLLRKH 625

Query: 976 GAFTD 980
               D
Sbjct: 626 KLLDD 630



 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 214/508 (42%), Gaps = 97/508 (19%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QP++    V   +NLL        ++  + E+ ++   +V + P    I  +P  +   
Sbjct: 878  QQPVLEVELVRLRRNLL--------DKMTDTEKDVETRCFVCIEP--LRISAIPEEIAAS 927

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------ 1401
                P+I+ R+++ L+A++    ++  V     LEA T  S        Q+         
Sbjct: 928  CLAFPAIINRLDAYLIALEGCKTLDLSVKPEYALEAFTKDSDNTEEHRVQQIHVQRGMGK 987

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF++ P   E      R  ++ N  L+  AL K L  Y +
Sbjct: 988  NYERLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYTR 1047

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F+   W   G+  +   D +         +K  AE K                    
Sbjct: 1048 SRGFSRHTWYPDGLTLLHGRDHR---------KKISAESK-------------------- 1078

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEEVGC---P 1576
                     L  KT+ADV EALIG   + GG  +  +  +K +   V+S   +  C    
Sbjct: 1079 -------HALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADY 1131

Query: 1577 SRPACVPESVLRSVDFHAL------EDALKIKFKDRGLLVEAITHASRPSS--GVSCYQR 1628
            +    +P+   +S D + L      E+ L  +FK   LL  A TH S PS+   V CYQR
Sbjct: 1132 TSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQR 1191

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTD------------------LRAAAVNNENF 1670
            LEF+GD++LD +    LF+ Y +  P  LT+                  L+ A V+N+  
Sbjct: 1192 LEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKVSVRLFVSTKHLLTITLQMAMVSNKFL 1251

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKV------ 1723
              +AVK  LH HLRH S+ L  QI  + +E+   E    G   + L     PKV      
Sbjct: 1252 GALAVKLGLHTHLRHFSNPLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKVRRCPGC 1311

Query: 1724 LGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
            L D+VE+  GA F+DS     VV   FQ
Sbjct: 1312 LPDMVEAYLGAAFVDSDFQFRVVEDFFQ 1339


>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
          Length = 1634

 Score =  249 bits (636), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 205/735 (27%), Positives = 349/735 (47%), Gaps = 104/735 (14%)

Query: 267 WEADHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLET 326
           ++A       E  G +++    + K S ++E +     R YQ+++ E+AK +NTIA L+T
Sbjct: 139 FQATKGSTAPETKGDDKQSVKWLIKDSGSQEII--SSPREYQIELFEKAKTQNTIAVLDT 196

Query: 327 GAGKTLIAVLLIRSICND-LQRQNK---KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHY 382
           G+GKTLIA LL+R + ++ L+R+     K +A FLV  V LV+QQ  V++    + +  +
Sbjct: 197 GSGKTLIAALLLRHVIDEELERRENGGDKRIAFFLVDSVALVFQQYAVLKCNLNHKMEQF 256

Query: 383 CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKH 442
           CG+MG D W  + W++ F+   V+V TA++L   L HS I M+ INLLI DE HHA + H
Sbjct: 257 CGDMGCDLWSKELWEKHFNENMVIVCTAEVLFQCLHHSFITMKQINLLIFDEAHHAKRNH 316

Query: 443 PYSLVMSEFYHTTSKEKR-PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK 501
            Y+ ++ +FY +   +   P +FGMTASPV+     ++ +       LE+ L S + T  
Sbjct: 317 AYARIIKDFYASEPDQSLVPRIFGMTASPVD-----ARTNIKRGAAELEALLHSQIATAS 371

Query: 502 DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDA 561
           D                     ASL     +  + EVA   A   S+    ++ +     
Sbjct: 372 D---------------------ASLLQYTNKKTKEEVAYYNALPPSTESQLFKKVNQLVG 410

Query: 562 GAKEELRQV-YGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDER 620
           G KE  + + Y V+                    A  +LG W A +V     T  ++ +R
Sbjct: 411 GIKECSKPLEYAVT--------------------ASSDLGSWIADRVLLISFTG-EDVKR 449

Query: 621 ANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEG-ELLD 679
              +++  F                       K A++       +E    +++   +++ 
Sbjct: 450 LEAKIESNFH----------------------KQAQIDPIPLSNLENRKEKLQSAQQIIM 487

Query: 680 SHVVSGGEHVDVIIGAAVADGKVTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAALVLP 738
           +HV +  +         ++  +++ KV +L  K+  +++ T   + I+FV++   A +L 
Sbjct: 488 AHVFASPQ---------LSRSQLSSKVLALASKLRERFERTTFDKCIVFVKQRYTAKLLA 538

Query: 739 KVFAELPSLS--FVKSASLIG---HNNSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEE 792
            +FA  P +    ++  SL G    N +    +F+ Q  T+ +FR G +  L ATSVAEE
Sbjct: 539 DLFAR-PQIGTPHLRVGSLTGTRNRNGADLEASFRNQVITLRRFRQGEINCLFATSVAEE 597

Query: 793 GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEET 852
           GLDI  CN+VIRFDL  TV+ YIQSRGRAR+  S Y   IERG+      +R  R +E  
Sbjct: 598 GLDIPDCNLVIRFDLYSTVIQYIQSRGRARQDNSVYFHFIERGSKVEDALVREVRRNENI 657

Query: 853 LRK--EAI--ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL 908
           L++  +A+  +R    +  +    ++ +      Y   STGA ++   ++ ++  + + L
Sbjct: 658 LKEFCQALPEDRLLSGNNYNMDYFLAKERNIMRTYTEPSTGAKLTYRMSLSVLANFVASL 717

Query: 909 PSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAA 968
           P    S   PE++M          +Y C++ LP N+P     G   ++ ++A+ +    A
Sbjct: 718 PHSSESTPHPEYMMT-----AMGVKYVCEVILPENSPVHGAIGRPANTKQVAKCSAAFEA 772

Query: 969 CKKLHEMGAFTDMLL 983
           C  L +     + LL
Sbjct: 773 CLNLRKGKHLDEYLL 787



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 239/611 (39%), Gaps = 111/611 (18%)

Query: 1274 LEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
            LEYS     +K         + QP+I G  + + +N L       ++ +        K Y
Sbjct: 1012 LEYS--CSLFKVARSKRTFSETQPVIEGDVIPFRRNFL-------DDHDDPANSGPTKCY 1062

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
             V   PE   I  LP  +V  A   P+I+ R+ES L+A++    ++ P+ A   LE +T 
Sbjct: 1063 VV---PEPLTISALPTRIVAMAYTFPAIIHRIESYLVAVEACSMLHLPISADLALECMTK 1119

Query: 1394 ASC--------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
             +         Q  F       YER E LGD +LK   S  L+  +P  +E      R  
Sbjct: 1120 DTRNTDEHGEEQVEFQRGMGNNYERLEFLGDCFLKMATSISLYTLHPDSNEFDFHVKRML 1179

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAED 1499
            M+ N  L   AL   L  +I++  F    W   G++       K G ++     ++  + 
Sbjct: 1180 MICNKNLMDVALQLKLYEFIRSQAFNRRAWYPEGLV------LKKGKAA-----QAPKKH 1228

Query: 1500 KLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK-DAANHL 1558
            KLG                              KT+ADV EALIG   +      A +H 
Sbjct: 1229 KLG-----------------------------DKTIADVSEALIGAALLTPSNGHAMDHA 1259

Query: 1559 MKWIGIQVESDPEEV----------GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGL 1608
            ++ +   V S    +            P        +  R+V    +E      F    L
Sbjct: 1260 VRAVTELVYSTDHAIEKWEDYFKGYTKPKYQIAASTASQRNVA-EQIEITHNYHFHYPRL 1318

Query: 1609 LVEAITHASRPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            L  A TH S P +   V  YQRLEF+GD++LD      LF  +    P  LT+ + A V+
Sbjct: 1319 LRSAFTHPSYPFAYERVPNYQRLEFLGDSLLDMACVNFLFHRFPTKDPQWLTEHKMAMVS 1378

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-------------ELLKPGFNSF 1713
            N+    V V    H  L   +  +   I ++V E+ E             +L       +
Sbjct: 1379 NQFLGAVCVALGFHTQLLQFNPIIQGSITEYVCEITEAREQAEQDAIRHGKLASECARDY 1438

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPV 1768
             L     PK L DI+E+  GAIF+DS  +   V + F   +       TL       HPV
Sbjct: 1439 WLHTKLPPKCLPDIIEAYIGAIFVDSSFNYGEVERFFDLHMKWYFEDITLYDTFANKHPV 1498

Query: 1769 RELQERCQQQ---AEGLEYKASR----SGN----LATVEVYIDGVQVGVAQNPQKKMAQK 1817
              L +  QQ    A+ +   +S     SG     LATV ++   + VGV ++   + A+ 
Sbjct: 1499 TFLHKFLQQNMGCAKNIITASSMPDDASGTPPKILATVMIH-SQILVGVERD-SARYAKI 1556

Query: 1818 LAARNALAVLK 1828
              A+ AL +LK
Sbjct: 1557 AVAQQALEILK 1567


>gi|376336566|gb|AFB32888.1| hypothetical protein 0_6448_02, partial [Abies alba]
          Length = 150

 Score =  248 bits (632), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 121/150 (80%), Positives = 129/150 (86%), Gaps = 3/150 (2%)

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
            NSFGLGD KAPKVLGDIVESIAGAIFLD   DT+ VW+VFQPLL PMVTPETLPMHPVRE
Sbjct: 1    NSFGLGDFKAPKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRE 60

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            LQERCQQQAEGLEYKASR+GN+ATVEVY+DGVQ+G AQNPQKKMAQKLAARNAL +LKEK
Sbjct: 61   LQERCQQQAEGLEYKASRTGNMATVEVYVDGVQIGFAQNPQKKMAQKLAARNALVILKEK 120

Query: 1831 ETAEAKEKGDENG---KKRKNGTQTFTRQT 1857
            E  E K  G  NG     +KNG QTFTRQT
Sbjct: 121  EAEETKADGVSNGDGAAGKKNGNQTFTRQT 150


>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
 gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
          Length = 2029

 Score =  246 bits (628), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 223/744 (29%), Positives = 338/744 (45%), Gaps = 107/744 (14%)

Query: 302  EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVP 359
            E  R YQ ++LE AKK+N I  L TG GKT IAV+LIR +   + +  K+    ++F+V 
Sbjct: 336  ENVRLYQKELLECAKKENVIVTLGTGTGKTFIAVMLIREMSESVHQPLKEGGKRSLFIVD 395

Query: 360  KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            KVPLV QQAE IR  T   VG + G +G D W A+ W   FD   VLVMTA+I  NIL H
Sbjct: 396  KVPLVKQQAEHIRINTNLKVGEFHGALGVDCWSAKIWMEFFDKFHVLVMTAEIFRNILTH 455

Query: 420  SIIKMEAINLLILDECHHAVKKHPYSLVMSEF---YHTTSKEKRPSVFGMTASPVNLKGV 476
              IK + +NL++ DECHHA K+HPY  +M  +   Y+      +P + G+TAS +N KG 
Sbjct: 456  GFIKFDIVNLIVFDECHHATKQHPYKKIMELYKLCYNNNDSGIQPRILGLTASVMNKKGD 515

Query: 477  SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
               +  AI+  NLE+ L S V      + L+ +   P   +V   K  + +  HE L   
Sbjct: 516  EIGLQKAIR--NLETTLCSRVVGTSHAELLKLYSADPHIAIVAC-KNDNKYDWHE-LDLF 571

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
               +  + Q S  R   +  G               VS   +     +++ KL +I   +
Sbjct: 572  FQHLVRSTQKSLERCGRECEG--------------NVSLYIQH--VCDVLAKLDSI---M 612

Query: 597  GELGQWCAYKVAQSFL-----------TALQNDERAN-YQLDVKFQESYLSKVVSLLQ-C 643
            G+LG WCA +V +  L           T L +DE  N + L     ++  S  + +L+ C
Sbjct: 613  GQLGPWCALQVCKQMLQSTTNLATRISTLLADDEDNNLFSLFTSGSDASSSVWLEVLKTC 672

Query: 644  ELVEGAVSKKDAKVVDSENGF----------------VEGGTNEIEEGELLDSHVVSGGE 687
              V     K+   +VDS                    V     +   G LL S  ++   
Sbjct: 673  LKVTSVKLKRHIGLVDSVQKLKCVFIRQQFVDQQQQAVWNCIRQSTPGSLLYSGELNFQL 732

Query: 688  HVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL 747
              +        +G   P  Q LI    K Q     R+  ++E  V  +V  ++ AE+   
Sbjct: 733  EKNNSRKFENTNGANGPPFQILIDTAKKLQP----RSYSYLE--VDYVVGSRMSAEVAEP 786

Query: 748  SFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
            SF +                  +E +  FR G++ LL ATS+ EEG+D+R CN VIRFD 
Sbjct: 787  SFARQ-----------------EEVLKNFRHGKLNLLAATSILEEGIDVRHCNYVIRFDT 829

Query: 808  AKTVLAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHL 866
              T  +++QS+GRAR+  + Y ++++   L S    L +   +E+ L+    +   L+  
Sbjct: 830  PLTFRSFVQSKGRARQKIAYYTILVQDRFLESFQEMLNSFVETEKFLKVNGRDLNILTRT 889

Query: 867  KDTSRLIS-------------------VDAV--PGTVYQVES----TGAVVSLNSAVGLI 901
            KD  R  S                   VD++  P   Y  E+      A + L+SA  +I
Sbjct: 890  KDRDRSYSGNNDQVDNCRKEVNLPNGDVDSLVEPYYTYFEENGLVKKAACLVLSSAHNVI 949

Query: 902  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLA 960
              YC++L  DR++   P+F ++          Y   +QLP  +P  +K+EG    + +LA
Sbjct: 950  KRYCNKLRKDRFADSSPKFSVQTILNKDLSISYVATVQLPTTSPLKKKIEGKPMQNAKLA 1009

Query: 961  QQAVCLAACKKLHEMGAFTDMLLP 984
            + A      K LH MG   + L+P
Sbjct: 1010 EMAAAFETAKMLHAMGELNEFLIP 1033



 Score =  171 bits (432), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 216/441 (48%), Gaps = 58/441 (13%)

Query: 1381 PVPASK-ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
            P P  + +L ALT    Q+ F  E  E LGD++LK++VS  +F+K    +EG+LT +R +
Sbjct: 1536 PGPQCRDVLRALTLRKAQDMFDLESMEALGDSFLKFIVSLHVFIKETNWNEGRLTSLRSE 1595

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGVLPVFD-EDTKDGDSSLFDQEKSVA 1497
            +VSN  L+     K LQ+ + A  F P+ +W  P    +   E   +  + L D+     
Sbjct: 1596 IVSNTNLFNLGKQKLLQAKLTAVPFDPTAQWLPPCFRSLAALESGYESVNELIDE----- 1650

Query: 1498 EDKLGTDKNYNEYEDDDM-------EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
                G  K  NE    +        E  E+   + +++V+  K++AD VEAL+G Y +E 
Sbjct: 1651 ----GDSKKKNEALKANTPTPVVVAERYEMCSLNRTHQVIYDKSIADCVEALVGCYLLEA 1706

Query: 1551 GKDAANHLMKWIGIQVESD--------------PEEVGCPSRPACV-PESVLRSV----D 1591
            G   A  L+KW GI ++ +                   C      + PE+ + S+    D
Sbjct: 1707 GMRPAIKLLKWFGIDIDGNLMNLLSSSSSSSSSSSTAFCSENCVLIGPEAKIHSIWTAYD 1766

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASR---PSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
             ++ E  +  +F ++  L++A+TH+S     +     Y+RLEF+GDA+LD+LI++HL+ S
Sbjct: 1767 LNSFEAKIGYRFTNKAYLIQALTHSSYNEVETPVTDSYERLEFLGDAILDYLISRHLYSS 1826

Query: 1649 YTNLPPGRLTDLRAAAVNNE----NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
                 PG L+DLRAA VNN     N   ++V  +  + +R    +++     ++ E  ++
Sbjct: 1827 KRIRSPGLLSDLRAALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQD 1886

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL- 1763
              +   + F     + PK LGDI ES+AGAIFLDS    + VWQV+  ++   +  +   
Sbjct: 1887 DDEKETSEFA-EHVEVPKPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQRSD 1945

Query: 1764 -----------PMHPVRELQE 1773
                       P+ PVR L E
Sbjct: 1946 FTSFNKCLCHPPISPVRHLLE 1966



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 23/137 (16%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            ++V ++    T  S FP K        Y S+A+Y++    V+++ K QPL+  + VS+ +
Sbjct: 1234 YFVTAVDNTCTPMSPFPLKM-------YRSFAEYFEVTKQVKVLDKNQPLLSVKMVSFKR 1286

Query: 1309 -NLLSPR------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI 1361
             NLL  +      F+  ++           + +  L PEL  IHP+P S+ R    LP++
Sbjct: 1287 LNLLCEKPISILLFDFDDDA---------NSCHCKLVPELVIIHPMPASMWRCLIFLPTV 1337

Query: 1362 MRRVESMLLAIQLKDKI 1378
            + R+  +L+A QL+ +I
Sbjct: 1338 LYRMNHLLIAEQLRLQI 1354


>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
 gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
 gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
          Length = 1910

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 220/755 (29%), Positives = 365/755 (48%), Gaps = 91/755 (12%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
            R YQ+++L++A KKNTI  L TG+GKT IAVLL++     +   L +  K+  A F+V K
Sbjct: 14   RDYQVELLDKATKKNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKR--AFFVVEK 71

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ-VLVMTAQILLNILRH 419
            V LV QQA  I   T + VG   G+     WD++    +F  +  V+V+TAQ LL+++RH
Sbjct: 72   VNLVEQQAIHIEVHTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQCLLDLIRH 131

Query: 420  SIIKMEAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + +K+E + +LI DECHHA+  +HPY  +M ++      +  P V G+TAS +  K    
Sbjct: 132  AYLKIEDMCVLIFDECHHALGSQHPYRSIMVDYKLLKKDKPVPRVLGLTASLIKAKVAPE 191

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVV-VEYDKAASLWSLHEQLKQME 537
            ++   +K   LES +DSV+ T  D   L K+   P EVV +  D       +      +E
Sbjct: 192  KLMEQLK--KLESAMDSVIETASDLVSLSKYGAKPYEVVIICKDFEIGCLGIPNFDTVIE 249

Query: 538  VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
            +  E  A  ++     +F    D   +  ++                    L+       
Sbjct: 250  IFDETVAFVNTTT---EFHPDLDLDPRRPIKD------------------SLKTTRAVFR 288

Query: 598  ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
            +LG W A++ AQ +   L    ++    D   +   ++K   +    L+E  + K   K 
Sbjct: 289  QLGPWAAWRTAQVWEKELGKIIKSQVLPDKTLRFLNMAKTSMITIKRLLEPEMKK--IKS 346

Query: 658  VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
            +++   +V      I   E+L++                       P+ Q   K  +K +
Sbjct: 347  IEALRPYVPQRV--IRLFEILET---------------------FNPEFQ---KERMKLE 380

Query: 718  HTEDFRAIIFVERVVAA----LVLPKVFAELPSLSFVKSASLIG-------HNNSQEMRT 766
              E   AIIFV++   A    L++  + +  P   FV    ++G        ++SQ +  
Sbjct: 381  KAEHLSAIIFVDQRYIAYSLLLMMRHIKSWEPKFKFVNPDYVVGASGRNLASSDSQGLHK 440

Query: 767  FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
             Q  E + +F    +  L+ATSV EEG+D++QCN+VI+FD    + +Y+QS+GRAR+ GS
Sbjct: 441  RQT-EVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAGS 499

Query: 827  DYILMIERGNLSHA-TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV--Y 883
             Y++ +E  + +   + L++ +  E+ L      RT  + ++D S       V   +  Y
Sbjct: 500  RYVITVEEKDTAACDSDLKDFQQIEKILLSR--HRTVNNPIEDDSDRFEEFDVDSQMEPY 557

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
             VE TGA + +++A+ LI+ YCS+LPSD ++ L P   +   E+  G T+Y  +L LP N
Sbjct: 558  VVEKTGATLKMSTAIALINRYCSKLPSDIFTRLVPHNQIIPIEE-NGVTKYCAELLLPIN 616

Query: 944  APFEK---LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
            +P +    L+ P+  + + AQ AV L AC++LH  G   D LLP KG     + ++  DE
Sbjct: 617  SPIKHAIVLKNPM-PNKKTAQMAVALEACRQLHLEGELDDNLLP-KGRESIAKLLEHIDE 674

Query: 1001 --GEPLPGTA------RHREFYPEGVADILQGEWI 1027
               E  PG A      + ++ Y + +A  L   ++
Sbjct: 675  EPDEYAPGIAAKVGSSKRKQLYDKKIARALNESFV 709



 Score =  206 bits (524), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 241/508 (47%), Gaps = 69/508 (13%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L ALT ++  +    ER E +GD++LK+  + +L+     +HEG+L+  R + VSN  L
Sbjct: 1397 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLLDQHEGKLSFARSKEVSNCNL 1456

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            Y+     G+   I A++F A   W  P  +P  D    + D    D E+   E +   D 
Sbjct: 1457 YRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTD----DAEEKDNEIERILDG 1512

Query: 1506 NYNEYEDDDMEDGELEGDSSS--------------------------YRVL-----SSKT 1534
               E + ++    ++ GD S                           Y +L     S K+
Sbjct: 1513 QVIEEKPENKTGWDIGGDVSKSTTDGIETITFPKQARVGNDDISPLPYNLLTQQHISDKS 1572

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS---RPACVP-------- 1583
            +AD VEALIGV+ +  G +    +M W+G++V    ++   PS   R    P        
Sbjct: 1573 IADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLRFIDTPTNPNASLN 1632

Query: 1584 --ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHL 1640
               ++ +   F  LE+ +  +FK+R  LV+A THAS  ++ V+ CYQRLEF+GDAVLD++
Sbjct: 1633 FLNNLWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYM 1692

Query: 1641 ITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE 1700
            IT++LF       PG LTDLR+A VNN  FA +AVK +   H       L   I  FVK 
Sbjct: 1693 ITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLYHMIEKFVKL 1752

Query: 1701 VLEELLKPGFNS-------------FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
              E      FN+                 D + PK +GDI ES+AGAI+LDSGR+    W
Sbjct: 1753 CSERNFDTNFNAEMYMVTTEEEIDEGQEEDIEVPKAMGDIFESVAGAIYLDSGRNLDTTW 1812

Query: 1748 QVFQPLLDPMV--TPETLPMHPVRELQERCQQQAEGLEY-KASRSGNL-ATVEVYIDGVQ 1803
            QV   ++   +       P  P+REL E  Q +    +  +   SG +  TVEV  +   
Sbjct: 1813 QVIFHMMRGTIELCCANPPRSPIRELMEFEQSKVRFSKMERILESGKVRVTVEVVNNMRF 1872

Query: 1804 VGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             G+ +N   ++A+  AA+ AL  L + E
Sbjct: 1873 TGMGRN--YRIAKATAAKRALKYLHQIE 1898



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 31/172 (18%)

Query: 1231 NAGDLEGRIVTAAHSGKR----FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQK 1286
            NA D +  IV   +        +YV  I  E    S FP          + ++ +Y+ +K
Sbjct: 871  NAEDYKDAIVMPWYRNLEQPVFYYVAEILPEWRPSSKFPDTH-------FETFNEYFIKK 923

Query: 1287 YGVELIFKKQPLIRGRGVSYCKNLLSPRFEH--------------------SEEQEGEGE 1326
            Y +E+  + Q L+     S   NLL PR ++                    + + +    
Sbjct: 924  YKLEIYDQNQSLLDVDFTSTRLNLLQPRIQNQPRRSRTVSNSSTSNIPQASASDSKESNT 983

Query: 1327 EILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
             +   +    L PEL  IHP+  +L      LPSI  RV  +LL  +L++ I
Sbjct: 984  SVPHSSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQLLLTDELRETI 1035


>gi|425772078|gb|EKV10503.1| RNA helicase/RNAse III, putative [Penicillium digitatum Pd1]
 gi|425777255|gb|EKV15436.1| RNA helicase/RNAse III, putative [Penicillium digitatum PHI26]
          Length = 1372

 Score =  244 bits (622), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 207/667 (31%), Positives = 307/667 (46%), Gaps = 115/667 (17%)

Query: 323 FLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV 378
            L+TG+GKTL+AVLL++ I     N      K  +A FLV  V LV+QQ+ V+R      
Sbjct: 80  LLDTGSGKTLVAVLLLKHILQMELNKRAHGTKPRVAFFLVDTVTLVFQQSAVLRNNLDQK 139

Query: 379 VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHA 438
           V H+ G +G D WD Q W +  +   V+V TA+IL   L +  I+++ INLLI DE HHA
Sbjct: 140 VAHFFGNLGPDLWDKQTWDKHLEKYMVIVCTAEILNQSLLNGHIRIDQINLLIFDEAHHA 199

Query: 439 VKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVC 498
            K+HP++ ++ + Y     E RP +FGMTASPV+ K      D A     LE+ LDS + 
Sbjct: 200 KKEHPFARIIRDAYLKADIENRPRIFGMTASPVDAK-----CDLAEAAVQLETLLDSRIA 254

Query: 499 TIKDRKELEKHVPMPSEVVVEYDK--AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFM 556
           T  D   L   V  P EV   YDK    S  +LH  LK                      
Sbjct: 255 TTSDLTLLRNFVNKPMEVEWVYDKLPPPSETNLHSTLK---------------------- 292

Query: 557 GARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQ 616
                               T+      L    R  + A  ELG WCA +V         
Sbjct: 293 --------------------TKYGDMLILEGVFRFASVASTELGGWCADQVWA------- 325

Query: 617 NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGE 676
                     +   +  L K         +EG++     KV DS+    E  + EI+  +
Sbjct: 326 ----------LALADEVLPK---------LEGSI----GKVTDSDPRDSEKASEEIKRIQ 362

Query: 677 LLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAAL 735
              SH+V+     + I   A     ++PK++ L+ K+  ++  + D + I+F +R   A 
Sbjct: 363 EA-SHLVN-----EYITDRAFMPSDLSPKLELLMGKLQEQFAKSPDTKCIVFTQRRNTAK 416

Query: 736 VLPKVFAEL--PSLS-----FVKSASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVAT 787
           V+ ++  +L  P+L       V+    IG N+     TF+ Q   +AKFR   V  L AT
Sbjct: 417 VMLQLCEKLQIPNLRPEILVGVRKGDAIGMNS-----TFRRQFLVLAKFRKSEVNCLFAT 471

Query: 788 SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR 847
           SVAEEGLDI  CN+V+RFDL  T + Y+QSRGRAR+  S Y  M+E GN +H+  L+  R
Sbjct: 472 SVAEEGLDIPDCNLVVRFDLYDTFIQYVQSRGRARRADSVYATMVECGNRNHSMRLQEVR 531

Query: 848 NSEETLRKEAI----ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
            +E  ++        +R       D   L+  +    T Y V  TGA+++   A+G++  
Sbjct: 532 RAEHLMKNFCNLLPEDRKLYGDGHDMGVLVHEENRKRT-YTVTRTGAMLTYRHAIGVLAR 590

Query: 904 YCSQLP-SDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQ 962
           + S L   +  S      +M  +E       +SC++ +P  +P  ++ G   S   LA+Q
Sbjct: 591 FASSLQYENEISAKVTYVVMSENES------FSCEVIMPEKSPVRRVLGCCESKKSLAKQ 644

Query: 963 AVCLAAC 969
           +    AC
Sbjct: 645 SAAFDAC 651



 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 171/369 (46%), Gaps = 49/369 (13%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER ELLGD+ LK   S  LF++ P   E      R  ++ N  L++ A    L  +I++
Sbjct: 1023 YERLELLGDSVLKMATSISLFVQNPDDDEYDYHVNRMCLICNKNLFKNATELKLYEFIRS 1082

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W  PG+             SL                   EY  D  +  + E
Sbjct: 1083 RGFSRHMWYPPGL-------------SL-------------------EYGRDHAKFVDSE 1110

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVGCPS--- 1577
            G  S    LS KT+ADV EALIG   + GG D    + +K + + V S            
Sbjct: 1111 GKHS----LSEKTIADVCEALIGASLLSGGDDHRYDMAVKAVTVFVNSQKHTATSWKDYI 1166

Query: 1578 RPACVPESVLRSVDFHALEDALKI------KFKDRGLLVEAITHASRPSS--GVSCYQRL 1629
                +P    ++ D   +  A +I      +FK   LL  A TH S P +   V CYQRL
Sbjct: 1167 SAYSIPLYQKKAADGFEMNLAQQIFEKVGYEFKYPRLLRSAFTHPSYPLTWAKVPCYQRL 1226

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            E++GDA+LD +  +HLF  +    P  LT+ + A V+N+    +AVK  LH+HL+H S+ 
Sbjct: 1227 EYLGDALLDMVCVEHLFHRFPTRDPQWLTEHKMAMVSNKFLGALAVKLGLHLHLQHFSNP 1286

Query: 1690 LDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            L  Q   + +E+ L E    G  ++ L    +PK L D++E+  GAIF+DS  D +V+  
Sbjct: 1287 LMIQNSKYAEELQLAESESNGEVNYWLSTSDSPKCLPDMLEAYLGAIFVDSSFDFTVIEA 1346

Query: 1749 VFQPLLDPM 1757
             F+  + P 
Sbjct: 1347 FFKRHILPF 1355



 Score = 54.3 bits (129), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 39/191 (20%)

Query: 1368 MLLAIQLKDKINYPVPASKIL-EALTAASCQETF----CYERAELLGDAYLKWVVSRFLF 1422
            M LA Q+ +K+ Y     ++L  A T  S   T+    CY+R E LGDA L  V    LF
Sbjct: 1184 MNLAQQIFEKVGYEFKYPRLLRSAFTHPSYPLTWAKVPCYQRLEYLGDALLDMVCVEHLF 1243

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDT 1482
             ++P +    LT  +  MVSN  L   A+  GL  ++Q   F+          P+  +++
Sbjct: 1244 HRFPTRDPQWLTEHKMAMVSNKFLGALAVKLGLHLHLQ--HFSN---------PLMIQNS 1292

Query: 1483 KDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEAL 1542
            K      + +E  +AE +   + NY     D                 S K L D++EA 
Sbjct: 1293 K------YAEELQLAESESNGEVNYWLSTSD-----------------SPKCLPDMLEAY 1329

Query: 1543 IGVYYVEGGKD 1553
            +G  +V+   D
Sbjct: 1330 LGAIFVDSSFD 1340


>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 1630

 Score =  244 bits (622), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 192/695 (27%), Positives = 331/695 (47%), Gaps = 83/695 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLVPKV 361
           R YQL++LE  KK NTI +L TG+GKT IA +L++S+ + L +   Q KK    F+V  V
Sbjct: 14  RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKW-TFFIVQSV 72

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           PLV QQA  +R    + +G + G+M  DFW  Q+W    +   +LVMTAQI LN LRH  
Sbjct: 73  PLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGY 132

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLKGVSSQV 480
           + ++  NLLI DECHHAV  HP+  +M   + T  K ++RP + G+TA+ +N    ++  
Sbjct: 133 MHIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDERPRILGLTATLIN----ANTK 188

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +   ++  L+   ++ + T  D   ++     P E +  YD+    + L +++K +   V
Sbjct: 189 NVKEELTKLQITFNATIKTRYD-DNIQIFSARPKEFIRLYDE----YILDDEIKAI---V 240

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           +    ++    K Q    +    KE     Y   ++  S   AN    + A    L + G
Sbjct: 241 KRLNTNTCNLRKIQ-APMKIEPIKENNETYYLEYQKQASKNFANYFLDIEA---NLVDGG 296

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            + AY V   F+  ++   +              +K ++++   L E  +++K   + D 
Sbjct: 297 AYIAYLVTWHFMVEIEKKRKICTD----------AKRLTIMSLVLSELTITRK--MLYDY 344

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
            N                        +H+ +  G +      +PK++ LI+IL   + T+
Sbjct: 345 MN------------------------KHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD 380

Query: 721 DFRAIIFVERVVAALVLPKVFAELPS--------LSFVKSASLIGHNNSQEM--RTFQMQ 770
               ++FV+R   A +L     +             F+  A  I   + +EM  +  Q  
Sbjct: 381 --TCLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNN 438

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           + I KF D  + +L+ + V EEG+DI+ CN VIR+D  K   +YIQS+GRAR   S +IL
Sbjct: 439 DIIKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFIL 498

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
           M+        T     +  EE ++   +   D+    +  ++         V+  E+  A
Sbjct: 499 MVPNQLKFQKTQTEYNKMEEEIVK--LLVDNDIDDENNDEKMTE-------VFHTETDRA 549

Query: 891 VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-L 949
           +++   A+ +I+ YC  LP DR++ L PE+ M ++           KL+LP N+  +  +
Sbjct: 550 LLTHEIAISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSK----KYKLKLPINSVIKTPI 605

Query: 950 EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +G  C++ + A+++    AC  L+++GA  + L+P
Sbjct: 606 DGLFCTNKKNAKKSAAFNACIALYKIGALDENLMP 640



 Score =  166 bits (421), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 207/436 (47%), Gaps = 52/436 (11%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S IL+ +T     + F YER E  GD++LK+ VS  LF  +P  +EG LT ++ ++V N 
Sbjct: 1135 SDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNR 1194

Query: 1445 VLYQYALSKGLQSYIQADRFAPSR-WAAP--GVLPVFDEDTKDGD-SSLFDQEKSVAEDK 1500
             L     +  L SY+  + F P+  W  P  GV     E  ++G+  S    + ++  D 
Sbjct: 1195 NLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDN 1254

Query: 1501 LGT----DKNYNEYE---------------DDDMEDGELE-GDSSSYRVL-----SSKTL 1535
              T    D+ + E E               D D EDG  + G S S   L     S K +
Sbjct: 1255 QTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGHSQSDLFLHKQSVSDKMV 1314

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD VE+LIG Y  + G +    +++ +GI     P++     +P  + + +   +DF   
Sbjct: 1315 ADCVESLIGTYVYKRGVEVGFKVLQGLGII----PKQFIDTFKPKPI-DDLYDGLDFSKI 1369

Query: 1593 ----HALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
                  LE  +   FK + LL +A+TH +       CYQRLEF+GDA+LD LIT ++   
Sbjct: 1370 LPGYELLERRIGYSFKHKHLLAQALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEH 1429

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
              +  PG +TD+R++ VNN  FA ++ +  LH  +   S  +   I  F +   +   K 
Sbjct: 1430 CYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKI 1489

Query: 1709 GFNSFGL---GDCKA------PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            G     L    DC A      PKVLGD+ ES+  AI+LD  RD + VW +    L+  + 
Sbjct: 1490 GQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIK 1549

Query: 1760 P--ETLPMHPVRELQE 1773
               + +P +P+R L E
Sbjct: 1550 EFCDNVPKNPIRILHE 1565



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            +R+ V  + ++MT ESSFP  E       Y +YA Y+  KY +++  K QP+I+ + +  
Sbjct: 866  QRYIVTDVYWDMTPESSFPTSE-------YDTYATYFSDKYSIQVAHKNQPMIKVKSLGV 918

Query: 1307 CK-NLLSPRFEHSE-EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
             K N L PR    + ++  E  EI        L PE C  H  P      A  LP+++ R
Sbjct: 919  SKINYLVPRISTGKIDKRSEYIEI--------LVPEFCTWHKFPSVYWLKALMLPTLLYR 970

Query: 1365 VESMLLAIQLKDKIN 1379
            ++ +LLA  L  KIN
Sbjct: 971  LDKLLLAEDLLVKIN 985


>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 1648

 Score =  243 bits (621), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 192/695 (27%), Positives = 331/695 (47%), Gaps = 83/695 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLVPKV 361
           R YQL++LE  KK NTI +L TG+GKT IA +L++S+ + L +   Q KK    F+V  V
Sbjct: 14  RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKW-TFFIVQSV 72

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           PLV QQA  +R    + +G + G+M  DFW  Q+W    +   +LVMTAQI LN LRH  
Sbjct: 73  PLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGY 132

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLKGVSSQV 480
           + ++  NLLI DECHHAV  HP+  +M   + T  K ++RP + G+TA+ +N    ++  
Sbjct: 133 MHIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDERPRILGLTATLIN----ANTK 188

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +   ++  L+   ++ + T  D   ++     P E +  YD+    + L +++K +   V
Sbjct: 189 NVKEELTKLQITFNATIKTRYD-DNIQIFSARPKEFIRLYDE----YILDDEIKAI---V 240

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           +    ++    K Q    +    KE     Y   ++  S   AN    + A    L + G
Sbjct: 241 KRLNTNTCNLRKIQ-APMKIEPIKENNETYYLEYQKQASKNFANYFLDIEA---NLVDGG 296

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            + AY V   F+  ++   +              +K ++++   L E  +++K   + D 
Sbjct: 297 AYIAYLVTWHFMVEIEKKRKICTD----------AKRLTIMSLVLSELTITRK--MLYDY 344

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
            N                        +H+ +  G +      +PK++ LI+IL   + T+
Sbjct: 345 MN------------------------KHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD 380

Query: 721 DFRAIIFVERVVAALVLPKVFAELPS--------LSFVKSASLIGHNNSQEM--RTFQMQ 770
               ++FV+R   A +L     +             F+  A  I   + +EM  +  Q  
Sbjct: 381 --TCLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNN 438

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           + I KF D  + +L+ + V EEG+DI+ CN VIR+D  K   +YIQS+GRAR   S +IL
Sbjct: 439 DIIKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFIL 498

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
           M+        T     +  EE ++   +   D+    +  ++         V+  E+  A
Sbjct: 499 MVPNQLKFQKTQTEYNKMEEEIVK--LLVDNDIDDENNDEKMTE-------VFHTETDRA 549

Query: 891 VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-L 949
           +++   A+ +I+ YC  LP DR++ L PE+ M ++           KL+LP N+  +  +
Sbjct: 550 LLTHEIAISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSK----KYKLKLPINSVIKTPI 605

Query: 950 EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +G  C++ + A+++    AC  L+++GA  + L+P
Sbjct: 606 DGLFCTNKKNAKKSAAFNACIALYKIGALDENLMP 640



 Score =  166 bits (421), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 207/436 (47%), Gaps = 52/436 (11%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S IL+ +T     + F YER E  GD++LK+ VS  LF  +P  +EG LT ++ ++V N 
Sbjct: 1153 SDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNR 1212

Query: 1445 VLYQYALSKGLQSYIQADRFAPSR-WAAP--GVLPVFDEDTKDGD-SSLFDQEKSVAEDK 1500
             L     +  L SY+  + F P+  W  P  GV     E  ++G+  S    + ++  D 
Sbjct: 1213 NLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDN 1272

Query: 1501 LGT----DKNYNEYE---------------DDDMEDGELE-GDSSSYRVL-----SSKTL 1535
              T    D+ + E E               D D EDG  + G S S   L     S K +
Sbjct: 1273 QTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGHSQSDLFLHKQSVSDKMV 1332

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD VE+LIG Y  + G +    +++ +GI     P++     +P  + + +   +DF   
Sbjct: 1333 ADCVESLIGTYVYKRGVEVGFKVLQGLGII----PKQFIDTFKPKPI-DDLYDGLDFSKI 1387

Query: 1593 ----HALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
                  LE  +   FK + LL +A+TH +       CYQRLEF+GDA+LD LIT ++   
Sbjct: 1388 LPGYELLERRIGYSFKHKHLLAQALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEH 1447

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
              +  PG +TD+R++ VNN  FA ++ +  LH  +   S  +   I  F +   +   K 
Sbjct: 1448 CYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKI 1507

Query: 1709 GFNSFGL---GDCKA------PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            G     L    DC A      PKVLGD+ ES+  AI+LD  RD + VW +    L+  + 
Sbjct: 1508 GQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIK 1567

Query: 1760 P--ETLPMHPVRELQE 1773
               + +P +P+R L E
Sbjct: 1568 EFCDNVPKNPIRILHE 1583



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            +R+ V  + ++MT ESSFP  E       Y +YA Y+  KY +++  K QP+I+ + +  
Sbjct: 866  QRYIVTDVYWDMTPESSFPTSE-------YDTYATYFSDKYSIQVAHKNQPMIKVKSLGV 918

Query: 1307 CK-NLLSPRFEHSE-EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
             K N L PR    + ++  E  EI        L PE C  H  P      A  LP+++ R
Sbjct: 919  SKINYLVPRISTGKIDKRSEYIEI--------LVPEFCTWHKFPSVYWLKALMLPTLLYR 970

Query: 1365 VESMLLAIQLKDKIN 1379
            ++ +LLA  L  KIN
Sbjct: 971  LDKLLLAEDLLVKIN 985


>gi|302422698|ref|XP_003009179.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
 gi|261352325|gb|EEY14753.1| RNase3 domain-containing protein [Verticillium albo-atrum VaMs.102]
          Length = 1510

 Score =  243 bits (621), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 220/787 (27%), Positives = 357/787 (45%), Gaps = 136/787 (17%)

Query: 227 HYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSW-EADHNRAGKEA----NGI 281
           H       D R        PR   E+ R  ++   F   +W +++ N   + A      +
Sbjct: 71  HDEADENSDDRQHSMTPERPRKITEKKR--ADHAAFH--NWLQSNSNEIAQSAPQPVQTL 126

Query: 282 NQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI 341
           N      + ++SE ++ +  E  R YQ+++ E+AK+KN IA L TG+GKTLIA LL+R  
Sbjct: 127 NHTSTAMMVRESENRKII--ENPREYQIELFERAKRKNIIAVLPTGSGKTLIAALLLRYT 184

Query: 342 CN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQ 397
                 D +    K +A FLV KV L  QQ  V+     + +   CG+M +  W  + W 
Sbjct: 185 LEQETADRRAGKPKRIAFFLVEKVALALQQHAVLECNLEFPIDRVCGDMVRSDWIKESWM 244

Query: 398 REFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-TS 456
           + +D   V+V TA IL   L  S I+M+ INLLI DE HHA   HPY+ ++ ++Y T   
Sbjct: 245 KRWDDNMVMVCTAAILQQCLARSFIRMDQINLLIFDEAHHAKGNHPYARIIKDYYITEPD 304

Query: 457 KEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEV 516
           KE+RP +FGMTASPV+     +  D  I    LE  L S + TI                
Sbjct: 305 KERRPKIFGMTASPVD-----ALTDVKIAAAQLEGLLHSEIATI---------------- 343

Query: 517 VVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQ--FMGARDAGAKEELRQVYGVS 574
             E D A+         KQ++   +E  +   + S  +  F        +E++R     +
Sbjct: 344 --EQDSAS--------FKQIQ---KEVVEQDCKYSALEPPFTTNLHKKIQEQVRYNRNFA 390

Query: 575 ERTESDGAANLIQKLRAINYAL---GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE 631
                          +A++++L     LG WC  +  Q FLT                 E
Sbjct: 391 ---------------KALSHSLEMSSSLGSWCVDRFWQIFLT-----------------E 418

Query: 632 SYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDV 691
             L+++ +       + A     A   + E+  +E   N I++ + L             
Sbjct: 419 ETLARMAA-------QTAQDNIFADRAEREHVAIEEVRNIIKQHQFLP------------ 459

Query: 692 IIGAAVADGKVTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-- 748
            +   + D  ++ KV  L+ ++ L++    D + IIFVE+   A++L  + + LP     
Sbjct: 460 -VTKTLQD--LSSKVLCLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLS-LPGTGPL 515

Query: 749 FVKSASLIGH--NNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
           ++K A+L+G+  +NS    +++ Q  TI KFR G    L+ATSVAEEG+DI  C +VIRF
Sbjct: 516 YLKPAALVGNPSDNSPLAMSYKEQVMTITKFRRGEFNCLLATSVAEEGIDIADCKIVIRF 575

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSH 865
           DL  +V+ YIQS+GRAR   S+YI M E GN  H       R   +     ++ R   S 
Sbjct: 576 DLFNSVIQYIQSKGRARHLNSEYICMAELGNGKH------TRAKIQANYDLSLIRQFCST 629

Query: 866 LKDTSRLISVDAVPGT--------VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
           L +  +++  D              + + STGA ++   ++ ++  + S L  +  + L 
Sbjct: 630 LPEDRKIVGWDPEAALHHGERDHEFHIIPSTGAKLTWTGSLVVLSTFASSLQVNDET-LS 688

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
           P +++         +EY C++QLP  +P   + G +  +   A+ +     C KL + G 
Sbjct: 689 PSYMVSLIG-----SEYICEVQLPSRSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGF 743

Query: 978 FTDMLLP 984
            ++ L P
Sbjct: 744 ISNHLQP 750



 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 201/513 (39%), Gaps = 123/513 (23%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP++    VS  +NLL        +   + E+   +  YV L P    I  LP  +V  
Sbjct: 1001 KQPVVEAELVSLRRNLL--------DGFADSEQAGSRICYVILQP--LQISTLPVKVVAM 1050

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------QETF-------- 1400
            A   P+I+ R+ES ++A+     +N  V     LEA+T  S       QE          
Sbjct: 1051 AYNFPAIIHRIESNMIALDACRMLNLQVRPDLALEAMTKDSSNSDEQDQEKIDFQAGMGN 1110

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   +  LF + P  +E +    R  ++ N  L+  AL K LQ YI+
Sbjct: 1111 NYERLEFLGDCFLKMATTIALFTRIPDSNEFEYHVERMLLICNQNLFNVALKKNLQEYIR 1170

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            + +F    W   G+                 ++K+                      G+ 
Sbjct: 1171 SKQFDRRSWYPQGL-----------------KQKA----------------------GKA 1191

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
            +G  +S+  L+ K++ADV EA+IG  Y+                                
Sbjct: 1192 QGAQNSHS-LADKSIADVCEAMIGASYLS------------------------------- 1219

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS--GVSCYQRLEFVGDAVLD 1638
                        +A E    + FK   LL  A  H S P     V  YQRLEF+GDA+LD
Sbjct: 1220 ------------YADEGNFDMAFKSPALLRSAFKHPSYPRQFESVPNYQRLEFLGDALLD 1267

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
             +    LF  + +  P  LT+ + A V+N     ++V+   +  + H S  +  QI+D+V
Sbjct: 1268 MVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVLHFSGVMANQIKDYV 1327

Query: 1699 KEVLEELLKPGF---------NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
              +     +              + L     PK L D+VE+  GAIF+DSG + S V   
Sbjct: 1328 DALTHARQEAEAAAQISGVISQDYWLNVQHPPKFLSDVVEAYIGAIFVDSGYNYSQVQAF 1387

Query: 1750 FQPLLDPMVTPETL-----PMHPVRELQERCQQ 1777
            F+  + P      L        PV  L    QQ
Sbjct: 1388 FEKHIRPFFADMALYDSFASSQPVTTLARMMQQ 1420


>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 1691

 Score =  243 bits (621), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 192/695 (27%), Positives = 331/695 (47%), Gaps = 83/695 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLVPKV 361
           R YQL++LE  KK NTI +L TG+GKT IA +L++S+ + L +   Q KK    F+V  V
Sbjct: 14  RKYQLELLEDCKKANTILYLPTGSGKTYIATMLVKSMGDCLTKPIGQGKKW-TFFIVQSV 72

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           PLV QQA  +R    + +G + G+M  DFW  Q+W    +   +LVMTAQI LN LRH  
Sbjct: 73  PLVSQQAGNLRRHLPWNIGTFSGDMNVDFWSQQQWNEILEKCHILVMTAQIYLNNLRHGY 132

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLKGVSSQV 480
           + ++  NLLI DECHHAV  HP+  +M   + T  K ++RP + G+TA+ +N    ++  
Sbjct: 133 MHIKDANLLIFDECHHAVALHPFKQIMQVLHDTDLKTDERPRILGLTATLIN----ANTK 188

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           +   ++  L+   ++ + T  D   ++     P E +  YD+    + L +++K +   V
Sbjct: 189 NVKEELTKLQITFNATIKTRYD-DNIQIFSARPKEFIRLYDE----YILDDEIKAI---V 240

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           +    ++    K Q    +    KE     Y   ++  S   AN    + A    L + G
Sbjct: 241 KRLNTNTCNLRKIQ-APMKIEPIKENNETYYLEYQKQASKNFANYFLDIEA---NLVDGG 296

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDS 660
            + AY V   F+  ++   +              +K ++++   L E  +++K   + D 
Sbjct: 297 AYIAYLVTWHFMVEIEKKRKICTD----------AKRLTIMSLVLSELTITRK--MLYDY 344

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTE 720
            N                        +H+ +  G +      +PK++ LI+IL   + T+
Sbjct: 345 MN------------------------KHLIIHKGHSTKLHNTSPKLKKLIEILSSIKLTD 380

Query: 721 DFRAIIFVERVVAALVLPKVFAELPS--------LSFVKSASLIGHNNSQEM--RTFQMQ 770
               ++FV+R   A +L     +             F+  A  I   + +EM  +  Q  
Sbjct: 381 --TCLVFVDRRTTAKILYHYIKDYIEEFNQVNIVCEFIVGARGIFSPDCKEMVYKKQQNN 438

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           + I KF D  + +L+ + V EEG+DI+ CN VIR+D  K   +YIQS+GRAR   S +IL
Sbjct: 439 DIIKKFNDNVINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYIQSKGRARSTDSKFIL 498

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
           M+        T     +  EE ++   +   D+    +  ++         V+  E+  A
Sbjct: 499 MVPNQLKFQKTQTEYNKMEEEIVK--LLVDNDIDDENNDEKMTE-------VFHTETDRA 549

Query: 891 VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-L 949
           +++   A+ +I+ YC  LP DR++ L PE+ M ++           KL+LP N+  +  +
Sbjct: 550 LLTHEIAISIINRYCYSLPQDRFTDLSPEWYMAQNHNMSK----KYKLKLPINSVIKTPI 605

Query: 950 EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +G  C++ + A+++    AC  L+++GA  + L+P
Sbjct: 606 DGLFCTNKKNAKKSAAFNACIALYKIGALDENLMP 640



 Score =  167 bits (422), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 207/436 (47%), Gaps = 52/436 (11%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S IL+ +T     + F YER E  GD++LK+ VS  LF  +P  +EG LT ++ ++V N 
Sbjct: 1196 SDILKVITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKLVGNR 1255

Query: 1445 VLYQYALSKGLQSYIQADRFAPSR-WAAP--GVLPVFDEDTKDGD-SSLFDQEKSVAEDK 1500
             L     +  L SY+  + F P+  W  P  GV     E  ++G+  S    + ++  D 
Sbjct: 1256 NLLYVGRNLNLGSYLVVNVFDPNMDWIPPCFGVPIKLKEIIEEGNFQSDVLHQITIPRDN 1315

Query: 1501 LGT----DKNYNEYE---------------DDDMEDGELE-GDSSSYRVL-----SSKTL 1535
              T    D+ + E E               D D EDG  + G S S   L     S K +
Sbjct: 1316 QTTGILSDETWIEIETELLKFKRLSDMPISDSDEEDGIPQIGHSQSDLFLHKQSVSDKMV 1375

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD VE+LIG Y  + G +    +++ +GI     P++     +P  + + +   +DF   
Sbjct: 1376 ADCVESLIGTYVYKRGVEVGFKVLQGLGII----PKQFIDTFKPKPI-DDLYDGLDFSKI 1430

Query: 1593 ----HALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
                  LE  +   FK + LL +A+TH +       CYQRLEF+GDA+LD LIT ++   
Sbjct: 1431 LPGYELLERRIGYSFKHKHLLAQALTHPTYQFGFSECYQRLEFLGDAILDFLITTYIIEH 1490

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
              +  PG +TD+R++ VNN  FA ++ +  LH  +   S  +   I  F +   +   K 
Sbjct: 1491 CYHKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKI 1550

Query: 1709 GFNSFGL---GDCKA------PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            G     L    DC A      PKVLGD+ ES+  AI+LD  RD + VW +    L+  + 
Sbjct: 1551 GQEVLYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLDCNRDLNFVWAICYRFLEKEIK 1610

Query: 1760 P--ETLPMHPVRELQE 1773
               + +P +P+R L E
Sbjct: 1611 EFCDNVPKNPIRILHE 1626



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 17/135 (12%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            +R+ V  + ++MT ESSFP  E       Y +YA Y+  KY +++  K QP+I+ + +  
Sbjct: 866  QRYIVTDVYWDMTPESSFPTSE-------YDTYATYFSDKYSIQVAHKNQPMIKVKSLGV 918

Query: 1307 CK-NLLSPRFEHSE-EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
             K N L PR    + ++  E  EI        L PE C  H  P      A  LP+++ R
Sbjct: 919  SKINYLVPRISTGKIDKRSEYIEI--------LVPEFCTWHKFPSVYWLKALMLPTLLYR 970

Query: 1365 VESMLLAIQLKDKIN 1379
            ++ +LLA  L  KIN
Sbjct: 971  LDKLLLAEDLLVKIN 985


>gi|376336574|gb|AFB32892.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
 gi|376336576|gb|AFB32893.1| hypothetical protein 0_6448_02, partial [Pinus cembra]
          Length = 150

 Score =  243 bits (621), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 120/150 (80%), Positives = 129/150 (86%), Gaps = 3/150 (2%)

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
            NSFGLGD KAPKVLGDIVESIAGAIFLD   DT+ VW+VFQPLL PMVTPETLPMHPVRE
Sbjct: 1    NSFGLGDFKAPKVLGDIVESIAGAIFLDKVLDTTKVWEVFQPLLQPMVTPETLPMHPVRE 60

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            LQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+G AQNPQKKMAQKLAARNAL +LKEK
Sbjct: 61   LQERCQQQAEGLEYKASRTGNMATVEVFVDGVQIGFAQNPQKKMAQKLAARNALVILKEK 120

Query: 1831 ETAEAKEKGDENGK---KRKNGTQTFTRQT 1857
            E  E K  G  NG     +KNG QTFTRQT
Sbjct: 121  EAEETKADGVNNGDGAAGKKNGNQTFTRQT 150


>gi|376336568|gb|AFB32889.1| hypothetical protein 0_6448_02, partial [Larix decidua]
 gi|376336570|gb|AFB32890.1| hypothetical protein 0_6448_02, partial [Larix decidua]
 gi|376336572|gb|AFB32891.1| hypothetical protein 0_6448_02, partial [Larix decidua]
          Length = 150

 Score =  243 bits (621), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 120/150 (80%), Positives = 129/150 (86%), Gaps = 3/150 (2%)

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
            NSFGLGD KAPKVLGDIVESIAGAIFLD   DT+ VW+VFQPLL PMVTPETLPMHPVRE
Sbjct: 1    NSFGLGDFKAPKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRE 60

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            LQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+G AQNPQKKMAQKLAARNAL +LKEK
Sbjct: 61   LQERCQQQAEGLEYKASRTGNMATVEVFVDGVQIGFAQNPQKKMAQKLAARNALVILKEK 120

Query: 1831 ETAEAKEKGDENG---KKRKNGTQTFTRQT 1857
            E  E K  G  NG     +KNG QTFTRQT
Sbjct: 121  EAEETKADGVNNGDGATGKKNGNQTFTRQT 150


>gi|361066575|gb|AEW07599.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|376336578|gb|AFB32894.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
 gi|376336580|gb|AFB32895.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
 gi|376336582|gb|AFB32896.1| hypothetical protein 0_6448_02, partial [Pinus mugo]
 gi|383164825|gb|AFG65201.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164826|gb|AFG65202.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164827|gb|AFG65203.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164828|gb|AFG65204.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164830|gb|AFG65205.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164831|gb|AFG65206.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164832|gb|AFG65207.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164833|gb|AFG65208.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164834|gb|AFG65209.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164835|gb|AFG65210.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164836|gb|AFG65211.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164837|gb|AFG65212.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164838|gb|AFG65213.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164839|gb|AFG65214.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164840|gb|AFG65215.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
 gi|383164841|gb|AFG65216.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
          Length = 150

 Score =  243 bits (620), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 120/150 (80%), Positives = 129/150 (86%), Gaps = 3/150 (2%)

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
            NSFGLGD KAPKVLGDIVESIAGAIFLD   DT+ VW+VFQPLL PMVTPETLPMHPVRE
Sbjct: 1    NSFGLGDFKAPKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRE 60

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            LQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+G AQNPQKKMAQKLAARNAL +LKEK
Sbjct: 61   LQERCQQQAEGLEYKASRTGNMATVEVFVDGVQIGFAQNPQKKMAQKLAARNALVILKEK 120

Query: 1831 ETAEAKEKGDENGK---KRKNGTQTFTRQT 1857
            E  E K  G  NG     +KNG QTFTRQT
Sbjct: 121  EAEETKADGMNNGDGAAGKKNGNQTFTRQT 150


>gi|361066573|gb|AEW07598.1| Pinus taeda anonymous locus 0_6448_02 genomic sequence
          Length = 150

 Score =  243 bits (620), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 120/150 (80%), Positives = 129/150 (86%), Gaps = 3/150 (2%)

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
            NSFGLGD KAPKVLGDIVESIAGAIFLD   DT+ VW+VFQPLL PMVTPETLPMHPVRE
Sbjct: 1    NSFGLGDFKAPKVLGDIVESIAGAIFLDKVLDTAKVWEVFQPLLQPMVTPETLPMHPVRE 60

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            LQERCQQQAEGLEYKASR+GN+ATVEV++DGVQ+G AQNPQKKMAQKLAARNAL +LKEK
Sbjct: 61   LQERCQQQAEGLEYKASRTGNMATVEVFVDGVQIGFAQNPQKKMAQKLAARNALVILKEK 120

Query: 1831 ETAEAKEKGDENGK---KRKNGTQTFTRQT 1857
            E  E K  G  NG     +KNG QTFTRQT
Sbjct: 121  EAEETKADGVNNGDGAAGKKNGNQTFTRQT 150


>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 1487

 Score =  242 bits (618), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 209/698 (29%), Positives = 316/698 (45%), Gaps = 125/698 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQL++ E+AKK N IA L+TG+GKTLIAVLL++ I      D   +    ++ FLV  
Sbjct: 100 REYQLELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEKPHRVSFFLVDS 159

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQA V++      V  +CG M  D W+ + W+R      V+V TA++L   L H+
Sbjct: 160 VTLVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLHA 219

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +KME INLLI DE H+A K HPY+ ++ +FY      KRP +FGMTASPV+ K     V
Sbjct: 220 FVKMENINLLIFDEAHNAKKDHPYARIVKDFYLKDGNAKRPKIFGMTASPVDAK-----V 274

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLKQMEV 538
           D      NLE+ L+S + T  +   L + V  P+E V  YD+    +   L+++L     
Sbjct: 275 DVVKAARNLETLLNSQIATASNLSLLRQSVARPNEEVWSYDRLDQPFETRLYKEL----- 329

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
                      RS++        G    L +++  S +  S+                  
Sbjct: 330 -----------RSRF--------GDLRALEKLFTFSLKASSN------------------ 352

Query: 599 LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD---- 654
           LG WCA  V    LT                 E  L K         +EG  ++      
Sbjct: 353 LGAWCADWVWSYALT-----------------EESLPK---------LEGRAARTAMGNL 386

Query: 655 --AKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             AK+V       E     I E  E++ SH        D  I   +   KV      L+K
Sbjct: 387 PIAKIVRP-----EAEIQRIREASEIIRSHKFG-----DPAIRPELLSPKVRRLHHELLK 436

Query: 712 ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG--HNNSQEMRTFQM 769
              ++  T   + I+F E+   A +L  +F+++ +   ++   LIG   + S  M     
Sbjct: 437 YFERHTDT---KCIVFTEQRHTARILCDLFSKIGT-KHLRPGVLIGVRSDASGGMNISFR 492

Query: 770 QETIA--KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           Q+ +A   FR G V  L ATSVAEEGLDI  CN+++RFDLA T+  YIQSRGRAR   S 
Sbjct: 493 QQVLAVVSFRKGEVNCLFATSVAEEGLDIPDCNLIVRFDLASTLTQYIQSRGRARHMNST 552

Query: 828 YILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSRLISVDAVPGTVYQV 885
             L+I                S+E +++  I   +  + +  D   L   D      Y V
Sbjct: 553 TCLII-------------TCKSQEIMKRFCISLPKDRILNSNDVDALYEGDR-NRKCYTV 598

Query: 886 ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
           ++TGA ++ NS++ ++  + + L  ++ +     +   R  K      + C++ LP  +P
Sbjct: 599 QTTGAKLTYNSSLVVLAHFANSLQYEKETSTVVSY-YHRFTK----NAFVCEVVLPEKSP 653

Query: 946 FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
              + G   S   +A+Q+     C  L + G   D  +
Sbjct: 654 IRGIVGKPASKKLIAKQSAAFETCLLLRKHGLLDDHFV 691



 Score =  167 bits (424), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 168/576 (29%), Positives = 256/576 (44%), Gaps = 93/576 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+I+   +   +NLL  R    + +EG+        YY+ L P    I  +P S+   A
Sbjct: 937  QPVIKAEIIQLRRNLLDKRTNKEKIKEGD--------YYICLEP--LTISAIPASVAAFA 986

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+ES L+A++   +++ P+     LEALT  S        Q+          
Sbjct: 987  FAFPAIISRIESYLIALEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMGKN 1046

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  +V N  L++ A+   L  +I++
Sbjct: 1047 YERLEFLGDCFLKMATSISLFAMNPDNDEYDFHVKRMCLVCNQNLFKTAVRFKLYEFIRS 1106

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                    ++ + K                 G+ +
Sbjct: 1107 QSFSRRGWYPEGL--------------------TLLQGK-----------------GQSK 1129

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPS 1577
            G + +   L+ KT+ADV EALIG   +   K+    + +K +   V SD   V      S
Sbjct: 1130 GATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNWEQYS 1189

Query: 1578 RPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPSSG--VSCYQRL 1629
            R   +P+     VD   L+ A ++K      FK   LL  A TH S PS+   V CYQRL
Sbjct: 1190 RLYSLPKYQTAVVDAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVPCYQRL 1249

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDA+LD    +H++  + +  P  LT+ + A V+N+    VAV+  LH HL H S++
Sbjct: 1250 EFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTS 1309

Query: 1690 LDRQIRDFVKEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            L  QI ++V+E+    L+ G   +++ L     PK L D+VE+  GAIF+DS     VV 
Sbjct: 1310 LQSQITNYVEEIEAAELESGDSPDAWTLTS-DPPKCLPDMVEAYIGAIFIDSNFSFEVVE 1368

Query: 1748 QVFQPLL-----DPMVTPETLPMHPVRELQER----------CQQQAEGLEYKASRSGNL 1792
            + FQ  L     D  +       HP   L  R          C +  E        +  L
Sbjct: 1369 EFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRLAIDFGCSNYCLKAGEVPYVDGPGTRVL 1428

Query: 1793 ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            A V V+ + V  GVA +   + A+  A+  AL+ L+
Sbjct: 1429 AAVIVHDEVVTEGVASS--SRYAKLKASEAALSKLE 1462


>gi|47210542|emb|CAF93934.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1479

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 219/806 (27%), Positives = 354/806 (43%), Gaps = 126/806 (15%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ--RQNKKMLAVFLVPKVP 362
            R YQ+++LE A + NTI  L +G+GKT IAVLL + + + ++          VFLV    
Sbjct: 36   RKYQVELLEAALEHNTIVCLNSGSGKTFIAVLLTKELSHQIRGPYSGTAKRTVFLVNTAA 95

Query: 363  LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQRE-------------------FDTK 403
             V +QA  +R  +   VG Y        W  Q W RE                      K
Sbjct: 96   SVVEQAAAVRTHSDLQVGEYSDSERTTTWTDQHWSREIAENQHSDGSSFSDRVSLRLSVK 155

Query: 404  QVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSV 463
            QVLVMT  I L IL   I+++  INL++ D+CH A+  HPY  +M  F    S    P +
Sbjct: 156  QVLVMTCHIFLYILTRKILRLSKINLVVFDDCHLAIADHPYCEIMKYFEGIASS---PRI 212

Query: 464  FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---Y 520
             G+TAS +N  G     D   KI NLE  L S   T  D   L+++   P EVV++   Y
Sbjct: 213  LGLTASILN--GKCDPSDLEEKIQNLERTLKSNAETATDLVVLDRYASQPREVVLDCGPY 270

Query: 521  DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD 580
               + L S      +++  ++EA +         F+   +     E      +S++   D
Sbjct: 271  LDRSGLCS------RLQAELDEALR---------FLNDCNISVAREDHNPTFISKQVLGD 315

Query: 581  GAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSK 636
              A            L  LG WCA K A   +  LQ    +++    +  + F ++ L K
Sbjct: 316  CLA-----------VLQVLGPWCADKAAGIMVRELQKYIKHEQEELSRKFLLFTDTILRK 364

Query: 637  VVSLLQCELVEGAVSKK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIG 694
            V +L +      ++  K    KV+       E    E ++ E ++ +     ++      
Sbjct: 365  VHALCEEHFSPTSLDLKFVTPKVLRLLEILREYKPFERQQFESVEWYNNRNQDNYVSWSD 424

Query: 695  AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFV 750
            +   D     + +   +       T     IIFVER   A+VL ++  E     P L+++
Sbjct: 425  SEDEDEDEDAEAKERPEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGEQDPELAYI 484

Query: 751  KSASLIGHN-------NSQEMRTFQMQE-------------------------------- 771
             S  + GH+       N Q    F+ QE                                
Sbjct: 485  SSNFITGHSIGKYQLRNKQMEVEFRKQEEVRRRSADQGRPGPPLTPVPPTSPTWSGRVVE 544

Query: 772  -----TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
                  + KFR     LL+ATS+ EEG+DI +CN+V+RFDL     +Y+QS+GRAR P S
Sbjct: 545  SCFPQVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVS 604

Query: 827  DYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQV 885
            +YI++ +     +    L   +  E+ LR +  +  ++S  +          +P  V + 
Sbjct: 605  NYIMLADSERTKAFEDDLTTYKAIEKILRNKCSKSVEVSEFEVEQVFDDDCIIPPYVLRS 664

Query: 886  ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
            E  G  V++N+A+G I+ YC++LPSD ++ L P+   +  E   G   +  +L LP N+P
Sbjct: 665  EDGGPRVTINTAIGHINRYCARLPSDPFTHLAPK--CKTVELQNG--HFQSRLYLPINSP 720

Query: 946  FE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPL 1004
                ++GP+ + +RLA++AV L  C+KLH++G   D L+P    G++  K ++  +    
Sbjct: 721  LRVPVKGPIMNCVRLAEKAVALLCCEKLHKIGELDDHLMP---VGKETVKYEEELDLHDE 777

Query: 1005 --------PGTARHREFYPEGVADIL 1022
                    PG+ + R+ YP+ + + L
Sbjct: 778  EETSVPGRPGSTKRRQCYPKAIPECL 803



 Score = 80.9 bits (198), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 1017 RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 1069

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 1070 LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 1126

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 1127 LPSILYRLHCLLTAEELR 1144



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1352 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1411

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1412 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1450



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 1583 PESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT 1642
            P S LRSV  H  +   +    + GL+++A+T  S  S G +  +RLE +GD+ L H IT
Sbjct: 1326 PCSDLRSVPKHRSKAGDRSLGPNPGLILQALT-LSNASDGFN-LERLEMLGDSFLKHAIT 1383

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
             +LF +Y +   GRL+ +R+  V+N N  R+  K  L
Sbjct: 1384 TYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGL 1420


>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
          Length = 2473

 Score =  241 bits (615), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 176/514 (34%), Positives = 259/514 (50%), Gaps = 62/514 (12%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D +N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ FL+  YPQ+HEG+L+
Sbjct: 1953 DLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVL-------PVFDEDTKDGD 1486
             +R + VSNL LY+    KGL   + A +F P   W  PG          + D     G 
Sbjct: 2013 YLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGH 2072

Query: 1487 SSLFDQ-----------EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---SYRVLSS 1532
             ++ D             + V E      ++ +E    ++   +   D      Y +L+ 
Sbjct: 2073 WNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDPPIFIPYNLLTQ 2132

Query: 1533 -----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPE--------EVG 1574
                 K++AD VEALIG Y    G   A   M W+GI+V     ES PE         + 
Sbjct: 2133 HSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEACELITYGHLE 2192

Query: 1575 CPSRPA--CVPESVLRSVD-----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CY 1626
             P  P   C      + +D     +   E+ +   F+DR  L++A THAS   + ++ CY
Sbjct: 2193 SPQSPPYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQASTHASYYKNRLTDCY 2252

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AVK+  H + RH 
Sbjct: 2253 QRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHF 2312

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGL--------GDCKAPKVLGDIVESIAGAIFLD 1738
            S   DR IRDFVK   E   K     + +         D + PK LGD+ ES+AGAIFLD
Sbjct: 2313 SPGPDRVIRDFVKMQEENGHKINEEYYFMEEDEREAAEDIEVPKALGDVFESVAGAIFLD 2372

Query: 1739 SGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATV 1795
            SG     VW V+  ++ P +      +P  P+REL E   + A+  + +    G +  +V
Sbjct: 2373 SGSSLDAVWSVYYTMMCPEIERFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSV 2432

Query: 1796 EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            E++  G   GV +N   ++A+  AA+ AL  LK+
Sbjct: 2433 EIFGKGSFSGVGRN--YRIAKSTAAKRALRHLKK 2464



 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 218/496 (43%), Gaps = 92/496 (18%)

Query: 710  IKILLKYQHTEDFRAI---IFVERVVAALVLPKVFAEL-----------PSLSFVKSASL 755
            +K  +K  + ED  ++   IFV     A ++ ++  EL           P  +     S+
Sbjct: 913  VKEKVKVHNPEDPDSVCGLIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESV 972

Query: 756  IGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                 + E    + +E + +FR     +LV+T V EEG+D+ QCN+V+RFD      +Y+
Sbjct: 973  KEDPRAAEAEHKKQEEVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYV 1032

Query: 816  QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD----TSR 871
             S GRAR   + Y  +I +      +FL +           A ++  +SH       T R
Sbjct: 1033 HSCGRARGHDTFYFHLITKNQ--EISFLHDMAT------YSAFQQVLVSHCGSVEVGTDR 1084

Query: 872  -LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
             ++S +A       +    A V++ SA+GL++ YC++LPSD ++ L   + +E  ++   
Sbjct: 1085 EVLSSEANAAHAPYITPAEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIKEAEA 1144

Query: 931  PTE-YSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
             T  Y CK+ LP N+P +  +EGP    + LA+ A  L  C++LH+MG   D L P    
Sbjct: 1145 LTPVYKCKIMLPINSPLKGTIEGPWQKKVSLAKMAAALECCRRLHQMGELDDQLQP---V 1201

Query: 989  GEQQEKV----------DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSK 1038
            G++  K+          DQ  EG P PGT + R++Y + VA  L GE    G D      
Sbjct: 1202 GKESMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLD------ 1255

Query: 1039 LFHLFMYTVKCV------------------------NNGISKDPFLTQVSDFAVLFSS-- 1072
               LF+Y +  V                        + GI     ++QVS F V   S  
Sbjct: 1256 ---LFVYKLDMVLTCPIPDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGE 1312

Query: 1073 ------ELDA-------ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDK 1119
                  E++        +L++L+ FH    + VL   +E Y   +DP  A     +V   
Sbjct: 1313 VVVHVQEIERKVNVTQDQLSALQYFHKFTFTHVL--RLEKYPIKFDPTNARTAFYIVPLN 1370

Query: 1120 SVDPMNELDWDLVEKI 1135
              +    +DW+ V++I
Sbjct: 1371 KFNGSEGIDWEFVKEI 1386



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S FP          + ++  YY  KYG+++    QPL+     S   
Sbjct: 1430 FYVAEICTHLNPQSDFPDAG-------FETFEKYYLTKYGLQICNLAQPLLDVDHTSGRL 1482

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR  +         SEE +    E L +     L PELC IHP P SL R A  LP
Sbjct: 1483 NLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQ--ILVPELCTIHPFPASLWRKAVCLP 1540

Query: 1360 SIMRRVESMLLAIQLK 1375
            +I+ R+ ++LLA QL+
Sbjct: 1541 TILYRINALLLADQLR 1556



 Score = 49.7 bits (117), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 1374 LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             ++KI Y     S +L+A T AS  +   T CY+R E LGDA L ++++R L+    Q  
Sbjct: 2220 FEEKIGYTFRDRSYLLQASTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHS 2279

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR 1468
             G LT +R  +V+N +    A+      Y +     P R
Sbjct: 2280 PGALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGPDR 2318



 Score = 44.3 bits (103), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNKKMLAVFLVPKV 361
           R YQ+++++   K NT++ L + + +T +  ++ R + +     ++  K    +      
Sbjct: 18  REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           P + +  E I++ T   V  Y      + W   RW + F   QV++MT  +L   L   +
Sbjct: 78  PGLVRAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLETGL 137

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           ++++ +NLL++ + H      P   V++         +   + GMT SPV L    S   
Sbjct: 138 LQLDMLNLLVITDAHRVATFPPLIKVLNLC-------RGCRILGMT-SPV-LSHACSPPQ 188

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
               + +L+     VV T  +   + ++V  P E +V       +    +  ++ EV +E
Sbjct: 189 LESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIV-------MCRDPDPDERSEVELE 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY----ALG 597
                  RR   + +   D   + +L +VYG   +   D   +  ++ R I       L 
Sbjct: 242 ------VRRLVGEALSFLD-NHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLN 294

Query: 598 ELGQWCAYKVA 608
            LG WCA + A
Sbjct: 295 NLGLWCADRAA 305



 Score = 42.0 bits (97), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
            EV C S  + + E +  S DF    D L        ++++A+T  S  + GV+  +RLE 
Sbjct: 1931 EVQCSSWNS-ICEEMSFSFDFQP--DLLNHPGPSPSVILQALT-MSNANDGVN-LERLET 1985

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            +GD+ L + IT  L+ +Y     G+L+ LR+  V+N N  R+  +  L
Sbjct: 1986 IGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGL 2033


>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
          Length = 2473

 Score =  240 bits (613), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 176/514 (34%), Positives = 259/514 (50%), Gaps = 62/514 (12%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D +N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ FL+  YPQ+HEG+L+
Sbjct: 1953 DLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVL-------PVFDEDTKDGD 1486
             +R + VSNL LY+    KGL   + A +F P   W  PG          + D     G 
Sbjct: 2013 YLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGH 2072

Query: 1487 SSLFDQ-----------EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---SYRVLSS 1532
             ++ D             + V E      ++ +E    ++   +   D      Y +L+ 
Sbjct: 2073 WNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELTATQNPHDLPIFIPYNLLTQ 2132

Query: 1533 -----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPE--------EVG 1574
                 K++AD VEALIG Y    G   A   M W+GI+V     ES PE         + 
Sbjct: 2133 HSIPDKSIADYVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELITYGHLE 2192

Query: 1575 CPSRPA--CVPESVLRSVD-----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CY 1626
             P  P   C      + +D     +   E+ +   F+DR  L++A THAS   + ++ CY
Sbjct: 2193 SPQSPLYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTGCY 2252

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AVK+  H + RH 
Sbjct: 2253 QRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHF 2312

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGL--------GDCKAPKVLGDIVESIAGAIFLD 1738
            S  LDR IRDFVK   E   K     + +         D + PK LGD+ ES+AGAIFLD
Sbjct: 2313 SPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLD 2372

Query: 1739 SGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATV 1795
            SG     VW V+  ++   +      +P  P+REL E   + A+  + +    G +  +V
Sbjct: 2373 SGSSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSV 2432

Query: 1796 EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            E++  G   GV +N   ++A+  AA+ AL  LK+
Sbjct: 2433 EIFGKGSFSGVGRN--YRIAKSTAAKRALRHLKK 2464



 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 89/479 (18%)

Query: 724  AIIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQET 772
             +IFV     A ++ ++  EL           P  +     S+     + E    + +E 
Sbjct: 930  GLIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEV 989

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR     +LV+T V EEG+D+ QCN+V+RFD      +Y+ S GRAR   + Y  +I
Sbjct: 990  LRRFRHHECKILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVLSCGRARGHDTFYFHLI 1049

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD----TSR-LISVDAVPGTVYQVES 887
             +      +FL +           A ++  +SH       T R ++S +A       +  
Sbjct: 1050 TKNQ--EISFLHDMAT------YSAFQQVLVSHCGSVEVGTDREVLSSEANAAHAPYLTP 1101

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSCKLQLPCNAPF 946
              A V++ SA+GL++ YC++LPSD ++ L   + + E  E      +Y CK+ LP N+P 
Sbjct: 1102 AEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINSPL 1161

Query: 947  E-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV---------- 995
            +  +EGP  S + LA+ A  L  C++LH+MG   D L P    G++  K+          
Sbjct: 1162 KGTIEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQP---VGKESMKLDDHLCAPPAD 1218

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV----- 1050
            DQ  EG P PGT + R++Y + VA  L GE    G D         LF+Y +  V     
Sbjct: 1219 DQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLD---------LFVYKLDMVLTCPI 1269

Query: 1051 -------------------NNGISKDPFLTQVSDFAVLFSS--------ELDA------- 1076
                               + GI     ++QVS F V   S        E++        
Sbjct: 1270 PDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKVNVTQD 1329

Query: 1077 ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            +L++L+ FH    + VL   +E Y   +DP  A     +V     +    +DW+ V++I
Sbjct: 1330 QLSALQYFHKFTFTHVL--RLEKYPIKFDPTNARTAFYIVPLNKFNGSEGIDWEFVKEI 1386



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S FP          + ++  YY  KYG+++    QPL+     S   
Sbjct: 1430 FYVAEICTHLNPQSDFPDAG-------FETFEKYYLTKYGLQICNLAQPLLDVDHTSGRL 1482

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR  +         SEE +    E L +     L PELC IHP P SL R A  LP
Sbjct: 1483 NLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQ--ILVPELCTIHPFPASLWRKAVCLP 1540

Query: 1360 SIMRRVESMLLAIQLK 1375
            +I+ R+ ++LLA QL+
Sbjct: 1541 TILYRINALLLADQLR 1556



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 1374 LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             ++KI Y     S +L+A T AS  +   T CY+R E LGDA L ++++R L+    Q  
Sbjct: 2220 FEEKIGYTFRDRSYLLQAFTHASYYKNRLTGCYQRLEFLGDAVLDYLITRHLYEDKRQHS 2279

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
             G LT +R  +V+N +    A+      Y +   F+P
Sbjct: 2280 PGALTDLRSALVNNTIFASLAVKYDYHKYFR--HFSP 2314



 Score = 44.7 bits (104), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNKKMLAVFLVPKV 361
           R YQ+++++   K NT++ L + + +T +  ++ R + +     ++  K    +      
Sbjct: 18  REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           P + +  E I++ T   V  Y      + W   RW + F   QV++MT  +L   L   +
Sbjct: 78  PGLVRAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLETGL 137

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           ++++ +NLL++ + H      P   V++         +   + GMT SPV L    S   
Sbjct: 138 LQLDMLNLLVITDAHRVATFPPLIKVLNLC-------RGCRILGMT-SPV-LSHACSPPQ 188

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
               + +L+     VV T  +   + ++V  P E +V       +    +  ++ EV +E
Sbjct: 189 LESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIV-------MCRDPDPDERSEVELE 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY----ALG 597
                  RR   + +   D   + +L +VYG   +   D   +  ++ R I       L 
Sbjct: 242 ------VRRLVGEALSFLD-NHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLN 294

Query: 598 ELGQWCAYKVA 608
            LG WCA + A
Sbjct: 295 NLGLWCADRAA 305


>gi|413933740|gb|AFW68291.1| hypothetical protein ZEAMMB73_565304 [Zea mays]
          Length = 462

 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 228/444 (51%), Gaps = 56/444 (12%)

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETF 1400
            P+  + +     +PSIM R++ +LL+ +LK ++      + + A KILEALT   CQE F
Sbjct: 3    PVSANTLFSFSFVPSIMYRIQCLLLSAKLKIQLGPRMQQFNITAMKILEALTTKECQEKF 62

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
              E  E LGD+++K+V  + LF KY  + E  LT MR++ VSN  L Q A    +  YI+
Sbjct: 63   SMESLETLGDSFIKYVTGQNLFNKYKHR-EDMLTSMREEKVSNPALCQLACKSEIVGYIR 121

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
             + F P +W  PG    F  D++  +   F                 N Y    +     
Sbjct: 122  GELFNPQKWTIPG----FGYDSRGNNKVFFRATN-------------NMYSLKKIS---- 160

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
                     + SK +AD VEAL G Y    G+ AA H +K +G+ VE   +      R  
Sbjct: 161  ---------IKSKRIADTVEALTGAYLSTCGELAAVHFIKALGMDVELHSKMQ--VERTI 209

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
                  L  +D  +L+  LK  F D  LLVEA+TH+S   +G++ C +RLEF+GDAVLD+
Sbjct: 210  TTKSEEL--IDAESLQTMLKYVFYDTSLLVEALTHSSYNITGITACNERLEFLGDAVLDY 267

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            ++T + +  Y N  P  LT+LR A+VNN  +A  AVK  LH H+ H SS          K
Sbjct: 268  ILTYYFYRKYPNCTPALLTNLRKASVNNCCYAHAAVKAGLHKHILHSSS----------K 317

Query: 1700 EVLEELLKPGFNSFGL-----GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            +++ +L   G +  G           P+ L D+ E+IAGAI++DSG D  VVW   + LL
Sbjct: 318  QMVNDLENSGRSFSGPSHGWEAGISLPEDLADLFEAIAGAIYVDSGNDKEVVWSAIRRLL 377

Query: 1755 DPMVTPETLPMHPVRELQERCQQQ 1778
            +P+ TP T+   PV EL+E C+ +
Sbjct: 378  EPLATPGTMEPDPVSELKELCEHK 401


>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
          Length = 2473

 Score =  240 bits (612), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 176/514 (34%), Positives = 259/514 (50%), Gaps = 62/514 (12%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D +N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ FL+  YPQ+HEG+L+
Sbjct: 1953 DLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2012

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVL-------PVFDEDTKDGD 1486
             +R + VSNL LY+    KGL   + A +F P   W  PG          + D     G 
Sbjct: 2013 YLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGH 2072

Query: 1487 SSLFDQ-----------EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---SYRVLSS 1532
             ++ D             + V E      ++ +E    ++   +   D      Y +L+ 
Sbjct: 2073 WNMADLPGLHDLASDEIRRLVQERSEQIKRSKSEQATSELMATQNPHDLPIFIPYNLLTQ 2132

Query: 1533 -----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPE--------EVG 1574
                 K++AD VEALIG Y    G   A   M W+GI+V     ES PE         + 
Sbjct: 2133 HSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELITYGHLE 2192

Query: 1575 CPSRPA--CVPESVLRSVD-----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CY 1626
             P  P   C      + +D     +   E+ +   F+DR  L++A THAS   + ++ CY
Sbjct: 2193 SPQSPLYHCPLTDTRKELDLLLSGYQVFEEKIGYTFRDRSYLLQAFTHASYYKNRLTDCY 2252

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AVK+  H + RH 
Sbjct: 2253 QRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHF 2312

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGL--------GDCKAPKVLGDIVESIAGAIFLD 1738
            S  LDR IRDFVK   E   K     + +         D + PK LGD+ ES+AGAIFLD
Sbjct: 2313 SPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLD 2372

Query: 1739 SGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATV 1795
            SG     VW V+  ++   +      +P  P+REL E   + A+  + +    G +  +V
Sbjct: 2373 SGSSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSV 2432

Query: 1796 EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            E++  G   GV +N   ++A+  AA+ AL  LK+
Sbjct: 2433 EIFGKGSFSGVGRN--YRIAKSTAAKRALRHLKK 2464



 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 207/479 (43%), Gaps = 89/479 (18%)

Query: 724  AIIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQET 772
             +IFV     A ++ ++  EL           P  +     S+     + E    + +E 
Sbjct: 930  GLIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESVKEDPRAAEAEHKKQEEV 989

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR     +LV+T V EEG+D+ QCN+V+RFD      +Y+ S GRAR   + Y  +I
Sbjct: 990  LRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYVHSCGRARGHDTFYFHLI 1049

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD----TSR-LISVDAVPGTVYQVES 887
             +      +FL +           A ++  +SH       T R ++S +A       +  
Sbjct: 1050 TKNQ--EISFLHDMAT------YSAFQQVLVSHCGSVEVGTDREVLSSEANAAHAPYLTP 1101

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSCKLQLPCNAPF 946
              A V++ SA+GL++ YC++LPSD ++ L   + + E  E      +Y CK+ LP N+P 
Sbjct: 1102 AEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIEEAEVEIPKYKCKIMLPINSPL 1161

Query: 947  E-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV---------- 995
            +  +EGP  S + LA+ A  L  C++LH+M    D L P    G++  K+          
Sbjct: 1162 KGTIEGPWQSKVSLAKMAAALECCRRLHQMEELDDQLQP---VGKESMKLDDHLCAPPAD 1218

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV----- 1050
            DQ  EG P PGT + R++  + VA  L GE    G D         LF+Y +  V     
Sbjct: 1219 DQVPEGMPRPGTTKRRQYCYKKVAVCLTGEQPKQGLD---------LFVYKLDMVLTCPI 1269

Query: 1051 -------------------NNGISKDPFLTQVSDFAVLFSS--------ELDA------- 1076
                               + GI     ++QVS F V   S        E++        
Sbjct: 1270 PDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEIERKVNVTQD 1329

Query: 1077 ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            +L++L+ FH    + VL   +E Y   +DP  A     +V     +     DW+ V++I
Sbjct: 1330 QLSALQYFHKFTFTHVL--RLEKYPIKFDPTNARTAFYIVPLNKFNGSEGTDWEFVKEI 1386



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S FP          + ++  YY  KYG+++    QPL+     S   
Sbjct: 1430 FYVAEICTHLNPQSDFPDAG-------FETFEKYYLTKYGLQICNLAQPLLDVDHTSGRL 1482

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR  +         SEE +    E L +     L PELC IHP P SL R A  LP
Sbjct: 1483 NLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQ--ILVPELCTIHPFPASLWRKAVCLP 1540

Query: 1360 SIMRRVESMLLAIQLK 1375
            +I+ R+ ++LLA QL+
Sbjct: 1541 TILYRINALLLADQLR 1556



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 1374 LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             ++KI Y     S +L+A T AS  +   T CY+R E LGDA L ++++R L+    Q  
Sbjct: 2220 FEEKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHS 2279

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
             G LT +R  +V+N +    A+      Y +   F+P
Sbjct: 2280 PGALTDLRSALVNNTIFASLAVKYDYHKYFR--HFSP 2314



 Score = 44.7 bits (104), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 30/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNKKMLAVFLVPKV 361
           R YQ+++++   K NT++ L + + +T +  ++ R + +     ++  K    +      
Sbjct: 18  REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           P + +  E I++ T   V  Y      + W   RW + F   QV++MT  +L   L   +
Sbjct: 78  PGLVRAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQVIIMTVDVLEKGLETGL 137

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           ++++ +NLL++ + H      P   V++         +   + GMT SPV L    S   
Sbjct: 138 LQLDMLNLLVITDAHRVATFPPLIKVLNLC-------RGCRILGMT-SPV-LSHACSPPQ 188

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
               + +L+     VV T  +   + ++V  P E +V       +    +  ++ EV +E
Sbjct: 189 LESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIV-------MCRDPDPDERSEVELE 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY----ALG 597
                  RR   + +   D   + +L +VYG   +   D   +  ++ R I       L 
Sbjct: 242 ------VRRLVGEALSFLD-NHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLN 294

Query: 598 ELGQWCAYKVA 608
            LG WCA + A
Sbjct: 295 NLGLWCADRAA 305


>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
          Length = 2482

 Score =  240 bits (612), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 176/514 (34%), Positives = 258/514 (50%), Gaps = 62/514 (12%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D +N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ FL+  YPQ+HEG+L+
Sbjct: 1962 DLLNHPGPSPSVILQALTMSNANDGVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKLS 2021

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVL-------PVFDEDTKDGD 1486
             +R + VSNL LY+    KGL   + A +F P   W  PG          + D     G 
Sbjct: 2022 YLRSKQVSNLNLYRLGKRKGLGECMVATKFEPHDNWLPPGYFVPRELEEALIDSGVPAGH 2081

Query: 1487 SSLFDQ-----------EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---SYRVLSS 1532
             ++ D             + V E      ++ NE    ++   +   D      Y +L+ 
Sbjct: 2082 WNMADLPGLHDLASDEIRRLVQERSEQIKRSKNEQATSELMATQNPHDLPIFIPYNLLTQ 2141

Query: 1533 -----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPE--------EVG 1574
                 K++AD VEALIG Y    G   A   M W+GI+V     E  PE         + 
Sbjct: 2142 HSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLEDSPETGQLIIYGHLE 2201

Query: 1575 CPSRPA--CVPESVLRSVD-----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CY 1626
             P  P   C      + +D     +   E+ +   F+DR  L++A THAS   + ++ CY
Sbjct: 2202 SPQSPLYHCPLTDTKKELDLLLSGYQVFEEKIGYTFQDRSYLLQAFTHASYYKNRLTDCY 2261

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AVK+  H + RH 
Sbjct: 2262 QRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYDYHKYFRHF 2321

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGL--------GDCKAPKVLGDIVESIAGAIFLD 1738
            S  LDR IRDFVK   E   K     + +         D + PK LGD+ ES+AGAIFLD
Sbjct: 2322 SPGLDRVIRDFVKMQEENGHKINEEYYFMEEDECEAAEDIEVPKALGDVFESVAGAIFLD 2381

Query: 1739 SGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATV 1795
            SG     VW V+  ++   +      +P  P+REL E   + A+  + +    G +  +V
Sbjct: 2382 SGSSLDAVWSVYYTMMCREIEQFSGVVPKSPIRELLEMEPETAKFGKPERLVDGKVRVSV 2441

Query: 1796 EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            E++  G   GV +N   ++A+  AA+ AL  LK+
Sbjct: 2442 EIFGKGSFSGVGRN--YRIAKSTAAKRALRHLKK 2473



 Score =  144 bits (362), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 219/495 (44%), Gaps = 91/495 (18%)

Query: 710  IKILLKYQHTEDFRAI---IFVERVVAALVLPKVFAEL-----------PSLSFVKSASL 755
            IK  +K  + ED  ++   IFV     A ++ ++  EL           P  +     S+
Sbjct: 923  IKEKVKVHNPEDPDSVCGLIFVHHRSMAKIIYRLLKELSDIGGDFAWIFPQYTVEAKESV 982

Query: 756  IGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                 + E    + +E + +FR     +LV+T V EEG+D+ QCN+V+RFD      +Y+
Sbjct: 983  KEDPRAAEAEHKKQEEVLRRFRHHECNILVSTRVLEEGIDVPQCNLVLRFDPPTDYRSYV 1042

Query: 816  QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD----TSR 871
             S GRAR   + Y  +I +      +FL +           A ++  +SH       T R
Sbjct: 1043 HSCGRARGHDTFYFHLITKNQ--ELSFLHDMAT------YSAFQQVLVSHCGSVEVGTDR 1094

Query: 872  -LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
             ++S +A       +    A V++ SA+GL++ YC++LPSD ++ L   + +E  E+  G
Sbjct: 1095 EVLSSEANAAHAPYITPAAAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEMEETAG 1154

Query: 931  PTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG 989
              +Y CK+ LP N+P +  +EGP    + LA+ A  L  C++LH+MG   D L P    G
Sbjct: 1155 ALKYKCKIMLPINSPLKGTIEGPWQDKVSLAKMAAALECCRRLHQMGELDDQLQP---VG 1211

Query: 990  EQQEKV----------DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKL 1039
            ++  K+          DQ  EG P PGT + R++Y + VA  L GE    G D       
Sbjct: 1212 KESMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLD------- 1264

Query: 1040 FHLFMYTVKCV------------------------NNGISKDPFLTQVSDFAVLFSS--- 1072
              LF+Y +  V                        + GI     ++QVS F V   S   
Sbjct: 1265 --LFVYKLDMVLTCPIPDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEV 1322

Query: 1073 -----ELDA-------ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKS 1120
                 E++        +L++L+ FH    + VL   +E Y   +DP  A     +V    
Sbjct: 1323 VVHVQEIERKVNVTQDQLSALQYFHKFTFTHVL--RLEKYPIKFDPTNARTAFYIVPLNK 1380

Query: 1121 VDPMNELDWDLVEKI 1135
             +    +DW+ V++I
Sbjct: 1381 FNGSESIDWEFVKEI 1395



 Score = 71.6 bits (174), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 67/136 (49%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S FP          + ++  YY  KYG+++    QPL+     S   
Sbjct: 1439 FYVAEICTHLNPQSDFPDAG-------FETFEKYYLTKYGLQICNLAQPLLDVDHTSGRL 1491

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR  +         SEE +    E L +     L PELC IHP P SL R A  LP
Sbjct: 1492 NLLTPRHVNRKGVALPTTSEETKRAKRENLQQKQ--ILVPELCTIHPFPASLWRKAVCLP 1549

Query: 1360 SIMRRVESMLLAIQLK 1375
            +I+ R+ ++LLA QL+
Sbjct: 1550 TILYRINALLLADQLR 1565



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             ++KI Y     S +L+A T AS  +   T CY+R E LGDA L ++++R L+    Q  
Sbjct: 2229 FEEKIGYTFQDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHS 2288

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
             G LT +R  +V+N +    A+      Y +   F+P
Sbjct: 2289 PGALTDLRSALVNNTIFASLAVKYDYHKYFR--HFSP 2323



 Score = 45.8 bits (107), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 30/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNKKMLAVFLVPKV 361
           R YQ+++++   K NT++ L + + +T +  ++ R + +     ++  K    +      
Sbjct: 18  REYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRSKEQGGKGQRTLLTGWSG 77

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           P + +  E I++ T   V  Y      D W   RW   F   QV++MT  +L   L   +
Sbjct: 78  PGLVRAGEAIQQNTNLAVTTYTRLEQVDGWLPSRWSHTFTEAQVIIMTVDVLEKGLETGL 137

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           ++++ +NLL++ + H      P   V++         +   + GMT SPV L    S   
Sbjct: 138 LQLDMLNLLVITDAHRVATFPPLIKVLNLC-------RGCRILGMT-SPV-LSHACSPPQ 188

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
               + +L+     VV T  +   + ++V  P E +V       +    +  ++ EV +E
Sbjct: 189 LESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIV-------MCRDPDPDERSEVELE 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY----ALG 597
                  RR   + +   D   + +L +VYG   +   D   +  ++ R I       L 
Sbjct: 242 ------VRRLVGEALSFLD-NHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLN 294

Query: 598 ELGQWCAYKVA 608
            LG WCA + A
Sbjct: 295 NLGLWCADRAA 305



 Score = 42.4 bits (98), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
            EV C S  + + E +  S DF    D L        ++++A+T  S  + GV+  +RLE 
Sbjct: 1940 EVQCSSWNS-ICEEMSFSFDFQP--DLLNHPGPSPSVILQALT-MSNANDGVN-LERLET 1994

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            +GD+ L + IT  L+ +Y     G+L+ LR+  V+N N  R+  +  L
Sbjct: 1995 IGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGL 2042


>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
          Length = 1656

 Score =  239 bits (609), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 196/737 (26%), Positives = 352/737 (47%), Gaps = 80/737 (10%)

Query: 279 NGINQECNGKVGKKSEAKEKMPEE-QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           + ++++  G  G   E +E + +E  AR YQ ++L  A + N I +L TG+GKT +A ++
Sbjct: 2   DDLDEDLAGLPGDTKEKEEVINDEFVARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMI 61

Query: 338 IRSICNDLQRQNKK--MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQR 395
           I+    D++++  +    A FLV  V LV QQA+ I+ QT + VG Y G+ G D W  Q 
Sbjct: 62  IKHFGADIEKKLSEGGKRAFFLVNTVQLVEQQAQSIKRQTTFTVGEYTGQTGCDLWSEQI 121

Query: 396 WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT 455
           W+RE D K V+VMT+QILLN+L HS +K+  I +++ DECH+AVK HP   +M +F+   
Sbjct: 122 WKRELDNKSVIVMTSQILLNLLSHSYLKLSNIRIIVFDECHNAVKDHPMRCIM-KFFENV 180

Query: 456 SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESK-LDSVVCTIKDRKEL--EKHVPM 512
              ++P V G+T S +N      +V+  I+   LE+  L  ++ ++ +   L   ++   
Sbjct: 181 PASQQPHVVGLTGSLLNSTIDEGKVNEYIR--ELEATFLSRIITSVNENMALAIARYSTD 238

Query: 513 PSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSS---RRSKWQFMGARDAGAKEELRQ 569
           P + +V +     + S  E    + + ++ A ++ +    + +  F+  + +        
Sbjct: 239 PQQEMVAFSPGTHMRS--ELCTSINIVLDSAIRNVTLFNLKMEEDFVPLKPS-------- 288

Query: 570 VYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKF 629
           ++ ++    +     L   +  I Y +  LG + AYK A + +  L+  +R+        
Sbjct: 289 IHAIAMEENNKLNKKLANMIVDIKYQMENLGAYGAYKAALAMMILLERKKRSAQLRKHAA 348

Query: 630 QESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHV 689
              YL  +++L++                                   +   V+S  E  
Sbjct: 349 AFQYLCTMLTLVR----------------------------------KISFDVLSKYEGE 374

Query: 690 DVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF 749
           + II        V+ KV  L+++   ++ T+  +A+IFV R  +   L  +  +L  L  
Sbjct: 375 ERIIRF------VSNKVLKLLELFKGFKETD--KALIFVTRRFSCKCLQYILEDL-KLPN 425

Query: 750 VKSASLIGHNNS--QEMRTFQMQETIAK-----FRDGRVTLLVATSVAEEGLDIRQCNVV 802
           VKS  ++G+N +   + R   +++ + K     F  G   +L+A+ V EEG+D++ CN V
Sbjct: 426 VKSDFIVGYNTNPFNDTREGLLEKKVNKKVLKRFNGGDTNVLIASDVLEEGIDVQTCNTV 485

Query: 803 IRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI---- 858
           I+FD   T+ +YIQS+GRAR   S + +M E  +      +      E  L+ E +    
Sbjct: 486 IKFDPPTTMRSYIQSKGRARTRQSKFYIMTEAKDYKVEGKINKFERLETKLKHELVGKFL 545

Query: 859 ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP 918
           ER+  S  +  + +      P   Y +   G  +  ++ + LI+ YC  L  DR+S L P
Sbjct: 546 ERSLPSEKELANSIFKTTIKP--FYPLGPDGPKIEGSTPIALINRYCMSLDCDRFSTLTP 603

Query: 919 EFIMERHEKPG-GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
            +  E  +K G         LQLP ++P  + ++     ++ LA+++  L ACK L++  
Sbjct: 604 FWWKEVSKKNGFNENNIVVYLQLPISSPVRDVIKSDAFPNVELAKRSAALKACKLLYDSR 663

Query: 977 AFTDMLLPDKGSGEQQE 993
              D +LP   + +Q E
Sbjct: 664 ELDDKMLPRGKTSQQLE 680



 Score =  193 bits (490), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 207/413 (50%), Gaps = 63/413 (15%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V  +  L+ LTAAS  + F  ER E LGD++LK+ VS  LF+++P+  EGQLT ++ +++
Sbjct: 1173 VELADFLQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVI 1232

Query: 1442 SNLVLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
             N  L+     KGL S I+A  F   S W APG     D   ++    L    + + E  
Sbjct: 1233 GNRNLFYCGEQKGLGSIIKAVEFNTESDWIAPGF--CVDRTVQNLFRELNINPRYLYEIP 1290

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSS-------------------------SYRVLSSKTL 1535
            L  D         ++E G+L   +                          S +V S+KT+
Sbjct: 1291 LSRD---------EIECGKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVTSNKTV 1341

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG--CPSRPACVPESVLR--SVD 1591
            +D VEAL+G+Y    G +    +++W+ +    DP+ +     ++    P  + +   +D
Sbjct: 1342 SDSVEALLGLYIQSYGLEKGFDMLRWLKV---IDPKLITPDVYTKKKVEPTILFKGGQID 1398

Query: 1592 FHA-----LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            FH      LE  +  KFKDR  L++A++H + +P++    YQRLEF+GDA+LD L+T H+
Sbjct: 1399 FHIHHPDYLEKLINYKFKDRTFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHM 1458

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            +    NL PG LTDLR+A VNN   A +AV+  LH  L   S  L + I  FV+   +E 
Sbjct: 1459 YEYCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVER--QES 1516

Query: 1706 LKPGFNSFGLG-----DC------KAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
                F+   L      DC      + PK+LGD+ ES+ GAIFLDS +     W
Sbjct: 1517 RNHDFSDDTLFLIDEIDCIIGESIEVPKILGDVFESLVGAIFLDSNKCLKTTW 1569



 Score = 48.1 bits (113), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 11/122 (9%)

Query: 1259 TAESSFPRKEGYLGPLEYSSYADYYKQKYG-VELIFKKQ-PLIRGRGVSYCKNLLSPRFE 1316
            TA S FP  +       Y +Y  Y+  KY  VE ++  Q PL+  R +S   N L PR  
Sbjct: 925  TALSDFPSGD-------YPTYEKYFVTKYANVEKLYSAQKPLLEVRALSRRLNCLRPR-- 975

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD 1376
            HS +   + ++  ++ +   L PELC    +P +    A  LPS + R+ ++LLA +L+ 
Sbjct: 976  HSVQATSKRKKKQEEEFEESLVPELCVRCAVPAAYWLKATLLPSCVHRITALLLADELRV 1035

Query: 1377 KI 1378
             I
Sbjct: 1036 TI 1037


>gi|398392319|ref|XP_003849619.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
 gi|339469496|gb|EGP84595.1| dsRNA-specific nuclease [Zymoseptoria tritici IPO323]
          Length = 1537

 Score =  237 bits (604), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 243/890 (27%), Positives = 388/890 (43%), Gaps = 147/890 (16%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQ---NKKMLAVFLVPK 360
            R YQ+++ E+AKK+NTIA L+TG+GKTLIAVLL+R  I N+L+ +       ++ FLV  
Sbjct: 94   REYQIELFERAKKENTIAVLDTGSGKTLIAVLLLRWMIDNELEDRAAGKPSRVSFFLVSS 153

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
            V LVYQQ  V+     + V   CG    D ++   W++ F   +V+V TA+IL   L  S
Sbjct: 154  VTLVYQQHSVLECNLDHKVARLCGADNVDRFNKSSWEKLFYENKVIVCTAEILFQCLSRS 213

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-PSVFGMTASPVNLKGVSSQ 479
             I M+ INLLI DE HHA + HP++ ++ +FY T       P VFGMTASP         
Sbjct: 214  YITMKQINLLIFDEAHHAKQNHPFARIVKDFYLTEPDATSCPRVFGMTASP--------- 264

Query: 480  VDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
            +D    +    S+L++++ C I    ++                     SL E +K+ + 
Sbjct: 265  IDAKTDVVQAASELETLLGCRIATTSDM---------------------SLAESIKKPKE 303

Query: 539  AVEEAAQSSSRRSKWQFMGARDAGAK----EELRQVYG-VSERTESDGAANLIQKLRAIN 593
             V             Q+      GA+    + L+  YG V    ++   A  I ++    
Sbjct: 304  CV------------LQYDALPQTGAETLLLQSLKARYGHVEVFNKTFEQATDISRV---- 347

Query: 594  YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
                 LG+WCA                          +S+L   +   + + +E  V ++
Sbjct: 348  -----LGRWCA--------------------------DSHLVDALGSDKLKKLEATVERR 376

Query: 654  DAKVVDSENGFVEGGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
                  S+    E    E+E    EL D+      +       A V    V+ KV SL  
Sbjct: 377  FYARDRSQAADSEARQAELERQLKELRDAVAYVQEQATSTANLATVTADDVSSKVWSLRG 436

Query: 712  IL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQEMRTF 767
             L  +++   + R I+FV++   A +L ++F ++ +   + S  LIGH   N  +   TF
Sbjct: 437  HLDAQFERPSNHRCIVFVDQRYTARLLTRLFQKIGT-KHLHSQFLIGHGSGNADEGSFTF 495

Query: 768  QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            + Q  T+ KFR G    L ATSVAEEGLD+  CN+V+RFD+ KT++ Y+QSRGRAR   S
Sbjct: 496  RQQVWTLLKFRKGVFNCLFATSVAEEGLDVPDCNLVVRFDMYKTMIQYVQSRGRARNINS 555

Query: 827  DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS---------VDA 877
             +I M+E GN      L   R+ E+ +R       D  +L    R +          ++ 
Sbjct: 556  TFIHMLEMGNSIQTNLLNEVRHQEKAMR-------DFCNLLPADRKLDGNQDGLNELLEK 608

Query: 878  VPGT-VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
               T  Y V +TGA ++  +A+ ++  + S +PSD      P  ++    +     ++  
Sbjct: 609  EKNTRTYTVPATGAKLTYGNALSILAHFVSAVPSDSDEPQHPTCVISVTGQ-----KFLA 663

Query: 937  KLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            ++ LP N+P   + G      +LA+ +    AC +L +       L+P       Q+K+ 
Sbjct: 664  EVLLPGNSPIRSVLGRPEQRKQLAKCSAAFNACLELRKKEYLDAHLMPI-----YQKKLP 718

Query: 997  QNDEGEPLPGTARHREFY----PEGVAD---ILQGEWILSGRDGCTGSKLFHL-FMYTVK 1048
                     G  + + F     P+  A+   I+  +  ++  D   G    H  F    +
Sbjct: 719  AMRNALLATGMDKTKGFAMQVKPKIWAEQRGIVPSQLWITLVDFPQGLDRPHRSFAMLTR 778

Query: 1049 CVNNGISKDPFLTQVSDFAVLFSSELDAELASLKNFHVRLMSIVLDV--DVEPYTTPWDP 1106
                 + K P    +   + + S+ L   L        +L +  L +  DV   T   D 
Sbjct: 779  SSILQLPKFPVFPSIGKSSDVVSASLSRPLEVTSQLLAKLTAFTLRIFLDVFSKTYEEDD 838

Query: 1107 AK-AYLFVPVV-----------SDKSVDPMNELDWDLVEKI--TKTDAWT 1142
            AK +Y  VP               +S+DP   +DW+LVE +   K   WT
Sbjct: 839  AKLSYWLVPTTIALHGDEASKDRIRSIDPREVIDWNLVESVFDNKEHKWT 888



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 222/536 (41%), Gaps = 93/536 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+I    V   +N+L+      ++QE      +  +   ++ PE   I  +P  L    
Sbjct: 963  QPVIEAEKVLLRRNMLAS----PDQQE------VSVSTKAYICPEPLRISAIPPELATSL 1012

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+++ R+E+ L++I+    +      +  L A T  S        QE          
Sbjct: 1013 LFWPAVIHRIEAYLISIEGSASVGVACDPTFALAAFTKDSDNQGEHEAQERVNFQRGMGE 1072

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E +GD +LK   +   F++ P  +E +    R QM+ N  L+++AL   L  YI+
Sbjct: 1073 NYERLEFIGDTFLKTATTISTFIQNPNDNEFEFHVRRMQMLCNKNLFEHALEYKLYEYIR 1132

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F    W   G+                         KL       + ++ +M   E+
Sbjct: 1133 SMAFNRRTWYPEGM-------------------------KLMAGTGVIKGQEKEMYHSEM 1167

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGK-DAANHLMKW-IGIQ-----VESDPEEV 1573
                    VL  KT+ADV EALIG  ++   + D       W   IQ     V+SD   +
Sbjct: 1168 T------HVLGKKTIADVCEALIGAAFLTHNQPDEKWQPHHWEPAIQAVTKLVKSDDHTM 1221

Query: 1574 GCP---SRPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRP--SSG 1622
                       +P+     V     + A KI+      F    LL  A +H S P   + 
Sbjct: 1222 LTMDDYKAAYLLPDYQTAHVTAVQRDLAEKIQLEHAYSFNYPRLLYSAFSHPSNPYMHAQ 1281

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
            V  YQRLEF+GDA+LD     +LF+ +    P  LT+ + A V+N+    + V    H H
Sbjct: 1282 VPNYQRLEFLGDALLDQASISYLFYKFPAADPQWLTEHKMAMVSNKFLGALCVNIGFHKH 1341

Query: 1683 LRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK--------APKVLGDIVESIAGA 1734
            LRH  S+L +QI  +V E++E     G       DC+         PK L D++ES  GA
Sbjct: 1342 LRHSHSSLGKQIHAYVDELVEARTSSG------PDCRDYWTTVSDPPKCLPDVIESFVGA 1395

Query: 1735 IFLDSGRDTSVVWQVFQP----LLDPMVTPETLP-MHPVRELQERCQQQAEGLEYK 1785
            +F+DS  + + V + F+       + M   +T    HP   L +R Q     ++Y+
Sbjct: 1396 MFIDSNFNFAEVQRFFEEHVKWYFEDMSIYDTFANNHPCTHLHQRLQTGFGCMDYR 1451


>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
          Length = 1651

 Score =  236 bits (602), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 260/935 (27%), Positives = 413/935 (44%), Gaps = 155/935 (16%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND----LQRQNKKMLAVFLVPK 360
            R YQ+ +LE A K NTI  L   + KT IAV+LI+ + +     LQ   K+ L  FLV  
Sbjct: 17   RTYQVALLENALKHNTIVCL--ASRKTFIAVMLIKELAHQVRQPLQLGGKRTL--FLVYS 72

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
               V  Q +V+   T   VG  C +         +WQ EF   QVLV++AQ+ + IL   
Sbjct: 73   DDDVEAQVKVLGLHTDLSVGECCADST-----VAQWQEEFVKHQVLVISAQVFVEILLQG 127

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
              ++   NLLI D+C HA++   Y  +M +FY   +  +RP + G+T S      +S Q+
Sbjct: 128  AAQISQTNLLIFDDCQHAIEDPAYEKIM-QFYTDQTNGQRPRILGLTTS-----ILSEQI 181

Query: 481  DCAI----KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE---YDKAASLWSLHEQL 533
             C I     +  LE  L S V T  D   ++ +   P E V+E   YD    L       
Sbjct: 182  SCPIALEKTLATLEKVLHSTVETSSDIINIDLYGNKPQESVIECVAYDDPTGLV------ 235

Query: 534  KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
                     A  S+   S   F+   +   +E+  +    +  TE               
Sbjct: 236  ---------AEFSTILDSCMAFLDDCNIAFEEKDPRAIPKTVVTEC-------------Q 273

Query: 594  YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
              L ELG WCA KVA  FL  L        +   +    Y+   ++++    VE      
Sbjct: 274  IILRELGPWCAGKVAHIFLKQLSKLLEHETEKMCRMFMQYIFTQLTIIH-STVENVY--- 329

Query: 654  DAKVVDSENGFVEGGTNEIEEGELL------DSHVVSGGEH-VDVIIGAA----VADGKV 702
            D +++  E          I+  ++L      D+ V+ G ++ +D I  +     ++D + 
Sbjct: 330  DNQILCLEEFLQLMSPRIIQLIKILHNYKPDDNFVIMGNDNFMDAIYDSEGSTDISDEEN 389

Query: 703  T-PKVQ-------SLIKILLKYQHTED------FRAIIFVERVVAALVLPKVFAEL---- 744
            + PK Q       +L K  + +   +D         ++FVER   A VL K+  EL    
Sbjct: 390  SEPKPQQVHSTTSNLSKRAVTHHRRQDNPEDESLCGVVFVERRHTAFVLNKLIVELCNWD 449

Query: 745  PSLSFVKSASLIG------HNNSQEMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIR 797
              L FV+S  + G      +N+SQ+   ++ QE I K FR   + LLV+TSV EEG+D  
Sbjct: 450  TDLFFVQSHHICGGAAGPTNNSSQQTPLYKKQEEILKRFRQKDLNLLVSTSVLEEGIDFP 509

Query: 798  QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKE 856
            +CN+V++FD   +  +Y+QS+ RAR   S Y ++ E  N     T L   +  E  L  +
Sbjct: 510  KCNLVVKFDAPTSYRSYVQSKARARALKSKYYILTEPTNQGPFHTTLSTYKGIENILISK 569

Query: 857  AIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSIL 916
             ++  +     D    +  + +P  VY V   GA V+++SA+ L++ YC +LPSD ++ L
Sbjct: 570  CLQSRENPLRDDDDASLPDNFMP--VY-VSPGGAKVTMSSAIALVNRYCGKLPSDAFTHL 626

Query: 917  RPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEM 975
             P+  ++   +    T +   LQLP N+P ++ + G    S +LA  AV L  C+ LH+ 
Sbjct: 627  TPKCQVQAINEADQET-WRATLQLPINSPIKRPIYGEAMPSRKLAMMAVALKTCEILHQQ 685

Query: 976  GAFTDMLLP-----DKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGE----- 1025
            G   D LLP      K   E+ E  D   +G   PGT + +++Y +  A  L G+     
Sbjct: 686  GELDDHLLPIGKEMIKYEDEENEWEDHETQGHARPGTTKRKQYYLKKTASTLLGQPQPNE 745

Query: 1026 ----WILSGRDGC-------TGSKLFH--------LFMYTVKCVNNGISKDPFLTQVSDF 1066
                +I   R  C       T  +  H          + TV+ +   +   P  T+  + 
Sbjct: 746  PCHLYIFDTRLTCPITEEQNTRGRKIHAPEDSARGFGIITVRKI-PLVPHFPVFTRSGEV 804

Query: 1067 AV---------LFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKA---YLFVP 1114
             V          F++E   +L  + +FH  + + VL ++ +P    +DP KA   Y  VP
Sbjct: 805  TVSIDPVDSEFTFTAE---QLPQICHFHRFIFTRVLRLEKDPMV--FDPKKAMSSYFIVP 859

Query: 1115 VVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRAR 1149
            ++ D   D +  +DWD V +I K+     PL   R
Sbjct: 860  LLKD--ADGI-RVDWDFVGEIQKS-----PLHLTR 886



 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/514 (33%), Positives = 256/514 (49%), Gaps = 64/514 (12%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D +N+  P+   IL+ LT ++  + F  ER E +GD++LK+ ++ +L+ +YP  HEG+L+
Sbjct: 1122 DLVNFIGPSPCLILQTLTMSNANDFFNLERLETIGDSFLKFAITVYLYCEYPGIHEGKLS 1181

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVL------------------ 1475
             +R + VSN  LY+    KGL   + A +F P+  W  PG +                  
Sbjct: 1182 YLRSKQVSNYNLYKLGKKKGLPDCMVAVKFEPTENWLPPGYVIRKEGAYKGLNVRIASIP 1241

Query: 1476 -----PVFDEDTKDGDSSLFD--QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR 1528
                 P F+E     +  L D   EK   E +  T     + +  D+    +  +  +  
Sbjct: 1242 APLLAPAFNESGSKKEEQLPDGQMEKFTKELEECTKAEDEKLKGSDIPHMLIPYNLQTQH 1301

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPACV- 1582
             L  K++AD VEALIG Y V  G+ AA   M W+G++V      +D   +   S  +C+ 
Sbjct: 1302 SLPDKSIADGVEALIGCYLVTCGQRAALQFMSWLGLRVLPNVKPADKNNLAM-SGFSCLP 1360

Query: 1583 ------------PESVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQ 1627
                         E VL+ +   +   E+ +  KF+DR  L++A THAS   + V+ CYQ
Sbjct: 1361 PPPSPLLTHVSNSEDVLKHLLDGYEEFEEKICYKFRDRSYLLQAFTHASYHYNTVTDCYQ 1420

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GDA+LD++IT+HLF       PG LTDLR+A VNN  FA +AVK   H + R  S
Sbjct: 1421 RLEFLGDAILDYVITRHLFEDSEKHSPGVLTDLRSALVNNNIFAALAVKWNFHKYFRAIS 1480

Query: 1688 SALDRQIRDFV---KEVLEEL-------LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFL 1737
              L   I  FV   K+  +E+                  D + PK LGDI ES+AGAI+L
Sbjct: 1481 PQLFYVIDKFVTWQKDRNDEINLDEEFGELEEDGEGTEEDIEIPKALGDIFESVAGAIYL 1540

Query: 1738 DSGRDTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEYKASRSGNL-AT 1794
            DSG     VWQV+  ++ P +    E +P  PVREL E   + A+  + + +  G +  T
Sbjct: 1541 DSGMSLDTVWQVYYRMMKPQIDAFTERIPKSPVRELLEMEPETAKFEKPERTMDGKIRVT 1600

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            V V   G   G+ +N   ++A+  AA+ AL  +K
Sbjct: 1601 VNVVGKGNFRGIGRN--YRIAKSAAAKRALKHIK 1632



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 23/163 (14%)

Query: 1231 NAGDLEGRIVTAAHSG----KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQK 1286
            N  D    +V  ++      + FYV  IR ++  +  FP       P  Y ++  YYK K
Sbjct: 901  NEDDFHDAVVMPSYRNIDQPQYFYVAEIRKDLNPKCPFP------SPELYDTFELYYKSK 954

Query: 1287 YGVELIFKKQPLIRGRGVSYCKNLLSPRFEH----------SEEQEGEGEEILDKTYYVF 1336
            YG+ +    QPL+     S   NLL+PR+ +          +E +    E +  K     
Sbjct: 955  YGLGITNLDQPLLDVDHTSARLNLLTPRYMNQKGVALPTSSAETRRARRENLQQKQ---I 1011

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            L PELC IHP P SL R A  +P+I+ R+  +L+A +++  I+
Sbjct: 1012 LIPELCDIHPFPASLWRKAVCIPAILYRMNYLLVAEEMRLMIS 1054


>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
          Length = 1628

 Score =  236 bits (601), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 181/694 (26%), Positives = 331/694 (47%), Gaps = 83/694 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ--NKKMLAVFLVPKVP 362
           R YQL++LE  KK NTI +L TG+GKT IA +L++++ + L +   + +    F+V  VP
Sbjct: 14  RKYQLELLEDVKKSNTILYLPTGSGKTYIATMLVKNLGDCLTKPIGHGRKWTFFIVQSVP 73

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV QQA  +R    + +G + G+M  DFW  + W    +   +LVMTAQI LN L H  +
Sbjct: 74  LVAQQANNLRRHLPWSIGTFSGDMNVDFWSQKHWDEILEKCHILVMTAQIYLNNLHHGYM 133

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT-SKEKRPSVFGMTASPVNLKGVSSQVD 481
            ++  NLLI DECHHAV  HP+  +M   + +  + ++RP + G+TA+ +N    S+  +
Sbjct: 134 HIKDANLLIFDECHHAVALHPFKQIMQVLHDSNLNIDERPHILGLTATLIN----SNTKN 189

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
              ++  L++  ++ + T  D + ++     P E +  YD+    + L +++    VA+ 
Sbjct: 190 VKDELTKLQNTFNATIKTKYD-ENIQIFSARPEEFISLYDE----YILDDEM----VAIT 240

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ 601
           +         K +F         +E  +VY +  + +S  + N       I   L + G 
Sbjct: 241 QRISKIVDHLK-KFQAPAKIEPIKENNEVYYLENQKQS--SKNFANYFLDIEVNLSDGGP 297

Query: 602 WCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSE 661
           + A+     F+  ++   +              SK  +++   L E  + +K   V D  
Sbjct: 298 YIAFLATWHFIVEIEKKRKICTD----------SKNHTIMSMVLSEVTIIRK--LVFDYM 345

Query: 662 NGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
           N                        +H  +  G +     V+PK++ L++IL   + T+ 
Sbjct: 346 N------------------------KHSSINNGHSTTLNNVSPKLKKLMEILSSIKATD- 380

Query: 722 FRAIIFVERVVAALVLPKVFAELPS--------LSFVKSASLIGHNNSQEM--RTFQMQE 771
              ++FV+R   A +L     +             F+  A  I   +S+EM  +  Q  +
Sbjct: 381 -TCLVFVDRRTTAKILYHYIKDFIQEYNQENIVCEFIVGARGIISPDSKEMVYKKQQNND 439

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
            I KF D  + +L+ + V EEG+DI+ CN VIR+D  K   +Y+QS+GRAR   S +I+M
Sbjct: 440 IIKKFNDNIINVLITSEVLEEGVDIQTCNYVIRYDSPKNFPSYVQSKGRARSADSKFIIM 499

Query: 832 IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAV 891
           +      +       ++    + +E ++    + + D +   ++  V       ++  A+
Sbjct: 500 V-----PNQLKFEKTQSDYNKMEEEIVKILVDNDIDDENNDENMTEV------FKTKHAI 548

Query: 892 VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LE 950
           ++ + A+ +I+ YC  LP DR++ L PE+ + ++           KL+LP N+  +  ++
Sbjct: 549 LTHDVAISIINRYCFSLPQDRFTDLSPEWYIAQNNNKFK----KYKLKLPINSVIKTPID 604

Query: 951 GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           G  C+S + A+++    AC +L+++GA  + LLP
Sbjct: 605 GIFCASKKNAKKSAAFNACIELYKVGALDEYLLP 638



 Score =  173 bits (438), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 208/436 (47%), Gaps = 52/436 (11%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S IL+A+T     + F YER E  GD++LK+ VS  LF  +P  +EG LT ++ ++V N 
Sbjct: 1133 SDILKAITPPFANDMFNYERMETYGDSFLKFAVSLVLFDAFPSDNEGVLTELKMKIVGNR 1192

Query: 1445 VLYQYALSKGLQSYIQADRFAPSR-WAAP--GVLPVFDEDTKDGD--SSLFDQEKSVAED 1499
             L+    +  L SY+  + F P+  W  P  GV     E  + GD  S +  Q     ++
Sbjct: 1193 NLFYVGRNLNLGSYLTVNVFDPNMDWIPPCFGVPQTLKEIIEKGDLQSDVLHQINIPKDN 1252

Query: 1500 KLG---TDKNYNEYEDDDMEDGEL--------EGDSSSYRV-------------LSSKTL 1535
            ++    +D  + E E + ++  EL        +G+    RV             +S K +
Sbjct: 1253 QIIGILSDNTWKEIEKEIIKFKELSDITMSDSDGEEDIPRVGHSQSDLFIYKQSVSDKMV 1312

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD VE+LIG Y  + G +    +++ +GI     P++     +P  + E++   + F   
Sbjct: 1313 ADCVESLIGTYVYKRGVEVGFKVLQGLGII----PKQFIDAFKPKPI-ENIYNDLSFSKV 1367

Query: 1593 ----HALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
                  LE  +   FK + LL +A+TH +       CYQRLEF+GDA+LD LIT ++   
Sbjct: 1368 LPGYELLERRIGYSFKHKHLLAQALTHPTYQFGYTECYQRLEFLGDAILDFLITTYIIQH 1427

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
                 PG +TD+R++ VNN  FA ++ +  LH  +   S  +   I  F +   +   K 
Sbjct: 1428 CYQKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKI 1487

Query: 1709 GFNSFGL---GDCKA------PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            G     L    DC A      PKVLGD+ ES+  AI+LD GRD + VW      L+  + 
Sbjct: 1488 GQEILYLIEESDCYAAESVDVPKVLGDLFESLIAAIYLDCGRDLNFVWTFCYRFLENEIN 1547

Query: 1760 P--ETLPMHPVRELQE 1773
                 +P +P+R L E
Sbjct: 1548 EFCTNVPKNPIRILHE 1563



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            +R+ V  +  +MT ESSFP  E       Y +Y  Y+  KY + +  K QP+I+ + +  
Sbjct: 864  QRYIVTDVYLDMTPESSFPTSE-------YDTYETYFSDKYSINVTHKDQPMIKVKSLGV 916

Query: 1307 CK-NLLSPRFEHSE-EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
             K N L PRF   + ++  E  EIL         PE C  H  P      A  LP+I+ R
Sbjct: 917  TKLNYLIPRFIIGKPDRRNEYIEIL--------IPEFCTWHKFPSVYWLKALMLPTILYR 968

Query: 1365 VESMLLAIQLKDKIN 1379
            ++ +LLA  L  KIN
Sbjct: 969  LDKLLLAEDLLIKIN 983


>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
 gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
          Length = 1941

 Score =  235 bits (600), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 221/758 (29%), Positives = 364/758 (48%), Gaps = 106/758 (13%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDL---QRQNKKMLAVFLVPKV 361
            R YQ+++L++A KKNTI  L TG+GKT IAVLL++     +     Q  K  A F+V KV
Sbjct: 14   RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPYGQGGKR-AFFIVEKV 72

Query: 362  PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREF-DTKQVLVMTAQILLNILRHS 420
             LV QQA+ I   T + VG   G    + W +     EF     V+V+TAQ LL+++ H+
Sbjct: 73   NLVEQQAKHIEVHTSFKVGQIHGMTSTELWKSPESCDEFMRQNHVVVITAQCLLDLINHA 132

Query: 421  IIKMEAINLLILDECHHAV-KKHPYSLVMSEFYH-TTSKEKRPSVFGMTASPVNLKGVSS 478
             +K++   +LI DECHHA+  KHPY L+M ++     +    P V G+TAS +  K    
Sbjct: 133  YVKLQDTCVLIFDECHHALGSKHPYRLIMIKYKELKKAGHPVPRVLGLTASLIKEKVAPE 192

Query: 479  QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV---EYDKAASLWSLHEQLKQ 535
            ++    ++  LES LDSV+ T  D   L K+   P E +V   +++        +E +  
Sbjct: 193  KL--TEQLNKLESVLDSVIETASDLVTLSKYGAKPFEALVLCRDFETENLPLPHYETIMA 250

Query: 536  MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
            + +  E+    ++      F    D   +  +R                    L+     
Sbjct: 251  LLLDTEKFVNHTT-----VFHPDLDLDPRRSIRD------------------SLKTTKAV 287

Query: 596  LGELGQWCAYKVAQSFLTALQNDERANYQLD-----VKFQESYLSKVVSLLQCELVEGAV 650
            L +LG W A+K+A  +   L    ++    D     +   ++ ++ V  LL+ E+     
Sbjct: 288  LRQLGPWAAWKIAAMWEKELSKLTKSQILPDKALLFLNLAKTSMTTVKRLLEPEM----- 342

Query: 651  SKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
             +K   + D E    +      E  E+ +                        P+ Q   
Sbjct: 343  -RKVKSLADLEKFVPQRFVRLFESLEMFE------------------------PEFQMK- 376

Query: 711  KILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-----NS 761
               +  +  E   AI+FV++   A  L  +   +        FV+S  ++G +     NS
Sbjct: 377  --RMNREVPEKLSAIVFVDQRYIAYALYVMIRNVRQWETKFKFVQSDYVVGASGQNLANS 434

Query: 762  QEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
                  + Q E + +F    + +L+ATSV EEG+D++QCN+VI+FD    + +Y+QS+GR
Sbjct: 435  DNQGLHKRQTEALRRFHKNEINVLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGR 494

Query: 821  ARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP 879
            ARK GS Y++M++  ++ S  + L++ +  E+ L      RT  +  +D S   ++D V 
Sbjct: 495  ARKMGSRYVVMVDHKDVPSCDSDLKDFQQIEKILLSR--HRTVNNPTEDDSIDFNLDDVD 552

Query: 880  GTV--YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSC 936
              +  Y VESTGA + L++A+ L++ YCS+LPSD ++ L P   I+   ++  G T+Y  
Sbjct: 553  HLMPPYVVESTGAELKLSNAIALVNRYCSKLPSDIFTRLVPHSRIIPVEDR--GVTKYCA 610

Query: 937  KLQLPCNAPFEK---LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
            +L LP N+P +    L+ P+  + + AQ AV L AC++LH  G   D LLP KG  E   
Sbjct: 611  ELLLPINSPIKHAIILKDPM-PNKKAAQMAVALEACRQLHLKGELDDNLLP-KGR-ESIA 667

Query: 994  KVDQNDEGEP---LPGTA------RHREFYPEGVADIL 1022
            K+ ++ + EP    PG A      + ++ Y + +A  L
Sbjct: 668  KLLEHIDDEPDEYAPGMALKVGSSKRKQLYDKKIARAL 705



 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 162/505 (32%), Positives = 248/505 (49%), Gaps = 63/505 (12%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L ALT ++  +    ER E +GD++LK+  + +L+     +HEG+L+  R + VSN  L
Sbjct: 1428 LLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVSNCNL 1487

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFD-EDTKDGDSSLFDQE----------K 1494
            Y+     G+   I A++F A   W  P  +P  D +   + D+   D+E          +
Sbjct: 1488 YRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNNSDAEEKDKEIERILNGQTIE 1547

Query: 1495 SVAEDKLGTD--KNYNEYEDDDMEDGELEGDSS---------SYRVL-----SSKTLADV 1538
               EDK G D   +  +   D +E       S           Y +L     S K++AD 
Sbjct: 1548 EKPEDKTGWDIGGDTAKSTADGIETINFPKQSRLLNEDISPLPYNLLTQQNISDKSIADA 1607

Query: 1539 VEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCP-----SRPACVPESVLRSVD 1591
            +EALIGV+ +  G +    +M W+G++V  +    EV  P       PA  P++ L++++
Sbjct: 1608 MEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAKTEVAHPLLRFIDTPAN-PDASLKALN 1666

Query: 1592 -------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITK 1643
                   F  LE+ +  +FK+R  LV+A THAS  ++ V+ CYQRLEF+GDAVLD++IT+
Sbjct: 1667 NLWQQYQFANLEERIGYRFKERAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITR 1726

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
            +LF       PG LTDLR+A VNN  FA +AVK +   H       L   I  FVK   +
Sbjct: 1727 YLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIEKFVKLCAD 1786

Query: 1704 ELLKPGFNS-------------FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                  FN+                 D + PK LGD+ ES+AGAI+LDSGR+    WQV 
Sbjct: 1787 RNFDTNFNAEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTWQVL 1846

Query: 1751 QPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEY-KASRSGNL-ATVEVYIDGVQVGV 1806
              ++   +       P  P+REL E    +A   +  +   SG +  TV+V  +    G+
Sbjct: 1847 FHMMRSTIDSCCANPPRSPIRELMELEASKARFSKMERILESGKVRVTVDVGNNMRFTGM 1906

Query: 1807 AQNPQKKMAQKLAARNALAVLKEKE 1831
             +N   ++A+  AA+ AL  L + E
Sbjct: 1907 GRN--YRIAKATAAKRALKYLHQME 1929


>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
 gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease DCL1; Includes: RecName:
           Full=ATP-dependent helicase DCL1
 gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
          Length = 1591

 Score =  234 bits (597), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 211/709 (29%), Positives = 325/709 (45%), Gaps = 123/709 (17%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-----RQNKKMLAVF 356
           E  R YQ+++ E+AK+KNTIA L+TG GKTLIA+LLIR I  +L+     +  +K +  F
Sbjct: 106 EGPREYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHII-ELELGARWQGREKRITFF 164

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRW-QREFDTKQVLVMTAQILLN 415
           LV KV LV QQ + IR    + V    G+  ++ W ++ + ++    ++V+V TA+IL  
Sbjct: 165 LVDKVALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYR 224

Query: 416 ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLK 474
            L  S + +  ++L++ DE HHA K H Y+ ++ +FY      +KRP +FGMTASP++ K
Sbjct: 225 CLHRSYLNISQVSLVVFDEAHHAKKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTK 284

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
                 + A     LES L S + TI DR  L+     P EV                  
Sbjct: 285 DTCISYERATH--ELESLLHSEIATISDRDLLKVIGSRPQEV------------------ 324

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
                         R+S  + +   +     +LR++ G              Q   +  +
Sbjct: 325 --------------RKSYARVLRQENTELCNQLRELVG--------NHPLFKQTFDSAEF 362

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           A+ ELG WCA K     L  L   E A   LD +                 VEG+ ++  
Sbjct: 363 AVTELGAWCADK-----LWELCFREEAVSTLDGR-----------------VEGSRARDP 400

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
            +V +S +      +N  E   L+     S  E           DG ++ K   LI+IL 
Sbjct: 401 DEVGESSHEV----SNAREALSLVQQWSFSPPE-----------DGSLSTKTHKLIEILA 445

Query: 715 ----KYQHTEDFRAIIFVERVVAALVL------PKVFAELPSLSFVKSASLIGH---NNS 761
               +       + I+FV+R   A++L       ++  ++P L   K A LIG     N+
Sbjct: 446 ECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDL---KGAFLIGAGRGGNA 502

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
               T Q ++T+++FRDG +  L ATS+AEEGLDI  CNVVIRFDL  T + YIQSRGRA
Sbjct: 503 AFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRGRA 562

Query: 822 RKPGSDYILMIERGNLSHATFLRNARNSEETLR--------KEAIERTDLSHLKDTSRLI 873
           R   S +I M E GN  H       R +E+ +R           +E+ ++  +    +  
Sbjct: 563 RMRNSWFIHMTEFGNPEHNRRWFQDRVNEQKMRDFCLSLPKDRIMEKAEVDDVLRGDQSQ 622

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
            +  VPG+   +    ++V L   V  +     ++ S  Y+++ P F        GG   
Sbjct: 623 KIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILSVDYTVV-PVF--------GG--- 670

Query: 934 YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           +  ++ LP ++P     G V  S +LA+ A   A C +L+      D L
Sbjct: 671 FQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 225/563 (39%), Gaps = 108/563 (19%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKK---------Q 1296
             ++F++  +R ++  +   P  EG   P ++ +  ++    Y V L  K          Q
Sbjct: 916  SRKFFMRKVRRDLKPQDKVP--EGVPAPSKWRA-VEHTILNYSVSLWKKSRAGHNSRQDQ 972

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            P++        +NLL       +E +GE        Y V    E   I  +P   V  A 
Sbjct: 973  PVVEAELAPLRRNLL-------DETDGENSTGPQTCYLVL---ETLLISQIPVDTVVMAY 1022

Query: 1357 RLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--------TF------CY 1402
              P+I+ R+E+ L++++    +   +P    L A+T  S            F       Y
Sbjct: 1023 TFPAIIYRLENSLISLEACQNLGLDIPIDIALIAMTKDSDNSDDHDEAPINFQSGMGQNY 1082

Query: 1403 ERAELLGDAYLKWVVSRFLF-LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            ER E LGD +LK   S  L+ L    + E  + RM    + N  L  +AL   LQ +I++
Sbjct: 1083 ERLEFLGDCFLKMATSIALYTLVEGDEFEYHVERMLD--ICNKNLLNWALESNLQEHIRS 1140

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W  PG+              L   +K+  +D+                     
Sbjct: 1141 KSFNRRTWYPPGL-------------KLLKGKKTEVDDE--------------------- 1166

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL---MKWIGIQVESDPEEVG---- 1574
                    L  K++ADV EALIG  Y+     ++ +    +K + +   S    +     
Sbjct: 1167 ------HALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQAWSD 1220

Query: 1575 ------CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS--GVSCY 1626
                  CP   +  P      +    +++ +  +FK+  LL  A  H S P     +  Y
Sbjct: 1221 YYASYQCPEWLSTPPSQTQLEL-CSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSY 1279

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GD++LD +   +LF  + +  P  LT+ + A V+N+ F  VAV    H HL H 
Sbjct: 1280 QRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHM 1339

Query: 1687 SSALDRQIRDFVKEVLEE-------LLKPG------FNSFGLGDCKAPKVLGDIVESIAG 1733
              AL   I ++ + V ++        ++ G         F +     PK L DI+E+  G
Sbjct: 1340 QPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILEAYVG 1399

Query: 1734 AIFLDSGRDTSVVWQVFQPLLDP 1756
            A+F+D+G D S V   F   + P
Sbjct: 1400 ALFVDTGYDYSAVVGFFDRHIKP 1422


>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
 gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
          Length = 1658

 Score =  234 bits (597), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 211/709 (29%), Positives = 325/709 (45%), Gaps = 123/709 (17%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-----RQNKKMLAVF 356
           E  R YQ+++ E+AK+KNTIA L+TG GKTLIA+LLIR I  +L+     +  +K +  F
Sbjct: 106 EGPREYQIELFERAKQKNTIAVLDTGTGKTLIAILLIRHII-ELELGARWQGREKRITFF 164

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRW-QREFDTKQVLVMTAQILLN 415
           LV KV LV QQ + IR    + V    G+  ++ W ++ + ++    ++V+V TA+IL  
Sbjct: 165 LVDKVALVRQQTDHIRANLDFPVTGLHGDTVRNLWYSKEYFEKLLQEQEVVVCTAEILYR 224

Query: 416 ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLK 474
            L  S + +  ++L++ DE HHA K H Y+ ++ +FY      +KRP +FGMTASP++ K
Sbjct: 225 CLHRSYLNISQVSLVVFDEAHHAKKNHVYARIIKDFYLMEEDCQKRPRIFGMTASPIDTK 284

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
                 + A     LES L S + TI DR  L+     P EV                  
Sbjct: 285 DTCISYERATH--ELESLLHSEIATISDRDLLKVIGSRPQEV------------------ 324

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
                         R+S  + +   +     +LR++ G              Q   +  +
Sbjct: 325 --------------RKSYARVLRQENTELCNQLRELVG--------NHPLFKQTFDSAEF 362

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           A+ ELG WCA K     L  L   E A   LD +                 VEG+ ++  
Sbjct: 363 AVTELGAWCADK-----LWELCFREEAVSTLDGR-----------------VEGSRARDP 400

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
            +V +S +      +N  E   L+     S  E           DG ++ K   LI+IL 
Sbjct: 401 DEVGESSHEV----SNAREALSLVQQWSFSPPE-----------DGSLSTKTHKLIEILA 445

Query: 715 ----KYQHTEDFRAIIFVERVVAALVL------PKVFAELPSLSFVKSASLIGH---NNS 761
               +       + I+FV+R   A++L       ++  ++P L   K A LIG     N+
Sbjct: 446 ECFSQASAGNAIQCIVFVKRRDTAVLLNALCEQAEIRTKIPDL---KGAFLIGAGRGGNA 502

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
               T Q ++T+++FRDG +  L ATS+AEEGLDI  CNVVIRFDL  T + YIQSRGRA
Sbjct: 503 AFTTTRQQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRGRA 562

Query: 822 RKPGSDYILMIERGNLSHATFLRNARNSEETLR--------KEAIERTDLSHLKDTSRLI 873
           R   S +I M E GN  H       R +E+ +R           +E+ ++  +    +  
Sbjct: 563 RMRNSWFIHMTEFGNPEHNRRWFQDRVNEQKMRDFCLSLPKDRIMEKAEVDDVLRGDQSQ 622

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
            +  VPG+   +    ++V L   V  +     ++ S  Y+++ P F        GG   
Sbjct: 623 KIFVVPGSKASLTFKQSLVVLAEFVATLPARPDEILSVDYTVV-PVF--------GG--- 670

Query: 934 YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           +  ++ LP ++P     G V  S +LA+ A   A C +L+      D L
Sbjct: 671 FQGEVYLPASSPLRSAMGGVYRSKQLAKCAAAYAMCIQLYNSNYLDDHL 719



 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 225/563 (39%), Gaps = 108/563 (19%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKK---------Q 1296
             ++F++  +R ++  +   P  EG   P ++ +  ++    Y V L  K          Q
Sbjct: 916  SRKFFMRKVRRDLKPQDKVP--EGVPAPSKWRA-VEHTILNYSVSLWKKSRAGHNSRQDQ 972

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            P++        +NLL       +E +GE        Y V    E   I  +P   V  A 
Sbjct: 973  PVVEAELAPLRRNLL-------DETDGENSTGPQTCYLVL---ETLLISQIPVDTVVMAY 1022

Query: 1357 RLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--------TF------CY 1402
              P+I+ R+E+ L++++    +   +P    L A+T  S            F       Y
Sbjct: 1023 TFPAIIYRLENSLISLEACQNLGLDIPIDIALIAMTKDSDNSDDHDEAPINFQSGMGQNY 1082

Query: 1403 ERAELLGDAYLKWVVSRFLF-LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            ER E LGD +LK   S  L+ L    + E  + RM    + N  L  +AL   LQ +I++
Sbjct: 1083 ERLEFLGDCFLKMATSIALYTLVEGDEFEYHVERMLD--ICNKNLLNWALESNLQEHIRS 1140

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W  PG+              L   +K+  +D+                     
Sbjct: 1141 KSFNRRTWYPPGL-------------KLLKGKKTEVDDE--------------------- 1166

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL---MKWIGIQVESDPEEVG---- 1574
                    L  K++ADV EALIG  Y+     ++ +    +K + +   S    +     
Sbjct: 1167 ------HALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQAWSD 1220

Query: 1575 ------CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS--GVSCY 1626
                  CP   +  P      +    +++ +  +FK+  LL  A  H S P     +  Y
Sbjct: 1221 YYASYQCPEWLSTPPSQTQLEL-CSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSY 1279

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
            QRLEF+GD++LD +   +LF  + +  P  LT+ + A V+N+ F  VAV    H HL H 
Sbjct: 1280 QRLEFLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHM 1339

Query: 1687 SSALDRQIRDFVKEVLEE-------LLKPG------FNSFGLGDCKAPKVLGDIVESIAG 1733
              AL   I ++ + V ++        ++ G         F +     PK L DI+E+  G
Sbjct: 1340 QPALGGSITEWAELVTKKREEARQLAVRRGQREEDYARDFWIEVHHPPKCLPDILEAYVG 1399

Query: 1734 AIFLDSGRDTSVVWQVFQPLLDP 1756
            A+F+D+G D S V   F   + P
Sbjct: 1400 ALFVDTGYDYSAVVGFFDRHIKP 1422


>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666 SS1]
          Length = 1500

 Score =  233 bits (595), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 207/729 (28%), Positives = 331/729 (45%), Gaps = 95/729 (13%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQ ++  +A+  N IA L TG+GKT I++LLI+SI +       K++ VFLVPKVPLV
Sbjct: 15   RQYQEEIFIRARHSNVIAVLGTGSGKTYISILLIKSITSQSHLSAGKIV-VFLVPKVPLV 73

Query: 365  YQQAEVIREQTGYV---VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
             QQ+  I +Q   +     H    +  D  +   W++ FD+  ++VMTAQ+ +N L HS 
Sbjct: 74   EQQSVFIEKQLPSLRVRKVHGGDALAGDMLNRAEWKKFFDSADIVVMTAQVFVNALTHSH 133

Query: 422  IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
              ++ ++LLI DECHH    HPY+++M + Y   S  +RP +FGMTAS V  +   +Q D
Sbjct: 134  WSIDKVSLLIFDECHHTRLNHPYNVIMRDSYKHCSPSQRPKIFGMTAS-VVWRPSRAQED 192

Query: 482  CAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVE-YDKAASLWSLHEQLKQMEVA 539
                +  LE+ L +   T++   +EL  H P P EV    YD+      L   +K     
Sbjct: 193  ----LQELEANLVAKAITVQMHHEELGHHSPKPKEVCAPIYDR------LEIDIKAAGSY 242

Query: 540  VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT-----ESDGAANLIQKLRAINY 594
                A        W  + AR   A   LR +   +  T      SD     IQ  +A   
Sbjct: 243  ALPVAPLDDPAIPWAIVDARYTTA---LRNLGPYAAETFLYKDLSDRLRQFIQPSQA--- 296

Query: 595  ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQ--CELVEGAVSK 652
               E+ +       +S L A+  +     QL    ++  + ++  L+     L E     
Sbjct: 297  --DEMSR------LRSQLQAMHTESSTPEQL---LRDPEMRQIYDLITEYSPLFEMPGPV 345

Query: 653  KDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKI 712
              + +  SEN F          G + D    S   HV V +                   
Sbjct: 346  HGSSIPSSENQF--------PPGWVFDLSWCSPKVHVLVEV------------------- 378

Query: 713  LLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGH--NNSQEMRTFQM 769
             L+ Q T   + I+FVE+   A  L ++ +++  L   V+ A  +GH  +  + M+  + 
Sbjct: 379  -LRNQFTPASQGIVFVEQRHVASGLARLLSKVDELKGVVRCAEFVGHASDTGEGMKAGEQ 437

Query: 770  QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
               +  FR   + LL+AT VAEEGLD   C+VV+RFD  + ++ ++QSRGRAR   S ++
Sbjct: 438  NRVLESFRKRSINLLIATQVAEEGLDFPACDVVVRFDSIQHLVGFVQSRGRARHKDSTFV 497

Query: 830  LMIERGNLSHATFLRNARNSEETLRKEAIER-------TDLSHLK-----DTSRLISVDA 877
            +M+E+G+       R  R +E                 T+L+ ++     +      VD 
Sbjct: 498  IMVEQGD--ETAIERYKRFAEIDSLSSVSSASAASETPTNLTSMRGMGSDEDDEPNEVDL 555

Query: 878  VPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS-ILRPEFIMERHEKPGGPTEYSC 936
                 + V  T AV+S N+A+ L+   C+ +P+D ++   +P +I    +       Y C
Sbjct: 556  AQRERFVVSDTKAVLSYNNAIDLLSRLCALIPTDNFTRTYKPTYITNIAQT----GYYVC 611

Query: 937  KLQLPCNAPFE----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
             L LP   P      K  GP   S R A++AV   A K L+ +  F + LLP +   + +
Sbjct: 612  SLTLPSALPLPHGHLKYTGPGKCSKREAKRAVAFLAVKALYGLNVFDEYLLPARSVKDME 671

Query: 993  EKVDQNDEG 1001
            +  +++  G
Sbjct: 672  QDAEESTGG 680



 Score =  144 bits (363), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 163/639 (25%), Positives = 279/639 (43%), Gaps = 106/639 (16%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYL----GPLEYSSY--ADYYKQKYGVELIFKKQPLI 1299
            G+ F +  IRY++T  S  P  EG +    G   Y  +  A Y ++K+ V ++   + L+
Sbjct: 837  GRSFILHRIRYDLTPSSMLP--EGSMAREAGFTTYGQWLRARYKRKKFSV-VLKDDEVLV 893

Query: 1300 RGRGVSY-CKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRL 1358
              R +   C  +      HS   +    ++ D    +F P   C    +  SL R    L
Sbjct: 894  EARRLKLQCSGIYH---LHSRPDDAVPMDVDDIDTNIF-PLSSCRWTAISTSLYRTFGLL 949

Query: 1359 PSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P ++ R+  +  A   +  +  P +    ++EA T  + +  +  +R E LGD+ LK   
Sbjct: 950  PRLLHRINDVFRAQSAQLALGLPPINTDLLIEAYTIPAARTGWNNQRFETLGDSVLKLCT 1009

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD--------RFAPSRW 1469
            S  +F KYP +HEGQL+ +RQ  +SN+ L + A +  L+S++  +        R+     
Sbjct: 1010 SVHVFNKYPWRHEGQLSVLRQVAISNMTLLRKAKAVSLESFLNTESTSNETTWRYCLPSG 1069

Query: 1470 AAP--GVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY 1527
             AP     PV D D            + V                              +
Sbjct: 1070 PAPHHPCHPVKDTDRVPLPPPSSRPRRLV------------------------------H 1099

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHL-----------MKWI---GIQVESDPEEV 1573
            R    ++L D +EA +G  Y  GG   A              + W+   G Q ES  E  
Sbjct: 1100 RRFPRRSLQDCMEATLGAAYATGGIPMALQAGTALGLNFGGSIPWLTRFGKQCESSAERP 1159

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVG 1633
            G               V F+ L++ L   F++  LLVEA+TH S  + G S YQRLEF+G
Sbjct: 1160 G---------------VLFNVLQERLGYTFRNPELLVEAMTHPSFATGGQS-YQRLEFLG 1203

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH-KLH----VHLRHGSS 1688
            DAV+D  +  +L+  + +   G+L+  RA AV+    + +AVKH  LH    V+  + S 
Sbjct: 1204 DAVIDLTVMSYLYNKFPSATSGKLSTARARAVSAPVLSSIAVKHLGLHKLMLVNETNLSI 1263

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            A+ + +    +   E+++    N++       PK + D++ES+ GA+F+DSG +  +   
Sbjct: 1264 AMGKYLPTLEETSYEDMV---LNAWA---HDPPKAISDVLESLLGAVFVDSGWNWDLAQA 1317

Query: 1749 VFQPLLD---PMVTPETLPMHPVRELQ-ERCQQQAEGLEYKASRSGNLA----TVEVYID 1800
            V + +++    +++P+T P  PV EL     +     +  + SRS   A    T+ V + 
Sbjct: 1318 VTEGVMNDVLELLSPDT-PKDPVSELMVWTAKAGCTRICLRKSRSREDAPRNDTINVVVH 1376

Query: 1801 GVQV-GVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
             V V G        +A+  A+  A  +L++ E+  + ++
Sbjct: 1377 DVDVSGPFTASSIGVARAFASERARLILQDLESPHSLQR 1415


>gi|242033789|ref|XP_002464289.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
 gi|241918143|gb|EER91287.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
          Length = 462

 Score =  233 bits (594), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 154/440 (35%), Positives = 230/440 (52%), Gaps = 48/440 (10%)

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-----NYPVPASKILEALTAASCQETF 1400
            P+  + +     +PSIM R++ +LL+ +LK ++      + + A KILEALT   CQE F
Sbjct: 3    PVSANTLFSFSFVPSIMYRIQCLLLSAKLKVQLGPRMQQFNITAMKILEALTTKECQEKF 62

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
              E  E LGD++LK+V  + LF KY  + E  LT MR + VSN  L Q A    +  YI+
Sbjct: 63   SLESLETLGDSFLKYVTGQDLFSKYTYR-EDMLTSMRGEKVSNPALCQLACKSEIVGYIR 121

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
             + F+P +W  PG+      DT+  +  LF     +             Y  D++     
Sbjct: 122  GELFSPKKWTIPGL----GYDTRGNNKVLFRTTNDM-------------YSLDEIP---- 160

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
                     + SK +AD VEAL G Y    G+ AA H +K +G+ VE   +         
Sbjct: 161  ---------IKSKRIADTVEALTGAYLSACGELAAVHFIKSLGMDVELHSKM----QVER 207

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
             V       +D  +L+  +   F D  LL+EA+TH+S  ++G++ C +RLEF+GDAVLD+
Sbjct: 208  IVSTKSEEFIDVESLQTIIGYVFDDSSLLIEALTHSSYNTAGITTCNERLEFLGDAVLDY 267

Query: 1640 LITKHLFFSY-TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            ++T + +  Y     P  LT+LR A+VNN  +A  AVK  LH H+ H SS   + I+D  
Sbjct: 268  ILTDYFYRKYYPKCTPALLTNLRKASVNNWCYAHAAVKAGLHKHILHSSS--KQMIKDLE 325

Query: 1699 KEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
                      G+   G+G    P+ L D+ E+IAGAI++DSG D   VW+  + LL P+ 
Sbjct: 326  SSGPFSGPSHGWEP-GIG---LPEDLADLFEAIAGAIYVDSGNDKEAVWRAMRRLLVPLA 381

Query: 1759 TPETLPMHPVRELQERCQQQ 1778
            TPET+ + PV EL+E C+ +
Sbjct: 382  TPETILLDPVSELKELCEHK 401


>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
 gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
          Length = 1728

 Score =  232 bits (592), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 191/714 (26%), Positives = 331/714 (46%), Gaps = 84/714 (11%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           +AR YQL ++E   K+N I +L TG+GKT +A+L ++    ++ +  ++    A+F+   
Sbjct: 11  EARSYQLRLVEYIVKRNGIIYLPTGSGKTYVAILALKRFSQNMDKSIEEGGQRALFICNT 70

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +R+ T + VG+Y GE G D W   +W  E    QVLV TAQ++LN++  +
Sbjct: 71  VELARQQAICVRKLTNFKVGYYVGEQGTDNWKKNKWDEEIHNHQVLVGTAQVILNLISEN 130

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMS--EFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + + ++++ ILDECHH   KHPY   M   +    +  +K P + G+T   V +KG   
Sbjct: 131 YMSLTSVSIAILDECHHGTGKHPYHEFMKLVQMQMESGIKKLPRIVGLTG--VLIKGNEI 188

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHEQLKQ 535
           + + A ++  LE+     + T+ D KELE    H   P E ++ Y      +   E+++Q
Sbjct: 189 K-EVAKRLKELETTYCGNIITVSDTKELENVMLHSTKPRESIMTYKSEVQTFGKIEEIRQ 247

Query: 536 MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
                         R+ +  +  +D G  + +R   G+  + E +  + +  ++    Y 
Sbjct: 248 ------------RIRNYFYTLELQDIG-HQPVRMSKGMRIQREPNKKSAIKLQINDFLYQ 294

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
           L   G +       S +   +   R    L ++    Y S +     CE V   +  K  
Sbjct: 295 LDNYGIYAGSIAIVSLIVEFEIKRRQAETLSLR--NMYRSAITL---CESVRHMLVSKLR 349

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-- 713
            ++D +              ++ D          D+I    V     TPKVQ  ++ L  
Sbjct: 350 DMLDDD--------------QMSD----------DMINTEEVIMNFSTPKVQLFLQYLKQ 385

Query: 714 -LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSL------SFVKSASLIGHNNS 761
               +  +D   ++FVER      +  L+L  + A  P L       F+   S I H+  
Sbjct: 386 TFANKQPKDICCLVFVERRYTCKCIYGLLLNYI-AATPELRNVLFPQFMVGRSGIFHDFD 444

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
           +  R + ++  I +FRDG   +++ +SV EEG+D++ CN VI  D  KT   Y+Q++GRA
Sbjct: 445 KLERRW-LKSAIQEFRDGEANIMICSSVLEEGIDVQACNYVIILDPIKTFNMYVQTKGRA 503

Query: 822 RKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTDLSHLKDTSRLISVD 876
           R   + ++++   +E+   S         +++  E L+   +ER D   L D +     D
Sbjct: 504 RSKEASFMIISSDLEKQKTSTQILQYRKAHADIGEYLKDRVLERAD-PQLNDINEHFQDD 562

Query: 877 AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYS 935
             P     +  +GAV+  +SA+ L+H YC  +PSD + I+ P F ++E+ E+     +++
Sbjct: 563 IPPF----INGSGAVLLASSALALVHRYCQHMPSDAFGIVLPWFKLLEQEERKAFTKDWA 618

Query: 936 CK----LQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            K    L LP N+   E +        RLA+ +     C KL++MG   +  LP
Sbjct: 619 QKYVVSLTLPLNSALRETIYSDAMPYTRLAKISAAFKTCVKLYQMGELNERFLP 672



 Score =  157 bits (397), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 232/519 (44%), Gaps = 109/519 (21%)

Query: 1355 AQRLPSIM----------RRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYER 1404
            + +LP+IM           RVE  +L   + +    P    + L A+T A   + F  ER
Sbjct: 1159 SNKLPAIMPSSTDNGKPVERVELSVLQHSISNDHITPAEQGEYLAAITYAGSVDVFDMER 1218

Query: 1405 AELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG-LQSYIQADR 1463
             ELLGD +LK   + +L  +YP  +EG LT+++  +VSN  L  Y LS+  +   I +  
Sbjct: 1219 FELLGDCFLKLSATLYLANRYPDWNEGILTQVKSTLVSNRNLL-YCLSETDIPQRICSTL 1277

Query: 1464 FAPS-RWAAPGV-LP-----VFDEDTKDGDSSLFDQEK----SVAEDKLGTDKNYNEYED 1512
            F P   W  P V LP     ++ E+   G ++L         S++E++L  D N  +   
Sbjct: 1278 FTPKYSWLPPSVSLPQNVKALWKENP--GVAALVGPHNLRNLSISEEELFGDGNCGKQSF 1335

Query: 1513 DDMEDGELEGDSSSYRV----------------LSSKTLADVVEALIGVYYVEGGKDAAN 1556
             +  +G  + +  S+                  +  K +AD +EA++GV     G     
Sbjct: 1336 INFVNG-CQANQQSHHAGLDYSSEINFCLGQVQMPDKLIADTLEAILGVVVKNYGLHHGF 1394

Query: 1557 HLMKWIGIQVESDPEEVGCPSRPAC---VPESVLRS-----------VDFHALEDALKIK 1602
             ++++ GI     P+  G P        +  S +R+           ++   LE  L   
Sbjct: 1395 RMLEYFGI---CKPDN-GKPLTQLLDLQLGGSRMRTNISQHEVDGFLINHQYLEKNLGYT 1450

Query: 1603 FKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
            F DR  L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+ ++F   T + PG+LTDLR
Sbjct: 1451 FCDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTRMTPGQLTDLR 1510

Query: 1662 AAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV----------------------- 1698
            +A VNN   A + V+H+ H  +   ++ L   I++FV                       
Sbjct: 1511 SALVNNTTLACICVRHRFHFFILAENALLSESIQNFVQFQETQNHRVTNHVRILMEEKDV 1570

Query: 1699 ---------------------KEVLEELLKPGFNSFGLG-DCKAPKVLGDIVESIAGAIF 1736
                                 K  + E   P    F +  +   PK LGD++E++  A++
Sbjct: 1571 QPEPLDSDEELEMAELAAKQAKPAIREADAPKVGEFNISHNVDVPKALGDVLEALIAAVY 1630

Query: 1737 LDSGRDTSVVWQVFQPLLDP--MVTPETLPMHPVRELQE 1773
            LD  RD +  WQV   L +P  +     +P++P+R+L E
Sbjct: 1631 LDC-RDLNTTWQVVYKLFEPELLEFSRNVPLNPIRQLFE 1668



 Score = 48.5 bits (114), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 15/153 (9%)

Query: 1231 NAGDLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY 1287
            N  D  G IVT   A +  KR  V  +  ++T  S    K       E++     Y+   
Sbjct: 880  NPEDFVGTIVTQWYANYDEKRMLVTKVHTDLTPLSMMEEKHQDKNYYEFT--MSKYRNYI 937

Query: 1288 GVELIFKKQPLIRGRGVSYCKNL-LSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHP 1346
            G +++ K+Q LI  R +S   N  +  R + S + +   +        V L PELCF   
Sbjct: 938  G-DVVHKQQFLIEVRELSDQLNFYVQQRVKSSAQSKARAK--------VMLIPELCFNFG 988

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
             PG L      LPSI+RR+  ML A  L+ +IN
Sbjct: 989  FPGDLWVKLLFLPSILRRLHYMLHAETLRVRIN 1021


>gi|116788280|gb|ABK24820.1| unknown [Picea sitchensis]
          Length = 330

 Score =  231 bits (588), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 188/308 (61%), Gaps = 11/308 (3%)

Query: 1527 YRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESV 1586
            YR++ +K +ADVVEALIG     GG+  A   +KW+G+ ++  P+E+    +   +    
Sbjct: 21   YRMMKTKNVADVVEALIGACLETGGETVALSFVKWLGMDIDI-PQEMPFTRK---LDTGF 76

Query: 1587 LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
            + +V+   LE  LK  F+   L+VE++THAS      S CYQRLEF+GDAVLD+LIT + 
Sbjct: 77   VSNVNVRYLESLLKYSFRVHTLVVESVTHASYKEPSFSGCYQRLEFLGDAVLDYLITLYF 136

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            + +Y  L PG LTDLR+AAVNN+ +A+ AVK  LH  LRH SS L  QI +F K ++   
Sbjct: 137  YKTYPGLSPGLLTDLRSAAVNNDCYAQAAVKCNLHQQLRHASSELHNQITEFAK-LISSS 195

Query: 1706 LKPGFNSFG--LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
               G + FG    +   PKVLGD++ESIAGA+ +DS  DT +VW   +PLL+P+VTP+T+
Sbjct: 196  SASGDHFFGWTTTEVAVPKVLGDLIESIAGAVLVDSEFDTQLVWNAMKPLLEPLVTPKTI 255

Query: 1764 PMHPVRELQERCQQQAEGLEYKASRSGNLAT--VEVYIDG-VQVGVAQNPQKKMAQKLAA 1820
               PVRELQE CQ++     +  S+    +T  VEV + G   +   +   K+ A+KLAA
Sbjct: 256  KYQPVRELQELCQKEFYTCCFDDSQEEGTSTVKVEVRVKGDSYIETCEASNKRTAKKLAA 315

Query: 1821 RNALAVLK 1828
               L  LK
Sbjct: 316  EKVLKSLK 323



 Score = 47.4 bits (111), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC 1396
            +P E+ F   L    V         +R +ES+L       K ++ V  + ++E++T AS 
Sbjct: 62   IPQEMPFTRKLDTGFVSNVN-----VRYLESLL-------KYSFRV-HTLVVESVTHASY 108

Query: 1397 QE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            +E   + CY+R E LGDA L ++++ + +  YP    G LT +R   V+N    Q A+  
Sbjct: 109  KEPSFSGCYQRLEFLGDAVLDYLITLYFYKTYPGLSPGLLTDLRSAAVNNDCYAQAAVKC 168

Query: 1454 GLQ 1456
             L 
Sbjct: 169  NLH 171


>gi|193582606|ref|XP_001943370.1| PREDICTED: endoribonuclease Dcr-1-like [Acyrthosiphon pisum]
          Length = 1626

 Score =  231 bits (588), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 170/496 (34%), Positives = 251/496 (50%), Gaps = 69/496 (13%)

Query: 1365 VESMLLAIQLKDKINY-PVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLF 1422
            +++   +   +  +NY P P+  IL +ALT A+  + +  ER E +GD++LK+ V+ +L+
Sbjct: 1167 LQTETFSFDFQPDLNYHPGPSPSILLQALTTANAIDGYDLERLETIGDSFLKYAVTAYLY 1226

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDED 1481
              +   HEG L+ +R   VSNL LY+    K     + + +F P S W  P  +      
Sbjct: 1227 CTHNNVHEGILSDLRSNHVSNLNLYRLGKLKMFGERMISTKFEPRSNWLPPCYI------ 1280

Query: 1482 TKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEA 1541
               G   L   EK+V    +                      S +  + + K++AD VEA
Sbjct: 1281 ---GPHKL---EKAVINSNI----------------------SITQHITNDKSIADCVEA 1312

Query: 1542 LIGVYYVEGGKDAANHLMKWIGIQVES--DPEEVGCPSRPACVPESVLRSVD-------- 1591
            LIG Y +  G   A   M W+GI V +  D  ++G    P   P  +LR+V+        
Sbjct: 1313 LIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLP---PSPLLRNVNDPEGELTK 1369

Query: 1592 ----FHALEDALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
                F + E  L   F+DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+
Sbjct: 1370 LMDGFESFEQHLGYYFQDRSYLLQAMTHASYYPNCLTDCYQRLEFLGDAVLDYLITRHLY 1429

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV-------K 1699
                  PPG LTDLR+A VNN  FA +AVK+  H +L+H S  L   +  FV        
Sbjct: 1430 EDKRRHPPGALTDLRSALVNNTIFASLAVKNGFHKYLKHLSPGLSEVVYRFVAIQEENGH 1489

Query: 1700 EVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
             + EE    G + F    D +APKVLGDI ES+AGAI+LDS      VW+V+  +++  +
Sbjct: 1490 TIDEEFCFSGEDDFEDAEDVEAPKVLGDIFESVAGAIYLDSNMSLDAVWKVYHKIMENEI 1549

Query: 1759 T--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKM 1814
                + +P+ PVREL E     A+  + +    G      VE+   GV  G+ +N   ++
Sbjct: 1550 KQFSKNVPISPVRELLELEPNTAKFSKPEKLVDGRRVRVIVEILGKGVFKGIGRN--YRI 1607

Query: 1815 AQKLAARNALAVLKEK 1830
            A+  AA+ AL  LKEK
Sbjct: 1608 AKCTAAKCALNHLKEK 1623



 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 164/771 (21%), Positives = 315/771 (40%), Gaps = 96/771 (12%)

Query: 307  YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQ 366
            YQ+++L  AK KN I  LE    K  + + LI+ +   + R+++K     LV       +
Sbjct: 19   YQVEILSSAKNKNVIISLEGITNKVFVILKLIQELAFKMHRKSEKRKWTLLV------LE 72

Query: 367  QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA 426
            +AEV  +Q  + + H       +         +F    V+V T  + L I   + +  + 
Sbjct: 73   EAEV--DQYMFSIRHLTDLKPLEIRSVD--HSDFINYDVIVTTENLCLEIFEKNCLHFDQ 128

Query: 427  INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
            ++L I + C   + ++     +  F  + S+ +   + G+      L      ++  +K 
Sbjct: 129  LSLAIFNNCQKIIVENSTYFKICNFIKSNSQCR---ILGIVHPLFELDSDPLFIENQLKF 185

Query: 487  CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQS 546
              +  KL S + T  D   L +    P EV++E    +  +          + ++   QS
Sbjct: 186  --ISHKLFSSIETASDIVSLLRSCCKPKEVLIECAVQSEDFP--------NIGIKSIVQS 235

Query: 547  -SSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANL-IQKLRAINYALGELGQWCA 604
             +   +   +      G  EELR+     E  +     N+ +Q +   +  L  +G +CA
Sbjct: 236  LTDFLNDHNYNPENIYGDDEELRE-----ELKKIPCPKNVPLQMISEFSDVLKTMGPYCA 290

Query: 605  YKVAQSFLTALQNDERANYQLDVKFQESY-LSKVVSLLQCEL-------------VEGAV 650
             KVA + L  ++N      ++   ++  Y L  +VS L  ++             ++  +
Sbjct: 291  DKVALTLLYRIEN-----LKVKTPYERHYALLCIVSTLLIQIRAKFDNIFYNYSNIDKVL 345

Query: 651  SKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
                 +V+   N   +           L         + D II +  A        +   
Sbjct: 346  KFSSPRVLRIINTLKQFKPKSFNSNNNLAEVCKDQEGNKDKIIKSKSAKRNCKLTRRYYN 405

Query: 711  KILLKYQHT-----EDFRAIIFVERVVAALVLPKVFAELPS-----LSFVKSASLIGHNN 760
            K   K + +     E+  AII V   + A VL  +F +L +       +++   ++ +N 
Sbjct: 406  KTHRKQRQSRDPCEENVCAIILVNSKMTASVLYHLFLDLKNSNEEDFGWIEPQYMVDNNA 465

Query: 761  S--QEMRTFQM----QETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                E   F++    QE I K FR     +L+ T   E G+++ +CN+VI ++L  +  +
Sbjct: 466  DPITEPEEFEIERKTQENILKRFRQRNCNVLIGTKELETGINLPRCNLVINYNLPLSYKS 525

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK----DT 869
            Y+ S+ +AR   + Y+LM +     HAT   +   S   L K+ I +  LSH      D 
Sbjct: 526  YLMSKSKARTLDAYYVLMFDE----HAT---SKILSCCQLYKD-INQMLLSHCTLKDIDM 577

Query: 870  SRLISVDAVPGTVYQV----ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERH 925
             + I  D     V       +   A V + +A+GL++ YC++LPSD ++ L P + ++  
Sbjct: 578  EKEIYADRFNWFVSPFKPGKKEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKIQSI 637

Query: 926  EKPGGPTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                 P  + C ++LP N+P + ++ G       LA++   L  C++++  G   D L P
Sbjct: 638  VYENQPM-FVCSIRLPINSPIKHEIHGHPMPCEILAKRIAALEVCRQIYSQGQLDDTLQP 696

Query: 985  ------------DKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
                        D+   + ++ +      + +PGT + R+ Y +  A+ L 
Sbjct: 697  ITKESFHALFNTDEIIPDTEDSLITCKTKDSMPGTYKRRQHYYKRTAEALN 747



 Score = 68.2 bits (165), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 14/135 (10%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLE-YSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            FYVE I   +  +S FP       P E Y ++ D+Y  KY +++   +QPL+     S  
Sbjct: 932  FYVEEICTHLNPKSPFP------DPTEKYKTFEDFYYHKYSLKIQNLEQPLLDVDPTSAR 985

Query: 1308 KNLLSPRFEH-------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPS 1360
             N L+PR+ +       +     +  +  D ++   L PELC IH  P S+ R A  LPS
Sbjct: 986  LNFLTPRYMNCKGEYLPTSSDATKRAKRYDLSHKQILVPELCNIHLFPASMWRDAVSLPS 1045

Query: 1361 IMRRVESMLLAIQLK 1375
            I+ R+ ++LLA +++
Sbjct: 1046 ILYRINALLLADEIR 1060


>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
          Length = 1495

 Score =  231 bits (588), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 242/902 (26%), Positives = 387/902 (42%), Gaps = 147/902 (16%)

Query: 290  GKKSEAKEKMPEEQA------RPYQLDVLEQAKKKNTIAFLETG--AGKTLIAVLL---- 337
             K SE K++ P  +A      R YQ+++ E AK+KN I  L TG  +GKTLI++LL    
Sbjct: 51   AKDSEKKKRGPFAEASTDITPREYQIELFEAAKEKNLIVVLPTGTGSGKTLISILLLKYY 110

Query: 338  IRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQRW 396
            IR         N + +A FLV KV L  QQ   +++Q  G+ +  + G+      D + W
Sbjct: 111  IRIEVESRALGNPRKVAFFLVEKVALCEQQYRFLKDQIFGHNIVMFTGDNRGVTKDKKYW 170

Query: 397  QREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTS 456
              +F + +V+V TA ILL+ L +  I M+ INLLI DE HHA KKH Y+ ++  +Y++T 
Sbjct: 171  DDQFSSNKVVVCTAHILLDCLNNGFITMDQINLLIFDEAHHAKKKHDYAQIVRRYYYSTE 230

Query: 457  KEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEV 516
            K KRP + GMTASPV+ K      D A     LE  LDS                   E+
Sbjct: 231  KNKRPRILGMTASPVDSKAG----DVAELALELEKTLDS-------------------EI 267

Query: 517  VVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYG-VSE 575
                DK      +  Q    +V VEE         K+  +G  D    +    +   VS 
Sbjct: 268  ATLSDK------MMRQATDFQVHVEETV-------KYNTLGLPDETKTQLWDSISKLVSR 314

Query: 576  RTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLS 635
              E   + +  ++   I      LG WCA +  Q  +   +    A+             
Sbjct: 315  NKEFKASLDFTKEASTI------LGPWCADRYWQVLIDDTEIKRLAD------------- 355

Query: 636  KVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGA 695
                                    +   F  GG   +  G+  +  V    + V      
Sbjct: 356  -----------------------RTRMAFFGGGEKLLARGDQAEEAVREVQKVVAAHEFR 392

Query: 696  AVA--DGKVTPKVQSLIKILLKYQHTEDF-RAIIFVERVVAALVLPKVFAELP-SLSFVK 751
            A++    +++ KV+ L +IL+     ++  R I+FV++   A +L  ++ ++  ++  + 
Sbjct: 393  AISPQSQELSAKVKCLHEILVHAFTVDNTKRCIVFVDQRHTACLLSDLYDQVSMAIPGMN 452

Query: 752  SASLIGHNNSQE----MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
            ++ +IG  +S      M   +   T+  FRDG +  L ATSVAEEG+DI  C++VIRFDL
Sbjct: 453  ASYMIGQQSSSSTLGNMSLRKQCSTLKNFRDGVINCLFATSVAEEGIDIPSCDLVIRFDL 512

Query: 808  AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI----ERTDL 863
              +V+ Y+QS+GRAR   S YI M+E GN+     L+ A      LR+  +    +R   
Sbjct: 513  YTSVIQYVQSKGRARHESSRYITMLEDGNMRQIRSLKQAARDATALREFCLRIPADRKLQ 572

Query: 864  SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME 923
              + D      +  +   VY++ESTGA ++  S++ ++  + + L +   S  + E+   
Sbjct: 573  DDVFDEETESQIKQIRFNVYKIESTGAQLTFPSSLEILARFVASLGTAESSHSKAEY--- 629

Query: 924  RHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             H    G T ++  + LP ++P     G    S  LA+ +     CKKL       D L 
Sbjct: 630  -HVYKVG-TYFTAAVNLPSSSPIVSQTGYPQRSKLLAKCSAAFEVCKKLINGKHIDDHLQ 687

Query: 984  PDKGSGEQQEK-----VDQNDEGE----------PLPGTARHREFYPEGVA-DILQGE-- 1025
            P       + +     +  N +GE           + G   H  F+P  +  D   GE  
Sbjct: 688  PTFKKHFHKMRNARVGISPNKKGEHDMRLRPNVWSIRGEWTH--FFPTRITLDRDCGEKN 745

Query: 1026 --WILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELASLKN 1083
               IL  R    G     LF        NG S    +T  S   +  ++E   E   L  
Sbjct: 746  RSLILLSRSPLPGLPSIPLFF------GNGRSAIVEVT-CSQEPLPITTE---EAGGLTA 795

Query: 1084 FHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDA--W 1141
            F +++ + V   + E     +     YL  P+  D +++ ++ +DWD V  +   D+  W
Sbjct: 796  FTLKIFADVFSKEFEATCDQF----PYLLAPLAKDTNLNEISRIDWDTVNLVRDHDSLEW 851

Query: 1142 TN 1143
             N
Sbjct: 852  EN 853



 Score =  153 bits (386), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 225/529 (42%), Gaps = 93/529 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   +S  +NLL   F+ +EE        ++K  +V L P    + PLP  +V  A
Sbjct: 929  QPVVKAELLSLRRNLLD-EFQVNEE--------INKDCFVILEP--LNVSPLPIDVVSMA 977

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
             + P+I+ R++S L+A+   +  +  +P +  LEA+T  S         Q  F       
Sbjct: 978  LKFPAIIHRIDSALIALDACELFDLSIPPALALEAMTKDSDNTEDHGKQQINFQAGMGSN 1037

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD++LK   +  +F+  P+ +E      R  ++ N  L+  A+   L  YI++
Sbjct: 1038 YERLEFLGDSFLKMATTISIFVLKPKSNECLYHVERMLLICNNNLFNTAVDCKLPEYIRS 1097

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W                                        Y D  +  G+  
Sbjct: 1098 LAFDRRTW----------------------------------------YPDLTLRKGKAF 1117

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV-------- 1573
              ++  R L+ K++ADV EALIG  Y+    D  N  +K +    ++    +        
Sbjct: 1118 KATARQR-LADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYA 1176

Query: 1574 --GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLE 1630
                P      P +  R +    + DA    FK   LL  A TH S   SG V  YQRLE
Sbjct: 1177 SFKVPDWQKASPNANQRRL-VQKVADATGYHFKSAPLLQSAFTHPSYAYSGNVPNYQRLE 1235

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GDA++D  I ++L+ ++    P  LT+ + A  +N+    + VK  LH HL   +S  
Sbjct: 1236 FLGDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQF 1295

Query: 1691 DRQIRDFVKEV----------LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              +IRD+V E+           EE   P    F L     PK   D +E++ GA+F+DS 
Sbjct: 1296 ISKIRDYVAELELAEETARQEAEEDGTPMRMDFWLNATTPPKAYADSIEALMGAMFVDSE 1355

Query: 1741 RDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQAEGLEY 1784
             D SVV   F   + P     +L       HP   L ++ QQ+   +++
Sbjct: 1356 FDYSVVEDFFTKFIFPYFKDMSLYDTFANKHPYTFLTKKMQQEIGCMKF 1404


>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
          Length = 1510

 Score =  229 bits (585), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 237/895 (26%), Positives = 382/895 (42%), Gaps = 154/895 (17%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETG-----------------AGKTLIAVLL----IRSICN 343
            R YQ+++ E AK+KN I  L TG                 +GKTLI++LL    IR    
Sbjct: 72   REYQIELFEAAKEKNLIVVLPTGIFLSLYASTLDILIGTGSGKTLISILLLKHYIRIEVE 131

Query: 344  DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQRWQREFDT 402
                 N + +A FLV KV L  QQ   +++Q  G+    + G+      D + W  +F +
Sbjct: 132  SRALGNPRKVAFFLVEKVALCEQQYRFLKDQIFGHKTVMFTGDNRGVTKDKKYWDDQFAS 191

Query: 403  KQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS 462
             +V+V TA ILL+ L +  I M+ INLLI DE HHA KKH Y+ ++  +Y++T K KRP 
Sbjct: 192  NKVVVCTAHILLDCLNNGFITMDQINLLIFDEAHHAKKKHDYAQIIRRYYYSTDKNKRPR 251

Query: 463  VFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
            + GMTASPV+ K      D A     LE  LDS + T+ D+                   
Sbjct: 252  ILGMTASPVDSKA----GDVAELALELEKTLDSEIATLSDK------------------- 288

Query: 523  AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYG-VSERTESDG 581
                  +  Q    +V VEE  + S+       +G  D    +    +   VS   E   
Sbjct: 289  ------MMRQATDFQVHVEETVKYST-------LGIPDETKTQLWDSISKLVSRNKEFKA 335

Query: 582  AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
            + +  ++   I      LG WCA +  Q  +     D+    +L  + + ++      LL
Sbjct: 336  SLDFTKEASTI------LGPWCADRYWQVLI-----DDTEIKRLADRTRMAFFGGGEKLL 384

Query: 642  -QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG 700
             + +  E AV +    V   E G +   + E+                            
Sbjct: 385  ARGDQAEEAVREVQKVVAAHEFGTISPQSQEL---------------------------- 416

Query: 701  KVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGH 758
              + KV+ L +IL+  +      R I+FV++   A +L  +++++  ++  + ++ +IG 
Sbjct: 417  --SAKVKCLHEILVHAFTIDNTKRCIVFVDQRHTACLLSDLYSQVSMAIPGMNASYMIGQ 474

Query: 759  NNSQE----MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
             +S      M   +   T+  FRDG +  L ATSVAEEG+DI  C++VIRFDL  +V+ Y
Sbjct: 475  QSSSSALGNMSLRKQCSTLKNFRDGMINCLFATSVAEEGIDIPSCDLVIRFDLYTSVIQY 534

Query: 815  IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI----ERTDLSHLKDTS 870
            +QS+GRAR   S YI M+E GN+     L+ A      LR+  +    +R     + D  
Sbjct: 535  VQSKGRARHESSRYITMLEDGNMRQIRSLKQAARDATALREFCLRIPADRKLQDDVFDEE 594

Query: 871  RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
                +  +   VY++ESTGA ++  S++ ++  + + L +   S  + E+    H    G
Sbjct: 595  TEKQIKEIRFNVYKIESTGAQLTFPSSLEILARFVASLGTAENSHSKAEY----HVYKVG 650

Query: 931  PTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE 990
             T ++  + LP ++P     G    S  LA+ +     CKKL       D L P      
Sbjct: 651  -TYFTAAVNLPSSSPIVSQAGYPQRSKLLAKCSAAFEVCKKLINGKHIDDHLQPTFKKHF 709

Query: 991  QQEK-----VDQNDEGE----------PLPGTARHREFYPEGVA-DILQGE----WILSG 1030
             + +     +  N +GE           + G   H  F+P  +  D   GE     IL  
Sbjct: 710  HKMRNARVGISPNKKGEHDMRLRPNVWSIRGEWTH--FFPTRITLDRDDGEKNRPLILLS 767

Query: 1031 RDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELASLKNFHVRLMS 1090
            R    G     LF        NG S    +T   +   + + E D     L  F +++ +
Sbjct: 768  RSPLPGLPSIPLFF------GNGRSAIVEVTCSQEPLPITTEEADG----LTAFTLKIFA 817

Query: 1091 IVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKITKTDA--WTN 1143
             V   + E     +     YL  P+  D +++ ++ +DWD V  +   D+  W N
Sbjct: 818  DVFSKEFEATCDQF----PYLLAPLAKDTNLNEISRIDWDTVNLVRDHDSLEWEN 868



 Score =  150 bits (378), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 227/529 (42%), Gaps = 93/529 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   +S  +NLL   F+ +EE        ++   +V L P    + PLP  +V  A
Sbjct: 944  QPVVKAELLSLRRNLLD-EFQVNEE--------INNDCFVILEP--LNVSPLPIDVVSMA 992

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
             + P+I+ R++S L+A+   +  +  +P +  LEA+T  S         Q  F       
Sbjct: 993  LKFPAIIHRIDSALIALDACELFDLSIPPALALEAMTKDSDNTEDHGKQQINFQAGMGSN 1052

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD++LK   +  +F+  P+ +E      R  ++ N  L+  A+   L  YI++
Sbjct: 1053 YERLEFLGDSFLKMATTISIFVLKPKSNECLYHVERMLLICNNNLFNTAVDCKLPEYIRS 1112

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W                                        Y +  +  G+  
Sbjct: 1113 LAFDRRTW----------------------------------------YPNLTLRKGK-A 1131

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV-------- 1573
              +++ + L+ K++ADV EALIG  Y+    D  N  +K +    ++    +        
Sbjct: 1132 FKTTTRQCLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMAYDEYYA 1191

Query: 1574 --GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSCYQRLE 1630
                P      P +  R +    + DA+   FK   LL  A TH S   SG V  YQRLE
Sbjct: 1192 SFKVPDWQKASPNANQRRL-VQKVADAIGYHFKSAPLLQSAFTHPSYTYSGNVPNYQRLE 1250

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GDA++D  I ++L+ ++    P  LT+ + A  +N+    + VK  LH HL   +S  
Sbjct: 1251 FLGDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQF 1310

Query: 1691 DRQIRDFVK--EVLEELLK--------PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              +IRD+V   E+ EE  +        P    F L     PK   D +E++ GA+F+DS 
Sbjct: 1311 ISKIRDYVAELELAEETARQEAKEDGTPMRMDFWLNATTPPKAYADSIEALIGAMFVDSE 1370

Query: 1741 RDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQAEGLEY 1784
             D SVV   F   + P     +L       HP   L ++ QQ+   +++
Sbjct: 1371 FDYSVVEDFFTKFIFPYFEDMSLYDTFANKHPYTFLTKKMQQEIGCMDF 1419


>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
          Length = 1863

 Score =  229 bits (583), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/489 (33%), Positives = 263/489 (53%), Gaps = 59/489 (12%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  +L+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1358 PSPAI-LLQALTMSNANDGINLERLETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQ 1416

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAED 1499
            +SN+ LY+     G+ S + A +F PS  W APG          +G       EK+V + 
Sbjct: 1417 ISNVNLYRLGKELGIGSLMVATKFEPSDNWLAPGFC------IPEG------LEKAVLDS 1464

Query: 1500 KL-GTDKNYNEYEDDDMEDGELEGDSSSYRVLS-----SKTLADVVEALIGVYYVEGGKD 1553
            K+  +  N ++++D +      EG+   Y +L+      K++AD +EALIG Y V  G+ 
Sbjct: 1465 KIPNSHCNISQFKDGEASG---EGEFVPYSLLTHHSIPDKSIADCLEALIGAYLVSCGRC 1521

Query: 1554 AANHLMKWIGIQVESDPEEVGC-------------PSRPACVPESVLRSVDFH---ALED 1597
                 M W G++V      + C             P  PA   E VLR +  H   + E+
Sbjct: 1522 NTLKCMTWFGLRVLP----LDCEGDAFASLFKKIPPPLPASYDERVLRQL-LHGHVSFEE 1576

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFF-SYTNLPPG 1655
             +  KFK++G L++A THAS   + ++ CYQRLEF+GDAVLD+LIT++L+        PG
Sbjct: 1577 RIGYKFKNKGFLLQAFTHASYHYNTLTDCYQRLEFLGDAVLDYLITRYLYEDPVKQHSPG 1636

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGL 1715
             LTDLR+A VNN  FA +AVK++ H +  + S  L + I  FV        K  F  + L
Sbjct: 1637 ALTDLRSALVNNTFFAALAVKYEFHKYFLNLSPRLFKLIHRFVSTKKHLSGKQYFEKYYL 1696

Query: 1716 G--------DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
            G        + + PK LGDI ES+AGAI+LDSG      W V+  ++ P +    + +P 
Sbjct: 1697 GEDECEEAEEIEVPKALGDIFESVAGAIYLDSGMSLDTTWNVYLAMMKPEIEYFSKHVPK 1756

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             P+REL E   Q A+  + + + +G +   VEV+  G  +G+ +N  K++A+  AA+ AL
Sbjct: 1757 SPIRELLELEPQTAKFEKAELTLNGKIRVKVEVFGKGSFIGIGRN--KRIAKCTAAKRAL 1814

Query: 1825 AVLKEKETA 1833
              +++++++
Sbjct: 1815 RSVEQRKSS 1823



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 77/595 (12%)

Query: 458  EKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVV 517
            +++  V G+T +   L GV S      +I NLE    +      D   L K+ P P E V
Sbjct: 180  DRKLRVVGLTNA---LSGVGSAETARSRIQNLEKYWKAQATVCNDLTVLSKYGPKPEEKV 236

Query: 518  VEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
            +EY    +           +V  +          K+  M  +  G   E+ Q        
Sbjct: 237  LEYGIFYA---------DKDVEYDMVLDLIENNLKFLEMSLKLKGNYSEVIQ-------- 279

Query: 578  ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQND-ERANYQLDVKFQESYLSK 636
                    ++    + Y    LG WCA + AQ FL  +    +   Y  D++  ++ L  
Sbjct: 280  ------EAMRYPMELAYVFLTLGPWCAAEAAQEFLGEVSRSIDNLEYLTDIQISKTTLQI 333

Query: 637  VVSLLQCELVEGAVSKKDAKVVDSENGFVEGG--TNEIEEGELLDSHVVSGGEHVDVIIG 694
            V + LQ  L    +     K   SE   +     TN      L+D+ ++     +  +  
Sbjct: 334  VFTFLQQFLELCRILVDLVKCDPSEANAIHPDKLTN------LMDAILLYTKPKM--VPS 385

Query: 695  AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALV----LPKVFAELPSLSFV 750
                DGK     +S    +  ++       +I V   + ALV    L  V   +PSL+FV
Sbjct: 386  QISEDGK-----KSKPHCVPWHEDPTALCGLIIVRHRITALVVNRWLETVSKTVPSLAFV 440

Query: 751  KSASLIGHN----NSQEMRTFQM---QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVI 803
            KS  +IG      +  E+    +   +E + KFR     LL+ T+  E+ L++  CN+V+
Sbjct: 441  KSNFIIGQTTLDGDDPELVAAGLTRQEEVLQKFRYRDYNLLITTTATEDTLELPHCNLVV 500

Query: 804  RFDLAKTVLAYI--QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT 861
            RFD  ++  +YI  +++ +A    + + +M+ +   +  T L +     E L    +ER 
Sbjct: 501  RFDPPESYKSYIVCKAKAKASSKCARFFIMLSQYETAKFTHLFSDYRKMEGL---LLER- 556

Query: 862  DLSHLKDTSRLISVDAVPGTV---YQVESTGAVV-SLNSAVGLIHFYCSQLPSDRYSILR 917
              SH +D +      A P  +   Y+  S   +V +L++++ +I+ YC +LPSD  + L 
Sbjct: 557  --SHQEDVTTEGDEGASPSDLERCYRPSSGDCLVATLSNSIAIINRYCLRLPSDTLTKLA 614

Query: 918  PEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
            P F + +         Y C L+LP N+P  E++ G   ++  LA+Q V L A ++LH+ G
Sbjct: 615  PVFRINKLPD----DTYQCVLRLPINSPLKEEIVGEPMATPVLAKQDVSLRALERLHKRG 670

Query: 977  AFTDMLLP---DKGSGEQQEKVDQNDE----GEPLPGTARHREFYPEGVADILQG 1024
               D L P   D    + +++V   DE    G   PGT + R++Y + +A   QG
Sbjct: 671  EIDDHLSPFGKDSLKAKTEDQVVPLDETVAHGAARPGTTKRRQYYHKSLAPPFQG 725



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV +I  ++T  S FP          + ++ DYY+ KY + +  K QPL+     S   
Sbjct: 902  FYVANICEQLTPVSEFPATP-------FKTFDDYYRHKYNIGICNKSQPLLDVDHTSARL 954

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR+ +         SEE      E L +     L PELC IHP P SL R    LP
Sbjct: 955  NLLTPRYVNRKGVSLPTSSEESRKAKRENLQQKQ--ILVPELCLIHPFPASLWRKVVCLP 1012

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+  +LLA  ++ +I
Sbjct: 1013 CILYRMNHLLLADSIRMRI 1031


>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
          Length = 1654

 Score =  228 bits (581), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 205/756 (27%), Positives = 354/756 (46%), Gaps = 113/756 (14%)

Query: 279 NGINQECNGKVGKKSEAKEKMPEE-QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           + ++++  G  G   E +E + +E  AR YQ ++L  A + N I +L TG+GKT +A ++
Sbjct: 2   DDLDEDLAGLPGDTKEKEEVINDEFVARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMI 61

Query: 338 IRSICNDLQRQNKK--MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQR 395
           I+    D++++  +    A FLV  V LV QQA  I+ QT + +G Y G+ G D W    
Sbjct: 62  IKHFSADIEKKLSEGGKRAFFLVNTVQLVEQQALSIQHQTTFEIGQYTGQTGCDLWSEDV 121

Query: 396 WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT 455
           W+RE D K V+VMTAQILLN+L H  +K+  I +++ DECH+AVK HP   +M  F   T
Sbjct: 122 WKRELDNKSVIVMTAQILLNLLTHYYLKLSNIRVIVFDECHNAVKDHPMRCIMKFFEGVT 181

Query: 456 --SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDRKEL--EKHV 510
               +++P V G+T S +N     S+V   I+  +LE+   S ++ ++ +   L   ++ 
Sbjct: 182 LVPPDQQPHVVGLTGSLLNSAIDESRVPEYIR--DLEATFQSRIITSVNESMALAIARYS 239

Query: 511 PMPSEVVVEY------------DKAASLWSLHEQLKQMEVAVEEA--AQSSSRRSKWQFM 556
             P +V+V +            D +  L  +   + ++ + VE+    Q  S R      
Sbjct: 240 ADPQQVIVPFSPGNHMLSSLCTDVSEVLDGVMRIIGKLNLKVEDVHIPQKPSSR------ 293

Query: 557 GARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQ 616
               A   EEL+++              L+  +  + Y +  LG +  +K A + +  L+
Sbjct: 294 ----AIQMEELQKL-----------NKKLVNMIVDVKYQMENLGAYGGFKAALAMMILLE 338

Query: 617 NDERANYQLDV-----KFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNE 671
             +R+  QL V      F  +YL+ V  +                            T+ 
Sbjct: 339 RKKRSA-QLQVHANTYHFLITYLTYVRKMF---------------------------TDV 370

Query: 672 IEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERV 731
           I + E        G E + +          V+ KV  L+++L  ++ T+  RA+IFV R 
Sbjct: 371 ISKYE--------GEERIKLF---------VSNKVLKLVELLADFKETD--RALIFVTRR 411

Query: 732 VAALVLPKVFAELPSLSFVKSASLIGHNNS--QEMRTFQMQETIAK-----FRDGRVTLL 784
                L  +  +L  L  VKS  ++G+N++   + R   +++ + K     F  G+   L
Sbjct: 412 FTCKCLQYILEDL-KLPNVKSDFIVGYNSNPFNDTREGLLEKKVNKRVLKSFNKGKKNFL 470

Query: 785 VATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLR 844
           +A+ V EEG+D++ CN+V++F    T+ +YIQS+GRAR   S Y ++ E  N      + 
Sbjct: 471 IASDVLEEGIDVQICNMVVKFAPPTTMRSYIQSKGRARSRISKYYILTETSNSECYRKIS 530

Query: 845 NARNSEETLRKEAI----ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
                E  L+ E +    +RT  +  +    +      P   + +   G  +  ++ + L
Sbjct: 531 KFETLEARLKYELVGKFLDRTLPTQEELNESIFKAQMKP--FFPLGPDGPKIEGSTPISL 588

Query: 901 IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LEGPVCSSMRL 959
           I+ YC+ L  D++S L P +  ER        +    LQLP ++P  + ++     S+ L
Sbjct: 589 INRYCTSLDCDKFSTLSPFWWKERVVTDCHEQKIIVYLQLPNSSPVRQIIKSDAFPSIEL 648

Query: 960 AQQAVCLAACKKLHEMGAFTDMLLP-DKGSGEQQEK 994
           A+++  L ACK L+E     + +LP  K S + Q K
Sbjct: 649 AKRSAALKACKLLYESQELDNNMLPCGKRSQQLQNK 684



 Score =  197 bits (501), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 242/481 (50%), Gaps = 69/481 (14%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V  + +L+ LTAAS  + F  ER E LGD++LK+ VS  LF ++P+  EGQLT ++ +++
Sbjct: 1170 VELADVLQVLTAASAHDIFNLERLETLGDSFLKYSVSLILFTRFPELSEGQLTMIKGKII 1229

Query: 1442 SNLVLYQYALSKGLQSYIQADRF-APSRWAAPG---------------VLPVF---DEDT 1482
             N  L+     K L S I+   F   S W APG               V P +    E T
Sbjct: 1230 GNRNLFYCGEEKELGSIIKTVEFNTESDWVAPGFCVDRTVQRLLRELSVNPRYLYEIELT 1289

Query: 1483 KDGDSS--LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVE 1540
            K+   S  L +  + + E+KL     Y+ +E+D            S +V+S+KT++D VE
Sbjct: 1290 KEERDSGQLSESTRDMIENKL-----YDSWEEDTDYANYSNAHFISQQVVSNKTVSDSVE 1344

Query: 1541 ALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPE--------SVLRSVDF 1592
            AL+G+     G +    +++W+ +   +DP  +    +P    E        S++  ++F
Sbjct: 1345 ALLGLCIKSFGIEKGFEILRWLKV---TDPNLI----KPDAYVEKKVEPTILSMIGDINF 1397

Query: 1593 HA-----LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
            H      LE  +  KFK R  L++A++H + +P++    YQRLEF+GDA+LD LIT H+F
Sbjct: 1398 HIHQPDYLERLINYKFKQRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLITTHIF 1457

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
                NL PG LTDLR+A VNN   A +AV+  LH  L   S  L + I  FV+   +E  
Sbjct: 1458 EHCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSFQLSKVIESFVER--QESR 1515

Query: 1707 KPGFNSFGL----------GDC-KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +  F    L          G+C + PK+LGD+ ES+ GAIFLDS R     W+     + 
Sbjct: 1516 QHEFTDQTLYLINEIDSNVGECIEVPKILGDVFESLVGAIFLDSNRCLKTTWEFIYRFMH 1575

Query: 1756 PMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
              +    + +P + VR L E      E ++ +  +S  L  V+  +  +++ VA N +K+
Sbjct: 1576 KEIEMFSKKVPKNHVRLLYE------ENVQCRFRKSVRLQEVDRVMVVLEIVVA-NEEKR 1628

Query: 1814 M 1814
             
Sbjct: 1629 F 1629



 Score = 43.9 bits (102), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 1259 TAESSFPRKEGYLGPLEYSSYADYYKQKYG-VELIFK-KQPLIRGRGVSYCKNLLSPRFE 1316
            TA S FP  E       Y +Y +Y+  KY  VE ++   +PL+  R +S   N L PR  
Sbjct: 922  TALSDFPSGE-------YPTYENYFVTKYANVEQLYSAHKPLLEVRALSKKLNCLRPR-- 972

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD 1376
               +   + ++  ++ +   L PELC    +P +    +  LPS + R+  +LLA +L+ 
Sbjct: 973  QIVQATSKRKKKQEEEFEESLVPELCIRSNVPAAYWLKSTLLPSCVHRITYLLLADELRV 1032

Query: 1377 KI 1378
            KI
Sbjct: 1033 KI 1034


>gi|212723814|ref|NP_001131630.1| uncharacterized protein LOC100192986 [Zea mays]
 gi|194692090|gb|ACF80129.1| unknown [Zea mays]
          Length = 365

 Score =  227 bits (579), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/412 (35%), Positives = 210/412 (50%), Gaps = 57/412 (13%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LT+M++ ++SN  L Q A S  L  YI+++ F P  W  PGV                  
Sbjct: 2    LTKMKKNVISNAALCQLACSNNLVGYIRSEAFNPKTWIVPGV------------------ 43

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
                          Y      D+ D  L       R L SK +AD VEALIG Y    G+
Sbjct: 44   -------------GY------DICDRSL-------RKLKSKRIADSVEALIGAYLSTAGE 77

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
             AA   +K +G+ +E     +        +       ++  +LE  L   F D  LL+EA
Sbjct: 78   QAAYIFLKSLGMDIEFHKMPI-----ERVITIKAEEFINVKSLELLLDYSFNDPSLLMEA 132

Query: 1613 ITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
            +TH S   +G + CYQRLEF+GDAVLDH+ T + +  Y    P  LTDLR+A+VNN  +A
Sbjct: 133  LTHGSYQIAGTTPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYA 192

Query: 1672 RVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGL-GDCKAPKVLGDIVES 1730
              AVK  LH H+ H SSAL +++ D++ +  +    P   S G       PKVLGD+VES
Sbjct: 193  HAAVKAGLHKHVLHSSSALHKRMADYLDKFEQSFSGP---SHGWEAGISLPKVLGDVVES 249

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSG 1790
            IAGAI++D+  D  VVW+  + +L+P+VTP+TL   PV+ELQE C  +   LEY  +R  
Sbjct: 250  IAGAIYIDAKHDKGVVWRSMKRILEPLVTPDTLQNDPVKELQEFCDSKGYTLEYTVTRDN 309

Query: 1791 NLATV--EVYIDGVQVGVAQNPQKKM-AQKLAARNALAVLKEKETAEAKEKG 1839
             +++V  EV  +G      +    K+ A+KLAA + L  LK  +T +    G
Sbjct: 310  GVSSVVAEVRTEGTTYKATRTGFSKLDAKKLAASSVLRDLKAADTKQYSANG 361



 Score = 47.8 bits (112), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 1385 SKILEALTAASCQ---ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S ++EALT  S Q    T CY+R E LGDA L  + + + + +YP+     LT +R   V
Sbjct: 127  SLLMEALTHGSYQIAGTTPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASV 186

Query: 1442 SNLVLYQYALSKGLQSYI 1459
            +N      A+  GL  ++
Sbjct: 187  NNSCYAHAAVKAGLHKHV 204


>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease DCL1; Includes: RecName:
           Full=ATP-dependent helicase DCL1
          Length = 1607

 Score =  227 bits (579), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 217/694 (31%), Positives = 325/694 (46%), Gaps = 120/694 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNKKM---LAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIA LL+R +I N+L+ ++K++   +A FLV K
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+     Y +  +CG+M +D      W + FD    +V TA+IL   L HS
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDV-TQDFWHKTFDENMAIVCTAEILYQCLTHS 254

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVF-GMTASPVNLKGVSS 478
            I+M+ +NLL+ DE HH  K HPY+ ++ +FY       KR  +   MTASPV+     +
Sbjct: 255 YIRMDQVNLLVFDEAHHTKKNHPYARIIKDFYAEVKDLNKRLRISRAMTASPVD-----A 309

Query: 479 QVDCAI-KICNLESKLDSVVCTIKDRKELEK-HVPMPSEVVVEYDKAASLWSLHEQLKQM 536
           Q+D  I +   LE  L S + T+ D   L      +  EV VEY K          L + 
Sbjct: 310 QIDPKIARSPELEGLLHSQIATVADPTALHNSSTKLKREVTVEYGKC---------LPEF 360

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN-YA 595
           E  +  A +                                +  G   L QK  A    A
Sbjct: 361 ETGLNRALK--------------------------------DLVGEHRLFQKPFAFTATA 388

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
             ELG WCA +  Q F    +       +L+ K +   L K            A S++ A
Sbjct: 389 ASELGPWCADRYWQLFFRGEE-----VVKLEAKTEREILRK-----------SAYSQEIA 432

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
             V           N++ E   L       G+H      A+ +   ++ KV  L++IL  
Sbjct: 433 AQV-----------NKVREAHRL------VGQHE----FASPSSDLLSSKVVILLRILRG 471

Query: 716 YQHTEDF--RAIIFV-ERVVAAL---VLPKVFAELPSLSFVKSASLIG-------HNNSQ 762
                D   R I+FV +R VA+L   +L +    +P L   +   L+G       ++N++
Sbjct: 472 EFRGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGL---EPGILVGGGRPEASYDNAK 528

Query: 763 EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
                Q+  TI KF+ G +  + ATSVAEEGLDI  CNV+IR+DL  T++ YIQSRGRAR
Sbjct: 529 VTYRDQVL-TIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYIQSRGRAR 587

Query: 823 KPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--ERTDLSHLKDTSRLISVDAV 878
           + GS YI M+E  N  H   +   + SE+ LRK  EA+  +R    +  D    +  +  
Sbjct: 588 QEGSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNNFDMEYFLRKEK- 646

Query: 879 PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
               Y V  TGA ++   ++  +  + + LP      L   +++     PGG   Y C++
Sbjct: 647 DQRQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLV--LSVPGG---YQCEV 701

Query: 939 QLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
            LP ++P     G V +S  +A+ +     C  L
Sbjct: 702 TLPESSPIRSATGKVYASKAVAKCSAAYEMCLML 735



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 230/584 (39%), Gaps = 123/584 (21%)

Query: 1337 LPPELCFI-------HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILE 1389
            L P+ CFI        PLP  LV  A   P+IM R++S L+A++    +N  V     LE
Sbjct: 1024 LEPKPCFIVLEPLRISPLPVDLVAMAYNFPAIMHRIDSNLVALEACKMLNLNVRPDLALE 1083

Query: 1390 ALTAASC--------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
            A T  S         Q +F       YER E LGD +LK   +  +F   P K E +   
Sbjct: 1084 AFTKDSDNSGEHDAEQISFQSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHV 1143

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKS 1495
             R  ++ N  L+  AL   L+ +I++  F    W   G+                     
Sbjct: 1144 ERMLLICNRNLFNNALEVKLEEHIRSMAFDRRSWYPEGL--------------------- 1182

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA 1555
                               ++ G+   D +   VL+ KT+ADV EALIG  Y+   +   
Sbjct: 1183 ------------------TLKKGK-RKDLTRQHVLADKTIADVCEALIGAAYLTAQEQTP 1223

Query: 1556 NHL---MKWIGIQVE---------SDPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIK 1602
             +    ++ + + V+         SD      P      P +  + +D  A  E  +   
Sbjct: 1224 PNFDLAIRAVTVMVKDKNHTMTSYSDYYAAYSPPAWQTAPCNSTQ-LDMAARFEARMGYA 1282

Query: 1603 FKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            F    LL  A  H + PS    +  YQRLEF+GDA+LD    + LF  +    P  LT+ 
Sbjct: 1283 FTHPRLLRSAFQHPTYPSVYEKLPSYQRLEFLGDALLDMASVEFLFHRFPGADPQWLTEH 1342

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK------------- 1707
            + A V+N+    +AV    H  + + +SA+ ++I ++V E+ + L               
Sbjct: 1343 KMAMVSNQFLGCLAVYLGFHRAISYCASAIQKEITEYVTEIEDALQSARDDASKTPCNRH 1402

Query: 1708 -----PG-------FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF----Q 1751
                 PG          F +   + PK L D+VE+  GA+F+DS  D + V   F    +
Sbjct: 1403 ATTPSPGDLPAESFARDFWVRCSRPPKCLPDVVEAYVGAVFVDSRYDFARVRAFFADHVR 1462

Query: 1752 PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYK-----------ASRSGNLATVEVY- 1798
            P  + M   +     HPV  L    Q +    E++           A     L T +V  
Sbjct: 1463 PFFEDMRLYDAFANKHPVTFLAGIMQGRMRCAEWRLLVKDLPPVVGAGAGTELETPQVVC 1522

Query: 1799 ---IDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKG 1839
               + G+ +  A     +  +  AA+ A+ VL E   AEA  K 
Sbjct: 1523 AVRVHGLTLAHAVAASGRYGKIAAAKKAIQVL-EGMDAEAFRKA 1565


>gi|356518185|ref|XP_003527762.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 455

 Score =  227 bits (578), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/303 (44%), Positives = 183/303 (60%), Gaps = 22/303 (7%)

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE----SDPEEVGCPSRPACVP-ESVL 1587
            KT+AD VEALIG YYV+GG  A+ ++MKW+GI VE    S  E +   S   CVP ES  
Sbjct: 126  KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLDEAITAASLSTCVPIES-- 183

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITKHLF 1646
               D  +LE  ++ +F  +GLL+EAITH S    G+ C Y+RL+F+GD+VLD LIT HL+
Sbjct: 184  ---DIASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLDLLITWHLY 240

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
             S+T++ PG L DLR+A+VNN+NFA+VAV+H LH HL H S  L  QI ++VK + E   
Sbjct: 241  QSHTDIDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYVKVISES-- 298

Query: 1707 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMH 1766
                +   L   +APK LGD+VESI G I + +      VW VF PLL P+VTP+ L + 
Sbjct: 299  ----DPRSLPSIRAPKALGDVVESIVGPILIGTKLSLDQVWNVFYPLLSPIVTPDKLELP 354

Query: 1767 PVRELQERCQQQAEGLEYK--ASRSGNLATVEVYI---DGVQVGVAQNPQKKMAQKLAAR 1821
            P REL E C      ++ K    + G+   VEV +   + + V   + P KK A+  AA 
Sbjct: 355  PFRELNELCDSLGHFVKVKENCEKMGSAMHVEVSVQLPNALLVREGKGPNKKTAKGEAAF 414

Query: 1822 NAL 1824
            + L
Sbjct: 415  HLL 417



 Score = 47.8 bits (112), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 5/54 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           R YQ++V E A+++NTIA L+TG+GKTL AV+L++      Q +N K L  F V
Sbjct: 47  RGYQIEVYEVARRRNTIAVLDTGSGKTLNAVMLMKE-----QFKNMKFLTDFQV 95


>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
          Length = 1865

 Score =  226 bits (577), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 165/490 (33%), Positives = 257/490 (52%), Gaps = 45/490 (9%)

Query: 1378 INYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            + +P P+  +L +ALT ++  +    ER E +GD++LK+ ++ +L+ KY   HEG+L+ +
Sbjct: 1375 VEHPGPSPNVLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHL 1434

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQE- 1493
            R + VSNL LY+    KGL  Y+ A +F P   W  P   +P      K+ + +L D + 
Sbjct: 1435 RSKQVSNLNLYRLGRRKGLGEYMIATKFDPHDNWLPPCFYVP------KELEEALIDAQF 1488

Query: 1494 ----KSVAEDKLGTDKNYNEYEDDDMEDGE-------LEGDSSSYRVLSSKTLADVVEAL 1542
                 +VA+     D   ++      + GE       +  +  +   +  K++AD VEAL
Sbjct: 1489 PANCWTVADMAATRDMTLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEAL 1548

Query: 1543 IGVYYVEGGKDAANHLMKWIGIQVESDPE-----EVGCPSRPA----CVPESVLRSV--D 1591
            IG Y +E G   A   M W+GI+V    E     E+  P  P       P   L  +   
Sbjct: 1549 IGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDG 1608

Query: 1592 FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            +   E  +  KF+DR  L++A+THAS  P++   CYQRLEF+GDAVLD+LIT+HL+    
Sbjct: 1609 YDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTR 1668

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK------EVLEE 1704
               PG LTDLR+A VNN  FA +AV++  H + R+ S +L+  +  FV+        L +
Sbjct: 1669 MHSPGALTDLRSALVNNTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVD 1728

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
             L     +  + D + PK LGD+ ES+AGAIFLDSG     VW+V+  ++   +      
Sbjct: 1729 ELYLVVETEEVEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNK 1788

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAA 1820
            +P  P+REL E   + A+  + +    G     TVEV+  GV  G+ +N   ++A+  AA
Sbjct: 1789 VPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGVFKGIGRN--YRIAKCTAA 1846

Query: 1821 RNALAVLKEK 1830
            + AL  LK++
Sbjct: 1847 KCALKNLKKR 1856



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 175/752 (23%), Positives = 313/752 (41%), Gaps = 83/752 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-RQNKKMLAVFLVPKVPL 363
            R YQ+++L+ AKK+NTI      + K  I + L++   + ++    K+ L V   P VP+
Sbjct: 17   REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPNVPI 76

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +    +++ + T   +            D +          V+V TA++ + + + + + 
Sbjct: 77   MTSHVKLLTDLTVTSI------------DKEENPPSLKASNVIVTTAEVCVLLCKKNFVH 124

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD-C 482
            +++  L+++D C +  ++     +M+ +     +  RP + G+TA    L G   Q D  
Sbjct: 125  LDSYALIVID-CLYGGQQSLVREIMARY--QAIQAPRPRILGLTAG---LLGSEMQPDRL 178

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              ++  LE  L S V T  +   L +    P E +VE  K      L +++K    A   
Sbjct: 179  EAELQRLEKLLSSSVDTSSEILTLIRLSCRPRERIVECFKPIP-SPLQDKIK----ATIT 233

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            + Q   +  ++      D    EE +QV    E+  S            I   L +LG W
Sbjct: 234  SCQDFLKDHRYDPSEIYDDDLLEEFKQVPDPKEQPLS-----FFDDFLEI---LDDLGPW 285

Query: 603  CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
             A + A   L  ++       ++ V ++  YL   V+      +      +     D E 
Sbjct: 286  SADRAAYGMLIKIEK-----LKVKVPYERHYLLLCVASSVLVSIRALCELEFQDYTDKEK 340

Query: 663  GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK---ILLKYQHT 719
             F       +   ++L     +G +         + D K              + + Q  
Sbjct: 341  VFRFSTPKVLRFLQVLKQFKPTGDKPETCDKLPDLKDPKKGKGKNYKGPRRPYISRAQSD 400

Query: 720  EDFRAIIFVERVVAALVLPKVFAELP-----------SLSFVKSASLIGHNNSQEMRTFQ 768
            E   A++FV+    A  L  +   +            S S  K A  +      E    +
Sbjct: 401  EMLCALVFVKNRYKAEALFALLCVMSKSDEEYWWVSVSFSVNKIADPVREPREAESEHKR 460

Query: 769  MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
             +E + K+R     +++ATS  E+G D+ +CN+VIRFDL ++  +YI S+ RAR   + +
Sbjct: 461  QEEVLRKYRSHECNIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEAHF 520

Query: 829  ILMIERGNLSHATFLRNA---RNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ- 884
            +L+     +S   F+ N       E TL K       L   K+   +    ++    YQ 
Sbjct: 521  LLLANENEVSD--FVENLAEYNEVENTLLKRCY---SLEPDKNEELVADASSLQCRPYQP 575

Query: 885  -VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
              E     VSL++A+ L++ YC++LPSD ++ L P +  E+ E       Y C ++LP N
Sbjct: 576  SAEPGANSVSLSNAIALVNRYCAKLPSDTFTRLTPIWHEEKVE-----NGYICSIRLPIN 630

Query: 944  APFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEG- 1001
            +P +K +  P   +  LA++A     C+ LH+ G   D L P    G++  KV++ D   
Sbjct: 631  SPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQP---IGKENFKVNEEDWNS 687

Query: 1002 -----------EPLPGTARHREFYPEGVADIL 1022
                       +P PGT + R++Y + VAD L
Sbjct: 688  SALEESDEENLDPRPGTTKRRQYYYKKVADAL 719



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +   S FP  +       Y+++ +YY +KY +++  K Q L+     S   
Sbjct: 902  FYVAEICSNLNPASDFPGSD-------YATFEEYYLRKYSIQIQNKSQHLLDVDHTSARL 954

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SE  +    E L++     L PELC IHP   SL R A  LP
Sbjct: 955  NFLTPRYVNRKGVALPTSSEATKRAKREKLEQKQ--ILVPELCAIHPFSASLWRKAVCLP 1012

Query: 1360 SIMRRVESMLLAIQLKDKINYPVPASKI 1387
             I+ R+ ++LLA Q++  +   +   KI
Sbjct: 1013 CILYRINALLLADQIRRTVALELNLGKI 1040


>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
          Length = 1835

 Score =  226 bits (577), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 165/490 (33%), Positives = 257/490 (52%), Gaps = 45/490 (9%)

Query: 1378 INYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            + +P P+  +L +ALT ++  +    ER E +GD++LK+ ++ +L+ KY   HEG+L+ +
Sbjct: 1345 VEHPGPSPNVLLQALTMSNANDGINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHL 1404

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQE- 1493
            R + VSNL LY+    KGL  Y+ A +F P   W  P   +P      K+ + +L D + 
Sbjct: 1405 RSKQVSNLNLYRLGRRKGLGEYMIATKFDPHDNWLPPCFYVP------KELEEALIDAQF 1458

Query: 1494 ----KSVAEDKLGTDKNYNEYEDDDMEDGE-------LEGDSSSYRVLSSKTLADVVEAL 1542
                 +VA+     D   ++      + GE       +  +  +   +  K++AD VEAL
Sbjct: 1459 PANCWTVADMAATRDMTLDDICSMVRQRGESLSLSNIIPYNLVTQHSIPDKSIADCVEAL 1518

Query: 1543 IGVYYVEGGKDAANHLMKWIGIQVESDPE-----EVGCPSRPA----CVPESVLRSV--D 1591
            IG Y +E G   A   M W+GI+V    E     E+  P  P       P   L  +   
Sbjct: 1519 IGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLLDG 1578

Query: 1592 FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            +   E  +  KF+DR  L++A+THAS  P++   CYQRLEF+GDAVLD+LIT+HL+    
Sbjct: 1579 YDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTR 1638

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK------EVLEE 1704
               PG LTDLR+A VNN  FA +AV++  H + R+ S +L+  +  FV+        L +
Sbjct: 1639 MHSPGALTDLRSALVNNTIFASLAVRNGFHRYFRNLSPSLNEVVEKFVRLQEDSGHTLVD 1698

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
             L     +  + D + PK LGD+ ES+AGAIFLDSG     VW+V+  ++   +      
Sbjct: 1699 ELYLVVETEEVEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWKVYYNMMKSEIEQFSNK 1758

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAA 1820
            +P  P+REL E   + A+  + +    G     TVEV+  GV  G+ +N   ++A+  AA
Sbjct: 1759 VPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGVFKGIGRN--YRIAKCTAA 1816

Query: 1821 RNALAVLKEK 1830
            + AL  LK++
Sbjct: 1817 KCALKNLKKR 1826



 Score =  145 bits (367), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 175/752 (23%), Positives = 313/752 (41%), Gaps = 83/752 (11%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-RQNKKMLAVFLVPKVPL 363
            R YQ+++L+ AKK+NTI      + K  I + L++   + ++    K+ L V   P VP+
Sbjct: 17   REYQVELLDSAKKRNTIVCSSASSAKAFITIKLLQEFSHKMRVPHGKQALFVLDGPNVPI 76

Query: 364  VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +    +++ + T   +            D +          V+V TA++ + + + + + 
Sbjct: 77   MTSHVKLLTDLTVTSI------------DKEENPPSLKASNVIVTTAEVCVLLCKKNFVH 124

Query: 424  MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD-C 482
            +++  L+++D C +  ++     +M+ +     +  RP + G+TA    L G   Q D  
Sbjct: 125  LDSYALIVID-CLYGGQQSLVREIMARY--QAIQAPRPRILGLTAG---LLGSEMQPDRL 178

Query: 483  AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              ++  LE  L S V T  +   L +    P E +VE  K      L +++K    A   
Sbjct: 179  EAELQRLEKLLSSSVDTSSEILTLIRLSCRPRERIVECFKPIPS-PLQDKIK----ATIT 233

Query: 543  AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            + Q   +  ++      D    EE +QV    E+  S            I   L +LG W
Sbjct: 234  SCQDFLKDHRYDPSEIYDDDLLEEFKQVPDPKEQPLS-----FFDDFLEI---LDDLGPW 285

Query: 603  CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
             A + A   L  ++       ++ V ++  YL   V+      +      +     D E 
Sbjct: 286  SADRAAYGMLIKIEK-----LKVKVPYERHYLLLCVASSVLVSIRALCELEFQDYTDKEK 340

Query: 663  GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK---ILLKYQHT 719
             F       +   ++L     +G +         + D K              + + Q  
Sbjct: 341  VFRFSTPKVLRFLQVLKQFKPTGDKPETCDKLPDLKDPKKGKGKNYKGPRRPYISRAQSD 400

Query: 720  EDFRAIIFVERVVAALVLPKVFAELP-----------SLSFVKSASLIGHNNSQEMRTFQ 768
            E   A++FV+    A  L  +   +            S S  K A  +      E    +
Sbjct: 401  EMLCALVFVKNRYKAEALFALLCVMSKSDEEYWWVSVSFSVNKIADPVREPREAESEHKR 460

Query: 769  MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
             +E + K+R     +++ATS  E+G D+ +CN+VIRFDL ++  +YI S+ RAR   + +
Sbjct: 461  QEEVLRKYRSHECNIMIATSALEQGCDLPKCNLVIRFDLPQSFHSYIHSKARARANEAHF 520

Query: 829  ILMIERGNLSHATFLRNA---RNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ- 884
            +L+     +S   F+ N       E TL K       L   K+   +    ++    YQ 
Sbjct: 521  LLLANENEVSD--FVENLAEYNEVENTLLKRCYS---LEPDKNEELVADASSLQCRPYQP 575

Query: 885  -VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
              E     VSL++A+ L++ YC++LPSD ++ L P +  E+ E       Y C ++LP N
Sbjct: 576  SAEPGANSVSLSNAIALVNRYCAKLPSDTFTRLTPIWHEEKVE-----NGYICSIRLPIN 630

Query: 944  APFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEG- 1001
            +P +K +  P   +  LA++A     C+ LH+ G   D L P    G++  KV++ D   
Sbjct: 631  SPVKKTVTSPPMINTLLARRAAAFMICQLLHKAGELDDNLQP---IGKENFKVNEEDWNS 687

Query: 1002 -----------EPLPGTARHREFYPEGVADIL 1022
                       +P PGT + R++Y + VAD L
Sbjct: 688  SALEESDEENLDPRPGTTKRRQYYYKKVADAL 719



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +   S FP  +       Y+++ +YY +KY +++  K Q L+     S   
Sbjct: 902  FYVAEICSNLNPASDFPGSD-------YATFEEYYLRKYSIQIQNKSQHLLDVDHTSARL 954

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SE  +    E L++     L PELC IHP   SL R A  LP
Sbjct: 955  NFLTPRYVNRKGVALPTSSEATKRAKREKLEQKQ--ILVPELCAIHPFSASLWRKAVCLP 1012

Query: 1360 SIMRRVESMLLAIQLKDKINYPVPASKI 1387
             I+ R+ ++LLA Q++  +   +   KI
Sbjct: 1013 CILYRINALLLADQIRRTVALELNLGKI 1040


>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
          Length = 1239

 Score =  226 bits (577), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 265/577 (45%), Gaps = 83/577 (14%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFP-----RKEGYLGPLEYSSYADYYKQKYGVELIF 1293
            I+  +    R+ +  +RY+M  +S+ P     R+ GY       ++ DYY+   G + + 
Sbjct: 640  IIDNSDYSLRYLITDVRYDMNPQSAVPSGFDIREAGY------PTFIDYYRD-LGDKFVI 692

Query: 1294 K--KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
               +QP+I    +    + L P        +G       +T+ V   P+ C  + +  S+
Sbjct: 693  HDYEQPMIEVERLKRGMDFLHPGGNMPARSKGPA-----RTWVV---PQFCTQYFVNASV 744

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDA 1411
                  +PSIM R++S+LL    + + + P+    +LEA T  S      YER E LGD+
Sbjct: 745  YIAMLMIPSIMTRIDSLLLCYDSRARYDLPITDEYMLEAYTMPSASMEMDYERLETLGDS 804

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
             LK++ +  L++ +P  +EG+L  +R ++V N  LY+ A       Y+ +  F    W  
Sbjct: 805  LLKFIATIRLYINFPFSNEGELHHLRIRVVCNRALYRAAKRLKFYRYVTSQAFNRRHWRP 864

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
            P         T   D++  D  +S+ + KL                             S
Sbjct: 865  PHF-------TSTADNA--DTMESLKKHKL-----------------------------S 886

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANH-----------LMKWIGIQVESDPEEVGCPSRPA 1580
             KTLAD+VEA +G  Y+  G +   H           + KW    V  +      P R  
Sbjct: 887  DKTLADIVEASLGAAYLSSGLEGCLHTAIQMQIPFDQIEKWSDFNVAFEESRKAVPPRAE 946

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHL 1640
                  LR +D   ++  +  +F    L+VEA+THAS P+S   CYQRLEF+GDA+LD L
Sbjct: 947  V---KALRMLDLPKIQVLVDREFNKPLLVVEALTHASLPNSTSPCYQRLEFLGDAILDFL 1003

Query: 1641 ITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE 1700
            + ++L+  Y +  PG++T L+ + VNN     + + + LH H+ H S  L R I    +E
Sbjct: 1004 VIRYLYTKYPDAEPGQITTLKDSCVNNHVLGIICLNNGLHKHIIHYSGKLVRAINTLEEE 1063

Query: 1701 VLEELLKPGFNSFG--LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ----PLL 1754
            V E  LK    + G    D   PKVL D+VES+ GA+F+D+  D S    +F     P+ 
Sbjct: 1064 VQE--LKDTGKAVGEYWADMNIPKVLSDVVESMLGAVFVDAKFDLSPCAALFDKWFVPIF 1121

Query: 1755 DPMVTPETLPMHPVRELQERCQQ-QAEGLEYKASRSG 1790
            D  VTPE + +HP+R+L    Q    EG   +   +G
Sbjct: 1122 DANVTPELVRIHPMRKLLTDLQAFGCEGFMLRNHSTG 1158



 Score =  183 bits (465), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 132/360 (36%), Positives = 177/360 (49%), Gaps = 31/360 (8%)

Query: 673  EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERV 731
            E  EL+D+       +VD I          +PK+  LI++L     +   F  IIFVER 
Sbjct: 30   ETHELIDTIECPRNPNVDDI-------QTFSPKIAKLIQLLGFIVNNMGQFCGIIFVERR 82

Query: 732  VAALVLPKVFAELPSLSFVKSASLIGHNNSQE---MRTFQMQ-ETIAKFRDGRVTLLVAT 787
              A+ L K+   L +L  +K   LIGH  + E     TF+ Q + I KFR G +  L+AT
Sbjct: 83   HTAIALQKLIESLDTLDKIKCGILIGHGTADEGDVQMTFKEQNKVIQKFRSGELNFLIAT 142

Query: 788  SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR 847
            +VAEEGLDI+ CN VIRFD   T++AYIQSRGRAR   S Y++MIE  NL+    L   R
Sbjct: 143  NVAEEGLDIQPCNFVIRFDFFHTLIAYIQSRGRARCIDSKYVIMIEDNNLNQIGTLDEFR 202

Query: 848  NSEETLR---------KEAIERTDLS---HLKDTSRLISVDAVPGTVYQVESTGAVVSLN 895
              EE ++         +    R  LS   +  D       D +   +  ++ TGA ++  
Sbjct: 203  MLEEAMKSFCQALPAERNVANRFSLSMEGYESDNEYDSDEDYLESAIIDMD-TGATITKQ 261

Query: 896  SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS 955
            +AV LIH YCS LPSD + +L+P F     E       Y C L LP NA  +K+E P   
Sbjct: 262  NAVPLIHRYCSSLPSDSFCVLKPIF-----EHIAAGEGYKCILTLPSNAAIQKVESPFVR 316

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE-QQEKVDQNDEGEPLPGTARHREFY 1014
            S  LA+  V L AC +L  + A    LLP     E   E   Q DE   + G+ R    Y
Sbjct: 317  SKDLAKALVALQACSELKRLDALDRHLLPRNIKKEILGEMAPQYDENGYIIGSRRRHGLY 376


>gi|357431158|gb|AET78256.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  225 bits (573), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 126/151 (83%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             AANHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAANHLMKWIGIHVEDDPDEVDGTVKNVNVP 146


>gi|357431160|gb|AET78257.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431162|gb|AET78258.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431164|gb|AET78259.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431166|gb|AET78260.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431168|gb|AET78261.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431170|gb|AET78262.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431172|gb|AET78263.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431174|gb|AET78264.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431176|gb|AET78265.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431178|gb|AET78266.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431180|gb|AET78267.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431182|gb|AET78268.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431184|gb|AET78269.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431186|gb|AET78270.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431188|gb|AET78271.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431190|gb|AET78272.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431192|gb|AET78273.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431198|gb|AET78276.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431200|gb|AET78277.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431204|gb|AET78279.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431206|gb|AET78280.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431208|gb|AET78281.1| At1g01040-like protein [Arabidopsis halleri]
 gi|357431210|gb|AET78282.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  224 bits (572), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 126/151 (83%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             AANHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAANHLMKWIGIHVEDDPDEVEGTVKNVNVP 146


>gi|357431156|gb|AET78255.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  224 bits (571), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/151 (74%), Positives = 126/151 (83%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVFDEDTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             AANHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAANHLMKWIGIHVEDDPDEVEGXVKNVNVP 146


>gi|15150411|gb|AAK84929.1| SD01621p [Drosophila melanogaster]
          Length = 865

 Score =  224 bits (571), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 169/537 (31%), Positives = 257/537 (47%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 330  DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 389

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 390  HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 449

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 450  WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 503

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
              Y ++S      K++AD VEALIG Y +E G   A   M W+G++V     ++   ++ 
Sbjct: 504  IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 563

Query: 1580 ACVPESVLRSVD---------------------------------FHALEDALKIKFKDR 1606
              +P S   + +                                 F   E++L  KF+DR
Sbjct: 564  QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 623

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 624  SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 683

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 684  NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAED 743

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 744  VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 803

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 804  PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 858


>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
 gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
          Length = 2249

 Score =  224 bits (570), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 169/537 (31%), Positives = 258/537 (48%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1714 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1773

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1774 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1833

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N        +++G+L+  + S       
Sbjct: 1834 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGVQNGQLDDSNDSCNDFSCF 1887

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
              Y ++S      K++AD VEALIG Y +E G   A   M W+G++V     ++   ++ 
Sbjct: 1888 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDAGNQE 1947

Query: 1580 ACVPESVLRSVD---------------------------------FHALEDALKIKFKDR 1606
              +P S   + +                                 F   E++L  KF+DR
Sbjct: 1948 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 2007

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAED 2127

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 2128 VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 2187

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2188 PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2242



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 816  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 874

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 875  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 934

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 935  EQIVQLSD--EPRPGTTKRRQYYYKRIA 960



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1149 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNASQPLLDVDHTSARL 1201

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1202 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1259

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1260 CILYRINGLLLADDIRKQVS 1279



 Score = 65.9 bits (159), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         EM   + +E 
Sbjct: 495 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAEMEHRRQEEV 554

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 555 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 614



 Score = 43.1 bits (100), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 57/323 (17%), Positives = 125/323 (38%), Gaps = 51/323 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A ++NTI  L   + K  IA+ L++ +    +R  +  ++V+L  +V   
Sbjct: 18  RDFQVELLASAYERNTIICLGHRSSKEFIALKLLQELSRRARRHGR--VSVYLSCEVGTS 75

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK----------QVLVMTAQILL 414
            +   +               M     D + WQ + D +           V ++  +   
Sbjct: 76  TEPCSIY-------------TMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFF 122

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            +L    + + +I L++L++CH +        +      T     RP + G+ A P++  
Sbjct: 123 YLLETRDLLLSSIELIVLEDCHDSAVYQRIRPLFENHIMTAPPADRPRILGL-AGPLHSA 181

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
           G   Q   A+ +  LE  +   + T  D   + ++   P E +V+    A       ++ 
Sbjct: 182 GCELQQLSAM-LATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQ---CAPF-----EMD 232

Query: 535 QMEVAVEEAAQSSS------RRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
           ++ + + +   +        R   ++  G       +EL+ +         D   + +  
Sbjct: 233 ELSLVLADVLNTHKSFLLDHRYDPYEIYGTDQ--FMDELKDI--------PDPKVDPLNV 282

Query: 589 LRAINYALGELGQWCAYKVAQSF 611
           + ++   L E+G WC  + A  F
Sbjct: 283 INSLLVVLHEMGPWCTQRAAHHF 305


>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
 gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
          Length = 2270

 Score =  223 bits (568), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 178/549 (32%), Positives = 262/549 (47%), Gaps = 103/549 (18%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+
Sbjct: 1722 DLTNHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1781

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQ 1492
             +R + VSNL LY+    K L   + A +F P   W  P   +P      K+ + +L D 
Sbjct: 1782 HLRSKQVSNLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVP------KELEQALIDA 1835

Query: 1493 EKSVAEDKLGTDKNYNEY-------------------EDDDMEDGE---------LEGD- 1523
            +       L    +  +                    +D D E+GE         +  D 
Sbjct: 1836 KIPACHWNLADLPDIKQLSSEEICKLVKERAQLLGLLDDSDNEEGEHMKEIQQLEIRNDE 1895

Query: 1524 ---SSSY------------RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-- 1566
               +S Y              +  K++AD VEALIG Y +E G   A  LM W+GI+V  
Sbjct: 1896 FIKNSDYFACFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLP 1955

Query: 1567 ---------------ESDPEEVG-----------CPSRPACV-----PESVLRSV--DFH 1593
                            S P EV             P R   +     PE  L  +   + 
Sbjct: 1956 VCEQPFDPTAPRIPGSSAPYEVNGKQIQSIYGYWIPPRSPLLTHAPNPEKSLEHLLDGYS 2015

Query: 1594 ALEDALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
            A ED+L  +F+DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+      
Sbjct: 2016 AFEDSLGYRFQDRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQH 2075

Query: 1653 PPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEEL 1705
             PG LTDLR+A VNN  FA +AV+H  H + RH S  L+  I  FV+        + EE 
Sbjct: 2076 SPGALTDLRSALVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHSISEEY 2135

Query: 1706 LKPGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
                 +      D + PK LGD+ ES+AGAIFLDS      VW+V++ ++ P +     +
Sbjct: 2136 YLISEDECDEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYRGMMGPEIEQFSNS 2195

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAA 1820
            +P  P+REL E   + A+  + +    G     TVEV+  G   G+ +N   ++A+  AA
Sbjct: 2196 VPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGTFRGIGRN--YRIAKCTAA 2253

Query: 1821 RNALAVLKE 1829
            + AL  LK+
Sbjct: 2254 KCALRQLKK 2262



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I Y ++ +SSFP        L YS++ +YY +KY +++   KQPL+     S   
Sbjct: 1171 FYVAEICYHLSPKSSFPG-------LNYSTFEEYYYKKYNIQIQNCKQPLLDVDHTSARL 1223

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1224 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILIPELCTIHPFPASLWRAAVCLP 1281

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA +++ ++
Sbjct: 1282 CILYRINALLLADEIRKEV 1300



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 67/113 (59%), Gaps = 8/113 (7%)

Query: 727 FVERVVAALVLPKVFAELPSLSFV-------KSASLIGHNNSQEMRTFQMQETIAKFRDG 779
           F  +++ +L+   V ++ P LS++       KSA+ I      E+   + +E + +FR  
Sbjct: 497 FTTKILYSLLYEAVRSD-PQLSYINVQYTVDKSANPITEPKEAEVEHRKQEEVLKRFRMH 555

Query: 780 RVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
              LL+ TSV EEG+D+ +CN+VIR++   +  +Y+Q +GRAR P + +IL++
Sbjct: 556 ECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARAPSAYHILIV 608



 Score = 63.9 bits (154), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 128/316 (40%), Gaps = 34/316 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A+++N I  L   + K  IA+ LI  +   L+   ++      +     V
Sbjct: 17  RDFQVELLASARERNLILCLAHNSNKEFIALKLIHELGFQLRSTAQRRKRTLYISNNDSV 76

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           Y    ++R  T   V H  G       D   W+R     QV++   +  L+ +    +++
Sbjct: 77  YS---LMRNLTDLKVVHVDG-------DEPDWERIVADYQVIIANERKCLDAVVCGYLEL 126

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + +NLL++DECH        + + SE+Y      +RP + G+     N   +  ++   +
Sbjct: 127 DEVNLLVIDECHKIYGNVEIAELFSEYYERC--RERPKILGLAGPLHNAGCIPGRLSAEL 184

Query: 485 KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE----YDKAASLWSLHEQLKQMEVAV 540
           +   LE  L +   T  D   + ++   P E++++         +L+       QM    
Sbjct: 185 E--QLERCLKAKAETASDIVTVLRYCTKPKELILQCAPPQQSELALYLREIVETQMTFLQ 242

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
           E     S      +F+        EEL+ +         D   + +  LR     L E+G
Sbjct: 243 EHRYDPSEIYEDDEFL--------EELKHI--------PDPKVDPLNFLREFLTVLDEMG 286

Query: 601 QWCAYKVAQSFLTALQ 616
            WCA + A + +  ++
Sbjct: 287 PWCADRAALALIVQIE 302


>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1465

 Score =  223 bits (568), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 204/744 (27%), Positives = 329/744 (44%), Gaps = 122/744 (16%)

Query: 261 VFRLGSWEADHNRAGKEANGINQECNGKV---GKKSEAKEKMPEEQARPYQLDVLEQAKK 317
           VF+  SW   H +A  + +G+    N  +   G  + A+        R YQ ++ E+AK 
Sbjct: 21  VFK--SWL--HEQAKIDNDGVIPAANAPLEGLGDAAAAEVSALMATPREYQNELFERAKS 76

Query: 318 KNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIRE 373
           KNTI  L+TG+GKTLIA++L+R +      D      +  A F+V KV L  QQ +VI  
Sbjct: 77  KNTIVVLDTGSGKTLIAIMLLRHVLEQELEDRANGGTRKTAFFVVDKVALCMQQYQVIHA 136

Query: 374 QTGYVVGHYCGEM-----GQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAIN 428
              + V  + GE+      Q  WDAQ     FD   ++V TAQ+LL+ L H  I M  IN
Sbjct: 137 TLPFSVTKFYGELQPLEQSQTHWDAQ-----FDENMIIVCTAQMLLDCLSHGFINMRQIN 191

Query: 429 LLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICN 488
           LLI DE HHA K+HPY+ +M  +Y   +  K P + G+TASPV+    +  +D    +  
Sbjct: 192 LLIFDEVHHAKKEHPYAAIMKRYYPRDNNVK-PRILGLTASPVD----TGTLDIETAVEK 246

Query: 489 LESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSS 548
           LES + S + T+             S+ V+E     + W+  EQ +++            
Sbjct: 247 LESLMCSEIATV-------------SDAVLE-----AGWTKREQKEKV------------ 276

Query: 549 RRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL---GELGQWCAY 605
                     R     ++++  Y    R   + A ++ Q   ++ ++      LG WCA 
Sbjct: 277 ----------RLYKPLKDVKDCYTKLARDIDEFAQHVPQLAASVQFSAKIGSALGPWCAD 326

Query: 606 KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
           +  Q  LT   +D   N                  +  +L +G  +       D+ +G +
Sbjct: 327 RFWQILLT---DDLMRN------------------MAVQLGKGKKTNFSYDRYDAASGAL 365

Query: 666 EGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRA 724
           E          ++D H  +          A+  +  ++ K+  L + L   ++   + + 
Sbjct: 366 ESLR------PIIDHHRFAP---------ASTDEDAISSKLVVLRETLCAAFEEESETKC 410

Query: 725 IIFVERVVAALVLPKVFAELPSLSFVKSAS-LIGHNNSQEMRTFQMQETIAK---FRDGR 780
           ++FV+    A++L   F++  +      A  +IG   S       ++E + K   F+ G 
Sbjct: 411 LVFVDEQFMAMILADYFSQPGTAPQGMIADFMIGLAKSFAHANLSLRERMQKLNDFKHGN 470

Query: 781 VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
              L ATSVAEEGLDI  C++VIRFD+  + + YIQSRGRARK  S YI M+E+ N  H 
Sbjct: 471 TNCLFATSVAEEGLDIPACDLVIRFDMCISAIQYIQSRGRARKASSVYITMMEQDNNQHL 530

Query: 841 TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGL 900
              RN     + LR+               R I +   P     + +  A +S  +++ +
Sbjct: 531 NRFRNVTFDAQCLRR-------FCQKLPPDRSIGIYERPPEKELLVADTATLSTQNSMAV 583

Query: 901 IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLA 960
           +  + S L        +PE+++         T ++C + LP +APF    G +  S   A
Sbjct: 584 LARFVSTLAQGMDRSPKPEYVV-----CATGTNFTCWVILPDSAPFNSTTGILERSKVRA 638

Query: 961 QQAVCLAACKKLHEMGAFTDMLLP 984
           + A    AC +L EMG+    L P
Sbjct: 639 RCAAAYEACTRLIEMGSINKNLQP 662



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 233/568 (41%), Gaps = 99/568 (17%)

Query: 1239 IVTAAHSGKR-FYVESIRYEMTAESSFP------RKEGY-LGPLEYSSYADYYKQKYGVE 1290
             V   HSG R F +  I + + A    P      +  GY         Y+   ++     
Sbjct: 837  FVVDPHSGARKFIIHEIEHALRATDQTPAGVPEHKNSGYQTSDRSIMQYSCSTRRAQRSS 896

Query: 1291 LIF-KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPG 1349
            ++F  +QP+ +   +S  +N L    +  E  +G      D+  Y+ L  +   +  +P 
Sbjct: 897  IVFDTEQPVYKAWLLSLRRNFLDD--DDMETVKG------DQRCYITL--QCLKVSAIPA 946

Query: 1350 SLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFC-------- 1401
             + R A  LPSI+ R+++ L+  + +D +   +P     EA T  +              
Sbjct: 947  DVARAALLLPSILHRLDTALIVTEARDMLGLNLPLQLAWEAFTKGADDADDDDGELDAEH 1006

Query: 1402 ------------YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
                        YER E LGD++LK   +  L+ +  +  E +    R  ++ N  L+  
Sbjct: 1007 EHEQQQHGGQRNYERLEFLGDSFLKMATTIALYTRNSEATEFEHHVERMLLLCNKNLFNT 1066

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            AL  GLQSYI++DRF    W                                        
Sbjct: 1067 ALDLGLQSYIRSDRFDRRTW---------------------------------------- 1086

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN--HLMKWIGIQVE 1567
            Y +  +  G+    ++  + L  KT+ADV EA+IG  Y+ G +   N    +K +   V 
Sbjct: 1087 YPNLPLVRGK-SAKATVVQQLGDKTIADVCEAIIGAAYMSGVQQGGNMDEAVKAVTKMVN 1145

Query: 1568 SDPEEV-------GCPSRPA--CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
            +D  ++          S PA    P SV        +   +  +F+   LL  A THAS 
Sbjct: 1146 NDNHKMTSFSDYYAAFSVPAWHLSPGSVSVRATVDRVAAIIGYRFRSPLLLRSAFTHASY 1205

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
             +  +  YQ LEF+GDA+LD +I  HLF +  +  P  LT+ + +  +N+    + V+  
Sbjct: 1206 KAEEIPSYQTLEFLGDALLDMVIVDHLFRTRPHAGPQALTESKMSVCSNQFLGCLCVELG 1265

Query: 1679 LHVHLRHGSSALDRQIRDFVKEV--LEELLKPGF------NSFGLGDCKAPKVLGDIVES 1730
            LH  L    +A+   ++ F ++V  L E             ++     + PK L D+VE+
Sbjct: 1266 LHRELLTADAAVPGHVKAFEEKVAYLREQAAGTGASAATNKAYWTLATRPPKALADVVEA 1325

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            + GA+F+D+  D SVV   FQ  + P +
Sbjct: 1326 LIGAMFVDARYDLSVVANFFQRFVQPHI 1353


>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
 gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
          Length = 2249

 Score =  223 bits (567), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/537 (31%), Positives = 258/537 (48%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1714 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1773

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1774 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1833

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      + LG ++N         ++G+L+  + S       
Sbjct: 1834 WKLADLLDIKNLSSVQICEMVREKAEALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1887

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
              Y ++S      K++AD VEALIG Y +E G   A   M W+G++V     ++   ++ 
Sbjct: 1888 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLEGANQE 1947

Query: 1580 ACVPESVLRSVD---------------------------------FHALEDALKIKFKDR 1606
              +P S   +V+                                 F   E++L  KF+DR
Sbjct: 1948 HRIPGSTKPNVEKMVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEVFEESLGYKFRDR 2007

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAED 2127

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 2128 VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 2187

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2188 PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2242



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L +A+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 814  TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTMFQYTLRLPINSPLK 872

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 873  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 932

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 933  EQIVQLSD--EPRPGTTKRRQYYYKRIA 958



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1147 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNASQPLLDVDHTSARL 1199

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1200 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1257

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1258 CILYRINGLLLADDIRKQVS 1277



 Score = 63.9 bits (154), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 493 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 552

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 553 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 612



 Score = 41.6 bits (96), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 58/325 (17%), Positives = 130/325 (40%), Gaps = 55/325 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM--LAVFLVPKVP 362
           R +Q+++L  A ++NTI  L   + K  IA+ L++    +L R+ ++   ++V+L  +V 
Sbjct: 18  RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQ----ELSRRGRQRGRVSVYLSCEVG 73

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK----------QVLVMTAQI 412
              +   +               M     D + WQ + D +           V ++  + 
Sbjct: 74  TSTEPCSIY-------------TMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEG 120

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN 472
            L++L    + + ++ L++L++CH +        +  E     +   RP + G+ A P++
Sbjct: 121 FLSLLEDRELLLSSVELIVLEDCHDSAVYQRIRRLFEEHIMPAAPVDRPRILGL-AGPLH 179

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
             G   Q   A+ +  LE  +   + T  D   + ++   P E +V+    A       +
Sbjct: 180 SAGCELQQLSAM-LATLEQSVLCRIETASDIVTVLRYCSRPHEYIVQ---CAPF-----E 230

Query: 533 LKQMEVAVEEAAQSSS------RRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
           + ++ + + +   +        R   ++  G       +EL+ +         D   + +
Sbjct: 231 MDELSLVLADVLNTHKSFLLDHRYDPYEIYGTDQ--FMDELKDI--------PDPKVDPL 280

Query: 587 QKLRAINYALGELGQWCAYKVAQSF 611
             + ++   L E+G WC  + A  F
Sbjct: 281 NVINSLLAVLHEMGPWCTQRAAHHF 305


>gi|195572986|ref|XP_002104476.1| Dicer-1 [Drosophila simulans]
 gi|194200403|gb|EDX13979.1| Dicer-1 [Drosophila simulans]
          Length = 1533

 Score =  223 bits (567), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 174/537 (32%), Positives = 260/537 (48%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 998  DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1057

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1058 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1117

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1118 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1171

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1172 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1231

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1232 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1291

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1292 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 1351

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 1352 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAED 1411

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 1412 VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 1471

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 1472 PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 1526



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 100  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 158

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH++G   D L P    G               E 
Sbjct: 159  HDIVGLPMPTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPED 218

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 219  EQIVQLSD--EPRPGTTKRRQYYYKRIA 244



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 433  FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 485

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 486  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 543

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 544  CILYRINGLLLADDIRKQVS 563


>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
 gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
          Length = 2193

 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 262/546 (47%), Gaps = 103/546 (18%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R
Sbjct: 1648 NHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLR 1707

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQEKS 1495
             + VSNL LY+    K L   + A +F P   W  P   +P      K+ + +L D +  
Sbjct: 1708 SKQVSNLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVP------KELEQALIDAKIP 1761

Query: 1496 VAEDKLGTDKNYNEY-------------------EDDDMEDGE-------LEGDSSSY-- 1527
                 L    +  +                    +D D E+GE       LE  +  +  
Sbjct: 1762 ACHWNLADLPDIKQLSSEEICRLVKERALALGLLDDSDNEEGETMKEIQQLETRNDEFIK 1821

Query: 1528 ----------------RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----- 1566
                              +  K++AD VEALIG Y +E G   A  LM W+GI+V     
Sbjct: 1822 NAEYFACFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYE 1881

Query: 1567 ----ESDPEEVGC--------------------PSRPACV----PESVLRSV--DFHALE 1596
                E++P+  G                     P  P  +    P+  L  +   + A E
Sbjct: 1882 VPYDENNPKVPGSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFE 1941

Query: 1597 DALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
            D+L  +F DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG
Sbjct: 1942 DSLGYQFTDRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPG 2001

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNSF 1713
             LTDLR+A VNN  FA +AV+H  H + RH S  L+  I  FV+   +   ++   +   
Sbjct: 2002 ALTDLRSALVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLI 2061

Query: 1714 GLGDC------KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +C      + PK LGD+ ES+AGAIFLDS      VW+V++ ++ P +     ++P 
Sbjct: 2062 SEDECDEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPK 2121

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
             P+REL E   + A+  + +    G     TVEV+  G   G+ +N   ++A+  AA+ A
Sbjct: 2122 SPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGTFRGIGRN--YRIAKCTAAKCA 2179

Query: 1824 LAVLKE 1829
            L  LK+
Sbjct: 2180 LRQLKK 2185



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I Y ++ +SSFP        L YS++ +YY +KY +++   KQPL+     S   
Sbjct: 1083 FYVAEICYHLSPKSSFPG-------LNYSTFEEYYYKKYSIQIQNCKQPLLDVDHTSARL 1135

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1136 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILIPELCTIHPFPASLWRAAVCLP 1193

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA +++ ++
Sbjct: 1194 CILYRINALLLADEIRKEV 1212



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFV-------KSASLIGHNNSQEMRTFQMQET 772
           A+IF      A +L  +F E     P L+++       K+A  I      E+   + +E 
Sbjct: 496 ALIFCNSKFIAKILYSLFYESIRSDPQLAYINVQYTVDKTADPIKDPKEAEIEHRKQEEV 555

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     LL+ TSV EEG+D+ +CN+VIR++   +  +Y+Q +GRAR   + +IL +
Sbjct: 556 LKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTAYHILFV 615



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 63/298 (21%)

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLE 950
            V L++A+ +++ YC++LPSD ++ L P +   +  +  G   Y C +++P N+P  E + 
Sbjct: 755  VRLSNAIQMVNKYCAKLPSDTFTKLTPLWRGAKTVR-NGQELYQCTIRMPINSPLKEDIV 813

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND----------- 999
            G    +  LA++     AC+ LH+ G   D L P      +  + D  D           
Sbjct: 814  GLPMPTEILARRMAAYTACRVLHKAGELDDSLQPIGKESFRAFEADWEDFELESNDAQIV 873

Query: 1000 --EGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSK--LFHLFMYTVKCV----- 1050
                EP PGT + R++Y + +A         S      GSK  L+H+ M T++C      
Sbjct: 874  IENSEPRPGTTKRRQYYYKRIAS------AFSECRPTIGSKVYLYHINM-TLQCPIPEEQ 926

Query: 1051 ---------------NNGISKDPFLTQVSDFAVLF-SSELDAEL-----------ASLKN 1083
                             GI     + +VS F +   S E+   L             L+ 
Sbjct: 927  NTRGRKIYPPEDSPQGFGILTTKLIPKVSAFPIFTRSGEVKVALNLCDERPILNQEQLER 986

Query: 1084 FHVRLMSIVLDV-DVEPYTTPWDP---AKAYLFVPVVSDKSVDPMNELDWDLVEKITK 1137
             H+ +      V  ++ Y   +DP      +  VP ++ +SV     +DW+ ++ I K
Sbjct: 987  IHMFINYTFTKVLRLQKYLMLYDPDAMENCFFIVPTITRESV---VTVDWNFIDTIAK 1041



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 135/315 (42%), Gaps = 27/315 (8%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ+++L  AK++N I  L   + K  IA+ LI  + + L++   K      + +   V
Sbjct: 17  RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRKRTIYISQNDSV 76

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQR---WQREFDTKQVLVMTAQILLNILRHSI 421
           +    +IR+ T   V +       D  DA     W++  D  QV++   +  L+ +    
Sbjct: 77  FN---LIRDLTDLKVINV-----NDLEDADEDYDWEQIVDDYQVIITDERKCLDAIICGY 128

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + +  +NLL++D+CH        S +  ++Y+     ++P + G+     N   +  ++ 
Sbjct: 129 LDLNEVNLLVIDDCHKVYGNEEISKLFIDYYNVC--REKPKILGLAGPLHNAGCIPGRLS 186

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
             ++   LE  L +   T  D   + ++   P E++++    A+  +L   LK  E+ + 
Sbjct: 187 AELE--QLEYCLQAKAETASDIVTVLRYCTKPKEILLQCAPPAN-SNLASYLK--EIVLS 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ 601
           +       R     +   D    EEL+ +         D  A+ ++ L      L E+G 
Sbjct: 242 QITFLEDHRYDPSEIYEDDEFL-EELKNI--------PDPRADPLKFLHEFLAVLEEMGP 292

Query: 602 WCAYKVAQSFLTALQ 616
           WCA + A + +  ++
Sbjct: 293 WCADRAALAMIVQIE 307


>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
 gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
          Length = 2256

 Score =  222 bits (566), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 174/538 (32%), Positives = 257/538 (47%), Gaps = 82/538 (15%)

Query: 1373 QLKDKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
            Q  + + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG
Sbjct: 1714 QQPELVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEG 1773

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLP 1476
            +L+ +R + V+NL LY+    K L  Y+ A +F P   W  P                +P
Sbjct: 1774 KLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIP 1833

Query: 1477 VFDE------DTKDGDSSLFDQEKSVAEDKLGTDKNYNE----YEDDDMEDGELEGDSSS 1526
                      D K+  S    +      + LG   N ++     +  D++D     D S 
Sbjct: 1834 THHWKLADLLDIKNLSSVQICELVREKAEALGLGANVDQPIATQQHADLDDSNETNDFSC 1893

Query: 1527 Y--------RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---ESDPEEVGC 1575
            +          +  K++AD VEALIG Y +E G   A   M W+GI+V   + +P     
Sbjct: 1894 FIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYQLEPAAADI 1953

Query: 1576 PSR-PACV----------------PESVL--------RSVD-----FHALEDALKIKFKD 1605
              R P                   P S L        R ++     F   E +L   F+D
Sbjct: 1954 EQRKPGSTKPDANNMVTVYGDWPTPRSPLLHFAPNAHRELEELLSGFEEFEASLGYTFRD 2013

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            R  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A 
Sbjct: 2014 RSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSAL 2073

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLG 1716
            VNN  FA +AV+H  H + RH S  L+  I  FV+   E          L          
Sbjct: 2074 VNNTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAE 2133

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQER 1774
            D + PK LGD+ ESIAGAIFLDS     VVWQVF  ++ P +     ++P  P+REL E 
Sbjct: 2134 DVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVFSNMMKPEIEQFSNSVPKSPIRELLEL 2193

Query: 1775 CQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
              + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2194 EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2249



 Score = 72.0 bits (175), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 19/149 (12%)

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
            STGA V L++A+ L++ YC++LPSD ++ L   +      +  G T Y   L+LP N+P 
Sbjct: 820  STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASVVR-DGVTLYQYTLRLPINSPL 878

Query: 947  EK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------E 990
            +  + G    +  LA++   L AC +LH++G   D L P    G               E
Sbjct: 879  KHDIIGLPMPTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFDLEPE 938

Query: 991  QQEKVDQNDEGEPLPGTARHREFYPEGVA 1019
             ++ V QND  EP PGT + R++Y + +A
Sbjct: 939  DEQIVQQND--EPRPGTTKRRQYYYKRIA 965



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1154 FYVAEICPHLSPLSCFPGDH-------YRTFKHYYLVKYGLTIQNAAQPLLDVDHTSARL 1206

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1207 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1264

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1265 CILYRINGLLLADDIRKQVS 1284



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 11/124 (8%)

Query: 720 EDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQ 768
           E   A+I+  +   A VL ++ AEL    P L F++        A         E+   +
Sbjct: 489 ETLCALIYCNQNHTARVLFELLAELSRRDPDLKFLRCQYTTDRVADPATEPKEAELEHRR 548

Query: 769 MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
            ++ + +FR     +L+ TSV EEG+D+ +CN+VIR+D   T  +Y+Q +GRAR   + +
Sbjct: 549 QEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVIRWDPPTTYRSYVQCKGRARAAPAYH 608

Query: 829 ILMI 832
           I+++
Sbjct: 609 IMLV 612



 Score = 43.1 bits (100), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 64/323 (19%), Positives = 124/323 (38%), Gaps = 53/323 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A ++NTI  L   + K  IA+ L++ +     R  K             V
Sbjct: 18  RDFQVELLATAFERNTIICLGHRSSKEFIALKLLQELSRKGLRNGKVS-----------V 66

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDT----------KQVLVMTAQILL 414
           Y   ++  E T          M     D + WQ + D             V +      L
Sbjct: 67  YLTNQIDAENTSIYT------MLTHLTDLKVWQEQRDQGISADHCWTDYHVSIHKPTSFL 120

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN-- 472
           ++L+   + + ++ L++L++CH +        +  EF        RP + G+ A P++  
Sbjct: 121 SLLKAGNLLLSSVQLIVLEDCHDSAVYRSILPIFEEFILPAKSADRPRILGL-AGPLHSA 179

Query: 473 ---LKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
              L+ + + +D       LE ++   + T  D   + ++   P E +V+    A L   
Sbjct: 180 NCELEELHAMLD------TLEQQMLCRIETASDIVTVLRYCAKPHEYIVQ---CAPLEMD 230

Query: 530 HEQLKQMEV-AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
           H     +++    ++  S  R   ++  G       E+L+ +         D   + +  
Sbjct: 231 HLSRVIVDILTTHKSFLSDHRYDPFEIYGTDQ--FMEDLKDI--------PDPKQDPLNV 280

Query: 589 LRAINYALGELGQWCAYKVAQSF 611
           L A+   L E+G WC  + A  F
Sbjct: 281 LDALLSVLHEMGPWCTQRAALHF 303


>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
 gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
 gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
          Length = 2249

 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 174/537 (32%), Positives = 260/537 (48%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1714 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1773

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1774 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1833

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1834 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1887

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1888 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1947

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1948 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 2007

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAED 2127

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 2128 VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 2187

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2188 PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2242



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 816  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 874

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 875  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 934

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 935  EQIVQLSD--EPRPGTTKRRQYYYKRIA 960



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1149 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1201

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1202 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1259

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1260 CILYRINGLLLADDIRKQVS 1279



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 495 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 554

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 555 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 614


>gi|357431202|gb|AET78278.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 125/151 (82%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVF EDTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFXEDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             AANHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAANHLMKWIGIHVEDDPDEVEGTVKNVNVP 146


>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
 gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
          Length = 2250

 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 172/537 (32%), Positives = 259/537 (48%), Gaps = 90/537 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1715 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1774

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1775 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1834

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      + LG ++N        + +G+L+  + S       
Sbjct: 1835 WKLADLLDIKNLSSVQICEMVREKAEALGLEQN------GGVPNGQLDDSNDSCNDFSCF 1888

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1889 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDEASQE 1948

Query: 1573 VGCPSRPACVPESVL---------RSVDFH-----------------ALEDALKIKFKDR 1606
               P      PE+++         RS   H                   E++L  KF+DR
Sbjct: 1949 HRIPGSTKPNPENMVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFDEFEESLGYKFRDR 2008

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 2009 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2068

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGD 1717
            NN  FA +AV+H  H   RH S  L+  I  FV+   E          L          D
Sbjct: 2069 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAED 2128

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL E  
Sbjct: 2129 VEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLELE 2188

Query: 1776 QQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2189 PETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2243



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L +A+ L++ YC++LPSD ++ L   +   R+E+  G T Y   L+LP N+P +
Sbjct: 815  TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLYQYTLRLPINSPLK 873

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 874  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 933

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 934  EQIVQLSD--EPRPGTTKRRQYYYKRIA 959



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1148 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNASQPLLDVDHTSARL 1200

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1201 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1258

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1259 CILYRINGLLLADDIRKQVS 1278



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 493 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 552

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 553 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 612



 Score = 44.3 bits (103), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 59/320 (18%), Positives = 130/320 (40%), Gaps = 45/320 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A ++NTI  L   + K  IA+ L++ +    +++ +  ++V+L  +V   
Sbjct: 18  RDFQVELLAAAYERNTIICLGHRSSKEFIALKLLQELSRRARQRGR--VSVYLSCEVGTS 75

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK----------QVLVMTAQILL 414
            +   +               M     D + WQ + D +           V ++  +  L
Sbjct: 76  TEPCSIY-------------TMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFL 122

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           ++L    + + ++ L++L++CH +        +  E     +   RP + G+ A P++  
Sbjct: 123 SLLEDRELLLSSVELIVLEDCHDSAVYQRIRRLFEEHIMPAAAVDRPRILGL-AGPLHSA 181

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
           G   Q   A+ +  LE  ++  + T  D   + ++   P E +V+     + + + E L 
Sbjct: 182 GCELQQLSAM-LATLEQSVNCRIETASDIVTVLRYCSRPHEYIVQ----CAPYEMDE-LS 235

Query: 535 QMEVAVEEAAQS---SSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            +   V    +S     R   ++  G       +EL+ +         D   + +  + +
Sbjct: 236 LVLADVLNTHKSFLLDHRYDPYEIYGTDQ--FMDELKDI--------PDPKVDPLNVINS 285

Query: 592 INYALGELGQWCAYKVAQSF 611
           +   L E+G WC  + A  F
Sbjct: 286 LLAVLHEMGPWCTQRAAHHF 305


>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Trametes versicolor FP-101664 SS1]
          Length = 1508

 Score =  221 bits (564), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 215/762 (28%), Positives = 340/762 (44%), Gaps = 140/762 (18%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P    R YQ ++LE++  +N I  L+TG+GKT IAVL ++    + +R ++K ++ F+ P
Sbjct: 15  PIVHTRAYQQELLEESLHRNLIIALDTGSGKTHIAVLRMKL---EAERHSRK-VSWFIAP 70

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILR 418
            V LV QQ EVI+      VGH  G    + W DA  W+R   T +++V T Q+LL+ L 
Sbjct: 71  TVALVDQQYEVIKTAIPVSVGHVSGASEPNQWKDASLWRRILATHRIMVTTPQVLLDALH 130

Query: 419 HSIIKMEA-INLLILDECHHAVKKHPYSLVMSEFYHT---------TSKEKRPSVFGMTA 468
           H+ + +   I L++ DE HHA  KHPYS++M  FY            +   RP+V G+TA
Sbjct: 131 HAYVDLGTDIGLMVFDEAHHATGKHPYSMIMKNFYMNLPSRTNLTGPTDRVRPAVLGLTA 190

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDSVVCTI-KDRKELEKHVPMPSEVVVEYDKAASLW 527
           SP+        VD A +  +LE  LDS + +  K R  L +HV  P    V Y     +W
Sbjct: 191 SPI----YGGNVDVAFR--DLEKNLDSTIRSARKHRDNLAEHVYRPEFKHVLYASPIHVW 244

Query: 528 ---------SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE 578
                    SL   +  ++  +E      S RS+   +   D   + + +Q+    ++ +
Sbjct: 245 DGLPSANYQSLQTVIDALD--IENDPYVKSLRSRLAKLRPTDDRHRLD-QQLSKAIDKED 301

Query: 579 SDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVV 638
           +     L    RA      ELG W A                          + Y++KV+
Sbjct: 302 TFTHKGLRDFARAAAEICVELGPWAA--------------------------DWYVAKVI 335

Query: 639 SLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLD----SHVVSGGEHVDVIIG 694
                         + AKV  +    +     E E+  LL      +V +    VD I+ 
Sbjct: 336 --------------ERAKVAANPYNNIMSAWQEKEKRYLLSIISKVNVTTPPSDVDKIVS 381

Query: 695 AAVADGKVTPKVQSLIKIL-----LKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLS 748
                  V+PKV++L+  L     L     ED+  +IFV R    L L ++   +P +  
Sbjct: 382 G------VSPKVRALVDSLVVEEGLFRSRDEDYSGLIFVTRRDTVLALAELLQRIPETAQ 435

Query: 749 FVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQ 798
             +   L+G ++S +  +F             +T+  F+ G   L+V+TSVAEEG+DI+ 
Sbjct: 436 LFRIGCLLGSSSSFKRHSFLDITRNILDESQADTLRDFKIGDKNLIVSTSVAEEGIDIQA 495

Query: 799 CNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           C  VIRFD    ++A+ QSRGRAR+  S +I+M E                ++    EA 
Sbjct: 496 CGSVIRFDPPPNIVAWAQSRGRARRKRSSFIIMFEET------------GPQKVKEWEAT 543

Query: 859 ERTDLSHLKDTSR--LISV------DAVPGTV-YQVESTGAVVSLNSAVGLIHFYCSQLP 909
           ER  +    D  R  ++ V      D + G V ++V STGA+++L+SA+  ++ +C+ +P
Sbjct: 544 ERQMMLAYNDPRRDAIVPVDEDDAFDDMDGYVEFEVASTGALLTLHSAIPHLNHFCAVIP 603

Query: 910 S-------DRYSILRPEFIMERHEKPG-------GPTEYSCKLQLPCNAP--FEKLEGP- 952
           S         Y +  P+++   H  P        GP  +   + LP   P    K   P 
Sbjct: 604 SGGHESHVPIYELDPPDYVEGWHSLPNPSRMPYQGP--WGATVSLPRALPKHLRKFSTPQ 661

Query: 953 VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEK 994
           +  S R AQQ V   A  +L+  G   + LLP   + E  +K
Sbjct: 662 IHGSKRRAQQHVAYQAYLELYHAGLLDNHLLPLSTAIEPDKK 703



 Score =  132 bits (333), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 231/522 (44%), Gaps = 80/522 (15%)

Query: 1338 PPE--LCFIHPLPGSLVRGAQR--------LPSIMRRVESMLLAIQLKDKINYP-----V 1382
            PP+  L  +HP   +LV  A R        LPSI+R + + L    L+  +        V
Sbjct: 952  PPDDSLFLLHP-QYALVELASRDEVQYALMLPSILRWLANALTVDALRTNLFRTTSVAGV 1010

Query: 1383 PASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            P   +L A+TA   QE   Y+R E LGD  LK+  S  L+ ++P  HEG L+R +   V+
Sbjct: 1011 PLPLLLTAITAPIAQELSHYQRLETLGDTVLKFTSSNQLYAEFPLWHEGYLSRKKDHAVA 1070

Query: 1443 NLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            N  L + A+ KGL  +I  DRF P +W      P     T+ G      +EK   ++   
Sbjct: 1071 NSSLAKEAVKKGLYQWIIRDRFVPRKWK-----PHCASSTQ-GPLDELVEEKEEVKEVDA 1124

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
                  + +    E+            LS+K LADVVE+LIG  Y  GG D A   +   
Sbjct: 1125 KVGKDGKPKKKKAEE------------LSTKMLADVVESLIGAAYEHGGFDLAIDCVARF 1172

Query: 1563 GIQVESDPEEVGCPSRPACVPESVLRSVDFHAL-EDALKIKFKDRGLLVEAITHAS-RPS 1620
            G+ +    +++    +     E ++   D  AL E  L  +FK R  LV+A+THAS +  
Sbjct: 1173 GLGISW--KKLSERIKEMHEVEDLVDLPDQLALVEQMLNYQFKRRTFLVQALTHASYQGD 1230

Query: 1621 SGVSCYQRLEFVGDAVLDHLITKHLFFSY-TNLPPGRLTDLRAAAVNNENFARVAV---- 1675
            S V   +RLEF+GD+ LD ++T +L+ +   N  PG +   + AAVN+   A V +    
Sbjct: 1231 SAVMSLERLEFLGDSALDMVVTDYLYHAEGKNYSPGYMHIKKEAAVNSHILAYVCLSTSV 1290

Query: 1676 --------------------KHKLHVH--LRHGSS-ALDRQIRDFVK-----EVLEELLK 1707
                                  K+H+   L H S   L+ Q   F +       + + L+
Sbjct: 1291 TVESVMPTWTLGGGLATTDDSQKVHLWQCLLHSSHRVLEDQNLTFARFEKHGPAIAQALR 1350

Query: 1708 PG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL-----LDPMVTP 1760
                +    L   +APK + D+VESI GA+++DS      V  V + L     ++ +V  
Sbjct: 1351 EDRIYPWAALTSLQAPKFISDMVESILGAVYVDSMGSLDAVRGVMRSLGLMQVIERVVIE 1410

Query: 1761 ETLPMHPVRELQERCQQQ--AEGLEYKASRSGNLATVEVYID 1800
            +   +HPV  L     +Q   + +EYK  R        V +D
Sbjct: 1411 DVDVLHPVSRLAIWAAKQDPQKKVEYKIEREKGQVKCAVLMD 1452


>gi|392593064|gb|EIW82390.1| ribonuclease III [Coniophora puteana RWD-64-598 SS2]
          Length = 1217

 Score =  221 bits (562), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 227/788 (28%), Positives = 360/788 (45%), Gaps = 114/788 (14%)

Query: 1113 VPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGK 1172
            VPV       P  EL  D   ++++  ++T  L R+     +     + G D+  Y F  
Sbjct: 481  VPVSVTVQCGPSLELGED---ELSQLHSFTVRLCRS-----MSNKPISCGLDQAPYFFAP 532

Query: 1173 L-RHGMAFGQKSHPTYGIRG-AIAQFDVVKAS---GLVPDREAMQIHNADMPTGKLMMAD 1227
            +  H ++ G+       +RG     +D+V+A+    LVP      +H +D+         
Sbjct: 533  VGDHTLSAGKVE-----LRGPGYVAWDIVEAACGEALVP------LHPSDL--------- 572

Query: 1228 SCANAGDLEGRIVT--AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK- 1284
               +  DLEG +V        +R+YVES+R ++  +S   + +  L   E+ S  DY K 
Sbjct: 573  --RSQHDLEGVVVQDRWVEFTRRYYVESVRTDLKPKS---KPDDALREAEFESILDYVKD 627

Query: 1285 -QKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCF 1343
             +K    L   +QPLI+   V    NLL+P    +E         + K    +L PEL  
Sbjct: 628  RRKDFEGLKNYEQPLIQVSKVPNLSNLLNPLKTAAE---------VGKPTARYLIPELTA 678

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCY 1402
             + +P ++ R A  LPS+ +R++++L+A +L   +  + +    +L AL+A S    F Y
Sbjct: 679  KYTIPANVYRMALLLPSVTQRIDNILIAKELNAMLFEHQITEGLLLSALSAPSALYAFDY 738

Query: 1403 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD 1462
            ER ELLGDA+LK++ S ++F+ YP   EG L  +RQ+M SN  L Q AL+  L  YIQ  
Sbjct: 739  ERLELLGDAFLKYITSIYVFVIYPAHAEGSLHNLRQKMTSNKALLQNALAIELPPYIQGK 798

Query: 1463 RFA-----PSRWAAPGVLPV----FDEDTKDG-DSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              +     P+ +      P+     DE      D+++ D        +  T K   +   
Sbjct: 799  PLSLKLWLPTNYTLDKCPPIAHQRHDEHAASAVDTTVVDTRPHPDTTQARTKKKVRKQNQ 858

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
            D +            + L  KT+ADVVEA+IG  Y+ GG D A  +MK + I + S  + 
Sbjct: 859  DQVT-----------QWLGDKTIADVVEAIIGAAYLSGGCDVALRVMKALTIPLNSVEQW 907

Query: 1573 --------VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS 1624
                       P   A +P    RS++F  +E  ++ K K   LL +A+TH S      +
Sbjct: 908  SDFGRKVLTPPPRVSAALPP---RSLEF--VEKLVRRKVKYPHLLAQALTHGSIQGYDAT 962

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL- 1683
             YQRLEF+GDA+LD ++ +H++    +L PG +T L++A V N   A + V   L+ HL 
Sbjct: 963  TYQRLEFLGDAILDFMVVRHIYHRDESLSPGVMTILKSAMVANSALAAICVWSGLNEHLL 1022

Query: 1684 ---RHGSSALDRQIRDFV---KEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAI 1735
                  S +  +  RD     +EV    L+ G     F L     PK L D+VESI GA+
Sbjct: 1023 VDDYEVSESFKKYARDLKAKEQEVRTASLRDGTPIGQFWL-HITPPKALSDVVESIIGAL 1081

Query: 1736 FLDSGRDTSVVW----QVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGL-EY---KAS 1787
            ++  G +   +     +V  P  D  +T +T+  HP + L +    QA G  EY   K  
Sbjct: 1082 YISDGFEPLSIEIFFDEVLMPFYDQYITLKTITEHPAKILFDLL--QAHGCQEYELDKGK 1139

Query: 1788 RSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK-----ETAEAKEKGDEN 1842
              G     +V + G  V  A +  +  A++LA    L  L+        T + + +G   
Sbjct: 1140 GDGQFKFCKVVVHGTLVAEATSDTQSAARRLACMETLDALEGDPEFMVRTCDCRAQG--- 1196

Query: 1843 GKKRKNGT 1850
              K+KN T
Sbjct: 1197 SSKKKNNT 1204



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 16/226 (7%)

Query: 782 TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT 841
            L+V+ S+  E L + + +V+IRF++ ++ ++Y  SR + R   S  + MIE+GN +   
Sbjct: 191 VLIVSQSI--EDLSVPKVDVIIRFNVIESQVSYAYSRAQCRGFLSQLVHMIEKGNDAQRR 248

Query: 842 FL--------RNARNSEETLRK-EAIERTDLSHLKDTSRLISVDAVP-----GTVYQVES 887
            L        ++ R  +  +R  +    + L +       +  +A P     G      +
Sbjct: 249 TLSRVSECARQDGRWIDFLVRNGKCCAPSSLLYESPQDHYLHEEAFPLLCADGRYLIDPT 308

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           T   + +N AV  I+   S L    ++      ++   E+  G   + C + LP   P  
Sbjct: 309 TAGHLHVNDAVVAIYRLASNLQRMMHTAPDEPLLLLESERKDGACLFQCTVNLPGLLPNV 368

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
           K  GP   +   A++  C  AC++LHE+GA    L     S  Q +
Sbjct: 369 KYSGPYALTSMKARRLACYGACEQLHEIGALPHALFSYNRSFSQND 414


>gi|134084339|emb|CAK48679.1| unnamed protein product [Aspergillus niger]
          Length = 1531

 Score =  220 bits (561), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 206/687 (29%), Positives = 306/687 (44%), Gaps = 134/687 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIAVLL++       ND        +A FLV  
Sbjct: 118 REYQLELFERAKVQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRMEGKPHRIAFFLVDS 177

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      VGH+ G MG D W    W + F    V+V TA+IL   L +S
Sbjct: 178 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNS 237

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IKM  IN+LI DE HH  K HPY+ ++ + Y      KRP +FGMTASP++ KG     
Sbjct: 238 YIKMSQINILIFDEAHHTKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG----- 292

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK-----AASLWS-LHEQLK 534
           D   +   LE  LDS + T  +   L +    P E V  ++K     A SL+  L ++  
Sbjct: 293 DIVDEATRLEKLLDSRIATTSNMSLLRQVARRPVERVWSFNKLEQPFATSLYKHLEDRFG 352

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
            M      A      R  WQ                                        
Sbjct: 353 DM------ACLEGIFRFAWQ---------------------------------------- 366

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
           A  ELG+WC+    +++  AL +D               L K         +EG+V +K 
Sbjct: 367 ASSELGRWCS---DRAWARALADD--------------VLPK---------LEGSV-RKT 399

Query: 655 AKVVDSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
           A    S N   E    EI    E  E++ S+  S  E            G+++PKVQ L 
Sbjct: 400 ANSETSSN-VPESAYKEILRITEASEIVKSYAFSSPETF----------GQLSPKVQVLR 448

Query: 711 KILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---R 765
           + L +Y  + TE  + I+F ++   AL+L ++F  L ++ F++   LIG  +        
Sbjct: 449 EELARYFGRQTET-KCIVFTQKRYTALILAELFQTL-NIPFLRPGVLIGVRSGDLAGMNI 506

Query: 766 TFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
           TF+ Q  ++ KFR G +  L ATSVAEEGLDI  CN+V+     K V     S  R R  
Sbjct: 507 TFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVV--STCKAVGVRDISIQRMRVW 564

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ 884
             + I  + RG      +LR+     + L+    +R       D   ++  D    T ++
Sbjct: 565 SKEGIWSMSRG------YLRS-----KMLKTLPEDRLLYGFDHDLDTVLQKDEGNRT-FR 612

Query: 885 VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE--YSCKLQLPC 942
           ++STGA ++ +SA  ++  Y S L  ++    +  +++        P    + C++ LP 
Sbjct: 613 IKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVVL-------PINGAFVCEVILPE 665

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAAC 969
            +P   L G       +A+++     C
Sbjct: 666 KSPIRGLTGSPAMKKSIAKRSAAFDTC 692



 Score =  151 bits (382), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 251/613 (40%), Gaps = 124/613 (20%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL    +   + E             F+  E   +  +P S     
Sbjct: 953  QPVLRAELVRLRRNLLDKMTDTERDVETR----------CFICIEPLKVSAIPASTAFSC 1002

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+++ L+++Q  + +N+ V     LEA T  S        Q+          
Sbjct: 1003 LAFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGRN 1062

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1063 YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1122

Query: 1462 DRF------APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
              F      A   W   G+                         KL   K+++       
Sbjct: 1123 RGFSRLTDAARHTWYPEGL-------------------------KLLQGKDHSR------ 1151

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGC 1575
                 +  + S   L+ KT+ADV EALIG   + GG D          + V++    V  
Sbjct: 1152 -----KATTESKHALAEKTIADVCEALIGAALLSGGPDHR------FDMAVKAVTTLVNS 1200

Query: 1576 PSRPA----------CVPESVLRSVD------FHALEDALKIKFKDRGLLVEAITHASRP 1619
            PS  A           +P+   R+ D         +E+ L  +F+   LL  A TH S P
Sbjct: 1201 PSHKAERWKDYISFYTIPKYQRRAADGAELYLSRKIEEKLSYRFRYPTLLGSAFTHPSYP 1260

Query: 1620 SS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
            S+   V CYQRLEF+GD+++D +  + LF  + +  P  LT+ + A V+N+    +AVK 
Sbjct: 1261 SAWAKVPCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKL 1320

Query: 1678 KLHVHLRHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKV------------- 1723
             LH HL++ S+ L  QI  + +E+   E    G   +       PKV             
Sbjct: 1321 GLHTHLKYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVD 1380

Query: 1724 ---LGDIVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLP-MHPVRELQER- 1774
               L D+VE+  GA+F+DS  +  V+ + F    +P  + M   +T    HP   L  R 
Sbjct: 1381 GQCLPDMVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFEDMAIYDTFANKHPTTFLHNRL 1440

Query: 1775 ---------CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
                     C +  E      + +G LA V V+   +  G A +   + A+  A+  ALA
Sbjct: 1441 TNEFGCVNYCLKAGEMPSIDGAPAGVLAAVIVHDVVIAEGTATS--GRYAKVKASEKALA 1498

Query: 1826 VLKEKETAEAKEK 1838
            VL E  +AE + K
Sbjct: 1499 VLDEISSAEFQRK 1511


>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
 gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
          Length = 2252

 Score =  220 bits (561), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 174/534 (32%), Positives = 257/534 (48%), Gaps = 89/534 (16%)

Query: 1378 INYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+ +
Sbjct: 1720 VGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHL 1779

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQEK 1494
            R + V+NL LY+    K L  Y+ A +F P   W  P   +P      K+ + +L + + 
Sbjct: 1780 RSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVP------KELEKALIEAKI 1833

Query: 1495 SVAEDKLGT---DKNYNE---------------YEDDDMEDGELEGDSSS---------Y 1527
                 KL      KN +                 E +  + G+L+  + S         Y
Sbjct: 1834 PTHHWKLADLLDIKNLSSVQICELVREKAEALGLEQNGPQSGQLDDSNDSCNDFSCFIPY 1893

Query: 1528 RVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------------- 1566
             ++S      K++AD VEALIG Y +E G   A   M W+GI+V                
Sbjct: 1894 NLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPFTRQPAEQEEAKRV 1953

Query: 1567 ----ESDPEEVGCPSRPACVPESVLRSV-------------DFHALEDALKIKFKDRGLL 1609
                +SD E +         P S L                 F   E +L  KF+DR  L
Sbjct: 1954 PGSSKSDAEGMVTVYGAWPTPRSPLLHFAPNATGELDQLLSGFEEFEASLGYKFRDRSYL 2013

Query: 1610 VEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            ++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN 
Sbjct: 2014 LQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNT 2073

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGDCKA 1720
             FA +AV+H  H   RH S  L+  I  FV+   E          L          D + 
Sbjct: 2074 IFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDVEV 2133

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQ 1778
            PK LGD+ ESIAGAIFLDS     VVWQV+  ++ P +     ++P  P+REL E   + 
Sbjct: 2134 PKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMSPEIEQFSNSVPKSPIRELLELEPET 2193

Query: 1779 AEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2194 AKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2245



 Score = 73.2 bits (178), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 15/146 (10%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ LI+ YC++LPSD ++ L   +   R E+  G T Y   L+LP N+P +
Sbjct: 817  TGASVDLGSAIALINKYCARLPSDTFTKLTALWRCTRSER-AGKTLYQYTLRLPINSPLK 875

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD-------QND 999
              + G    +  LA++   L AC +LH +G   D L P    G +  + D         D
Sbjct: 876  HDIVGLPMPTQTLARRLAALQACAELHRIGELDDQLQPIGKEGFRALEADWECFDLEPED 935

Query: 1000 E------GEPLPGTARHREFYPEGVA 1019
            E       EP PGT + R++Y + +A
Sbjct: 936  EQILQMSDEPRPGTTKRRQYYYKRIA 961



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP ++       Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1150 FYVAEICPHLSPLSCFPGEQ-------YRTFKHYYYAKYGLNIQNSSQPLLDVDHTSARL 1202

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1203 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1260

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1261 CILYRINGLLLADDIRKQVS 1280



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 30/187 (16%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
            +I+  +   A VL ++ AE+    P+L F++        A         E+   + +E 
Sbjct: 493 GLIYCNQNHTARVLFELLAEMSRRDPNLKFLRCQYTTDRVADPATEPKEAELEHRRQEEV 552

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TS+ EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 553 LKRFRMHDCNVLIGTSILEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 612

Query: 833 ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
                           S ET   +++E TD SH     R I      G   + ES     
Sbjct: 613 A--------------PSFETPPVDSVELTDESH-----RFICGAPAAGESQEAESDSDDS 653

Query: 893 SLNSAVG 899
           ++ +++G
Sbjct: 654 AIPNSIG 660


>gi|357431194|gb|AET78274.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  220 bits (561), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 111/151 (73%), Positives = 124/151 (82%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVFD DTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDXDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             A NHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAPNHLMKWIGIHVEDDPDEVEGTVKNVNVP 146


>gi|336386278|gb|EGO27424.1| hypothetical protein SERLADRAFT_446652 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1267

 Score =  220 bits (561), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 176/572 (30%), Positives = 275/572 (48%), Gaps = 62/572 (10%)

Query: 1247 KRFYVESIRYE---MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVE-LIFKKQPLIRGR 1302
            +R+YV   R +   M+  +  PR+  Y   LEY        ++ G++ L+ ++QPLI   
Sbjct: 592  RRYYVVKTRPDLSPMSKPADSPREAAYPNLLEYCK-----SRRKGLDCLVDQEQPLIEVS 646

Query: 1303 GVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIM 1362
                  N LSP F           +        +L PELC    +P S +R A  LPSI 
Sbjct: 647  KTPGLSNHLSPTFRPLTTSAKASAK--------YLIPELCAKLTIPASTLRTALLLPSIS 698

Query: 1363 RRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFL 1421
            RR++ +L+  +L  K  N+ +    +L A++  S    + YER E+LGDA+LK++ S ++
Sbjct: 699  RRIDDILIVKELNAKFFNHHITEELLLAAISTPSAGFDYDYERLEVLGDAFLKYLSSIYV 758

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP--GVLPVFD 1479
            F+  P K+EG L   RQQ++SN  L + A + GL  +IQ+  F+   W  P   ++ + +
Sbjct: 759  FVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRPFSYKVWQPPNFSLVSIRE 818

Query: 1480 EDTKDGDSSLFDQEKSVA-----EDKLGTDKNYNEYEDDDMEDGE-LEG----------- 1522
            + T + D+    +  S +     E +   +    + E +D   G+ L G           
Sbjct: 819  DFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSVKGKALPGSHASSKKENRG 878

Query: 1523 --DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA 1580
              D+   + L  K +ADVVEA+IG  Y+ GG+D A    K + I +  + E      R A
Sbjct: 879  QQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDIPIR-NIEHWADFGRKA 937

Query: 1581 CVP----ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAV 1636
              P     + LR     A+E  +  KF    LL +A+THAS      +CY+RLEF+GDA+
Sbjct: 938  LTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQGYQSTCYERLEFIGDAI 997

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            L+ ++ +H+F     + PG LT ++ A V+N   A V V   LH H+ + S  L   I+ 
Sbjct: 998  LEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLHEHILYESFPLAGNIQG 1057

Query: 1697 FVKEV-----------LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            ++ E+             E   PG   F L D + PK L D+VESI GAI++  G     
Sbjct: 1058 YIDELKKKQTEEYELAAREQRTPG--QFWL-DVEPPKALSDVVESIIGAIYISDGFQPIG 1114

Query: 1746 VWQVFQPLLDPM----VTPETLPMHPVRELQE 1773
               VF  +L P     +T +TL  HP + + E
Sbjct: 1115 SELVFNNILKPFYNKHITLKTLSHHPTKVILE 1146



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 189/470 (40%), Gaps = 85/470 (18%)

Query: 702  VTPKVQSLIKILLKYQHT-EDFRAIIFVERVVAALVLPKVFAELPS-LSFVKSASLIGHN 759
            VTPK   L++IL   Q    DFR I+ V++   AL +  +     + L F++  +LI  +
Sbjct: 92   VTPKFAKLVQILKSCQILGSDFRGIVIVQKRAVALAIVDLLRNSDNGLGFLRPYALISTS 151

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            +      +   ET  KF  G   LLV T  + E LDI   ++VI++DL ++ L+YI +  
Sbjct: 152  D-----FYHQDETCRKFSLGTHNLLVITK-SNEDLDISASSLVIKYDLFESQLSYIYAWC 205

Query: 820  RARKPGSDYILMIERGNLSH-------ATFLRNARNSEETLRKEAIERTDLSH-LKDTSR 871
               +  S  + M E+G+ +H        +F +  R S E   KE   R  L H L+DT  
Sbjct: 206  HTGRCHSYLVHMAEKGDETHRRILSELTSFSQENRTSIEKF-KEYRGRFLLPHKLEDT-- 262

Query: 872  LISVDAVP------GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP----EFI 921
            + S D+            +   T   + L  A   ++    +L +  Y + +P     F 
Sbjct: 263  IHSYDSQTEDEGEKSVSLKDPVTSNRICLRDATSTVY----RLAAAMYDVEKPFDVELFR 318

Query: 922  MERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
            + +H    G   YSC + LP +       G  C +   A+++ C   C +L   G     
Sbjct: 319  INKHLDEQGSWTYSCNVMLPAHPTLRVFTGSSCPTPADARRSACYYTCTELFNAGVLDYR 378

Query: 982  LLPDK---------GSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRD 1032
            L P +            E+ +K   N  G+  P        YP                 
Sbjct: 379  LFPQQRLKPARFLEDDFEEPKKNMSNKNGQATPN-----HLYPRRKPAFWSN-------- 425

Query: 1033 GCTGSKLFHLFMYTVKCVNNGISKDPF----------LTQVSDFAVLFSS---------- 1072
              + + +F+  +Y V    +G S D +          L ++ DF + FS           
Sbjct: 426  --SLTAVFNDTLYPVMVALSGFSPDQYAPVLLLTRHPLPRMHDFKLFFSGISAPLHLAWG 483

Query: 1073 ---ELDA-ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSD 1118
               E+D  +LA L  + +R+  IV +   +P+  P +   AY + P+ SD
Sbjct: 484  GPLEVDQNQLALLHQYTLRICRIVAN---KPFACPLN-EMAYFYAPLKSD 529


>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
            distachyon]
          Length = 366

 Score =  220 bits (560), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/335 (38%), Positives = 192/335 (57%), Gaps = 4/335 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L  +F DRGLL EA+TH S     VS YQRLEFVGDA L +  +  L+ +   + P
Sbjct: 34   VERLLCYQFHDRGLLEEALTHQSFGDGSVS-YQRLEFVGDAALGNAFSNFLYLTNPTIGP 92

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFNSF 1713
            G L+ LR+A ++ E  ARVAV+H L+  LR     LD  +  F++ V +EL    G   +
Sbjct: 93   GALSTLRSANISTEKLARVAVRHDLYPLLRRACPRLDLLVGQFIESVKQELEDDLGAAPY 152

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
            G    KAPKVL DIVE+IA A+++D   D   +W+V + L +P++T ET+   PV  L E
Sbjct: 153  GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVSTLHE 212

Query: 1774 RCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETA 1833
             CQ+  +  ++   + G      V++ G  VG+  + Q+ +A+  AARNAL  L      
Sbjct: 213  LCQKHGKIPQFNIWQKGGTTVANVFVSGELVGMGSSEQRTIAKLNAARNALGNLLGGAKQ 272

Query: 1834 EAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVN 1893
            +    G  +  + + G     +Q LN+ C R++WP P+++  +E GPAH ++FTY+V+V 
Sbjct: 273  QVLTTGVGHISRVEVGELRECKQKLNEQCSRKHWPKPIFKLEKEDGPAHERKFTYSVQVE 332

Query: 1894 TTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            T   G T   +G+PM  VK A++S A  +LE+L K
Sbjct: 333  T--DGGTFVTIGDPMSKVKDAENSGAQKMLEVLLK 365


>gi|357431196|gb|AET78275.1| At1g01040-like protein [Arabidopsis halleri]
          Length = 146

 Score =  220 bits (560), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 111/151 (73%), Positives = 124/151 (82%), Gaps = 5/151 (3%)

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            LTRMRQQMVSN+VLYQ+AL KGLQSYIQADRFAPSRW+APGV PVF EDTKDG SS FD+
Sbjct: 1    LTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFXEDTKDGGSSFFDE 60

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
            E+     K  +++N + +ED +MEDGELEGD SSYRVLSSKTLADVVEALIGVYYVEGGK
Sbjct: 61   EQ-----KPVSEENSDVFEDGEMEDGELEGDLSSYRVLSSKTLADVVEALIGVYYVEGGK 115

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
             A NHLMKWIGI VE DP+EV    +   VP
Sbjct: 116  IAPNHLMKWIGIHVEDDPDEVEGTVKNVNVP 146


>gi|346318518|gb|EGX88121.1| RNase3 domain protein [Cordyceps militaris CM01]
          Length = 1455

 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 200/731 (27%), Positives = 321/731 (43%), Gaps = 105/731 (14%)

Query: 266 SWEADHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLE 325
           +W ADH R   +   ++     +   ++ A+        R YQ ++ E+AKKKNTI  L+
Sbjct: 25  AWLADHARLDDDGADLSATAPSEGISETAAEISALMITPREYQNELFERAKKKNTIVVLD 84

Query: 326 TGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGH 381
           TG+GKTLIA++L+R +      D      +  A F+V KV L  QQ +V++    + +  
Sbjct: 85  TGSGKTLIAIMLLRHVLEQELEDRSNGCHRKTAFFIVDKVALCVQQYQVVKSNLPFPITK 144

Query: 382 YCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKK 441
             G++         W   FD   ++V TAQ+LL+ L H  I M+ INLLI DE HHA K+
Sbjct: 145 CYGDLQPIEQVQSHWDELFDKNMIVVCTAQMLLDCLSHGFINMKQINLLIFDEVHHAKKE 204

Query: 442 HPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK 501
           HPY+ +M  +Y   + + +P + G+TASP++    +  +D    +  LES L S + T+ 
Sbjct: 205 HPYAAIMKRYY-PRNDDAKPRILGLTASPID----TGTLDMDASVQQLESLLCSEIATVS 259

Query: 502 DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDA 561
           D              V+E     + W   EQ  Q +V   +  Q                
Sbjct: 260 DE-------------VLE-----AGWVKREQ--QEKVCFYQPPQP--------------- 284

Query: 562 GAKEELRQVYGVSERTESDGAANLIQKLRAINYA--LGE-LGQWCAYKVAQSFLTALQND 618
                ++  Y       +D A ++ Q   A++ A  +G  LG WCA++  Q  +T   N 
Sbjct: 285 -----IQNAYTELTAMVADYARHIPQLSSAVHCAAKMGSVLGPWCAHRFWQLLMT--DNT 337

Query: 619 ERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELL 678
            R       +    Y S                + DA     E+            G L+
Sbjct: 338 MRTMTLQSARSNRVYFS--------------YDRYDAVSAAFES-----------LGPLV 372

Query: 679 DSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVL 737
           + H ++              +G  + K+  L + L + ++     + ++FV+    ALVL
Sbjct: 373 NHHQLT---------TLPTDEGATSSKLTVLRETLCVAFEKNRATKCLVFVDEQYVALVL 423

Query: 738 PKVFAELPSL-SFVKSASLIGHNNSQEMRTFQMQETIAK---FRDGRVTLLVATSVAEEG 793
              F +  +  S + +  +IG + +        ++ I K   F+ G    L ATSVAEEG
Sbjct: 424 ADYFQQPGTAPSGMVADFMIGLSRASAFSNVSQRQQIMKLNNFKFGDTNCLFATSVAEEG 483

Query: 794 LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
           LDI  C++VIRFD+  + + YIQSRGRARK  S +I M+E+ N  H +  +N      +L
Sbjct: 484 LDIPACDLVIRFDMCVSAIQYIQSRGRARKASSVFITMMEQDNNQHMSRFQNVNIDALSL 543

Query: 854 RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
           R+          L    ++   +  P     V  T  + + NS V L  F  S L     
Sbjct: 544 RRFC------QSLPADRKIEKYERPPERELFVAETSTLSNQNSMVVLARF-VSTLGQGTE 596

Query: 914 SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
               PE+++      G  T ++C + LP +APF+   G +  S   A+ A    AC +L 
Sbjct: 597 KSPAPEYVVS-----GVGTNFTCWVILPDSAPFKSTSGSMERSKIKARCAAAYEACTRLI 651

Query: 974 EMGAFTDMLLP 984
           ++G+    L P
Sbjct: 652 DLGSINKNLQP 662



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 232/577 (40%), Gaps = 114/577 (19%)

Query: 1235 LEGRIVTAAHSGKR-FYVESIRYEMTAESSFP------RKEGY-LGPLEYSSYADYYKQK 1286
            +  + V   H G R F++  I   + A    P      +  GY L       Y+   KQ 
Sbjct: 833  MRQQFVVDPHDGSRKFFIYEIVPTLRATDPAPAGIPDHKNPGYQLSDKSIMQYSCSTKQP 892

Query: 1287 YGVELIF-KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
            +  +++F  +QP+ R   +S  +N L      S++ E   E   D+  Y+ L  +   I 
Sbjct: 893  HRQKIVFDTEQPVYRALLLSLRRNFL-----RSDDVEAAKE---DQPCYLTL--QCLKIS 942

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA----ASCQETF- 1400
            P+P  + R A  LPSI+  V+  L+  +    +   +P   +L+A T     A  +E   
Sbjct: 943  PIPADVARAALLLPSILYFVDCTLVVGEALQMLGLNIPLPLLLQAFTKNGVDADDEEDVK 1002

Query: 1401 ---------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
                      YER E LGD +LK   +  ++       E +    R  M+ N  L + AL
Sbjct: 1003 ADEEHGGQRNYERLEFLGDTFLKMGTTIAMYTHKTNATEFEHHVDRMLMLCNKNLLKTAL 1062

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
              GL +YI+++ F    W  P +  V  + TK                            
Sbjct: 1063 DLGLHTYIRSESFNRRTWY-PSLRLVHGKPTK---------------------------- 1093

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDA---------------AN 1556
                        +S+ + L  KT+ADV EA+IG  Y+ G  D                 N
Sbjct: 1094 ------------ASAIQNLGDKTIADVCEAIIGAAYMSGVPDGNMDEAVKAVTKMVADPN 1141

Query: 1557 HLMK-----WIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
            H M+     + G  V +     G  S  A V            +   +  +F+   LL  
Sbjct: 1142 HTMQCFADYYAGFSVPAWHASSGSASVRAAVDR----------VAGLIGYRFRSPLLLRS 1191

Query: 1612 AITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
            A TH S  +  +  YQ LEF+GDA+LD  I  HLF ++ +  P  LT+ +    +N+   
Sbjct: 1192 AFTHPSYKAEEIPDYQTLEFLGDALLDMAIVDHLFRAHPDAGPQWLTEHKMGVCSNQFLG 1251

Query: 1672 RVAVKHKLHVHLRHGSSALDRQIRDF------VKEVLEELL----KPGFNSFGLGDCKAP 1721
             + V   L   +    +A+  QIR F      +K+  E       +P    +     + P
Sbjct: 1252 YLCVSLGLQREVLAADAAVPGQIRSFEERLAYLKDAAETAAAQQGRPVSKGYWTLATRPP 1311

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            KVL D+VE++ GA+F+D+  D +VV + F+  + P +
Sbjct: 1312 KVLADVVEALIGAMFVDARYDYAVVQRFFEAFVRPHI 1348


>gi|449485333|ref|XP_004157136.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 276

 Score =  219 bits (557), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P   AR YQL+ LE+A K+NT+ FLETG+GKTLIA++L+RS  + L R+    +AVFLVP
Sbjct: 16  PLSFARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQL-RKPSPFVAVFLVP 74

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           +V LV QQAE ++  +   VG Y G+MG DFWD   W+RE +  +VLVMT  ILLN LRH
Sbjct: 75  QVVLVTQQAEALKMHSDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLVMTPAILLNGLRH 134

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASPVNLKGV 476
           S  ++  I +LILDECHHA  KHPY+ +M+EFYH   +  K   P +FGMTASP+  KG 
Sbjct: 135 SFFRLSMIKVLILDECHHARGKHPYACIMTEFYHQQLSLGKSDLPRIFGMTASPIKSKGG 194

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
           +S+++    I  LES L+S V T+    EL   VP+ +     Y +    ++L+EQL
Sbjct: 195 NSELNYWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFYIRKDIPYALYEQL 251


>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
          Length = 1629

 Score =  219 bits (557), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 186/635 (29%), Positives = 287/635 (45%), Gaps = 99/635 (15%)

Query: 289 VGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----D 344
           +G   E +     +QAR YQ ++ E+AK +N IA L+TG+GKTLIA LLIR        D
Sbjct: 79  IGNVKEQESDRIIDQAREYQEELFERAKDENVIAVLDTGSGKTLIAALLIRHFLQQELID 138

Query: 345 LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
             +        FLV  VPL  QQA  +       V    G+   D W    W R      
Sbjct: 139 RSQGKPPKTIFFLVNSVPLANQQARFLNANLPQKVIALYGDSKVDLWRRAEWNRICAENN 198

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           V+V TA +L   L H  + M  I+L++ DE HH  K HPYS ++ ++Y    ++ RP +F
Sbjct: 199 VVVCTAPVLDQCLMHGYLNMGQISLIVFDEAHHCKKNHPYSRIIRDYY-LKWQDNRPRIF 257

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-------RKELEKHVPMPSEVV 517
           GMTASPV+     S+ D    + +LES L S + T  D        +  +++   P  +V
Sbjct: 258 GMTASPVD----ESRKDIKQVVADLESMLQSKIITTNDLSVFGFAPRPADEYWIYPPPLV 313

Query: 518 VEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
            EY+ A     LH QL  +                         G  E+L+Q +  S++ 
Sbjct: 314 GEYETA-----LHAQLHPL------------------------CGFIEDLKQHFSFSKQA 344

Query: 578 ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKV 637
             D                  LG W A +V               ++  +   E  ++ +
Sbjct: 345 SRD------------------LGAWVADRV---------------WKYALPTSEHGITAI 371

Query: 638 VSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAV 697
           +S L+         +    +   ++   E     + E        +S  E+ D       
Sbjct: 372 ISKLE---------RSSTYIHAIDDAGREAALKSVREA-------ISVIENHDFGAPCLE 415

Query: 698 ADGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
            D +++PKV  L + L  +Y    + RAI+FVE+ + A  L  +F  L  L  V+   L+
Sbjct: 416 KDNELSPKVAYLRQRLKERYSSFPNTRAIVFVEQRLTAFALCDLFRVL-DLPNVRPGLLV 474

Query: 757 G-HNNSQEMRTFQMQET-IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
           G      +  +++ QE  + KFR G + L+ ATSVAEEG+DI QCN+V+RFDL KT + Y
Sbjct: 475 GISQKGIDSSSWKDQEVALEKFRVGTINLIFATSVAEEGIDIPQCNLVVRFDLYKTPIQY 534

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS 874
           +QSRGRAR  GS Y  M+E G  SH + +  A + ++ +R+   E      L   +RL  
Sbjct: 535 MQSRGRARMKGSVYAHMMEEGKQSHQSEVDYAISQDDYIRRYCQELPPDRLLGRGTRLRQ 594

Query: 875 VDAVPGTVYQVE-STGAVVSLNSAVGLIHFYCSQL 908
           + A   +    + S G V + ++++ L++ Y   L
Sbjct: 595 IIARDMSCQSFKTSAGVVANYSNSLMLLNRYAESL 629



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 185/457 (40%), Gaps = 82/457 (17%)

Query: 1341 LCFIHPLPGSLVRGA-------QRLPSIMRRVESMLLAIQLKDKINY-PVPASKILEALT 1392
            +C I P P  + R +       Q  PSI+ R+E+ L+  +  DK++   +P +  LEA T
Sbjct: 990  MCEIAPQPLEIARVSYSVAQICQLWPSILHRLEAYLIVGEAFDKLDLRQIPYNLALEAFT 1049

Query: 1393 --------------------AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
                                 A    +  YER E +GD+ LK + +  +F +     EG 
Sbjct: 1050 KDINADDEMGEMGIHSELDGTAEPTSSVNYERLEFIGDSLLKMMTTITVFNRTTCNEEGM 1109

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS-SLFD 1491
              + R +M+SN  L   A S   + Y         RW      P F    K G    L D
Sbjct: 1110 HCK-RMEMISNKRLCSVASSPEYELYRYIRAGTGDRWRDTW-YPEFLRQLKKGRVIKLTD 1167

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
            + ++ A                                L  KT+ADV EA IG   +   
Sbjct: 1168 KHRTHA--------------------------------LGKKTIADVCEATIGAC-IMTT 1194

Query: 1552 KDAANHLMKWIGIQVESD---PEEVGCPSRPACVP-----ESVLRSVDFHALEDALKI-- 1601
            +D        +GI+  +     E+    S    +P        L   D  A + A K+  
Sbjct: 1195 QDLPTSTRFDLGIKAITKLVGHEDHAITSWREILPMYKAPRWSLAMNDPVANDLARKVYH 1254

Query: 1602 ----KFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
                +FK+  LL  A TH+S  +S V   QRLEF+GDA LD +    LF +     P  L
Sbjct: 1255 VTGYRFKNPCLLRSAFTHSSDQNSPVPDLQRLEFLGDACLDWVCIWWLFRNNPTRGPQWL 1314

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE----ELLKPGFNSF 1713
            T+ + A V+N   A +AV    +  +   S AL  +I  +  +VLE    E +KP F + 
Sbjct: 1315 TEHKMAMVSNRFLAALAVILGFNRLISASSPALYAEIGTYAAKVLELYEQEDVKPDFWTR 1374

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                   PK L D+VES  GA+ +DSG D + + + F
Sbjct: 1375 VTSGSAPPKALADLVESYLGAVLVDSGFDFAEIEKFF 1411


>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Auricularia delicata TFB-10046 SS5]
          Length = 1453

 Score =  218 bits (556), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 207/741 (27%), Positives = 326/741 (43%), Gaps = 121/741 (16%)

Query: 297 EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
           E  PE + R YQ ++L ++ K+N I  LETG+GKT IAVL +R              + F
Sbjct: 3   EDAPERETRKYQEEMLNESLKRNIIIVLETGSGKTHIAVLRLRLEVERQAALGTNKASWF 62

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLN 415
           LVP V L  QQ  V+  +    VG   G +  D W  A  W++     QV+V T Q+LL+
Sbjct: 63  LVPTVALCQQQHRVLERELPCSVGLISGALQPDKWTSASVWKQVVSVNQVVVSTPQVLLD 122

Query: 416 ILRHSIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            LRH+ + +   + LLI DE HHA++ HPY+ +M EFY     + +P + G+TASP+N+ 
Sbjct: 123 ALRHAYLDLGRDVGLLIFDEAHHALRGHPYNRIMREFYDPLQPDDKPFIMGLTASPLNVD 182

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD------KAASLWS 528
            +   + C              + T ++ +EL  HV  P+   V YD      +  SL S
Sbjct: 183 TLEQNLLC------------RALTTRENEEELRAHVFPPTLKHVIYDHRPRHEQPESLQS 230

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKE--ELRQVYGVSERTESDGAANLI 586
           L    + +++  + + +      +    G  DA  +E  E R    V +R  +     L 
Sbjct: 231 LSTVYEDLDIEDDPSVRHLRHALQTPHDGPVDAVERERQEARLAKAVRKRN-TVTHETLK 289

Query: 587 QKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
           + L++      ELG W A + VA S        ++    +D   + S+            
Sbjct: 290 KLLKSALDTFYELGPWAADWFVADSV-------DKLRRPIDASQEFSFF----------- 331

Query: 646 VEGAVSKKDAKVVDSENGFVEGGTNEIEEGEL-LDSHVVSGGEHVDVIIGAAVADGKVTP 704
                   ++K    E  ++      +      L+  VV+ G                 P
Sbjct: 332 --------NSKRTTEETRYLRDILGSVRVARPSLEPDVVAAG---------------TAP 368

Query: 705 KVQSLIKILLKYQHTED-----FRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGH 758
           + Q+L+ +L+  +   +     +  IIFV    A+L+L KV +  P +        L+G 
Sbjct: 369 QTQALVDLLVDEKRAAEASGDIYSGIIFVTLRTASLLLSKVISAHPKTRDAFHVGYLVGW 428

Query: 759 NNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           +N +  R              +ET+  F +GR+ LL+ATSV EEGLD+ +CN VIRF+ A
Sbjct: 429 SNDERRRNVLDLLVGGNDKAQEETLKDFAEGRLNLLIATSVLEEGLDVARCNCVIRFNPA 488

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
             + +++QSRGRAR+  S +++M          F       E+ LR  A+ER   +  K+
Sbjct: 489 NNITSWVQSRGRARRERSSFVVM----------FSDIQDGQEQMLRWTALEREMNAKYKE 538

Query: 869 TSRLISVDAVPGTVYQ----VESTGAVVSLNSAVGLIHFYCSQLPSDRYS-------ILR 917
             R  +V A     +Q    VE TGA+++L++A   I  +C +LP   Y+       I  
Sbjct: 539 AMRERAVGAPQREEHQHYFKVEETGALLTLDNATAHISHFCDKLPHSAYARMVPIYDIFP 598

Query: 918 PEFIMERHEKPGGPTE-----------YSCKLQLP--CNAPFEKLEGP-VCSSMRLAQQA 963
           P+  ME    P  P +           + C L LP   +    K   P V  S + A++ 
Sbjct: 599 PDGFME----PLAPGQALPALKEESKLFGCTLTLPNVVSPALRKHVTPMVHPSEKAAKRQ 654

Query: 964 VCLAACKKLHEMGAFTDMLLP 984
           V   A +KL   G     LLP
Sbjct: 655 VAFEAYQKLFNAGLVNPNLLP 675



 Score =  155 bits (391), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 234/546 (42%), Gaps = 91/546 (16%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-----VPAS 1385
            K+    L P+ C +  L  ++ R +  LPSI+R ++S +L   L   +        VP  
Sbjct: 914  KSRIRILLPQFCRVDILAPAMARLSMFLPSILRDMQSAILGRDLHRHLFTTGLLSVVPLL 973

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
             +  A+T     + + Y+R E LGD  LK++ S  L   +P+ HEG LT  +  +VSN  
Sbjct: 974  DVRTAITTPLTGDAYNYQRVETLGDCVLKFLTSVQLLDMHPEWHEGYLTMKKDHIVSNSN 1033

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            L + A    L  +I  DR    +W  P  L    + + D D           ED    +K
Sbjct: 1034 LAREAKRNKLALWIIRDRMVAKKW-QPQYLTALPDTSMDVDPP--------TEDPPAKEK 1084

Query: 1506 NYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
            + N                     LS+K LADVVE+LIGV +  GG DAA  +++ +GI 
Sbjct: 1085 DENVPR------------------LSTKVLADVVESLIGVAHENGGYDAAVDMLRRLGIG 1126

Query: 1566 VESDPEEVGCPSR-----------PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAIT 1614
               + E      R           P   PE  +R+     LE  L  +F+   LL EA+T
Sbjct: 1127 QSMELEWKTVADRVHSIVNRIEPLPHGYPEDYVRT-----LEQMLGHRFEHPSLLFEALT 1181

Query: 1615 HASRPSS-GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE----- 1668
            HA+         Y+RLEF+GD++LD+++T+ ++ S   LPP  +T  R A VN E     
Sbjct: 1182 HANYTGDVHTVSYERLEFLGDSLLDNVVTEQVYHSPRRLPPVLMTRCRIATVNTEMLAYC 1241

Query: 1669 -----------------------NFARVAVKHKLHVHLRHGSSALDRQIRDF------VK 1699
                                    F   +   +L   +R  + A+   +RD+      V 
Sbjct: 1242 CANLSTEQQHMTVQRAPDRPEGATFVPTSRTVRLPTFIRMSNVAMVGVVRDYIAGYERVH 1301

Query: 1700 EVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----P 1752
            E + E    G  F    L + +APK LGDIVES+  AI+LD+    + V +  +     P
Sbjct: 1302 ERIAERFAHGREFPWTDLFELRAPKFLGDIVESLIAAIYLDTRGSMAAVERFIERLGILP 1361

Query: 1753 LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKAS-RSGNLATVEVYIDGVQVGVAQNPQ 1811
            +L  ++       HP+  L E   +    L+Y  S + G   +  +Y++   +   Q   
Sbjct: 1362 VLRHLIDDRVDVRHPLTVLGEYAAKSQGKLKYVFSVQDGATLSCGIYLNEQLIVSMQGDN 1421

Query: 1812 KKMAQK 1817
            +++  K
Sbjct: 1422 RELRAK 1427


>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
 gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
          Length = 2254

 Score =  218 bits (555), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 172/536 (32%), Positives = 253/536 (47%), Gaps = 85/536 (15%)

Query: 1378 INYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+ +
Sbjct: 1714 VGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYMTYENVHEGKLSHL 1773

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFDE- 1480
            R + V+NL LY+    K L  Y+ A +F P   W  P                +P     
Sbjct: 1774 RSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWK 1833

Query: 1481 -----DTKDGDSSLFDQ---EKSVA--------EDKLGTDKNYNEYEDDDMEDGELEG-- 1522
                 D K+ +S    +   EK+VA        +  +      N   DD  E  +     
Sbjct: 1834 LADLLDIKNLNSVQICELVREKAVALGLAAGTEQPAIAQQMTPNANLDDSNETNDFSCFI 1893

Query: 1523 --DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------ESDPE 1571
              +  S   +  K++AD VEALIG Y +E G   A   M W+G++V           D  
Sbjct: 1894 PYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLVPTAADDER 1953

Query: 1572 EVGCPSRPAC-----------VPESVLRSV-------------DFHALEDALKIKFKDRG 1607
                 S+P              P S L                 F   E +L  KF+DR 
Sbjct: 1954 RAPGTSKPNAKNMVTIYGAWPTPRSPLLHFAPNATVELEHLLSGFEEFEASLGYKFRDRS 2013

Query: 1608 LLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VN
Sbjct: 2014 YLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVN 2073

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFGLGDC 1718
            N  FA +AV+H  H + RH S  L+  I  FV+   E          L          D 
Sbjct: 2074 NTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEECDDAEDV 2133

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQ 1776
            + PK LGD+ ESIAGAIFLDS     VVW+V+  ++ P +     ++P  P+REL E   
Sbjct: 2134 EVPKALGDVFESIAGAIFLDSDLSLDVVWRVYSNMMKPEIEQFSNSVPKSPIRELLELEP 2193

Query: 1777 QQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2194 ETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2247



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 19/149 (12%)

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
            ST A V L++A+ L++ YC++LPSD ++ L   +     E+ G    Y   L+LP N+P 
Sbjct: 819  STAASVDLSTAIALVNKYCARLPSDTFTKLTALWRCASSERQGIKL-YQYTLRLPINSPL 877

Query: 947  E-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------E 990
            +  + G    +  LA++     AC +LH++G   D L P    G               E
Sbjct: 878  KYDIVGLPMPTQTLARRLAAFQACVELHKIGELDDQLQPIGKEGFRALEPDWECFDLEPE 937

Query: 991  QQEKVDQNDEGEPLPGTARHREFYPEGVA 1019
             ++ V QND  EP PGT + R++Y + +A
Sbjct: 938  DEQIVQQND--EPRPGTTKRRQYYYKRIA 964



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 13/131 (9%)

Query: 715 KYQH--TEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNS 761
           +YQH  +E   A+I+  +   A VL ++ AE+    P L F++        A+       
Sbjct: 484 RYQHDSSETLCALIYCNQNHTARVLFELLAEMSKRDPDLKFLRCQYTTDRIANPATEPKE 543

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
            E    + +E + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRA
Sbjct: 544 AEQEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRA 603

Query: 822 RKPGSDYILMI 832
           R   + +I+++
Sbjct: 604 RAAPAYHIMLV 614



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KY + +    QPL+     S   
Sbjct: 1153 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYNLTIQNTAQPLLDVDHTSARL 1205

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1206 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1263

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1264 CILYRINGLLLADDIRKQVS 1283



 Score = 45.8 bits (107), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 67/322 (20%), Positives = 126/322 (39%), Gaps = 51/322 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A ++NTI  L   + K  IA+ L++       R+N KM           V
Sbjct: 18  RDFQVELLASAFERNTIICLGHKSSKEFIALKLLQEFSRR-GRRNGKMS----------V 66

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK----------QVLVMTAQILL 414
           Y  +++  E T          M     D + WQ + D +           V +   +  L
Sbjct: 67  YLSSQIDAEATSMYT------MLTHLTDLKVWQEQPDQQVPLNHCWADYHVSIHKPESFL 120

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            +L++  I + ++ L++L++CH +        +  EF        RP + G+ A P++  
Sbjct: 121 ILLQNRDILLSSVQLIVLEDCHDSAVYRSVLPIFEEFVQPAKPCDRPRILGL-AGPLHSA 179

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
           G   +   A+ +  LE  +   + T  D   + ++   P E +V+           +QL 
Sbjct: 180 GCELEELNAM-LNTLEQHMLCSIETASDIVTVLRYCARPLEYIVQCAPFEV-----DQLS 233

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE-----SDGAANLIQKL 589
            + V +    +S     ++               ++YG  +  E      D   + +  L
Sbjct: 234 SVLVDILTTHKSFLNDHRYDPF------------EIYGTDQFMEDLKDIPDPKLDPLNVL 281

Query: 590 RAINYALGELGQWCAYKVAQSF 611
            A+   L E+G WCA + A  F
Sbjct: 282 DALLAVLLEMGPWCAQRAAHHF 303


>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
          Length = 1649

 Score =  218 bits (554), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 162/488 (33%), Positives = 251/488 (51%), Gaps = 50/488 (10%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            ++++ALT+AS  + F  ER E LGD++LK + S +L++ Y +  EG+LT+++ +++ N  
Sbjct: 1162 EVVQALTSASSNDIFNLERLETLGDSFLKLMASLYLYMHYLRLDEGKLTQVKGKLIGNRN 1221

Query: 1446 LYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKD-------GDSSLFDQEKSVA 1497
            LY   +++ L  Y++   F P S W APG+    D + +          + L++      
Sbjct: 1222 LYYCGINQKLGGYMKVHDFVPTSDWIAPGI--CVDREIQQLMRAMNVSPNFLYELVLPPN 1279

Query: 1498 EDKLGT-DKNYNEYEDDDMEDGELE--GDSSSY------RVLSSKTLADVVEALIGVYYV 1548
            E   G   +N  E     + D  ++  G  SS       R ++ KT+AD VEALIG Y  
Sbjct: 1280 EQMSGVLSENTKEIIRQKLTDANVDKSGIHSSMENFLAVRAVADKTIADGVEALIGAYLK 1339

Query: 1549 EGGKDAANHLMKWI---------GIQVESDPEEVGCPSRPACVPESVLRSVDFH---ALE 1596
              G   A  L+ W+         G  +++ P       R    P  +   +  H   A+E
Sbjct: 1340 GSGIRGALRLLTWLKILPSEALPGALLDTQPPTADVKMRDHNQPGDIYVLLSIHECMAIE 1399

Query: 1597 DALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
            + L+  FKDR  L++A+THAS  P+    CYQRLEF+GDA+LD LIT H++ S   L PG
Sbjct: 1400 NILQYTFKDRSYLLQALTHASYTPNRVTECYQRLEFLGDAILDFLITCHIYESCGELTPG 1459

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-----------EVLEE 1704
             LTDLR++ VNN  FA + V++  H  +++ S+ L   +  FVK           EVL  
Sbjct: 1460 ELTDLRSSLVNNVTFASLTVRYGFHKFMKYTSTRLMDMVDRFVKFQEDNGHSINEEVLIL 1519

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP--ET 1762
            L +   N     D   PKVLGD+ ESIAGAI+LDSG +   VW+V+  L+   +    + 
Sbjct: 1520 LEETETNIAEAID--VPKVLGDLFESIAGAIYLDSGMNLKEVWRVYYRLMRKEIRTFSKE 1577

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKM-AQKLA 1819
            +P  PVR L E    + E L+ +   + N  + TV++ +DG +         K+ A++ A
Sbjct: 1578 VPKQPVRLLYENAPHRPEFLKSRLIDNSNVVMVTVKLLVDGKRRYFHGFGNTKLQAKRAA 1637

Query: 1820 ARNALAVL 1827
            A+ AL  L
Sbjct: 1638 AKCALKSL 1645



 Score =  165 bits (417), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 134/232 (57%), Gaps = 6/232 (2%)

Query: 294 EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKML 353
           E +E   + +ARPYQ  ++ QAKK+N+I +L TG+GKT IAV+LI+ +   L+       
Sbjct: 2   EGEEGQDDFRARPYQEVLMNQAKKRNSIIYLPTGSGKTYIAVMLIKELSGALELGKH--- 58

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V LV QQAE I+  T Y VG Y G+M  DFW   +W++E +  Q++VMT QI 
Sbjct: 59  TFFMVNTVALVNQQAEYIKRHTHYSVGEYSGDMNVDFWTRDKWEQELNKHQIMVMTCQIF 118

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           ++IL   ++K++ +NLLI DECHHAV   P   VM  F      +++P V G+TA+ +N 
Sbjct: 119 VDILSFGVVKLQNVNLLIFDECHHAVNDQPMRQVMQHF-ERCPIQQQPRVLGLTATLLNK 177

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAAS 525
               S V  A ++  LE+   S V T ++  E+      P E+ V + +  S
Sbjct: 178 N--CSAVKVANEVKKLETTFQSTVATCENMDEVCFFATNPIELTVTFKEGCS 227



 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 232/506 (45%), Gaps = 93/506 (18%)

Query: 705  KVQSLIKILLKY--------------------QHTEDFRAIIFVERVVAALVLPKVFAEL 744
            KV +LI+I+ KY                    +  E F  ++FVER   A V+  +  EL
Sbjct: 361  KVLTLIEIIKKYVPPDIAISPEDADCNTDSLQRKKEKFCTLVFVERRFTAKVVYWILEEL 420

Query: 745  ----PSLSFVKSASLIG--HNNSQEMRTFQMQ-----ETIAKFRDGRVTLLVATSVAEEG 793
                     +    ++G  +N   + R   +Q     + + +F+ G   LLVA++V EEG
Sbjct: 421  CKVDADFQHISPDFIVGFNYNPFNDTREGALQRNWCYDCLNRFQTGEKNLLVASNVLEEG 480

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            +DI++CN+V++FDL     +Y+QS+GRAR   S YILM+   + +  +     + +E+ +
Sbjct: 481  MDIQKCNLVVKFDLPLNYRSYVQSKGRARHRTSHYILMVPSSDNTFMSKYEEYKATEKAI 540

Query: 854  RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRY 913
             +  + RT+      +  LI+       V    ++ + V+L SA+ L+H YC+ LP D++
Sbjct: 541  ERLLVGRTE-EREGPSEELIAKTLYDQLVPPYRTSKSSVNLVSAIPLLHRYCNMLPQDKF 599

Query: 914  SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKL 972
            ++L P + M    KP         LQLP N+P  E +EG    + +L++++  L ACK+L
Sbjct: 600  TVLAPIWYMAETTKP------KICLQLPMNSPLTELIEGQEMDNRKLSKRSAALEACKRL 653

Query: 973  HEMGAFTDMLLPDKGSGEQQEKVD---------QNDEGEPLP----GTARHREFYPEGVA 1019
            H+MG  TD LLP   +G +   +D         ++DE E L     G+   +++YP    
Sbjct: 654  HQMGELTDSLLP---TGRESAVLDSSDLFPLYVEDDETEELDTAPRGSKNRKQYYPIQFP 710

Query: 1020 DILQG----------------EWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQV 1063
            D L                  E + S         +F+  + +V+     I     + ++
Sbjct: 711  DFLSNCRPKPNVDSFLHVIVMEPVYSKPTDNNRKLVFYNLLDSVESF--AILSSKPMPEI 768

Query: 1064 SDFAVL---------------FSSELDAELASLKNFHVRLMSIVLDVDVEPYTT--PWDP 1106
             DF +                F    + E+ASL+ F++ +   +L + ++P+      + 
Sbjct: 769  CDFPIYMNVGELIVHVQQNDKFYRLTEEEVASLEVFNIMIFRQILKL-MKPFMIIDKENL 827

Query: 1107 AKAYLFVPVVSDKSVDPMNELDWDLV 1132
              +Y  VP   D   + ++E+DWD+V
Sbjct: 828  ENSYFMVPTRIDS--NGVHEIDWDVV 851



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 12/132 (9%)

Query: 1250 YVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKN 1309
            Y+ +    +T  S FP  +       Y+SYADYY +KY +E++   QPL+  + +S   N
Sbjct: 896  YIVTQITSLTPSSPFPSND-------YTSYADYYDKKYKLEIVKVDQPLLEVKAISNKIN 948

Query: 1310 LLSPR---FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVE 1366
             L PR     HS  +    E  L + +   L  ELC     P  L   A  LP+I+ R+ 
Sbjct: 949  CLRPRGNKVSHSTSKRKRHE--LQEDFEENLIGELCMRFQFPSVLWLKATCLPTILHRIN 1006

Query: 1367 SMLLAIQLKDKI 1378
             +LLA +L+ KI
Sbjct: 1007 HILLAEELRQKI 1018


>gi|255548083|ref|XP_002515098.1| hypothetical protein RCOM_1340700 [Ricinus communis]
 gi|223545578|gb|EEF47082.1| hypothetical protein RCOM_1340700 [Ricinus communis]
          Length = 373

 Score =  218 bits (554), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 175/354 (49%), Positives = 210/354 (59%), Gaps = 48/354 (13%)

Query: 1   MEGETRVSDIVGGGESNQSSYWLDACEDI---LIDEFVNFDTSVVQDSV--DNTSNQDSL 55
            EGE+RVS  VGGG    +SYWLDACEDI   LID  V+FDTS+VQDSV  D+TSNQD L
Sbjct: 2   TEGESRVSGTVGGG--GDTSYWLDACEDISCDLIDNLVDFDTSIVQDSVVVDDTSNQDHL 59

Query: 56  SNDFFGGIDHILDSIKNGSGLP--------NSNGNLL---------KNGSEDSTGGEN-H 97
            NDFFGGIDHILDSIKNGSGLP         SN N L           G +D   GE   
Sbjct: 60  VNDFFGGIDHILDSIKNGSGLPPLSDTINNYSNSNSLTTAVAVVGNNGGIQDCNVGEGWF 119

Query: 98  QAEGLILLSN---------NGSDKDGVDRKRKLENCENVNGYLVNGKAGGRLS--DHFTK 146
             E   + +N         NGSDK+ ++ K +LE  +N    LV G+   RL+  D+  +
Sbjct: 120 TNEAADVCTNGVQSSSLHLNGSDKN-IESKGQLEIFDNGLSLLV-GEGEERLNLLDNSVR 177

Query: 147 ENGVHRDNGNNDHEASRIRDFDSEDRFSKRARVSVCKNESQYSSRGQYCSSDKDRVFGRK 206
           ENG          E  R RD DS+ R  KRAR++  KNE QYSSRGQY + D+DR   RK
Sbjct: 178 ENGSR-------GEGQRERDIDSDVRSCKRARITSYKNERQYSSRGQYDARDRDRSSNRK 230

Query: 207 -RLRDLDDIGRRDRDPMRRREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLG 265
                 D   R      RR  +  G  R+D +D+D RDREPRGYWERDR GS+ MVFR+G
Sbjct: 231 RLRDWDDIDRRDRDYLRRRDRYGGGGGRRDGKDRDLRDREPRGYWERDRSGSSEMVFRVG 290

Query: 266 SWEADHNRAGKEANGINQECNG-KVGKKSEAKEKMPEEQARPYQLDVLEQAKKK 318
           +WEAD N+ GKE NG +QE NG    K  E KEK+PEEQAR YQLD  E  +++
Sbjct: 291 TWEADRNK-GKEVNGKDQESNGKAEKKVEETKEKIPEEQARQYQLDQAEVIRER 343



 Score = 44.3 bits (103), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 18/20 (90%), Positives = 19/20 (95%)

Query: 367 QAEVIREQTGYVVGHYCGEM 386
           QAEVIRE+TGY VGHYCGEM
Sbjct: 336 QAEVIRERTGYQVGHYCGEM 355


>gi|336373452|gb|EGO01790.1| hypothetical protein SERLA73DRAFT_85682 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1354

 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 183/613 (29%), Positives = 290/613 (47%), Gaps = 67/613 (10%)

Query: 1247 KRFYVESIRYE---MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVE-LIFKKQPLIRGR 1302
            +R+YV   R +   M+  +  PR+  Y   LEY        ++ G++ L+ ++QPLI   
Sbjct: 686  RRYYVVKTRPDLSPMSKPADSPREAAYPNLLEYCK-----SRRKGLDCLVDQEQPLIEVS 740

Query: 1303 GVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIM 1362
                  N LSP F           +        +L PELC    +P S +R A  LPSI 
Sbjct: 741  KTPGLSNHLSPTFRPLTTSAKASAK--------YLIPELCAKLTIPASTLRTALLLPSIS 792

Query: 1363 RRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELL-GDAYLKWVVSRF 1420
            RR++ +L+  +L  K  N+ +    +L A++  S    + YER E+L GDA+LK++ S +
Sbjct: 793  RRIDDILIVKELNAKFFNHHITEELLLAAISTPSAGFDYDYERLEVLAGDAFLKYLSSIY 852

Query: 1421 LFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP--GVLPVF 1478
            +F+  P K+EG L   RQQ++SN  L + A + GL  +IQ+  F+   W  P   ++ + 
Sbjct: 853  VFVTNPAKNEGALHVSRQQIISNKALLKTACTVGLPPFIQSRPFSYKVWQPPNFSLVSIR 912

Query: 1479 DEDTKDGDSSLFDQEKSVA-----EDKLGTDKNYNEYEDDDMEDGE-LEG---------- 1522
            ++ T + D+    +  S +     E +   +    + E +D   G+ L G          
Sbjct: 913  EDFTPNDDTKKISKAPSQSPLARKETEAIMEAPPKKIESEDSVKGKALPGSHASSKKENR 972

Query: 1523 ---DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
               D+   + L  K +ADVVEA+IG  Y+ GG+D A    K + I +  + E      R 
Sbjct: 973  GQQDTQYTQWLGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDIPIR-NIEHWADFGRK 1031

Query: 1580 ACVP----ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDA 1635
            A  P     + LR     A+E  +  KF    LL +A+THAS      +CY+RLEF+GDA
Sbjct: 1032 ALTPPPRVTAKLRDGSIEAVETIIGHKFAYPHLLAQALTHASVQGYQSTCYERLEFIGDA 1091

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            +L+ ++ +H+F     + PG LT ++ A V+N   A V V   LH H+ + S  L   I+
Sbjct: 1092 ILEFMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLHEHILYESFPLAGNIQ 1151

Query: 1696 DFVKEV-----------LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
             ++ E+             E   PG   F L D + PK L D+VESI GAI++  G    
Sbjct: 1152 GYIDELKKKQTEEYELAAREQRTPG--QFWL-DVEPPKALSDVVESIIGAIYISDGFQPI 1208

Query: 1745 VVWQVFQPLLDPM----VTPETLPMHPVRELQERCQ----QQAEGLEYKASRSGNLATVE 1796
                VF  +L P     +T +TL  HP + + E  +    Q  E ++ + +    L   E
Sbjct: 1209 GSELVFNNILKPFYNKHITLKTLSHHPTKVILELLEAHGCQSFEIVKKEDTNQPGLTCCE 1268

Query: 1797 VYIDGVQVGVAQN 1809
            + I  V +  A +
Sbjct: 1269 IVIHDVILAAATD 1281



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 189/470 (40%), Gaps = 85/470 (18%)

Query: 702  VTPKVQSLIKILLKYQHT-EDFRAIIFVERVVAALVLPKVFAELPS-LSFVKSASLIGHN 759
            VTPK   L++IL   Q    DFR I+ V++   AL +  +     + L F++  +LI  +
Sbjct: 186  VTPKFAKLVQILKSCQILGSDFRGIVIVQKRAVALAIVDLLRNSDNGLGFLRPYALISTS 245

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            +      +   ET  KF  G   LLV T  + E LDI   ++VI++DL ++ L+YI +  
Sbjct: 246  D-----FYHQDETCRKFSLGTHNLLVITK-SNEDLDISASSLVIKYDLFESQLSYIYAWC 299

Query: 820  RARKPGSDYILMIERGNLSH-------ATFLRNARNSEETLRKEAIERTDLSH-LKDTSR 871
               +  S  + M E+G+ +H        +F +  R S E   KE   R  L H L+DT  
Sbjct: 300  HTGRCHSYLVHMAEKGDETHRRILSELTSFSQENRTSIEKF-KEYRGRFLLPHKLEDT-- 356

Query: 872  LISVDAVP------GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP----EFI 921
            + S D+            +   T   + L  A   ++    +L +  Y + +P     F 
Sbjct: 357  IHSYDSQTEDEGEKSVSLKDPVTSNRICLRDATSTVY----RLAAAMYDVEKPFDVELFR 412

Query: 922  MERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
            + +H    G   YSC + LP +       G  C +   A+++ C   C +L   G     
Sbjct: 413  INKHLDEQGSWTYSCNVMLPAHPTLRVFTGSSCPTPADARRSACYYTCTELFNAGVLDYR 472

Query: 982  LLPDK---------GSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRD 1032
            L P +            E+ +K   N  G+  P        YP                 
Sbjct: 473  LFPQQRLKPARFLEDDFEEPKKNMSNKNGQATPN-----HLYPRRKPAFWSN-------- 519

Query: 1033 GCTGSKLFHLFMYTVKCVNNGISKDPF----------LTQVSDFAVLFSS---------- 1072
              + + +F+  +Y V    +G S D +          L ++ DF + FS           
Sbjct: 520  --SLTAVFNDTLYPVMVALSGFSPDQYAPVLLLTRHPLPRMHDFKLFFSGISAPLHLAWG 577

Query: 1073 ---ELDA-ELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSD 1118
               E+D  +LA L  + +R+  IV +   +P+  P +   AY + P+ SD
Sbjct: 578  GPLEVDQNQLALLHQYTLRICRIVAN---KPFACPLN-EMAYFYAPLKSD 623


>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
 gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
          Length = 2250

 Score =  217 bits (553), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 168/538 (31%), Positives = 257/538 (47%), Gaps = 85/538 (15%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1708 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1767

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------------- 1472
             +R + V+NL LY+    K L  Y+ A +F P   W  P                     
Sbjct: 1768 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTQH 1827

Query: 1473 -GVLPVFD----------EDTKDGDSSLF---DQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
              ++ + D          E  ++   SL      E+  A  +L  + N ++  + +    
Sbjct: 1828 WKLVDLLDIKNLSSVQICEMVREKAESLGLVGSVEQPAAAQQLTHNANLDDSNETNDFSC 1887

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---ESDPEEVGC 1575
             +  +  S   +  K++AD VEALIG Y +E G   A   M W+G++V   + +P     
Sbjct: 1888 FIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLEPTAAAI 1947

Query: 1576 PSR-PACV----------------PESVLRSV-------------DFHALEDALKIKFKD 1605
              R P                   P S L                 F   E +L   F D
Sbjct: 1948 EQRMPGSTKPDLNNMITVYGDWPTPRSPLLHFAPNANAELEHLLSGFEEFESSLGYTFSD 2007

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            R  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A 
Sbjct: 2008 RSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSAL 2067

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNSFGLGDC---- 1718
            VNN  FA +AV+H  H + RH S  L+  I  FV+   E   ++   +      +C    
Sbjct: 2068 VNNTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHIISEEYYLLSEEECDDAE 2127

Query: 1719 --KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQER 1774
              + PK LGD+ ESIAGAIFLDS     VVWQV+  ++ P +     ++P  P+REL E 
Sbjct: 2128 DVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMKPEIEQFSNSVPKSPIRELLEL 2187

Query: 1775 CQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
              + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2188 EPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2243



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 19/149 (12%)

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
            STGA V L++A+ L++ YC++LPSD ++ L   +   R  +  G   +   L+LP N+P 
Sbjct: 811  STGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCARSVR-QGVVLFQYTLRLPINSPL 869

Query: 947  EK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------E 990
            +  + G    +  LA++     AC +LH++G   D L P    G               E
Sbjct: 870  KHDIVGLPMPTQTLARRLAAFQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPE 929

Query: 991  QQEKVDQNDEGEPLPGTARHREFYPEGVA 1019
             +  V QND  EP PGT + R++Y + +A
Sbjct: 930  DEHIVQQND--EPRPGTTKRRQYYYKRIA 956



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1145 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTAQPLLDVDHTSARL 1197

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1198 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1255

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1256 CILYRINGLLLADDIRKQVS 1275



 Score = 63.9 bits (154), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 11/129 (8%)

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQE 763
           ++  +E   A+I+  +   A VL ++ AEL    P L F++        A         E
Sbjct: 478 QHDTSETLCALIYCNQNHTARVLFELLAELSRRDPDLKFLRCQYTTDRVADPATEPKEAE 537

Query: 764 MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
               + ++ + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR 
Sbjct: 538 QEHRRQEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARA 597

Query: 824 PGSDYILMI 832
             + +I+++
Sbjct: 598 APAYHIMLV 606



 Score = 45.8 bits (107), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 64/327 (19%), Positives = 126/327 (38%), Gaps = 61/327 (18%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R +Q+++L  A ++NTI  L   + K  IA+ L++ +    +R  K             V
Sbjct: 18  RDFQVELLASAFERNTIICLGHRSSKEFIALKLLQELSRPGRRNGKVS-----------V 66

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK----------QVLVMTAQILL 414
           Y  +++  E T          M     D + WQ + D             V +      L
Sbjct: 67  YLSSQIDAEATSMYT------MLTHLTDLKVWQEQPDQHVPSNHCWTDYHVSIHKPSTFL 120

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           ++L+   + + +I L++L++CH +        +  +F        RP + G       L 
Sbjct: 121 SLLQSGDLLLSSIQLIVLEDCHDSSVYRSILPIFEDFILPAKPSDRPRILG-------LA 173

Query: 475 GVSSQVDCAIKICN-----LESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
           G     DC ++  N     LE ++   + T  D   + ++   P E +V+     + + +
Sbjct: 174 GPLHSADCELEELNAMLDTLEQQMLCRIETASDIVTVLRYCAKPHEYIVQ----CAPFEM 229

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE-----SDGAAN 584
            +QL ++ V +    +S        F+    +  + +  ++YG  +  E      D   +
Sbjct: 230 -DQLSRVIVDILTTHKS--------FL----SDHRYDPFEIYGTDQFMEDLKDIPDPKLD 276

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSF 611
            +  L  +   L E+G WC  + A  F
Sbjct: 277 PLNVLDGLLAVLHEMGPWCTQRAALHF 303


>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
 gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
          Length = 377

 Score =  216 bits (551), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 193/335 (57%), Gaps = 4/335 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L+ +F DR LL EA+TH S  S G   YQRLEFVGDA L    +  L+ +   L P
Sbjct: 45   VERLLRYQFCDRALLEEALTHQSF-SDGAFSYQRLEFVGDAALGLAFSNFLYLTNPTLGP 103

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFNSF 1713
            G L+ LRAA ++ E  ARVAV+H L+  LR   + LD  +  F++ V +E++       +
Sbjct: 104  GALSTLRAANISTEKLARVAVRHDLYPLLRRKCARLDLLVGQFIESVKQEVMHDLATAPY 163

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
            G    KAPKVL DIVE+IA A+++D   D   +W+V + L +P++T ET+   PV  L E
Sbjct: 164  GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPVITAETVDEQPVTTLHE 223

Query: 1774 RCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETA 1833
             CQ+  +  +++  + G +  V V++ G  VG+  + QK +A+  AAR+AL  L      
Sbjct: 224  LCQKHGKVAQFETWQKGGMTMVNVFVGGEMVGLGSSEQKVIAKLNAARDALGKLIGGAKQ 283

Query: 1834 EAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVN 1893
            +    G  NG   +       +Q L + C+ ++WP P+++  +EGGPAH + F  +V+V+
Sbjct: 284  QVLINGIANGLVDEIVELRECKQKLTEQCIGKHWPKPIFKLEKEGGPAHERNFVCSVQVD 343

Query: 1894 TTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            T  K  T   +G+PM  VK A++SAA  ++ELL K
Sbjct: 344  T--KTGTFVTIGDPMSRVKDAENSAAQKMVELLLK 376


>gi|168039661|ref|XP_001772315.1| dsRNA-specific nuclease dicer and related ribonuclease
           [Physcomitrella patens subsp. patens]
 gi|162676302|gb|EDQ62786.1| dsRNA-specific nuclease dicer and related ribonuclease
           [Physcomitrella patens subsp. patens]
          Length = 566

 Score =  216 bits (551), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 246/500 (49%), Gaps = 69/500 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ++ LE+AKK++ I +LETG GKT +AV+L++ I  DL R+    +AVFL P VPLV
Sbjct: 92  RGYQIEALERAKKEDIIVYLETGCGKTHVAVMLLQHIA-DLIRKPSTRIAVFLCPSVPLV 150

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQA V++  T + VG Y GE+  + W+++ W+ E +  ++ VMT  ILL+ L H  ++M
Sbjct: 151 QQQARVVKRYTNFKVGEYYGEVNNNAWNSKAWEAELENTEIFVMTPAILLHNLHHCFMRM 210

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-PSVFGMTASPVNLKGVSSQVDCA 483
           + I LLI DECHHA   HPY+ +M EFYH      R P + GMTASP+N K V+ Q D  
Sbjct: 211 DCIELLIFDECHHAHSHHPYANIMQEFYHGKEDLYRLPRILGMTASPINGK-VNCQGDSI 269

Query: 484 -IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
             KI  +E  L + + T+K+  EL+  VP P      Y+ A +   +  +  Q+   +++
Sbjct: 270 RTKIDKIERMLHAKLHTVKESSELDLVVPRPHHKSEYYESAQTPNPVTLKFCQLLFDLQK 329

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
               +        +G   +G + EL  +  +    E     N+ +   ++ Y   ELG  
Sbjct: 330 ECIGT-------LLGT--SGCEGEL--LGELCSGVEKKRVKNVKKLCNSLGYCATELGPR 378

Query: 603 CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA--KVVDS 660
           CAY+  +  L    +D                         EL   +  KKD   K++++
Sbjct: 379 CAYEAVKILLHKYDSD----------------------CDPELDSNSEGKKDMLRKILNA 416

Query: 661 ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG-----KVTPKVQSLIKILLK 715
            N F+   + E+E                      AV DG      ++ KVQ LI +L +
Sbjct: 417 LNSFL---SKEVEA------------------TSCAVPDGAANIQNLSSKVQLLINVLER 455

Query: 716 YQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNN-SQEMRTFQMQETI 773
            + T + R IIFVER +   VL  + + +  LS   +  SL G N+ S +M     Q  +
Sbjct: 456 CRDTNEMRCIIFVERKITTRVLASLLSSIEVLSPAFRFQSLAGKNSGSNDMNHKHQQNVV 515

Query: 774 AKFRDGRVTLL--VATSVAE 791
             FR+G V ++  VA  + E
Sbjct: 516 ESFRNGEVGIIGVVAAKLCE 535


>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
          Length = 1500

 Score =  215 bits (548), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 197/684 (28%), Positives = 318/684 (46%), Gaps = 102/684 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS-ICNDLQRQ---NKKMLAVFLVPK 360
           R YQ+++ E+AK++N +  L TG GKTLI+ LL+R  +  +L+ +     K +A FLV K
Sbjct: 82  REYQIELFERAKERNLLVVLPTGTGKTLISALLLRHHLEQELEARAIGKLKKVAFFLVEK 141

Query: 361 VPLVYQQAEVIREQTG-YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V L  QQ  V+    G + V  + G M       + W  +F    V+V TAQILL+ L  
Sbjct: 142 VALCVQQHAVLSCNLGAHPVTKFVGHMKGMTKTKEYWDEKFGENMVVVCTAQILLDCLTC 201

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
             I M  INLLI DE HH  KKHPY+ +M  +Y     EK P + GMTASPV+ +    +
Sbjct: 202 GFITMSRINLLIFDEAHHTKKKHPYARIMDGYYCKHEGEK-PRILGMTASPVDARTKDVR 260

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVA 539
            D A++   LE  LDS + TI D            EV++E        ++H + KQ E  
Sbjct: 261 -DTALE---LERSLDSQIATISD------------EVLME--------TMHRK-KQTEET 295

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           V            +  + A D        Q++ +  R E          L     A   L
Sbjct: 296 V-----------NYSRLEAPDDTKTHLWEQIFALVSRNE-----QFKLTLEFTKEASSVL 339

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G WCA +  +  +T L+ +     +L  +    ++   +++ + +L   AV ++  ++V 
Sbjct: 340 GTWCADRYWELAMTDLETE-----RLAARTSREFIGD-IAVTRADLATEAV-RRVQEIVQ 392

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHT 719
           +      G  +   EG                          ++ KV+SL +I L +  T
Sbjct: 393 AHKF---GAIDPKAEG--------------------------LSAKVKSLHEI-LSHAFT 422

Query: 720 ED--FRAIIFVERVVAALVLPKVFAE----LPSLSFVKSASLIGHNNSQEMRTFQMQE-T 772
            D   R I+FVE+   A +L  ++++    +P +S          N+S    +F+ Q   
Sbjct: 423 MDGTKRCIVFVEKRYTARLLSDLYSQPSMRIPGMSASYMVGCQSTNSSFGTMSFREQVLA 482

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +F+ G    L  T VAEEG+D+  C++VIRFDL  +V+ Y+QS+GRAR+  S YI M+
Sbjct: 483 LHEFKRGNTNCLFTTPVAEEGIDVPDCDLVIRFDLYNSVIQYLQSKGRARQARSRYITMM 542

Query: 833 ERGNLSHATFLRNARNSEETLRKEAI----ERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
           E GNL+H    + A    + L K  +    +R     L D    + V+ +   VY++ ST
Sbjct: 543 EEGNLTHIRSAKQALRDSQALEKFCLPLSADRKLHDDLIDEDMEMMVERMQHQVYEIPST 602

Query: 889 GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
           GA ++  +++ ++  + S L +  Y+ +  +      +K G    Y   + +P  +P   
Sbjct: 603 GARLTFPASLEILARFVSHLSTGSYAKVEYQV-----QKVGD--RYLADVVMPLQSPVNF 655

Query: 949 LEGPVCSSMRLAQQAVCLAACKKL 972
           ++G    S  LA+ +    ACK L
Sbjct: 656 VKGTQQRSKLLAKCSAAFEACKIL 679



 Score =  150 bits (380), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 236/543 (43%), Gaps = 92/543 (16%)

Query: 1274 LEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
            ++YS+ + YYK +  V+     QP+++   +S  +NLL          E E +E ++   
Sbjct: 916  MQYSN-SLYYKSRQRVKW-RDDQPVVKAELLSLRRNLLD---------EFEVDEKVNMEC 964

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
            ++ L P    + PLP  +V  A   P+I+ R++S+L+ +   + ++  +P    LEA+T 
Sbjct: 965  FIILEP--LHVSPLPIDVVSMAMAFPAIIHRIDSVLIVLDACNLLDLEIPPELALEAMTK 1022

Query: 1394 ASC--------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
             S         Q  F       YER E LGD +LK   +  ++   P  +E +    R  
Sbjct: 1023 DSDNSGEHDTEQINFQTGMGDNYERLEFLGDCFLKMATTISIYTLMPDGNECKYHVERML 1082

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAED 1499
            ++ N  L+ +A+ + LQ ++++  F    W                              
Sbjct: 1083 LICNQNLFNHAVDRKLQEFVRSKAFDRRTW------------------------------ 1112

Query: 1500 KLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLM 1559
                      Y D  ++ G+    S  +  L+ KT+ADV EALIG  Y+       +  +
Sbjct: 1113 ----------YPDLPLKKGKAPKTSMKHN-LADKTIADVCEALIGAAYLTSKASNMDLAV 1161

Query: 1560 KWIGIQVESDPEEVGCPS---RPACVPE------SVLRSVDFHALEDALKIKFKDRGLLV 1610
            K +    +S    +       +   VPE      S  +      +  A   +FK   L+ 
Sbjct: 1162 KAVTRMTKSKNHRMKAFKDYYKAYKVPEWQEGNASASQRSLVQKVAQATGYRFKSAQLVQ 1221

Query: 1611 EAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
             A  H S P   V  YQRLEF+GD++LD  I  +L+ ++    P  LT+ + A V+N+  
Sbjct: 1222 SAFKHPSWPYESVPDYQRLEFLGDSLLDMAIVDYLYQNFPRADPQWLTEHKMAMVSNQFL 1281

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEV----------LEELLKPGFNSFGLGDCKA 1720
              + VK  LH HL   +S+L  QIRD+V E+           +E+  P    F L    A
Sbjct: 1282 ECLCVKLGLHQHLLSSTSSLLSQIRDYVVELEVAEENAHKEAKEVGTPMRKDFWLKVGSA 1341

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLP-MHPVRELQERC 1775
            PKV  D++E++ GA+F+DS    SVV   F    QP    M   +T    HPV  L ++ 
Sbjct: 1342 PKVYADVIEALVGAMFVDSKYKFSVVENFFTKFIQPYFQDMRLYDTFANKHPVTFLSKKM 1401

Query: 1776 QQQ 1778
             Q+
Sbjct: 1402 HQE 1404


>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
 gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
          Length = 1722

 Score =  215 bits (548), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 191/714 (26%), Positives = 331/714 (46%), Gaps = 85/714 (11%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           +AR YQL ++E   ++N I +L TG+GKT +A+L ++   +++ R  ++    A+F+   
Sbjct: 7   EARGYQLRLVEYITRRNGIIYLPTGSGKTYVAILALKRFSHNMDRSIEEGGQRALFICNT 66

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +++ + + VG Y GE G D W+  +W  E    QVLV TAQ++L++    
Sbjct: 67  VELARQQAVYVKKFSNFKVGFYVGEQGTDNWNRSKWSDEIRDNQVLVGTAQVILDLFLQK 126

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            ++++++++ I+DECHH    HPY   M  F   +     P V G+T   V +KG   + 
Sbjct: 127 HMELKSVSIAIIDECHHGTGSHPYHEFMRLFQMQSETSSLPRVVGLTG--VLIKGNEIK- 183

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHEQLKQME 537
               K+  LE+     + T+ D KE+E    H   P E ++ Y      + + + ++   
Sbjct: 184 QLGKKLKELETTFRGNIVTVSDMKEMENVILHSTKPRECLITYKSVVQRFEVIDNIR--- 240

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD--GAANLIQKLRAINYA 595
                     +  S ++ +   D G  + +R   G+  + E +   A  L+     +N  
Sbjct: 241 ---------CNIESFYRTLDLVDIG-HQPVRMSRGMRFQREPNKKNAIKLV-----LNDF 285

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
           L +L  +  Y  + + ++ L   E    Q +     +    V++L  CE +  A+  K  
Sbjct: 286 LFQLESYGVYAGSIAIVSVLVEFEIKRRQAETLSMRNMYRAVITL--CESIRHALVAKLR 343

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            ++D E         E+ + EL    V+                   TPKVQS +  L K
Sbjct: 344 DMLDDE---------EMPDDELNSEEVIMNFS---------------TPKVQSFLHYLKK 379

Query: 716 Y---QHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNN------S 761
               +  +D   ++FVER      +  L+L  + A     + +    ++G N+      S
Sbjct: 380 AFANKEPKDICCLVFVERRYTCKCIYGLLLNFIAATPELRNSLFPQFMVGRNSIFLDFES 439

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
              R +Q +  I +FRDG   +++ +SV EEG+D++ CN VI  D  KT   Y+Q++GRA
Sbjct: 440 ILERRWQ-KSAIQQFRDGEANMMICSSVLEEGIDVQACNYVIILDPIKTFNMYVQTKGRA 498

Query: 822 RKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTDLSHLKDTSRLISVD 876
           R   S +IL    +E+  +S         ++E  E L+   +ERTD   + + +     +
Sbjct: 499 RSKDSSFILFSSELEQQKISEQIHQYRKAHAEIGEYLKDRVLERTD-PQMDEMNEHFQDE 557

Query: 877 AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYS 935
             P     V   GAV+  +SA+ L+H YC Q+PSD + I+ P F ++E  E     +++ 
Sbjct: 558 IQPF----VNKNGAVLLASSALALLHRYCQQMPSDAFGIVLPWFKLLEPEEVKKFTSDWQ 613

Query: 936 CK----LQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            K    + LP N+   E +       +R A+ +    AC KLH +G   +  LP
Sbjct: 614 RKHIVSITLPLNSTLREAIYSDPMPCVRWAKISAAFKACIKLHALGELNERFLP 667



 Score =  157 bits (396), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 251/566 (44%), Gaps = 109/566 (19%)

Query: 1304 VSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIM- 1362
            +SY  N  S +  + ++ E E +E+  +T +      +        S  +   +LP+++ 
Sbjct: 1110 LSYFYNFTSGQLLNLDKLEHEDKELWTQTQFKMREGNI-------YSCQKSDHKLPALLP 1162

Query: 1363 ------RRVESMLLAIQLKDKIN---YPVPASKILEALTAASCQETFCYERAELLGDAYL 1413
                  RRVE + L++  +   N    P    + L A+T A   + F  ER ELLGD +L
Sbjct: 1163 ASGDNGRRVEQVQLSVLQRSISNEHITPAEQGEFLAAITYAGSVDVFDMERFELLGDCFL 1222

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG-LQSYIQADRFAPS-RWAA 1471
            K   + +L  KYP  +EG LT+++  +VSN  L  Y LS+  + + I +  F P   W  
Sbjct: 1223 KLSATLYLANKYPDWNEGILTQVKSTLVSNRNLL-YCLSETDIPTRICSTLFTPKYTWLP 1281

Query: 1472 P------GVLPVFDEDTK--------DGDSSLFDQEKSVAEDKLGTDK--------NYNE 1509
            P       VL ++ E  +        +  +    +E+     K G             N+
Sbjct: 1282 PSLGLPQNVLALWKEKPELAALVGPHNIRNLCISEEEVFGNGKCGEHVYRSFVDGCQANQ 1341

Query: 1510 YEDDDMEDGELEGDSSSYRV-LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
            Y      D   E +     V +  K +AD +EAL+GV     G      ++++ GI  +S
Sbjct: 1342 YTHHAGMDFSSEINFCVGLVQMPDKLIADTLEALLGVVVKNYGLQHGFRMLEYFGI-CKS 1400

Query: 1569 DPEEVGCPSRPAC---VPESVLRS-----------VDFHALEDALKIKFKDRGLLVEAIT 1614
            D   +G P        +  + +R+           ++   LE  L   F+DR  L++A+T
Sbjct: 1401 D---IGKPLTQLLDLQLGSARMRTNISQREVDGFLINHQHLEQNLGYTFRDRAYLLQALT 1457

Query: 1615 HASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            H S P++ ++ CYQ LEF+GDA+LD LI+ ++F   T + PG+LTDLR+A VNN   A +
Sbjct: 1458 HPSNPTNRLTGCYQELEFIGDAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACI 1517

Query: 1674 AVKHKLHVHLRHGSSALDRQIRDFVK--------------------EVLEELL------- 1706
             V+H+ H  +   ++ L   I+ FV+                    +V  E L       
Sbjct: 1518 CVRHRFHFFILAENALLTESIQSFVQFQESQNHRVTNHVRILMEESDVQPEPLDSDDELE 1577

Query: 1707 ----------------KPGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
                             P    F +  +   PK LGD++E++  A++LD  RD +  WQV
Sbjct: 1578 LAEAAQQQKLAINGADAPHVGEFNISHNVDVPKALGDVLEALIAAVYLDC-RDLTTTWQV 1636

Query: 1750 FQPLLDP--MVTPETLPMHPVRELQE 1773
               L +P  +     +P++P+R+L E
Sbjct: 1637 VYRLFEPELLEFSRNVPLNPIRQLFE 1662



 Score = 48.9 bits (115), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG++VT   A +  KR  V  +  ++T  S    K+      +  SY  +   KY   
Sbjct: 878  DYEGKVVTQWYANYDDKRMLVTKVHTDLTPMSMMEEKQ------QDKSYYQFTMAKYSNY 931

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K+  LI  R ++   N    +   S  Q     +++       L PELCF    
Sbjct: 932  IGDVVHKQHFLIEVRELTDQLNFYVKQRTKSSAQSKARAKVM-------LIPELCFNFAF 984

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  ML A  L+ +IN
Sbjct: 985  PGDLWVKLIFLPSILRRIYYMLHAETLRVRIN 1016


>gi|256087296|ref|XP_002579808.1| dicer-1 [Schistosoma mansoni]
          Length = 2174

 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 258/544 (47%), Gaps = 90/544 (16%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P + IL+ALT +   +    ER E +GD++LK+VV+  L+L YP+ HEG+L+ +R ++
Sbjct: 1632 PGPTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRI 1690

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDGDSSLFDQEKSV--- 1496
            V N  LY+   +K LQ+ +   +F P   W  PG     D+   +     F+  +++   
Sbjct: 1691 VCNSNLYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIW 1750

Query: 1497 AEDKLGTD---KNYNEYEDDDMEDGEL----------------------EGDSSSYRV-- 1529
            + D L  D   +N +  +++ ++  E+                         ++ Y +  
Sbjct: 1751 STDTLMDDEVLRNIDFIDENKIKPIEIFQFLNGIQMIQKCYMHNICKLFTSLNNQYLITI 1810

Query: 1530 ---LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR-PACVPES 1585
               +  K++AD VEALIG Y    G+ +A  LM+W GI      +     +R P  +P+S
Sbjct: 1811 QQAIPDKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKS 1870

Query: 1586 VLRSVD--------------FHALEDALKIKFKDRGLLVEAITHASRP------------ 1619
                 D              F  LE +L   FKD  LL++A TH S              
Sbjct: 1871 NYLDTDENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLS 1930

Query: 1620 -------SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFAR 1672
                   S+ + CYQRLEF+GDAVLD++IT+ L+       PG LTDLR+A VNN  FA 
Sbjct: 1931 DQSNLMFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAA 1990

Query: 1673 VAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG------DCKAPKVLGD 1726
            +AV+  LH + R  S  L   I  FV++          N+  L       D + PK L D
Sbjct: 1991 LAVRIGLHKYFRASSPQLLHTIDVFVRKSNNANNTIPTNTGHLTTNRLSDDVEIPKALSD 2050

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQERCQQQAEGLEY 1784
            I ES+AGAIFLDS      VWQ+F P++   +   T  +P  PVR+L E    + EG ++
Sbjct: 2051 IFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLEL---EPEGTKF 2107

Query: 1785 KASR---SGNLAT-VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE----KETAEAK 1836
            + +R    G ++    V   G   GV +N   ++A+ LAA+ AL VL+      +T    
Sbjct: 2108 ERARRMVDGRISVCAHVLGKGRFYGVGRN--YRLAKSLAAKRALRVLRRLNQPSQTTPVT 2165

Query: 1837 EKGD 1840
              GD
Sbjct: 2166 TNGD 2169



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 70/277 (25%)

Query: 770 QETIAKFRDGRVTLLVAT-----SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR-- 822
           +ETI  FR G + LLVAT     +V   G ++ +CN+VI   L  ++  Y+ S+ R+R  
Sbjct: 629 EETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRLV 688

Query: 823 KPGSDYILMIERGNL-----------SHATFLRNARN-SEETLRKEAIERTDLSHLKD-- 868
             G+  I +++  ++           +  + L + +N S++T     ++    +H+ D  
Sbjct: 689 NYGAKVIYLMDHDSIEKINNNNNNNVNKQSNLNDKQNRSKQTDDHSTVDSMYSNHINDQF 748

Query: 869 -----------TSRL--------------ISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
                        R                 VD +   ++     G    L+ A+ +I+ 
Sbjct: 749 LGNFQQLEQLLLQRCRGYNVFADEHAIDPTVVDKILPPIFPRGPCGPKFCLSKAINIINQ 808

Query: 904 YCSQLPSDRYSILRPEFIMERHEKPGGPTE-----------------------YSCKLQL 940
           YC++LPSD  + L P++  +   +P G T                        Y C L+L
Sbjct: 809 YCARLPSDYITNLTPKWYWKIFPQPQGFTPSSTGPGSTCGSLKDLQPDGTFNLYQCVLRL 868

Query: 941 PCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
           P N+   E + G      +LA+ +    A   L+  G
Sbjct: 869 PINSSVKETIVGEPMVCKKLAKYSAAFNAIHLLYLSG 905



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 37/146 (25%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            +YV  IR +M+  S FP  +       + ++A YY  KY   +    QPL+         
Sbjct: 1276 YYVAIIRNDMSPLSPFPSDK-------FRNFAAYYINKYNALITTNNQPLLDVDLTVLRL 1328

Query: 1309 NLLSPRF------------------------------EHSEEQEGEGEEILDKTYYVFLP 1338
            NLL PR+                              ++ ++Q  +  +  D T    L 
Sbjct: 1329 NLLIPRYMNIYGHNNTNANDNNGDINNSKSNNVYTHKQYYQQQNHDDHQGEDLTNKQLLV 1388

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRR 1364
            PELCF H  P S+ R A  +PSI+ R
Sbjct: 1389 PELCFRHSFPASVWRKAVCIPSILYR 1414


>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Stereum hirsutum FP-91666 SS1]
          Length = 1537

 Score =  215 bits (547), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 207/745 (27%), Positives = 332/745 (44%), Gaps = 110/745 (14%)

Query: 294 EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKML 353
           E   +M   + R YQ ++L+++   N +  L+TGAGKT IAVL +R   ++++++  K +
Sbjct: 3   EPSPEMKLPKTRGYQQEMLDESLNNNIVIALDTGAGKTHIAVLRMR---HEVEKETTK-V 58

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQI 412
             FL P V L YQQ  VI+      V    G +  D W D   W R   T +++V T  +
Sbjct: 59  CWFLTPTVALCYQQRSVIQSHLHVPVAMISGALEPDQWKDPNLWSRTLATHRIVVSTHDV 118

Query: 413 LLNILRHSIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHTTSK------EKRPSVFG 465
           LLN LRH  I +   I+L++ DE HHA  KHPY+ +M EFY    K        RP V G
Sbjct: 119 LLNALRHGYIHLGRHISLVVFDEAHHAADKHPYNRIMQEFYFELPKVDRGDGNVRPRVLG 178

Query: 466 MTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK----DRKELEKHVPMPSEVVVEYD 521
           +TASPV   G     D       LE+ LD   CTI+    +R EL  HV  P    V Y+
Sbjct: 179 LTASPV-FGG-----DIERAFLKLEANLD---CTIRAPVANRSELATHVHRPEFKHVIYE 229

Query: 522 KAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMG-----ARDAGAKEELRQVYGVSE- 575
           +   +    E      V+++   +S   R     +G     AR     +  R    +S+ 
Sbjct: 230 EPEYMMGYGEAPSASVVSLQSVVESLDIRQDPYVLGLQAELARLPPGPDRSRTDQRLSKT 289

Query: 576 --RTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 633
             R +S     +    RA +    +LG W A    Q+ L      E+A            
Sbjct: 290 INRQDSYTHKGMRDFFRAADEICSDLGAWAADWYVQTVL------EQA------------ 331

Query: 634 LSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVII 693
                     + ++G V +    + + E  ++ G  + ++      + V    E +    
Sbjct: 332 ---------WDTMKGPVPEFAGALNNREKQYLMGALSRVQA-----TPVSYDPEEI---- 373

Query: 694 GAAVADGKVTPKVQSLIKILLKYQ-----HTEDFRAIIFVERVVAALVLPKVFAELPSLS 748
                  + + KV+ LI+ LL  +     + E++  +IFV R  A + L ++    P   
Sbjct: 374 -----VRRSSDKVKKLIETLLHEKEVFESYDEEYHGLIFVTRRDAVIALSEILENHPETK 428

Query: 749 FV-KSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIR 797
            V ++ +L+G + +   + F            ++T+  F+ G + L+VAT+VAEEGLD++
Sbjct: 429 DVFRTGALLGMSENSARKAFLDITRNMLKQSNEDTLRDFKVGDLNLIVATAVAEEGLDVQ 488

Query: 798 QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE-ETLRKE 856
            CN V+R+D    ++++ QSRGRAR+  S ++LM    ++ HA  ++     E E +R  
Sbjct: 489 ACNNVVRWDPPMNMVSWAQSRGRARRQRSSFVLMFSTASV-HAKDVQGWEYLEQEMVRMY 547

Query: 857 AIERT--DLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLP----- 909
            +ER   +     +       +     +Y  E TGA ++L+SA+  ++ +C+ LP     
Sbjct: 548 NMERQRREEDEAGEEDEEDGNEEYVKPLYN-EKTGAKITLDSAITHLNHFCAILPGGGGL 606

Query: 910 ---SDRYSILRPEFIMERHEKP------GGPTEYSCKLQLPCNAPFEKLEGPVCSSMR-L 959
              S  Y I  PEF  E H +P       GP   +  L    +  F     PV    +  
Sbjct: 607 GSHSPIYDINPPEFPSEWHAQPIALLPYAGPFGATVTLPKLLDRRFRVFSTPVIHGRKSY 666

Query: 960 AQQAVCLAACKKLHEMGAFTDMLLP 984
           A++ V   A K LH+ G   D LLP
Sbjct: 667 ARRRVAFEAYKALHDAGLLNDHLLP 691



 Score =  152 bits (383), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 222/542 (40%), Gaps = 76/542 (14%)

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            PLI  + +    N L+P  E S+      +        + L PE   +        + A 
Sbjct: 925  PLIVAKALPSRVNFLAPLPEDSKGAAAASQR------SILLLPEFSTVALTSFVETQYAL 978

Query: 1357 RLPSIMRRVESMLLAIQLKDKINY------PVPASKILEALTAASCQETFCYERAELLGD 1410
             +PSI+R +   +    ++D +         +P   +  A+T+   Q    Y+R E LGD
Sbjct: 979  WMPSILRYLSITMTVCAMRDDLLLGSPRLSAIPLKLLTTAVTSGVAQMGMNYQRLETLGD 1038

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWA 1470
              LK+V S  L  +YP  HEG L R +   VSN  L + A  K L  YI  D FAP +W 
Sbjct: 1039 TVLKFVTSLNLLSEYPFWHEGYLARRKDHAVSNAQLAKAAYEKKLFKYIIRDMFAPRKW- 1097

Query: 1471 APGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVL 1530
                       T  G + +     + AED         +       + + +  + +   +
Sbjct: 1098 ---------RPTYIGGAKVEPPSDAKAEDPEDMAPTVVKRPQKGPSEAKKKQRAKAQGEI 1148

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPAC--VPESVLR 1588
            S+K LADVVEALIG  Y+ G  D A   +K  G+ +  +   +     P    V E    
Sbjct: 1149 STKVLADVVEALIGAAYIHGSFDLAVECIKVFGLGLSCEWLPIAARIEPMLSRVIELEFF 1208

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSS-GVSCYQRLEFVGDAVLDHLITKHLFF 1647
                 A+E+ L   F+ + LLVEA+THAS  +  G   Y+R+EF+GDAVLD L+T +L+ 
Sbjct: 1209 PTQLSAVENILGYTFERKALLVEALTHASYQTDLGTISYERMEFLGDAVLDMLVTDYLYH 1268

Query: 1648 SY-TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH------------------------ 1682
            +   +  P  L   + A VN      + ++    +                         
Sbjct: 1269 APGKDYKPAELHLRKTAVVNGHFLGFICLRASTFISTEMPTKVNNPNSRRRGNAFLIQLE 1328

Query: 1683 ------------LRHGSSALDRQIRDFVK-------EVLEELL--KPGFNSFGLGDCKAP 1721
                        L   S  L+ Q   F +       E +E  L   P F    L   +AP
Sbjct: 1329 QQQERLYLSKCLLHSNSKVLELQSNAFARFEKTDGGEHIERSLLEDPIFPWAALTWLEAP 1388

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL-----LDPMVTPETLPMHPVRELQERCQ 1776
            K L D+VES+ GAIFLDS  +  VV  V + L     L+ +V  +    HPV  L E   
Sbjct: 1389 KFLSDMVESLIGAIFLDSKGNWDVVRDVLRLLGIWEVLERIVRDDVEVKHPVSRLAEWAA 1448

Query: 1777 QQ 1778
            +Q
Sbjct: 1449 KQ 1450


>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
          Length = 2057

 Score =  215 bits (547), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 169/542 (31%), Positives = 260/542 (47%), Gaps = 97/542 (17%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1512 PSP-SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLRSRQ 1570

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDG------------DS 1487
            VSNL LY+    K L   + A +F P   W  P       +D +              D+
Sbjct: 1571 VSNLNLYRLGRRKMLGERMIATKFEPHDNWLPPCY--YVPKDLEKALIEAKIPACYWEDA 1628

Query: 1488 SLFD-QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS-------------------- 1526
             L D +E +V E      K   +YE D+ +  E   D+ +                    
Sbjct: 1629 RLLDVKELTVDEICEMLKKRIYDYEQDEKDALEYGNDAKNESTEYEEIINGPVINRDEFP 1688

Query: 1527 ----YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------ES 1568
                Y +++      K++AD VEALIG   +EGG   A   M W+GI+V         E+
Sbjct: 1689 CFIPYNLVTQHSIPDKSIADCVEALIGANLIEGGPRGALLFMAWLGIRVLPSKEIPFNEN 1748

Query: 1569 DPEEVGCPSRPA--------------CVPESVLRSVD-------------FHALEDALKI 1601
              E +   ++P                 P+S L                 +   E+ +  
Sbjct: 1749 SLENIPGSTKPFERDGKKYQIVYGYWASPKSPLLHFSANPYETLERFLNGYSVFEEHIGY 1808

Query: 1602 KFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
             F DR  L++A+THAS   + ++ CYQRLEF+GDAVLD+LIT+HL+       PG LTDL
Sbjct: 1809 HFNDRSYLLQAMTHASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDL 1868

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNSFGLGDC 1718
            R+A VNN  FA +AV+H  H + RH S +L+  I  FV+  +E    +   F      +C
Sbjct: 1869 RSALVNNTIFASLAVRHGFHKYFRHLSPSLNDVIDRFVRIQVENNHSISEEFYLISEEEC 1928

Query: 1719 ------KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRE 1770
                  + PK LGDI ES+AGAIFLDS     +VW++F  ++ P +    +++P  P+RE
Sbjct: 1929 DEAEDVEVPKALGDIFESVAGAIFLDSNMSLDMVWKIFSNMMKPEIDQFSDSVPKSPIRE 1988

Query: 1771 LQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            L E   + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK
Sbjct: 1989 LLELEPETAKFGKPEKLADGRRVRVTVDVFGKGTYRGIGRN--YRIAKCTAAKCALRQLK 2046

Query: 1829 EK 1830
            ++
Sbjct: 2047 KQ 2048



 Score = 67.8 bits (164), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++ ESSFP +        Y+++ +YY +KY + +   +QPL+     S   
Sbjct: 935  FYVAEICDYLSPESSFPGES-------YATFKEYYFRKYNITIQNCQQPLLDVDHTSARL 987

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC IH  P SL R A  LP
Sbjct: 988  NFLTPRYVNRKGVALPTSSEETKKAKRENLEQKQ--ILVPELCTIHSFPASLWRIAVCLP 1045

Query: 1360 SIMRRVESMLLAIQLK 1375
             +  R+ ++LLA +++
Sbjct: 1046 CVFYRINALLLADEIR 1061



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 25/197 (12%)

Query: 842  FLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLI 901
             L    N E TL +E IE    ++L    R I  D +             VSL +A+ L+
Sbjct: 623  LLEKCSNQEPTL-QELIEADLYTNLIKPYRPIRSDDL---------NTPCVSLTNAILLV 672

Query: 902  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LEGPVCSSMRLA 960
            + YC++LPSD ++ L P +   +  K G  T Y   ++LP N+P ++ + G    S  LA
Sbjct: 673  NKYCAKLPSDTFTKLTPIWRCIK-TKRGDRTYYQYTVRLPINSPVKQDIYGIPMPSRVLA 731

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPDKGSG-------------EQQEKVDQNDEGEPLPGT 1007
            ++   L  CK LH  G   D L P    G             E+++    N+  +P PGT
Sbjct: 732  RRFAGLICCKVLHLSGELDDNLQPIGKEGFRASEPDWNNFELEKEDADIVNENLDPRPGT 791

Query: 1008 ARHREFYPEGVADILQG 1024
             R R++Y + +A +   
Sbjct: 792  TRRRQYYYKRIASVFSN 808



 Score = 62.4 bits (150), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 45/65 (69%)

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           + +E + +FR     LL+ TSV EEG+++ +CN+V+R++L  T  +Y+Q +GRAR   + 
Sbjct: 475 KQEEVLKRFRMHSCNLLIGTSVLEEGIELPKCNLVVRWNLPTTYRSYVQCKGRARAQKAH 534

Query: 828 YILMI 832
           +I+M+
Sbjct: 535 HIIMV 539


>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
 gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
          Length = 1672

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 253/951 (26%), Positives = 402/951 (42%), Gaps = 159/951 (16%)

Query: 293  SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK- 351
            S+ KE M +   R YQ+ + E    KNTI FL TG+GKT IA+++++ I + L+    + 
Sbjct: 1    SQNKEPMEDFAPRNYQVQMKEICLAKNTIIFLPTGSGKTYIALMVMKEISHQLRNTVHEG 60

Query: 352  -MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTA 410
                 FL   V L  QQA+       + V  Y  E+  D W + RW  EF   QV++ TA
Sbjct: 61   GKRTFFLANTVALAKQQAQFFARHMPFNVRLYTSEVNVDAWKSDRWHEEFSEGQVIICTA 120

Query: 411  QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            QILL++LRH  +    INL++ DECH AV +HP   +M E     + E RP V G++ + 
Sbjct: 121  QILLDVLRHGYMSPANINLIVFDECHRAVGQHPMHAIMKEIVAAPASE-RPRVLGLSGTL 179

Query: 471  V--NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
            +   LK  S   D   ++ N  S   + V    D   +      P+EV+V Y K A    
Sbjct: 180  LFKELKMASQVPDELERLENTFSSTIATVANYDDYATVASFSTNPNEVLVTYSKPAV--H 237

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            L   +K+M                W     R     E L QVY                 
Sbjct: 238  LMPLVKEM----------------W----PRIDAFVEWLLQVY----------------- 260

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                   L E        + +SF   L+  +RA  +   + +E  +      +   +V+ 
Sbjct: 261  -------LPEYSTQSTRTLQKSFCKPLKEVKRALTEFKHQLEEHGMYAGSLAILAVIVQL 313

Query: 649  AVSKKDA------KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKV 702
             VSK+ +      +V  S   F E   +E+ E        +SG      I+  +      
Sbjct: 314  EVSKRQSPCDKARQVYRSAISFCESIRHELVEA-------MSGLRGTHQILSFS------ 360

Query: 703  TPKVQSLIKILL-KYQHTED--FRAIIFVERVVAALVLPKVFAELPSLSF---------- 749
            + + + L+K L   Y+  ED   +A++FV+R   A    KV   L  + F          
Sbjct: 361  SDQARKLLKYLEDSYRTAEDKNKQALVFVKRRFTA----KVLYHLIRIYFHCLSKRDNED 416

Query: 750  ------VKSASLIGHNNSQE------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIR 797
                  VK   ++G N + E      +   + +  I  FR  ++ +L AT+V EEG+D++
Sbjct: 417  ELVEPIVKPDFIVGANAALEESIDAILVVREDRRVIENFRKRKINVLCATNVLEEGIDLQ 476

Query: 798  QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSH-ATFLRNARNSEETLRKE 856
             CN+VI +D   +  +++QS+GRAR   S Y++M    +L   A  ++  R+ E  L++E
Sbjct: 477  MCNMVIMYDAPLSYASFMQSKGRARMKTSTYLMMTPAADLQQFAKRMKLYRDIENRLKEE 536

Query: 857  AIERT--DLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
             + +T      L++  R   +D +    Y      A +   SA+ L++ YC  +P D ++
Sbjct: 537  LVGKTINRPEPLENDVRKELLDDLIPPFYT--PFKAKLDALSAIQLLNRYCMSMPRDLFT 594

Query: 915  ILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLH 973
                    ER ++   PTE    ++LP  +   E + G    +++LA+Q+    ACK+L 
Sbjct: 595  --GSNVTWERIDR--SPTEIIVTVKLPLQSTVREVIHGQTMKNLKLAKQSAAFNACKRLF 650

Query: 974  EMGAFTDMLLP----DKGS--GEQQEKVDQNDEGEPLP---GTAR----HREFYPE---G 1017
            E+G     LLP    DK     EQ  K+ +    EP P   GT +    H+  YPE   G
Sbjct: 651  EVGELNMYLLPIATKDKVEELSEQYFKLWRKMSDEPNPKQAGTMKYVRGHKIVYPEETVG 710

Query: 1018 VADILQGE----WILSGR---DGCTGSKLFHLFMYTVKCVNN-GI---SKDPFLTQVSDF 1066
                  GE    +I+  R   D  T  +   +F       NN GI    + P L ++  F
Sbjct: 711  CTPQADGEQCYVYIVRMRAHFDANTHLENVRIFQELYSSANNFGILTRKRLPRLARMKLF 770

Query: 1067 AVLFSSELD--------------AELASLKNFHVRLMSIVLDVDVEPYTT--PWDPAKAY 1110
              L +  ++               EL  LK FH+ L   +L V  +P+T          +
Sbjct: 771  VTLGAIGVEIVPEPVCITLAPDSGELQRLKRFHLLLFRDLLKV-WKPFTVLDALPEENGF 829

Query: 1111 LFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTL 1161
            L VP++  +S+      DW+L+ K            RAR  +   T +  L
Sbjct: 830  LIVPMLRSQSI------DWELMGKFPYLRPAAETSTRARQHLRFETEQYLL 874



 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 140/447 (31%), Positives = 219/447 (48%), Gaps = 53/447 (11%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            +L + + +  N  +  S +L+ALT  S  + F  ER E+LGDA+LK+ VS ++  ++   
Sbjct: 1181 MLRLTMDNTANVALQQSDLLQALTTKSSADVFNLERFEVLGDAFLKFAVSVYILFRHTSW 1240

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WA-----APGVLPVFDEDT 1482
            HEG LT  + +MVSN  L   A+  GL   I+A  F P   W       PG +     D 
Sbjct: 1241 HEGYLTTCKGRMVSNRNLLYCAMGYGLPGKIKAHPFDPKNDWVPPLSTVPGAVRRAMVDA 1300

Query: 1483 KDGDSSLFDQEKSVAEDKLGT--DKNYNEYEDDDMEDGELEGDSSSYRVLSS-----KTL 1535
             +  + L++ + +  E + G       +++    +E       S+ + VL       K +
Sbjct: 1301 NESPALLYNLKLTEEEIQSGVVAQATVDKFLPL-IEQAPAPSQSTLHTVLQQVQIRDKVV 1359

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGI-----------QVESDPEEVGCPSRPA---- 1580
            ADV EAL+GV     G + +   +  +GI           +  + P     P R      
Sbjct: 1360 ADVTEALLGVCVKTVGYERSFRFLSHLGIIPKGADVPMLLRTTTFPIGDYFPVRHKVDQL 1419

Query: 1581 -CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
             C PE +         E  L  +F++R  L++A TH S  S+ ++  YQ+LEF+GDAVLD
Sbjct: 1420 LCNPERI---------EATLGYRFRNRTYLLQAFTHTSYTSNSLTGSYQQLEFLGDAVLD 1470

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
             L++ +++    ++ PG+LTDLR+A VNN N A V V+++LH H+   S  L   I  FV
Sbjct: 1471 FLVSMYIYERNPSMSPGQLTDLRSALVNNVNLACVLVRNELHRHILSQSPMLTDAIGKFV 1530

Query: 1699 K---------EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
                           LL    ++        PKVLGD++E++ GAI+LDSG D +  W+V
Sbjct: 1531 AVHRCHRNQGSNWVRLLTEESDTPMAEYVDVPKVLGDVLEALIGAIYLDSGNDLAATWEV 1590

Query: 1750 -FQPLLDPMV--TPETLPMHPVRELQE 1773
             F+ L D +   T +T P+  VR+L E
Sbjct: 1591 CFRLLRDEIADFTRKT-PIQVVRQLYE 1616


>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
 gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
          Length = 2280

 Score =  214 bits (546), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 183/568 (32%), Positives = 268/568 (47%), Gaps = 98/568 (17%)

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPA-SKILEALTAASCQETFCYERAEL 1407
             S V+ A  LP I+    S  L  +L   + +P P+ S IL+ALT ++  +    ER E 
Sbjct: 1718 ASPVKAA--LPMILPAGFSFDLQPEL---VGHPGPSPSVILQALTMSNANDGINLERLET 1772

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP- 1466
            +GD++LK+ ++ +L++ Y   HEG+L+ +R + V+NL LY+    K L  Y+ A +F P 
Sbjct: 1773 IGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPH 1832

Query: 1467 SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT---DKNYNEYEDDDM--EDGELE 1521
              W     LP      K+ + +L + +      KL      KN +  +  +M  E  E  
Sbjct: 1833 DNW-----LPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKAEAL 1887

Query: 1522 GDSSS----------------------------YRVLSS-----KTLADVVEALIGVYYV 1548
            G   S                            Y ++S      K++AD VEALIG Y +
Sbjct: 1888 GLPGSAEQATPQATTVPLDESNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLI 1947

Query: 1549 EGGKDAANHLMKWIGIQV---------ESDPEEVGCPSRPAC-----------VPESVL- 1587
            E G   A   M W+G++V          SD E     + P              P S L 
Sbjct: 1948 ECGPRGALLFMAWLGVRVLPYSRQPAPASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLL 2007

Query: 1588 -------RSVD-----FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGD 1634
                   R ++     F   E +L  +F+DR  L++A+THAS  P+    CYQRLEF+GD
Sbjct: 2008 HYAPNAERELEHLLSGFEEFEASLGYRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGD 2067

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            AVLD+LIT+HL+       PG LTDLR+A VNN  FA +AV+H  H   RH S  L+  I
Sbjct: 2068 AVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVI 2127

Query: 1695 RDFVKEVLEE--------LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
              FV+   E          L          D + PK LGD+ ESIAGAIFLDS     VV
Sbjct: 2128 DRFVRIQQENGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVV 2187

Query: 1747 WQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGV 1802
            W V+  ++ P +     ++P  P+REL E   + A+  + +    G     TV+V+  G 
Sbjct: 2188 WHVYSNMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGT 2247

Query: 1803 QVGVAQNPQKKMAQKLAARNALAVLKEK 1830
              G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2248 FRGIGRN--YRIAKCTAAKCALRQLKKQ 2273



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L++A+ L++ YC++LPSD ++ L   +   + E+  G T Y   L+LP N+P +
Sbjct: 831  TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSER-SGVTLYQYTLRLPINSPLK 889

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G   ++  LA++   L AC +LH++G   D L P    G               E 
Sbjct: 890  HDIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPED 949

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 950  EQIVQLSD--EPRPGTTKRRQYYYKRIA 975



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1167 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYFVKYGLTIQNAAQPLLDVDHTSARL 1219

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1220 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1277

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1278 CILYRINGLLLADDIRKQVS 1297



 Score = 60.8 bits (146), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+      L F++        A         E+   + +E 
Sbjct: 507 ALIYCNQNHTARVLFELLAEMGKRDADLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 566

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 567 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 626


>gi|353236820|emb|CCA68807.1| hypothetical protein PIIN_02669 [Piriformospora indica DSM 11827]
          Length = 1466

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 184/596 (30%), Positives = 279/596 (46%), Gaps = 54/596 (9%)

Query: 1275 EYSSYADYYKQKY-GVE-LIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKT 1332
            ++S+  +Y K K  G E L+   QPLI    +    N LSP    S    G         
Sbjct: 835  KFSNLVEYCKAKRKGFEGLVDYDQPLIEVSNLPSVVNRLSPTISSSNTAPG-------AP 887

Query: 1333 YYV--FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDK-INYPVPASKILE 1389
             Y   F+ PELC    +P S +R    LPSIM+RVE  LL  +L     N  +  S +  
Sbjct: 888  LYTAKFVIPELCSKFTIPASTMRTLSLLPSIMKRVEDTLLVRELNAMYFNNEIDESALQA 947

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            A+TA S      YER ELLGDAYLK++ S +LF+  P KHEG L   RQ+++SN  L   
Sbjct: 948  AITAPSASMEVDYERLELLGDAYLKYLSSIYLFVTNPNKHEGILHLARQKIISNRALLVN 1007

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD-------GDSSLFDQEKSVAEDKLG 1502
            A   GL  YIQ+  F P  W   G   V  E           G++++  +E+  + D  G
Sbjct: 1008 ADKSGLPQYIQSKPFLPKMWLPRGYTVVRPEPKSTATHKESRGNTNMEIKEERSSPDPNG 1067

Query: 1503 TDKNYNEYEDDDMEDGE--LEGDSSSY----RVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
               + NE +   ++  E  L+   S Y    + L  K +ADV EA+IG  +  GG     
Sbjct: 1068 LPTSANEDKSLTIKADEQKLKSKKSLYDEDHQWLGDKCVADVAEAIIGAAFQTGGPSLGL 1127

Query: 1557 HLMKWIGIQVE--------SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGL 1608
             ++K + + +         S   +   P     + ++VL +V     E  +  KF    +
Sbjct: 1128 KVVKSLHLPLPFIESWDDFSLKAKAPPPDLTITLEDNVLETV-----EATVGAKFHRPHI 1182

Query: 1609 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            L +A+TH S   + ++CY+RLEF+GDAVLD L+ +H+F  +  L PG LT L+ A V+N 
Sbjct: 1183 LAQALTHTSARGNDMTCYERLEFLGDAVLDFLVIQHIFDLHGRLTPGALTMLKGAMVSNS 1242

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--LLKPGFNSFG------LGDCKA 1720
              A ++V + LH  L   S  + + I ++V  V E+  L     +  G        + + 
Sbjct: 1243 ALAAISVHYGLHKFLVVESKNVKKAIDEYVPAVEEKQRLEYAAADEEGRLKGQYWLEVEP 1302

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM----VTPETLPMHPVRELQERCQ 1776
            PK + D+VESI GA+++  G   +    ++  LL P     ++ +TL  HP + L E  Q
Sbjct: 1303 PKSVADVVESILGALYVSDGFKLTGAQAMYDTLLRPFYDQHISLKTLSHHPTKILFELFQ 1362

Query: 1777 QQA----EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
             Q     E  ++     G L   EV +  V +    +  +  A + A+  AL  L+
Sbjct: 1363 SQGCQAFEITKHIDEHDGELIRCEVVVHNVILAAGVDQSQNFAARRASFEALDALE 1418



 Score =  103 bits (258), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 47/320 (14%)

Query: 693 IGAAVADGKVTPKVQSLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELP-SLSFV 750
           + AA     V+PKV  L++IL  +Q   D FR ++ V R + AL + ++       + F+
Sbjct: 267 LDAASRGFNVSPKVTKLVQILQCFQQAGDTFRGVVLVRRRITALAIVEILKTASEQIPFI 326

Query: 751 KSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
           +  +L G  + + +    + E    F++G   LL+AT +AE+GLD+  C  VIR+D++ +
Sbjct: 327 RVEALTGPWSHENLPQLSLLE---DFKNGIYNLLIATKIAEDGLDMPPCTCVIRYDISHS 383

Query: 811 VLAYIQSRGRARKPGSDYILMIER-GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT 869
            ++Y Q+R  A+      ILM+++  ++   T    AR  +E              +KD 
Sbjct: 384 SVSYAQTRAMAKGKDCHLILMLDKNSDMGRQTIRGVARMPDE--------------VKDW 429

Query: 870 SRLISVDAV----PGTV------YQVESTGAV---------------VSLNSAVGLIHFY 904
           ++ ++++      P T+      Y  +S G                 +    AV +I+ Y
Sbjct: 430 TQRVAINKSGAYPPATISQNTEGYYSDSDGEAHAQAEYIKDPTMSGRIYAEDAVSVIYRY 489

Query: 905 CSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAV 964
            + L       ++ E +     +    +E+ C +  P N     +EGP   S   A++A 
Sbjct: 490 LATLRKGSVEDVKMENVFYFTMR--ASSEHVCTVVFPPNGFIAHVEGPPSVSPGAAKRAA 547

Query: 965 CLAACKKLHEMGAFTDMLLP 984
           C  ACK+LHE+G  +  L P
Sbjct: 548 CFEACKRLHELGLLSYRLFP 567


>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
 gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
          Length = 2281

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 173/540 (32%), Positives = 250/540 (46%), Gaps = 89/540 (16%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1739 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1798

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1799 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1858

Query: 1480 EDTKD-------GDSSLFDQEKSVAED-KLGTDKNY-NEYEDDDMEDGELEGDSSSY--- 1527
                D           + +  +  AE   LG D+   N ++ DD    E   D S +   
Sbjct: 1859 WKLADLLDIKNLSSVQICELVREKAEALGLGIDQRAPNGHQLDD--SNESCNDFSCFIPY 1916

Query: 1528 -----RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--------------ES 1568
                   +  K++AD VEALIG Y +E G   A   M W+GI+V              ES
Sbjct: 1917 NLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYTKQTANTLPEIES 1976

Query: 1569 D-------------------------PEEVGCPSRPACVPESVLRSVDFHALEDALKIKF 1603
            +                         P     P  P    E       F   E  L  +F
Sbjct: 1977 NEQQRIPGSTKPDSKNTTVVYGKWPTPRSPLLPFAPNASDELEHLLSGFEEFEAILGYRF 2036

Query: 1604 KDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRA 1662
            +DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+
Sbjct: 2037 RDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRS 2096

Query: 1663 AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------LLKPGFNSFG 1714
            A VNN  FA +AV+H  H   RH S  L+  I  FV+   E          L        
Sbjct: 2097 ALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDD 2156

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK LGD+ ESIAGAIFLDS     VVW V+  ++ P +     ++P  P+REL 
Sbjct: 2157 AEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMKPEIEQFSNSVPKSPIRELL 2216

Query: 1773 ERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            E   + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2217 ELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQ 2274



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1162 FYVAEICPHLSPLSCFPGDN-------YRTFRHYYLVKYGLTIQNASQPLLDVDHTSARL 1214

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1215 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1272

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1273 CILYRINGLLLADDIRKQVS 1292



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L +A+ L++ YC++LPSD ++ L   +     E+  G T Y   ++LP N+P +
Sbjct: 826  TGASVDLGTAIALVNKYCARLPSDTFTKLTALWRCASTER-NGITLYQYTIRLPINSPLK 884

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L  C +LH++G   D L P    G               E 
Sbjct: 885  HDIVGLPMPTQTLARRLAALQTCVELHKIGELDDELQPIGKEGFRALESDWECFDLEPED 944

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            +  V   D  EP PGT + R++Y + VA
Sbjct: 945  EHIVQLTD--EPRPGTTKRRQYYYKRVA 970



 Score = 62.8 bits (151), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 47/70 (67%)

Query: 763 EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           E+   + +E + +FR     LL+ATSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR
Sbjct: 555 ELEHRRQEEVLKRFRMHDCNLLIATSVLEEGIDVPKCNLVLRWDPPTTYRSYVQCKGRAR 614

Query: 823 KPGSDYILMI 832
              + +++++
Sbjct: 615 AAPAYHVMLV 624


>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
 gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
          Length = 2278

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 180/559 (32%), Positives = 264/559 (47%), Gaps = 96/559 (17%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWV 1416
            LP I+    S  L  +L   + +P P+ S IL+ALT ++  +    ER E +GD++LK+ 
Sbjct: 1723 LPMILPAGFSFDLQPEL---VGHPGPSPSVILQALTMSNANDGINLERLETIGDSFLKYA 1779

Query: 1417 VSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVL 1475
            ++ +L++ Y   HEG+L+ +R + V+NL LY+    K L  Y+ A +F P   W     L
Sbjct: 1780 ITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNW-----L 1834

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGT---DKNYNEYEDDDM--EDGELEGDSSS---- 1526
            P      K+ + +L + +      KL      KN +  +  +M  E  E  G   S    
Sbjct: 1835 PPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKAEALGLPGSAEQA 1894

Query: 1527 ------------------------YRVLSS-----KTLADVVEALIGVYYVEGGKDAANH 1557
                                    Y ++S      K++AD VEALIG Y +E G   A  
Sbjct: 1895 TPQATTVPLDESNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALL 1954

Query: 1558 LMKWIGIQV---------ESDPEEVGCPSRPAC-----------VPESVL--------RS 1589
             M W+G++V          SD E     + P              P S L        R 
Sbjct: 1955 FMAWLGVRVLPYSRQPAPASDSERTPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERE 2014

Query: 1590 VD-----FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITK 1643
            ++     F   E +L  +F+DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+
Sbjct: 2015 LEHLLSGFEEFEASLGYRFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITR 2074

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
            HL+       PG LTDLR+A VNN  FA +AV+H  H   RH S  L+  I  FV+   E
Sbjct: 2075 HLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQE 2134

Query: 1704 E--------LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
                      L          D + PK LGD+ ESIAGAIFLDS     VVW V+  ++ 
Sbjct: 2135 NGHSISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMS 2194

Query: 1756 PMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQ 1811
            P +     ++P  P+REL E   + A+  + +    G     TV+V+  G   G+ +N  
Sbjct: 2195 PEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN-- 2252

Query: 1812 KKMAQKLAARNALAVLKEK 1830
             ++A+  AA+ AL  LK++
Sbjct: 2253 YRIAKCTAAKCALRQLKKQ 2271



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L++A+ L++ YC++LPSD ++ L   +   + E+  G T Y   L+LP N+P +
Sbjct: 829  TGASVDLSTAIALVNKYCARLPSDTFTKLTALWRCAQSER-SGVTLYQYTLRLPINSPLK 887

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G   ++  LA++   L AC +LH++G   D L P    G               E 
Sbjct: 888  HDIVGLPMTTQTLARRLAALQACVELHKIGELDDQLQPIGKEGFRALEPDWECFELEPED 947

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 948  EQIVQLSD--EPRPGTTKRRQYYYKRIA 973



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1165 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYFVKYGLTIQNAAQPLLDVDHTSARL 1217

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1218 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1275

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1276 CILYRINGLLLADDIRKQVS 1295



 Score = 60.8 bits (146), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+      L F++        A         E+   + +E 
Sbjct: 505 ALIYCNQNHTARVLFELLAEMGKRDADLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 564

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 565 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 624


>gi|402595090|gb|EJW89016.1| type III restriction enzyme [Wuchereria bancrofti]
          Length = 1410

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 249/522 (47%), Gaps = 66/522 (12%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V    +L+ALT ++  +    ER E +GD++LK+ V+ +LF   P++HEG+L+  R + V
Sbjct: 889  VSPCTLLQALTLSNASDGISLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEV 948

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFD------EDTKDGDSSLFDQEK 1494
            SN  LY+      L S I   +F P+  W  P   P  D       D ++ D  + +  +
Sbjct: 949  SNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFIENVLE 1008

Query: 1495 SVAEDKLGTDKNYNEYEDDDME-----------------------DGE----LEGDSSSY 1527
              A +   T K    +++ D                         DGE    L  +  + 
Sbjct: 1009 GKAVEGQETVKIPTGWDEADRNGQVRRIANGIETIEFPKNMTTSWDGEEITPLPYNLLTQ 1068

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP----SRPACVP 1583
            + L  K++AD VE+LIG + +E G  A    MKW+G++V ++P ++  P          P
Sbjct: 1069 QSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTEPVQMEQPLLRFIDTTDQP 1128

Query: 1584 ESVLRSVD-------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
            +  LR ++       F  LED +  +F DR  L++A THAS   + ++ CYQRLEF+GDA
Sbjct: 1129 DKSLRKLNDLWIQFQFSKLEDCIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGDA 1188

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD++IT+ LF   ++  PG LTDLR+A VNN  FA +AVK+  H H       L   I 
Sbjct: 1189 VLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMIE 1248

Query: 1696 DFVKEVLEE-LLKPGFN-------------SFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
             FV    E+ L    FN                  D + PK +GDI ES+AGAI+LDSGR
Sbjct: 1249 KFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSGR 1308

Query: 1742 DTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
              ++VW+VF  L+   +       P  P+REL E   ++A   + +         V V I
Sbjct: 1309 SLNIVWRVFYNLMKETIDECCSNPPRSPIRELLEMEPERARFSKLERILETGKVRVTVDI 1368

Query: 1800 DGVQVGVAQNPQKKMAQKLAARNALAVL----KEKETAEAKE 1837
             G           ++A+  AA+ AL  L    KEKE    KE
Sbjct: 1369 QGKCRFTGMGRSYRIAKCTAAKRALRYLRSLKKEKERVAGKE 1410



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 12/151 (7%)

Query: 883  YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
            Y VESTGA V+L +A+ L++ YC++LPSD ++ L P+  +   E  G    Y  +L LP 
Sbjct: 31   YTVESTGAQVTLTTAISLVNRYCAKLPSDIFTRLVPQNTI-VPETIGDRVMYRAELLLPI 89

Query: 943  NAPFE---KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND 999
            N+P +   KL+ P+  S +LAQ AV L AC++LH+     D LLP          +D+ D
Sbjct: 90   NSPIKETIKLKKPL-ESKKLAQMAVALEACRRLHKRKELNDYLLPVGKDTIMLTALDE-D 147

Query: 1000 EGEPLP------GTARHREFYPEGVADILQG 1024
              E +P      G+AR R+ Y + +A  L  
Sbjct: 148  PDEFIPNMSYKVGSARRRQLYDKRMAKALHN 178



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 1362 MRRVESMLLAIQ---LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLK 1414
            +R++  + +  Q   L+D I Y     + +L+A T AS  +   T CY+R E LGDA L 
Sbjct: 1132 LRKLNDLWIQFQFSKLEDCIGYRFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLD 1191

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            +V++RFLF        G LT +R  +V+N +    A+      +  A
Sbjct: 1192 YVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIA 1238



 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRF------EHSEEQEGEGEEI 1328
            ++ ++ DY+ QKY + +  ++QPL+     S   NLL PR         +EE+  E   I
Sbjct: 391  KFITFNDYFIQKYNIIIYDQEQPLLDVDYTSSRLNLLMPRHWSRSKSRVTEERSSESGGI 450

Query: 1329 LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
                  V   PEL  +HP+  SL      LP+++ R+ S+LLA +L++ +
Sbjct: 451  SQGQILV---PELVDVHPIAASLWNVIAALPTLLYRINSLLLADELRELV 497


>gi|169610828|ref|XP_001798832.1| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
 gi|160702165|gb|EAT83689.2| hypothetical protein SNOG_08521 [Phaeosphaeria nodorum SN15]
          Length = 1443

 Score =  214 bits (545), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 192/702 (27%), Positives = 312/702 (44%), Gaps = 152/702 (21%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ+++  +AK +NTIA L+TG  + +  +                             
Sbjct: 49  RDYQMELFLRAKMQNTIAVLDTGTDQGVEGI----------------------------- 79

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
                              G MGQ  +  Q W + F    V+V TAQ+L++ + HS + +
Sbjct: 80  ------------------SGAMGQSLFQKQTWDKLFAVNMVIVCTAQVLVDCMMHSFMSI 121

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ-VDC 482
             +NLLI DE HHA   HPY+ VM ++Y H     KRP +F MTASPV++KG S++ V  
Sbjct: 122 SRMNLLIFDEAHHAKSNHPYARVMKDYYAHELDTSKRPRIFAMTASPVDVKGQSAEHVRE 181

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLKQMEVAV 540
           A +   LE+ L S + T  D       +  P E V  Y +  + +   LH+++K      
Sbjct: 182 AAR--ELETLLHSRIATTSDSALARNSITRPEEEVAVYTRLRNEFETPLHQKVK------ 233

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
                     +K+        G     R+++             +  KL A      ELG
Sbjct: 234 ----------AKY--------GDVAPFRKLF-------------ITAKLHA-----SELG 257

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD--AKVV 658
           +W A  +  SF  A +   +   + ++K+  S                   K+D  A  +
Sbjct: 258 RW-ASDMYWSFAFADEQSRKLQIREELKYNRS-------------------KRDWSAAEL 297

Query: 659 DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGA-AVADGKVTPKVQSLIKIL-LKY 716
           D++   ++  T  +++ E                IGA  +++  ++ KV  L   L L Y
Sbjct: 298 DAQMARLKEATAFVQQYE----------------IGAPTLSEQDLSSKVMKLQYWLNLYY 341

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFVKSASLIGHNNSQEMRTFQMQE--- 771
           + T   R I+FVE+   A +L  +F  +  P+L       L+G NN        ++    
Sbjct: 342 ERTTLARCIVFVEKRHTAQLLKLIFDHIGGPNL---HCDVLVGINNRAGEENVSLRSQIL 398

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
           T+ KFR G +  L ATSVAEEGLDI QCN+V+RFDL +T++ Y+QSRGRAR   S Y+ M
Sbjct: 399 TLQKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGRARHRNSKYLHM 458

Query: 832 IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT----SRLISVDAVPGTVYQVES 887
           +E  N  H   L NAR+ E  +R+   + T    L D     + LI+++      Y  E 
Sbjct: 459 LEAENKEHTERLMNARHDENIMREFCKDLTHDRQLGDVEQEKAELIALEDKLFPSYTDEK 518

Query: 888 TGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIM--ERHEKPGGPTE--YSCKLQLPC 942
           +GA ++  S++ ++  + +  PS D  ++ +P +++  +  + P  P    + C++ LP 
Sbjct: 519 SGAKLTYRSSLSILSHFVATYPSPDHNTMAQPTYVVNPKISDDPRDPQRNGFVCEVILPE 578

Query: 943 NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           + P   + G V S   +A+ +     C +L       + LLP
Sbjct: 579 HCPIISMVGQVYSRKTIAKCSAAFKMCIELRRKDHLNEFLLP 620



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 210/513 (40%), Gaps = 106/513 (20%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   + + +N L+   E  E++E    E        ++ PE   I  L    V   
Sbjct: 866  QPVLQVEKIPFRRNHLA-NVEDKEKKELANLE-------TYICPEPLHISNLATPFVVMC 917

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS------CQETFC-------- 1401
              LP+I+ R ES L+A+   D ++  V  +  LEALT  S       +E           
Sbjct: 918  YVLPAIIHRFESYLIALDACDVLDLKVSPALALEALTKDSDNSEEHGEEKINFKSGMGPN 977

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG------- 1454
            YER E LGD +LK   S  +F++ P+++E +    R  M+ N  L + A+ K        
Sbjct: 978  YERLEFLGDCFLKVATSLSVFVQQPEENEFEFHVRRMLMLCNQNLMETAVGKKKVASANG 1037

Query: 1455 ------LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
                  L  Y++ D F+   W   G+                         KL   K   
Sbjct: 1038 TERDLQLYKYVRTDAFSRRNWYPEGL-------------------------KLLRGKGLK 1072

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE---GGKDAAN---HLMKWI 1562
            + E+D +      GD         K++ADV EA IG  +++   GG+   N     +K +
Sbjct: 1073 KTEEDWLNVTHNLGD---------KSVADVCEAFIGAAFMQHHKGGQWTPNDWDEAVKAV 1123

Query: 1563 GIQVESD-------PEEVGCPSRPAC-VPESVLRSVDF-HALEDALKIKFKDRGLLVEAI 1613
             +   SD        +     ++P      +    +D  H +E     +F+   LL  A 
Sbjct: 1124 KLFANSDDHLMEKWTDYYAAYTKPKYQTAGATATQLDLAHKIEMKHPYRFRYPRLLRSAF 1183

Query: 1614 THASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
             H S+P     +  YQRLEF+GD++LD     HLF+ Y +  P  LT+ +   V+N+   
Sbjct: 1184 IHPSQPFMWENIPSYQRLEFLGDSLLDMAFIMHLFYKYPDKDPQWLTEHKTPMVSNKFLG 1243

Query: 1672 RVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLGDIVES 1730
             V                   QIRD+V EV E E    G   + +   + PK L D++E+
Sbjct: 1244 AV-------------------QIRDYVYEVEEAEREANGAVDYWVSVSEPPKCLADVIEA 1284

Query: 1731 IAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
               AIF+DS  D +VV + F   L P     TL
Sbjct: 1285 FVAAIFVDSEFDFNVVQKFFDLHLKPFFLDMTL 1317


>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
 gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
          Length = 2050

 Score =  214 bits (544), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 169/501 (33%), Positives = 255/501 (50%), Gaps = 61/501 (12%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S +L+ALT ++  +    ER E +GD++LK+ V+  L+  +P  HEG+L+ +R + 
Sbjct: 1548 PSP-SILLQALTMSNANDGINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLSHLRSRQ 1606

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG-VLP------VFDEDTKDGDSSL--- 1489
            +SNL LY+   ++ L   + A +F PS  W  PG V+P      + +     G  ++   
Sbjct: 1607 ISNLNLYRLGRARRLGGLMVATKFEPSDNWLPPGYVVPPGLERALIESGLPAGHWNIGAL 1666

Query: 1490 -----FDQE---KSVAEDKLGTDKNYNEYEDDDMEDGELEGDS-SSYRVLSS-----KTL 1535
                  D+E   +++AE +    K     E+   E+  L+      Y +L+      K++
Sbjct: 1667 AGLTQMDEEEIRQTLAERR----KKVRNLEEVLAEESGLDAAPYVPYNLLTQHSIPDKSI 1722

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP-----ESVLRSV 1590
            AD VEALIG Y V  G  A    M W+G++V    +      R    P     ES L S 
Sbjct: 1723 ADCVEALIGAYLVSCGPRATLLFMSWLGLEVLPR-DRTAEALRDVSAPLYRTLESPLVSP 1781

Query: 1591 D-----------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
            D           + A E  +  +F+DR  L++A THAS   + ++ CYQRLEF+GDAVLD
Sbjct: 1782 DDGSALAQLLSGYDAFEARIGYRFRDRAYLLQAFTHASYHYNRLTDCYQRLEFLGDAVLD 1841

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            +LIT+HL+       PG LTDLR+A VNN  FA +AVK+  H + ++ S  L   I+ FV
Sbjct: 1842 YLITRHLYDDPQRHSPGTLTDLRSALVNNTFFASLAVKYDFHRYFKNVSPGLFAVIQRFV 1901

Query: 1699 KEVL--------EELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
            +           E+            + + PK LGDI ES+AGAIFLDS      VW+V+
Sbjct: 1902 ETKCHSDGFRYHEKYYLEEEECEEAEEVEVPKALGDIFESVAGAIFLDSNMSLDTVWRVY 1961

Query: 1751 QPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLAT-VEVYIDGVQVGVA 1807
              ++ P +      +P  P+REL E   Q A+    + + +G +   VEV+  G  VGV 
Sbjct: 1962 YAMMKPEIEYFSTHVPKSPIRELLELEPQTAKFERAEMTLNGKVRIRVEVFGKGRFVGVG 2021

Query: 1808 QNPQKKMAQKLAARNALAVLK 1828
            +N  K++A+  AA+ AL  LK
Sbjct: 2022 RN--KRIAKCTAAKRALRALK 2040



 Score =  132 bits (332), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 143/269 (53%), Gaps = 33/269 (12%)

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
            + +E + KFR     LLVATSV EEG+++ +CN+V+RFD  + + AY+ S+G+A+   S 
Sbjct: 610  RQEEVLQKFRARECNLLVATSVVEEGIEVPRCNLVVRFDPPENLRAYMLSKGKAKAAHSR 669

Query: 828  YILMIERGNLSHATFLRNA---RNSEETLRKEAIERTDLSHLKDTSRLISVDAV------ 878
            Y +++ R     A FL +    R +E+ L    +ER   SH++DT+    VD        
Sbjct: 670  YFVLVPREE--SARFLEDLHDHRTTEQIL----LER---SHVEDTTLDEEVDPAFADSLK 720

Query: 879  -PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG--GPTEYS 935
             P    + E     VS+++A+ L++ YC++LPSD ++ L P   M      G    T Y 
Sbjct: 721  PPYKPLEAED-APKVSMSTAIALVNRYCAKLPSDTFTRLTPTSSMTEVNVEGDRDTTLYR 779

Query: 936  CKLQLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEK 994
            C L LP N+P ++ + G       LA+QAV L  C++LH+MG   D L+P +G    +  
Sbjct: 780  CSLHLPINSPLKRCIVGDPMPGKLLAKQAVALKTCEELHKMGELDDNLVP-QGKEAMRLA 838

Query: 995  VDQN---------DEGEPLPGTARHREFY 1014
            +DQ+           G P PGT + R++Y
Sbjct: 839  LDQSAGRFPEEELQPGAPRPGTTKRRQYY 867



 Score = 73.2 bits (178), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I +++  +S FP          + ++  YY++KY + ++  +QPL+     S   
Sbjct: 1054 FYVAEICHDLNPKSDFPDAG-------FETFDAYYREKYDIRVVDGRQPLLDVDHTSARL 1106

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            NLL+PR+           SE+ +    E L +     L PELC +HP P SL R A  LP
Sbjct: 1107 NLLTPRYVNRKGVTLPTSSEQTKRAKRESLQQKQ--ILVPELCLVHPFPASLWRKAVCLP 1164

Query: 1360 SIMRRVESMLLAIQLK 1375
             ++ R+ S+LLA QL+
Sbjct: 1165 CVLYRMNSLLLAEQLR 1180



 Score = 67.8 bits (164), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 51/319 (15%)

Query: 308 QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPKVPL 363
           ++++L+ AK +N+I FL   +GKT + V+L++ +      D++   K++L   LVP    
Sbjct: 35  EVELLDTAKGQNSIVFL--SSGKTFMVVMLVKELAYQVRRDVESGGKRVLV--LVPSAES 90

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             +  +++ + T      +     + DF       ++F    VLV+T +       H  +
Sbjct: 91  GTRHQKMMEDYTDLKSAFFSAPDNRTDF------PKQFAEHHVLVLTPEAFA----HHFV 140

Query: 423 K---------MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           +         ++A+NL++ D+CH A+++  Y  V++ F      E R  V G+ A P+ +
Sbjct: 141 EADADIAETLIDAVNLVVFDDCHVALREAAYGPVLA-FLLDFVAEGRMRVLGL-APPLAV 198

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
           +     +  A  +   +  L S  CT  +   L K+   P E VVEY          E L
Sbjct: 199 RRQRPALLEAEILELEDG-LQSTACTSSELTVLSKYGSRPRETVVEYASYCGNGEGREAL 257

Query: 534 KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             +   ++EA           F+G ++    E  R     S+R            L  + 
Sbjct: 258 GTILRLLDEA---------MAFLGEKEGHLVERERAALRQSQRY-----------LVELC 297

Query: 594 YALGELGQWCAYKVAQSFL 612
           Y L  LG WCA +V + FL
Sbjct: 298 YTLVTLGPWCAREVTELFL 316


>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
          Length = 364

 Score =  214 bits (544), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/359 (37%), Positives = 206/359 (57%), Gaps = 24/359 (6%)

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            +PE    PS+      S+  SV+  A+E  +  KF+++ LL EA+TH+S   S  + YQR
Sbjct: 17   EPEFFSYPSK------SMEASVE--AVERIINYKFRNKKLLEEALTHSSYTDS--ASYQR 66

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GDA L   ++ ++F +Y +L PG+L+ +RAA ++ E  ARVAV+  L+ ++RH ++
Sbjct: 67   LEFIGDAALGCALSNYVFLAYPSLDPGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAA 126

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            ALD ++R+F   V EE    G +    G  KAPK L DIVES+A AI++D   D  V+W 
Sbjct: 127  ALDDKVREFALAVQEE----GDSVLYGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWV 182

Query: 1749 VFQPLLDPMVTPETLPM--HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGV 1806
            +F+ LL+P+VT E L     PV  L E CQ+  + ++ K  R G+     VY+ G  +  
Sbjct: 183  IFRGLLEPIVTHEALQQQPQPVTLLYELCQKDGKHVDIKHWRKGSKNIASVYVGGKFIAS 242

Query: 1807 AQNPQKKMAQKLAARNALAVL--KEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLR 1864
              + +K++A+  AA+ AL  L  K K+T   +   + NG    +G     +Q L++ C +
Sbjct: 243  GSSDEKEIAKLNAAKEALQKLSSKLKDTEMTQNNLEINGSCEIDG----AKQKLHEFCSK 298

Query: 1865 RNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
            + WP P YR  +E GPAH K F  +V + T D     +  G+  P VK A++SAA  ++
Sbjct: 299  KKWPKPSYRIEKEVGPAHEKGFLCSVHIETVDGVLVMQ--GDTKPRVKDAENSAASFMI 355



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 1378 INYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            INY     K+LE ALT +S  ++  Y+R E +GDA L   +S ++FL YP    GQL+ +
Sbjct: 39   INYKFRNKKLLEEALTHSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLI 98

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            R   +S   L + A+  GL  Y++ +  A         L V +E    GDS L+
Sbjct: 99   RAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEE----GDSVLY 148


>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  213 bits (541), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 195/334 (58%), Gaps = 16/334 (4%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  +  KF+++ LL EA+TH+S   S  + YQRLEF+GDA L   ++ ++F +Y +L 
Sbjct: 7    AVERIINYKFRNKKLLEEALTHSSYTDS--ASYQRLEFIGDAALGCALSNYVFLAYPSLD 64

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            PG+L+ +RAA ++ E  ARVAV+  L+ ++RH ++ALD ++R+F   V EE    G +  
Sbjct: 65   PGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEE----GDSVL 120

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
              G  KAPK L DIVES+A AI++D   D  V+W +F+ LL+P+VT E L     PV  L
Sbjct: 121  YGGSVKAPKFLADIVESVAAAIYVDCNFDLQVLWVIFRGLLEPIVTHEALQQQPQPVTLL 180

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL--KE 1829
             E CQ+  + ++ K  R G+     VY+ G  +    + +K++A+  AA+ AL  L  K 
Sbjct: 181  YELCQKDGKHVDIKHWRKGSKNIASVYVGGKFIASGSSDEKEIAKLNAAKEALQKLSSKL 240

Query: 1830 KETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYA 1889
            K+T   +   + NG    +G     +Q L++ C ++ WP P YR  +E GPAH K F  +
Sbjct: 241  KDTEMTQNNLEINGSCEIDG----AKQKLHEFCSKKKWPKPSYRIEKEVGPAHEKGFLCS 296

Query: 1890 VRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLL 1923
            V + T D     +  G+  P VK A++SAA  ++
Sbjct: 297  VHIETVDGVLVMQ--GDTKPRVKDAENSAASFMI 328



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 1378 INYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            INY     K+LE ALT +S  ++  Y+R E +GDA L   +S ++FL YP    GQL+ +
Sbjct: 12   INYKFRNKKLLEEALTHSSYTDSASYQRLEFIGDAALGCALSNYVFLAYPSLDPGQLSLI 71

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            R   +S   L + A+  GL  Y++ +  A         L V +E    GDS L+
Sbjct: 72   RAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFALAVQEE----GDSVLY 121


>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
            malayi]
 gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
            malayi]
          Length = 1856

 Score =  213 bits (541), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 247/522 (47%), Gaps = 66/522 (12%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V    +L+ALT ++  +    ER E +GD++LK+ V+ +LF   P++HEG+L+  R + V
Sbjct: 1335 VSPCTLLQALTLSNASDGINLERLETVGDSFLKYAVTDYLFHTNPEQHEGKLSFARSKEV 1394

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFD------EDTKDGDSSLFDQEK 1494
            SN  LY+      L S I   +F P+  W  P   P  D       D ++ D  + +  +
Sbjct: 1395 SNCNLYRLGRKHNLPSLIIGSKFDPNDGWLPPCYAPTSDFKAPNTLDAEERDKFIENVLE 1454

Query: 1495 SVAEDKLGTDKNYNEYEDDDME-----------------------DGE----LEGDSSSY 1527
              A +   T K    +++ D                         DGE    L  +  + 
Sbjct: 1455 GKAVEGQETVKIPTGWDEADRNGQVRRIANGIETIEFPKNMTTSWDGEEITPLPYNLLTQ 1514

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP----SRPACVP 1583
            + L  K++AD VE+LIG + +E G  A    MKW+G++V ++P ++  P          P
Sbjct: 1515 QSLGDKSIADAVESLIGAHLLELGPTATLKFMKWLGLKVLTZPVQMEPPLLRFIDTTDQP 1574

Query: 1584 ESVLRSVD-------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDA 1635
            +  LR ++       F  LED +  +F DR  L++A THAS   + ++ CYQRLEF+GDA
Sbjct: 1575 DKSLRKLNDLWIQFQFSKLEDCIGYRFHDRAYLLQAFTHASYYKNRITGCYQRLEFLGDA 1634

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD++IT+ LF    +  PG LTDLR+A VNN  FA +AVK+  H H       L   I 
Sbjct: 1635 VLDYVITRFLFQHSAHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMIE 1694

Query: 1696 DFVKEVLEE-LLKPGFN-------------SFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
             FV    E+ L    FN                  D + PK +GDI ES+AGAI+LDSGR
Sbjct: 1695 KFVCLCAEKNLSSANFNEEMYMVTTEEEIDEGEEEDIEVPKAMGDIFESVAGAIYLDSGR 1754

Query: 1742 DTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
              + VW+VF  L+   +       P  P+REL E   ++A   + +         V V I
Sbjct: 1755 SLNTVWRVFYNLMKETINECCSNPPRSPIRELLEMEPERARFSKLERILETGKVRVTVDI 1814

Query: 1800 DGVQVGVAQNPQKKMAQKLAARNALAVL----KEKETAEAKE 1837
             G           ++A+  AA+ AL  L    KEKE    KE
Sbjct: 1815 QGKCRFTGMGRSYRIAKCTAAKRALRYLRSLKKEKERVAGKE 1856



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 152/319 (47%), Gaps = 35/319 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQ+++L++A K+N I  L TG+GKT IAVLLI+     L    +N    A FLV KV 
Sbjct: 16  RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDT----KQVLVMTAQILLNILR 418
           LV QQA  I   T   VG   G + QD W       +FDT     +V V+TAQI L++L 
Sbjct: 76  LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPA---KFDTFIALHEVTVLTAQIFLDLLD 132

Query: 419 HSIIKMEAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
           H    M    ++I DECHH +  KHPY L+M  +   T  + RP + G+TAS ++ K   
Sbjct: 133 HGFFNMSNAAVIIFDECHHVLGSKHPYRLIMHRYGQLTEVD-RPRILGLTASLISSKIPP 191

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
           S ++  ++   LE  + S + T  D   + K+   P E V+        +    +  +  
Sbjct: 192 SNLEHLLE--KLERIMHSSIETASDLVSISKYGARPKEYVI---MCHDFFCCTCETSKKV 246

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
           ++  E+ ++   +   +F    D   +   + V     RT+S                L 
Sbjct: 247 ISTLESLRTFCLKCT-EFHPEFDVDPR---KPVLEAVSRTKS---------------VLE 287

Query: 598 ELGQWCAYKVAQSFLTALQ 616
           +LG WCA+K+ Q F   L+
Sbjct: 288 QLGPWCAWKLCQLFQRQLK 306



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 11/123 (8%)

Query: 722 FRAIIFVERVVAALVLPKVFAELP-----SLSFVKSASLIGHNNS-----QEMRTFQMQE 771
           F  IIFVE+   A VL  +   +         ++ S  +IG+N++     + M   + QE
Sbjct: 381 FCGIIFVEQRYVAYVLNTLIRAISRWDNDKFGYLVSDFVIGYNSANIGTEETMALHKRQE 440

Query: 772 TIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            +  KFR   + LL+ATSV EEG+D+RQCNVVIRFD      AY+QS+GRARK G+ Y L
Sbjct: 441 LVLRKFRQRHLNLLIATSVLEEGVDVRQCNVVIRFDRPTDYRAYVQSKGRARKDGASYFL 500

Query: 831 MIE 833
           ++E
Sbjct: 501 LVE 503



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 1362 MRRVESMLLAIQ---LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLK 1414
            +R++  + +  Q   L+D I Y     + +L+A T AS  +   T CY+R E LGDA L 
Sbjct: 1578 LRKLNDLWIQFQFSKLEDCIGYRFHDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLD 1637

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            +V++RFLF        G LT +R  +V+N +    A+      +  A
Sbjct: 1638 YVITRFLFQHSAHYSPGVLTDLRSALVNNTIFASLAVKYNFHKHFIA 1684



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRF------EHSEEQEGEGEEI 1328
            ++ ++ DY+ QKY + +  ++QPL+     S   NLL PR         +EE+  E   I
Sbjct: 833  KFVTFNDYFIQKYNIIIYDQQQPLLDVDYTSSRLNLLMPRHWSRSKSRVTEEKSSESGGI 892

Query: 1329 LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
                  V   PEL  +HP+  SL      LP+++ R+ S+LLA +L++ +
Sbjct: 893  SQGQILV---PELVDVHPIAASLWNVIAALPTLLYRINSLLLADELRELV 939



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 11/108 (10%)

Query: 926  EKPGGPTEYSCKLQLPCNAPFE---KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
            E+ G    Y  +L LP N+P +   KL+ P+  S +LAQ AV L AC++LH+     D L
Sbjct: 521  ERIGDRVMYRAELLLPINSPIKETIKLKKPL-ESKKLAQMAVALEACRRLHKRKELNDYL 579

Query: 983  LPDKGSGEQQEKVDQNDEGEPLP------GTARHREFYPEGVADILQG 1024
            LP          +D+ D  E +P      G+AR R+ Y + +A  L  
Sbjct: 580  LPVGKDTIMLTALDE-DPDEFIPNMSYKVGSARRRQLYDKRMAKALHN 626


>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
            pisum]
          Length = 1609

 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 160/506 (31%), Positives = 251/506 (49%), Gaps = 85/506 (16%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+ +R
Sbjct: 1118 DHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLR 1177

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG----------------------- 1473
             + VSNL LY+    K     + + +F P   W  P                        
Sbjct: 1178 SKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNM 1237

Query: 1474 -VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSYRVL 1530
              LP F + T        + E+ + + K+G       + ++D+E+  L    +  +   +
Sbjct: 1238 ITLPTFKDPTDK------EIEEVIQQFKVG-------FSNEDIENTPLFVPYNLVTQHSI 1284

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPESVLR 1588
              K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     +LR
Sbjct: 1285 PDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SPLLR 1341

Query: 1589 SVD------------FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDA 1635
            +VD            F + E  L   F+DR  L++A+THAS  P+    CYQRLEF+GDA
Sbjct: 1342 NVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDA 1401

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD+LIT+HL+       PG LTDLR+A VNN  FA +AV++  H + +H S  L   + 
Sbjct: 1402 VLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSPGLSDVVC 1461

Query: 1696 DFVKEVLEE---LLKPGFNSFGLGDC------KAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
             FV  + EE    +   F   G  DC      + PK LGD+ ES+AGAI+LDS      V
Sbjct: 1462 RFVT-IQEENGHTIDEEFYFLGEDDCEEAEDVEVPKALGDVFESVAGAIYLDSNMSLDTV 1520

Query: 1747 WQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLA-------TVEV 1797
            W+V+  +++  +    + +P  P+REL E   + A     K S+   LA        VE+
Sbjct: 1521 WKVYHKIMENEMEQFSKNVPKSPIRELLELEPETA-----KFSKPEKLADGRRVRVVVEI 1575

Query: 1798 YIDGVQVGVAQNPQKKMAQKLAARNA 1823
            +  G   G+ +N   ++A+  AA+ A
Sbjct: 1576 FGKGEFKGIGRN--YRIAKCTAAKCA 1599



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 40/338 (11%)

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAEL------------PSLSFVKSASLIGHNNSQEMR 765
            + E   AII V   + A +L  +F +L            P  +  K A  I      E+ 
Sbjct: 185  YEETICAIILVNNKMTASILYYLFLDLKNSNKEDFGWIQPQYTVDKEADPITEPKEFEIE 244

Query: 766  TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
              + +ET+ +FR     +L+ T V E G+D+ +CN+VI +++  +  +Y++S+ RA+   
Sbjct: 245  HKKQEETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLD 304

Query: 826  SDYILMIERGN----LSHATFLRNARN---SEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            + YILM +       LS     ++      S  TL+   +E+   +   D          
Sbjct: 305  AHYILMFDEDATSNILSRLKLYKDINQMLLSHCTLKDIDMEKETYA---DRYNWFVTPFK 361

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            PG     +   A V + +A+GL++ YC++LPSD ++ L P +  +       P  + C +
Sbjct: 362  PGK----KEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPM-FVCSI 416

Query: 939  QLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP------------D 985
            +LP N+P +  + G       LA++   L  C++LH  G   D L P            D
Sbjct: 417  RLPINSPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQPITKESFHALFNAD 476

Query: 986  KGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            +   + ++ +   D  EP PGT + R++Y + +A+ L 
Sbjct: 477  EVLPDAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALN 514



 Score = 61.6 bits (148), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 20/138 (14%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLE-YSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            FYV  I   +  +S FP      G +E Y ++ DYY  KY +++   +QPL+     S  
Sbjct: 699  FYVAEICTHLNPKSPFP------GSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDHTSAR 752

Query: 1308 KNLLSPRFEHSE----------EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             N L+PR+ + +           +  + + +  K   V   PELC +H  P S+ R A  
Sbjct: 753  LNFLTPRYMNRKGVILPTSSDATKRAKRDNLSQKQILV---PELCNVHLFPASMWRKAVS 809

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LP I+ R+ ++LLA +++
Sbjct: 810  LPCILYRINALLLADEIR 827


>gi|350855011|emb|CAZ36047.2| dicer-1, putative [Schistosoma mansoni]
          Length = 2319

 Score =  212 bits (540), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 177/576 (30%), Positives = 267/576 (46%), Gaps = 123/576 (21%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P + IL+ALT +   +    ER E +GD++LK+VV+  L+L YP+ HEG+L+ +R ++
Sbjct: 1746 PGPTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRI 1804

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV---------------------LPVF 1478
            V N  LY+   +K LQ+ +   +F P   W  PG                      L ++
Sbjct: 1805 VCNSNLYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQDKRLNNEIIKKFESNRNLVIW 1864

Query: 1479 DEDTKDGDSSLFDQEKSVAEDKLGTDKNY--NEYEDDDMEDGELEGDSSSYRV-----LS 1531
              DT   D  L + +  + E+K+   +N+  +E++ +D +    +  ++ Y +     + 
Sbjct: 1865 STDTLMDDEVLRNID-FIDENKIKPIENFPISEWDPNDPKVLHAQHLNNQYLITIQQAIP 1923

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR-PACVPESVLRSV 1590
             K++AD VEALIG Y    G+ +A  LM+W GI      +     +R P  +P+S     
Sbjct: 1924 DKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDT 1983

Query: 1591 D--------------FHALEDALKIKFKDRGLLVEAITHASRP----------------- 1619
            D              F  LE +L   FKD  LL++A TH S                   
Sbjct: 1984 DENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNL 2043

Query: 1620 --SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
              S+ + CYQRLEF+GDAVLD++IT+ L+       PG LTDLR+A VNN  FA +AV+ 
Sbjct: 2044 MFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRI 2103

Query: 1678 KLHVHLRHGSSALDRQIRDFV---KEVLEELL------------KPGFNSF--------- 1713
             LH + R  S  L   I  FV   K+V ++ L            KP   ++         
Sbjct: 2104 GLHKYFRASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGK 2163

Query: 1714 ----------GLG---------DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
                        G         D + PK L DI ES+AGAIFLDS      VWQ+F P++
Sbjct: 2164 SNNANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIM 2223

Query: 1755 DPMVTPET--LPMHPVRELQERCQQQAEGLEYKASR---SGNLAT-VEVYIDGVQVGVAQ 1808
               +   T  +P  PVR+L E    + EG +++ +R    G ++    V   G   GV +
Sbjct: 2224 KERIERYTACIPKSPVRQLLEL---EPEGTKFERARRMVDGRISVCAHVLGKGRFYGVGR 2280

Query: 1809 NPQKKMAQKLAARNALAVLKE----KETAEAKEKGD 1840
            N   ++A+ LAA+ AL VL+      +T      GD
Sbjct: 2281 N--YRLAKSLAAKRALRVLRRLNQPSQTTPVTTNGD 2314



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 37/146 (25%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            +YV  IR +M+  S FP  +       + ++A YY  KY   +    QPL+         
Sbjct: 1288 YYVAIIRNDMSPLSPFPSDK-------FRNFAAYYINKYNALITTNNQPLLDVDLTVLRL 1340

Query: 1309 NLLSPRF------------------------------EHSEEQEGEGEEILDKTYYVFLP 1338
            NLL PR+                              ++ ++Q  +  +  D T    L 
Sbjct: 1341 NLLIPRYMNIYGHNNTNANDNNGDINNSKSNNVYTHKQYYQQQNHDDHQGEDLTNKQLLV 1400

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRR 1364
            PELCF H  P S+ R A  +PSI+ R
Sbjct: 1401 PELCFRHSFPASVWRKAVCIPSILYR 1426



 Score = 45.8 bits (107), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 770 QETIAKFRDGRVTLLVAT-----SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           +ETI  FR G + LLVAT     +V   G ++ +CN+VI   L  ++  Y+ S+ R+R
Sbjct: 630 EETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSR 687


>gi|226510363|ref|NP_001140816.1| uncharacterized protein LOC100272891 [Zea mays]
 gi|194701228|gb|ACF84698.1| unknown [Zea mays]
 gi|413948833|gb|AFW81482.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
          Length = 376

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 188/335 (56%), Gaps = 4/335 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L+ +F DR LL EA+TH S  S G   YQRLEFVGDA L    +  L+ +   L P
Sbjct: 44   VERLLRYQFCDRALLEEALTHQSF-SDGALSYQRLEFVGDAALGLAFSNFLYLTNPTLGP 102

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFNSF 1713
            G L+ LRAA ++ E  ARVAV+H L+  LR     LD  +  F++ V +EL+       +
Sbjct: 103  GALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQELMHDLATAPY 162

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
            G    KAPKVL DIVE+IA A+++D   D   +W+V + L +P++T ET+   PV  L E
Sbjct: 163  GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVTTLHE 222

Query: 1774 RCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETA 1833
             CQ+  +  ++K  +   +  V V++ G  VG+  + QK +A+  AAR+AL  L      
Sbjct: 223  LCQKHGKVAQFKTWQKDGMIVVNVFVGGEMVGLGSSEQKVIAKLNAARDALGKLIGGAKQ 282

Query: 1834 EAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVN 1893
            +       NG           +Q L + C+R++WP P+++  +EGGPAH + F  +V+V+
Sbjct: 283  QVLINCAANGLVDDIAELRECKQKLIEQCIRKHWPKPIFKLEKEGGPAHERNFVCSVQVD 342

Query: 1894 TTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            T    +    +GE M  VK A++SAA  ++ELL K
Sbjct: 343  TQTGTFVT--IGESMSRVKDAENSAAHKMVELLLK 375


>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
          Length = 2192

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 259/546 (47%), Gaps = 104/546 (19%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R
Sbjct: 1648 NHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYENVHEGKLSHLR 1707

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDTKDGDSSLFDQEKS 1495
             + VSNL LY+    K L   + A +F P   W  P   +P      K+ + +L D +  
Sbjct: 1708 SKQVSNLNLYRLGRRKVLGESMIATKFEPHDNWLPPCYYVP------KELEQALIDAKIP 1761

Query: 1496 VAEDKLGTDKNYNEY-------------------EDDDMEDGE-------LEGDSSSY-- 1527
                 L    +  +                    +D D E+GE       LE  +  +  
Sbjct: 1762 ACHWNLADLPDIKQLSSEEICRLVKERALALGLLDDSDNEEGETMKEIQQLETRNDEFIK 1821

Query: 1528 ----------------RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----- 1566
                              +  K++AD VEALIG Y +E G   A  LM W+GI+V     
Sbjct: 1822 NAEYFACFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYE 1881

Query: 1567 ----ESDPEEVGC--------------------PSRPACV----PESVLRSV--DFHALE 1596
                E++P+  G                     P  P  +    P+  L  +   + A E
Sbjct: 1882 VPYDENNPKVPGSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHLLDGYSAFE 1941

Query: 1597 DALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
            D+L      R  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG
Sbjct: 1942 DSLGYH-HSRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPG 2000

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--ELLKPGFNSF 1713
             LTDLR+A VNN  FA +AV+H  H + RH S  L+  I  FV+   +   ++   +   
Sbjct: 2001 ALTDLRSALVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEEYYLI 2060

Query: 1714 GLGDC------KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +C      + PK LGD+ ES+AGAIFLDS      VW+V++ ++ P +     ++P 
Sbjct: 2061 SEDECDEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWKVYRSMMGPEIEQFSNSVPK 2120

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
             P+REL E   + A+  + +    G     TVEV+  G   G+ +N   ++A+  AA+ A
Sbjct: 2121 SPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGTFRGIGRN--YRIAKCTAAKCA 2178

Query: 1824 LAVLKE 1829
            L  LK+
Sbjct: 2179 LRQLKK 2184



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I Y ++ +SSFP        L YS++ +YY +KY +++   KQPL+     S   
Sbjct: 1083 FYVAEICYHLSPKSSFPG-------LNYSTFEEYYYKKYSIQIQNCKQPLLDVDHTSARL 1135

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1136 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILIPELCTIHPFPASLWRAAVCLP 1193

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA +++ ++
Sbjct: 1194 CILYRINALLLADEIRKEV 1212



 Score = 65.9 bits (159), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFV-------KSASLIGHNNSQEMRTFQMQET 772
           A+IF      A +L  +F E     P L+++       K+A  I      E+   + +E 
Sbjct: 496 ALIFCNSKFIAKILYSLFYESIRSDPQLAYINVQYTVDKTADPIKDPKEAEIEHRKQEEV 555

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     LL+ TSV EEG+D+ +CN+VIR++   +  +Y+Q +GRAR   + +IL +
Sbjct: 556 LKRFRMHECNLLIGTSVLEEGIDLPKCNLVIRWNEPVSYRSYVQCKGRARASTAYHILFV 615



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 63/298 (21%)

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLE 950
            V L++A+ +++ YC++LPSD ++ L P +   +  +  G   Y C +++P N+P  E + 
Sbjct: 755  VRLSNAIQMVNKYCAKLPSDTFTKLTPLWRGAKTVR-NGQELYQCTIRMPINSPLKEDIV 813

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQND----------- 999
            G    +  LA++     AC+ LH+ G   D L P      +  + D  D           
Sbjct: 814  GLPMPTEILARRMAAYTACRVLHKAGELDDSLQPIGKESFRAFEADWEDFELESNDAQIV 873

Query: 1000 --EGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSK--LFHLFMYTVKCV----- 1050
                EP PGT + R++Y + +A         S      GSK  L+H+ M T++C      
Sbjct: 874  IENSEPRPGTTKRRQYYYKRIAS------AFSECRPTIGSKVYLYHINM-TLQCPIPEEQ 926

Query: 1051 ---------------NNGISKDPFLTQVSDFAVLF-SSELDAEL-----------ASLKN 1083
                             GI     + +VS F +   S E+   L             L+ 
Sbjct: 927  NTRGRKIYPPEDSPQGFGILTTKLIPKVSAFPIFTRSGEVKVALNLCDERPILNQEQLER 986

Query: 1084 FHVRLMSIVLDV-DVEPYTTPWDP---AKAYLFVPVVSDKSVDPMNELDWDLVEKITK 1137
             H+ +      V  ++ Y   +DP      +  VP ++ +SV     +DW+ ++ I K
Sbjct: 987  IHMFINYTFTKVLRLQKYLMLYDPDAMENCFFIVPTITRESV---VTVDWNFIDTIAK 1041



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 135/315 (42%), Gaps = 27/315 (8%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ+++L  AK++N I  L   + K  IA+ LI  + + L++   K      + +   V
Sbjct: 17  RDYQVELLASAKERNLILCLAHNSSKEFIALKLIHELGSQLRKPAGKRKRTIYISQNDSV 76

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQR---WQREFDTKQVLVMTAQILLNILRHSI 421
           +    +IR+ T   V +       D  DA     W++  D  QV++   +  L+ +    
Sbjct: 77  FN---LIRDLTDLKVINV-----NDLEDADEDYDWEQIVDDYQVIITDERKCLDAIICGY 128

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + +  +NLL++D+CH        S +  ++Y+     ++P + G+     N   +  ++ 
Sbjct: 129 LDLNEVNLLVIDDCHKVYGNEEISKLFIDYYNVC--REKPKILGLAGPLHNAGCIPGRLS 186

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
             ++   LE  L +   T  D   + ++   P E++++    A+  +L   LK  E+ + 
Sbjct: 187 AELE--QLEYCLQAKAETASDIVTVLRYCTKPKEILLQCAPPAN-SNLASYLK--EIVLS 241

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ 601
           +       R     +   D    EEL+ +         D  A+ ++ L      L E+G 
Sbjct: 242 QITFLEDHRYDPSEIYEDDEFL-EELKNI--------PDPRADPLKFLHEFLAVLEEMGP 292

Query: 602 WCAYKVAQSFLTALQ 616
           WCA + A + +  ++
Sbjct: 293 WCADRAALAMIVQIE 307



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 36/184 (19%)

Query: 1374 LKDKINYPVPASKILEALTAAS-CQE--TFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
             +D + Y    S +L+A+T AS C    T CY+R E LGDA L ++++R L+    Q   
Sbjct: 1940 FEDSLGYHHSRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSP 1999

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTK---DGDS 1487
            G LT +R  +V+N +    A+      Y         R  +PG+  V D   +   D   
Sbjct: 2000 GALTDLRSALVNNTIFASLAVRHDFHKYF--------RHLSPGLNDVIDRFVRIQQDNGH 2051

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
             + ++   ++ED           E D+ ED E+            K L DV E++ G  +
Sbjct: 2052 IISEEYYLISED-----------ECDEAEDVEV-----------PKALGDVFESVAGAIF 2089

Query: 1548 VEGG 1551
            ++  
Sbjct: 2090 LDSN 2093


>gi|167046036|gb|ABZ10549.1| dicer 1 [Nematostella vectensis]
          Length = 412

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/394 (35%), Positives = 203/394 (51%), Gaps = 28/394 (7%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L+ALT  S  + F  ER E+LGDA+LK  VS FL+  Y    EG+LT+ +   +SN  L
Sbjct: 20   LLQALTTKSAGDAFDLERLEMLGDAFLKQAVSIFLYCCYKDGDEGKLTKRKTSQLSNRAL 79

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            Y+ A   GL  Y+Q  +     W  P +     E    G      +  S    +  + + 
Sbjct: 80   YRVACRLGLPEYLQNTQLDRVSWTTPSLQAAEVEPV--GSPGKSQKTASNKRCQSASRQP 137

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
             N  E   +E  E   D + ++ +  K++AD VEALIG Y    G   A H + W+G++V
Sbjct: 138  ENRPEMSTLEKPETARDKALHQSIPDKSVADSVEALIGAYLTTCGYQGALHFLDWLGVKV 197

Query: 1567 -ESDPEEVGCP---------SRPACV-----PESVLR-SVDFHALEDALKIKFKDRGLLV 1610
                P     P         +RP        P+ + R +V     E+ +  +F ++  L+
Sbjct: 198  LPESPMSTDGPRASSKYSIFTRPTITEYNSNPQVLKRFAVQLQGFENRIGYEFSNKLYLI 257

Query: 1611 EAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            +A+THAS   + ++ CYQRLEF+GDA+LD L+T+ ++   TNL PG LTDLR A VNN  
Sbjct: 258  QALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNNNI 317

Query: 1670 FARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------ELLKPGFNSFGLGD---CKA 1720
            FA +AVKH  +  L   S     +I  FV  V E      ++ K  F +    D    +A
Sbjct: 318  FAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQISKDPFLTLSNDDEEGIEA 377

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            PKVLGDI ES+AGAIFLDSG D  + W+V+  +L
Sbjct: 378  PKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRML 411


>gi|115387529|ref|XP_001211270.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195354|gb|EAU37054.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1344

 Score =  212 bits (539), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 198/686 (28%), Positives = 305/686 (44%), Gaps = 135/686 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL++ +      D    N   ++ FLV  
Sbjct: 110 REYQIELFERAKVQNTIAVLDTGSGKTLIAVLLLKHVIQTELIDRANGNPPRISFFLVDS 169

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V+R      V H+ G MG D W+ Q W   F+   V+V TA+IL   L ++
Sbjct: 170 VTLVYQQASVLRNNLDQNVAHFFGAMGVDLWNKQTWAEHFEKNMVIVCTAEILNQCLLNA 229

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I M+ INLL+ DE HH  K HPY+ ++ + Y       RP +FGMTASPV+ KG     
Sbjct: 230 YITMQQINLLVFDEAHHTKKDHPYARIIRDSYLRVPPSSRPRIFGMTASPVDTKG----- 284

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D      NLE+ LDS + T      L + V  P+E V  YDK                  
Sbjct: 285 DVLEAARNLEALLDSKIATTSKLTILRQVVNRPNEEVWIYDK------------------ 326

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
               Q +     ++ M +R           +G          ++L    R   +A  ELG
Sbjct: 327 ---LQPTFTSDLYKLMESR-----------FG--------DISHLEPMFRFARHATSELG 364

Query: 601 QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV-SKKDAKVVD 659
            WCA +V   +++AL +D               L K         VEG++  K+ +  + 
Sbjct: 365 TWCADRV---WVSALADD--------------VLPK---------VEGSIGGKRQSTGLG 398

Query: 660 SENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-YQ 717
                V      I+E  EL++SH  +         GA  A   ++ KV+ L K + + + 
Sbjct: 399 QLPKDVHRDITRIKEASELVESHPPNDP-------GAPEA---LSSKVRVLWKEISQCFG 448

Query: 718 HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---RTFQMQ-ETI 773
              + + I+F E+   A VL  +F  L ++  ++   LIG  +S  +    TF+ Q  T+
Sbjct: 449 QETNTKCIVFTEKRYTAKVLFDLFTVL-NVPGLRPGVLIGVRSSDRIGMNVTFRQQILTM 507

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            +FR G +  L AT+VAEEGLDI  CN+V+                           MIE
Sbjct: 508 VRFRTGEINCLFATAVAEEGLDIPDCNLVVS--------------------------MIE 541

Query: 834 RGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDAVPG-----TVYQVE 886
           + N  H + L    ++E+ ++   + +    + H  D       DAV         Y + 
Sbjct: 542 KDNADHESILVQVNDAEKIMQSFCQLLPEDRILHGNDD----DTDAVLDREEWEEPYTLP 597

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
           ST A ++ +SA+ ++  Y S L  +  +  +  +++     P     Y C++ LP  +P 
Sbjct: 598 STAARLTHHSAITVLARYASSLQYENDTSAQVTYVV----LPVN-DAYVCEVILPEKSPI 652

Query: 947 EKLEGPVCSSMRLAQQAVCLAACKKL 972
               G        A++     AC+ L
Sbjct: 653 RGATGMPAMKKSTAKRYAAFEACRLL 678



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 156/368 (42%), Gaps = 66/368 (17%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC-------YE 1403
             P+I+ R+++ L+ ++   K+   +     LEALT  S        Q+          YE
Sbjct: 987  FPAIISRLDAYLIGLEACKKLGLEISLEYALEALTKDSDNTHEHRSQQVHMQRGMGKNYE 1046

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF ++P  +E      R  ++ N  L+  A+ K L  +I++  
Sbjct: 1047 RLEFLGDCFLKMATSISLFNQHPDDNEFDYHVNRMCLICNRNLFNSAVKKELYQFIRSRG 1106

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +   D                  K+G                     
Sbjct: 1107 FSRDTWYPEGLTLLQGRD---------------HSKKIG--------------------- 1130

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEVG-------- 1574
            S S   L+ KT+ADV EALIG   +  G      + ++ +   V+S+             
Sbjct: 1131 SESKHALAEKTIADVCEALIGAALLTPGPQHRFDMGVRAVSAVVDSNEHNAASWRDYISL 1190

Query: 1575 --CPSRPACVPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPSSG--VSCYQRL 1629
               P      P+     +D    +E+ L   F+   LL  A TH S PS+   V CYQ L
Sbjct: 1191 YSIPKYQEQAPDG--SEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSL 1248

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GDA+LD +  + LF  + +  P  LT+ + A V+N+    +AVK  LH HL + SSA
Sbjct: 1249 EFLGDALLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSA 1308

Query: 1690 LDRQIRDF 1697
            L  QI  +
Sbjct: 1309 LQSQITHY 1316


>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
          Length = 1863

 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 172/569 (30%), Positives = 271/569 (47%), Gaps = 77/569 (13%)

Query: 1330 DKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILE 1389
            D++    LP     + P P S  + +Q +   + +     +     + +   V    +L 
Sbjct: 1294 DRSTCQVLPTAAMDVPPRPFSFEKESQTMHGRLLKEREKEIVSHTDEDVGMGVSPCLLLT 1353

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALT ++  +    ER E +GD++LK+  + +L+    ++HEG+L+  R + VSN  LY+ 
Sbjct: 1354 ALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQEQHEGKLSWARSKEVSNCNLYRL 1413

Query: 1450 ALSKGLQSYIQADRF-APSRWAAPGVLPVFD---EDTKDGDSSLFDQEKSVA-------- 1497
                G+   I A++F A   W  P  +P  D    +T D +    + E+ ++        
Sbjct: 1414 GKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMERILSGQTIEEKP 1473

Query: 1498 EDKLGTDKNYNEYED--DDMEDGELEGDSS---------SYRVL-----SSKTLADVVEA 1541
            E+K G D   +E +   D +E    +  +           Y +L     S K +AD +EA
Sbjct: 1474 ENKTGWDLGQDEAKKTVDGIETITFQKQTRILNEDITPLPYNLLTQQNISDKAIADAMEA 1533

Query: 1542 LIGVYYVEGGKDAANHLMKWIGIQV-------ESDPEEVGCPSRPACVPESVLRSVD--- 1591
            LIGV+ +  G +    +M W+G++V       +  P  +     P   P++  +++D   
Sbjct: 1534 LIGVHLLTLGPNPTLKVMNWMGLKVIQKDQATDVQPPLLRFIDTPIN-PDASTKALDNLW 1592

Query: 1592 ----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
                F  LE+ +  +FKDR  LV+A THAS  ++ V+ CYQRLEF+GDAVLD++IT++LF
Sbjct: 1593 QQFQFAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQRLEFLGDAVLDYMITRYLF 1652

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
                   PG LTDLR+A VNN  FA +AVK +   H       L   I  FVK   +   
Sbjct: 1653 EDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMCPGLHHMIEKFVKLCGDRSF 1712

Query: 1707 KPGFNS-------------FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
               FN+                 D + PK LGD+ ES+AGAI+LDSGR+    WQV   L
Sbjct: 1713 DTNFNTEMYMVTTEEEIDEGHEEDVEVPKALGDVFESVAGAIYLDSGRNLDTTWQVIYHL 1772

Query: 1754 LDPMVTPETL----PMHPVRELQERCQQQAEGLEYKASR------SGNL-ATVEVYIDGV 1802
            +   +  ET     P  P+REL E      EG + + S+      SG +  TV+V  +  
Sbjct: 1773 MKGTI--ETCCANPPRSPIRELME-----LEGTKARFSKMERILESGKVRVTVDVGNNMR 1825

Query: 1803 QVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
              G+ +N   ++A+  AA+ AL  L + E
Sbjct: 1826 FTGMGRN--YRIAKATAAKRALKYLHQME 1852



 Score =  187 bits (476), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 261/554 (47%), Gaps = 75/554 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR----SICNDLQRQNKKMLAVFLVPK 360
           R YQ+++L++A KKNTI  L TG+GKT IAVLL++     +   L+   K+  A F+V K
Sbjct: 14  RDYQVELLDKASKKNTIVQLGTGSGKTFIAVLLLKEYGVQMFAPLENGGKR--AFFVVEK 71

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREF-DTKQVLVMTAQILLNILRH 419
           V LV QQA  I   T + VG   G+   + W +     EF     V+V+TAQ LL+++ H
Sbjct: 72  VNLVEQQAAHIEVHTSFKVGQVHGQTSNELWKSTETCDEFMRQNHVVVITAQCLLDLINH 131

Query: 420 SIIKMEAINLLILDECHHAV-KKHPYSLVMSEFYH-TTSKEKRPSVFGMTASPVNLKGVS 477
           + ++++   +LI DECHHA+  KHPY L+MS++     +    P V G+TAS +  K   
Sbjct: 132 AYVRLQDTCVLIFDECHHALGSKHPYRLIMSKYKELKKAGMPVPRVLGLTASLIKEKVAP 191

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV---EYDKAASLWSLHEQLK 534
            ++  + ++  LE+ LDSV+ T  D   L K+   P E ++    ++        +E ++
Sbjct: 192 DKL--SEQLNKLENVLDSVIETASDLVSLSKYGARPFEAIILCRNFEADQLRLRNYETIR 249

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
            +    E+    +S      F    D   +  +R                    L+    
Sbjct: 250 DLLKDTEDFVNQTS-----VFHPDLDLDPRRSIR------------------DSLKTTKA 286

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            L +LG W A+K  Q +   L    + N   +       L++   +    L+E  +  ++
Sbjct: 287 VLRQLGPWAAWKTTQMWEKELSKLTKTNILPEKALTFLNLARTTMITIKRLLEPEM--RE 344

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
            + +     FV      I E                  I      G  T +        L
Sbjct: 345 VRSLADLQKFVPHRFVRIFE------------------ILEMFQPGFQTER--------L 378

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHN-----NSQEMR 765
           + +  E+  AIIFV++   A  L  +   +    P   F+ S  ++G +     NS    
Sbjct: 379 RKEKPENLSAIIFVDQRYIAYSLHIMIKAIRSWEPKFKFLNSDYVVGASGQNLANSDNQG 438

Query: 766 TFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
             + Q +T+ +F    + +L+ATSV EEG+D++QCNVVI+FD    + +Y+QS+GRARKP
Sbjct: 439 LHKRQTDTLRRFHKSEINVLIATSVLEEGVDVKQCNVVIKFDRPLDMRSYVQSKGRARKP 498

Query: 825 GSDYILMIERGNLS 838
           GS Y++++++ +++
Sbjct: 499 GSTYVVLVDQKDVT 512



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 19/156 (12%)

Query: 904  YCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSCKLQLPCNAPFEK--LEGPVCSSMRLA 960
            YCS+LPSD ++ L P   I+   ++  G T+Y  +L LP N+P +   +      + ++A
Sbjct: 514  YCSKLPSDIFTRLVPHSRIIPVEDR--GVTKYCAELLLPINSPIKHAIILKDAMPNKKIA 571

Query: 961  QQAVCLAACKKLHEMGAFTDMLLPD--KGSGEQQEKV-DQNDEGEP----LPGTARHREF 1013
            Q AV L AC++LH  G   D LLP   +   +  E + D+ DE  P      G+++ ++ 
Sbjct: 572  QMAVALEACRQLHLKGELDDNLLPKGRESIAKLLEHIDDEPDEYAPGMTAKVGSSKRKQL 631

Query: 1014 YPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKC 1049
            Y + +A  L    I   +D C      +++ + ++C
Sbjct: 632  YDKKIARALNESLIEPDKD-C------YIYAFELEC 660



 Score = 45.1 bits (105), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 30/181 (16%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            +YV  I  ++   S FP          + ++ +Y+ +KY +E+  + Q L+     S   
Sbjct: 828  YYVADILTDLRPSSQFPDSN-------FRTFNEYFIKKYHLEIYDQDQSLLDVDFTSNRL 880

Query: 1309 NLLSPRFEH--------------------SEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            NLL PR +                     SE +E +       +    L PEL  +HP+ 
Sbjct: 881  NLLLPRSQPQPRRARSNSASSTTSNPVTPSESRESQASGGHHSSQRQILVPELMDVHPIS 940

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKI---NYPVPASKILEALTAASCQETFCYERA 1405
             +L      LPSI  R+  +LL+ +L++ I    + +  S++  +L  +S      YE  
Sbjct: 941  ATLWNVISALPSIFYRLNQLLLSDELREIILQKAFGIQTSRLQNSLEWSSLAYPTAYEEK 1000

Query: 1406 E 1406
            +
Sbjct: 1001 Q 1001


>gi|371931230|gb|AEX59739.1| dicer [Oryza sativa Indica Group]
 gi|371931234|gb|AEX59741.1| dicer [Oryza sativa Indica Group]
 gi|371931236|gb|AEX59742.1| dicer [Oryza barthii]
 gi|371931238|gb|AEX59743.1| dicer [Oryza nivara]
 gi|371931246|gb|AEX59747.1| dicer [Oryza nivara]
 gi|371931250|gb|AEX59749.1| dicer [Oryza rufipogon]
 gi|371931252|gb|AEX59750.1| dicer [Oryza rufipogon]
 gi|371931254|gb|AEX59751.1| dicer [Oryza rufipogon]
 gi|371931256|gb|AEX59752.1| dicer [Oryza rufipogon]
 gi|371931258|gb|AEX59753.1| dicer [Oryza sativa Japonica Group]
 gi|371931260|gb|AEX59754.1| dicer [Oryza sativa Japonica Group]
 gi|371931262|gb|AEX59755.1| dicer [Oryza sativa Japonica Group]
 gi|371931264|gb|AEX59756.1| dicer [Oryza sativa Japonica Group]
 gi|371931266|gb|AEX59757.1| dicer [Oryza sativa Japonica Group]
 gi|371931270|gb|AEX59759.1| dicer [Oryza sativa Japonica Group]
 gi|371931274|gb|AEX59761.1| dicer [Oryza sativa Japonica Group]
 gi|371931276|gb|AEX59762.1| dicer [Oryza sativa Japonica Group]
          Length = 170

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/169 (60%), Positives = 120/169 (71%), Gaps = 32/169 (18%)

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
            +QNDEGEPLPGTARHREFYPEGVADIL+GEWILSGRDG   S+   L+MY+V CVN G S
Sbjct: 1    EQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTS 60

Query: 1056 KDPFLTQVSDFAVLFSSELDAELAS--------------------------------LKN 1083
            KDPF+TQ+S+FA++F +ELDAE+ S                                LK+
Sbjct: 61   KDPFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKS 120

Query: 1084 FHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLV 1132
            FHVRLMSIVLDVDV+P TTPWDPAKAYLFVPV ++K  DP+ E+DW LV
Sbjct: 121  FHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLV 169


>gi|371931244|gb|AEX59746.1| dicer [Oryza nivara]
          Length = 170

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/169 (60%), Positives = 120/169 (71%), Gaps = 32/169 (18%)

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
            +QNDEGEPLPGTARHREFYPEGVADIL+GEWILSGRDG   S+   L+MY+V CVN G S
Sbjct: 1    EQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTS 60

Query: 1056 KDPFLTQVSDFAVLFSSELDAELAS--------------------------------LKN 1083
            KDPF+TQ+S+FA++F +ELDAE+ S                                LK+
Sbjct: 61   KDPFVTQLSNFAIIFGNELDAEVLSTMMDLFVARTMITKASLVFRGRIEITESQLVLLKS 120

Query: 1084 FHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLV 1132
            FHVRLMSIVLDVDV+P TTPWDPAKAYLFVPV ++K  DP+ E+DW LV
Sbjct: 121  FHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLV 169


>gi|326497771|dbj|BAK05975.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 379

 Score =  211 bits (536), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 189/337 (56%), Gaps = 5/337 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRP--SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
            +E  L+ +F+DR LL EA+TH S    + G + YQRLEFVGDA L    +  L+ +   +
Sbjct: 44   VERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTNPTV 103

Query: 1653 PPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFN 1711
             PG L+ LRAA ++ E  ARVAV+H L+  LR     LD  +  F++ V +EL    G  
Sbjct: 104  GPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQELEDDLGIT 163

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
             +G    KAPKVL DIVE+IA A+++D   +   +W+V + L +P+VT ET+   PV  L
Sbjct: 164  PYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAETIDEQPVSTL 223

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E CQ+  + +++K+ + G    V V++ GV VG   + Q  +A+  A R+AL+ L    
Sbjct: 224  HELCQKHGKDIKFKSWQKGGTTVVNVFVGGVLVGTGSSEQMGIAKLNATRDALSKLHGGG 283

Query: 1832 TAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVR 1891
              +    G  +G   + G     ++ L D C R+ WP P+++  +E GPAH + F Y+V+
Sbjct: 284  NQQVLTTGVGHGLGVEVGELRECKKKLIDQCNRKLWPKPIFKLEKEDGPAHDRTFVYSVQ 343

Query: 1892 VNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            V T    W    +G+ M  VK A++S A  +LE L K
Sbjct: 344  VETQGGIWL--TLGDRMSRVKDAENSGAQKMLEHLLK 378


>gi|326533632|dbj|BAK05347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  211 bits (536), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 189/337 (56%), Gaps = 5/337 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRP--SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
            +E  L+ +F+DR LL EA+TH S    + G + YQRLEFVGDA L    +  L+ +   +
Sbjct: 46   VERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTNPTV 105

Query: 1653 PPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFN 1711
             PG L+ LRAA ++ E  ARVAV+H L+  LR     LD  +  F++ V +EL    G  
Sbjct: 106  GPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIESVKQELEDDLGIT 165

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
             +G    KAPKVL DIVE+IA A+++D   +   +W+V + L +P+VT ET+   PV  L
Sbjct: 166  PYGGSVFKAPKVLADIVEAIAAAVYVDCKFNIEELWKVTRFLFEPIVTAETIDEQPVSTL 225

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E CQ+  + +++K+ + G    V V++ GV VG   + Q  +A+  A R+AL+ L    
Sbjct: 226  HELCQKHGKDIKFKSWQKGGTTVVNVFVGGVLVGTGSSEQMGIAKLNATRDALSKLHGGG 285

Query: 1832 TAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVR 1891
              +    G  +G   + G     ++ L D C R+ WP P+++  +E GPAH + F Y+V+
Sbjct: 286  NQQVLTTGVGHGLGVEVGELRECKKKLIDQCNRKLWPKPIFKLEKEDGPAHDRTFVYSVQ 345

Query: 1892 VNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            V T    W    +G+ M  VK A++S A  +LE L K
Sbjct: 346  VETQGGIWL--TLGDRMSRVKDAENSGAQKMLEHLLK 380


>gi|296812107|ref|XP_002846391.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
 gi|238841647|gb|EEQ31309.1| dicer-like protein 2 [Arthroderma otae CBS 113480]
          Length = 1437

 Score =  210 bits (535), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 209/750 (27%), Positives = 337/750 (44%), Gaps = 105/750 (14%)

Query: 303  QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
            ++R YQ+++LE++ K+N I  ++TG+GKT IA+L IR   ++L+R     +  FL PKVP
Sbjct: 56   KSRAYQVEMLEESLKQNIIVAMDTGSGKTQIAILRIR---HELERCPIHKIVWFLAPKVP 112

Query: 363  LVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
            L  QQ   I +Q   Y      G    + W  Q+ W       +++V T Q+LL+ L + 
Sbjct: 113  LAEQQYLAISKQLPAYQTRILTGADNLERWSTQKIWDAFLLNTRIVVSTPQVLLDALSNG 172

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-----PSVFGMTASPVNLKG 475
             I +  I LL+ DE HH VK  P + +M  FYH    + R     P + G+TASP     
Sbjct: 173  FITLRRIALLVFDEAHHCVKSAPENRIMQNFYHAQVHQLRKTNDLPYILGLTASPT---- 228

Query: 476  VSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
             SS  + A++   LE  L +   T    R+E+ + V +P    V Y K   L      L 
Sbjct: 229  -SSSAEDALR--QLELNLHACCKTPNIHREEMMQFVHIPELRKVSYQKDLML------LN 279

Query: 535  QMEVAVEEAAQSSSRRSK---WQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
             +EV       S   +      ++ G  D  ++E     Y ++   ++     L +    
Sbjct: 280  NLEVKFFAMLNSIDIQDDPFFQRYKGKHDRKSQER----YTLALERKTPCLIQLKRCFSK 335

Query: 592  INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
            I Y   ELG W A                           +Y+S        E+   A  
Sbjct: 336  IVYMFSELGLWAA--------------------------STYIS--------EIYRRAHD 361

Query: 652  KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
            KK AK++D      +          +L    + G  H D       A   V+ KV  LI 
Sbjct: 362  KK-AKLIDQNWSEWDKDDASFICNAMLPVIEIMGERHWDT------APDSVSQKVDHLIH 414

Query: 712  ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN--------SQE 763
             LL  +HT   R IIFVE+   A++L  + ++ P L+ +KS   +G++         ++ 
Sbjct: 415  -LLSSEHTGTSRGIIFVEQRATAVMLTHLISQHPKLTHIKSDYFLGNSAFAARKSDITEL 473

Query: 764  MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
             +   M+++I   + G+  LLVATSV EEG+D+  C++V+ FD  K + +++Q RGRARK
Sbjct: 474  SKPGDMKDSINDLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARK 533

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER-TDLSHLKDTSRLISVDAVPGTV 882
              S Y++        HA    + +   E +     ER ++   L D       D      
Sbjct: 534  ANSKYVIF-------HAEDDTSTKKDWEAMEDIMKERYSNNKELIDEYLAQESDDEDEND 586

Query: 883  YQ---VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
            Y+   +ESTGA+++L++A   +  +CS LP D ++ ++P+FI+    K    T ++ K+ 
Sbjct: 587  YENLRIESTGALLTLDNARQHLSHFCSTLPCD-FTDIQPDFII---SKAVAGTMFTAKVL 642

Query: 940  LPC--NAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            LP   +  F + EG       ++A++     A  +L+E+    + L+P+      +E   
Sbjct: 643  LPTALDPQFREFEGIRTWKKEKMAKRDAAFQAYLQLYEVSLVNEHLMPEHCHTTDEETA- 701

Query: 997  QNDEGEPLPGTARHRE-FYP-EGVADILQG 1024
                 E  P TA   E F P E +AD  Q 
Sbjct: 702  ---HIEKHPSTATCSEAFSPWETIADQWQA 728



 Score =  147 bits (372), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 199/442 (45%), Gaps = 91/442 (20%)

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTAASCQETF 1400
            I  LP    + A  +PS++  V   LLA +L   I  P+    I   L A++A+S +E+ 
Sbjct: 940  ISMLPVGFSKFALFIPSLIHTVGRFLLAEELSKTILSPIGFKDIQLVLTAISASSAREST 999

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             Y+R E LGD+ LK   S  L + +P  HEG L+  +  ++SN  L++  +  GL  +I 
Sbjct: 1000 NYQRLEFLGDSALKLHTSMQLLVDHPFWHEGLLSHKKGFIISNSRLWKATIETGLDRFIL 1059

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F  ++W                   L++   +    ++G +                
Sbjct: 1060 TACFTGAKW-----------------RPLYNSTYTANAGRVGKN---------------- 1086

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WIGIQVESDPEEV 1573
                 S R +S+KTLADVVEALIG   V+GG+D A H ++       W+  +   +    
Sbjct: 1087 -----STREISTKTLADVVEALIGAAIVDGGEDKALHCLQVFLPEINWLSYEKRIEMLYD 1141

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVG 1633
              P      P  +L  +     E  +   F  + LL  +++H S P SG++ YQRLEF+G
Sbjct: 1142 ASPEFHDNAPHDILSKI-----EPLIDYSFTKKALLATSLSHPSNPISGMT-YQRLEFLG 1195

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV------------------ 1675
            D++LD ++T+ LF S   +P   +  +R A VN +  A + +                  
Sbjct: 1196 DSILDSIVTRALFRSNKEIPHQDMHLMRTALVNADYLAFLCMNTSTDEQREDVSASSIGK 1255

Query: 1676 --------KHKLHVHLRHGSSALD------RQIRDF--VKEVLEELLKPG--FNSFGLGD 1717
                    +  L  ++ H S+ALD        +R F  ++E ++E L+ G  +    L  
Sbjct: 1256 VEITSSTRRVSLWQYMSH-SAALDIANAQLATVRKFEELREKIDEALRSGTRYPWTLLLT 1314

Query: 1718 CKAPKVLGDIVESIAGAIFLDS 1739
              APK   DI+ESI GAIF+DS
Sbjct: 1315 LNAPKFFSDIIESILGAIFIDS 1336


>gi|327303976|ref|XP_003236680.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
 gi|326462022|gb|EGD87475.1| dicer-like protein 2 [Trichophyton rubrum CBS 118892]
          Length = 1460

 Score =  209 bits (533), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 195/717 (27%), Positives = 340/717 (47%), Gaps = 105/717 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LE + K+N I  ++TG+GKT IA+L IR   ++L+R +   L  FL PKVPL 
Sbjct: 83  RGYQREMLEASIKQNIIVAMDTGSGKTQIAILRIR---HELERCSNDKLVWFLAPKVPLA 139

Query: 365 YQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
            QQ   I EQ   Y      G    + W  Q+ W       +++V T QILL++L +  I
Sbjct: 140 EQQYRAISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFI 199

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHT-----TSKEKRPSVFGMTASPVNLKGVS 477
            +  I LL+ DE HH VK  P + +M  FYH      +     PS+ G+TASP      S
Sbjct: 200 TLRRIALLVFDEAHHCVKASPENKIMKNFYHARIDQLSETNDLPSILGLTASP-----TS 254

Query: 478 SQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
             ++ +++   LE  LD+   T    R+E+ ++V +P  + V Y K  S+   + ++K +
Sbjct: 255 RLIEDSLR--QLEQNLDAFCKTPAIHREEMMQYVHIPELLKVSYQK-DSIIPHNMKMKYL 311

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            +  +   +S     +++  G  D  + E  R +  ++ +T       L +    +++  
Sbjct: 312 HMLDDIDIESDPFFQRYK--GKTDRKSTE--RFLCALARKTPC--LDQLKRCFTKVSHMY 365

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
           GELG W +                           +Y+S++              +K AK
Sbjct: 366 GELGHWAS--------------------------STYISEIYR---------RTREKRAK 390

Query: 657 VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK---VTPKVQSLIKIL 713
           +VD    + E   ++        S + +  E V  I+G    +     V+PKV+ L+  L
Sbjct: 391 LVD--QNWSEWDRDD-------SSFMCNALEPVVAIMGERCWNSTPDAVSPKVEHLVD-L 440

Query: 714 LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN--------SQEMR 765
           L  + T   R IIFVE+   A++L  + A  P L+ +KS   +G++         ++  +
Sbjct: 441 LSSELTGASRGIIFVEQRATAVMLSHLIAHYPELAHIKSDYFLGNSAFSDRKADITEISK 500

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
              M+++I   + G+  LLVATSV EEG+D+  C++V+ FD  K + +++Q RGRARK  
Sbjct: 501 PGDMKDSIDDLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKS 560

Query: 826 SDYILMIERGNLSHATFLRNARNSEETLR------KEAIERTDLSHLKDTSRLISVDAVP 879
           S +++     +   AT+ ++    E+ ++      KE I+R      +D     S     
Sbjct: 561 SKFVIFYAEDDT--ATY-KDWEAMEDIMKERYLSNKEFIDRLQEEDDEDEIEYES----- 612

Query: 880 GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
              +++ESTGA+++L +A   +  +CS +P + ++  +P+FI+    K G     + K+ 
Sbjct: 613 ---FRIESTGALLTLANARAHLSHFCSTIPCE-FTDTQPDFII---SKSGIKDMLTAKVL 665

Query: 940 LPC--NAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
           LP   +  F + EG       ++A++     A  +L+E+G   D L+P+      +E
Sbjct: 666 LPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYEVGLVNDHLMPEHCRTTDEE 722



 Score =  144 bits (364), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 201/449 (44%), Gaps = 92/449 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTA 1393
            +P     I  LP    + A  +PS++  +   LLA +L   I  P+    I   L A+TA
Sbjct: 956  IPARQSCISMLPVGFAKFALFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQLVLTAITA 1015

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            AS +E   Y+R E LGD+ LK   S  L  ++P  HEG L++ +  +VSN  L++ A+  
Sbjct: 1016 ASAREDINYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDT 1075

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W      P+++                            + Y ++
Sbjct: 1076 GLDQFILTTCFTGAKWR-----PLYN----------------------------STYTNN 1102

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
              + GE      S R LS+KTLADVVE+LIG   ++GG++   H ++         PE  
Sbjct: 1103 AGKIGE-----KSTRELSTKTLADVVESLIGAAIIDGGENKVLHCLELFL------PEIN 1151

Query: 1574 GCPS--RPACVPESVLRSVD------FHALEDALKIKFKDRGLLVEAITHASRPSSGVSC 1625
              PS  R   + +S L   D         +E  ++  F  + LL  +++H S P SG++ 
Sbjct: 1152 WLPSGERIEILYDSALDFNDDCPRDILSKVEPLIEYSFTKKALLAASLSHPSNPISGMT- 1210

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH-------- 1677
            YQRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +          
Sbjct: 1211 YQRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALVNADFLAFLCMNTSTDETRED 1270

Query: 1678 ------------------KLHVHLRHGSS-------ALDRQIRDFVKEVLEELLKPG--F 1710
                               L  ++ H S+       A+ R   +   ++ E  L+ G  +
Sbjct: 1271 VCVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMARTFEELRGQI-ENALRSGARY 1329

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
                L    APK   DI+ESI GAIF+DS
Sbjct: 1330 PWTLLSTLNAPKFFSDIIESILGAIFIDS 1358


>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
          Length = 1741

 Score =  209 bits (532), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 159/505 (31%), Positives = 255/505 (50%), Gaps = 56/505 (11%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            ++P P+ S IL+A T +S  +    ER E +GD++LK+ ++ +L+ KY   HEG+L+ +R
Sbjct: 1233 SHPGPSPSVILQAFTMSSANDGINLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLR 1292

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-VLP------------------V 1477
             + VSNL LYQ    K     + A +F P   W  PG V+P                  V
Sbjct: 1293 SRQVSNLHLYQLGKKKLFGGCMVATKFNPHENWLPPGYVIPDALEEALISSGIPLNYWNV 1352

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDK-----LGTDKNYNEYEDDDMEDGELEGDS----SSYR 1528
             D    +  SS  +Q K++ ++K     L         E+  M+              Y 
Sbjct: 1353 VDLQGMEHMSS--EQVKALVQEKSEQIMLRFGGKIPSVEEVAMDGNIFHAQDLPRFVPYN 1410

Query: 1529 VLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP 1583
            +L+      K++AD VEALIG Y    G   A   M W+G++V     E         + 
Sbjct: 1411 LLTQHSIPDKSIADCVEALIGAYLRACGPRGALLFMSWLGLKVLPVINEGSYGYWTPPIS 1470

Query: 1584 ESVLRSVDFH-----------ALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEF 1631
              V + +D H           + E+ +  KF DR  L++A +HAS   + ++ CYQRLEF
Sbjct: 1471 PLVDQPLDIHVELDRMLAGFESFEEKICYKFNDRSYLLQAFSHASYYLNRLTDCYQRLEF 1530

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDAVLD+LIT++L+ +    PPG LTDLR+A VNN  FA +A +++ H + +H S +L+
Sbjct: 1531 LGDAVLDYLITRYLYENLPRHPPGALTDLRSALVNNTTFAVLAERYEFHRYFKHLSPSLN 1590

Query: 1692 RQIRDFVKEVLE--ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            + +  F+K   E    +   +      D + PKVLGD+ ES+AGAI+LDS    + VW+V
Sbjct: 1591 QIMDKFIKAQEENGHSINEEYYMIEAEDVEVPKVLGDVFESVAGAIYLDSHMSLNAVWRV 1650

Query: 1750 FQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGV 1806
            +  ++   +    + +P  P+REL E    + +  + +    G L  TV+V   G   G+
Sbjct: 1651 YYNMMKKEIDEFSKNVPKSPIRELLELETDRVKFGKAERLPDGRLRVTVDVIGKGTFKGI 1710

Query: 1807 AQNPQKKMAQKLAARNALAVLKEKE 1831
             +N   ++A+  AA+ AL  L++++
Sbjct: 1711 GRN--YRIAKCTAAKYALRTLEKRK 1733



 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 158/317 (49%), Gaps = 26/317 (8%)

Query: 725  IIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHNNSQEMRTFQMQE-----TIAK 775
            +IF ER   A +L  +  +     P L+++     +       ++  + +E      + +
Sbjct: 356  MIFTERRTTAKLLYHLLKDASRCDPQLAYLSPLYTVDRMEGVSVKEMENEERKQEDVMKR 415

Query: 776  FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
            FR     +LVATSV E+G+D+  C++VIR+DL ++  AY+ S+ RAR   + YILM+E  
Sbjct: 416  FRSRDCNILVATSVLEDGIDVPACHLVIRYDLPQSYRAYVHSKARARAKKAHYILMVENE 475

Query: 836  NLSHATF-LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSL 894
             +      L +   +E+ L  ++     ++   + +  + ++ +       E++ +  SL
Sbjct: 476  RMDEFLVDLSHFHATEQILLSKSGYHNSVAEFFNHNEDM-LNCIQAPYPSDETSNSYASL 534

Query: 895  NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK--LEGP 952
             +A+ +I+ YC++LPSD ++ L P +   R +       Y C LQLP N+P  K  L  P
Sbjct: 535  QNAISIINRYCAKLPSDCFTRLTPVW---RIQNVFLDVAYICSLQLPINSPLRKTVLSQP 591

Query: 953  VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-KGSGEQQEKVDQNDEGE--------P 1003
            + S +  A+++  L AC+ LH+     D   P  K +   +E+ D N + E        P
Sbjct: 592  MPSKVT-AKRSAALEACRLLHQKKELDDHFYPTGKENLRLEEEEDYNADLEEENVPENLP 650

Query: 1004 LPGTARHREFYPEGVAD 1020
             PGT + R++Y + VAD
Sbjct: 651  RPGTTKRRQYYYKQVAD 667



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 25/163 (15%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I YE+  +S FP          Y ++  YY+ KYG+++   KQPL+     S   
Sbjct: 858  FYVAEIFYELNPQSKFPDNN-------YPTFEKYYRHKYGIQIQNLKQPLLDVDHTSARL 910

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SE  +    E L +     L PELC IHP   SL R A  LP
Sbjct: 911  NFLTPRYVNRKGVMLPTSSEHTKKTQRESLQQKQ--ILVPELCSIHPFSASLWRQAVCLP 968

Query: 1360 SIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCY 1402
             I+ R+  +LLA QL+ K+     A++I  +L  +  +  FC+
Sbjct: 969  CILYRLNGLLLAEQLRCKV-----ATEI--SLGRSQLEPGFCW 1004



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 395 RWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT 454
           RW  E    QVLVMT  I L ++  + +KM  +NLLILD+CH+ +       V++  Y  
Sbjct: 5   RWTEELGKSQVLVMTYSIFLEVIHKNFLKMNKLNLLILDDCHNVMNNEALKGVLT-LYEN 63

Query: 455 TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPS 514
            +    P + G+TAS VN   +   ++ +  I  LE+KL SV+ T  +     +H   P 
Sbjct: 64  AASSVHPRILGLTASIVN--NICKPMELSQLITILETKLKSVISTSNNVLSALQHSTRPK 121

Query: 515 EVVVE 519
           E++ E
Sbjct: 122 ELICE 126


>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
          Length = 1976

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 175/541 (32%), Positives = 252/541 (46%), Gaps = 96/541 (17%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R
Sbjct: 1433 NHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLR 1492

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV------- 1474
             + VSNL LY+    K L   + A +F P   W  P               GV       
Sbjct: 1493 SKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSALWNQ 1552

Query: 1475 --LPVFDEDTKDGDSSLF-DQEKSVAEDKLGTDKNYNEYEDD-DMEDGELEGDSSSYRVL 1530
              +P          + L  + E+ +   K   DKN +   ++ D     +  +  +   +
Sbjct: 1553 ADIPTLQAVNPTEITQLVRETEEKLVIMKSELDKNESRMSNNLDNLRCFIPYNLITQHSI 1612

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP- 1579
              K++AD VEALIG Y +  G   A   M W+GI V          ES+PEE    S P 
Sbjct: 1613 PDKSIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPAEEVCVMSESEPEERIPGSTPY 1672

Query: 1580 --------------ACV----------------PESVLRSV--DFHALEDALKIKFKDRG 1607
                           C                 PE+ LR +   +  LE ++  KF+D  
Sbjct: 1673 VKGISEQGGATWTQICYGKLEEPQNPLLRYIPDPENELRMMLDGYDELEKSIGYKFRDSS 1732

Query: 1608 LLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VN
Sbjct: 1733 YLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVN 1792

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLGDC 1718
            N  FA +AV+   H + RH S  L   I  FV+        + EE    G        D 
Sbjct: 1793 NTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEECEEAEDV 1852

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQ 1776
            + PK LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+REL E   
Sbjct: 1853 EVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLELEP 1912

Query: 1777 QQAEGLEYKASRSGNLA-------TVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            + A     K  R   LA       TV+V+  G   G+ +N   ++A+  AA+ AL  LK 
Sbjct: 1913 ETA-----KFGRPEKLADGRRVRVTVDVFGKGSFKGIGRN--YRIAKCTAAKCALKKLKS 1965

Query: 1830 K 1830
            K
Sbjct: 1966 K 1966



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 29/343 (8%)

Query: 725  IIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHNNSQ-------EMRTFQMQETI 773
            +IFV++   A +L  + +E+      L F+     I  NN         E+   + +E +
Sbjct: 446  VIFVDKGFTAKILFYLLSEICKHDEDLHFLSPLYTIERNNDDVNYSRDLEIEHRKQEEVL 505

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     LL+ATS+ EEG+DI +CN V+R+D  K   +Y+Q + RAR   + ++L++ 
Sbjct: 506  KRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYVQCKSRARAVDALHVLLVP 565

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +      L   +  E+TL  +   +      ++ + + +   +P            V
Sbjct: 566  QEASKDFIWQLAQYQYIEKTLLLKCSNKELTEEEENEADMYAA-MIPHYKPLNGDDAPKV 624

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
            + NSA+ L++ YC++LPSD ++ L PE+ +E          Y+C L+LP N+P + +   
Sbjct: 625  TFNSAISLVNRYCAKLPSDTFTRLTPEWSIEV-VNIQETIMYTCSLRLPINSPLKYVVTS 683

Query: 953  VCSSMR-LAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-----G 1001
                 R +A++   L  C  LH      D LLP      K   E  E     DE      
Sbjct: 684  YPMPNRAMARRMAALQMCVDLHRENEIDDNLLPIGKENFKAKPEDAEVPALPDESRTDFS 743

Query: 1002 EPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
            E  PGT + R++Y +  A+ L     + G      S L+H+ M
Sbjct: 744  EARPGTTKRRQYYYKKTAEALTDCRPIVG----VPSYLYHINM 782



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP   G+    +YS++ +YY +KYG+++   +Q L+     S   
Sbjct: 953  FYVAEICTNLNPKSSFP---GH----DYSTFEEYYLKKYGIQIQNLEQSLLDVDHTSARL 1005

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 1006 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1063

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1064 CILYRINALLLANQIRCQV 1082



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/310 (22%), Positives = 133/310 (42%), Gaps = 26/310 (8%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ--NKKMLAVFLVPKVP 362
           R YQ+++L  AK+KN I  L   + +T +A+ LI+    + +R   +     ++++    
Sbjct: 17  REYQVELLYAAKEKNIIVCLGKNSEQTFLAIKLIQEFATNNRRSISDGGKRTIYILNDED 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
                A  I++ T   V      + ++F +       F+   VLV TA++   ++  S +
Sbjct: 77  KCTIIATYIKQLTDLKVLACNSNIFKEFAE------HFERSHVLVGTAKVYAQLISESKL 130

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
               INL+I+DECH +++      V+  F    +    P + G+     NL   S ++  
Sbjct: 131 LSCHINLVIVDECHKSIEDSNLKFVLQTFLLCNNV---PRIIGLAVPVFNLTQESGRL-- 185

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
            ++I  +E+     + T  D   + ++ P P E +VEYDK        +    +E  V  
Sbjct: 186 GLEIEKVEAAFQCNLETANDILSVIRYSPKPREYIVEYDKGEK----KDLYNMLESCVLH 241

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
           A +   R  ++  M        E+++++         D      + ++   + L  LG W
Sbjct: 242 AIE-FLRDHRYDPMEIYTEEFYEDIQKI--------PDPIQKPFEMMQDFLHILETLGPW 292

Query: 603 CAYKVAQSFL 612
           CA + A + L
Sbjct: 293 CADRAALALL 302


>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
 gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
          Length = 2179

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 170/538 (31%), Positives = 257/538 (47%), Gaps = 95/538 (17%)

Query: 1380 YPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R 
Sbjct: 1634 HPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRS 1693

Query: 1439 QMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV-------- 1474
            + VSN  LY+    K L   + A +F P   W  P               GV        
Sbjct: 1694 KQVSNFNLYRLGRKKMLGESMVATKFEPHDNWLPPCYYVPRELERALIEAGVPASHWNRA 1753

Query: 1475 -LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS--SYRVLS 1531
             LP     +K+    L  ++     +KLG      +  +  +    LE       Y +++
Sbjct: 1754 DLPSLKNLSKEEICQLVKEKG----EKLGIVNAEKKPINVTIPCLNLENMPCFIPYNLMT 1809

Query: 1532 SKTL-----ADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPE----- 1571
              ++     AD VEALIG Y V  G   A   M W+GI+V          E+DP+     
Sbjct: 1810 QHSIPDKSIADCVEALIGAYLVACGPRGALLFMSWLGIKVLPKEEKFFESENDPDIKKGV 1869

Query: 1572 ------------------EVGCPSRPAC--VP------ESVLRSVDFHALEDALKIKFKD 1605
                              ++  P RP    +P      E +LR  D    E+++K +F+D
Sbjct: 1870 GASRPIKVMTNNGEVTFGKLKSPKRPLICHIPNPEGELEKLLRGFDI--FEESIKYRFRD 1927

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            R  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+    +  PG LTDLR+A 
Sbjct: 1928 RSYLLQALTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRHHSPGALTDLRSAL 1987

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE--------VLEELLKPGFNSFGLG 1716
            VNN  FA +AV+H  H + RH   +L+  +  FV+           E  L          
Sbjct: 1988 VNNTIFASLAVRHDFHKYFRHLCPSLNEVVDRFVRFQQANGHAISEEFYLIEEEECEEAE 2047

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQER 1774
            D + PK LGD+ ES+AGAIFLDSG     VW+V+  ++   +      +P  P+REL E 
Sbjct: 2048 DVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRIMKNEIELFSTNVPKSPIRELFEL 2107

Query: 1775 CQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
              + A+  + +    G     +VEV+  G+  G+ +N   ++A+  AA+ AL  LK K
Sbjct: 2108 EPETAQFGKPEKLADGRRVRVSVEVFGKGIFNGIGRN--YRIAKCTAAKCALKQLKRK 2163



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 151/329 (45%), Gaps = 36/329 (10%)

Query: 724  AIIFVERVVAALVLPKVFAELPS----LSFVKSASLIGH-------NNSQEMRTFQMQET 772
             +IFVE+   A VL  V  +L       SF+     +G            E    + +  
Sbjct: 594  GLIFVEKKFTAKVLFHVLNDLKQADEDFSFLNVQFTVGKVVDGTKDPKGAENEHRKQELM 653

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR     LL+ TS  EEG+++ +CN+VIRFD+ K   +YI ++ RAR   S + L++
Sbjct: 654  LKRFRIRACNLLIGTSFLEEGIELPKCNLVIRFDVPKHYRSYINTKERARAANSLFCLLV 713

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ-----VES 887
              G      F+       ET   EA+      HL+      +   +   + Q     ++ 
Sbjct: 714  --GPNEKDDFVHELAKYYET---EAVLLEKCGHLEPEEEEENEADLYTQLVQPFCPLLKR 768

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF- 946
                V L+SAV L++ YC++LPSD ++ L P     +  K      Y C ++LP N+P  
Sbjct: 769  ECPHVDLSSAVMLLNRYCAKLPSDTFTRLTP-ICNIKTVKEFERKMYVCTIRLPINSPIK 827

Query: 947  EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP---------DKG----SGEQQE 993
            +++EG    +  LA++      C+ LH  G   D L P         ++G    + ++ E
Sbjct: 828  QEIEGCPMPTRVLAKRFAAFQCCQLLHLSGELDDTLQPISKESFWIREEGRLTVTNDETE 887

Query: 994  KVDQNDEGEPLPGTARHREFYPEGVADIL 1022
            ++   D  EP PGT + R++Y + +AD L
Sbjct: 888  EIVSRDSLEPRPGTTKRRQYYYKKIADSL 916



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
             YV  I   +  +S+FP  E       Y ++ +YY +KY + +    Q L+     S   
Sbjct: 1103 LYVAEICTNLNPKSAFPGTE-------YQTFEEYYLKKYNIVIQNLDQALLDVDHTSARL 1155

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE++    E L +     L PELC IHP P +L R A  LP
Sbjct: 1156 NFLTPRYVNRKGVALPTTSEEKKRAKRENLKQKQ--ILIPELCDIHPFPATLWRKAVCLP 1213

Query: 1360 SIMRRVESMLLAIQLK 1375
             I+ R+ ++LLA Q++
Sbjct: 1214 CILHRINALLLADQVR 1229



 Score = 48.1 bits (113), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 308 QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQ 367
            +++L+ +  +N I  L    GKT IA  LI++  N++   N   + +++     +V ++
Sbjct: 20  NVELLDASCVRNIIVCLGNNIGKTFIASKLIQNTSNNISVNNG-TITLYVADSSVVVSRK 78

Query: 368 AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
           A   +  T  +V  Y  +   +     +   + D  Q++V   +    +L + +I M  I
Sbjct: 79  AAYFQRLTNMLVAEY-HKGNCNKIKKIKKIPKLD--QIVVAETETANYMLENELIVMSDI 135

Query: 428 NLLILDECHHAVKKH--PYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIK 485
           NLLIL +CH  +K    P   +M  +Y++++K   P +  + +S  +     SQ+   + 
Sbjct: 136 NLLILHDCHCVLKNGIVPQKELMKFYYNSSTK---PHILSLASSLFSSNLDLSQIKSCLN 192

Query: 486 ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
              +E  L+    T  +   L ++   P EV++EY
Sbjct: 193 --KMEDILNCKAETASNVLSLLRYGTHPHEVLIEY 225


>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
          Length = 1607

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/493 (32%), Positives = 241/493 (48%), Gaps = 86/493 (17%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH--EGQLTRMRQQMVSNL 1444
            ILEALT A   E F  ER+E +GD+ LK V+S +++ +       EG+L+ MR + ++N 
Sbjct: 1158 ILEALTLAKTHEGFDMERSETIGDSILKLVISIYVYGETGSDRCDEGRLSLMRMRQINNK 1217

Query: 1445 VLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
             L++    K +  +  A RF   + +  PG                          K  T
Sbjct: 1218 HLFKLGAKKDIGEFTVAQRFELMANFLPPGF-------------------------KTPT 1252

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
            D            D ++      Y ++  K +AD +EALIGVY    G   A  LM W+G
Sbjct: 1253 DP-----------DTDINAHVQQYVLM--KNVADCMEALIGVYLTTTGIKGAIKLMDWMG 1299

Query: 1564 I------QVESDPEEVGCPSRPACVPESVLRSVDFHALEDAL--------------KIKF 1603
            +      ++ +  E  G P  P+    S L        E+AL              +  F
Sbjct: 1300 LKTVPRLEIATFNEMNGFPILPSTFGSSTLNDTQLKDQEEALSQLFAGLESFEKRLRYTF 1359

Query: 1604 KDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRA 1662
            K++ LL+EA+THAS  P+   +CYQRLEF+GDAVLD+L+T++ + +     P  LTDLR+
Sbjct: 1360 KNKALLIEALTHASYIPNRITNCYQRLEFLGDAVLDYLVTRYYYDNPCQYTPAILTDLRS 1419

Query: 1663 AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE-------------VLEELLKPG 1709
            A VNNE FA +AV+++ H++L+H S +L+  +  FV+              VLEE  +P 
Sbjct: 1420 AMVNNETFAVMAVQNRFHLYLKHLSLSLNVILDRFVRSQEENGHLLMHNYFVLEETSEPH 1479

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP--ETLPMHP 1767
              S    +   PKVLGDI ES+AGAIF+DSG     VW+ + P L   +    E +P+  
Sbjct: 1480 -QSLA-SNIDVPKVLGDIFESVAGAIFVDSGMSLDAVWKSYLPFLHDALEKFNEKIPISA 1537

Query: 1768 VRELQERCQQQAEGLEYKASRS---GNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
            +R L ER       L+++ S S   G L  V + I G +V        K A+  AA+ AL
Sbjct: 1538 LRVLHER---YPNALKFRKSESLADGRLC-VAIEIQGTRVFKGAGGNSKTAKSAAAKYAL 1593

Query: 1825 AVLKEKETAEAKE 1837
            +VL +++  + +E
Sbjct: 1594 SVLNKQDDNQVEE 1606



 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 149/327 (45%), Gaps = 34/327 (10%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS----ICNDLQRQNKKMLAVF 356
           E   R YQ+++ + A  +N I +L TG+GKT IA LLI+     +   L    K+   VF
Sbjct: 30  EFTPRDYQIELFQAALDENIIVYLPTGSGKTFIAALLIKEKSHEVTKPLDSGGKR--TVF 87

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           LVP V L  QQA  +R  T   V  + G MG D W+  RW  EFD+  VLVMTAQI ++I
Sbjct: 88  LVPTVVLAIQQAAYLRRHTYLKVKEFYGSMGVDIWEKDRWNIEFDSNHVLVMTAQIFVDI 147

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
           L H+      +NLL+ DECH AVK  P   V+S+        +RP + G+TA+   ++  
Sbjct: 148 LNHAFFSPHQLNLLVFDECHAAVKDAPMKQVLSKL-KNCEVSQRPKILGLTAALFRMRCK 206

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
             +V   I+   L   +  VV    D + + +    P E +++Y+   S           
Sbjct: 207 PEKVPDLIQ--QLSETMGCVVRIPSDVETVARSSTKPCETILQYEDKNS----------- 253

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE-------RTESDGAANLIQKL 589
                     +   S+  F+    +   ++L Q YG            + D    L   L
Sbjct: 254 -----NPNPDADELSRIIFVMV--SSLMQQLEQQYGEGNSKDGPDVNKQPDKIDVLFDAL 306

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQ 616
             I+Y L  +G + A+  A  ++  L+
Sbjct: 307 NDIDYLLSTIGPYGAFHCAHVYIRILE 333



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 36/255 (14%)

Query: 757 GHNNS-QEMRTFQMQ--ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           G N+S +E +   M+  E +  FR+G   LLVATSV EEG+DI  CN++IRFD  KT   
Sbjct: 408 GRNSSLKETQILNMKQNEIMQYFREGLCNLLVATSVLEEGIDIPDCNLIIRFDRIKTYCD 467

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTS--R 871
           Y+Q++GRAR   + Y +++ RG  + +     A+    ++ ++ +   +    +D +   
Sbjct: 468 YVQTKGRARSKKAFYCILVSRGE-TESCLADLAQF--HSIEQQLLSTGNFEDERDNAIDN 524

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER------- 924
           L S   +P  V   E  G  ++L S++ LI+ YC QL SD    L P+   ++       
Sbjct: 525 LFS-QIIPPYVPFGED-GPRITLPSSISLINRYCGQLSSDPDVSLAPQLTTKKVAESDVD 582

Query: 925 -----------HEKPGGPTEYS-------CKLQLPCNAPF-EKLEGPVCSSMRLAQQAVC 965
                       + P   ++YS       C L LP N+P  +++ G V  + RLA++AV 
Sbjct: 583 PIQLQKIKDILKKLPTDASKYSSINNLFQCHLFLPLNSPLRDEVIGDVMPTKRLAKRAVA 642

Query: 966 LAACKKLHEMGAFTD 980
           L A  KLHE+    D
Sbjct: 643 LKASIKLHELKELDD 657



 Score = 45.1 bits (105), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 19/127 (14%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV+ +  ++T  + FP  E       + +YA Y++ KY + L  ++Q L++       K
Sbjct: 878  FYVDRVS-DLTPLTPFPNNE-------FKTYASYFQLKYKLTLTNQQQQLLQVSREISGK 929

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L  R   + E+             + L  ELC +HPL GS+ +    LP I+ R++ M
Sbjct: 930  NFLVNRVASTREETP-----------MHLVAELCHVHPLAGSIWKQVVWLPCILHRLDRM 978

Query: 1369 LLAIQLK 1375
            L+A +L+
Sbjct: 979  LVAEELR 985


>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
            florea]
          Length = 1362

 Score =  208 bits (530), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/420 (34%), Positives = 222/420 (52%), Gaps = 34/420 (8%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            +++ ALT     + F  ER E LGD+YLK+++S FL+ ++P+  EG LT ++ +++ N  
Sbjct: 936  QVMYALTTKLGNDAFNLERLETLGDSYLKFIISLFLYNQFPKYAEGSLTTIKGKIIGNRN 995

Query: 1446 LYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDE------DTKDGDSSLFDQEKSVAE 1498
            LY   + K +   ++ D F P S + AP    VF +      + K   + L++ + S  E
Sbjct: 996  LYYCGIXKNIPGRMKVDSFVPLSNFIAPAY-TVFRQLQDVLLEAKVSPTVLYEIQISQQE 1054

Query: 1499 DKLG----TDKNYNEYEDDDMEDGELEGDSSSY---RVLSSKTLADVVEALIGVYYVEGG 1551
               G    T KN  + +  + E  E +     Y   + +S K +AD VEALIGVY    G
Sbjct: 1055 QFSGLMTETTKNLIQQKVLNWELAESQTGMEHYLGIQTVSDKAVADCVEALIGVYLRNMG 1114

Query: 1552 KDAANHLMKWIGI---QVESDPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRG 1607
                  L+KW  I   +++S+    G    P      +   + + + +E  L  KFK+RG
Sbjct: 1115 IKDTLTLLKWFQILPNEIDSNTLLFGTSENPIISKGDINSLMPWASEIETKLGYKFKNRG 1174

Query: 1608 LLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             L++A TH S  ++ ++ CYQRLEF+GDA+LD LIT +++ +  NL PG LTDLR+A VN
Sbjct: 1175 YLLQAFTHPSYSANHMTECYQRLEFLGDAILDFLITSYIYENCGNLNPGSLTDLRSALVN 1234

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-----------EVLEELLKPGFNSFGL 1715
            N  FA + V+H LH+ L   S  L+  I  FVK           E+L  LL+    +   
Sbjct: 1235 NITFACLTVRHGLHIALLCYSPKLNDIIERFVKFQEERNHIVNDELLWILLEESECNIA- 1293

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV--TPETLPMHPVRELQE 1773
                 PKVLGDI ESI GAI+LDS ++  VVW++   ++   +    + +P  P+R L E
Sbjct: 1294 EHVDVPKVLGDIFESIIGAIYLDSNKNLMVVWEIIYSIMHKEIDEFSKNIPKQPIRILYE 1353



 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 114/198 (57%), Gaps = 5/198 (2%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPKVP 362
           R YQ+++ E A K+N I +L TGAGKT IAV+LI+ +  D+++   +     VF+V  VP
Sbjct: 11  RTYQIELFEIACKQNVIIYLPTGAGKTFIAVMLIKELSADIRKSYDEGGKHTVFIVNTVP 70

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV QQ+E I   TG       G++G D W    W  +    +VLVMT+QIL++ L H  I
Sbjct: 71  LVMQQSEYITRLTGLSCAALSGDIGIDVWTNTEWNAQLKEHKVLVMTSQILIDALCHGYI 130

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            +  INL+I DECH AV  HP   +M +++   SKE +P V G++A+ +N      ++  
Sbjct: 131 FLNRINLIIFDECHRAVNDHPMRQIM-QYFENYSKEDQPKVLGLSATLLNSNVKLEKIHS 189

Query: 483 AIKICNLESKLDSVVCTI 500
            I+  +LE    + V TI
Sbjct: 190 VIE--SLEITFHAKVVTI 205



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 19/239 (7%)

Query: 705 KVQSLIKILLKYQHT----EDFRAIIFVERVVAALVLPKVFAELPS----LSFVKSASLI 756
           +V++L KIL  + +     ++F  IIFV+R   A +L ++   +        F+    LI
Sbjct: 271 QVRTLFKILKDHYNNKTKDQEFCCIIFVKRRFTAKLLYQILKNISKNNEEYRFLHPEFLI 330

Query: 757 G-----HNNSQEMRTFQM--QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           G     + N +E        +E + +F++G    +VAT + +EG++I +C+++IR+DL  
Sbjct: 331 GFSNDPYRNCKESLCISKWNKEALHRFKNGLSNCIVATDILDEGVNIPKCSLIIRYDLPM 390

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHAT----FLRNARNSEETLRKEAIERTDLSH 865
            V  YIQS+GRAR   S YIL++++GNL   +    F R  +  +E L  +  ER   + 
Sbjct: 391 DVRTYIQSKGRARHVHSQYILLLDKGNLRFISRYNEFKRIEQYLQELLLNKTNERNVPTE 450

Query: 866 LKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
            K  + L      P  V   E     ++  +A+ LI+ YC  L   +++ L P +I+ +
Sbjct: 451 NKIQNELYQHKIQPYVVISNEGQKCCITEQTAIHLINKYCMSLMKSKFACLSPIWILYK 509



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 1151 DVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDREA 1210
            +V +  N  T+     E  F K+ H + F +   P          F+      + P  E 
Sbjct: 595  NVDVKVNHATMILSEEEVRFIKVFHTLIFSEII-PVIKSFMVFDNFNFDNCFLITPVDEK 653

Query: 1211 MQIHNADMPTGKLM-----MADSCANAGDLEGRIVTAAH-SGKRFYVESIRYEMTAESSF 1264
              I+   +   K +     +A     + D E  +V   + + + + V  +  ++T  S F
Sbjct: 654  WNINWQVIKHYKCIEYISPIAPFDFKSTDYELTLVKPNYRAAETYIVTQVCDDITPNSCF 713

Query: 1265 PRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGE 1324
            P          + SYA YYK+K+G+ +   KQP++  + +S   N + PR   SE +   
Sbjct: 714  PTDN-------FLSYAHYYKEKHGLTIKNLKQPMLEVKAISRTINYILPRHMQSESKNRR 766

Query: 1325 GEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
              + L K     L PELC     P      A  LPSI+ R+  +L+A  L+  I
Sbjct: 767  YVD-LPKNMKEHLVPELCTKINFPALYWLKATILPSILHRISQLLVAEDLRYTI 819


>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
            distachyon]
          Length = 360

 Score =  208 bits (529), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 188/327 (57%), Gaps = 6/327 (1%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L+ +F DR LL  A+TH S  S G + YQRLEF+GDA LD   +  L+ +   L P
Sbjct: 26   VERLLQYRFHDRALLELALTHQSF-SGGAASYQRLEFLGDAALDLAFSDFLYRANPTLGP 84

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT LRAA ++ E  ARVAV+H L+  LR     LD  +  F+ E++++ L+  F++  
Sbjct: 85   GELTTLRAANISTEKLARVAVRHDLYPLLRRACPPLDLLVGQFI-ELVKQELEDDFSTAP 143

Query: 1715 LGDC--KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
             G C  KAPKVL DIVE+IA A+++D   D    W+V + L +P++T ET+   P+  L 
Sbjct: 144  YGGCVVKAPKVLADIVEAIAAAVYMDCKSDIEKFWKVTRRLFEPLITVETMHEQPMSMLN 203

Query: 1773 ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
            E CQ+     ++K S+ G +  +++++ G  VG+  + Q+ +A+  A+R+A++ L     
Sbjct: 204  ELCQKHGMVPQFKESKKGEMTVIKIFVGGALVGMGSSEQRAIAKLNASRDAVSKLLGDPK 263

Query: 1833 AEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRV 1892
             +    G   G   +       +Q LN+ C +++WP P+++  +E GPAH ++F Y+V V
Sbjct: 264  QQVLTTGVGPGLVVEVEDLRECKQKLNEQCSKKHWPKPIFKLEKEDGPAHDRKFMYSVEV 323

Query: 1893 NTTDKGWTDECVGEPMPSVKKAKDSAA 1919
             T +  +     G+PM  VK A++S  
Sbjct: 324  ETQNGTYFAR--GDPMSRVKYAENSGG 348


>gi|371931226|gb|AEX59737.1| dicer [Oryza sativa Indica Group]
 gi|371931228|gb|AEX59738.1| dicer [Oryza sativa Indica Group]
 gi|371931232|gb|AEX59740.1| dicer [Oryza sativa Indica Group]
 gi|371931240|gb|AEX59744.1| dicer [Oryza nivara]
 gi|371931242|gb|AEX59745.1| dicer [Oryza nivara]
 gi|371931268|gb|AEX59758.1| dicer [Oryza sativa Japonica Group]
 gi|371931272|gb|AEX59760.1| dicer [Oryza sativa Japonica Group]
          Length = 170

 Score =  208 bits (529), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 119/169 (70%), Gaps = 32/169 (18%)

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
            +QNDEGEPLPGTARHREFYPEGVADIL+GEWILSGRDG   S+   L+MY+V CVN G S
Sbjct: 1    EQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTS 60

Query: 1056 KDPFLTQVSDFAVLFSSELDAELAS--------------------------------LKN 1083
            KD F+TQ+S+FA++F +ELDAE+ S                                LK+
Sbjct: 61   KDSFVTQLSNFAIIFGNELDAEVLSTTMDLFVARTMITKASLVFRGRIEITESQLVLLKS 120

Query: 1084 FHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLV 1132
            FHVRLMSIVLDVDV+P TTPWDPAKAYLFVPV ++K  DP+ E+DW LV
Sbjct: 121  FHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLV 169


>gi|371931248|gb|AEX59748.1| dicer [Oryza rufipogon]
          Length = 170

 Score =  208 bits (529), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 119/169 (70%), Gaps = 32/169 (18%)

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
            +QNDEGEPLPGTARHREFYPEGVADIL+GEWILSGRDG   S+   L+MY+V CVN G S
Sbjct: 1    EQNDEGEPLPGTARHREFYPEGVADILRGEWILSGRDGYQNSQFIKLYMYSVNCVNVGTS 60

Query: 1056 KDPFLTQVSDFAVLFSSELDAELAS--------------------------------LKN 1083
            KD F+TQ+S+FA++F +ELDAE+ S                                LK+
Sbjct: 61   KDSFVTQLSNFAIIFGNELDAEVLSMTMDLFVARTMITKASLVFRGRIEITESQLVLLKS 120

Query: 1084 FHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVDPMNELDWDLV 1132
            FHVRLMSIVLDVDV+P TTPWDPAKAYLFVPV ++K  DP+ E+DW LV
Sbjct: 121  FHVRLMSIVLDVDVDPSTTPWDPAKAYLFVPVGAEKCTDPLREIDWTLV 169


>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
          Length = 1479

 Score =  208 bits (529), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 224/443 (50%), Gaps = 38/443 (8%)

Query: 1374 LKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQL 1433
            L +K +Y    ++IL+ALT   C + F  ER E LGD+YLK++ S FL+  +P   EGQL
Sbjct: 1041 LAEKHSYGPGPTEILQALTTKMCHDMFNLERLETLGDSYLKFITSLFLYHTFPMLSEGQL 1100

Query: 1434 TRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG--VLPVFDEDTKDGDSS-- 1488
            T ++ +++ N  LY   ++KG+   ++ D FAP S +  P   V     +   D D S  
Sbjct: 1101 TAIKGRIIGNRNLYYNGVNKGIPGRLKIDEFAPMSTFIVPAYTVFRPLQKTLLDQDVSSN 1160

Query: 1489 -LFD----QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY---RVLSSKTLADVVE 1540
             L++     E+ +  D   +  N  +         E++     Y   +++S K ++D +E
Sbjct: 1161 ILYELPVPDEERLTGDISASTSNTIQNTISQWSLAEIQTGMEHYLNIQIISDKAISDSIE 1220

Query: 1541 ALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV--GCPSRPACV----PESVLRSVDFHA 1594
            ALIGVY    G   A  L+KW GI  +   +E+  G  S    +    P   +   D  +
Sbjct: 1221 ALIGVYLRNTGISGAAKLLKWFGILPDIKIDELLNGTNSSNPIIGIGNPNEHMPWAD--S 1278

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            +E  L  KF +R  L++A TH S   + ++ CYQRLEF+GDAVLD LIT H++    NL 
Sbjct: 1279 IEKRLGYKFNNRAYLLQAFTHPSYSVNRITDCYQRLEFLGDAVLDFLITCHIYEFCGNLS 1338

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN-- 1711
            PG LTDLR+A VNN  FA +AV++ LH  L   +  L   I  FVK   +E      N  
Sbjct: 1339 PGALTDLRSALVNNITFACLAVRYGLHTCLLAYAPQLHEMINRFVK--FQEDRNYAINDE 1396

Query: 1712 ----SFGLGDCK------APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT-- 1759
                     DC        PKVLGD+ E++ GAI+LDS R+ + VW++    +   +   
Sbjct: 1397 LLWVLLEEEDCNIAEYIDVPKVLGDLFETLIGAIYLDSNRNLAKVWEMVYSFMHKEIDEF 1456

Query: 1760 PETLPMHPVRELQERCQQQAEGL 1782
               +P +PVR + E     A+ L
Sbjct: 1457 SRNVPKNPVRVIYEHQDAHAKFL 1479



 Score =  152 bits (384), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 5/227 (2%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLV 358
           E   R YQ+D+ E+A + N I +L TGAGKT IAV+L++    ++Q    K    ++F+V
Sbjct: 7   EFTPRAYQIDLYEKAVENNIIVYLPTGAGKTYIAVMLLKKFSGEIQMSYSKNGKRSIFIV 66

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V LV QQ + IR  T      Y G+M  D W   +W  E D  QVLVMTAQI ++ + 
Sbjct: 67  NTVALVRQQTDYIRRHTCLTCKGYSGDMKVDCWKEDQWILELDANQVLVMTAQIFVDTIT 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
           H  IK++ INL++ DECH AV  HP   +M + +    K+++P +  M+A+ +N    S 
Sbjct: 127 HGYIKLDRINLIMFDECHRAVNNHPMRQIM-QLFEKYCKKQQPRILAMSATLLNANIKSD 185

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAAS 525
           +++  IK  +LE    + V T+K    ++++   P E +++YD   +
Sbjct: 186 KIESTIK--DLEVTFQAKVATVKSTDCIQEYCTNPKENIIKYDTYVA 230



 Score = 77.0 bits (188), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 720 EDFRAIIFVERVVAALVLPKVFAELP----SLSFVKSASLIGHNNSQEMRTFQM------ 769
           + F  IIFV+      VL  +   L        F+    ++G +NS    T ++      
Sbjct: 412 QKFCCIIFVKERFMTQVLYHILKTLSMHDDQYHFLLPDFIVGCHNSPYKNTREVLCLAKW 471

Query: 770 -QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
            +E + +FR G    +VAT V +EG+D+  C +V+R+DL     AY+QS+GRAR   S Y
Sbjct: 472 QKEVMQRFRKGLSNCIVATDVVDEGIDVPLCALVVRYDLPTDYRAYVQSKGRARHGTSHY 531

Query: 829 ILMIERGNLSHATFLRNARNSEETLRKEAI--ERTDLSHLKDTSR-LISVDAVPGTVYQV 885
            +++ R + +  +  ++ + +E  ++   I  E   L   K+    L   + +P   Y V
Sbjct: 532 TVLVPRDDETFLSRYKDFKITELKMKTILIGNEVRSLPTDKEIENGLYQHEILP---YTV 588

Query: 886 ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
            + G V++ N+ V +++ YC+ L   ++  L P + + +
Sbjct: 589 SAAGIVLTENNVVSILNRYCNSLLRCKFVTLIPVWTLYK 627



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%)

Query: 1214 HNADMPTGKLMMADSCANAGDLEGRIVTAAH--SGKRFYVESIRYEMTAESSFPRKEGYL 1271
            H   +P+  L    S     D E  +V  ++  S   + V  +  ++T  S FP  +   
Sbjct: 777  HVEKVPSSTL----SHVRYSDYEVTLVNPSYRTSPSVYIVTQVCDDLTPTSLFPTDD--- 829

Query: 1272 GPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDK 1331
                + +Y  YY++K+G+++   KQPL+  + +S   N + PR       +    ++L+ 
Sbjct: 830  ----FETYTHYYEEKHGIKIQNLKQPLLEVKAISTKINCIKPRSMKPGLSKRRRADVLED 885

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
             +   L PELC +   P      A  LPSI+ R+  +L+A  L++ I
Sbjct: 886  -FEEHLIPELCRMICFPALYWLKASTLPSILHRITHLLIAEDLRETI 931


>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
          Length = 1816

 Score =  207 bits (528), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 260/559 (46%), Gaps = 119/559 (21%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL++LT ++  + F  ER E+LGD++LK  V+ +L+  YP   EG+L+ +R + VSN  L
Sbjct: 1259 ILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSNFNL 1318

Query: 1447 YQYALSKGLQSYIQADRFAPS-RWAAPGVL------PVFDEDTK-DGDSSLF--DQEKSV 1496
            Y     K L   +Q   F PS  W  P +L      P+  E+T+ D D+       + S 
Sbjct: 1319 YCLGEKKALAHKMQVSLFDPSINWLPPCMLVKESSKPIPKEETETDPDAGFVIDTWDPST 1378

Query: 1497 AEDKLGT-----------DKNYNEYEDDDMEDGELE--------------------GDSS 1525
             E                ++N +++ D+++++ + E                    GD  
Sbjct: 1379 VEGVDDFDDDDFDSDQCWEENSDDFSDEEIDETKAECPDDFFAREEKDKEQWSFSVGDPD 1438

Query: 1526 ---------------------SYRVLSSKTLAD-----VVEALIGVYYVEGGKDAANHLM 1559
                                  Y + +  +++D      VEALIG Y V  G  +A  +M
Sbjct: 1439 DVPGLTYTGAKTQDLGSVPQLPYEIHTQHSMSDKSIADCVEALIGCYLVSCGFRSALLIM 1498

Query: 1560 KWIGIQV--------------ESDPEEVGCPSRPACV------PES-VLRSVD------- 1591
             W+G+ V               SD      P   +C+      PES +LRSV        
Sbjct: 1499 AWMGLDVLPAINDQSKKRNDQSSDLPAADLPV--SCLYGYLKQPESPLLRSVPNAEDVLQ 1556

Query: 1592 -----FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
                 +   E  +  +FKDR  L++A TH+S   + ++ CYQRLEF+GDA+LD+LIT+HL
Sbjct: 1557 QQLVGYDGFEKTINYRFKDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITRHL 1616

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            +  +TNL PG LTDLR+A VNN  FA +AVK   H + +  ++ + + I +FV  V  + 
Sbjct: 1617 YDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFVDAKN 1676

Query: 1706 LKPGFNSF-----------GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
               G +S               D + PK LGDI ES+AGAI+LDSG   + VW+V+ P++
Sbjct: 1677 EALGMDSQLKYSEMDGEQEESEDIEVPKALGDIFESVAGAIYLDSGMSLNAVWKVYYPMM 1736

Query: 1755 DPMVT--PETLPMHPVRELQERCQQQAE-GLEYKASRSGNLATVEVYIDGVQVGVAQNPQ 1811
               +      LP+ PVREL E   + A  G   K        TV V   G   G+ +N  
Sbjct: 1737 KQQIEQYASDLPISPVRELLEMEPETARFGPPEKTIDGKTRVTVNVVGKGQFKGIGRN-- 1794

Query: 1812 KKMAQKLAARNALAVLKEK 1830
              +A+  AAR AL  LK +
Sbjct: 1795 YHIAKATAARFALRHLKSQ 1813



 Score =  173 bits (438), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 189/733 (25%), Positives = 319/733 (43%), Gaps = 162/733 (22%)

Query: 719  TEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLI---GHNNSQEMRTFQMQ- 770
            T +   IIFVE+   A+V+ ++F +L    P+L F+  + +    G   + +    Q+Q 
Sbjct: 473  TTNLCGIIFVEQRYTAVVMSRLFKKLSKRDPNLHFLLCSCIAIGSGRLGTTKKSAIQVQN 532

Query: 771  ------ETIAKFRDGRVTLLVATSVAEEGLDIRQCN---VVIRFDLAKTVLAYIQSRGRA 821
                  E + KFR   V +LVATS  E+G+++ +CN   +V+RFD   +  +Y+QS+ +A
Sbjct: 533  QRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPASYQSYMQSKAKA 592

Query: 822  RKPGSDYILMIERGNLSHATFLRNARNSEE---TLRKEAIERTDLSHLKDTSRLISVDA- 877
            R P S Y+++I   ++    FL + +  +E    L +++  +T     ++   L+  D  
Sbjct: 593  RAPTSHYLMLIYEPDVQ--LFLSDVQCYQEFERVLNRKSKGKTQPQ--EEVLDLLKADKQ 648

Query: 878  VPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK 937
            +P  + + E      S+ +A+ +I+ YC++LPSD ++ L     M+  +    P E+   
Sbjct: 649  MPAYIPKNEEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMQERKGDVSP-EFQAT 707

Query: 938  LQLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            LQLP N+P  K + GP     + A  AV + A   LH+ G   D L P     E   K  
Sbjct: 708  LQLPINSPLRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQP--MGKESILKAT 765

Query: 997  QN------DEGEPLPGTARHREFYPEGVADILQG-------EWILSGRDGCTGSKL---- 1039
             N       +G+  PGT + R +Y + VA  LQG          L   D    S L    
Sbjct: 766  DNAFNHLFADGQTRPGTTKKRRYYDKEVAKCLQGCLPQADQPCYLYSVDMSLASPLPDIL 825

Query: 1040 ------FHLFMYTVKCVNNGISKD-------PFLTQVSDFAVLFSSELD------AELAS 1080
                   H    T +C     SK        P  T+  + AV  + E +      A++  
Sbjct: 826  NIRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSITLESNEIRLSGAQIRR 885

Query: 1081 LKNFHVRLMSIVLDVDVEPYTTPWDPAKA---YLFVPVVSDKSVDPM---NELDWDLVEK 1134
             ++FH  + S VL +D +P     +P K+   YL VP+    +  P    + +DW  +EK
Sbjct: 886  AQSFHGCMFSEVLRLD-KP-NLELNPEKSQANYLIVPLKEGPARGPSGGPSVIDWSFLEK 943

Query: 1135 ITKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIA 1194
            ++                                        ++ G    PT     + +
Sbjct: 944  VS----------------------------------------LSSGHLDQPTQLPDYSQS 963

Query: 1195 QFDVVKASGLVPDREAMQIH-NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVES 1253
            QF+   ++ ++ D     I+ N D P  +  MAD                          
Sbjct: 964  QFEF--STDILADAVVTPIYRNIDQPQ-RYFMAD-------------------------- 994

Query: 1254 IRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSP 1313
            I Y++   S FP +       +Y ++ DYY ++Y +++   +QPL+    +S   NLL+P
Sbjct: 995  ILYDLPVTSPFPSE-------KYETFVDYYFERYDIQISNFQQPLVDVDCMSSRLNLLTP 1047

Query: 1314 RFEH--------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRV 1365
            R+ +        S  Q  +G   L K  Y  L PELC+I+P+P SL R A  LPSI+ R+
Sbjct: 1048 RYLNHKGKALPISTGQNKKGN--LQKKQY--LVPELCYIYPIPASLWRKAVCLPSILYRL 1103

Query: 1366 ESMLLAIQLKDKI 1378
             ++L+A +L+ ++
Sbjct: 1104 NALLIAEELRVQV 1116



 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 6/217 (2%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKKMLAVFLVPKVP 362
           R YQL++LE A ++NT   L++G  KT +AV+LI+ +     L+ ++     +FLV    
Sbjct: 39  RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            + +   VI   T   V  Y        WD  RWQ E +   V VM ++I L +L+ S +
Sbjct: 99  YLSEYGNVIHTHTDLNVKEYRNREKMISWDKTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158

Query: 423 KMEAINLLILDECHHAVKK-HPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
            +   NLLILDECHH ++  HPY  +M  F +   ++ RP + G+T S   LKG      
Sbjct: 159 GLSMFNLLILDECHHTLQHLHPYHQIMLAF-NQCPRDDRPRILGLTES--ILKGDFKPCA 215

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV 518
               I  LE+ L S      +   + K+   P E V+
Sbjct: 216 LEKHIDMLETSLQSTAKIATNLTSISKYGTKPKEAVI 252



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 6/80 (7%)

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            ++++++T  S  S G +  +RLE +GD+ L   +T +L+ +Y +L  G+L+ LR+  V+N
Sbjct: 1258 IILQSLT-MSNSSDGFN-LERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1315

Query: 1668 ENF----ARVAVKHKLHVHL 1683
             N      + A+ HK+ V L
Sbjct: 1316 FNLYCLGEKKALAHKMQVSL 1335


>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
          Length = 1488

 Score =  207 bits (527), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/467 (32%), Positives = 233/467 (49%), Gaps = 49/467 (10%)

Query: 1375 KDKINYPVPASKILE--------------ALTAASCQETFCYERAELLGDAYLKWVVSRF 1420
            +D+ N PVP   IL               ALT     + F  ER E LGD+YLK++ S F
Sbjct: 986  QDQNNIPVPVLHILSLKCSYGPDPGQIVYALTKTG-HDAFNLERLETLGDSYLKFITSLF 1044

Query: 1421 LFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFD 1479
            L+ ++P+  EG LT ++ +++ N  LY   + K +   ++ D F P S + AP    V+ 
Sbjct: 1045 LYNEFPKHSEGYLTALKGKIIGNRNLYYCGIKKNIPGCMKVDSFIPLSNFIAPA-YTVYR 1103

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGT----DKNYNEYEDDDMEDGELEGDSSSY-- 1527
            +        K   + L++ E    E   G      KN  + +  D E  E +     Y  
Sbjct: 1104 QVQDVLLYAKVSPNVLYEIEIPRDEQLCGNISEATKNAIQAKILDWEAAEAQTGMEHYLG 1163

Query: 1528 -RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI---QVESDPEEVGCPSRPACVP 1583
             + +S KT+AD VEALIGVY    G      L++W  I   +++++    G P  P    
Sbjct: 1164 IQTVSDKTVADCVEALIGVYLRSMGIKDTLILLQWFQILPHKIDANELLFGTPQNPIISE 1223

Query: 1584 ESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLI 1641
             +V   + + + +E  L  +F +RG L++A TH S  P++   CYQRLEF+GDA+LD LI
Sbjct: 1224 GNVNHLMPWASNIETKLGYQFNNRGYLLQAFTHPSYTPNNMTECYQRLEFLGDAILDFLI 1283

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-- 1699
            T +++ S  NL PG LTDLR+A VNN  FA + V+H LH+ L   +  L+  I  FVK  
Sbjct: 1284 TNYIYESCGNLNPGALTDLRSALVNNITFACLTVRHGLHIALLSYAPKLNNVIERFVKFQ 1343

Query: 1700 ---------EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                     E+L  LL+    +        PKVLGDI ES+ GAI+LDS ++ SVVW + 
Sbjct: 1344 EERNYAVNDELLWILLEEDECNMA-EHVDVPKVLGDIFESVIGAIYLDSNKNLSVVWNIV 1402

Query: 1751 QPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV 1795
              ++   +    + +P  P+R L E    + + L+     + N+  V
Sbjct: 1403 YSIMHKEIDEFSKNIPKQPIRVLYETHGARPQFLKATVIENTNIVMV 1449



 Score =  149 bits (375), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 11/233 (4%)

Query: 292 KSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK 351
           +++ +E +P    RPYQ+D+ E A K+N I +L TGAGKT IAV+LI+ +  D++R   +
Sbjct: 2   ETDIREFIP----RPYQIDLFEIACKENVIIYLPTGAGKTFIAVMLIKELSADIRRPYAE 57

Query: 352 --MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMT 409
                +F+V  VPLV QQ++ I+  TG   G    E G DFW  + W    +  +VLVMT
Sbjct: 58  GGKHTIFIVNTVPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNNHEVLVMT 117

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
           +QIL+N L H  + +  INL+I DECH AV  HP   +M + +    KE++P V G++AS
Sbjct: 118 SQILVNALCHGYMFLNRINLIIFDECHRAVNDHPMRQIM-QLFENCPKEEQPRVLGLSAS 176

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
            +N      +V   ++   +         T+ D+     +   P E ++++D+
Sbjct: 177 LLNANVRLEKVQSVMQSLEVTFNARIATATVADK----SYYASPIEEIIQFDQ 225



 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 123/239 (51%), Gaps = 19/239 (7%)

Query: 705 KVQSLIKILLKY---QHTED-FRAIIFVERVVAALVLPKVFAELP----SLSFVKSASLI 756
           ++Q L K+L  +   +H++  F  IIFV+R   A +L ++   +        F+    +I
Sbjct: 353 QIQKLFKVLKDFYNNKHSDQVFCCIIFVQRRFTAKILYQILKSVSIYDEECKFLHPEFVI 412

Query: 757 G-----HNNSQEMRTF--QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           G       NS+E+     + +E + +FR+G +  +VAT V +EG+D+ +C+++IR+DL  
Sbjct: 413 GVSSNPFRNSKELLCVSERNKEVLLRFRNGSLNCIVATDVIDEGIDVPKCSLIIRYDLPM 472

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD- 868
            V  YIQS+GRAR   S Y+++++  +  +       +  E+ L++  +++TD  +L   
Sbjct: 473 DVRTYIQSKGRARHAYSRYVVLLQSDDSQYLRRHNEYKKIEQHLKQLLVDKTDERNLPTE 532

Query: 869 ---TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
               S L   D  P  V   +     ++   A+ +I+ YC+ L   +++ L P + + +
Sbjct: 533 NEIQSELYQHDIEPYQVISDDGQICCITEQMAISIINQYCTSLLKSKFACLSPIWTLRK 591



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 20/148 (13%)

Query: 1229 CANAGDLEGRIVTAAH-SGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY 1287
            C  + D E  +V   + +   + V  +  ++T  S FP          +S+Y  YYK+K+
Sbjct: 756  CFKSSDYELALVKPNYRAADTYIVTQVCDDITPSSCFPTDH-------FSTYIHYYKEKH 808

Query: 1288 GVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
             +E+   +QP++  + +S   + + PR + +E ++              L PELC     
Sbjct: 809  RLEINNLEQPMLEVKSISRAIDYIMPRDKSTESKKEH------------LVPELCIRINF 856

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLK 1375
            P      A  LPSI+ RV  +L+A  L+
Sbjct: 857  PALYWLKATTLPSILHRVSQLLIAEDLR 884


>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1489

 Score =  207 bits (527), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 218/753 (28%), Positives = 327/753 (43%), Gaps = 136/753 (18%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL--IRSICNDLQRQNKKMLAVFLVPK 360
           Q R YQ ++L+ + K N I   +TG+GKT IA+L   I + C      NK  ++ FL P 
Sbjct: 18  QTRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAECE----PNK--VSWFLAPT 71

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRH 419
           V L  QQA+VI+      VG   G      W ++  W+      ++LV T Q+LL+ LRH
Sbjct: 72  VALCQQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRHRILVTTPQVLLDALRH 131

Query: 420 SIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHTTS------------------KEKR 460
             I +   I LLI DE HHA   HPY+ +M EFY                      + +R
Sbjct: 132 GYINLGRDIGLLIFDEAHHATDNHPYNCIMKEFYFKLPVRQSDLDDAISRGVQRKFRNER 191

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVE 519
           P V G+TASP+           A ++  LES LD ++    ++R+EL K V  P    V 
Sbjct: 192 PMVLGLTASPI----FGGDPQHAFRV--LESNLDGIIRSPQQNRQELAKFVHRPIFRHVL 245

Query: 520 YDKAAS--------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY 571
           Y+  AS        L  L++ +  M +  EE    SS R +     A+ A   E +R   
Sbjct: 246 YNAPASDIQFMSCNLMGLNQVISGMNI--EEDPYISSLREQL----AKSAPGPERIRIDQ 299

Query: 572 GVSERTESD------GAANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQ 624
            +S+  +S       G  +L    + I Y   ++G W A + +A+    AL N       
Sbjct: 300 KLSKTLQSKSSYTHKGLRDLATTAQDICY---DVGPWAADWYIAKVIEKALDN------- 349

Query: 625 LDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDS--HV 682
                 E+    ++S+ Q                D E  +            LLD    V
Sbjct: 350 ------ETPFDNIISVWQ----------------DKEKRY------------LLDHLRQV 375

Query: 683 VSGGEHVDVIIGAAVADGKVTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAALVLPKVF 741
           V      D     A A  KV   VQSL+ +      H E +  I+FV R    L L +V 
Sbjct: 376 VVMPTSYDAEDVTADASEKVKVLVQSLLDEKAWAESHNEPYSGIVFVTRRDVVLALTEVL 435

Query: 742 AELPSLS-FVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVA 790
           A  P  S   +   L+G ++S   R+F              T+  FR G + L++AT+VA
Sbjct: 436 AHHPETSQRFRVGCLLGSSDSAYRRSFLDITRTLLKQSQANTLLDFRSGDINLIIATAVA 495

Query: 791 EEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE 850
           EEGLDI+ C  VIR+D    + ++ QSRGRAR+  S ++LM + G+      ++  +  +
Sbjct: 496 EEGLDIQACGNVIRWDAPNNMASWAQSRGRARRERSSFVLMFQAGSDDKQQVMKWEQLEK 555

Query: 851 ETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS 910
           + +   + ++ D  +  D +   ++D      +QVESTGA++SL SAV  ++ +CS LP+
Sbjct: 556 QMMDLYSNDQRDTGNTHDENDESTLDDHGDLEFQVESTGALLSLQSAVSHLNHFCSILPN 615

Query: 911 DRYSILRPEFIMERHEKPGG-------------PTEYSCKLQLPCNAPFE------KLEG 951
                  P + ++  + P G             P  + C + LP   P E      K E 
Sbjct: 616 SYRVSHLPIYDIDPPDMPEGWHSFEHKSNVPPYPGPFGCTVTLPRLLPSELRVFSVKREY 675

Query: 952 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           P   S + A Q V   A   L+      D LLP
Sbjct: 676 P---SKQSAIQHVAFNAYLALYNAKLLNDNLLP 705



 Score =  178 bits (452), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 166/546 (30%), Positives = 241/546 (44%), Gaps = 98/546 (17%)

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI-----LE 1389
            V L P    +  L  +    AQ LPSI+R +  M   I L+D +    P SKI       
Sbjct: 963  VLLLPRYTRVVLLSPAETEYAQILPSIIRHLSVMTTVISLRDTLFTGTPLSKIPLPLLTT 1022

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALTA   Q    YER E LGD  LK++VS  L   +P  HEG LTR +   VSN  L + 
Sbjct: 1023 ALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGVSNAQLAKN 1082

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ K L  +I  DRF P +W      P                                +
Sbjct: 1083 AVLKKLYRWIIRDRFTPRKWTPRYCTP-------------------------------PQ 1111

Query: 1510 YEDDDMEDGELEG-DSSSYRV----LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
             ED   E+ E+EG DS   R     LS+K LADVVE+LIG  Y  GG D      K+ G+
Sbjct: 1112 NEDQIKEEVEVEGSDSRKSRAVIEELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGL 1171

Query: 1565 QVESDPEEVGCPSRPACVPESVLRSV----DFHA----LEDALKIKFKDRGLLVEAITHA 1616
             +E             CV E+ L  V    DF A    +E  L   F  + LL+EA+THA
Sbjct: 1172 GLE-------WWGLAKCV-ETALSVVETTDDFPAQVTDVELMLGYNFTRKLLLIEALTHA 1223

Query: 1617 SRP-SSGVSCYQRLEFVGDAVLDHLITKHLF-FSYTNLPPGRLTDLRAAAVNNENFARVA 1674
            S    +    Y+R+EF+GD++LD +IT +L+        PG +   +++ VN    A + 
Sbjct: 1224 SHQFDTRTVSYERMEFLGDSILDMIITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFIC 1283

Query: 1675 VKHKLHVH--------------------------LRHGS-SALDRQIRDF-----VKEVL 1702
            +++ L V                           L H S + L+ Q   F     VK  +
Sbjct: 1284 LRNSLKVDTSMPGPNHEGRITLNTQSQEIYLWQCLLHSSHTILEDQKTTFSRYNKVKAQI 1343

Query: 1703 EELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLD 1755
            E+ L+    F    L   +APK   D++ES+ GA +LDSG + +VV ++ +     P L+
Sbjct: 1344 EDALQNDSIFPWAALTKLQAPKFFSDMIESLIGAAYLDSGGNINVVREILRKLGILPTLE 1403

Query: 1756 PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMA 1815
             +V  +   +HPV  +    Q++ + +EY  +  G   T  + IDG +   A N ++  A
Sbjct: 1404 RIVRDDVDVLHPVSRVSLWTQREYKTIEYIFNEEGGGVTCSILIDGKEAVRAHNERRGHA 1463

Query: 1816 QKLAAR 1821
             +  A+
Sbjct: 1464 GQEEAK 1469


>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
            purpuratus]
          Length = 1815

 Score =  207 bits (526), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 175/563 (31%), Positives = 264/563 (46%), Gaps = 116/563 (20%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P + IL++LT ++  + F  ER E+LGD++LK  V+ +L+  YP   EG+L+ +R + 
Sbjct: 1253 PSP-TIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQ 1311

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGVL------PVFDEDTK-DGDSSLF-- 1490
            VSN  LY     K L   +Q   F PS  W  P +L      PV  E+T+ D D+     
Sbjct: 1312 VSNFNLYCLGDKKALAHKMQVSLFDPSINWLPPCLLVKESSRPVPKEETETDPDAGFVID 1371

Query: 1491 DQEKSVAEDKLGT-----------DKNYNEYEDDDMEDGELE------------------ 1521
              + S  E                ++N +++ D+++++ + E                  
Sbjct: 1372 TWDPSTVEGVDDFDDDDFDSDQCWEENSDDFSDEEIDETKAECPDDFFAREEKDKEQWSF 1431

Query: 1522 --GDSS---------------------SYRVLSSKTLAD-----VVEALIGVYYVEGGKD 1553
              GD                        Y + +  +++D      VEALIG Y V  G  
Sbjct: 1432 SVGDPDDVPGLTYTGAKTQDLGSVPQLPYEIHTQHSMSDKSIADCVEALIGCYLVSCGFR 1491

Query: 1554 AANHLMKWIGIQV------ESDPEEVGCPSRPA------CV------PES-VLRSVD--- 1591
            +A  +M W+G+ V      +S+         PA      C+      PES +LRSV    
Sbjct: 1492 SALLIMAWMGLDVLPTIDGQSNKRNDQSSDLPAADLPVSCLYGYLKQPESPLLRSVPNAE 1551

Query: 1592 ---------FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLI 1641
                     +   E  +  +F+DR  L++A TH+S   + ++ CYQRLEF+GDA+LD+LI
Sbjct: 1552 DVLQHQLVGYDGFEKTINYRFRDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLI 1611

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            T+HL+  +TNL PG LTDLR+A VNN  FA +AVK   H + +  ++ + + I +FV  V
Sbjct: 1612 TRHLYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFV 1671

Query: 1702 LEELLKPGFNSF-----------GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
              +    G +S               D + PK LGDI ES+AGAI+LDSG   + VW+V+
Sbjct: 1672 DAKNEALGMDSQLKYSEMDGEQEESEDIEVPKALGDIFESVAGAIYLDSGMSLNAVWKVY 1731

Query: 1751 QPLLDPMVT--PETLPMHPVRELQERCQQQAE-GLEYKASRSGNLATVEVYIDGVQVGVA 1807
             P++   +      LP+ PVREL E   + A  G   K        TV V   G   G+ 
Sbjct: 1732 YPMMKQQIEQYASDLPISPVRELLEMEPETARFGPPEKTIDGKTRVTVNVVGKGQFKGIG 1791

Query: 1808 QNPQKKMAQKLAARNALAVLKEK 1830
            +N    +A+  AAR AL  LK +
Sbjct: 1792 RN--YHIAKATAARFALRHLKSQ 1812



 Score =  167 bits (423), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 188/732 (25%), Positives = 318/732 (43%), Gaps = 161/732 (21%)

Query: 719  TEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLI---GHNNSQEMRTFQMQ- 770
            T +   IIFVE+   A+V+ ++F +L    P+L F+  + +    G   + +    Q+Q 
Sbjct: 472  TTNLCGIIFVEQRYTAVVMSRLFKKLSKRDPNLHFLLCSCIAMGSGRLGTTKKSAIQVQN 531

Query: 771  ------ETIAKFRDGRVTLLVATSVAEEGLDIRQCN---VVIRFDLAKTVLAYIQSRGRA 821
                  E + KFR   V +LVATS  E+G+++ +CN   +V+RFD   +  +Y+QS+ +A
Sbjct: 532  QRRKHEEVLRKFRRREVNVLVATSSVEDGVELPRCNGCNLVVRFDRPTSYQSYMQSKAKA 591

Query: 822  RKPGSDYILMIERGNLSHATFLRNARNSEE---TLRKEAIERTDLSHLKDTSRLISVDAV 878
            R P S Y+++I   ++    FL + +  +E    L +++  +T     +    L++   +
Sbjct: 592  RAPTSHYLMLIYEPDVQ--LFLGDVQCYQEFERVLNRKSKGKTQPQE-EVLDLLVADKQM 648

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            P  + + E      S+ +A+ +I+ YC++LPSD ++ L     M+  +    P E+   L
Sbjct: 649  PAYIPKNEEGSPRASMTTAIQIINRYCAKLPSDVFTHLTASCKMKERKGDVSP-EFQATL 707

Query: 939  QLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
            QLP N+P  K + GP     + A  AV + A   LH+ G   D L P     E   K   
Sbjct: 708  QLPINSPIRKPITGPWMKRKKWATMAVAVKAATILHKAGELNDYLQP--MGKESILKATD 765

Query: 998  N------DEGEPLPGTARHREFYPEGVADILQ-------GEWILSGRDGCTGSKL----- 1039
            N       +G+  PGT + R++Y + VA  LQ           L   D    S L     
Sbjct: 766  NAFNHLFADGQTRPGTTKKRQYYDKEVAKCLQECLPQADQPCYLYSVDMSLASPLPDILN 825

Query: 1040 -----FHLFMYTVKCVNNGISKD-------PFLTQVSDFAVLFSSELD------AELASL 1081
                  H    T +C     SK        P  T+  + AV    E D      +++   
Sbjct: 826  IRERRLHRPEETQQCFGIITSKQIPKVPGFPVYTRAGELAVSIMLESDEIRLSSSQIRRA 885

Query: 1082 KNFHVRLMSIVLDVDVEPYTTPWDPAKA---YLFVPV---VSDKSVDPMNELDWDLVEKI 1135
            ++FH  + S VL +D +P     +P K+   YL VP+    +  S  P + +DW  +EK+
Sbjct: 886  QSFHGCMFSEVLRLD-KP-NLELNPEKSQANYLIVPLKEGPAGPSGGP-SVIDWSFLEKV 942

Query: 1136 TKTDAWTNPLQRARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQ 1195
            +                                        ++ G    PT     + +Q
Sbjct: 943  S----------------------------------------LSSGHLDQPTQLPDYSQSQ 962

Query: 1196 FDVVKASGLVPDREAMQIH-NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESI 1254
            F+   ++ ++ D     I+ N D P  +  MAD                          I
Sbjct: 963  FEF--STDILADAVVTPIYRNIDQPQ-RYFMAD--------------------------I 993

Query: 1255 RYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPR 1314
             Y++   S FP +       +Y ++ DYY ++Y +++   +QPL+    +S   NLL+PR
Sbjct: 994  LYDLPVTSPFPSE-------KYETFVDYYFERYDIQISNFQQPLVDVDCMSSRLNLLTPR 1046

Query: 1315 FEH--------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVE 1366
            + +        S  Q  +G   L K  Y  L PELC+I+P+P SL R A  LPSI+ R+ 
Sbjct: 1047 YLNHKGKALPISTGQNKKGN--LQKKQY--LVPELCYIYPIPASLWRKAVCLPSILYRLN 1102

Query: 1367 SMLLAIQLKDKI 1378
            ++L+A +L+ ++
Sbjct: 1103 ALLIAEELRVQV 1114



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 6/217 (2%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKKMLAVFLVPKVP 362
           R YQL++LE A ++NT   L++G  KT +AV+LI+ +     L+ ++     +FLV    
Sbjct: 39  RHYQLELLETALEQNTTVCLQSGTEKTFLAVMLIKELSGSVRLRLEDGGKRTIFLVNSES 98

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            + +   VI   T   V  Y        WD  RWQ E +   V VM ++I L +L+ S +
Sbjct: 99  YLSEYGNVIHTHTDLNVKEYRNSDKMISWDRTRWQDEIEHCHVAVMDSEIFLKLLQMSYV 158

Query: 423 KMEAINLLILDECHHAVKK-HPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
            +  +NLLILDECHH ++  HPY  +M  F     ++ RP + G+T S   LKG      
Sbjct: 159 GLSMLNLLILDECHHTLQHLHPYHQIMLAF-KQYPRDDRPRILGLTES--ILKGDFKPCA 215

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVV 518
               I  LE+ L S      +   + K+   P E V+
Sbjct: 216 LEEHIDMLETSLQSKAKIATNLTSISKYGTKPKEAVI 252


>gi|321477029|gb|EFX87988.1| hypothetical protein DAPPUDRAFT_311480 [Daphnia pulex]
          Length = 711

 Score =  207 bits (526), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 203/735 (27%), Positives = 324/735 (44%), Gaps = 112/735 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS----ICNDLQRQNKKMLAVFLVPK 360
           R YQ+++ + A  +N I +L TG+GKT IA LLI+     +   L    K+   VFLVP 
Sbjct: 28  RDYQIELFQAALDENIIVYLPTGSGKTYIAALLIKEKSHEVAKSLSAGGKR--TVFLVPT 85

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           + L  QQA  +R+ T   V  + G MG D W   +W+ EF+T  VLVMTAQI ++IL H+
Sbjct: 86  IVLAIQQAAYLRKHTLLKVKEFYGSMGVDMWGRNKWETEFETNHVLVMTAQIFVDILNHA 145

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
                 +NLL+ DECH AVK  P   V+++   +    +RP + G+TA+    +    +V
Sbjct: 146 FFSPYQLNLLVFDECHSAVKDAPMKQVLTKL-RSCDVARRPKILGLTAALFRKRCKPREV 204

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
              IK   L   +  +V    D + + +    P EV+ +YD           + Q  V+ 
Sbjct: 205 RGVIK--QLSESMGCIVRIPSDVQTVYRSSTKPCEVIFQYDDV--------NIGQNPVSQ 254

Query: 541 E-----EAAQSSSRRSKW--QFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
           E     E   +S   S W   F+      +   L   +G     +S+    L   L+ I 
Sbjct: 255 ELSKLIETLLASCTLSSWIQDFLKLSQNYSGCGLNNTFG---GKKSEKIEVLCDALKDIG 311

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           + L   G + AY  AQ ++  L   +  +       Q +  +KV+++  C  ++   +  
Sbjct: 312 FLLENFGPYGAYHCAQLYIPILMGAKSRS-------QSADFNKVINI--CHKIQDVCAPV 362

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL 713
            AK    E   +    N I    LLD             I       +  P  ++     
Sbjct: 363 FAKYSAKERLVLFVNPNVI---RLLD-------------IIQNFNPKRCRPDEKAF---- 402

Query: 714 LKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH--NNSQEMRTF 767
                      IIFVER   A VL     ++     +L FVK    +G    ++  +R  
Sbjct: 403 -------KMCGIIFVERRSVASVLYHFLKDIRQHDENLEFVKPLFTMGQAAGSASSLRES 455

Query: 768 QM-----QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           Q+     ++ +  FR G   LLVATSV EEG+DI +CN+++RFD  +T   Y+Q++GRAR
Sbjct: 456 QILNMNQKDIMRDFRSGNCNLLVATSVLEEGVDIPECNLIVRFDKIRTYCDYVQTKGRAR 515

Query: 823 KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT--SRLISVDAVPG 880
              + + +++   +     FL +       + ++ +   +    KD     L S    P 
Sbjct: 516 SKKAFFCMLVSSSD--SKKFLEDMAQF-HAIEQQLVATGNFEDDKDAILDNLFSQIIEPY 572

Query: 881 TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTE------ 933
           T Y   + G  V+L S++ L++ YCSQL S   S+L P + I E  E    P        
Sbjct: 573 TPYG--NQGPRVTLQSSISLVNRYCSQLVSYGASVLVPRWSIKEVDESKADPLMLKKMKE 630

Query: 934 ----------------------YSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACK 970
                                 + C+L LP ++P + ++ G    + RLA++A  L AC+
Sbjct: 631 LMKQLPVVKPLSTKEPAEKIALFQCRLLLPKSSPLQGEVVGDPMLTKRLAKRAAALRACE 690

Query: 971 KLHEMGAFTDM-LLP 984
           +LH++    D+ LLP
Sbjct: 691 RLHQLKELDDLHLLP 705


>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1493

 Score =  207 bits (526), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 218/753 (28%), Positives = 327/753 (43%), Gaps = 136/753 (18%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL--IRSICNDLQRQNKKMLAVFLVPK 360
           Q R YQ ++L+ + K N I   +TG+GKT IA+L   I + C      NK  ++ FL P 
Sbjct: 22  QTRGYQQEMLDASLKGNIIIAQDTGSGKTRIAILRMKIEAECE----PNK--VSWFLAPT 75

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRH 419
           V L  QQA+VI+      VG   G      W ++  W+      ++LV T Q+LL+ LRH
Sbjct: 76  VALCQQQADVIKLDLPVSVGMISGACEPIQWKESALWRGVLQRHRILVTTPQVLLDALRH 135

Query: 420 SIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHTTS------------------KEKR 460
             I +   I LLI DE HHA   HPY+ +M EFY                      + +R
Sbjct: 136 GYINLGRDIGLLIFDEAHHATDNHPYNCIMKEFYFKLPVRQSDLDDAISRGVQRKFRNER 195

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVE 519
           P V G+TASP+           A ++  LES LD ++    ++R+EL K V  P    V 
Sbjct: 196 PMVLGLTASPI----FGGDPQHAFRV--LESNLDGIIRSPQQNRQELAKFVHRPIFRHVL 249

Query: 520 YDKAAS--------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY 571
           Y+  AS        L  L++ +  M +  EE    SS R +     A+ A   E +R   
Sbjct: 250 YNAPASDIQFMSCNLMGLNQVISGMNI--EEDPYISSLREQL----AKSAPGPERIRIDQ 303

Query: 572 GVSERTESD------GAANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQ 624
            +S+  +S       G  +L    + I Y   ++G W A + +A+    AL N       
Sbjct: 304 KLSKTLQSKSSYTHKGLRDLATTAQDICY---DVGPWAADWYIAKVIEKALDN------- 353

Query: 625 LDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDS--HV 682
                 E+    ++S+ Q                D E  +            LLD    V
Sbjct: 354 ------ETPFDNIISVWQ----------------DKEKRY------------LLDHLRQV 379

Query: 683 VSGGEHVDVIIGAAVADGKVTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAALVLPKVF 741
           V      D     A A  KV   VQSL+ +      H E +  I+FV R    L L +V 
Sbjct: 380 VVMPTSYDAEDVTADASEKVKVLVQSLLDEKAWAESHNEPYSGIVFVTRRDVVLALTEVL 439

Query: 742 AELPSLS-FVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVA 790
           A  P  S   +   L+G ++S   R+F              T+  FR G + L++AT+VA
Sbjct: 440 AHHPETSQRFRVGCLLGSSDSAYRRSFLDITRTLLKQSQANTLLDFRSGDINLIIATAVA 499

Query: 791 EEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE 850
           EEGLDI+ C  VIR+D    + ++ QSRGRAR+  S ++LM + G+      ++  +  +
Sbjct: 500 EEGLDIQACGNVIRWDAPNNMASWAQSRGRARRERSSFVLMFQAGSDDKQQVMKWEQLEK 559

Query: 851 ETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS 910
           + +   + ++ D  +  D +   ++D      +QVESTGA++SL SAV  ++ +CS LP+
Sbjct: 560 QMMDLYSNDQRDTGNTHDENDESTLDDHGDLEFQVESTGALLSLQSAVSHLNHFCSILPN 619

Query: 911 DRYSILRPEFIMERHEKPGG-------------PTEYSCKLQLPCNAPFE------KLEG 951
                  P + ++  + P G             P  + C + LP   P E      K E 
Sbjct: 620 SYRVSHLPIYDIDPPDMPEGWHSFEHKSNVPPYPGPFGCTVTLPRLLPSELRVFSVKREY 679

Query: 952 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           P   S + A Q V   A   L+      D LLP
Sbjct: 680 P---SKQSAIQHVAFNAYLALYNAKLLNDNLLP 709



 Score =  178 bits (452), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 166/546 (30%), Positives = 241/546 (44%), Gaps = 98/546 (17%)

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI-----LE 1389
            V L P    +  L  +    AQ LPSI+R +  M   I L+D +    P SKI       
Sbjct: 967  VLLLPRYTRVVLLSPAETEYAQILPSIIRHLSVMTTVISLRDTLFTGTPLSKIPLPLLTT 1026

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALTA   Q    YER E LGD  LK++VS  L   +P  HEG LTR +   VSN  L + 
Sbjct: 1027 ALTAPVSQGLINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGVSNAQLAKN 1086

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ K L  +I  DRF P +W      P                                +
Sbjct: 1087 AVLKKLYRWIIRDRFTPRKWTPRYCTP-------------------------------PQ 1115

Query: 1510 YEDDDMEDGELEG-DSSSYRV----LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
             ED   E+ E+EG DS   R     LS+K LADVVE+LIG  Y  GG D      K+ G+
Sbjct: 1116 NEDQIKEEVEVEGSDSRKSRAVIEELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGL 1175

Query: 1565 QVESDPEEVGCPSRPACVPESVLRSV----DFHA----LEDALKIKFKDRGLLVEAITHA 1616
             +E             CV E+ L  V    DF A    +E  L   F  + LL+EA+THA
Sbjct: 1176 GLE-------WWGLAKCV-ETALSVVETTDDFPAQVTDVELMLGYNFTRKLLLIEALTHA 1227

Query: 1617 SRP-SSGVSCYQRLEFVGDAVLDHLITKHLF-FSYTNLPPGRLTDLRAAAVNNENFARVA 1674
            S    +    Y+R+EF+GD++LD +IT +L+        PG +   +++ VN    A + 
Sbjct: 1228 SHQFDTRTVSYERMEFLGDSILDMIITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFIC 1287

Query: 1675 VKHKLHVH--------------------------LRHGS-SALDRQIRDF-----VKEVL 1702
            +++ L V                           L H S + L+ Q   F     VK  +
Sbjct: 1288 LRNSLKVDTSMPGPNHEGRITLNTQSQEIYLWQCLLHSSHTILEDQKTTFSRYNKVKAQI 1347

Query: 1703 EELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLD 1755
            E+ L+    F    L   +APK   D++ES+ GA +LDSG + +VV ++ +     P L+
Sbjct: 1348 EDALQNDSIFPWAALTKLQAPKFFSDMIESLIGAAYLDSGGNINVVREILRKLGILPTLE 1407

Query: 1756 PMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMA 1815
             +V  +   +HPV  +    Q++ + +EY  +  G   T  + IDG +   A N ++  A
Sbjct: 1408 RIVRDDVDVLHPVSRVSLWTQREYKTIEYIFNEEGGGVTCSILIDGKEAVRAHNERRGHA 1467

Query: 1816 QKLAAR 1821
             +  A+
Sbjct: 1468 GQEEAK 1473


>gi|350289218|gb|EGZ70443.1| P-loop containing nucleoside triphosphate hydrolase protein
            [Neurospora tetrasperma FGSC 2509]
          Length = 1547

 Score =  206 bits (525), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 219/784 (27%), Positives = 346/784 (44%), Gaps = 152/784 (19%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL++ E + K+N I  ++TG+GKT +AVL    I  +L++++K++   FL P V L
Sbjct: 76   ARAYQLEMFEASLKQNIIVAMDTGSGKTQVAVL---RIARELEQRDKRIW--FLTPTVAL 130

Query: 364  VYQQAEVIREQTGYVVG-HYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSI 421
              QQ +V++ Q   V     CG+ G D W  Q  W       +++V T QIL +   HS 
Sbjct: 131  ARQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSF 190

Query: 422  IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQ 479
            +++++++L+++DE H+    HP + +M+E Y    K     PS+ G+TASP+    ++  
Sbjct: 191  VRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPLKSNNLAD- 249

Query: 480  VDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEY-------------DKAAS 525
                  I  LE  LD+V  T    R+EL  HV  P  +VV Y             D    
Sbjct: 250  ------IEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGTEPTPTDLMTR 303

Query: 526  LWSLHEQL---KQMEVAVEEAAQSSSRRSKW-QFMGARDAGAKEELRQVYGVSERTESDG 581
                + +L   K  +V + +A ++   R K  Q +  +D  A++ELR VY          
Sbjct: 304  FLEAYHRLDISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRGVY---------N 354

Query: 582  AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
             A L+++         E+G W A                          + YL++ VS +
Sbjct: 355  RALLVRR---------EIGPWAA--------------------------DYYLTRTVSHM 379

Query: 642  QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG- 700
              EL                           E GE    H   G     + I A   +  
Sbjct: 380  LAEL---------------------------ERGEPPAQHRYIGEALRSIPIPAISKEPI 412

Query: 701  KVTPKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGH- 758
            +++PKVQ+L+K+L  +Q  +D   I+FV ERV+ ++V   +     +    ++AS+IG  
Sbjct: 413  QLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTASMIGTA 470

Query: 759  ------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
                   N  +M   +   ++  FR GR  LLVATSV EEG+D+  CN+VI FD    + 
Sbjct: 471  SVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIK 530

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHATFLRN-ARNSEETLRKEAIERTDLSHLKDTSR 871
            ++IQ RGRAR+  S   LM++  +   A    N  R  +E    E  +  +L  L D   
Sbjct: 531  SFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMKERYEDEMRQNAELELLDDP-- 588

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIMER----HE 926
               + + P  V +VESTGA +++      ++ +C+++ S  RY    P F++ +      
Sbjct: 589  --RIGSYP--VLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYLQKEPYFVIRQVSPDPA 644

Query: 927  KPGGPTEYSCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
             PG  T     + LP + AP     E L     +S +LA       A K L+  G   + 
Sbjct: 645  SPGRRTLLQATVHLPASLAPDLRRHESLW--TWTSEKLAIMDASFQAYKALYNAGLVNEN 702

Query: 982  LLPDKGS------GEQQEKVDQNDEGEPLPGTA-----------RHREFYPEGVADILQG 1024
            LLP K S      G+    +    + +P P  A           RH      GV   L+ 
Sbjct: 703  LLPTKVSDFLADLGDDPGHIWVKTQFDPWPEVAYAWQESASLYSRHLTVLVPGVEKPLEF 762

Query: 1025 EWIL 1028
            E+IL
Sbjct: 763  EFIL 766



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 142/331 (42%), Gaps = 59/331 (17%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK-DKI------NYPVP 1383
            K Y   LP     +   P    +    +P+  R VE  L+A  L  +++      N P+ 
Sbjct: 936  KLYRKVLPSTQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLPL- 994

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
               I  AL ++  +    YER E +GD  LK+         +P  HE  L++ + ++V+N
Sbjct: 995  ---ITTALISSGSRGPTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNN 1051

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
            + L + +   GL  YI     A  +W      P F ED         D+ KS        
Sbjct: 1052 VRLCRASRDFGLDEYI-IHSAASKKWR-----PKFVED-------YLDEMKS-------- 1090

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                               +S+  R +SSK +ADVVE+LIG  Y+ GG   A   +  + 
Sbjct: 1091 ------------------PESAETRQMSSKMVADVVESLIGAAYMCGGMSKALECVALLL 1132

Query: 1564 IQVESDP---EEVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS 1617
               +S     +E+   SR       P+  + S     LE A+   F  + LL+EA+TH S
Sbjct: 1133 PTPKSSQFKWQEISL-SRAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLIEAMTHPS 1191

Query: 1618 RP--SSGVSCYQRLEFVGDAVLDHLITKHLF 1646
                S+  SCY+ LEF+GDA+LD ++ K L 
Sbjct: 1192 CAGLSTNESCYELLEFLGDAILDVIVVKRLM 1222



 Score = 41.6 bits (96), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 1620 SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            S G + Y+RLEF+GD +L           + N     L+  +   VNN    R +    L
Sbjct: 1004 SRGPTNYERLEFIGDTILKFCACLTASALFPNHHERLLSQWKDKLVNNVRLCRASRDFGL 1063

Query: 1680 HVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
              ++ H S+A  +    FV++ L+E+  P           + K++ D+VES+ GA ++  
Sbjct: 1064 DEYIIH-SAASKKWRPKFVEDYLDEMKSP---ESAETRQMSSKMVADVVESLIGAAYMCG 1119

Query: 1740 G 1740
            G
Sbjct: 1120 G 1120


>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
          Length = 345

 Score =  206 bits (525), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 198/342 (57%), Gaps = 15/342 (4%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E+ L+ +F+++ LL EA+TH+S    GVS Y+RLEFVGD VL   I+ +LF +Y +L P
Sbjct: 9    VENILRYRFRNKKLLEEALTHSSF-LDGVS-YERLEFVGDPVLSLAISNYLFLAYPDLDP 66

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G+L+ LRAA V+ E  ARVAV+  LH  +RH +  L  ++  FV  V  E + P  +   
Sbjct: 67   GQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERFVDAVKLE-INPVAHG-- 123

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVRELQ 1772
             G  KAPKVL D+VES+A AI++D   D   +W + + +L+P+VTP+ L     PV  L 
Sbjct: 124  -GSVKAPKVLADVVESVAAAIYVDVNFDLQTLWVIMRGVLEPIVTPDALEKQPQPVTMLY 182

Query: 1773 ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
            E CQ++ + ++ K SR G+L+  +V++DG  V  A + QK  A+  AA+ AL  L     
Sbjct: 183  EMCQKKGKQVDIKPSREGDLSVAKVFVDGEFVASASSSQKDHAKLEAAKIALGKLAHLVP 242

Query: 1833 AEAKEKGDE---NGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFT 1887
            +  K+       N    +NGT      +  L ++C  + WP+P Y   ++ GP+H K+F 
Sbjct: 243  STDKKSATNMKLNFAADENGTWVVEAPKNKLRELCAVKKWPIPEYIIEKDSGPSHEKKFV 302

Query: 1888 YAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNKW 1929
             AV++ T D     +  G+    VK A++SAA L++  L ++
Sbjct: 303  CAVQIPTADG--ILQMSGDEKSRVKDAENSAASLMIRALQQY 342



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 40/72 (55%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EALT +S  +   YER E +GD  L   +S +LFL YP    GQL+ +R   VS   L +
Sbjct: 25   EALTHSSFLDGVSYERLEFVGDPVLSLAISNYLFLAYPDLDPGQLSALRAANVSTEKLAR 84

Query: 1449 YALSKGLQSYIQ 1460
             A+  GL  +++
Sbjct: 85   VAVRIGLHRFVR 96


>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
          Length = 1490

 Score =  206 bits (525), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 234/467 (50%), Gaps = 49/467 (10%)

Query: 1375 KDKINYPVPASKILE--------------ALTAASCQETFCYERAELLGDAYLKWVVSRF 1420
            +D+ N PVP  +IL               ALT     + F  ER E LGDAYLK++ S F
Sbjct: 988  QDQNNIPVPVLQILSLKCSYGPDPGQIAYALTKTG-HDAFNLERLETLGDAYLKFITSLF 1046

Query: 1421 LFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFD 1479
            L+ ++P+  EG LT ++ +++ N  LY   + K +   ++ D F P S + AP    V+ 
Sbjct: 1047 LYNEFPKHSEGYLTALKGKIIGNRNLYYCGIKKNIPGCMKVDSFIPLSNFIAPA-YTVYR 1105

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLG----TDKNYNEYEDDDMEDGELEGDSSSY-- 1527
            +        K   + L++ E    E   G      KN  + +  D E  E +     Y  
Sbjct: 1106 QVQDVLLHAKVSPNVLYEIEIPRDEQLSGHISEATKNAIQTKILDWETAEAQTGMEHYLG 1165

Query: 1528 -RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI---QVESDPEEVGCPSRPACVP 1583
             + +S KT+AD VEALIGVY    G      L++W  I   +++++    G P  P    
Sbjct: 1166 IQTVSDKTVADCVEALIGVYLRSMGIKDTLILLQWFQILPYKIDANELLFGTPQNPIISE 1225

Query: 1584 ESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLI 1641
             ++   + + + +E  L  +F +RG L++A TH S  P++   CYQRLEF+GDA+LD LI
Sbjct: 1226 GNINHLMPWASNIETKLGYRFNNRGYLLQAFTHPSYTPNNMTECYQRLEFLGDAILDFLI 1285

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-- 1699
            T +++ S  NL PG LTDLR+A VNN  FA + V+H LH+ L   +  L+  I  FVK  
Sbjct: 1286 TNYIYESCGNLNPGALTDLRSALVNNITFACLTVRHGLHIALLSYAPKLNNIIERFVKFQ 1345

Query: 1700 ---------EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                     E+L  LL+    +        PKVLGDI ES+ GAI++DS ++ +VVW + 
Sbjct: 1346 EERNYAVNDELLWILLEEDECNMA-EHVDVPKVLGDIFESVIGAIYMDSNKNLTVVWNIV 1404

Query: 1751 QPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV 1795
              ++   +    + +P  P+R L E    + + L+     + N+  V
Sbjct: 1405 YSIMHKEIDEFSKNIPKQPIRVLYETHGARPQFLKATIIDNTNIVMV 1451



 Score =  150 bits (380), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 11/233 (4%)

Query: 292 KSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK 351
           +++ KE +P    RPYQ+D+ E A K+N I +L TGAGKT IAV+LI+ +  D++R   +
Sbjct: 2   ETDIKEFIP----RPYQIDLFETACKENVIIYLPTGAGKTFIAVMLIKELSADIRRPYAE 57

Query: 352 --MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMT 409
                +F+V  VPLV QQ++ I+  TG   G    E G DFW  + W    +  +VLVMT
Sbjct: 58  GGKHTIFIVNTVPLVIQQSDYIKRLTGLSCGTLSSEEGVDFWHDEEWNEHLNQHEVLVMT 117

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
           +QIL+N L H  I +  INL+I DECH AV  HP   +M + +    KE++P V G++AS
Sbjct: 118 SQILVNALCHGYIFLNRINLIIFDECHRAVNDHPMRQIM-QLFENCPKEEQPRVLGLSAS 176

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
            +N      +V   ++   +         T+ D+     +   P E ++++D+
Sbjct: 177 LLNSNVRLKKVQSVMQSLEVTFNARIATATVADK----SYYASPIEEIIQFDQ 225



 Score = 90.9 bits (224), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 121/240 (50%), Gaps = 21/240 (8%)

Query: 705 KVQSLIKILLKY----QHTEDFRAIIFVERVVAALVLPKVFAELPSL----------SFV 750
           +++ L+K L  +     H + F  IIFV+R   A +L ++   + SL           FV
Sbjct: 353 QIRKLLKALKDFYNNKHHDQVFCCIIFVQRRFTAKILYQILKSI-SLHDEEYKFLHPEFV 411

Query: 751 KSASLIGHNNSQEMRTF--QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
              S     N +E+     + +E + +FR+G +  +VAT V +EG+D+ +C+++IR+DL 
Sbjct: 412 MGVSSNPFKNPKELLCVSERNKEVLLRFRNGLLNCIVATDVIDEGIDVPKCSLIIRYDLP 471

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
             V  YIQS+GRAR   S Y++++++ +  +       +  E+ L++  +++TD  ++  
Sbjct: 472 MDVRTYIQSKGRARHAYSRYVVLLQKDDSQYLRRHNEYKKIEQHLKQLLVDKTDERNVPT 531

Query: 869 ----TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
                S L   D  P  V   +     ++   A+ +I+ YC+ L   +++ L P + + +
Sbjct: 532 ENEIQSELYQHDIEPYQVISDDGQVCCITEQMAINVINQYCTSLLKSKFACLSPIWTLHK 591



 Score = 45.8 bits (107), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 20/145 (13%)

Query: 1232 AGDLEGRIVTAAH-SGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVE 1290
            + D E  +V   + +   + V  +  ++   S FP          +S+Y  YYK+K+ + 
Sbjct: 759  SSDYELALVKPNYRAADTYIVTQVCDDIMPSSCFPTDH-------FSTYIHYYKEKHRLV 811

Query: 1291 LIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGS 1350
            +   +QP++  + +S   + + PR + +E ++              L PELC     P  
Sbjct: 812  INNLEQPMLEVKSISRAIDYIMPRDKSTESKKEH------------LVPELCIRINFPAL 859

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLK 1375
                A  LPSI+ RV  +L+A  L+
Sbjct: 860  YWLKATTLPSILHRVSQLLIAEDLR 884


>gi|409050172|gb|EKM59649.1| hypothetical protein PHACADRAFT_114689 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1230

 Score =  206 bits (523), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 175/598 (29%), Positives = 266/598 (44%), Gaps = 64/598 (10%)

Query: 1242 AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRG 1301
            A     R YV  +R++++  S          P+ Y  Y     +++   L  + QPLI  
Sbjct: 623  AVEFTNRHYVLKLRHDLSPRSKMKEGSAEAEPITYLDYCKSRVKEFQ-GLKDENQPLIEV 681

Query: 1302 RGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI 1361
              V    N L+P  + +   +              L PELC+   +P S+ R    LPSI
Sbjct: 682  SLVPPVANNLAPASKDTSTVKNPAR---------LLVPELCYKFVIPASIWRTVLLLPSI 732

Query: 1362 MRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRF 1420
               ++ MLL  +++  + N  +    + +A+T  S      YER ELLGDA LK ++S +
Sbjct: 733  THMIDRMLLVKEMRVAVFNQSIGEGDLFQAVTPVSANVEKDYERLELLGDALLKDILSTY 792

Query: 1421 LFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDE 1480
             F   P K EG L+  R Q+VSN +L+Q A++ G+  +IQ+       W      P    
Sbjct: 793  FFATMPTKREGALSSARGQVVSNKMLHQNAMAAGMPPWIQSKPLVVKLWT-----PYLVA 847

Query: 1481 DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVE 1540
                GD    +  +          K   + E+ D++             L  KT+ADVVE
Sbjct: 848  RQDAGDVGTSNDHRR--------GKRQKQLEEQDVQ------------WLGDKTVADVVE 887

Query: 1541 ALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPACVPESVLRSVDFHAL 1595
            A++G  + +GG D     MK +   +      SD   V  P+ P+      L      A+
Sbjct: 888  AVVGAAFHQGGTDNVLRTMKILQFNMPEIAEHSDFWRVYAPNAPSHKTFCDLPVGTSEAV 947

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
            E     KF    +L EA+TH S  +  ++ Y RLEF+GD +LD  I  ++F +Y  L PG
Sbjct: 948  EAITGFKFHTPAILAEALTHGSISNQHMTSYDRLEFLGDGILDSNIVWYIFKAYPKLSPG 1007

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-----------E 1704
             L+ L+AA V+N   A VAV+  L+ H+R+ S  +   ++ +V+++             E
Sbjct: 1008 GLSLLKAAMVSNLTLAAVAVESGLYEHVRYCSKEIMSAVKLYVQKIFTLRDQEYRDAEAE 1067

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM----VTP 1760
               P  N F L +  APK L D+VE+I GAI++     T  V   FQ +L P     +  
Sbjct: 1068 SRLP--NQFWL-EVDAPKPLADLVEAIVGAIYVSDRFGTQGVKTFFQKVLRPFYDRHIRL 1124

Query: 1761 ETLPMHPVRELQERCQQQAEGLEYKASRSGNLAT---VEVYIDGVQVGVAQNPQKKMA 1815
             TL  HP   L E    QAEG +  A R  NL      EV I  + +  A  P   ++
Sbjct: 1125 HTLAPHPGTSLFEFL--QAEGCQQHAMRKTNLGKEVRSEVVIHDIVLASAAEPTSNLS 1180



 Score = 44.3 bits (103), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 21/289 (7%)

Query: 702 VTPKVQSLIKILLKYQ-HTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHN 759
           V+ +   L+ +L   + H+  FR +I V++ V A+VL  +   L  +L  V+  +L    
Sbjct: 139 VSSQFAKLVDVLQSSETHSNSFRCVIMVKQSVTAVVLAILLRLLDDTLPHVRPVAL---T 195

Query: 760 NSQEMRTFQMQETIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            S  + + Q   T+   F  G   LL+   ++E+ LD+     +I F+L +   A + +R
Sbjct: 196 TSGTLSSPQDNVTLLHSFSSGTHNLLITNKLSEK-LDLCPVTKIIHFNLLEEGPASLLAR 254

Query: 819 GRA-RKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI---- 873
               R      + M ++ N  H   L++   + +   + +   + + +  DTS L+    
Sbjct: 255 ALTDRNSALHVVYMADQSNDLHKNILKHCGITNQHTPEASGTSSTVQNPPDTSMLLDEDN 314

Query: 874 SVDAV--PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
           S+D V  P T  ++ +  A V++   +G +    S+    R S    E  +E  +     
Sbjct: 315 SIDFVEEPTTGKKINAELAPVAIERYLGSLRDMFSE--DCRASTSWCE--LEPFQDNNLV 370

Query: 932 TEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
              S    LP   P  +LE     S + A   +CL+ CK+L + G   D
Sbjct: 371 LHLSLPDTLPIPEPLRRLE---TQSPQGATAQLCLSTCKQLFKAGFLRD 416


>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
          Length = 1257

 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/450 (33%), Positives = 227/450 (50%), Gaps = 43/450 (9%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            +I+ ALT     + F  ER E LGD+YLK++VS FL+ K+P  +EGQLT ++ +M+ N  
Sbjct: 779  EIVHALTTKLGSDMFNLERLETLGDSYLKFIVSLFLYHKFPTFNEGQLTALKGKMIGNRN 838

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDE------DTKDGDSSLF-----DQEK 1494
            LY     KG+   I+ D F P     P    V+        D     + L+     + E+
Sbjct: 839  LYYCGNKKGIPGRIKNDAFVPMSNFIPPAYSVYHPLQKILMDELVAPNVLYEFLIPNMER 898

Query: 1495 ---SVAEDKLGTDK-NYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
                ++ED L   K   + ++  D + G         ++LS KT+AD VEALIGVY    
Sbjct: 899  FTGYISEDTLNMMKQTVSSWDKRDKQTGV--EHYLGVQILSDKTVADSVEALIGVYLKNN 956

Query: 1551 GKDAANHLMKWIGIQVESDPEEV-GCPSRPACV----PESVLRSVDFHALEDALKIKFKD 1605
                A  L+KW GI  +   + + G  S+   +    P   +   D   LE  +  KFK+
Sbjct: 957  HIKGAAKLLKWFGILPDVKIDMLLGSISQNPVIGVGDPNYYMPWAD--TLESKIGYKFKN 1014

Query: 1606 RGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            R  L++A TH S  ++G++ CYQRLEF+GDA+LD LIT +++ +  NL PG LTDLR+A 
Sbjct: 1015 RAFLLQAFTHPSYTANGITECYQRLEFLGDAILDFLITCYIYENDVNLSPGDLTDLRSAL 1074

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPGFNSFGLGD 1717
            VNN  FA ++V+H LH  L   +  L   I  FV+        V +ELL   +      +
Sbjct: 1075 VNNITFACLSVRHGLHTALLAYAPKLHEIIDCFVRFQEERDYVVNDELL---YVLIEEDE 1131

Query: 1718 CK------APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVR 1769
            C        PKVLGD+ ES+ GAI+LDSG++ + VW++    +   +      +P  P+R
Sbjct: 1132 CNITEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIIYSFMHKEIDEFSRNIPKQPIR 1191

Query: 1770 ELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
             + E      + LE    +   +  V + I
Sbjct: 1192 VIYENTDICPKFLEATLIKGTGMIMVPLKI 1221



 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 125/244 (51%), Gaps = 15/244 (6%)

Query: 748 SFVKSASLIGHNNSQEMRTFQM-------QETIAKFRDGRVTLLVATSVAEEGLDIRQCN 800
           SF++   +IG  N+    T ++       +E + + ++G    +VAT V +EG+DI  C 
Sbjct: 97  SFLQPDYVIGFQNNPYKNTREVSCIAKWNKEVLQRLKNGSSNCIVATDVVDEGIDIPMCT 156

Query: 801 VVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI-- 858
           ++IR+D+     AY+QS+GRAR   S Y++++E  +          +++E+ L++  +  
Sbjct: 157 LIIRYDVPTDFRAYVQSKGRARHNLSSYLILVENDDEDFLKKYHQYKDTEKKLKRILVGK 216

Query: 859 -ERTDLSHLKDTSRLIS-VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSIL 916
            ER   +     + L S  D  P TV   +   + ++  +A+ LI+ YC+ L + ++  L
Sbjct: 217 NERPLPTQDDIVNGLYSDFDIEPYTVKCDDVVKSRLTEFTAIDLINMYCAALLTSKFVYL 276

Query: 917 RPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEM 975
            P   + + +K      Y   L+LP  +P +  + G    S+  A+++V +  C +LH++
Sbjct: 277 VP---IWKLDKDDSKNMYRISLKLPNLSPLKDVIYGDFMRSIDGAKRSVAMKTCIQLHKL 333

Query: 976 GAFT 979
           GA T
Sbjct: 334 GALT 337



 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 321 IAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVPLVYQQAEVIREQTGYV 378
           I +L TGAGKT IAV+L++ +  D+++  Q     ++F+V  V LV QQ+  I+  T   
Sbjct: 2   ILYLPTGAGKTYIAVMLLKHLSRDVRKPYQEGGKRSIFVVNTVALVEQQSTYIKRHTDLR 61

Query: 379 VGHYCGEMGQDFW 391
              Y G+M  DFW
Sbjct: 62  CKGYSGDMMVDFW 74



 Score = 44.3 bits (103), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 1257 EMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFE 1316
            ++T ES FP ++       + +Y  YYK+K+G+ +   +Q ++  + +    N + PR  
Sbjct: 521  DLTPESYFPNED-------FDTYTHYYKEKHGLIIENLQQSMLEVKPIPIKINYIKPRKL 573

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD 1376
                 + +  +   +     L PELC+    P      A  LPSI+ R+  +L+A  L+ 
Sbjct: 574  SEGPLKNKKTDDTVEDLQEHLVPELCYKINFPSVYWLKATTLPSILHRICQILIAEDLRV 633

Query: 1377 KI 1378
             I
Sbjct: 634  TI 635


>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
          Length = 1646

 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 182/703 (25%), Positives = 333/703 (47%), Gaps = 70/703 (9%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           ++R YQ ++ ++  + NTI +L TGAGKT IA++ ++   NDLQ+   +    ++FL   
Sbjct: 16  KSRGYQDEIFKKCVENNTIIYLPTGAGKTYIAIMAMKHFANDLQKPISEGGKRSLFLTNT 75

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
             L  QQAE I++ T   V  Y G++  D W   +W  EFD  QV+  T QI+L+I+RH 
Sbjct: 76  KALATQQAEYIQKLTPLRVAVYTGDLNVDAWKKDKWYEEFDQHQVITATVQIVLDIIRHG 135

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +K+   NL++ DECH+A  +HP + +M++F     ++  P V G++ S  +       V
Sbjct: 136 YLKLSNFNLIVFDECHNAQGEHPMAHLMAKFTDIPERD-HPRVIGLSGSLTSSSIKPQNV 194

Query: 481 DCAIKICNLESKLDSVVCTIKDRK---ELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
              +K  +LE+K  + + T++      E+  H   P E  +++++ A        ++ ++
Sbjct: 195 LKELK--DLEAKFRATIVTVQGLNAYVEVLMHSTKPKESCIQFEQNAP-------MEFID 245

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
             V +A +  +    W  +  R+    E L++V  + E +       +      INY  G
Sbjct: 246 FIVNKADELKNTIESWPIINTRNT-TDETLKRVLELFEFS----VCFIDSACLTINYHTG 300

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
             G         S L  +   E    + D  F ++ L ++   L     E    +K+   
Sbjct: 301 LYGGLL------STLATIVELELKKREADTTF-DAILHRISERLYDSEEEEEEEEKETNG 353

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
           ++ +N  ++  TN  E+  ++ ++                     TP+VQ L+  L K+ 
Sbjct: 354 MEIDNKTID-ETNIAEDPVMILTN--------------------STPQVQRLLIYLKKFV 392

Query: 718 HTE---DFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGHNNS--QEMRTFQ 768
             +     + +IFV+R  +A +L  +        P ++ ++   + G N      + T  
Sbjct: 393 QDDPKRQLKGLIFVKRRYSAKILCHIIRRFMNSYPDIN-IRVDFMTGSNTKIPDSIETIL 451

Query: 769 MQE----TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
            ++     + KF+   V L+V TSV EEG+D+++CN+VI FD  +    Y+Q++GRAR P
Sbjct: 452 AKKCNDRVLDKFKRDEVNLIVTTSVLEEGIDLQECNLVIAFDRPEHYRQYVQTKGRARMP 511

Query: 825 GSDYILMIERG-NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
            S+Y++M+  G  L     ++      + LR+  +ER  +  ++     ++  A      
Sbjct: 512 NSEYVIMVPMGQQLKLEQKVKEWGEVNDILRQYLVERA-VDRIQPNKEDMNKIAEREFNE 570

Query: 884 QVEST-GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
           Q ++  GAV+   SAV L++ YC  LP D+++   P     R E  GG  +    + LP 
Sbjct: 571 QYKTIGGAVIDHFSAVSLLNRYCDVLPRDQFT--DPVITWRRTEVKGGKIQ--VHILLPI 626

Query: 943 NAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            +P   ++ G    +++LA+++    AC KL+E  A  +  +P
Sbjct: 627 QSPISAEICGNAMPNLKLAKRSAAFKACIKLYEQKALNENAMP 669



 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 223/459 (48%), Gaps = 68/459 (14%)

Query: 1370 LAIQL-KDKINYPVP----ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
            LAIQL K K++ PVP       +L A+T AS  + F  E  E+LGDA+LK+ VS  L   
Sbjct: 1144 LAIQLLKTKLSSPVPRGVEQHDMLAAITTASAGDLFHMELFEVLGDAFLKFGVSLSLMHN 1203

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAP--GVLPVFDED 1481
            +   HEG L+ M+ ++V N  L   A+   L   I  + F P   W  P   V  V    
Sbjct: 1204 HQDWHEGFLSAMKGKIVGNRNLCYNAIKMKLPGMINKNNFDPKDDWQPPMFKVDDVIKNK 1263

Query: 1482 TKDGDSS---LFDQEKSVAEDKLGT---------DKNYNEYEDDDMEDGELEGDSSSYRV 1529
             +  + S   LF+   S  E + G          ++ +N Y ++D E G ++      R+
Sbjct: 1264 MRQKNISPNLLFELSLSKMEIESGKVSEQNVEMLEQTFNRYVNNDQE-GSMQNVLGLQRI 1322

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRS 1589
             + KT +D VEA++G   V  G D    +++   I           P R   V  + L S
Sbjct: 1323 -ADKTSSDCVEAILGACLVSIGVDRTFKVLEMFNI----------LPKREN-VDITKLLS 1370

Query: 1590 VDFH---------------------ALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQ 1627
              FH                      LE  +  KFKDR  L++A+TH + P++ V+ CYQ
Sbjct: 1371 NQFHNPRVRTNIKDIEIDSFLPNHTELETNIGYKFKDRAYLLQALTHPTYPTNRVTGCYQ 1430

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            +LEF+GDAVLD LIT +++     + PG+LTDLR+A VNN   A + V++ +H+++   +
Sbjct: 1431 QLEFLGDAVLDFLITSYIYERCPEMDPGKLTDLRSALVNNVTLACICVRYNIHLYILSQN 1490

Query: 1688 SALDRQIRDFV-------KEVLEE---LLKPGFNSFGLGD-CKAPKVLGDIVESIAGAIF 1736
            +AL   I  FV        EV +    L++       + +  + PK LGD++E++ GAIF
Sbjct: 1491 AALTEFISQFVDYQIAHNHEVTDHVDLLMEEKDVECKMAEYVEVPKTLGDVIEALIGAIF 1550

Query: 1737 LDSGRDTSVVWQVFQPLLDPMVTP--ETLPMHPVRELQE 1773
            LDSG +  V W+V   L+   +      +P+  VR L E
Sbjct: 1551 LDSGNNLEVTWKVIYGLMQKEINKFMANVPLSIVRRLYE 1589



 Score = 49.7 bits (117), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 24/161 (14%)

Query: 1227 DSCANAGDLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYY 1283
            ++  N  D   R+V   +S     R+ V  +  E T  S FP K        Y SYA Y 
Sbjct: 867  NAIYNENDWLHRVVCKWYSTDFESRYIVTRVSNEKTPFSDFPNKT-------YRSYAAYV 919

Query: 1284 KQKYGV--ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYV---FLP 1338
              KY    +++ + Q LI  +G++   NL+ P         GEGE+   +        L 
Sbjct: 920  MDKYPSIDKVVGEDQFLIEVKGITRNLNLMHP---------GEGEDGRRQRTNRGPETLI 970

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PELC     PG L   A  LPS +RR+  +L A  ++  IN
Sbjct: 971  PELCHNFMYPGDLWLKAIVLPSALRRIYYLLHAEHIRIAIN 1011


>gi|305354766|emb|CBL30926.1| Dicer protein [Echinococcus multilocularis]
          Length = 1981

 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 239/517 (46%), Gaps = 87/517 (16%)

Query: 1375 KDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            K +I Y    + IL++LT     +    ER E +GD++LK+ V+  LFL+YP+ HEG L+
Sbjct: 1494 KGQIVYKPGPTMILQSLTLLGAGDFINMERLETIGDSFLKFAVTMDLFLRYPEAHEGHLS 1553

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDGDSSLFDQE 1493
             +R Q+V N  LY+    K L   I    F P   W  P  +   D       + + +Q 
Sbjct: 1554 SLRSQIVGNSNLYRLGCEKNLPGRIVGMAFEPHENWLPPCYVCTTDSTNNIASTRIKNQC 1613

Query: 1494 KSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
             S+                             +++ L++K++AD VE+L+G Y  E G+ 
Sbjct: 1614 PSL-----------------------------THQFLTNKSVADCVESLVGCYLTERGER 1644

Query: 1554 AANHLMKWIGIQVESDPEEV---GCPSRPA----------CVPESVLRSVDFHALEDALK 1600
            +A  L++W GI+      E+   G P + A             E V R+  F  LE+ + 
Sbjct: 1645 SALKLLQWFGIECLPPAGEMQPAGSPWKLAEEKPLSKVEEATVERVYRAGRFSKLEEIIG 1704

Query: 1601 IKFKDRGLLVEAITHAS------RPS-----------SGVSCYQRLEFVGDAVLDHLITK 1643
              FK+R LL+EA TH++       PS           S    Y+RLEF+GDAVLD+ +T+
Sbjct: 1705 YTFKNRRLLIEAFTHSTCRDLHGPPSDDDGGFHGSVTSISGGYERLEFLGDAVLDYAVTR 1764

Query: 1644 HLFFS--YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI------- 1694
             LF +     L PG LTDLR+A VNN  F  +AV+H LH  LR  +  L R +       
Sbjct: 1765 FLFTTDATARLSPGALTDLRSALVNNVVFGALAVRHGLHAFLRAAAPPLTRTMALFLRHH 1824

Query: 1695 RDFVKEVLEELLKPGFN----------SFGLGD-----CKAPKVLGDIVESIAGAIFLDS 1739
             D V+  L+ L+ P  N          S   GD      + PK LGD+ ES+AGA+FLDS
Sbjct: 1825 HDVVRGDLDVLIAPEVNACRENKGATASQAEGDRANEEVEVPKALGDVFESLAGAVFLDS 1884

Query: 1740 GRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV 1797
            G   + +W+VF PLL   +      +   PVR L E C ++ +  E    R      V V
Sbjct: 1885 GLCLNTLWRVFFPLLRERIERYSTCVAKSPVRRLLELCPERVK-FERPMVRPDGKMRVVV 1943

Query: 1798 YIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAE 1834
             + G+   V      ++A+  AA  A   + E  T +
Sbjct: 1944 RVAGIGRYVGVGRTYRLAKSAAADLAYRRVTEASTEQ 1980



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 19/143 (13%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVEL--IFKKQPLIRGRGVS 1305
            R+YV ++R +++  + FP  +       Y+++ADYY  KYG+ L      QPL+      
Sbjct: 1224 RYYVVAVRNDLSPATEFPSPQ-------YATFADYYACKYGLRLSGAPSDQPLLDAAYAP 1276

Query: 1306 Y-CKNLLSPRFEHSEEQEGEGEEILDKT---------YYVFLPPELCFIHPLPGSLVRGA 1355
                 LL PR   ++ +   G    + T         +   L PE C  H +P ++ + A
Sbjct: 1277 LRLAPLLVPRGCVAQRKANNGVASGNATSTSKHAIPRHIQLLVPEFCHRHAMPATVWQKA 1336

Query: 1356 QRLPSIMRRVESMLLAIQLKDKI 1378
              LPSI+ R++ +LLA +L+ +I
Sbjct: 1337 ICLPSILYRLQHLLLAEELRSEI 1359


>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
          Length = 2239

 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 167/526 (31%), Positives = 247/526 (46%), Gaps = 82/526 (15%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R
Sbjct: 1711 SHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLR 1770

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV--------------LPVFDEDT 1482
             + VSNL LY+    K     + A +F P   W  P                +P F  + 
Sbjct: 1771 SKQVSNLNLYRLGKHKIFGESMIATKFEPHDNWLPPCYFVPKELERALIEAGVPAFQWNQ 1830

Query: 1483 KDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV---------LSSK 1533
             +   SL D      E+     K   E     M D  L  ++    V         +  K
Sbjct: 1831 AEL-PSLRDMS---TEEINAIVKERGEQLQGTMTDSPLSVENLPCFVPCNLITQHSIPDK 1886

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE-------SDPEEVGCP---------- 1576
            ++AD VEALIG Y +E G   A   M W+GI+V        +D   +  P          
Sbjct: 1887 SIADCVEALIGAYLIECGPRGALIFMSWLGIKVMPCEEVKVTDDTALERPVGSHLPDQNN 1946

Query: 1577 -------------------SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS 1617
                               S P C  E +L    F  LE +L+ +F DR  L++A+THAS
Sbjct: 1947 VQIRYGFVKPPRSPLLRHVSNPECELERLL--AGFDVLERSLRYRFNDRSYLLQAMTHAS 2004

Query: 1618 RPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
              ++ ++ CYQRLEF+GDA LD+LIT+HL+       PG LTDLR+A VNN  FA +AV+
Sbjct: 2005 YHTNRLTDCYQRLEFLGDAALDYLITRHLYEDKRQHCPGDLTDLRSALVNNTIFASLAVR 2064

Query: 1677 HKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLGDCKAPKVLGDIV 1728
            H  H +  H S  L   I  FV+        + EE    G        D + PK LGD+ 
Sbjct: 2065 HGFHKYFCHLSPGLSEVIERFVRIQEENGHAISEECYLIGEEECEEAEDVEVPKALGDVF 2124

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKA 1786
            ES+AGAIFLDSG     VW V+  ++   +      +P  P+REL E   + A+  + + 
Sbjct: 2125 ESVAGAIFLDSGMSLDAVWMVYYHMMKNEIDQFSTNVPKSPIRELLELEPETAKFGKPEK 2184

Query: 1787 SRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
               G      VEV+  G   G+ +N   ++A+  AA+ AL  LK++
Sbjct: 2185 LADGRRVRVNVEVFGKGTYKGIGRN--YRIAKCTAAKCALKQLKKQ 2228



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 178/376 (47%), Gaps = 42/376 (11%)

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFV-------KS 752
            P V  + + +L  +  ++  A++ VE    A +L     +L    P L+ V       K 
Sbjct: 689  PHVPRVNRFILP-EDADNLCALVLVENRFTAKILSHFSNDLKRNDPDLNHVCAQFTVSKI 747

Query: 753  ASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            A  +      E+   + +E + +FR     +LV TS+ E+G+D+ +CN+V+R+++     
Sbjct: 748  ADPVKEPREAEIEHRKQEEVLKRFRMRECNVLVGTSLLEDGIDLPKCNLVVRYNVPTNYR 807

Query: 813  AYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERTDLSHLKDTSR 871
            +Y QS+GRAR P S Y+ +IER N  +  T L      E+ L +    +      +  + 
Sbjct: 808  SYAQSKGRARAPDSHYVHLIERENCDAFITDLAQFMEIEKMLLRRCSNQEPSEDEEREAD 867

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER---HEKP 928
            L +    P    Q   + + V++ ++V  ++ YC++LPSD ++ L P+  + R   +E+ 
Sbjct: 868  LYNDCVTPYKPKQ--DSESSVTMANSVASVNRYCAKLPSDTFTRLTPQATLRRIFFNEQ- 924

Query: 929  GGPTEYSCKLQLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--- 984
                 Y C ++LP N+P ++ + G    +  LA++   + AC+ L+E     D L P   
Sbjct: 925  ---DMYVCTIRLPINSPVKQDIVGHPMPTRVLARRIAAMEACRTLYEARELDDNLQPIGK 981

Query: 985  ------DKG-----SGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDG 1033
                  D       + +  E   Q  + EP PGT + R++Y + +AD L        R+G
Sbjct: 982  ERFQMLDSANAVEVAADPDEPPPQLWDIEPRPGTTKRRQYYYKRIADALND---CRPREG 1038

Query: 1034 CTGSKLFHLFMYTVKC 1049
               + L+HL M T+ C
Sbjct: 1039 -IAAMLYHLDM-TLTC 1052



 Score = 88.6 bits (218), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 12/219 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPKVP 362
           + YQ+++L+ AK +N I  +  G  KT IA+ LI+ + N  ++  +K     V+L     
Sbjct: 17  KEYQVELLDAAKNRNIIVCVGNGPNKTFIALKLIQELSNSSRKSVRKYGQRMVYLTATDT 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           +V Q   V R  T   VG Y          +     + D  QVLVMT++   + ++   +
Sbjct: 77  VVSQMGVVFRNLTDLNVGEYI---------SSEKDLDLDENQVLVMTSEACWDFIQTGQL 127

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             + +NLLI+DECHH+++ HP   VM   +H     +   V G+T+  +   G       
Sbjct: 128 NFKIVNLLIVDECHHSIRDHPMKKVMEACWHVLGNPEM-RVVGLTSPIMPGPGGGEPGRL 186

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
             ++  LE  L     T  D   + ++   P E V+E D
Sbjct: 187 EAEVKRLEHALHCKAETASDIVSVLRYCSKPKETVIECD 225



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP   GY    +Y ++ +YY +KYG  +    QPL+     S   
Sbjct: 1216 FYVAEICNHLNPKSSFP---GY----DYKTFEEYYYKKYGYLIQNWSQPLLDVDHTSARL 1268

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1269 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCMVHPFPASLWRKAVCLP 1326

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+ ++LLA +++  ++
Sbjct: 1327 CILYRINALLLADEIRTTVS 1346


>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
          Length = 1966

 Score =  204 bits (519), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 260/573 (45%), Gaps = 107/573 (18%)

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPA-SKILEALTAASCQETFCYERAELLG 1409
            ++     P      +S L +   + K+ N+P P+ S IL+ALT ++  +    ER E +G
Sbjct: 1384 IKKNSNTPKFTYHFDSNLFSFDFQPKLENHPGPSPSLILQALTMSNANDGINLERLETIG 1443

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SR 1468
            D++LK+ ++ +L+  Y   HEG+L+ +R + VSNL LY+    K L   + A +F P   
Sbjct: 1444 DSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDN 1503

Query: 1469 WAAPGV-LPVFDEDT---KDGDSSLFDQEKSVA----------------EDKLGTDKNYN 1508
            W  P   +P   E         S+L++Q    A                E KLG  KN  
Sbjct: 1504 WLPPCYYVPKELEQALIESGVPSTLWNQADIPALQAVNPFEITQLVRETEQKLGVMKN-- 1561

Query: 1509 EYEDDDMEDGELEGDSSSYRV-----------LSSKTLADVVEALIGVYYVEGGKDAANH 1557
               + D  +  L  +  + R            +  K++AD VEALIG Y +  G   A  
Sbjct: 1562 ---ELDRNETTLPNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALL 1618

Query: 1558 LMKWIGIQV----------ESDPEEVGCPSRPACV------------------------- 1582
             M W+GI V          E++P++    S P                            
Sbjct: 1619 FMAWLGIHVLPTEEISIIQETEPKDRIPGSTPYVKGKNEKGQTIWTQIRYGKLEEPQNPL 1678

Query: 1583 ------PESVLRSV--DFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVG 1633
                  PE  L+ +   +  LE  +  KF D   L++A THAS +P+    CYQRLEF+G
Sbjct: 1679 LRYIVDPEEELKLMLDGYEELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLG 1738

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AV+   H + RH S  L   
Sbjct: 1739 DAVLDYLITRHLYEDARQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIV 1798

Query: 1694 IRDFVK-------EVLEELLKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            I  FV+        + EE    G        D + PK LGD+ ES+AGAI+LDSG     
Sbjct: 1799 INRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDA 1858

Query: 1746 VWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLA-------TVE 1796
            VW V+  ++   +      +P  P+REL E   + A     K  +   LA       TV+
Sbjct: 1859 VWSVYYTIMKNEIEQFSTNVPKSPIRELLELEPETA-----KFGKPEKLADGRRVRVTVD 1913

Query: 1797 VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            V+  G   G+ +N   ++A+  AA+ AL  +KE
Sbjct: 1914 VFGKGSFKGIGRN--YRIAKCTAAKCALKKIKE 1944



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 25/321 (7%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            +IFV++   A VL  +  E+           P  +  K+   I ++   E+   + +E +
Sbjct: 440  VIFVDKAFVAKVLFYLLNEISIHDEELHFLSPLYTIEKNIDDISYSKDLEIEHRKQEEVL 499

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     +L++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR P + Y+L++ 
Sbjct: 500  KRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAPDALYVLLVS 559

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +  +   L      E+TL  +          ++ + + +   +P            V
Sbjct: 560  QEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAA-MIPHYKPLDGGDAPKV 618

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
            + NSA+ L++ YC++LPSD ++ L PE+ ++          Y C L+LP N+P + +   
Sbjct: 619  TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNI-DNILMYICSLRLPINSPVKYIVSS 677

Query: 953  V-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-----G 1001
                +  +A++   L  C  LH      D LLP      K   E  E     DE      
Sbjct: 678  YPMPNKAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVDFS 737

Query: 1002 EPLPGTARHREFYPEGVADIL 1022
            E  PGT + R++Y +  A+ L
Sbjct: 738  EARPGTTKRRQYYYKKTAEAL 758



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       Y ++ +YY +KY +++    QPL+     S   
Sbjct: 944  FYVAEICTNLNPKSSFPGND-------YGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARL 996

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 997  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1054

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1055 CILYRINALLLANQIRCQV 1073



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/314 (20%), Positives = 125/314 (39%), Gaps = 35/314 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
           R YQ+++   AK K+ I  L     +T + + LI+    +    N+++L+      ++++
Sbjct: 17  REYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATN----NRRLLSEGGKRSLYIL 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                   +A  I++ T   +      +  D      +  +F+   VL+ T++    +L 
Sbjct: 73  TDEEKCIVKASYIQQLTDLKI------LLCDTCSTAEFIEKFEISHVLLTTSKTCAQLLT 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              I    INL+I+DECH ++       ++     T        + G+     NL     
Sbjct: 127 DKKILPHQINLVIVDECHKSINNSQLKFIL----QTILSCNNVRIIGLAVPLFNLTQEPG 182

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
           ++   ++I  +E+     V T  D   + ++ P P E VVEY K+           ++ +
Sbjct: 183 RL--GLEIEKVENTFHCEVETASDILSILRYSPKPKEYVVEYAKSEK--------GELHI 232

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
            +E     +    +       +   +E    +  + + TE      ++Q L  I   L  
Sbjct: 233 IIENHILHAIEFLRDHRYDPTEIYNEEFYEDIQKIPDPTEK--PFEMMQDLLHI---LET 287

Query: 599 LGQWCAYKVAQSFL 612
           LG WCA + A + L
Sbjct: 288 LGPWCADRAAFALL 301


>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1524

 Score =  204 bits (518), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 201/747 (26%), Positives = 336/747 (44%), Gaps = 127/747 (17%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           +R YQ ++L ++  +N +  ++TG+GKT IAVL I+    + +R++KK ++ F+ P V L
Sbjct: 18  SRSYQREMLAESLHRNIVIAMDTGSGKTHIAVLRIKY---ESERESKK-VSWFVAPTVAL 73

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQ EV+       VG   G +  D W DA+ WQR  +T +V+V T Q+LL+ +RH  +
Sbjct: 74  CEQQREVLATALPVSVGIISGSLEPDQWKDARIWQRVIETNRVIVSTPQVLLDAMRHGYV 133

Query: 423 KM-EAINLLILDECHHAVKKHPYSLVMSEFY---------------HTTSKEKRPSVFGM 466
            M + INLLI DE HHA  KHPY+L+M EFY               +++   +RP + G+
Sbjct: 134 DMGQHINLLIFDEAHHAADKHPYNLIMKEFYFRLPPRGTGETPLSANSSINRERPMILGL 193

Query: 467 TASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHV----------PMPSE 515
           TASP         ++ A  I  +E+ LDS +   +  R+EL  HV          P+P+E
Sbjct: 194 TASP----SFGGNLEKAFAI--IEANLDSTIRAPRIFREELAAHVHRPTFKHVLYPLPTE 247

Query: 516 VVVEYDKAAS--LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV 573
              +Y + +S    +L+  +  +++  +    S  ++ +    G       ++L +    
Sbjct: 248 ---DYGRPSSRNAQALNAVVASLDIGQDPYVISLRQQLQRALPGPERNRIDQKLSKTIQK 304

Query: 574 SERTESDGAANLIQKLRAINYALGEL-GQWCAYKVAQSFLTALQNDERANYQLDVKFQES 632
            +     G     +    I Y LG     W   KV       ++  + +    +     S
Sbjct: 305 KDSYSHKGLREFARAALDICYDLGPWPADWYVRKV-------IERAQASGESFNTTGMSS 357

Query: 633 YLSKVVSLLQCELVE--GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVD 690
           + ++     +  L+E  G V+  D   +D E   V G +                 E V+
Sbjct: 358 WHNRWRGTEKTYLLELLGRVNLDDPVDLDDEATLVNGCS-----------------EKVN 400

Query: 691 VIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSF 749
           ++I + +++           K+  +  H E F  ++FV R  + L L ++ +  P +   
Sbjct: 401 LLISSLLSE-----------KLAAEEDH-ELFTGLVFVTRRDSVLALAEILSRHPRTRGA 448

Query: 750 VKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQC 799
            K   L+G ++S + R F             ET+   + G   L+++T+VAEEG+DI+ C
Sbjct: 449 FKVGCLLGSSDSVKRRAFLDITRELLVQSQTETLEDLKIGEKNLIISTAVAEEGIDIQAC 508

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
             V R+D    ++++ QSRGRARK  S + LM +    +HA  +          + E +E
Sbjct: 509 GAVFRWDPPPNMVSWAQSRGRARKKKSTFTLMFDDSG-AHAKMVE---------QWERLE 558

Query: 860 RTDLSHLKDTSR-----------LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL 908
           R  ++   D SR            I VD V    ++V STGA+++L SAV  ++ +C+ +
Sbjct: 559 REMMNMYYDPSRDMREPEDGMGEHIGVDEV--LEFKVPSTGALLTLQSAVTHLNHFCACI 616

Query: 909 PSDR----YSILRPEFIMERHEKPGGPTEYS----CKLQLPCNAPFEKLE---GPVCSSM 957
           P  +    Y I  P+     H      T Y     C + LP   P    E   G   +S 
Sbjct: 617 PGGQHAPIYDIDPPDLPEGWHATQTTFTPYQGPWGCVVILPRLLPRHLREFRVGREYTSK 676

Query: 958 RLAQQAVCLAACKKLHEMGAFTDMLLP 984
             A+      A + L+E G   D LLP
Sbjct: 677 ASARNHAAFFAYRSLYEAGLLNDHLLP 703



 Score =  157 bits (398), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 161/567 (28%), Positives = 250/567 (44%), Gaps = 112/567 (19%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYP-----VPASKILEALTAASCQETFCYERAELLGDAY 1412
            LPSI+RR+   + A  L++ +        +P   +  A+TA    E   Y+R E LGD  
Sbjct: 981  LPSILRRLTVTMTAASLREMLFLSPRLRSIPLDLLTAAITAPVSGEIRNYQRLETLGDTA 1040

Query: 1413 LKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP 1472
            LK++ S  L   YP  HEG L++ +   V+N+ L + ALSK L  ++  DRF   +W   
Sbjct: 1041 LKFMASISLLTDYPLWHEGYLSKKKDHAVANVRLAKIALSKELYRWMIRDRFIVKKWRP- 1099

Query: 1473 GVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE-DDDMEDGELEGDSSSYRVLS 1531
                            L + +KS      G +K   E E D + E G  +        LS
Sbjct: 1100 ---------------KLAEWQKSS-----GDEKKMPESEVDTNAEKGRGQPQ------LS 1133

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLR--- 1588
             K LAD+VEA+IG  Y+ G  D A  + +   I ++     +  P  P C+   ++R   
Sbjct: 1134 MKMLADIVEAIIGAAYLHGSFDLAVEVTRLFDIGID-----IKTP--PTCIERILVRAQA 1186

Query: 1589 SVD--------FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDH 1639
            SVD           +E  L   F ++ LLVEA+THAS + + G   Y+R+EF+GDAVLD 
Sbjct: 1187 SVDDLREIPSQIDVVERMLGYSFNNKVLLVEALTHASLQGTEGTISYERMEFLGDAVLDM 1246

Query: 1640 LITKHLFF-SYTNLPPGRL---------------------TDLRAAAVNNENFARVAVK- 1676
            ++T +L+  S  N  PG +                     T+L AA  +++     +++ 
Sbjct: 1247 VVTDYLYRRSDKNYGPGHMHLRKQAVVNMHFLAYVCFGISTELEAAMGSSDGVGNTSIRN 1306

Query: 1677 ------------HKLHVHLRHGSSALDRQIRD---FVKEVLEELLKPGFNSFGLGDCKAP 1721
                        H  H  L   S+A  R  R+   F +    + L P      L   +AP
Sbjct: 1307 SSQRVYLWQCLLHSSHRILDDQSNAFTRYQRNRKAFDRAFQHDTLFPWT---ALTQLQAP 1363

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVRELQERCQ 1776
            K L D+VES  GA+FLDSG    V+  + +     P L+ +V  +    HPV  L     
Sbjct: 1364 KALSDVVESTIGAVFLDSGGSFEVIQNLLRRYRILPTLERIVDCDVDVQHPVSRLSIWAA 1423

Query: 1777 QQAEGLEYKASRSGNLATVEVYID---GVQVG------VAQNPQKKMAQKLAAR-----N 1822
            ++ + ++Y   ++    +  +YID    V+V       ++Q   K MA + A R     +
Sbjct: 1424 KEKKKVKYDFDKADGRISCAIYIDEQEEVRVTEPYRGRISQAEVKFMAAEQAIRKFRVIS 1483

Query: 1823 ALAVLKEKETAEAKEKGDENGKKRKNG 1849
            A ++L E E      +GDE     + G
Sbjct: 1484 ADSMLWEMEGVGHDNEGDEEESNDEEG 1510


>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Coniophora puteana RWD-64-598 SS2]
          Length = 1534

 Score =  203 bits (517), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 208/765 (27%), Positives = 341/765 (44%), Gaps = 163/765 (21%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++   + ++N I   +TG+GKTLIA+L ++   ++++R+ +K+   F  P V L 
Sbjct: 34  RDYQLEMFTASLRENIIVAQDTGSGKTLIAILRMK---HEVEREPRKV-CWFFAPTVALC 89

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            QQ +VI       VG   G +  + W D   W+      +++V T Q+LL+ LRH  +K
Sbjct: 90  EQQRDVIALDIPVSVGLISGALEPNQWKDIALWRGVLQRHRIIVSTPQVLLDALRHGYVK 149

Query: 424 M-EAINLLILDECHHAVKKHPYSLVMSEFYHTT------------SKEKRPSVFGMTASP 470
           + E I LL+ DE HHAV  HPY+ +M EFY               S+E+RP V G+TASP
Sbjct: 150 LGEDIGLLVFDEAHHAVDNHPYNCIMKEFYFRVAVREHGAASGAESREERPMVLGLTASP 209

Query: 471 V-------NLKGVSSQVDCAIKICNLE-SKLDSVVCTIKDRKELEKHV---PMPSEVVVE 519
           V       +++ +   +DC ++   L  S+L S V      + + KHV   P P      
Sbjct: 210 VYGGNVEASMRILERNLDCIVRSPRLHRSQLISFV-----HRPIFKHVLYRPAPF----- 259

Query: 520 YDK---AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSER 576
           +DK   A+++ +L   L  +   V++     S R +   +  +  G+ + +R    +S+ 
Sbjct: 260 FDKTYTASNITALSSVLATLN--VKDDPYIISLRGQ---LAHKTPGSPDYMRTDQKLSKT 314

Query: 577 TESD------GAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
            + +      G  +++     I +   +LG+W A                          
Sbjct: 315 IKKEDTYTHRGLKDIVSTATEICF---DLGRWAA-------------------------- 345

Query: 631 ESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHV---VSGGE 687
           + Y+ K +SL +               +  E+ F      E E+  LL       VS   
Sbjct: 346 DWYVHKAISLAR------------ENPMPYESAFT--SVQEKEKAYLLRILARVHVSPPS 391

Query: 688 HVDVIIGAAVADGKVTPKVQSLIKILL------KYQHTEDFRAIIFVERVVAALVLPKVF 741
           +    I A V+D     K+  LI  LL      + +  E +  ++FV R  A L L +V 
Sbjct: 392 YDPAAIEAGVSD-----KLCVLIDTLLAEKRGAEEEANEAYSGLVFVTRRDAVLSLAEVL 446

Query: 742 AELP-SLSFVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVA 790
           A  P +   ++   ++G + S   +T              ET+  FR G   +LVATSVA
Sbjct: 447 AVHPRTAGVLRVGRIVGTSESAYRKTLLDVTRALMRNTHGETLGSFRTGEFNVLVATSVA 506

Query: 791 EEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE 850
           EEGLDI+ C  V+R+D+   ++++ QSRGRAR+  S ++LM E GN+  A   R  +   
Sbjct: 507 EEGLDIQACCNVVRWDVPNNMVSWAQSRGRARRWRSTFVLMFESGNMDAAGVERWMQ--- 563

Query: 851 ETLRKEAIERTDLSHLKDTSRLISVDAVP---------------GTVYQVESTGAVVSLN 895
                  +ER  +    +  RL   +A+P                  + VESTGA+++L 
Sbjct: 564 -------LERQMVEQYNNQMRLAG-NALPRYDEEDDEDQEDDDHAVRFTVESTGALLTLQ 615

Query: 896 SAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG-------------PTEYSCKLQLPC 942
           SA   ++ +CS LP+ R++  R  + ++  E P G             P  + C + LP 
Sbjct: 616 SAPPHLNHFCSVLPNSRHTAHRALYDIDPPEFPEGWHALDPRTNTLPYPGPFGCTVTLPR 675

Query: 943 NAP--FEKLEGPVCSSMRL-AQQAVCLAACKKLHEMGAFTDMLLP 984
             P        P   S +L A++ V   A K L++ G   + L+P
Sbjct: 676 VLPPLLRTFSVPQKYSSKLSARRHVSFKAYKTLYDAGLLNEHLMP 720



 Score =  159 bits (402), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 169/565 (29%), Positives = 247/565 (43%), Gaps = 114/565 (20%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVE-----SMLLAIQLKDKINYPVPASKILEA 1390
             L PE  F+  +       A  +PSI+R +      + L A  L D     +P S +  A
Sbjct: 982  LLIPEYSFVELVSPVEAEFALLVPSILRYISVANTAASLRATLLTDPQLAEIPLSLVKMA 1041

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            ++A   QE   Y+R E LGDA LK VV  +L+ ++P  HEG LT+ R   VSN+ L + A
Sbjct: 1042 ISAPVSQEPTNYQRLESLGDAVLKLVVGAYLYSEHPLWHEGYLTQRRDHAVSNVRLAKSA 1101

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
            + K L  +I  D FAP R+     +P +  D +                        NE 
Sbjct: 1102 IQKKLYRWIVRDHFAPKRF-----MPRYLTDNRGAT---------------------NEE 1135

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            E+ D E+G  +G       LS+K LADVVE+LIG  YV GG + A  L++ I + +   P
Sbjct: 1136 ENSD-ENGNGKGKED----LSTKVLADVVESLIGAAYVHGGFELAISLIRTIDVHLALSP 1190

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS-GVSCYQRL 1629
                  +  A    S+        +++ +   F    LLVEA+THAS  +      Y+RL
Sbjct: 1191 LSASIEAAYAAADPSLEAPPQVAHVQNMIGYTFTKPLLLVEALTHASHQTDLRTVSYERL 1250

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF------------------- 1670
            EF+GDAVLD LI  +L+    N  PG +T LR  A+ N  F                   
Sbjct: 1251 EFLGDAVLDMLIADYLYKHPKNFSPGEIT-LRKHAIGNALFLSYACLSSCTPVDASVPAP 1309

Query: 1671 -----ARVAVKHKL-HVHLR----HGSSA-LDRQIRDFVKEVLEELLKPGFNSFG----- 1714
                  ++ ++ K  H++L     H SSA LD Q   F +     +  P   S       
Sbjct: 1310 DPLRHGKITLRAKTEHIYLYQCMLHSSSALLDEQKGAFAR--FASVGGPLARSLSHSSVF 1367

Query: 1715 ----LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVV---------WQVFQPLLDPMVTPE 1761
                L   +APK+L DIVES+ GA+++D+  D   V         W + + + D  V  E
Sbjct: 1368 PWAELTRLQAPKILSDIVESVIGAVYIDARGDVVAVRGVLGRMGMWTMLERVSDGDVEVE 1427

Query: 1762 TLPMHPVRELQERC-QQQAEG---------LEYKASRSGNLATVEVYIDGV-QVGV---- 1806
                HPV  L     Q++ E           EY+  R   + TV   ++GV ++G     
Sbjct: 1428 ----HPVSTLHRWASQRKTEAGEPAPRKVVYEYEVERGKVVCTVR--LEGVEELGSVAAE 1481

Query: 1807 -----AQNPQKKMAQKLAARNALAV 1826
                 + N ++  A+ LAA  AL V
Sbjct: 1482 CEKRGSANARRNEAKYLAANKALRV 1506


>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
          Length = 1952

 Score =  203 bits (517), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 177/572 (30%), Positives = 259/572 (45%), Gaps = 107/572 (18%)

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPA-SKILEALTAASCQETFCYERAELLG 1409
            ++     P      +S L +   + K+ N+P P+ S IL+ALT ++  +    ER E +G
Sbjct: 1383 IKKNSNTPKFTYHFDSNLFSFDFQPKLENHPGPSPSLILQALTMSNANDGINLERLETIG 1442

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SR 1468
            D++LK+ ++ +L+  Y   HEG+L+ +R + VSNL LY+    K L   + A +F P   
Sbjct: 1443 DSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDN 1502

Query: 1469 WAAPGV-LPVFDEDT---KDGDSSLFDQEKSVA----------------EDKLGTDKNYN 1508
            W  P   +P   E         S+L++Q    A                E KLG  KN  
Sbjct: 1503 WLPPCYYVPKELEQALIESGVPSTLWNQADIPALQAVNPFEITQLVRETEQKLGVMKN-- 1560

Query: 1509 EYEDDDMEDGELEGDSSSYRV-----------LSSKTLADVVEALIGVYYVEGGKDAANH 1557
               + D  +  L  +  + R            +  K++AD VEALIG Y +  G   A  
Sbjct: 1561 ---ELDRNETTLPNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALL 1617

Query: 1558 LMKWIGIQV----------ESDPEEVGCPSRPACV------------------------- 1582
             M W+GI V          E++P++    S P                            
Sbjct: 1618 FMAWLGIHVLPTEEINIIQETEPKDRIPGSTPFVKGKNEKGETIWTQIRYGKLEEPQNPL 1677

Query: 1583 ------PESVLRSV--DFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVG 1633
                  PE  L+ +   +  LE  +  KF D   L++A THAS +P+    CYQRLEF+G
Sbjct: 1678 LRYIVDPEEELKLMLDGYEELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLG 1737

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AV+   H + RH S  L   
Sbjct: 1738 DAVLDYLITRHLYEDTRQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIV 1797

Query: 1694 IRDFVK-------EVLEELLKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            I  FV+        + EE    G        D + PK LGD+ ES+AGAI+LDSG     
Sbjct: 1798 INRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDA 1857

Query: 1746 VWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLA-------TVE 1796
            VW V+  ++   +      +P  P+REL E   + A     K  +   LA       TV+
Sbjct: 1858 VWSVYYAIMKNEIEQFSTNVPKSPIRELLELEPETA-----KFGKPEKLADGRRVRVTVD 1912

Query: 1797 VYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            V+  G   G+ +N   ++A+  AA+ AL  LK
Sbjct: 1913 VFGKGSFKGIGRN--YRIAKCTAAKCALKKLK 1942



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 25/321 (7%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            +IFV++   A VL  +  E+           P  +  K+   I ++   E+   + +E +
Sbjct: 440  VIFVDKAFVAKVLFYLLNEISMHDEELHFLSPLYTIEKNIDDISYSKDLEIEHRKQEEVL 499

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     +L++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR P + Y+L++ 
Sbjct: 500  KRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAPDALYVLLVS 559

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +  +   L      E+TL  +          ++ + + +   +P            V
Sbjct: 560  QEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAA-MIPHYKPLDGGDAPKV 618

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
            + NSA+ L++ YC++LPSD ++ L PE+ ++          Y C L+LP N+P + +   
Sbjct: 619  TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNI-DNILMYICSLRLPINSPVKYIVSS 677

Query: 953  V-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-----G 1001
                +  +A++   L  C  LH      D LLP      K   E  E     DE      
Sbjct: 678  YPMPNKAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVDFS 737

Query: 1002 EPLPGTARHREFYPEGVADIL 1022
            E  PGT + R++Y +  A+ L
Sbjct: 738  EARPGTTKRRQYYYKKTAEAL 758



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       Y ++ +YY +KY +++    QPL+     S   
Sbjct: 944  FYVAEICTNLNPKSSFPGND-------YGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARL 996

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 997  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1054

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1055 CILYRINALLLANQIRCQV 1073



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 126/314 (40%), Gaps = 34/314 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
           R YQ+++   AK K+ I  L     +T + + LI+    +    N+++L+      ++++
Sbjct: 17  REYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATN----NRRLLSQGGKRSLYIL 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                   +A  I++ T   V      +  D      +  +F+   VL+ T++    +L 
Sbjct: 73  TDEDKCTIKASYIQQLTDLKV------LLCDTCSTAEFIEKFEISHVLLATSKTCAQLLA 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              I    INL+I+DECH ++       ++       S    P + G+     NL     
Sbjct: 127 DKKILPHQINLVIVDECHKSINNSQLKFILQTI---LSCNNVPRIIGLAVPLFNLTQEPG 183

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
           ++   ++I  +E+     V T  D   + ++ P P E VVEY K+           ++ +
Sbjct: 184 RL--GLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKSEK--------GELHI 233

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
            +E     +    +       +   +E    +  + + TE      ++Q L  I   L  
Sbjct: 234 TIENHILHAIEFLRDHRYDPTEIYNEEFYEDIQKIPDPTEK--PFEMMQDLLHI---LET 288

Query: 599 LGQWCAYKVAQSFL 612
           LG WCA + A + L
Sbjct: 289 LGPWCADRAAFALL 302


>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
 gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
          Length = 1731

 Score =  203 bits (516), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 186/720 (25%), Positives = 315/720 (43%), Gaps = 93/720 (12%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLV 358
           E Q R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   K    A+F+ 
Sbjct: 15  EIQPRSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIAKGGKRALFMC 74

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++ 
Sbjct: 75  NTVELARQQAVSVRRNTNFKVGFYVGEQGVDEWTRGKWSEEIENNQVLVGTAQVFLDMVT 134

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              + + +I+++I+DECHH  + HP+   M   +    +   P V G+T   V +KG + 
Sbjct: 135 QKNMALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTG--VLIKG-NE 190

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE---- 531
               A K+  LE      + T+   KE+E    +   P+EV+V +       ++      
Sbjct: 191 ITKVATKLKELEITYRGNIITVSGSKEIENVMLYATKPTEVMVSFPHQEQGPTVARFIIA 250

Query: 532 QLKQMEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
           Q+KQ  V++E         RRSK      RD+  K  ++Q++                  
Sbjct: 251 QIKQFFVSLELMNIGVQPVRRSK-SLHSPRDSSKKGFVKQLFN----------------- 292

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
               Y L E G + A     S +       R    L VK     L    +L  CE +   
Sbjct: 293 -DFVYQLEEYGIYAASIAIISLIVEFDLKRRQAETLSVK-----LMHRTALTLCERIRHL 346

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
           + +K   + D ++G  +    E                  ++I+  +      TPK+Q  
Sbjct: 347 LVQKLRDMTDDDDGPDDDVNTE------------------NIIMNFS------TPKIQRF 382

Query: 710 ---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
              +K+   Y+  +D   ++FVER      +  L+L  + +  P L  V +   +   NS
Sbjct: 383 LMSLKVSFAYKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRNVLTPQFMVGRNS 441

Query: 762 ------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                   +     +  I KFR+G   L++ +SV EEG+D++ CN VI  D  KT   Y+
Sbjct: 442 ISPDFGNVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVIILDHLKTFNMYV 501

Query: 816 QSRGRARKPGSDYILM-IERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSR 871
           Q++GRAR P + +++   ER            RNA +      KE +    +  L +  +
Sbjct: 502 QTKGRARSPEAKFVVFTTERDREKTCQQICQYRNAHDEIAEYLKERVLEQAMPELYEIEK 561

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM----ERHEK 927
                  P T       GAV+  ++A+ L+H YC ++P+D +  + P   +    ER++ 
Sbjct: 562 HFQDVIKPYT----NEYGAVLLPSNALTLLHRYCQKIPTDAFGFVIPWINLLEEGERNKL 617

Query: 928 PG--GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            G     ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 618 FGVNAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 677



 Score =  155 bits (391), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 223/479 (46%), Gaps = 93/479 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1200 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1259

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDG----- 1485
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  +       
Sbjct: 1260 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWREKPEFANMIGP 1316

Query: 1486 ----DSSLFDQEKSVAEDKLGTDKNYNEY------EDDDMEDGELEGDSSSYRV----LS 1531
                D +L D+E  V  +   +D  YN +            DG       +Y V    ++
Sbjct: 1317 HNLRDLALDDEESLVKGN--CSDIKYNCFVAGCRANAGSFYDGSDFSSEVNYCVGQVTIA 1374

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACV 1582
            +K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A V
Sbjct: 1375 NKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANV 1433

Query: 1583 PESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD 
Sbjct: 1434 NTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDF 1493

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV 
Sbjct: 1494 LISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1553

Query: 1700 --------------------EVL-------EELLKPGFN---------------SFGLG- 1716
                                +VL       +EL  P  N                F +  
Sbjct: 1554 FQESQGHRVTNYVHILLEEADVLPTPLDLDDELELPHANECISQEAEQGVPPKGEFNMST 1613

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W V   L +P +   T  +P++P+R+L E
Sbjct: 1614 NVDVPKTLGDVLEALIAAIYLDC-RDLRRTWDVIFRLFEPELQEFTRNVPINPIRQLIE 1671



 Score = 43.9 bits (102), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 888  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 941

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 942  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 994

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 995  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1025


>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
          Length = 1952

 Score =  203 bits (516), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 174/544 (31%), Positives = 258/544 (47%), Gaps = 100/544 (18%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R
Sbjct: 1411 NHPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLR 1470

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDT--KDG-DSSLFDQ 1492
             + VSNL LY+    K L   + A +F P   W  P   +P   E    K G  S+L++Q
Sbjct: 1471 SKQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIKSGIPSTLWNQ 1530

Query: 1493 E-----KSV-----------AEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV----- 1529
                  ++V            E KLG  K       D++   E  L  +  + R      
Sbjct: 1531 ADIPTLQAVNPNEITQLVRETEQKLGIMK-------DELVRNEAILSNNLDNLRCFIPYN 1583

Query: 1530 ------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEV 1573
                  +  K++AD VEALIG Y +  G   A   M W+GI V          E++PEE 
Sbjct: 1584 LITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPMEEICIVQETEPEER 1643

Query: 1574 GCPSRPAC-----------------------------VP---ESVLRSVD-FHALEDALK 1600
               S P                               +P   + +L  +D +  LE  + 
Sbjct: 1644 IPGSTPYVKGTNDQGEVTWIQIRYGKLEEPQNPLLRYIPNPEQELLMMLDGYEELEKNIG 1703

Query: 1601 IKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
             KF D   L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTD
Sbjct: 1704 YKFNDISYLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTD 1763

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG--- 1716
            LR+A VNN  FA +AV+   H + RH S  L   I  FV+   E         + +G   
Sbjct: 1764 LRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEK 1823

Query: 1717 -----DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVR 1769
                 D + PK LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+R
Sbjct: 1824 CEEAEDVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYVIMKNEIEQFSTNVPKSPIR 1883

Query: 1770 ELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            EL E   + A+  + +    G+    TV+V+  G   G+ +N   ++A+  AA+ AL  L
Sbjct: 1884 ELLELEPETAKFGKPEKLADGHRVRVTVDVFGKGSFKGIGRN--YRIAKCTAAKCALKKL 1941

Query: 1828 KEKE 1831
            K+ +
Sbjct: 1942 KQMQ 1945



 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 183/813 (22%), Positives = 313/813 (38%), Gaps = 130/813 (15%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ----NKKMLAVFLVPK 360
            R YQ+++   A+ KN I  L     +T I + LI+    + +R      K+ L +    +
Sbjct: 17   REYQVELFYAARDKNIIVCLGKSYEQTFIVIKLIQEFAANNRRPLSEGGKRSLYILTDEE 76

Query: 361  VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
              ++  +A  I++ T   V  Y      +F D      +F+T  VLV+T+++   +L   
Sbjct: 77   KCII--KASYIQQLTDLKVLMYTACSSNEFVD------KFETSHVLVLTSEVCTKLLAEK 128

Query: 421  IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
             I    INL+I+DECH  +  +    ++  F   T     P + G+     NL     ++
Sbjct: 129  KILPHQINLVIVDECHKFINDNKLKFILQTFLSCTD---VPRIIGLAVPLFNLTQEPGRL 185

Query: 481  DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
               ++I  +E+     V T  D   + ++ P   E +VEY        LH  +K   +  
Sbjct: 186  --GLEIEKVETTFQCEVETASDILSILRYSPKAKEYIVEYCNGEK-GELHITIKNYILHA 242

Query: 541  EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
             E            F+        E   + +    +   D      + ++   + L  LG
Sbjct: 243  IE------------FLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLHVLETLG 290

Query: 601  QWCAYKVAQSFLTALQNDERANYQLDVKFQESYL-------------------------- 634
             WCA + A + L   +       ++   ++  YL                          
Sbjct: 291  PWCADRAALALLILTE-----KLKIKTPYERHYLLLNMVASVFMKIRALCDNAFEILSDK 345

Query: 635  --------SKVVSLLQCELVEGAVSKKDAKVVDSE-NG-------------------FVE 666
                     KV  LLQ          KD K  DS+ NG                   F+ 
Sbjct: 346  ERIYKYTTPKVHRLLQVLKTYTPYYNKDVKNSDSKINGENSSQKLHVNNRENYIRDKFIH 405

Query: 667  G--GTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ-HTEDFR 723
            G  G  E ++        + G    D++ G    D     KV  L  +L +   H ED  
Sbjct: 406  GRKGNEENDKRPFKFQRHMRGATDPDLLCGVIFVDKGFVAKV--LFYLLNEISAHDEDLE 463

Query: 724  AIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTL 783
             +                   P  +  ++   + ++   E+   + +E + KFR     L
Sbjct: 464  FLS------------------PLYTIERNTDDVSYSKDLEIEHKKQEEVLKKFRIHECNL 505

Query: 784  LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATF- 842
            L++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR   + ++L++ +       + 
Sbjct: 506  LISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAIDALHVLLVPKETSKECIWQ 565

Query: 843  LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIH 902
            L      E+TL  +          ++ + + +   +P      E     V+ NSA+ L++
Sbjct: 566  LAQYHYIEKTLLIKCSNNEPSEEEENEADMYAA-MIPHYKPLSEDDAPKVTFNSAISLVN 624

Query: 903  FYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMR-LAQ 961
             YC++LPSD ++ L PE+ +E+      P  Y C L+LP N+P +          R +A+
Sbjct: 625  RYCAKLPSDTFTRLTPEWSIEQINSDNMPM-YVCSLRLPINSPVKYAVSSYPMPNRAMAR 683

Query: 962  QAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-----GEPLPGTARHR 1011
            +   L  C  LH      D LLP      K   E  E     DE      E  PGT + R
Sbjct: 684  RMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDEIKVDFSEARPGTTKRR 743

Query: 1012 EFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
            ++Y +  A+ L     + G      S L+H+ M
Sbjct: 744  QYYYKKTANALTDCRPIVG----APSYLYHINM 772



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       YS++ +YY +KY +++    QPL+     S   
Sbjct: 940  FYVAEICTNLNPKSSFPGDD-------YSTFEEYYFKKYEIQIQNLDQPLLDVDHTSARL 992

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 993  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1050

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1051 CILYRINALLLANQIRCQV 1069


>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
          Length = 1946

 Score =  202 bits (514), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 176/572 (30%), Positives = 259/572 (45%), Gaps = 107/572 (18%)

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPA-SKILEALTAASCQETFCYERAELLG 1409
            ++     P      +S L +   + K+ N+P P+ S IL+ALT ++  +    ER E +G
Sbjct: 1383 IKKNSNTPKFTYHFDSNLFSFDFQPKLENHPGPSPSLILQALTMSNANDGINLERLETIG 1442

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SR 1468
            D++LK+ ++ +L+  Y   HEG+L+ +R + VSNL LY+    K L   + A +F P   
Sbjct: 1443 DSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLGRQKMLGESMIATKFEPHDN 1502

Query: 1469 WAAPGV-LPVFDEDT---KDGDSSLFDQEKSVA----------------EDKLGTDKNYN 1508
            W  P   +P   E         S+L++Q    A                E KLG  KN  
Sbjct: 1503 WLPPCYYVPKELEQALIESGVPSTLWNQADIPALQAVNPFEITQLVRETEQKLGVMKN-- 1560

Query: 1509 EYEDDDMEDGELEGDSSSYRV-----------LSSKTLADVVEALIGVYYVEGGKDAANH 1557
               + D  +  L  +  + R            +  K++AD VEALIG Y +  G   A  
Sbjct: 1561 ---ELDRNETTLPNNLDNMRCFIPYNLITQHSIPDKSIADCVEALIGAYLIACGPRGALL 1617

Query: 1558 LMKWIGIQV----------ESDPEEVGCPSRPACV------------------------- 1582
             M W+GI V          E++P++    S P                            
Sbjct: 1618 FMAWLGIHVLPTEEINIIQETEPKDRIPGSTPFVKGKNEKGETIWTQIRYGKLEEPQNPL 1677

Query: 1583 ------PESVLRSV--DFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVG 1633
                  PE  L+ +   +  LE  +  KF D   L++A THAS +P+    CYQRLEF+G
Sbjct: 1678 LRYIVDPEEELKLMLDGYEELEKNIGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLG 1737

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DAVLD+LIT+HL+       PG LTDLR+A VNN  FA +AV+   H + RH S  L   
Sbjct: 1738 DAVLDYLITRHLYEDTRQHSPGALTDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIV 1797

Query: 1694 IRDFVKEVLEELLKPGFNSFGLG--------DCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            I  FV+   E     G   + +G        D + PK LGD+ ES+AGAI+L SG     
Sbjct: 1798 INRFVRIQEENGHSIGEEYYLIGEEECEEAEDVEVPKALGDVFESLAGAIYLGSGMSLDA 1857

Query: 1746 VWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNLA-------TVE 1796
            VW V+  ++   +      +P  P+REL E   + A     K  +   LA       TV+
Sbjct: 1858 VWSVYYAIMKNEIEQFSTNVPKSPIRELLELEPETA-----KFGKPEKLADGRRVRVTVD 1912

Query: 1797 VYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            V+  G   G+ +N   ++A+  AA+ AL  LK
Sbjct: 1913 VFGKGSFKGIGRN--YRIAKCTAAKCALKKLK 1942



 Score =  114 bits (286), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 149/321 (46%), Gaps = 25/321 (7%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            +IFV++   A VL  +  E+           P  +  K+   I ++   E+   + +E +
Sbjct: 440  VIFVDKAFVAKVLFYLLNEISMHDEELHFLSPLYTIEKNIDDISYSKDLEIEHRKQEEVL 499

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     +L++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR P + Y+L++ 
Sbjct: 500  KRFRIHECNILISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARAPDALYVLLVS 559

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +  +   L      E+TL  +          ++ + + +   +P            V
Sbjct: 560  QEMSKEYVWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAA-MIPHYKPLDGGDAPKV 618

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
            + NSA+ L++ YC++LPSD ++ L PE+ ++          Y C L+LP N+P + +   
Sbjct: 619  TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMNI-DNILMYICSLRLPINSPVKYIVSS 677

Query: 953  V-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-----G 1001
                +  +A++   L  C  LH      D LLP      K   E  E     DE      
Sbjct: 678  YPMPNKAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVDFS 737

Query: 1002 EPLPGTARHREFYPEGVADIL 1022
            E  PGT + R++Y +  A+ L
Sbjct: 738  EARPGTTKRRQYYYKKTAEAL 758



 Score = 68.6 bits (166), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       Y ++ +YY +KY +++    QPL+     S   
Sbjct: 944  FYVAEICTNLNPKSSFPGND-------YGTFEEYYLKKYDIQIQNLDQPLLDVDHTSARL 996

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 997  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1054

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1055 CILYRINALLLANQIRCQV 1073



 Score = 54.7 bits (130), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/311 (21%), Positives = 125/311 (40%), Gaps = 28/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLVPKV 361
           R YQ+++   AK K+ I  L     +T + + LI+    + +R   Q  K  +++++   
Sbjct: 17  REYQVELFYAAKDKDIIVCLGKNYEQTFLVIKLIQEFATNSRRLLSQGGKR-SLYILTDE 75

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
                +A  I++ T   V      +  D      +  +F+   VL+ T++    +L    
Sbjct: 76  DKCTIKASYIQQLTDLKV------LLCDTCSTAEFIEKFEISHVLLATSKTCAQLLADKK 129

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           I    INL+I+DECH ++       ++       S    P + G+     NL     ++ 
Sbjct: 130 ILPHQINLVIVDECHKSINNSQLKFILQTI---LSCNNVPRIIGLAVPLFNLTQEPGRL- 185

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVE 541
             ++I  +E+     V T  D   + ++ P P E VVEY K+           ++ + +E
Sbjct: 186 -GLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKSEK--------GELHITIE 236

Query: 542 EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQ 601
                +    +       +   +E    +  + + TE      ++Q L  I   L  LG 
Sbjct: 237 NHILHAIEFLRDHRYDPTEIYNEEFYEDIQKIPDPTEK--PFEMMQDLLHI---LETLGP 291

Query: 602 WCAYKVAQSFL 612
           WCA + A + L
Sbjct: 292 WCADRAAFALL 302


>gi|242008637|ref|XP_002425109.1| dicer-1, putative [Pediculus humanus corporis]
 gi|212508774|gb|EEB12371.1| dicer-1, putative [Pediculus humanus corporis]
          Length = 471

 Score =  202 bits (513), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 224/413 (54%), Gaps = 38/413 (9%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YE  ++LGD++LK+  S FLF  YP  HEG LT ++ ++V N  L    ++K L ++I  
Sbjct: 8    YENLKILGDSFLKFSCSFFLFKTYPSLHEGILTNVKGKLVGNKNLLDCGVAKNLPNFINT 67

Query: 1462 DRFAPS------RWAAPGVLPVFDEDTKDGDSSLFDQEKS---------VAEDKLGTDKN 1506
            + F+P+       ++ P VL  +   +K+ D S+  + +          ++E+ + +++ 
Sbjct: 68   NDFSPNFDWNPPLFSTPEVLLNYIV-SKNMDPSIISRLEIPQKECLTGILSEETIESNRK 126

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
              + E+   + G ++    +  ++S KT++DVVEALIGVY + GG      ++ W GI  
Sbjct: 127  LID-EEGVKKLGLVKSPFLNTELMSDKTISDVVEALIGVYLLNGGLAGGFKILNWFGILP 185

Query: 1567 ESDPEEVGCPSRPACVPE---------SVLRSVDFHALEDALKIKFKDRGLLVEAITHAS 1617
            ES+        +P  V +         ++L  V +  LE+ L   FK + LL+EAITH S
Sbjct: 186  ESNGTYEEIMKKPVRVNDVNDEESAVMTILGDVFYTDLEETLGYTFKRKELLLEAITHPS 245

Query: 1618 RPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
               + ++ CYQRLEF+GDA+LD L+T ++  ++ ++ PG +TD+R+A VNN   A ++VK
Sbjct: 246  YVRNRLTPCYQRLEFLGDAILDFLVTVYIQENFKDMNPGLITDIRSALVNNSTLACLSVK 305

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEVL--------EELLKPGFNSFGLGD-CKAPKVLGDI 1727
            +  H +L + SS L++ I +FVK  +        + L+    N   + +    PK LGDI
Sbjct: 306  YDFHKYLLYTSSPLNKCIENFVKIQISNNHAVNEQALITLEENDAIMAESVTVPKALGDI 365

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--PMHPVRELQERCQQQ 1778
             ES+AGAIF+DS      VW VF  ++   +   T+  P   VR L E C ++
Sbjct: 366  FESLAGAIFIDSENSLETVWNVFYKIMKKELDEFTVNPPKTAVRVLHEICGEK 418


>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
          Length = 1979

 Score =  202 bits (513), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 252/546 (46%), Gaps = 96/546 (17%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1441 PSP-SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1499

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV---------L 1475
            VSNL LY+    K L   + A +F P   W  P               GV         +
Sbjct: 1500 VSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSALWNQADI 1559

Query: 1476 PVFDEDTKDGDSSLFDQ-EKSVAEDKLGTDKNYNEYEDD-DMEDGELEGDSSSYRVLSSK 1533
            P          + L  + E+ +   K   DKN +   ++ D     +  +  +   +  K
Sbjct: 1560 PTLQAMNPTEITQLVKETEEKLVIMKSELDKNESRLSNNLDNLRCFIPYNLITQHSIPDK 1619

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP---- 1579
            ++AD VEALIG Y +  G   A   M W+GI V          E++P+E    S P    
Sbjct: 1620 SIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPTEEICVISENEPKERIPGSTPYIKG 1679

Query: 1580 -----------ACV----------------PESVLRSV--DFHALEDALKIKFKDRGLLV 1610
                        C                 PES L  +   +  LE ++  KF+D   L+
Sbjct: 1680 VNEYRETTWTQICYGKLEEPQNPLLRYIPDPESELYMMLDGYEELEKSIGYKFRDSSYLL 1739

Query: 1611 EAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            +A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN  
Sbjct: 1740 QAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTI 1799

Query: 1670 FARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLGDCKAP 1721
            FA +AV+   H + RH S  L   I  FV+        + EE    G        D + P
Sbjct: 1800 FASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGEEECEEAEDVEVP 1859

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQA 1779
            K LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+REL E   + A
Sbjct: 1860 KALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLELEPETA 1919

Query: 1780 EGLEYKASRSGNLA-------TVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
                 K  R   LA       TV+V+  G   G+ +N   ++A+  AA+ AL  LK +  
Sbjct: 1920 -----KFGRPEKLADGRRVRVTVDVFGKGSFKGIGRN--YRIAKCTAAKCALKKLKSRIQ 1972

Query: 1833 AEAKEK 1838
              +++K
Sbjct: 1973 NYSRQK 1978



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 35/347 (10%)

Query: 724  AIIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQET 772
             +IFV++   A +L  + +E+           P  +  ++   +G++   EM   + +E 
Sbjct: 445  GVIFVDKGFTAKILFYLLSEICKHDEDLHFLSPLYTIERNTDDVGYSRDLEMGHRKQEEV 504

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR     LL+ATS+ EEG+DI +CN V+R+D  K   +YIQ + RAR   + ++L++
Sbjct: 505  LKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPKNYQSYIQCKSRARAMDALHVLLV 564

Query: 833  ERGNLSHATF-LRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAV 891
             +       + L   +  E+TL  +   + +L+  ++    +    +P            
Sbjct: 565  PQEASKEFIWQLAQYQYIEKTLLLKCSNK-ELTEDEENEADMYAAMIPHYKPLDGDDAPK 623

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER---HEKPGGPTEYSCKLQLPCNAPFEK 948
            V+ NSA+ L++ YC++LPSD ++ L PE+ +E    H+       Y C L+LP N+P + 
Sbjct: 624  VTFNSAISLVNRYCAKLPSDTFTRLTPEWRIETVNIHDI----MMYICFLRLPINSPLKY 679

Query: 949  LEGPVCSSMR-LAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE-- 1000
            +        R +A++   L  C  LH      D LLP      K   E  E     DE  
Sbjct: 680  VITSYPMPNRAMARRMAALQMCIDLHRENEIDDNLLPIGKENFKAKPEDAEVPALPDESR 739

Query: 1001 ---GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
                E  PGT + R++Y +  A+ L     + G      S L+H+ M
Sbjct: 740  ADFSEARPGTTKRRQYYYKKTAEALTDCRPIVG----VPSYLYHINM 782



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 18/143 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP   G+    +YS++ +YY +KYG+++   +Q L+     S   
Sbjct: 953  FYVAEICTNLNPKSSFP---GH----DYSTFEEYYYKKYGIQIQNLEQSLLDVDHTSARL 1005

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 1006 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1063

Query: 1360 SIMRRVESMLLAIQLKDKINYPV 1382
             I+ R+ ++LLA Q++ ++ Y +
Sbjct: 1064 CILYRINALLLANQIRCQVAYMI 1086



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 26/310 (8%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R Y++++L  AK+KN I  L   + +T +++ LI+    + +R   N    A++++    
Sbjct: 17  REYEVELLYAAKEKNIIVCLGKNSEQTFLSIKLIQEFATNNRRLVSNGGKRAIYILNDKD 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
                   I++ T   V      +  D    + + + F++  VLV T+++   ++  S +
Sbjct: 77  KCTIIGTYIKQLTDLKV------LACDSGVLEGFDKSFESSHVLVGTSKVYAQLISESKL 130

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
               INL+I+DECH +++      V+  F    +    P + G+     NL     ++  
Sbjct: 131 LPCHINLVIVDECHKSIEDSNLKFVLQTFLLCNNV---PRIIGLAVPVFNLTQEPGRL-- 185

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
            ++I  +E+     V T  D   + ++ P P E VVEYD+      L++ LK    +   
Sbjct: 186 GLEIEKVEAAFQCEVETANDILSIIRYSPKPREYVVEYDRGEKK-DLYDTLK----SCVS 240

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
            A    R  ++  M        E+++++         D      + ++   + L  LG W
Sbjct: 241 HAIEFLRDHRYDPMEIYTEEFYEDIQKI--------PDPIQKPFEMMQDFLHILETLGPW 292

Query: 603 CAYKVAQSFL 612
           CA + A + L
Sbjct: 293 CADRAALTLL 302


>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease DCL-2; Includes: RecName:
           Full=ATP-dependent helicase DCL-2
 gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
          Length = 1451

 Score =  202 bits (513), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 204/727 (28%), Positives = 326/727 (44%), Gaps = 107/727 (14%)

Query: 290 GKKSEAKEKMPEE----QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDL 345
           G K   KE++P++     AR YQL++LE + K+N I  ++TG+GKT +A+L I++   +L
Sbjct: 45  GGKPRPKEQLPKDIVKMDARAYQLEMLEASLKENIICAMDTGSGKTHVAILRIKA---EL 101

Query: 346 QRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQ 404
           +   +  +  FL P V L  QQ  V++ Q   V      G    D W +  W       +
Sbjct: 102 EEMPEGQVVWFLTPTVSLCAQQYAVVKAQIPSVQTKIVTGADKVDSWSSTTWDGALLNVK 161

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFY--HTTSKEKRPS 462
           V++ T Q+LL+ L H  + + ++ L++ DE HH  K H YS VM EFY    T  E  P 
Sbjct: 162 VIITTPQVLLDALLHGFVNISSLALMVFDEAHHCNKNHAYSRVMKEFYWESKTKHEPVPR 221

Query: 463 VFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVEYD 521
           + G+TASPV    +SS       +  LES LD+V     + R+EL  +   P+   + Y+
Sbjct: 222 ILGLTASPVVRSDISS-------LKRLESTLDAVCRSPTRHREELIANSQRPALFSIIYN 274

Query: 522 KAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
                +               AA  S   +K   M AR+      L   Y VS R E   
Sbjct: 275 PKLQPY---------------AAGFSESLTK--LMAARN--KLNILEDPYVVSLRAEISD 315

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
            +      R +  A+ E   +    V  +  +  +       +L     + ++S+ + L 
Sbjct: 316 RSR-----RKLEKAIKEKRTY----VQDTMKSFCRRSMEMAKELGAWAADWFISEAIRLF 366

Query: 642 QCELV-EGAVSK--KDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVA 698
              +  +GA SK  +DA+V+     F +     IE    L +H  SG             
Sbjct: 367 LAGIYRQGASSKSFRDAEVIFLARVFQDAN---IEPPPPLTTH--SG------------- 408

Query: 699 DGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIG 757
              ++ KVQ +I++LL Y   +D RAI FV+     +VL  +    P +S   +  +++G
Sbjct: 409 ---LSEKVQRIIEVLLNYD--KDARAICFVKERATTVVLSHILTTHPEVSSKFRIGTMVG 463

Query: 758 HNNSQEMRT--FQMQET-----IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
            +    ++     + ET     +  FR+GR  +LVATSV EEG+D+  CN++I FD    
Sbjct: 464 TSFVPGVKRDFLDLPETGGSQCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNN 523

Query: 811 VLAYIQSRGRARKPGSDYILMIER------GNLSHATFLRNARNSEETLRKEAIERTDLS 864
           + A+IQ RGRAR   S   L +E         L     L+      E  R EAIE ++  
Sbjct: 524 LRAFIQRRGRARMRQSHLYLFVEDEAEADWEALEAQMKLQYEDEKREHERLEAIENSEAL 583

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
              +  R             VESTGA +++N A   +  + S L S ++   +P++++E+
Sbjct: 584 DYPEELR-------------VESTGARLTINDAKSHLQHFVSTLASRKFVQTQPDYLIEK 630

Query: 925 HE---KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC----KKLHEMGA 977
                +PG        + LP + P + L     S   ++++  C+ A     K L+E G 
Sbjct: 631 VSQGYQPGDQPLLKATVLLPVSVP-QALRQVTSSRTWVSEKNACMDAAFQAYKALYEAGL 689

Query: 978 FTDMLLP 984
             D LLP
Sbjct: 690 VDDHLLP 696



 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 189/465 (40%), Gaps = 96/465 (20%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI--- 1387
            K Y   LP E   +  +P    +    +PS++   E  L+A +L  K+  P+  S +   
Sbjct: 928  KPYAYILPAETTTVDRIPLVYAQMGLLMPSLVCYTELYLVAAELSRKVLAPLRISNVSML 987

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            +EA+ A S +    YER E LGD+ LK  ++  L        EG L+ M+ ++VSN  L 
Sbjct: 988  VEAICAKSARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLVSNARLC 1047

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A    L  ++   +     W  P +           D +  DQE              
Sbjct: 1048 RAACDAELDQFLVTQQLVTKGWQPPYM----------SDLAKQDQE-------------- 1083

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                              S R+LS KTLADVVEALIGV +V+GG   A   ++    + +
Sbjct: 1084 ----------------PESKRILSPKTLADVVEALIGVSFVDGGLPKALECIRLFIPESQ 1127

Query: 1568 SDP-EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VSC 1625
              P  EV      A  P+ +    D   LE  ++  F ++ LLVEA+TH S   SG V+C
Sbjct: 1128 PRPFSEVRDILFGAAEPKGMKLPADLQLLEQLIEYSFCEKALLVEAVTHPSYNVSGTVAC 1187

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------- 1666
            Y RLEF+GDA+LD++I + +F     L   ++  LR A VN                   
Sbjct: 1188 YDRLEFIGDAILDYIIVEEVFALEPALENWQMHLLRTALVNADILGFLIMEWSYKQMGFE 1247

Query: 1667 ----NE------------------NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
                NE                     +  V   L   +R  S+ L  + R+  K   EE
Sbjct: 1248 VCRANEGDSDSKSSGDSTSDKASPRLEQTEVPIPLWSFMRQSSAELTME-REITKARFEE 1306

Query: 1705 LLKPGFNSFGLGD---------CKAPKVLGDIVESIAGAIFLDSG 1740
            L  P   +   G            A K   D  E++ GAI++D+G
Sbjct: 1307 LRDPILEAMRSGTHYPWALFARLHAQKFYSDFFEALVGAIWVDAG 1351


>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
 gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
 gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
          Length = 1722

 Score =  201 bits (511), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 315/727 (43%), Gaps = 109/727 (14%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           E + R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+ 
Sbjct: 5   EIKPRGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMC 64

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++ 
Sbjct: 65  NTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVT 124

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + + + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG + 
Sbjct: 125 QTYVALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NE 180

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AA 524
             + A K+  LE      + T+ D KE+E    +   P+EV+V +             +A
Sbjct: 181 ITNVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISA 240

Query: 525 SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
            +   +  L  M + V+       RRSK      RD   K  ++Q++             
Sbjct: 241 EIEKFYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN------------ 282

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
                    Y + E G + A     S +       R    L VK     L    +L  CE
Sbjct: 283 ------DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCE 331

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
            +   + +   K+ D      +   N  E                 VI+  +      TP
Sbjct: 332 KIRHLLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TP 365

Query: 705 KVQSL---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-L 755
           KVQ     +K+    +  +D   ++FVER      +  L+L  +    P L  V +   +
Sbjct: 366 KVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFM 424

Query: 756 IGHNN------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           +G NN      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  K
Sbjct: 425 VGRNNISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVK 483

Query: 810 TVLAYIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLS 864
           T   Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+  
Sbjct: 484 TFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-P 542

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IME 923
            L +       D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++
Sbjct: 543 ELYEIKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQ 598

Query: 924 RHEKP-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
             E+          ++   + +P N    + +      +++ A+ +    ACK L+ +G 
Sbjct: 599 EDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGE 658

Query: 978 FTDMLLP 984
             +  +P
Sbjct: 659 LNERFVP 665



 Score =  155 bits (392), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 233/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1165 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1224

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1225 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1284

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1285 PHNVLALWRENPEFAKIIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1342

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1343 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1402

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++ + LE  L   FKDR  L++A+TH S P++
Sbjct: 1403 PLTQLLNLELGGKKMRANVNTTEIDGFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTN 1462

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1463 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1522

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1523 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1582

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1583 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1641

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1642 EPELQEFTRKVPINHIRQLVE 1662


>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655



 Score = 43.5 bits (101), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S   + +      +  +Y ++   KYG   
Sbjct: 869  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQ------QDKTYYEFTMSKYGNRI 922

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + +I  R        L+ +        G+          V L PELCF    P
Sbjct: 923  GDVVHKDKFMIEVRD-------LTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFP 975

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 976  GDLWLKLIFLPSILNRMYFLLHAEALRKRFN 1006


>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHFYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655


>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S   + +      +  +Y ++   KYG   
Sbjct: 869  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQ------QDKTYYEFTMSKYGNRI 922

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + +I  R        L+ +        G+          V L PELCF    P
Sbjct: 923  GDVVHKDKFMIEVRD-------LTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFP 975

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 976  GDLWLKLIFLPSILNRMYFLLHAEALRKRFN 1006


>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (510), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKIIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S   + +      +  +Y ++   KYG   
Sbjct: 869  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQ------QDKTYYEFTMSKYGNRI 922

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + +I  R        L+ +        G+          V L PELCF    P
Sbjct: 923  GDVVHKDKFMIEVRD-------LTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFP 975

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 976  GDLWLKLIFLPSILNRMYFLLHAEALRKRFN 1006


>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (510), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDVNYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655



 Score = 43.5 bits (101), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S   + +      +  +Y ++   KYG   
Sbjct: 869  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQ------QDKTYYEFTMSKYGNRI 922

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + +I  R        L+ +        G+          V L PELCF    P
Sbjct: 923  GDVVHKDKFMIEVRD-------LTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFP 975

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 976  GDLWLKLIFLPSILNRMYFLLHAEALRKRFN 1006


>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (510), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT   A+  KR  V  +  E+T  S   + +      +  +Y ++   KYG   
Sbjct: 869  DFEGKIVTQWYANYDKRMLVTKVHRELTPLSYMEKNQ------QDKTYYEFTMSKYGNRI 922

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + +I  R        L+ +        G+          V L PELCF    P
Sbjct: 923  GDVVHKDKFMIEVRD-------LTEQLTFYVHNRGKFNAKSKAKMKVILIPELCFNFNFP 975

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 976  GDLWLKLIFLPSILNRMYFLLHAEALRKRFN 1006


>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (510), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  154 bits (390), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKMIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++   LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655


>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
          Length = 1715

 Score =  201 bits (510), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 313/723 (43%), Gaps = 109/723 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V 
Sbjct: 2   RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + +
Sbjct: 62  LARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG +   + 
Sbjct: 122 ALSSLSVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNV 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWS 528
           A K+  LE      + T+ D KE+E    +   P+EV+V +             +A +  
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEK 237

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            +  L  M + V+       RRSK      RD   K  ++Q++                 
Sbjct: 238 FYVSLDLMNIGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN---------------- 275

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                Y + E G + A     S +       R    L VK     L    +L  CE +  
Sbjct: 276 --DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRH 328

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +   K+ D      +   N  E                 VI+  +      TPKVQ 
Sbjct: 329 LLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TPKVQR 362

Query: 709 L---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
               +K+    +  +D   ++FVER      +  L+L  +    P L  V +   ++G N
Sbjct: 363 FLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRN 421

Query: 760 N------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           N      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   
Sbjct: 422 NISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNM 480

Query: 814 YIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKD 868
           Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+   L +
Sbjct: 481 YVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYE 539

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK 927
                  D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+
Sbjct: 540 IKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDER 595

Query: 928 P-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                     ++   + +P N    + +      +++ A+ +    ACK L+ +G   + 
Sbjct: 596 DRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNER 655

Query: 982 LLP 984
            +P
Sbjct: 656 FVP 658



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 233/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1158 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1217

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1218 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1277

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1278 PHNVLALWRENPEFAKIIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1335

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1336 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1395

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++ + LE  L   FKDR  L++A+TH S P++
Sbjct: 1396 PLTQLLNLELGGKKMRANVNTTEIDGFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1576 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1634

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1635 EPELQEFTRKVPINHIRQLVE 1655


>gi|307169911|gb|EFN62420.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
          Length = 506

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 145/438 (33%), Positives = 217/438 (49%), Gaps = 47/438 (10%)

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            A +I+ ALT     + F  ER E LGD+YLK++ S FL+ K+P  +EGQLT ++ +++ N
Sbjct: 27   AVEIMHALTTKLGNDMFDLERLETLGDSYLKFITSLFLYHKFPAFNEGQLTALKGKIIGN 86

Query: 1444 LVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
              LY     K +   I+ D F P S + AP    +        D S+      + E ++ 
Sbjct: 87   RNLYYCGNKKNIPGRIKNDAFIPTSNFIAPAYTVLRPLQKILLDESV--APNVLYELRIP 144

Query: 1503 TDKNYNEY--EDDDMEDGEL------EGDSSSY------RVLSSKTLADVVEALIGVYYV 1548
             ++ +  Y  ED  M   ++      E   + Y      ++LS KT+AD VEALIGVY  
Sbjct: 145  EEEKFTGYISEDTKMTMQQIVMNWDKEDTKTGYEHYLGVQILSDKTIADSVEALIGVYLK 204

Query: 1549 EGGKDAANHLMKWIGI--QVESDPEEVGCPSRPACVPESVLRSVDF-HALEDALKIKFKD 1605
              G   A  L+KW GI   ++ D      P  P   P +    + + + +E  +  KF +
Sbjct: 205  SNGIKGAAKLLKWFGILPNIQIDELLYSNPPDPLINPGNPNSYMPWANDMETKIGYKFNN 264

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            R  L++A TH S  P+    CYQRLEF+GDA+LD LIT +++ +  NL PG LTDLR+A 
Sbjct: 265  RAFLLQAFTHPSYTPNVITECYQRLEFLGDAILDFLITCYIYETCGNLSPGHLTDLRSAL 324

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD------- 1717
            VNN  FA +AV++ L   L   +  L   I  FVK   E        ++ + D       
Sbjct: 325  VNNITFACLAVRYGLDTALLSYAPKLHEAIDRFVKFQQER-------NYVVNDELLWVLL 377

Query: 1718 ----------CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
                         PKVLGD+ ES+ GAI+LDSG++ + VW++        +    +  P 
Sbjct: 378  EEEECNLAEYVDVPKVLGDLFESLIGAIYLDSGKNLTKVWEIVYSFTHKEIDKFSKNTPK 437

Query: 1766 HPVRELQERCQQQAEGLE 1783
            HPVR + E    + + L+
Sbjct: 438  HPVRLIYENTDSRPKFLD 455


>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
          Length = 2271

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 165/543 (30%), Positives = 248/543 (45%), Gaps = 105/543 (19%)

Query: 1380 YPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R 
Sbjct: 1721 HPGPSPSVILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRS 1780

Query: 1439 QMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV-------- 1474
            + VSNL LY+    K     + A +F P   W  P               GV        
Sbjct: 1781 KQVSNLNLYRLGRRKVFGESMIATKFEPHDNWLPPCYYVPRELEQALIEAGVPASHWNQA 1840

Query: 1475 -LPVFDEDTKDGDSSLFDQ-----------EKSVAEDKLGTDKNYNEYEDDDMEDGELEG 1522
             LP   + ++D    L  +           E  + E+ L T   Y   E+       +  
Sbjct: 1841 DLPALRDLSRDEICELVRERSEKLRKTTMGEDGLPEEVLLTSGPYTNIEN---LPCFIPY 1897

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI------------------ 1564
            +  +   +  K++AD VEALIG Y +  G   A   M W+GI                  
Sbjct: 1898 NLITQHSIPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPKEEVIFSMPCAEVK 1957

Query: 1565 -----------QVESDPEEVGC------------PSRPACV-----PESVLRSV--DFHA 1594
                       Q+  D  E  C            P R   +     PE+ LR +   +  
Sbjct: 1958 EIRPVGSTTSVQINGDNTETSCLQWKQVRYGNLKPPRSPLLRSVSNPEAELRRLLDGYDV 2017

Query: 1595 LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             E  ++ KF+DR  L++++THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       
Sbjct: 2018 FERRIRYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHS 2077

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE--------- 1704
            PG LTDLR+A VNN  FA +AV++  H + RH S  L+  +  FV+ + EE         
Sbjct: 2078 PGALTDLRSALVNNTIFASLAVRYGFHKYFRHLSPGLNEVVDRFVR-IQEENGHTISEEY 2136

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
             L          D + PK LGD+ ES+AGAIFLDSG     VW+V+  ++   +      
Sbjct: 2137 YLIEEEECEEAEDVEVPKALGDVFESVAGAIFLDSGMSLDAVWRVYYRMMKSEIEQFSTN 2196

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAA 1820
            +P  P+REL E   + A+  + +    G     TVEV+  G   G+ +N   ++A+  AA
Sbjct: 2197 VPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVEVFGKGTFKGIGRN--YRIAKCTAA 2254

Query: 1821 RNA 1823
            + A
Sbjct: 2255 KCA 2257



 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPKVP 362
           R YQ+++L+ AK++N I  L TG+GK  IA  LI+ + N ++R   K     +++V  V 
Sbjct: 17  REYQVELLDAAKERNIIVCLATGSGKIFIATKLIQELANAVRRPFHKDGKRTLYVVDTVA 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           +V QQA  IR  T   VG Y      + WD + W++EF   QVLVMT+QI L+I+  S +
Sbjct: 77  MVAQQASYIRHLTDLTVGEYVSSEAVEMWDNEDWEQEFLENQVLVMTSQICLDIMECSYL 136

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           +M  +NL+ILDECH A+++HP   +M E+     K   P + G+TA  +N      +++ 
Sbjct: 137 QMNYLNLIILDECHRALREHPIRQIMKEYITCCEK---PRILGLTAPLLNSTCDPGRLEG 193

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVE 519
            I+   LE  L S   T  D   + ++   P E+VVE
Sbjct: 194 EIR--RLELVLHSSAETASDIVSVLRYCTKPKELVVE 228



 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 38/350 (10%)

Query: 724  AIIFVERVVAALVLPKVFAEL----PSLSFV-------KSASLIGHNNSQEMRTFQMQET 772
             I+FV+    A +L  +  +L       +F+       K A  I      E+   + +E 
Sbjct: 661  GIVFVDHRFTAKILYHLLNDLRRFDEDFTFLMAQYTVDKVADPISDPREAEIEHRKQEEV 720

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + +FR     LLV TSV EEG+D+ +CN+VI F++ +   +Y+QS+GRAR   + YILMI
Sbjct: 721  LKRFRMRECNLLVGTSVLEEGIDVPKCNLVIHFNVPQVYRSYVQSKGRARAQDAYYILMI 780

Query: 833  ERGNLSH-ATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAV 891
            E          L      E+ L ++   R      +  +   + D +P            
Sbjct: 781  EEDRSKQFVNDLAQYFEIEQMLLRKCANREPTEEEESEADKYT-DLIPSYCPSDSPNSPS 839

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK-LE 950
            V++ +AV L++ YC++LPSD ++ L P + + +     G   + C ++LP N+P ++ + 
Sbjct: 840  VNMATAVALVNRYCAKLPSDTFTRLTPMWNV-KTTSDNGLISFICTVRLPINSPVKQDIV 898

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ------------- 997
            G    S  LA++   L  CK LH+     D L+P    G++  +V +             
Sbjct: 899  GLPMPSRVLARRIAALETCKVLHKTQELDDNLMP---VGKESFRVHEEEETTLALEELEE 955

Query: 998  ---NDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
                D  EP PGT + R++Y + +AD L     + G+     + L+H+ M
Sbjct: 956  MVPRDSTEPRPGTTKRRQYYYKRIADSLTDCRPIPGQ----PAYLYHISM 1001



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 18/143 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S+FP  E       Y ++ +YY +KY +++   KQPL+     S   
Sbjct: 1169 FYVAEICGHLNPKSTFPGSE-------YKTFDEYYFKKYNIQIQNSKQPLLDVDHTSARL 1221

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1222 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRKAVCLP 1279

Query: 1360 SIMRRVESMLLAIQLKDKINYPV 1382
             I+ R+ ++LLA Q++  + + +
Sbjct: 1280 CILYRINALLLADQIRRHVAFSI 1302



 Score = 47.8 bits (112), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 1566 VESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC 1625
            V+SD ++   P + +   E ++    F A  D          ++++A+T  S  + G++ 
Sbjct: 1689 VQSDSDD---PGQESDTEEDIINKFSFDAQPDLQGHPGPSPSVILQALT-MSNANDGIN- 1743

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA 1674
             +RLE +GD+ L + IT +L+ +Y N+  G+L+ LR+  V+N N  R+ 
Sbjct: 1744 LERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQVSNLNLYRLG 1792


>gi|315051166|ref|XP_003174957.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
 gi|311340272|gb|EFQ99474.1| hypothetical protein MGYG_02485 [Arthroderma gypseum CBS 118893]
          Length = 1425

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 191/738 (25%), Positives = 345/738 (46%), Gaps = 101/738 (13%)

Query: 286 NGKVGKKSEAKEKMPEEQ--------ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           +G + +   A E+ P++Q        +R YQ+++L+++ K+N I  ++TG+GKT IA+L 
Sbjct: 20  SGGMSQGEAAHEESPKDQEAAPAMVKSRTYQIEMLKESLKQNIIVAMDTGSGKTQIAILR 79

Query: 338 IRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR- 395
           IR   ++L+R +   L  FL PKVPL  QQ   I  Q   +      G    + W  Q+ 
Sbjct: 80  IR---HELERCSNDKLVWFLAPKVPLAEQQYRAISSQLPAFQTKILTGADNLERWSTQKI 136

Query: 396 WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT- 454
           W       +++V T Q+LL+ L +  I ++ I LLI DE HH VK  P + +M  FYH  
Sbjct: 137 WDAFLLNTRIVVSTPQVLLDALSNGFITLQRIALLIFDEAHHCVKSSPENRIMQNFYHAR 196

Query: 455 ----TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKH 509
               +     P + G+TASP      SS ++ A++   LE  L +   T    R+++ + 
Sbjct: 197 KDQLSETNDLPYILGLTASP-----TSSLIENALR--QLEQNLHACCKTPTIHREDMMQF 249

Query: 510 VPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQ 569
           V +P    V Y +  S+  L+ +LK + +  +   +      ++Q  G  D   ++ L +
Sbjct: 250 VHIPELRKVSY-QNDSIIPLNMELKFLSMLNDIDTKYDPFFQRYQ--GKTD---RKSLER 303

Query: 570 VYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKF 629
              V+ R ++     L +  R I++  GELGQW +                         
Sbjct: 304 FSLVAAR-KTPCFVQLKRCCRRISHMFGELGQWAS------------------------- 337

Query: 630 QESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHV 689
             +Y+S+V              +K+ K++D    + E   ++        S + +  + V
Sbjct: 338 -STYISEVYR---------RAREKETKLLD--QNWSEWDRDDT-------SFICNALKPV 378

Query: 690 DVIIGAAVADGK---VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPS 746
             I+G    +     ++ KV+ L+ I L  + T   R IIFVE+   A++L  + +  P 
Sbjct: 379 VEIMGERCWNAPPDVISEKVEHLVHI-LSSELTGASRGIIFVEQRATAVMLTHLISHHPR 437

Query: 747 LSFVKSASLIGHNN--------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQ 798
           L+ V S   +G++         ++  +   M+++I   R G+  LL+ATSV EEG+D+  
Sbjct: 438 LTHVNSDYFLGNSAFAARKSDITELSKAGDMKDSIDDLRSGKKNLLIATSVLEEGIDVSA 497

Query: 799 CNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           C++V+ FD  K + +++Q RGRARK  S +++     +    T  +    + E + KE  
Sbjct: 498 CDLVVCFDPPKQLRSFVQRRGRARKASSKFVIFYAEDD----TTTKKDWEAMEDIMKEKY 553

Query: 859 ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP 918
             ++ + +         + V    +++ESTGA+++L +A   +  +CS LP + ++  +P
Sbjct: 554 S-SNKAFIDSLLEQEDEEEVEYESFRIESTGALLTLENAPSHLSHFCSTLPCE-FTDTQP 611

Query: 919 EFIMERHEKPGGPTEYSCKLQLPC--NAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEM 975
           +FI+    K G     + K+ LP   +  F   EG       ++A++     A  +L++ 
Sbjct: 612 DFII---SKVGIKDLLTAKVLLPTVLDHQFRDFEGIEAWKKEKMAKRDAAFQAYLQLYKA 668

Query: 976 GAFTDMLLPDKGSGEQQE 993
           G   D L+P+      +E
Sbjct: 669 GLVNDHLMPEHCRATDEE 686



 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 194/451 (43%), Gaps = 95/451 (21%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTA 1393
            +P     I  LP    + A  +PS++  +   LLA  L + I   +    I   L A+TA
Sbjct: 920  IPARQSSISMLPMGFTKFALFIPSLIHSIGRFLLAEDLSNTILSSIGFKDIKLVLTAITA 979

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S +E   Y+R E LGD+ LK   S  L   +P  HEG L++ +  +VSN  L++ A+  
Sbjct: 980  TSARENTNYQRLEFLGDSALKLHASMQLLADHPIWHEGILSKKKDSIVSNSRLWKAAVDT 1039

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W      P+++               S     +GT +     E  
Sbjct: 1040 GLDRFILTTCFTGAKWR-----PLYN---------------STYRHNVGTARREQTRE-- 1077

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
                            LS+KTLADVVE+LIG   V+GG++     ++    ++   P   
Sbjct: 1078 ----------------LSTKTLADVVESLIGAAIVDGGENKVLRCLELFLPEINWLPSGE 1121

Query: 1572 --EVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCY 1626
              E+   S P      P  +L  +     E  +   F  R LL  +++H S   SG++ Y
Sbjct: 1122 RVEILYDSAPDFSDDFPRDILSKI-----EPLIDYSFTKRALLAASLSHPSNLISGMT-Y 1175

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH--------- 1677
            QRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +K          
Sbjct: 1176 QRLEFLGDSILDNVVTRALFRCDKEIPHQDMHLIRTALVNADFLAFLCMKTSTDERREDV 1235

Query: 1678 -----------------KLHVHLRHGSSALD------------RQIRDFVKEVLEELLKP 1708
                              L  ++ H S++LD             ++RD + + L    + 
Sbjct: 1236 CASPTGNVKVTSSTRRVSLWQYMAH-SASLDILETQQAMACTFEKLRDEIDDALRSGTRY 1294

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
             +    L    APK   DIVESI GAIF+DS
Sbjct: 1295 PWTL--LSTLNAPKFFSDIVESILGAIFIDS 1323


>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
          Length = 1722

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 188/727 (25%), Positives = 313/727 (43%), Gaps = 109/727 (14%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           E + R YQL +++   K N I +L TG+GKT +A+L+++    D  +  ++    A+F+ 
Sbjct: 5   EIKPRGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMC 64

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V L  QQA  +R  T + VG Y GE G D W    W  E    QVLV TAQ+ L+++ 
Sbjct: 65  NTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVT 124

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + + + ++ ++I+DECHH    HP+   M   +   ++ K P V G+T   V +KG + 
Sbjct: 125 QTYVALSSLGVVIIDECHHGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NE 180

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDK-----------AA 524
             + A K+  LE      + T+ D KE+E    +   P+EV+V +             +A
Sbjct: 181 ITNVATKLKELEITYRGNIITVSDTKEMENVMLYATKPTEVLVSFPHQEQVLTVTRLISA 240

Query: 525 SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
            +   +  L  M   V+       RRSK      RD   K  ++Q++             
Sbjct: 241 EIEKFYVSLDLMNFGVQPI-----RRSK-SLQCLRDPSKKSFVKQLFN------------ 282

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
                    Y + E G + A     S +       R    L VK     L    +L  CE
Sbjct: 283 ------DFLYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCE 331

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
            +   + +   K+ D      +   N  E                 VI+  +      TP
Sbjct: 332 KIRHLLVQ---KLQDMTYDDDDDNVNTEE-----------------VIMNFS------TP 365

Query: 705 KVQSL---IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-L 755
           KVQ     +K+    +  +D   ++FVER      +  L+L  +    P L  V +   +
Sbjct: 366 KVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFM 424

Query: 756 IGHNN------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           +G NN      S   R +Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  K
Sbjct: 425 VGRNNISPDFESVLERKWQ-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVK 483

Query: 810 TVLAYIQSRGRARKPGSDYILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLS 864
           T   Y+QS+GRAR   + ++L     ER       +  R A N   E L+   +E+T+  
Sbjct: 484 TFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-P 542

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IME 923
            L +       D  P T       GAV+  N+A+ ++H YC  +P+D +  + P F +++
Sbjct: 543 ELYEIKGHFQDDIDPFT----NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQ 598

Query: 924 RHEKP-----GGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
             E+          ++   + +P N    + +      +++ A+ +    ACK L+ +G 
Sbjct: 599 EDERDRIFGVSAKGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGE 658

Query: 978 FTDMLLP 984
             +  +P
Sbjct: 659 LNERFVP 665



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 233/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1165 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1224

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1225 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1284

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1285 PHNVLALWQENPEFAKIIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1342

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1343 YAGADFSSEVNFCVGLVTILNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1402

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++ + LE  L   FKDR  L++A+TH S P++
Sbjct: 1403 PLTQLLNLELGGKKMRANVNTTEIDGFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTN 1462

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1463 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1522

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1523 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPPDLDDELDMTELPHA 1582

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1583 NKCISQEAEKGVPPKGEFSMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1641

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1642 EPELQEFTRKVPINHIRQLVE 1662


>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
 gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
          Length = 342

 Score =  200 bits (509), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 194/347 (55%), Gaps = 19/347 (5%)

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            S    A+E  L   FK++ L+ EA+TH+S  +S    YQRLEF+GDA L   ++ H+F +
Sbjct: 4    SSSISAVEKILNYTFKNKQLVEEALTHSSYTAS--PNYQRLEFIGDAALGLALSNHVFLA 61

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVL---EEL 1705
            Y +L PG L+ LRAA ++ E  ARVAVKH L   LRH ++ALD ++++F   VL   +E 
Sbjct: 62   YPDLDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFSDAVLREEDEA 121

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
            +  G      G  KAPKVL DIVES+A A+++D   D   +W +F+ LL+P+VTPE L  
Sbjct: 122  VAHG------GTVKAPKVLADIVESVAAAVYVDVNFDLQRLWVIFRGLLEPIVTPEDLQQ 175

Query: 1766 --HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
               P+  L E CQ++ + ++    +SG      +Y+DG  V    + QK+ A+  AA+ A
Sbjct: 176  QPQPMTMLFELCQKKGKEVDIVHWKSGTKNIASIYVDGGFVASGSSEQKETAKLNAAKGA 235

Query: 1824 LAVLKEKETAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPA 1881
            L  L     +       E+  K   G+      ++ L+++C ++ WP P Y   +E GP+
Sbjct: 236  LQKLSHLMPSNLGHF--EDVLKTIGGSFEIEGAKRKLHELCGKKKWPKPTYNIEKETGPS 293

Query: 1882 HAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            H K++  +V++ T D        G+    VK+A +SAA L++  L +
Sbjct: 294  HEKKYVCSVQIATVDG--VLYMRGDEKMRVKEADNSAASLMIRALQE 338



 Score = 48.1 bits (113), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 41/174 (23%)

Query: 1378 INYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            +NY     +++E ALT +S   +  Y+R E +GDA L   +S  +FL YP    G L+ +
Sbjct: 14   LNYTFKNKQLVEEALTHSSYTASPNYQRLEFIGDAALGLALSNHVFLAYPDLDPGHLSLL 73

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD-GDSSLFDQEKS 1495
            R   +S   L + A+  GL  +++ +  A             D+  K+  D+ L +++++
Sbjct: 74   RAANISTEKLARVAVKHGLFRFLRHNATA------------LDDKVKEFSDAVLREEDEA 121

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            VA    GT K                         + K LAD+VE++    YV+
Sbjct: 122  VAHG--GTVK-------------------------APKVLADIVESVAAAVYVD 148


>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
 gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
          Length = 1623

 Score =  200 bits (509), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 162/487 (33%), Positives = 237/487 (48%), Gaps = 53/487 (10%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            +I +ALTAA   +    ER E LGD++LK+V S ++  K+P  +EG+ T ++ ++VSN  
Sbjct: 1145 QIYQALTAAEANDIVNLERLETLGDSFLKFVASLYIIFKFPTYNEGKSTTLKGKLVSNKN 1204

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS-----SLFDQEKSVAEDK 1500
            LY   + K L   ++    +PS W  P            G+      SLF+   S  E  
Sbjct: 1205 LYYLGVRKNLGGILKNSDLSPSDWVPPCFCIPQTISKAIGNKEYSVVSLFNCCISPEEQV 1264

Query: 1501 LGTDKNYNEYEDDDMEDGELEGD-SSSY---------RVLSSKTLADVVEALIGVYYVEG 1550
             G   N N     DM   E+  D  +SY         + +  K++AD VEAL+G Y++ G
Sbjct: 1265 SG---NLNRKTLSDMTTEEIAPDEENSYGNMCNFLNKQYVGDKSIADSVEALLGAYFLSG 1321

Query: 1551 GKDAANHLMKWIGI-----QVESDPEEVGCPSRPACVPESVLRSVDFHA-----LEDALK 1600
            G       M+WIGI     Q++   E       P    +S    VDFH      +E  L 
Sbjct: 1322 GIQGGIKFMEWIGILPLSEQIQRLIETTQV--DPVLNKKSTKTDVDFHMPQWREIEQRLG 1379

Query: 1601 IKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
              F +R  L++A+TH+S  P+     Y+RLEF+GDAVLD LIT ++F    +L PG++TD
Sbjct: 1380 YTFTNRAFLLQALTHSSYSPNRITLSYERLEFLGDAVLDFLITCYIFEHCGHLEPGQVTD 1439

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV-----------KEVLEELLKP 1708
            LR++ VNN  FA + V+   H  L   +S L   I  F             EVL  L + 
Sbjct: 1440 LRSSLVNNNTFASLVVRCGFHKFLLMMNSNLQGHIDKFADYLASKNYVIDDEVLILLEED 1499

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL--DPMVTPETLPMH 1766
              N     D   PKVLGDI E++AGAI+LDS +D   VW+VF  ++  +  +  + +P +
Sbjct: 1500 EMNIAEYVD--VPKVLGDIFEALAGAIYLDSNKDLKTVWRVFYKIIWREIDLFSKNVPKN 1557

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQN-----PQKKMAQKLAAR 1821
             +R L E C         KA   GN  T+ V +D +  G  +        K +A++ AA+
Sbjct: 1558 VIRRLYE-CHTVYPPQFSKALEVGNQKTM-VSLDFMCEGRKKRVHGFGTNKILAKRAAAK 1615

Query: 1822 NALAVLK 1828
             AL  LK
Sbjct: 1616 IALRALK 1622



 Score =  144 bits (364), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 123/203 (60%), Gaps = 7/203 (3%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           E + R YQ++++E A ++NTI +L TG+GKT IA+++++ +C  + R   +   ++V LV
Sbjct: 6   ELKPRNYQVNLMEIAIRENTIIYLPTGSGKTFIAIMVLKQLCAPILRPYSDGGKISVILV 65

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V LV Q  + +R+   + VG Y GEM  DFW    W+++F+  QV++MT+QI++N++ 
Sbjct: 66  NSVALVDQHGKYVRDHATFSVGTYTGEMNVDFWSEAEWEQQFNKYQVVIMTSQIMVNLIN 125

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
           +  I +  +NL+I DECHH V+  P   +M  F+  T K   P V G+TA+ +N     S
Sbjct: 126 NRFIDLGKVNLMIFDECHHGVEDQPMRQIMKHFHSCTDK---PRVLGLTATLLNGNCKLS 182

Query: 479 QVDCAIKICNLESKLDSVVCTIK 501
           +V   I+  +LE    S V T++
Sbjct: 183 KVMDEIR--SLEVTFHSKVATVE 203



 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 148/300 (49%), Gaps = 22/300 (7%)

Query: 705 KVQSLIKILLKYQ--HTEDFRAIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIGH 758
           KV  + +IL +Y+    E+   ++F +R   A VL  +  +     P    +KS  ++G+
Sbjct: 357 KVLKVFEILDEYKTKSDEELCCLVFTKRRFTAKVLHHIIDKASQVDPKFYHIKSNFVVGN 416

Query: 759 NNS--QEMR-----TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
            N+   + R     T + +E +  F    + +LV+++V EEG+DI +C +VI+FD ++  
Sbjct: 417 KNNPYNDTRENLYITKKNREVLNSFVSKEINVLVSSNVLEEGVDIPKCTLVIKFDKSEDY 476

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI----ERTDLSHLK 867
            +YIQS+GRAR   S Y  ++E  +++      +A    E L  + +       D  +L 
Sbjct: 477 RSYIQSKGRARHIKSLYYTIVETTDVAKYDKKYSAFKEIENLVNDLLIGKNSERDHPNLS 536

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
           +   + + D +    Y      A V++ SAV L+  YCS L SD+Y+   PE+    +E+
Sbjct: 537 EIRNMYNEDKL-EPYYVNGPNSAQVNMTSAVALLCRYCSNLASDKYTTYAPEW---YYEE 592

Query: 928 PGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                +    + LP   P  + + GP   + + A++A  L AC KLH+ G   + LLP K
Sbjct: 593 DSSSAKLRVVIFLPVVCPLIDPIVGPYMHNKKDAKRAAALVACIKLHQCGELDNNLLPWK 652



 Score = 49.7 bits (117), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            K + V  +  + +A S FP  E       Y ++  YY +K+ + ++   QPL+  +G+S 
Sbjct: 870  KMYVVTKVCPDKSALSRFPNHE-------YPNFVSYYSEKHSLSILDPSQPLLLVKGLSE 922

Query: 1307 CKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVE 1366
              N   PR    + ++ +  E L++    +L PEL      P  L   A+ LPSI+ R+ 
Sbjct: 923  RLNAFKPRGAGGKRKKEKMYEELEE----YLIPELVIKQEFPSCLWIQARFLPSILSRLA 978

Query: 1367 SMLLAIQLKDKI 1378
             +L   QL+  I
Sbjct: 979  YLLKLQQLQVDI 990


>gi|195996181|ref|XP_002107959.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
 gi|190588735|gb|EDV28757.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
          Length = 685

 Score =  200 bits (508), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 168/560 (30%), Positives = 267/560 (47%), Gaps = 75/560 (13%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLL------SPRFEHSEEQEGEGEEILD- 1330
            ++  YY++KYG+ +    QPL+R + +S  +N+L        +F      + + + + D 
Sbjct: 108  NFITYYQEKYGIMIKNTTQPLLRPKYLSKKRNMLRSNSGQKSQFSVKSCNKSQTQSVADT 167

Query: 1331 -------KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI--NYP 1381
                   K+  + L PELC     P S+ +    + SI+ R+ESML   + ++K+  ++ 
Sbjct: 168  ITHHSKGKSKVIELIPELCKRSIFPASVWKSLACIRSILWRMESMLSVKEFENKMQESWI 227

Query: 1382 VPASK-------------ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            V +S+             IL+ALT A   + F  E  E LGD+YLK+ VS   FL Y + 
Sbjct: 228  VGSSRNERQLQNNSLTMTILKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKF 287

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDS 1487
            HEGQL+ ++ ++VSN  LYQ  +  GL  YI       +  W  PG       D+   + 
Sbjct: 288  HEGQLSSLKSKIVSNENLYQIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEE 347

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
             L     S+      T K                        L +K +ADV+EAL+G   
Sbjct: 348  QLSTLNLSMTSRVHPTQK------------------------LKNKCIADVMEALLGGIL 383

Query: 1548 VEGGKDAANHLM-KWIGIQVESDPEEVGCPSRPACVPES-VLRSVDFHALEDALKIKFKD 1605
            +E G+++AN+ +   +GI+V      +      A    S +  + +   LE  L   FKD
Sbjct: 384  LELGENSANNFITNNLGIKVGRLSHNIAKLDDDARKEISKIYNAHNLKDLEAVLGYSFKD 443

Query: 1606 RGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
            R LL+ A+THA+    R + GV CYQRLEF+GDA+L +++ +H + +  N  P  L D  
Sbjct: 444  RKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVVRHCYHANNNYKPADLHDFV 503

Query: 1662 AAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-----EVLEELL----KPGFNS 1712
             A++ NE+ A + + + +H +  + S +L  QI   ++     E  E+ L    K    S
Sbjct: 504  EASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQLLQIVDTNEECEQRLSTEEKALVYS 563

Query: 1713 FGLGD-CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM--VTPETLPMHPVR 1769
              L D    PK LGD+ ES+ GAIF+D GR   VV  +   LL P   +  + +P  P+R
Sbjct: 564  NSLKDGVMIPKPLGDLFESLIGAIFIDCGRSIEVVNDLVLRLLQPQHAIFAQGVPKSPIR 623

Query: 1770 ELQERCQQQAEGLEYKASRS 1789
             L E+      GL +K  ++
Sbjct: 624  ILHEKF---PSGLLFKKEKT 640


>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
 gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease dcl2; Includes: RecName:
           Full=ATP-dependent helicase dcl2
 gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
          Length = 1377

 Score =  199 bits (507), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 195/723 (26%), Positives = 316/723 (43%), Gaps = 131/723 (18%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ ++ E + K+N I  ++TG GKT IA+L    I + L+    + L  FL P V 
Sbjct: 15  KPRQYQYEMFEASLKENIIVAMDTGTGKTQIALL---RIAHQLEGGGPRKLTWFLTPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQD---FWDAQR-WQREFDTKQVLVMTAQILLNILR 418
           L  QQ EVIR     V    C   G D    W +Q  W      KQV+V T  +L   L 
Sbjct: 72  LCLQQYEVIRSHLPAVRA--CTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALT 129

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTASPV--- 471
           H  +++  + LLI DE HH +++HP +++M +FYH T     ++  P + G+TASPV   
Sbjct: 130 HGFVRISQLGLLIFDEAHHCMRRHPANMIMLDFYHPTLRKHGRDSVPCILGLTASPVVRS 189

Query: 472 ---NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS 528
               +K + S +D    IC         + T   R EL   +P+  + + E     +L +
Sbjct: 190 KSQEMKTLESNLD---SICKTPQVHKQELTTYAHRPEL---LPIICKAIDEGPGGRALQA 243

Query: 529 LHEQLKQMEV-----AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAA 583
           L       ++     A+ +     +   +++ +  R     E++++              
Sbjct: 244 LEHAWDTADIDGDPDAIPQNGSLLNGSGEYKALMVRKTLCNEQIKR-------------- 289

Query: 584 NLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQE-SYLSKVVSLL 641
             + + R I     ELG+W A Y +  S           +  +D + +E +YLS  +S L
Sbjct: 290 -FVDRSRHI---FAELGEWAADYYICTSVEQLRTTIRDQSLTMDWEDEERAYLSNFLSKL 345

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
                   V++  A + D  N                                       
Sbjct: 346 -------PVAEVQANLADPNN-------------------------------------FT 361

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGH-- 758
           ++PK+ +LI  L K+   E F  +IFV++ V   VL ++ +  P +    + A+ +G   
Sbjct: 362 MSPKLAALINFLDKFDDPE-FSGLIFVKQRVTVSVLARLLSLHPQTRDRFRCAAYVGMSV 420

Query: 759 -NNSQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            +  Q+M        + + T+  FR GR  L+V TSV EEG+D+  C VV+ FD    + 
Sbjct: 421 GSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTTSVLEEGIDVTACRVVVCFDKPANLK 480

Query: 813 AYIQSRGRARKPGSDYILMI----ERGNLSHATFLRNA-----RNSEETLRK-EAIERTD 862
           ++IQ RGRAR+  S Y +M     E G+L     L  A     ++ E  LR+ EA E  D
Sbjct: 481 SFIQRRGRARQQKSTYAIMFSTADEHGDLRRWQILEQAMVEAYQDEERRLREAEAQEAVD 540

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
                        + VP  +  VE+TGAV++ +S V  ++ +C+ LP +RY   RPEF  
Sbjct: 541 -------------ENVPEMI-TVEATGAVITPDSVVTHLYHFCAVLPEERYVDNRPEFSF 586

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDM 981
           E+  +  G  + +  L    +    +++G +   S R A +     A + L+E G   D 
Sbjct: 587 EKDRQ--GLIKGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGLLNDH 644

Query: 982 LLP 984
           LLP
Sbjct: 645 LLP 647



 Score =  143 bits (361), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 194/449 (43%), Gaps = 94/449 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTAASC 1396
            E C +  LP S       +P I+ R+ES L+A +L   I   V  + I   + A+ A S 
Sbjct: 881  ESCTVDKLPVSTAIFGLFIPHIVDRLESTLIANRLCATILCDVGFADIQHVITAIMAPSA 940

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            Q    Y+R E LGD+ LK++VS  LF +     EG LT  R  +V N  L + AL  GL 
Sbjct: 941  QGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLD 1000

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            S+I      P RW AP +       T+ G + +                           
Sbjct: 1001 SFIITKALTPRRWIAPLI------STRVGAAPV--------------------------- 1027

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
                       R +S+K LADV+EALIG  Y++GG   A         +V   P ++   
Sbjct: 1028 ----------KRQMSAKVLADVIEALIGAAYLDGGHSKAQICTHCFLPEVNRQPLDI--- 1074

Query: 1577 SRPACVPES----VLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEF 1631
              P+ + ++      R +    L+  L   FK+  LL+EA+TH S +       YQRLEF
Sbjct: 1075 --PSLITQTEHGRTARHIIDGDLQRHLGYTFKNEDLLIEALTHPSCQHDQTTQSYQRLEF 1132

Query: 1632 VGDAVLDHLITKHLFFSYTN-LPPGRLTDLRAAAVNNENF-------------------- 1670
            +GDA+LD +I   + F Y+N + PG +T ++ A VN                        
Sbjct: 1133 LGDAILDMVIVP-IIFQYSNKISPGDMTLIKHAVVNANLLGFFCMEFSIEQDKTKVEKTP 1191

Query: 1671 -ARVAVKHKL-HVHL----RHGS--------SALDRQIRDFVKEVLEELLK-PGFNSFGL 1715
              R AVK +  HV L    R  S        +ALDR  R    ++L  L   P +    L
Sbjct: 1192 DGRFAVKSETQHVELWRFMRFNSLDLQTSRDAALDRH-RRLRNKILTSLYHGPSYPWQSL 1250

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
                A K   DIVES+ GAI++DSG D S
Sbjct: 1251 SQLYADKFFSDIVESVLGAIYVDSGGDLS 1279


>gi|238497846|ref|XP_002380158.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
 gi|220693432|gb|EED49777.1| RNA helicase/RNAse III, putative [Aspergillus flavus NRRL3357]
          Length = 1339

 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 202/713 (28%), Positives = 321/713 (45%), Gaps = 111/713 (15%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ ++ E + K+N I  ++TG GKT IA+L    I + L+    + L  FL P V 
Sbjct: 15  KPRQYQYEMFEASLKENIIVAMDTGTGKTQIALL---RIAHQLEGGGPQKLTWFLTPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQD---FWDAQR-WQREFDTKQVLVMTAQILLNILR 418
           L  QQ EVIR     V    C   G D    W +Q  W      KQV+V T  +L   L 
Sbjct: 72  LCLQQYEVIRSHLPAVRA--CTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALT 129

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTASPVNLK 474
           H  +++  + LLI DE HH +++HP +++M +FYH T     ++  P + G+TASPV ++
Sbjct: 130 HGFVRISQLGLLIFDEAHHCMRRHPANMIMLDFYHPTLRKHGRDSVPCILGLTASPV-VR 188

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
             S ++        LES LDS+  T +  ++EL  +   P  + + Y KA         L
Sbjct: 189 SKSQEMK------TLESNLDSICKTPQVHKQELTTYAHRPELLPIIY-KAIDEGPGGRAL 241

Query: 534 KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
           + +E A + A       +  Q  G+   G+ E   +   V +   ++     + + R I 
Sbjct: 242 QALEHAWDTADIDGDPDAIPQ-NGSLLNGSGE--YKALMVRKTLCNEQIKRFVDRSRHI- 297

Query: 594 YALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQE-SYLSKVVSLLQCELVEGAVS 651
               ELG+W A Y +  S           +  +D + +E +YLS  +S L        V+
Sbjct: 298 --FAELGEWAADYYICTSVEQLRTTIRDQSLTMDWEDEERAYLSNFLSKL-------PVA 348

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
           +  A + D  N                                       ++PK+ +LI 
Sbjct: 349 EVQANLADPNN-------------------------------------FTMSPKLAALIN 371

Query: 712 ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNS---QEM--- 764
            L K+   E F  +IFV++ V   VL ++ +  P +    + A+ +G +     Q+M   
Sbjct: 372 FLDKFDDPE-FSGLIFVKQRVTVSVLARLLSLHPQTRDRFRCAAYVGMSVGSCRQDMVGD 430

Query: 765 --RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
                + + T+  FR GR  L+V TSV EEG+D+  C VV+ FD    + ++IQ RGRAR
Sbjct: 431 WHNAKKQRGTMDDFRSGRKNLIVTTSVLEEGIDVTACRVVVCFDKPANLKSFIQRRGRAR 490

Query: 823 KPGSDYILMI----ERGNLSHATFLRNA-----RNSEETLRK-EAIERTDLSHLKDTSRL 872
           +  S Y +M     E G+L     L  A     ++ E  LR+ EA E  D          
Sbjct: 491 QQKSTYAIMFSTADEHGDLRRWQILEQAMVEAYQDEERRLREAEAQEAVD---------- 540

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
              + VP  +  VE+TGAV++ +S V  ++ +C+ LP +RY   RPEF  E+  +  G  
Sbjct: 541 ---ENVPEMI-TVEATGAVITPDSVVTHLYHFCAVLPEERYVDNRPEFSFEKDRQ--GLI 594

Query: 933 EYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           + +  L    +    +++G +   S R A +     A + L+E G   D LLP
Sbjct: 595 KGTVILPSCVHPKVRRIQGKLWWKSERAAVKETAFQAYRALYEFGLLNDHLLP 647



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 173/444 (38%), Gaps = 122/444 (27%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTAASC 1396
            E C +  LP S       +P I+ R+ES L+A +L   I   V  + I   + A+ A S 
Sbjct: 881  ESCTVDKLPVSTAIFGLFIPHIVDRLESTLIANRLCATILCDVGFADIQHVITAIMAPSA 940

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            Q    Y+R E LGD+ LK++VS  LF +     EG LT  R  +V N  L + AL  GL 
Sbjct: 941  QGVTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGRTTIVQNPRLTRAALDAGLD 1000

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            S+I      P RW AP +       T+ G + +                           
Sbjct: 1001 SFIITKALTPRRWIAPLI------STRVGAAPV--------------------------- 1027

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
                       R +S+K LADV+EALIG  Y++GG   A         +V   P ++  P
Sbjct: 1028 ----------KRQMSAKVLADVIEALIGAAYLDGGHSKAQICTHCFLPEVNRQPLDI--P 1075

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAV 1636
            S                               L+    H       +      EF+GDA+
Sbjct: 1076 S-------------------------------LITQTEHGRTARQIID-----EFLGDAI 1099

Query: 1637 LDHLITKHLFFSYTN-LPPGRLTDLRAAAVNNENF---------------------ARVA 1674
            LD +I   + F Y+N + PG +T ++ A VN                          R A
Sbjct: 1100 LDMVIVP-IIFQYSNKISPGDMTLIKHAVVNANLLGFFCMEFSIEQDKTKVEKTPDGRFA 1158

Query: 1675 VKHKL-HVHL----RHGS--------SALDRQIRDFVKEVLEELLK-PGFNSFGLGDCKA 1720
            VK +  HV L    R  S        +ALDR  R    ++L  L   P +    L    A
Sbjct: 1159 VKSETQHVELWRFMRFNSLDLQTSRDAALDRH-RRLRNKILTSLYHGPSYPWQSLSQLYA 1217

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTS 1744
             K   DIVES+ GAI++DSG D S
Sbjct: 1218 DKFFSDIVESVLGAIYVDSGGDLS 1241


>gi|170091728|ref|XP_001877086.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164648579|gb|EDR12822.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1358

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 191/643 (29%), Positives = 289/643 (44%), Gaps = 82/643 (12%)

Query: 1247 KRFYVESIRYEMTAESS---FPRKEGYLGPLEYSSYADYYK-QKYGVE-LIFKKQPLIRG 1301
            +R+ V  +R +MT  S     PR+       +Y S  D+ K ++ G E L    QP+I+ 
Sbjct: 702  RRYNVNEVRRDMTPLSKPDDSPREA------DYESLLDFCKARRKGFEGLKDYHQPIIQV 755

Query: 1302 RGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI 1361
              VS  +N L P          +      K    +L PELC    LP S +R A  LPSI
Sbjct: 756  ERVSPVENHLDP--------TSKPLTPPSKAPAKYLIPELCAKFTLPASTLRTALLLPSI 807

Query: 1362 MRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRF 1420
            MRR++ +L+  +L  +  ++ +    +  +L A S    + YER ELLGDA+LK++ + +
Sbjct: 808  MRRIDDLLIVKELNARFFDHAIREDLLHVSLCAPSAGLEYNYERLELLGDAFLKYLCTIY 867

Query: 1421 LFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG--VLP-- 1476
            +F+  P ++EG L   RQ+++SN  L + +   GL  YIQA  F    W  P   + P  
Sbjct: 868  VFVAEPTQNEGSLHIARQKLISNKSLLENSNLIGLPVYIQAKPFPAKSWQPPNFRLTPRT 927

Query: 1477 ---VFDEDTKDGDSSLF---DQEKSVAEDKL------------GTD-KNYNEYEDDDMED 1517
               + D+  ++  + +    +    V E               G D    NE  D +  D
Sbjct: 928  SKMIVDKSDEEAFTPMILGSEMSSDVVEGAFTRTSTACNPHVSGVDLAVINETSDVNERD 987

Query: 1518 GELEG---------DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE- 1567
                G         D  S + L  K +ADVVEA+IG  Y+ GG++ A  + K + I +  
Sbjct: 988  PPFYGKKNKKKARQDEQSSQWLGDKAVADVVEAIIGAAYISGGRETALQVTKALAIPISN 1047

Query: 1568 ----SD-PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
                SD    V  P   A    + LR     A+E  +   F+   LL +A+TH+S     
Sbjct: 1048 INRWSDFGRNVSTPPPDA---SAKLRPESTSAIERIIGHNFQRPHLLAQALTHSSMQGHE 1104

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
             + Y RLEF+GDA+LD ++ +H+F     L PG LT L+ A V+N   A V V   L  H
Sbjct: 1105 SASYGRLEFIGDAILDFMVIQHIFNRDQTLSPGALTLLKGAMVSNSALAAVCVSSGLRKH 1164

Query: 1683 LRHGSSALDRQIRDFVKEVLEELLK-----------PGFNSFGLGDCKAPKVLGDIVESI 1731
            L   S  L   I  +  E+     K           PG   + LG  + PK L D+VESI
Sbjct: 1165 LLFESYQLAGSIEVYANELKARQQKEYLAAEREGRSPG--QYWLG-IEPPKALSDVVESI 1221

Query: 1732 AGAIFLDSGRDT----SVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKAS 1787
             GAI++           +   V +P  D  +T +TL  HP + L E  Q Q   L ++ S
Sbjct: 1222 IGAIYISDDFTPIGAERLFNNVLKPFYDKHITLQTLSHHPTKILFELFQAQGCHL-FEIS 1280

Query: 1788 RSGNL--ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            +  N       V +  V +  A++    +A + A+  AL  L+
Sbjct: 1281 KENNAEKTLCHVLVHEVILASAEDVMPTLAARQASIFALDALQ 1323



 Score = 77.4 bits (189), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 137/310 (44%), Gaps = 41/310 (13%)

Query: 702 VTPKVQSLIKILLKY-QHTEDFRAIIFVERVVAALVLPKVFAEL-PSLSFVKSASLIGHN 759
           VT K + L+ IL+    + + FR IIFV++   ALVL  +F  L   L F++  +L GH+
Sbjct: 203 VTHKFRRLVDILMTCGSYGKGFRGIIFVQKRAIALVLVDLFRNLYHELRFIRPCALFGHS 262

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL--AKTVLAYIQS 817
            S   R    QE    F  G   LLVAT   E+ L+I + ++VIR+DL  ++T  AY ++
Sbjct: 263 FSDFKR---HQEIFHGFVTGEYNLLVATKSTED-LEIPRASMVIRYDLFDSQTSHAYAKA 318

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNS-EETLR--------------------KE 856
           R   R+  S  I M+ERGN  H   L +  N+  + LR                    +E
Sbjct: 319 RTCGRE--SHLIHMVERGNDMHHHILSHIMNAGADILRWTEALYEMANNFAPVPPRDIRE 376

Query: 857 AIE--RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
           +I    +D      T   I+     G +Y  ++T  +    + +    F   +L  D+ S
Sbjct: 377 SINPYHSDSDDEDSTEEYITDPTTSGRIYIQDATTVIYRFTAGLKSTGF---RLEDDK-S 432

Query: 915 ILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHE 974
           +     + E H   G      C + LP     + + G    S   A+++ C  AC++L  
Sbjct: 433 LFD---LKEIHSGFGTTNTLVCSVTLPGTV-IDNISGSPSLSKSQARRSACFEACRELSN 488

Query: 975 MGAFTDMLLP 984
            G     ++P
Sbjct: 489 AGLLDYRMVP 498


>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
 gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
          Length = 1720

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 182/722 (25%), Positives = 323/722 (44%), Gaps = 100/722 (13%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           Q R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  ++    A+F+   
Sbjct: 7   QPRSYQLRLVDHITKNNGIIYLPTGSGKTYVAILALKRFSKDMDKSIEEGGKRAIFMCNT 66

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +R+ +   VG + GE G D W   +W  E    QVLV TAQ++LN++   
Sbjct: 67  VELARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQK 126

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +++ +++++I+DECHH    HPY   M  F         P V G+T   V +KG   ++
Sbjct: 127 YLELSSVSIVIIDECHHGTGHHPYHEFMHLFLLADRNTPLPRVVGLTG--VLIKGNEFKL 184

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEY-DKAASL---WSLHEQL 533
             A K+  LE+   S + T+ D +EL+    +   P E +V Y ++  SL    ++H  +
Sbjct: 185 -VAQKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIHRCI 243

Query: 534 KQMEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
           +   V ++  E  +  +R SK                   G+S   +      +   L  
Sbjct: 244 EHFYVRLDDLEIGKQPTRYSK-------------------GLSTLRDPHKKGYIKTLLND 284

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             Y L   G    Y  A + ++ +   E   +Q +     +++ K +++  C  +   + 
Sbjct: 285 FQYQLENYG---VYAAAMAIVSVILEFEIKLHQSET-LALTHIYK-LAICMCNRINHMLK 339

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
           KK   +VD +    +    E                  + II  +      TPKVQ  + 
Sbjct: 340 KKLRDLVDDDTEPDDAVHTE------------------ETIINFS------TPKVQRFLH 375

Query: 712 ILLKY---QHTEDFRAIIFVERVVAA----LVLPKVFAELPSLSFVKSASLIGHNNSQEM 764
            + K    ++ +D   ++FVER   +     +L K  A +P+L  V     +   NS   
Sbjct: 376 YVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLKKFIAAIPALRDVLVPQFMVGRNSVSA 435

Query: 765 -------RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                  R +Q +  I +FRDG   L+V +SV EEG+D++ CN V+  D  KT   Y+Q+
Sbjct: 436 DCESVLERKWQ-KSAIHQFRDGEANLMVCSSVLEEGIDVKACNYVLILDPIKTFNMYVQT 494

Query: 818 RGRARKPGSDYILMIE-----RGNLSHATFLRNARNSEETLRKEAIERTD--LSHLKDTS 870
           +GRAR   + ++L        + N     + +   +  E L+   ++R +  +  + D  
Sbjct: 495 KGRARSKDAQFVLFSSDLDRIKTNQQINQYRQAHTDIGEYLKDRVLDRAEPLMQEIADHF 554

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM----ERHE 926
                + +P     +   GAV+  +SA+ L+H YC  LPSD +  + P F +    ++ E
Sbjct: 555 H----ELIPPF---INEKGAVLLPSSALILLHRYCQSLPSDAFGFVEPWFTLISWDQKRE 607

Query: 927 KPG--GPTEYSCKLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
             G    ++    ++LP ++    +    P+ +S++ A+ +     C KL+  G   +  
Sbjct: 608 LFGTQAASKEFVSIELPLSSSVRDIFYSDPM-TSVKAAKISAAFKTCIKLYSTGELNERF 666

Query: 983 LP 984
           LP
Sbjct: 667 LP 668



 Score =  174 bits (440), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 232/502 (46%), Gaps = 89/502 (17%)

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERA 1405
            P P SL      LP +M+ V          D I  P    + L A+T A   + +  ERA
Sbjct: 1174 PKPQSL----NVLPVLMKSVSD--------DHIT-PAHQGEFLAAITTAGSADVYDMERA 1220

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            ELLGD++LK   S +L  +YP  +EG LT+++ ++VSN  L        + S I    F 
Sbjct: 1221 ELLGDSFLKMSASLYLASRYPDWNEGTLTQVKSRLVSNKNLMYCLRETDIPSRISCSLFD 1280

Query: 1466 PS-RWAAPGV-LP--VFDEDTKD-------GDSSLFDQEKSVAEDKLGTDKNYNEYED-- 1512
            P   W  P + LP  V D  T+        G  +LFD   S  E+ L    N + Y    
Sbjct: 1281 PRLTWLPPSINLPEDVLDVWTEQPSFAKLIGPHNLFDLALS-DEEILAGRCNEDTYRRFV 1339

Query: 1513 ---DDMEDGELEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKW 1561
                  + G   G   S  V        + +K +AD +EAL+GV     G      ++++
Sbjct: 1340 HGCKSNQQGYYAGRDFSSGVNYFFGEVTVQNKVVADTLEALLGVIVRNYGLQHGFRMLEY 1399

Query: 1562 IGI---QVES------DPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRGLLVE 1611
             GI   +V+       D +      R    P  +   +  H+ LE  L  KF+DRG L++
Sbjct: 1400 FGICKPEVDKPLSQLLDLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQ 1459

Query: 1612 AITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            A+TH S P++ ++ CYQ LEF+GDA+LD LI+ ++F + T L PG LTDLR+A VNN   
Sbjct: 1460 ALTHPSFPTNRLTGCYQELEFIGDAILDFLISAYIFENNTKLRPGELTDLRSALVNNTTL 1519

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVK--------------EVLEE------LLK--- 1707
              + V+HKLH+ +   ++ L   I  FVK               +LEE      +L    
Sbjct: 1520 GCICVRHKLHLFILAENALLSETISKFVKFQESQGHRVTNHVRFLLEERDVQPVILDLDD 1579

Query: 1708 -------------PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
                         P   +F L  +   PK LGD++E++  A+++D  RD    WQ+   L
Sbjct: 1580 EVEMAMENDSEDGPPIGAFNLAQNVDVPKALGDVLEALIAAVYMDC-RDLQTTWQMIYHL 1638

Query: 1754 LDPMVT--PETLPMHPVRELQE 1773
             +P +    + +P+ P+R+L E
Sbjct: 1639 FEPELKEFSQNIPISPIRQLHE 1660



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYG-- 1288
            D EG+IVT   A  + KR  V  +R ++T  S            + +SY ++   KYG  
Sbjct: 881  DYEGKIVTQWYANFASKRMLVHKVRRDLTPSSLMESNH------QNTSYGEFTTSKYGDD 934

Query: 1289 VELIFK-KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
            +E I +  Q LI  R        L+ +     +Q G+          + L PELCF    
Sbjct: 935  IEGIVRMDQFLIEVRE-------LTEQLNFYVQQRGKTSAQSKARVKIILIPELCFNFDF 987

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L   A  LPSI+ R+  ML A  L+ + N
Sbjct: 988  PGDLWIKAMFLPSILNRLHFMLHAEALRQRFN 1019


>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
           bisporus H97]
          Length = 1524

 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 210/766 (27%), Positives = 341/766 (44%), Gaps = 158/766 (20%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A++ +P    R YQ ++LE++ K N I  ++TG+GKT IAVL I+   ++++R+  K  A
Sbjct: 8   AEDNIP--TTRGYQQEMLEESIKHNIIIAMDTGSGKTHIAVLRIK---HEVEREPSKA-A 61

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQIL 413
            F  P V L  QQ  VI+      VG   G +  D W  A+ W+R  +T +V+V T Q+ 
Sbjct: 62  WFFAPTVALCAQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVF 121

Query: 414 LNILRHSIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHT------------TSKEKR 460
           L+ LRH+ I + + I+LL+ DE HHA   HPY+ +M +FYH              S+  R
Sbjct: 122 LDALRHAYIDLGKDISLLVFDEAHHATGDHPYARIM-DFYHRIEERPANLRLYGISQVSR 180

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVE 519
           P V G+TASP+    V    +       LE  LD ++    + R EL + V  P    V 
Sbjct: 181 PYVLGLTASPIYGGDVVKSFNM------LEKNLDCIIRAPRRTRAELAQFVHRPIFQHVM 234

Query: 520 YDK------AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELR--QVY 571
           Y++      + +L  +   ++ ++  +E+     S R K   +        E  R  Q  
Sbjct: 235 YEQWPDAPFSTNLTVISNIVRSLQ--IEKDPYVISLRQK---LATVKPLTSEYFRLDQKL 289

Query: 572 GVSERTESDGAANLIQKL-RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
            ++ RT+       ++   RA +  L +LG W A                          
Sbjct: 290 SITIRTQKTFVFKGLRDFERAASDILLDLGPWAA-------------------------- 323

Query: 631 ESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF--VEGGTNEIEEGEL---LDSHV--- 682
           + Y+ ++                  K  ++ N F  +     + E+  L   LDS V   
Sbjct: 324 DWYVWRIAE----------------KAREAANPFNNIMASWKDTEKSHLLKLLDSAVLTP 367

Query: 683 VSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-----YQHTEDFRAIIFVERVVAALVL 737
           VS GE  D++       G  + K+Q LI+ LL       +  E +  ++FV+R    + L
Sbjct: 368 VSYGEE-DIM-------GDCSDKLQRLIETLLNEKMETEKRDEVYSGLVFVQRRDTVIAL 419

Query: 738 PKVFAELP-SLSFVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVA 786
            +V    P + +  +   L+G ++S    +F            +ET+A+FR G + L++A
Sbjct: 420 AEVLNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLARETQEETMAEFRSGDLNLIIA 479

Query: 787 TSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNA 846
           T+VAEEG+DI+ C  VIR+DL + + ++ QSRGRARK  S + LM   G+          
Sbjct: 480 TAVAEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRSTFTLMFANGS---------- 529

Query: 847 RNSEETLRK-EAIERTDLSHLKDTSR--------LISVDAVPGTVYQVESTGAVVSLNSA 897
              E+ +RK E +ER  +    D +R        L+  D     ++ VEST A  S++SA
Sbjct: 530 -QDEQNVRKWELLERRMVELYNDPARDLAMETESLMDTDDDVDEIFFVESTRASTSVHSA 588

Query: 898 VGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ----LPCNAPF-EKLEGP 952
           +  +  +C+ +P   +  +RP + +   + P  P  +         LP N P+  K+  P
Sbjct: 589 ISHLAHFCAVIPIRAHVDIRPIYEI---DPPDMPLAWHADPHRSNLLPYNGPWGSKVILP 645

Query: 953 VC--------------SSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            C              SS   A + V   A   L++ G   + LLP
Sbjct: 646 RCLPLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLP 691



 Score =  152 bits (384), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 231/522 (44%), Gaps = 72/522 (13%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP------VPASKI 1387
            YV+L PE   I  +  + V  A  LPS++R +E  L    L+  +  P      +P + +
Sbjct: 956  YVYLMPEFTGITLISSTEVEYAFLLPSVLRSLEINLTMASLRSNLFMPSPSLQDIPLALL 1015

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
              A+TA+S  E + Y+R E LGD  LK++V+  + ++YP  HEG LT+ +   V+N+ L 
Sbjct: 1016 SNAMTASSAGEKYNYQRLETLGDTVLKFLVALQVLVEYPLWHEGYLTKKKDHTVANVNLA 1075

Query: 1448 QYALSKGLQSYIQADRFAPSRW---AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
            +  ++  L  +I  +     +W    +  +LP          ++   +EK V E  +  D
Sbjct: 1076 KENINHRLYRWIIKEIMLGRKWRPRYSTKLLP---------PTTPLSEEKIVEELLMVVD 1126

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
            +          +  +   +      LS+K LADVVE+LIG  Y+ GG        K  G+
Sbjct: 1127 EGAELSSKGAAKKKKKSKNQG----LSTKILADVVESLIGAAYIHGGFPLGYECTKLFGL 1182

Query: 1565 QVESDPEEVGCPSRP-----ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-R 1618
             +   P     P R      A  P+  + S  ++ +E  L   FK + LL+EA+THAS +
Sbjct: 1183 GLRWLPP----PERIKDFLGAVEPDKNIPSALYY-VEKMLGYTFKHKVLLLEALTHASYQ 1237

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSY-TNLPPGRLTDLRAAAVNNENFARVAVKH 1677
              +    Y+R+EF+GD+VLD ++T +L+ +   N  PG +   R++ VN    A + +K 
Sbjct: 1238 QDARTVSYERMEFLGDSVLDMVVTDYLYHAPGKNYSPGHIHLRRSSVVNTHFLAYICLKT 1297

Query: 1678 KLHVH-------------------------LRHGSS-ALDRQIRDFVK------EVLEEL 1705
             +                            L H SS  +D Q     +      E+ E L
Sbjct: 1298 SVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTRFKKRREEIEEGL 1357

Query: 1706 LKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVT 1759
            +    F    L   +APK   DI+ES+ GA+FLDS  D      V       P L+ +V 
Sbjct: 1358 MNDTIFPWAALTRLQAPKFFSDIIESVIGAVFLDSNGDIDTARDVITKLGILPTLERIVH 1417

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG 1801
                  HPV  + +   +  + L ++  +   +    V +DG
Sbjct: 1418 DNVDVWHPVSRISQWASKHEKKLGWQFEKERGVVKCSVLVDG 1459


>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
          Length = 1564

 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 47/359 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDG----- 1485
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  +       
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWREKPEFANMIGP 1299

Query: 1486 ----DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------LS 1531
                D +L D+E  V  +   +D  YN + +    +G+    G   S  V        ++
Sbjct: 1300 HNLRDLTLDDEESLVKGN--CSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIA 1357

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACV 1582
            +K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A V
Sbjct: 1358 NKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANV 1416

Query: 1583 PESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD 
Sbjct: 1417 NTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDF 1476

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1477 LISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535



 Score = 43.9 bits (102), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
 gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
          Length = 1666

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 180/718 (25%), Positives = 309/718 (43%), Gaps = 93/718 (12%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPK 360
           + R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   
Sbjct: 18  KPRSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNT 77

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++   
Sbjct: 78  VELARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQK 137

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S   
Sbjct: 138 NMALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK-- 194

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QL 533
             A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+
Sbjct: 195 -VATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQI 253

Query: 534 KQMEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
           KQ  V++E         RRSK      RD+  K  ++Q++                    
Sbjct: 254 KQFFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------D 294

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             Y L E G + A     S +       R    L VK     L    +L  CE +   + 
Sbjct: 295 FVYQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLV 349

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL-- 709
           +K   + D ++G  +    E                  D+I+  +      TPK+Q    
Sbjct: 350 QKLRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLM 385

Query: 710 -IKILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS-- 761
            +K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS  
Sbjct: 386 SLKVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSIS 444

Query: 762 ----QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                 +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q+
Sbjct: 445 PDFGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQT 504

Query: 818 RGRARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           +GRAR P + +++   ER            RNA +      KE +    +  L +  +  
Sbjct: 505 KGRARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHF 564

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK----- 927
                P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+     
Sbjct: 565 QDVIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFG 620

Query: 928 PGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 621 ANAKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 678



 Score =  157 bits (396), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 221/467 (47%), Gaps = 89/467 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1155 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1214

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAPGV-LPVFDEDTKDGDSSLFDQEKS 1495
            VSN  +LY  A   + K L + +   R+    W  P + LP         +     +EK 
Sbjct: 1215 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLP--------HNVLALWREKP 1263

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR------------VLSSKTLADVVEALI 1543
               + +G   N  +   DD E+  ++G+ S  +             +++K +AD +EAL+
Sbjct: 1264 GFANMIGP-HNLRDLALDD-EESLVKGNCSDIKYNRFVNFCVGLVAIANKVIADTLEALL 1321

Query: 1544 GVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACVPESVLRS--VDF 1592
            GV     G   A  ++++  I   SD +         E+G  +  A V  + +    ++ 
Sbjct: 1322 GVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANVNTTEIDGFLINH 1380

Query: 1593 HALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTN 1651
              LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD LI+ ++F + T 
Sbjct: 1381 SHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTK 1440

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK------------ 1699
            + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV             
Sbjct: 1441 MNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVNFQESQGHRVTNY 1500

Query: 1700 ---------------EVLEELLKPGFNS---------------FGLG-DCKAPKVLGDIV 1728
                           ++ +EL  P  N                F +  +   PK LGD++
Sbjct: 1501 VHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVL 1560

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            E++  AI+LD  RD    W+V   L +P +   T  +P++P+R+L E
Sbjct: 1561 EALIAAIYLDC-RDLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1606



 Score = 43.9 bits (102), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 843  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 896

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 897  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 949

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 950  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 980


>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
          Length = 1567

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 181/716 (25%), Positives = 309/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM----ERHEKPG-- 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   +    ER++  G  
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGVN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 182/360 (50%), Gaps = 49/360 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDGDSSL- 1489
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  K G +++ 
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWRE--KPGFANMI 1297

Query: 1490 ---------FDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------L 1530
                      D E+S+ +    +D  YN + +    +G+    G   S  V        +
Sbjct: 1298 GPHNLRDLALDDEESLVKGNC-SDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAI 1356

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPAC 1581
            ++K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A 
Sbjct: 1357 ANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRAN 1415

Query: 1582 VPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
            V  + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
             LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535



 Score = 43.9 bits (102), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
          Length = 1537

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  140 bits (352), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 47/359 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDG----- 1485
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  +       
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWREKPEFANMIGP 1299

Query: 1486 ----DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------LS 1531
                D +L D+E  V  +   +D  YN + +    +G+    G   S  V        ++
Sbjct: 1300 HNLRDLTLDDEESLVKGN--CSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIA 1357

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACV 1582
            +K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A V
Sbjct: 1358 NKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANV 1416

Query: 1583 PESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD 
Sbjct: 1417 NTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDF 1476

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1477 LISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
 gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
          Length = 1714

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  158 bits (399), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 227/480 (47%), Gaps = 95/480 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDGDSSL- 1489
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  K G +++ 
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWRE--KPGFANMI 1297

Query: 1490 ---------FDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------L 1530
                      D E+S+ +    +D  YN + +    +G+    G   S  V        +
Sbjct: 1298 GPHNLRDLALDDEESLVKGNC-SDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAI 1356

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPAC 1581
            ++K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A 
Sbjct: 1357 ANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRAN 1415

Query: 1582 VPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
            V  + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
             LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535

Query: 1699 K---------------------------EVLEELLKPGFNS---------------FGLG 1716
                                        ++ +EL  P  N                F + 
Sbjct: 1536 NFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMS 1595

Query: 1717 -DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
             +   PK LGD++E++  AI+LD  RD    W+V   L +P +   T  +P++P+R+L E
Sbjct: 1596 TNVDVPKTLGDVLEALIAAIYLDC-RDLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
          Length = 1565

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 180/359 (50%), Gaps = 47/359 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDG----- 1485
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  +       
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWREKPEFANMIGP 1299

Query: 1486 ----DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------LS 1531
                D +L D+E  V  +   +D  YN + +    +G+    G   S  V        ++
Sbjct: 1300 HNLRDLTLDDEESLVKGN--CSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIA 1357

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACV 1582
            +K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A V
Sbjct: 1358 NKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANV 1416

Query: 1583 PESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD 
Sbjct: 1417 NTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDF 1476

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1477 LISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
          Length = 1714

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  159 bits (401), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 227/480 (47%), Gaps = 95/480 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLCATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDGDSSL- 1489
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  K G +++ 
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWRE--KPGFANMI 1297

Query: 1490 ---------FDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------L 1530
                      D E+S+ +    +D  YN + +    +G+    G   S  V        +
Sbjct: 1298 GPHNLRDLALDDEESLVKGNC-SDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAI 1356

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPAC 1581
            ++K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A 
Sbjct: 1357 ANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRAN 1415

Query: 1582 VPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
            V  + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD
Sbjct: 1416 VNTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILD 1475

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
             LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV
Sbjct: 1476 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFV 1535

Query: 1699 K---------------------------EVLEELLKPGFNS---------------FGLG 1716
                                        ++ +EL  P  N                F + 
Sbjct: 1536 NFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQEAEQGVPPKGEFNMS 1595

Query: 1717 -DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
             +   PK LGD++E++  AI+LD  RD    W+V   L +P +   T  +P++P+R+L E
Sbjct: 1596 TNVDVPKTLGDVLEALIAAIYLDC-RDLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
          Length = 1807

 Score =  197 bits (501), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 166/533 (31%), Positives = 249/533 (46%), Gaps = 86/533 (16%)

Query: 1380 YPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R 
Sbjct: 1267 HPGPSPSLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRS 1326

Query: 1439 QMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV-------- 1474
            + VSNL LY+    K L   + A +F P   W  P               GV        
Sbjct: 1327 KQVSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPFALWNQA 1386

Query: 1475 -LPVFDE-DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD-DMEDGELEGDSSSYRVLS 1531
             +P     +  + +  + + E+ +   K   DKN ++   + D     +  +  +   + 
Sbjct: 1387 DIPTLQAVNPTEINQLVKETEEKLVIMKSELDKNESKLSCNLDNMRCFIPYNLITQHSIP 1446

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRPAC 1581
             K++AD VEALIG Y +  G   A   M W+GI V          E +PEE    S P  
Sbjct: 1447 DKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEVQIVSEDEPEERIPGSIPYV 1506

Query: 1582 VPES---------------------VLRSVD------------FHALEDALKIKFKDRGL 1608
               S                     +LR +             +  LE ++  KF+D   
Sbjct: 1507 KETSEHGEIVWTQIRYGKLEEPQNPLLRYIPDPEGELCMMLDGYEELEKSIGYKFRDSSY 1566

Query: 1609 LVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A VNN
Sbjct: 1567 LLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNN 1626

Query: 1668 ENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLGDCK 1719
              FA +AV+   H + RH S  L   I  FV+        + EE    G        D +
Sbjct: 1627 TIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEEYYLIGKEECEEAEDVE 1686

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQ 1777
             PK LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+REL E   +
Sbjct: 1687 VPKALGDVFESLAGAIYLDSGMSLDAVWSVYYTIMKSEIEQFSTNVPKSPIRELLELEPE 1746

Query: 1778 QAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
             A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL  LK
Sbjct: 1747 TAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRN--YRIAKCTAAKCALKKLK 1797



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 18/307 (5%)

Query: 750  VKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
            +++   +G++   EM   + +E + +FR     LL+ATS+ EEG+DI +CN V+R+D  K
Sbjct: 330  IRTTDDVGYSRDLEMEHRKQEEVLKRFRIHECNLLIATSILEEGIDIPKCNFVMRYDFPK 389

Query: 810  TVLAYIQSRGRARKPGSDYILMIERGNLSHATF-LRNARNSEETLRKEAIERTDLSHLKD 868
               +Y+Q + RAR   + ++L++ +       + L   +  E+TL  +   + +L+  ++
Sbjct: 390  NYQSYVQCKSRARAIDALHVLLVPQKISKELIWQLAQYQYIEKTLLLKCSNK-ELTEKEE 448

Query: 869  TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
            T   +    +P            V+ NSA+ L++ YC++LPSD ++ L PE+ +E     
Sbjct: 449  TGADMYAAMIPHYKPLDGDDAPKVTFNSAISLVNRYCAKLPSDTFTRLTPEWSIETVNI- 507

Query: 929  GGPTEYSCKLQLPCNAPFEKLEGPVCSSMR-LAQQAVCLAACKKLHEMGAFTDMLLPD-- 985
               T Y+C L+LP N+P + +        R +A++   L  C  LH      D LLP   
Sbjct: 508  NEVTMYTCSLRLPINSPMKYVVTSYPMPNRAMARRMAALQLCIDLHRGNEIDDNLLPIGK 567

Query: 986  ---KGSGEQQEKVDQNDE-----GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGS 1037
               K   E  E     DE      E  PGT + R++Y +  A+ L     + G      S
Sbjct: 568  ENFKAKPEDAEVPALPDESRADFSEARPGTTKRRQYYYKKTAEALTDCRPIVG----VPS 623

Query: 1038 KLFHLFM 1044
             L+H+ M
Sbjct: 624  YLYHINM 630



 Score = 67.4 bits (163), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 27/310 (8%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPKVP 362
           R YQ+++L  AK+KN I  L     +T I + LI+    + +R   K    A++++    
Sbjct: 17  REYQVELLYAAKEKNIIICLGKNFEQTFIVIKLIQEFATNNRRLISKGGKRAIYILNNED 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
               +A  I++ T   V   C  + +DF ++      F++  VLV T ++   ++    +
Sbjct: 77  KCVIKATYIKQLTDLKV-LVCDSVPEDFAES------FESSHVLVGTPKVYTQLISEKKL 129

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
               INL+I+DECH + +      ++  F    +    P + G+     NL     ++  
Sbjct: 130 LPCHINLVIVDECHKSNEDSNLKFILQTFLLCNNV---PRIIGLAVPLFNLTEAPGRL-- 184

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
            ++I  +E+     V T  D   + ++ P P E VVEY K      L+  L+ + +   E
Sbjct: 185 GLEIEKVEATFQCGVETTNDILSIIRYSPKPREYVVEYSKGEK-GDLYNTLENLVLDATE 243

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
                 R  ++      +    E+++++    E+         ++ ++   Y L  LG W
Sbjct: 244 FL----RDHRYDPTEIYNDEFFEDIQKIPDPREKP--------LEMMQDFLYILETLGPW 291

Query: 603 CAYKVAQSFL 612
           CA + A + L
Sbjct: 292 CADRAALALL 301



 Score = 67.4 bits (163), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       YS++ +YY +KY +++   +Q L+     S   
Sbjct: 801  FYVAEICTNLNPKSSFPGDD-------YSTFEEYYLKKYDIQIQNLEQSLLDVDHTSARL 853

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 854  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 911

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 912  CILYRINALLLANQIRCQV 930


>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 1528

 Score =  197 bits (501), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 206/763 (26%), Positives = 339/763 (44%), Gaps = 152/763 (19%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A++ +P    R YQ ++LE++ K N I  ++TG+GKT IAVL I+   ++++R+  K  A
Sbjct: 8   AEDNIP--TTRGYQQEMLEESIKHNIIIAMDTGSGKTHIAVLRIK---HEVEREPSKA-A 61

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQIL 413
            F  P V L  QQ  VI+      VG   G +  D W  A+ W+R  +T +V+V T Q+ 
Sbjct: 62  WFFAPTVALCAQQKAVIQTHLPVSVGLVSGALEPDQWKSAELWERVLNTHRVIVSTPQVF 121

Query: 414 LNILRHSIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHT------------TSKEKR 460
           L+ LRH+ I + + I+LL+ DE HHA   HPY+ +M +FYH              S+  R
Sbjct: 122 LDALRHAYIDLGKDISLLVFDEAHHATGDHPYARIM-DFYHRIEERPANLRLYGISQVSR 180

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVE 519
           P V G+TASP+    V    +       LE  LD ++    + R EL + V  P    V 
Sbjct: 181 PYVLGLTASPIYGGDVVKSFNM------LEKNLDCIIRAPRRTRAELAQFVHRPIFQHVM 234

Query: 520 YDK------AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELR--QVY 571
           Y++      + +L  +   ++ ++  +E+     S R K   +        E  R  Q  
Sbjct: 235 YEQWPDAPFSTNLTVISNIVRSLQ--IEKDPYVISLRQK---LATAKPLTSEYFRLDQKL 289

Query: 572 GVSERTESDGAANLIQKL-RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
            ++ RT+       ++   RA +  L +LG W A                          
Sbjct: 290 SITIRTQKTFVFKGLRDFERAASDILLDLGPWAA-------------------------- 323

Query: 631 ESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF--VEGGTNEIEEGEL---LDSHVVSG 685
           + Y+ ++                  K  ++ N F  +     + E+  L   LDS V++ 
Sbjct: 324 DWYVWRIAE----------------KAREAANPFNNIMASWKDTEKSHLLKLLDSAVLTP 367

Query: 686 GEHVDVIIGAAVADGKVTPKVQSLIKILLK-----YQHTEDFRAIIFVERVVAALVLPKV 740
             + +  I    +D     K+Q LI+ LL       +  E +  ++FV+R    + L +V
Sbjct: 368 VSYGEEDIMCDCSD-----KLQRLIETLLNEKMETEKRDEVYSGLVFVQRRDTVIALAEV 422

Query: 741 FAELP-SLSFVKSASLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSV 789
               P + +  +   L+G ++S    +F            +ET+A+FR G + L++AT+V
Sbjct: 423 LNNHPFTKNIFRIGFLLGTSDSSRRHSFLDISRKLARETQEETMAEFRSGDLNLIIATAV 482

Query: 790 AEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNS 849
           AEEG+DI+ C  VIR+DL + + ++ QSRGRARK  S + LM   G+             
Sbjct: 483 AEEGIDIQACGSVIRWDLPQNMASWAQSRGRARKRRSTFTLMFANGS-----------QD 531

Query: 850 EETLRK-EAIERTDLSHLKDTSR--------LISVDAVPGTVYQVESTGAVVSLNSAVGL 900
           E+ +RK E +ER  +    D +R        L+  D     ++ VEST A  S++SA+  
Sbjct: 532 EQNVRKWELLERRMVELYNDPARDLAMENESLMDTDDDVDEIFFVESTRASTSVHSAISH 591

Query: 901 IHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ----LPCNAPF-EKLEGPVC- 954
           +  +C+ +P   +  +RP + +   + P  P  +         LP N P+  K+  P C 
Sbjct: 592 LAHFCAVIPIRAHVDIRPIYEI---DPPDMPLAWHADPHRSNLLPYNGPWGSKVILPRCL 648

Query: 955 -------------SSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                        SS   A + V   A   L++ G   + LLP
Sbjct: 649 PLACREFSVPMKYSSKVSAHRHVAFEAYVGLYKAGLLNENLLP 691



 Score =  154 bits (388), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 234/522 (44%), Gaps = 72/522 (13%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP------VPASKI 1387
            YV+L PE   I  +  + V  A  LPS++R +E  L    L+  +  P      +P + +
Sbjct: 956  YVYLMPEFTGITLISSTEVEYAFLLPSVLRSLEINLTMASLRSNLFMPSPSLQDIPLALL 1015

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
              A+TA+S  E + Y+R E LGD  LK++V+  + ++YP  HEG LT+ +   V+N+ L 
Sbjct: 1016 SNAMTASSAGEKYNYQRLETLGDTVLKFLVALQVLVEYPLWHEGYLTKKKDHTVANVSLA 1075

Query: 1448 QYALSKGLQSYIQADRFAPSRW---AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
            +  ++  L  +I  +     +W    +  +LP          ++   +EK V E  +  D
Sbjct: 1076 KENINHRLYRWIIKEIMLGRKWRPRYSTKLLP---------PTTPLSEEKIVEELLMVVD 1126

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
                E  +   +    +  +S  + LS+K LADVVE+LIG  Y+ GG        K  G+
Sbjct: 1127 ----EGAELSSKGAARKKKNSKNQGLSTKILADVVESLIGAAYIHGGFPLGYECTKLFGL 1182

Query: 1565 QVESDPEEVGCPSRP-----ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-R 1618
             +   P     P R      A  P+  + S  ++ +E  L   FK + LL+EA+THAS +
Sbjct: 1183 GLRWLPP----PERIKDFLGAVEPDKNIPSALYY-VEKMLGYTFKHKVLLLEALTHASYQ 1237

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSY-TNLPPGRLTDLRAAAVNNENFARVAVKH 1677
              +    Y+R+EF+GD+VLD ++T +L+ +   N  PG +   R++ VN    A + +K 
Sbjct: 1238 QDARTVSYERMEFLGDSVLDMVVTDYLYHAPDKNYSPGHIHLRRSSVVNTHFLAYICLKT 1297

Query: 1678 KLHVH-------------------------LRHGSS-ALDRQIRDFVK------EVLEEL 1705
             +                            L H SS  +D Q     +      E+ E L
Sbjct: 1298 SVKFDALMPRADDEGIELLADAQEVMLWQCLLHSSSRIMDDQANTHTRFKKRREEIEEGL 1357

Query: 1706 LKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVT 1759
            +    F    L   +APK   DI+ES+ GA++LDS  D      V       P L+ +V 
Sbjct: 1358 MNDTIFPWAALTRLQAPKFFSDIIESVLGAVYLDSNGDIGTARDVITKLGILPTLERIVH 1417

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDG 1801
                  HPV  + +   +  + L ++  +   +    V +DG
Sbjct: 1418 DNVDVWHPVSRISQWASKHEKKLGWQFEKERGVVKCSVLVDG 1459


>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
          Length = 1714

 Score =  197 bits (501), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 180/716 (25%), Positives = 308/716 (43%), Gaps = 93/716 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K+N I +L TG+GKT +A+L+++    DL +   +    A+F+   V 
Sbjct: 2   RSYQLRLVDYLTKRNGIVYLPTGSGKTFVAILVLKRFSQDLDKPIASGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQA  +R  T + VG Y GE G D W   +W  E +  QVLV TAQ+ L+++    +
Sbjct: 62  LARQQAVAVRRNTNFKVGFYVGEQGVDEWTRGKWSDEIENNQVLVGTAQVFLDMVTQKNM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +I+++I+DECHH  + HP+   M   +    +   P V G+T   +    +S     
Sbjct: 122 ALNSISVVIIDECHHGTRHHPFREFM-RLFTIADQTNLPRVVGLTGVLIKGNEISK---V 177

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHE----QLKQ 535
           A K+  LE      + T+ D KE+E    +   P+E +V +       ++      Q+KQ
Sbjct: 178 ATKLKELEITYRGNIITVSDTKEIENVMLYATKPTEAMVTFPHQEQGPTVERFIIAQIKQ 237

Query: 536 MEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             V++E         RRSK      RD+  K  ++Q++                      
Sbjct: 238 FFVSLELMNIGVQPVRRSK-SLHCQRDSSKKGFVKQMFN------------------DFV 278

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
           Y L E G + A     S +       R    L VK     L    +L  CE +   + +K
Sbjct: 279 YQLQEYGIYAASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCERIRHLLVQK 333

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---I 710
              + D ++G  +    E                  D+I+  +      TPK+Q     +
Sbjct: 334 LRDMTDDDDGPDDDVNTE------------------DIIMNFS------TPKIQRFLMSL 369

Query: 711 KILLKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSASLIGHNNS---- 761
           K+   ++  +D   ++FVER      +  L+L  + +  P L  V +   +   NS    
Sbjct: 370 KVSFAHKDPKDICCLVFVERRYTCKCIYGLLLNYINST-PELRDVLTPQFMVGRNSISPD 428

Query: 762 --QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               +     +  I KFR+G   L++ +SV EEG+D++ CN V   D  KT   Y+Q++G
Sbjct: 429 FGSVLERKHQKSAIQKFREGNANLMICSSVLEEGIDVQACNHVFILDPLKTFNMYVQTKG 488

Query: 820 RARKPGSDYILMI-ERG---NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           RAR P + +++   ER            RNA +      KE +    +  L +  +    
Sbjct: 489 RARSPEAKFVVFTAERDREKTCQQICQYRNAHDEIAEYLKERVLEEAMPELYEIEKHFQD 548

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEK-----PG 929
              P T       GAV+  ++A+ L+H YC  +P+D +  L P   ++E  E+       
Sbjct: 549 VIKPFT----NEHGAVLLPSNALTLLHRYCQTIPTDAFGFLIPWINLLEEGERNKLFGAN 604

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              ++   + +P N    + +      + R+A+ +    AC  L+ +G  ++  LP
Sbjct: 605 AKDKHVVSINMPLNCILRDTIYSDPMDNARIAKISAAFKACLALYSLGELSEKFLP 660



 Score =  158 bits (399), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 225/479 (46%), Gaps = 93/479 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+TA+S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1183 PAEQGEFLAAITASSATDVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTQVKSKL 1242

Query: 1441 VSNL-VLYQYA---LSKGLQSYIQADRFAPSRWAAP------GVLPVFDEDTKDG----- 1485
            VSN  +LY  A   + K L + +   R+    W  P       VL ++ E  +       
Sbjct: 1243 VSNRNLLYCLADTDIPKKLNTILFTPRYT---WVPPSISLPHNVLALWREKPEFANMIGP 1299

Query: 1486 ----DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE--LEGDSSSYRV--------LS 1531
                D +L D+E  V  +   +D  YN + +    +G+    G   S  V        ++
Sbjct: 1300 HNLRDLALDDEESLVKGN--CSDIKYNRFVEGCRANGQSFYAGSDFSSEVNFCVGLVAIA 1357

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---------EVGCPSRPACV 1582
            +K +AD +EAL+GV     G   A  ++++  I   SD +         E+G  +  A V
Sbjct: 1358 NKVIADTLEALLGVIVKNYGLQHAFKMLEYFKI-CRSDIDKPLTELLNLELGSKNIRANV 1416

Query: 1583 PESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
              + +    ++   LE  L   FKDR  L++A+TH S P++ ++  YQ LEF+GDA+LD 
Sbjct: 1417 NTTEIDGFLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDF 1476

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   +  L   I  FV 
Sbjct: 1477 LISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSETISKFVN 1536

Query: 1700 ---------------------------EVLEELLKPGFNS---------------FGLG- 1716
                                       ++ +EL  P  N                F +  
Sbjct: 1537 FQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCISQKAEQGVPPKGEFNIST 1596

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L +P +   T  +P++P+R+L E
Sbjct: 1597 NVDVPKTLGDVLEALIAAIYLDC-RDLQRTWEVIFRLFEPELQEFTRNMPINPIRQLIE 1654



 Score = 43.5 bits (101), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 1234 DLEGRIVTAAHSG--KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV-- 1289
            D EG+IVT  ++   KR  V  +  E+T  S     +      +  +Y D+   KYG   
Sbjct: 871  DFEGKIVTQWYTNNDKRMLVTKVHRELTPLSFMENNQ------QEKTYYDFTMSKYGNRI 924

Query: 1290 -ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
             +++ K + LI  R        L+ +     +  G+ +        V L PELC     P
Sbjct: 925  GDVVHKDKFLIEVRD-------LTEQLNFYVQNRGKSKAQSKARLKVILIPELCINLEFP 977

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            G L      LPSI+ R+  +L A  L+ + N
Sbjct: 978  GDLWIKLIFLPSILNRMYFLLHAESLRKRFN 1008


>gi|342877213|gb|EGU78706.1| hypothetical protein FOXB_10811 [Fusarium oxysporum Fo5176]
          Length = 927

 Score =  196 bits (498), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 204/786 (25%), Positives = 344/786 (43%), Gaps = 121/786 (15%)

Query: 288  KVGKKSEAKEKMPEE-QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ 346
            K   KS+    +P+  + R YQ ++LEQ+ K+N I  ++TG+GKT +AVL I++   +L+
Sbjct: 52   KAANKSKDASPVPDIIRPRAYQREMLEQSLKRNVIVAMDTGSGKTQVAVLRIQA---ELE 108

Query: 347  RQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQV 405
            R +   L  FL   V L  QQ  VI+ Q   V +    G++  D W  + W R      +
Sbjct: 109  RSSPNKLVWFLGKTVSLCEQQFNVIKRQMPSVPMRLLTGQLNIDAWSPEVWPRILKGTHI 168

Query: 406  LVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSV 463
            +V T  IL + L H+ + M+ + L++ DE H+ VK      +M  FYH         P++
Sbjct: 169  IVSTFSILRDALDHAFVTMDMLALIVFDEVHNCVKNSSGRKIMMNFYHRHKNVGMPVPAI 228

Query: 464  FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEYD- 521
             G+TASP+    +SS +    +I  LE+ +D++  T    R++L KHV  P  + + YD 
Sbjct: 229  LGLTASPI----ISSDLK---EIEKLENTMDAICVTPTTHREQLLKHVNKPHLIRLLYDA 281

Query: 522  -----KAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSER 576
                 +   +  L  +   M++A +          K + + + D   +E+L  V    + 
Sbjct: 282  TKIPPRTPLMQQLQSEYSNMDIAKDPEVL------KLKALVSNDEKKREKLMNVIMKHDT 335

Query: 577  TESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSK 636
                    L  K R I   L ELG W                            + Y+S+
Sbjct: 336  FSQQQIRGLWNKSREI---LAELGSWAV--------------------------DHYISQ 366

Query: 637  VVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAA 696
            ++             K     +D+ + F +  +N  E+   L  H+     ++ V+  + 
Sbjct: 367  MI-------------KTFLDRIDAYSTFTDAWSN--EDRTYLAGHLRRI--NIGVVDNSP 409

Query: 697  VADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASL 755
                 V+ K   LI  LL  ++  D   IIFV+   AA  L ++    P +       ++
Sbjct: 410  PTAQTVSHKTSRLIHELLAAEN--DVVGIIFVKERTAAHTLCELLNNYPPIRDRYHVGAI 467

Query: 756  IGHNNS--QEMRTFQMQ-----ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
            +G ++   Q+ + ++       + +  FR G + LLVATSV EEG+D+  CN+V+ FD  
Sbjct: 468  VGASSYGLQKQKVYEYSSGPGPQVLDDFRSGAINLLVATSVLEEGIDVPACNLVVSFDEI 527

Query: 809  KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKE-AIERTDLSHLK 867
             T+ ++IQ RGRAR   S  I +     LS +T +R     E+ +++    ++ +L+ L 
Sbjct: 528  ATLKSFIQRRGRARMQESKMIAL-----LSSSTDIRAWEELEKGMKERYEDDQRELARLD 582

Query: 868  DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
            + +R   +D+   T Y V++TGA + L++A   +  +C  +    Y    P+++  + E 
Sbjct: 583  EQARAEEIDS---TYYIVKNTGARLDLDNARQHLDRFCQIVFRSDYVGQLPDYVFHKEET 639

Query: 928  PGGPTEYSCKLQLPCNAPFE-KLEGPVC--SSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            P G       + LP   P   +     C   S R A +     A   L+E G  TD L P
Sbjct: 640  PYGGPILRATVTLPGGLPLNLRTFKSACGWKSERNAMRDAAFQAYVALYEAGLVTDNLAP 699

Query: 985  DKGSGEQ-QEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSG---RDGCTGSKLF 1040
                 E+ +EK D                  PE + D     W+      + GC   K F
Sbjct: 700  LNAKSEKVEEKTD----------------LMPEPLFD----PWVQIAQRWKSGC--DKQF 737

Query: 1041 HLFMYT 1046
            +LF +T
Sbjct: 738  YLFEFT 743


>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
 gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1515

 Score =  196 bits (497), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 205/754 (27%), Positives = 332/754 (44%), Gaps = 130/754 (17%)

Query: 274 AGKEANGINQE-CNGKVGKKSEAKEKMPEEQ--------ARPYQLDVLEQAKKKNTIAFL 324
           +GK +N I ++ C+       E ++ + EE+         R YQL++LE++ K N I  +
Sbjct: 68  SGKISNEIVEDLCSSTTESAIENEDAISEEEKGKNVTVTPRTYQLEMLEESLKGNIIVAM 127

Query: 325 ETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYC 383
           +TG+GKT +AVL    I  +L+R     L  FL P V L  Q  E ++     V V    
Sbjct: 128 DTGSGKTHVAVL---RILAELERMEPDKLIWFLAPTVALCTQHNEYLQLNISSVLVKLLV 184

Query: 384 GEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKH 442
           G  G D W  QR W       ++ V   Q+LL+ L H  ++ME ++L+I DE H+ + K 
Sbjct: 185 GSDGVDRWTEQRQWDAILKDVKIAVSPYQVLLDALAHGFVRMERLSLIIFDEAHNCLNKA 244

Query: 443 PYSLVMSEFYHT-TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK 501
           P + +M+ FYH   S    P + G++ASPV      S       +  +E  LD+V  T K
Sbjct: 245 PGAKIMTSFYHPYKSISPLPHILGLSASPVIRSDPQS-------LSKIEETLDAVCRTPK 297

Query: 502 -DRKELEKHVPMPSEVVVEYD---------KAASLWSLHEQLKQME----VAVEEAAQSS 547
             + +L   V +P   ++EY+           ASL  + + L   E    +A++ +    
Sbjct: 298 IHQADLRLRVKLPILSIIEYNPEPEYLMTKTVASLGKVIQDLNISEDPYVLALKSSGSEK 357

Query: 548 SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKV 607
           S+R   + +      ++ ELR +Y   +                    L ELG W A   
Sbjct: 358 SQRELAKLLNNYKTNSQRELRLIYNTGKTI------------------LVELGSWAA--- 396

Query: 608 AQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEG 667
                                  + Y+S VV+             K  K + +   FV  
Sbjct: 397 -----------------------DYYISAVVT-------------KYLKTMKAREVFV-- 418

Query: 668 GTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIF 727
              ++   E L  ++    + V +         K + KV  L+ I+L  Q    F AIIF
Sbjct: 419 -VMDLAATERL--YIAKALKQVGISPSVFSLADKTSDKVAKLLNIIL--QQEPPFSAIIF 473

Query: 728 VERVVAALVLPKVFAELP-SLSFVKSASLIG-HNNSQEMRTF-------QMQETIAKFRD 778
           VE      VL  + ++ P +    K  +++G  +NS+  +         + ++T+++F+ 
Sbjct: 474 VEERATVFVLADLLSQHPLTKERFKIGTMVGSSSNSKRTQIVGELVDLDKQKDTLSRFKL 533

Query: 779 GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN-- 836
           G++ +L+AT+V EEG+D+R CN+VI F     + ++IQ RGRAR+  S  IL+   G   
Sbjct: 534 GKIDILIATNVLEEGIDVRACNLVICFSKPSNLKSFIQRRGRARQQDSKLILLDPLGGKV 593

Query: 837 LSHATFLRNARNSEETLRKEAIERTDLSHLK--DTSRLISVDAVPGTVYQVESTGAVVSL 894
           +      RN R   E       E  +L H+   +T+   S D   G V +VESTGA + L
Sbjct: 594 IDWHELERNMRKMYEN------EMRELQHISEIETADEQSED---GRVLRVESTGAQLDL 644

Query: 895 NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL----E 950
           ++AV  ++ +CS L +  +  LRP+F+   +    G      K+  P + P E L     
Sbjct: 645 DNAVPHLYHFCSVLTAKDFVDLRPDFV---YSFDLGTDFVRAKVIFPLSVP-ETLRVHES 700

Query: 951 GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             V  S + A +     A   L++ G   D LLP
Sbjct: 701 RGVWLSEKGAAKDAAFEAYVALYKGGLVNDNLLP 734



 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 193/447 (43%), Gaps = 80/447 (17%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---I 1387
            K +   LP  +C    +P  LV+    +PSI   +E  L+  +L   I   +  S    +
Sbjct: 960  KQFSCVLPASVCVQDAMPFQLVQFGMMIPSITHHIEVQLIVDRLCKTILKDLEISDRGLV 1019

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
              A+T AS   T  Y+R E LGD+ LK   S  L  +YP   EG L+ M+ ++VSN    
Sbjct: 1020 QTAITHASYSLTSNYQRLEFLGDSILKLCTSVQLISEYPLWPEGYLSAMKDRIVSNSRSS 1079

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+  GL  YI   +F  S+W      P++ ED                          
Sbjct: 1080 RAAVELGLDEYIITKKFTGSKWR-----PMYVEDY------------------------- 1109

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                        L+      R +SSK L+DVVEALIG   V+GG   A   ++    ++ 
Sbjct: 1110 ------------LKTTEQKSRQMSSKVLSDVVEALIGACMVDGGIPKALKSLQLFFPELN 1157

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
              P E    S      + +   +    +E  L   F  + LLVEA+TH S   +G    +
Sbjct: 1158 WLPLETRQMSLYQLAADDLHLPIALQPIEQILAYTFTKKSLLVEAMTHPSY-INGTQSLE 1216

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK----------- 1676
            RLEF+GDA+LD++I   ++   T L   ++  LR+A VN +  A + ++           
Sbjct: 1217 RLEFLGDAILDNIIVTAMWSYETELSHFQMHLLRSALVNADFLAFLCMEMSIEQYVTDLT 1276

Query: 1677 ----HKLH-VH----------LRHGSSALD---RQIRDFVKEVLEELL---KPG--FNSF 1713
                H++H  H          LRH S+      +Q     +E+ EE+L   K G  F   
Sbjct: 1277 EGKDHQIHETHTRRRFSLVNFLRHSSATFSIYQKQALARHQELREEILAVIKTGDKFPWT 1336

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSG 1740
             L    A K   D++ES+ GAI++DSG
Sbjct: 1337 LLSRLDARKFFSDMIESLLGAIWIDSG 1363


>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
          Length = 2324

 Score =  196 bits (497), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 244/536 (45%), Gaps = 99/536 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1781 PSP-SIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1839

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP--------------------------SRWA---A 1471
            VSNL LY+    K     + A +F P                          S W     
Sbjct: 1840 VSNLNLYRLGRRKVFGESMIATKFEPHDNWLPPCYYVPRELEQALVEAGIPASHWNRADI 1899

Query: 1472 PGVLPVFDEDTKD---GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR 1528
            P +LP+  E+  +      + F + K   ED + T     +Y+  D     +  +  +  
Sbjct: 1900 PNLLPLSREEICELVRERCNQFQRCKDCDEDGMPTQSE--DYDSVDKMPCFIPYNLITQH 1957

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES--- 1585
             +  K++AD VEALIG Y +  G   A   M W+GI V    E +   S    VP+    
Sbjct: 1958 SIPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPREEIILKTSSRNAVPKERPV 2017

Query: 1586 --------------------------------VLRSVD------------FHALEDALKI 1601
                                            +LR+V             F   E  ++ 
Sbjct: 2018 GSLKPTFVYEDSDGTAVWKQVRYGTLQSPSSPLLRNVSNPERKLEALLDGFDVFEQKIQY 2077

Query: 1602 KFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            KF+DR  L++++THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDL
Sbjct: 2078 KFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDL 2137

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE---------LLKPGFN 1711
            R+A VNN  FA +AV++  H   RH S  L+  +  FV+ + EE          L     
Sbjct: 2138 RSALVNNTIFASLAVRYGFHKFFRHLSPGLNEVVDRFVR-IQEENGHTISEEYYLIEEEE 2196

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVR 1769
                 D + PK LGD+ ES+AGAIFLDS      VW+V+  ++   +      +P  P+R
Sbjct: 2197 CEEAEDVEVPKALGDVFESVAGAIFLDSNMSLDAVWRVYYRMMKLEIEQFSTNVPKSPIR 2256

Query: 1770 ELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            EL E   + A+  + +    G     +VEV+  G+  G+ +N   ++A+  AA+ A
Sbjct: 2257 ELLELEPETAKFGKPEKLADGRRVRVSVEVFGKGIFKGIGRN--YRIAKCTAAKCA 2310



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 214/517 (41%), Gaps = 117/517 (22%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            I+FVE+   A +L  +  E+           P  +  K A  +      E    + +E +
Sbjct: 669  IVFVEKKFTAKILYHLLNEIRRNDEDYSFVAPQYTVDKEADPLTEPREAENEHRKQEEVL 728

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             +FR     LLV TSV EEG+D+ +CN+VIRFD+     +Y+QS+GRAR P + Y+LMIE
Sbjct: 729  KRFRMRECNLLVGTSVLEEGIDVPKCNLVIRFDVPSMYRSYVQSKGRARAPDAHYLLMIE 788

Query: 834  RGNLSHATFLRNARNSEET----LRKEAIERTDLSHLKDTSRLISV-DAVPGTVYQVEST 888
                    F+ +     E     LRK A +        +  +  +V DA         S+
Sbjct: 789  ESRTEE--FIESLAQYFEIEQLLLRKCANKEPSEEEEMEADKWTNVIDAYSPPASPNHSS 846

Query: 889  GAVVSLNSAVGLIH-----------FYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK 937
               V++++A+GL++            YC++LPSD ++ L P + + + E   G   Y C 
Sbjct: 847  ---VNMSTAIGLVNRYSPSCDAAPGVYCAKLPSDTFTRLSPLWSL-KTEDIDGKIHYICT 902

Query: 938  LQLPCNAP--------------FEKLEG--PVC-----------SSMRLAQQAVCLAACK 970
            ++LP N+P              + + E   P+C            +  LA++   L  C+
Sbjct: 903  VRLPINSPVKHNIVADVKRTLYYVRYETFVPICIVKNDTQGLPMPTRVLARRIAALETCR 962

Query: 971  KLHEMGAFTDMLLP-DKGSGEQQEKVDQ------------NDEGEPLPGTARHREFYPEG 1017
             LH+     D L+P  K      E+ DQ             D  EP PGT + R++Y + 
Sbjct: 963  ILHQARELDDNLMPVGKERFYIHEECDQFCDPDDLEDTASRDSLEPKPGTTKRRQYYYKR 1022

Query: 1018 VADILQ------GE------------WILSGRDGCTGSKLFH-------LFMYTVKCVNN 1052
            +++ L       GE              L       G K++          + T K +  
Sbjct: 1023 ISEALTDCRPAVGEPSFLYNLGMVLTCPLPEEQNTRGRKIYPPEDSLQGFGILTSKTIPK 1082

Query: 1053 GISKDPFLT---------QVSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTP 1103
             I   P  T         ++SD  V+ + E  + + +  N+     +    + ++ Y   
Sbjct: 1083 -ICPFPIFTRSGEVSVKLELSDTNVVLTKEKISMIVTFLNY-----TFTSVLRLQKYLMM 1136

Query: 1104 WDPA---KAYLFVPVVSDKSVDPMNELDWDLVEKITK 1137
            +DP     +Y  VP    K+ D + E+DW+ +E+I K
Sbjct: 1137 FDPQASENSYFIVP-TRKKTKDSLAEVDWEFLERIYK 1172



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 25/314 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R +Q+++L+ AK++N I  L + +G+  IA  LI+   N ++R  +N    +V+LV  + 
Sbjct: 17  REHQVELLDAAKERNIIVCLCSSSGRVFIATKLIQEFSNAIRRPIKNGGKRSVYLVDSMA 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV  QA  I   T   VG Y      +F     W++E   KQVLVMT+++  +I+   I+
Sbjct: 77  LVEHQAAYINNLTDLTVGEY-----SEFSSVTDWEKELMEKQVLVMTSKVCSDIISSGIL 131

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           ++E IN+LILDECH+ ++ HP   +M      +    +P + G+TA   N      +++ 
Sbjct: 132 RIEDINVLILDECHNVLQNHPMRKIMR---WVSLSPIKPRILGLTAPIFNSTADPGRLEG 188

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
            ++   LE+ L S   T  D   + ++   P E V+E         L   L+++ + V  
Sbjct: 189 EMQ--RLEAALLSTAETASDIVSVLRYCIKPKEFVLEC-APHQPGELDNALEEIVIDVLN 245

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
             Q      ++  +   D    EEL+ +         D  ++ ++ L      L  LG W
Sbjct: 246 FIQD----HRYDPLEVYDDEFFEELKDI--------PDPKSDPLKILNEFLDVLHTLGPW 293

Query: 603 CAYKVAQSFLTALQ 616
           CA + A S L  ++
Sbjct: 294 CADRAAFSLLLNVE 307



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +S+FP  E       Y ++ +YY +KY +++  +KQPL+     S   
Sbjct: 1214 FYVAEICSHLNPKSTFPGSE-------YKTFDEYYFKKYNIQIQNEKQPLLDVDHTSARL 1266

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1267 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRKAVCLP 1324

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1325 CILYRINALLLADQIRCQV 1343



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 13/122 (10%)

Query: 1363 RRVESMLLAIQL-KDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLKWVV 1417
            R++E++L    + + KI Y     S +L++LT AS      T CY+R E LGDA L +++
Sbjct: 2059 RKLEALLDGFDVFEQKIQYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLI 2118

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            +R L+    Q   G LT +R  +V+N +    A+  G   +         R  +PG+  V
Sbjct: 2119 TRHLYEDSRQHSPGALTDLRSALVNNTIFASLAVRYGFHKFF--------RHLSPGLNEV 2170

Query: 1478 FD 1479
             D
Sbjct: 2171 VD 2172


>gi|403418950|emb|CCM05650.1| predicted protein [Fibroporia radiculosa]
          Length = 1373

 Score =  196 bits (497), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 255/563 (45%), Gaps = 69/563 (12%)

Query: 1248 RFYVESIRYEMTAESSF---PRKEGYLGPLEY--SSYADYYKQKYGVELIFKKQPL---- 1298
            RFYV  +R +MT  S     PR+  Y   LEY  +   D+   K       +KQPL    
Sbjct: 743  RFYVVRVRRDMTPLSKAIDSPREAEYPSLLEYCKTRIKDFQGLKN------EKQPLLEVA 796

Query: 1299 IRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRL 1358
            +    ++Y   +L P  + S+                +L PELC    +P S  R    +
Sbjct: 797  VAPPAINYLNPVLRPLLQSSKAPPK------------YLIPELCAKFTIPASTFRTMLLV 844

Query: 1359 PSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            PSI+ R++  LL  +L      + +    ++ ALT  S    F YER EL GDA+LK+V 
Sbjct: 845  PSILHRIDHQLLVKELNAHFFQHTILEEHLIAALTPPSASVAFDYERLELFGDAFLKYVA 904

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
            S + F+  P   EG L   RQ+++SN  L   A   GL  YIQ+  F    W  P   P 
Sbjct: 905  SIYCFVTTPHVREGALHMARQKIISNKALLTGANRIGLPPYIQSKPFVAKTWT-PITSPH 963

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLG---TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
               D  + D        +VA D      T K   + +  D ++ +  GD         KT
Sbjct: 964  SSRDPIN-DQKAVHYNDAVAGDTSAIQTTSKRSKKQKQQDEQNIQWLGD---------KT 1013

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWI-----GIQVESDPEEV-GCPSRPACVPESVLR 1588
            +ADVVEA+IG  Y+ GG+  A   MK +     G++  SD   +    + P+ VP   L 
Sbjct: 1014 VADVVEAIIGAAYLSGGQRIALQTMKVLSVNIPGVEQWSDFSRLFTSQTSPSTVP---LP 1070

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            +    A+E  +   F    LL +A+TH S  +     Y RLEFVGDAVLD L+ + ++  
Sbjct: 1071 TATVRAVETIVGNVFARPQLLAQALTHTSIGAHDDRTYDRLEFVGDAVLDFLVVQFIYDR 1130

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE----- 1703
               L P  LT L++A V+N   A   V   LH+HLRH +  +   ++ +V+++ E     
Sbjct: 1131 NPGLSPNGLTLLKSAMVSNHALAAFCVHSGLHIHLRHAAPEVGTAVQVYVRKLGEVREKE 1190

Query: 1704 ------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFL-DSGRDTSV---VWQVFQPL 1753
                  E   PG     L     PK L D+VES+ GA+++ D  ++TSV        +P 
Sbjct: 1191 YRLAQSERRLPGQYWLAL---DPPKTLSDVVESVIGALYISDDFQETSVRAFFDGTIKPF 1247

Query: 1754 LDPMVTPETLPMHPVRELQERCQ 1776
             +  +  ++L  HP   L E  Q
Sbjct: 1248 YEYHIRLQSLCPHPTTTLFELLQ 1270



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 20/312 (6%)

Query: 693 IGAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK 751
           +  A  D  V+PK   L++++      T  FR ++ V+R + A ++ ++  EL + + V+
Sbjct: 227 LDVASDDFNVSPKFLKLVELIETNTSPTNSFRVLVLVKRKIVASMIVELLRELAAFNRVR 286

Query: 752 SASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
           +        +Q M     + T  KF  G   +L+ T  + E +   +C++VIRFDL ++ 
Sbjct: 287 NVRPEAMTQAQYM---DQELTFDKFVRGDTNILLITK-SSEHMTFPKCDIVIRFDLFESQ 342

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK----------EAIERT 861
           L+Y  S           + M+ERGN  H   L +     +  ++           AI   
Sbjct: 343 LSYAASVAHCSNSDGYLVHMVERGNAGHRRVLADITALSDDFQRWLPRLKPGSTGAIPPR 402

Query: 862 DLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFI 921
            L    D     S D  P  + +  +TG +V  + A+ +IH   + L  D        F 
Sbjct: 403 SLHETLDPYWSDSDDDEPSPLIRDPTTGGIVKCSDAITVIHRLAASLQDDHNGFTIEPFF 462

Query: 922 MERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
                + G  T     + LP  +    + GP       + QA C  AC KL + G     
Sbjct: 463 QCAETREGMRT---FTISLPQPSSIRPITGPPRKFPPDSLQAACYLACSKLLDEGMLDYR 519

Query: 982 LLPDK--GSGEQ 991
           + P +   +G Q
Sbjct: 520 MFPQRLLSTGSQ 531


>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
            terrestris]
          Length = 1957

 Score =  196 bits (497), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 172/542 (31%), Positives = 247/542 (45%), Gaps = 98/542 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD +LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1422 PSP-SLILQALTMSNANDGINLERLETIGDXFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1480

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDT---KDGDSSLFDQEKS 1495
            VSNL LY+    K L   + A +F P   W  P   +P   E         S+L++Q   
Sbjct: 1481 VSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIESGVPSTLWNQADI 1540

Query: 1496 VA----------------EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV---------- 1529
             A                E KLG  K      + D  +  L  +  + R           
Sbjct: 1541 PALQAVNPSEITQLVRETEQKLGVMKT-----ELDRNETSLSNNLDNMRCFIPYNLITQH 1595

Query: 1530 -LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSR 1578
             +  K++AD VEALIG Y +  G   A   M W+GI V          ES+P E    S 
Sbjct: 1596 SIPDKSIADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPRERVPGST 1655

Query: 1579 PACV-------------------------------PESVLRSV--DFHALEDALKIKFKD 1605
            P                                  PE  L+ +   +  LE ++  +F D
Sbjct: 1656 PYIKGTNEKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKSIGYEFHD 1715

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
               L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A 
Sbjct: 1716 ISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGALTDLRSAL 1775

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLG 1716
            VNN  FA +AV+   H + RH S  L   I  FV+        + EE    G        
Sbjct: 1776 VNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEEYYLIGEEECEEAE 1835

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQER 1774
            D + PK LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+REL E 
Sbjct: 1836 DVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL 1895

Query: 1775 CQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
              + A+  + +    G     TV+V+  G   G+ +N   ++A+  AA+ AL   K +E 
Sbjct: 1896 EPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRN--YRIAKCTAAKCALK--KAEED 1951

Query: 1833 AE 1834
            AE
Sbjct: 1952 AE 1953



 Score =  115 bits (287), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 204/473 (43%), Gaps = 70/473 (14%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            +IFV +   A VL  +  E+           P  +  ++   I ++   E+   + +E +
Sbjct: 441  VIFVNKAFVAKVLFYLLNEISMHDEDLRFLSPLYTIERNIEDISYSKDLEIEHRKQEEVL 500

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     LL++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR   + Y+L++ 
Sbjct: 501  KRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKTRARATDALYVLLVP 560

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +  +   L      E+TL  +          ++ + + +   +P            V
Sbjct: 561  QEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAA-MIPHYKPLDGDDAPKV 619

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP--FEKLE 950
            + NSA+ L++ YC++LPSD ++ L PE+ ++          Y+C L+LP N+P  +  L 
Sbjct: 620  TFNSAISLVNRYCAKLPSDTFTRLTPEWSIQEMVV-DNKFMYTCSLRLPINSPVKYVVLS 678

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE----- 1000
             P+  +  +A++   L  C  LH      D LLP      K   E  E     DE     
Sbjct: 679  YPM-PNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVDF 737

Query: 1001 GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKC----------- 1049
             E  PGT + R++Y +  A+ L     + G      S L+H+ +  + C           
Sbjct: 738  SEARPGTTKRRQYYYKKTAEALTDCRPIIG----VPSYLYHINL-VLSCPLPEEQNTRGR 792

Query: 1050 ---------VNNGISKDPFLTQVSDFAVLFSS-------ELDAELASLKNFHVRLMSIVL 1093
                     +  GI     + ++  F +   S       +L  +   L    V  ++I L
Sbjct: 793  RIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTIVLNEMQVEKIAIFL 852

Query: 1094 D------VDVEPYTTPWDP---AKAYLFVPVVSDKSVDPMNELDWDLVEKITK 1137
            +      + ++ Y   +DP     +Y+ VPV  D+  D +  +DW+ +E I K
Sbjct: 853  NYTFTNVLRLQQYLMLFDPNASENSYMIVPVKLDEQSDVI--VDWNFLECIYK 903



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       YS++ +YY +KY +++    QPL+     S   
Sbjct: 945  FYVAEICTNLNPKSSFPGDD-------YSTFEEYYLKKYDIQIQNLDQPLLDVDHTSARL 997

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 998  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1055

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1056 CILYRINALLLANQIRCQV 1074



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 123/314 (39%), Gaps = 34/314 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
           R YQ+++   AK ++ I  L     +T I + LI+    +    N+++L+      +F++
Sbjct: 17  REYQVELFYAAKDRDIIVCLGKNYEQTFIVIKLIQEFATN----NRRLLSEGGRRSLFIL 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                   +A  I++ T   V      +  D      +   F+T  VLV T +    +L 
Sbjct: 73  TDEEKCTIKASYIQQLTDLKV------LLCDTCSVTEFIENFETSHVLVTTGKTCAQLLT 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              I    INL+I+DECH ++  +    ++       + E  P + G+     NL     
Sbjct: 127 DRKILPCQINLVIIDECHKSIDNNELKFILQTI---LACENVPRIIGLAVPLFNLTQEPG 183

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
           ++   ++I  +E+     V T  D   + ++ P P E VVEY K      LH  ++   +
Sbjct: 184 RL--GLEIEKVENTFQCEVETASDILSILRYSPKPKEYVVEYAKNEK-GKLHTTIENYIL 240

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
              E            F+        E   + +    +   D      + ++   Y L  
Sbjct: 241 HALE------------FLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLYILET 288

Query: 599 LGQWCAYKVAQSFL 612
           LG WCA + A + L
Sbjct: 289 LGPWCADRAALALL 302


>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
 gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
          Length = 1720

 Score =  195 bits (495), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 181/722 (25%), Positives = 325/722 (45%), Gaps = 100/722 (13%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           Q R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  ++    A+F+   
Sbjct: 7   QPRSYQLRLVDHITKNNGIIYLPTGSGKTYVAILALKRFSKDMDKSIEEGGKRAIFMCNT 66

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +R+ +   VG + GE G D W   +W  E    QVLV TAQ++LN++   
Sbjct: 67  VELARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVGTAQVMLNMVTQK 126

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +++ +++++I+DECHH    HPY   M  F         P V G+T   V +KG   ++
Sbjct: 127 YLELSSVSIVIIDECHHGTGHHPYHEFMHLFLLADRNTPLPRVVGLTG--VLIKGNEFKL 184

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEY-DKAASL---WSLHEQL 533
             A K+  LE+   S + T+ D +EL+    +   P E +V Y ++  SL    ++H  +
Sbjct: 185 -VAQKLRELETTYRSNIITVSDTEELKNVMLYSTKPRECLVTYPNQVGSLEIGHAIHRCI 243

Query: 534 KQMEVAVE--EAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
           +   V ++  E  +  +R SK                   G+S   +      +   L  
Sbjct: 244 EHFYVRLDDLEIGKQPTRYSK-------------------GLSTLRDPHKKGYIKTLLND 284

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             Y L   G    Y  A + ++ +   E   +Q +     +++ K +++  C  +   + 
Sbjct: 285 FQYQLENYG---VYAAAMAIVSVILEFEIKLHQSET-LALTHIYK-LAICMCNRINHMLK 339

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
           KK   +VD +    +    E                  + II  +      TPKVQ  + 
Sbjct: 340 KKLRDLVDDDTEPDDAVHTE------------------ETIINFS------TPKVQRFLH 375

Query: 712 ILLKY---QHTEDFRAIIFVERVVAA----LVLPKVFAELPSLSFVKSAS-LIGHNN--- 760
            + K    ++ +D   ++FVER   +     +L K  A +P+L  V     ++G N+   
Sbjct: 376 YVQKTFSGKNAKDICCLVFVERRYTSKCIYQLLKKFIAAIPALRDVLVPQFMVGRNSVTA 435

Query: 761 ---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
              S   R +Q +  I +F+DG   L+V +SV EEG+D++ CN V+  D  KT   Y+Q+
Sbjct: 436 DCESVLERKWQ-KSAIHQFKDGEANLMVCSSVLEEGIDVKACNYVLILDPIKTFNMYVQT 494

Query: 818 RGRARKPGSDYILMIE-----RGNLSHATFLRNARNSEETLRKEAIERTD--LSHLKDTS 870
           +GRAR   + ++L        + N     + +   +  E L+   ++R +  +  + D  
Sbjct: 495 KGRARSKDAQFVLFSSDLDRIKTNQQINQYRQAHTDIGEYLKDRVLDRAEPLMQEIADHF 554

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM----ERHE 926
                + +P     +   GAV+  +SA+ L+H YC  LPSD +  + P   +    ++ E
Sbjct: 555 H----ELIPPF---INEKGAVLLPSSALILLHRYCQSLPSDAFGFVEPWITLISWDQKRE 607

Query: 927 KPG--GPTEYSCKLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
             G    ++    ++LP ++    +    P+ +S++ A+ +     C KL+  G   +  
Sbjct: 608 LFGTQAASKEFVSIELPLSSSVRDIFYSDPM-TSVKAAKISAAFKTCIKLYSTGELNERF 666

Query: 983 LP 984
           LP
Sbjct: 667 LP 668



 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 226/490 (46%), Gaps = 85/490 (17%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            LP +M+ V          D I  P    + L A+T A   + +  ERAELLGD++LK   
Sbjct: 1182 LPVLMKSVSD--------DHIT-PAHQGEFLAAITTAGSADVYDMERAELLGDSFLKMSA 1232

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGV-L 1475
            S +L  +YP  +EG LT+++ ++VSN  L        + S I    F P   W  P + L
Sbjct: 1233 SLYLASRYPDWNEGTLTQVKSRLVSNKNLMYCLRETDIPSRISCSLFDPRLTWLPPSINL 1292

Query: 1476 P--VFDEDTKD-------GDSSLFDQEKSVAEDKLGTDKNYNEYED-----DDMEDGELE 1521
            P  V D  T+        G  +LFD   S  E+ L    N + Y          + G   
Sbjct: 1293 PEDVLDVWTEQPSFAKLIGPHNLFDLALS-DEEILAGRCNEDTYRRFVHGCKSNQQGYYA 1351

Query: 1522 GDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI---QVES-- 1568
            G   S  V        + +K +AD +EAL+GV     G      ++++ GI    V+   
Sbjct: 1352 GRDFSSGVNYFFGEVTVQNKVMADTLEALLGVIVRNYGLQHGFRMLEYFGICKPDVDKPL 1411

Query: 1569 ----DPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHASRPSSGV 1623
                D +      R    P  +   +  H+ LE  L  KF+DRG L++A+TH S P++ +
Sbjct: 1412 SQLLDLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRL 1471

Query: 1624 S-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
            + CYQ LEF+GDA+LD LI+ ++F +   L PG LTDLR+A VNN     + V+HKLH+ 
Sbjct: 1472 TGCYQELEFIGDAILDFLISAYIFENNNKLRPGELTDLRSALVNNTTLGCICVRHKLHLF 1531

Query: 1683 LRHGSSALDRQIRDFVK--------------EVLEE------LLK--------------- 1707
            +   ++ L   I  FVK               +LEE      +L                
Sbjct: 1532 ILAENALLSETISKFVKFQESQGHRVTNHVRFLLEERDVQPVILDLDEEVEMAMENDSGD 1591

Query: 1708 -PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETL 1763
             P   +F L  +   PK LGD++E++  A+++D  RD    WQ+   L +P +    + +
Sbjct: 1592 GPPIGAFNLAQNVDVPKALGDVLEALIAAVYMDC-RDLQTTWQMIYHLFEPELKEFSQNI 1650

Query: 1764 PMHPVRELQE 1773
            P+ P+R+L E
Sbjct: 1651 PISPIRQLHE 1660



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYG-- 1288
            D EG+IVT   A  + KR  V  +R ++T  S            + +SY ++   KYG  
Sbjct: 881  DYEGKIVTQWYANFASKRMLVHKVRRDLTPSSLMESNH------QNTSYGEFTTSKYGDD 934

Query: 1289 VELIFK-KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
            +E I +  Q LI  R        L+ +     +Q G+          + L PELCF    
Sbjct: 935  IEGIVRMDQFLIEVRE-------LTEQLNFYVQQRGKTSAQSKARVKIILIPELCFNFDF 987

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L   A  LPSI+ R+  ML A  L+ + N
Sbjct: 988  PGDLWIKAMFLPSILNRLHFMLHAEALRQRFN 1019


>gi|226286856|gb|EEH42369.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 1450

 Score =  194 bits (494), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 194/734 (26%), Positives = 327/734 (44%), Gaps = 102/734 (13%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQL++LE + K+N I  ++TG+GKT IA+L IR   ++L+   +  L  FL P V L 
Sbjct: 31   RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIR---HELETCTEDKLVWFLTPTVALA 87

Query: 365  YQQAEVIREQTG-YVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
             QQ + I +Q   Y      G     +W  ++ W       +++V T QILL+ L H  I
Sbjct: 88   DQQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFI 147

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYH-----TTSKEKRPSVFGMTASPVNLKGVS 477
             M  I+LL+ DE HH     P + +M  FYH     T +K   P + G+TASPV      
Sbjct: 148  TMSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRADPE 207

Query: 478  SQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
            S       +  +E  L++   T +  R+EL ++V  P    V++ +  SL  +H  + Q 
Sbjct: 208  S-------LKRVEKNLNARCETPRIHREELMRYVHRPELYTVKF-RTDSL--IHSDMLQN 257

Query: 537  EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
               +         +  W     R    + + + +Y + +R ++   + L + LR      
Sbjct: 258  LSRI--VGTVDIEKDPWIKRLRRQEDRRSQGKLLYALEKR-KTHCLSQLSKLLRQAINVH 314

Query: 597  GELGQWCAYKVAQSFLTALQNDERANYQ-------LDVKFQESYLSKVVSLLQCELVEGA 649
             +LG W A       +  L+  +R  YQ       LD + +E+++ +++S L    V   
Sbjct: 315  DDLGPWAADAFISEVIERLET-KRTMYQHVELHSSLD-REEEAFIFELLSELSISPV--- 369

Query: 650  VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
              K+D    DSE+  V    N + E                                   
Sbjct: 370  --KQDW---DSESNIVSTKVNLLVE----------------------------------- 389

Query: 710  IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQEMRTFQ 768
               LL+ +HT DF  IIF ++     +L  + +  P L   + + + +G +     RT  
Sbjct: 390  ---LLESEHTADFTGIIFAQQRATVTMLSHLISRHPRLKDIIVTGAFLG-DACYASRTST 445

Query: 769  MQE---------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            + E         +I   R G+  LL+ATSV EEG+D+  C++V+ FD  K + ++IQ RG
Sbjct: 446  ITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRSFIQRRG 505

Query: 820  RARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP 879
            RARK  S +++ ++   +S     +     EE +R  +I   D+  L+D     ++    
Sbjct: 506  RARKERSKFVMFLDSDKISEE---KQWTRLEEVMR--SIYEDDMRRLEDVMARENIVEEG 560

Query: 880  GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
                ++ESTGA+++L +A   +  +C+ L    ++  RP FI +  E  G     + K+ 
Sbjct: 561  DQYLRIESTGALLTLENARQHLEHFCATLHY-AFTDSRPHFIFDESEGDGT---IAAKVV 616

Query: 940  LP--CNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            LP   +  F  + G     + ++AQ+     A  KLH  G   D LLP    G++  K++
Sbjct: 617  LPNVLDPKFRVIHGSKRWKTEQMAQRDASFQAYLKLHNEGLVNDYLLPVHWRGDEDPKLE 676

Query: 997  QNDEGEPLPGTARH 1010
              ++   +   +RH
Sbjct: 677  YCEQRPSVVKISRH 690



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 186/442 (42%), Gaps = 83/442 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTAA 1394
            P   C I  LP      +   PSI+ +VE+ L+A +L   I  PV  +    ++ AL A 
Sbjct: 911  PARECSIDKLPLEYTMFSLLCPSIIHKVETFLIAEELNKTILSPVGFTDLNLVITALCAP 970

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  S  L    P  HEG L+  + ++VSN  L   A+  G
Sbjct: 971  DAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETG 1030

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F   +W                                     YN+     
Sbjct: 1031 LDKFIFMDIFTGVKWRP----------------------------------RYNK----- 1051

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                 +E      R +S+KTLADV+EAL+G   ++GG+      +K    ++   P    
Sbjct: 1052 ---AHVEEQDIPRREMSTKTLADVIEALLGAATIDGGRTKVEKCLKIFLPEIRWMPFADR 1108

Query: 1575 CPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +    VPE    L S  F  +E  +   F  +  L +A TH S P S +S YQRLEF+
Sbjct: 1109 FDALYNSVPEVYENLPSSWFRDIESLVGYIFNKKVFLAQAFTHPSNPGSTMS-YQRLEFL 1167

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN-------------------------N 1667
            GD++LDH+I  H+F S  N     +  +RA+  N                         N
Sbjct: 1168 GDSILDHIIVDHIFNSPRNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRN 1227

Query: 1668 ENFARVAV-KHKLHVHLRHGSS----ALDRQIRDFVKEVLEELLKPGFNSFG-----LGD 1717
              F R+   K  L  ++RHG+S       +Q  +  + +  ++ K  + S       L  
Sbjct: 1228 GTFTRMTTRKISLWQYMRHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSR 1287

Query: 1718 CKAPKVLGDIVESIAGAIFLDS 1739
             +A K   D++ES+ GAIF+DS
Sbjct: 1288 LRAQKFFSDLIESVLGAIFIDS 1309


>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
 gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
          Length = 1729

 Score =  194 bits (494), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 181/731 (24%), Positives = 324/731 (44%), Gaps = 118/731 (16%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPK 360
           + R YQ  +++   K N I +L TG+GKT +A+L I+    D+ +  +N    A+F+   
Sbjct: 11  KPRNYQNRLVDHLTKHNGIVYLPTGSGKTFVAILTIKRFSQDMDKPLENGGKRALFMCNT 70

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  ++  T + VG Y GE G D W   +W  E    QVLV TAQ+ L++    
Sbjct: 71  VELARQQAVALKRYTNFKVGFYVGEQGVDEWTRGQWSDEIRNNQVLVGTAQVFLDLFTQM 130

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + + +++++I+DECHH   +HPY   M  F    + +  P V G+T   V LKG +   
Sbjct: 131 HLALSSVSIVIMDECHHGTGRHPYHEFMRLFLCAENHKALPRVVGLTG--VLLKG-NEIN 187

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLW----SLHEQL 533
             A K+  LE+     + T+ D +E+E    +   P E ++ Y     ++    S++ Q+
Sbjct: 188 QVAKKLKELETTYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFMVTQSINSQI 247

Query: 534 KQ-------MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
            Q       M++ V+   +S S +S       RD   K  ++Q++               
Sbjct: 248 TQFFATLDLMDIGVQPVRRSKSLQS------CRDPQKKSSVKQLF--------------- 286

Query: 587 QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
                 N  L +L ++  Y  + + ++ +   +    Q +   Q   L    +L  CE +
Sbjct: 287 ------NDFLFQLQEYGIYAASIAIISLIVEFDLKRRQAET--QSLKLMHRTALSLCEKI 338

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
              + +K   + D ++   +    E                  DVI+  +      TPK+
Sbjct: 339 RHILVQKLRDMTDEDDDPDDKVNTE------------------DVILSFS------TPKM 374

Query: 707 QSLIKILLKY---QHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIG 757
           Q  ++ L K    +  +D   ++FVER      +  L+L       P L  V +   ++G
Sbjct: 375 QRFLQYLKKTFANKDHKDISCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVG 433

Query: 758 HNN-SQE----MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            N  SQ+    M     +  I KFR+G   L++ +SV EEG+D++ CN V+  D  KT  
Sbjct: 434 RNTISQDFEGVMDRKNQKAAIQKFREGEANLMICSSVLEEGIDVQACNYVLILDPLKTFN 493

Query: 813 AYIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD----- 862
            Y+Q++GRAR P + ++L    +E   +S         ++E  E L+   +ER +     
Sbjct: 494 MYVQTKGRARSPNASFVLFASELEETKISKQISQYRTAHAEIAEYLKYRVLERFEPEMYE 553

Query: 863 -LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFI 921
              H +D  +             +   GAV+  ++A+ L+H YC  +P+D +  + P   
Sbjct: 554 VKQHFQDVIQPF-----------INKHGAVLLPSAALILLHRYCQTMPTDAFGFVIPWIN 602

Query: 922 MERHEK------PGGPTEYSCKLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLH 973
           + + ++          ++Y   ++LP N+  + +    P+  + + A+ +    ACK L+
Sbjct: 603 LLQEDECIRLYGDCARSKYVVSIKLPLNSRLKDIIYSDPM-DNAKEAKMSAAFNACKLLY 661

Query: 974 EMGAFTDMLLP 984
            +G   +  LP
Sbjct: 662 NLGELNERFLP 672



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 217/478 (45%), Gaps = 89/478 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++   + +  ER E+LGD++LK   + +L  KY   +EG LT+++  +
Sbjct: 1196 PAEQGEFLAAITSSGTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGSLTQVKSML 1255

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS-RWAAP------GVLPVFDEDTK----DGDSSL 1489
            VSN  L        +   I    F P   W  P       VL ++ E+ +     G  +L
Sbjct: 1256 VSNRNLLYCLRDTDIPKKISTVLFTPRYTWLPPSISLPHNVLTLWRENPELANMIGPHNL 1315

Query: 1490 FD----QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV----------LSSKTL 1535
             D    +E+S+ +     D NY  + +    + +     + +            +  K +
Sbjct: 1316 RDLALGEEESMVKGYCN-DINYKSFVEGCRANAQSHHAGADFSAEVNFCVGLVSIPDKVI 1374

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPESVL 1587
            AD +EAL+GV     G   A  ++++  I          +    E+G     A V  + +
Sbjct: 1375 ADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNSTEI 1434

Query: 1588 RS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
                ++ + LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+ +
Sbjct: 1435 DGFLINHYHLENNLGYTFKDRGYLLQALTHPSYPTNRITGCYQELEFIGDAILDFLISVY 1494

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF------- 1697
            +F + TN+ PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F       
Sbjct: 1495 IFENNTNMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAMLAESISKFVHFQESQ 1554

Query: 1698 -------VKEVLEEL-LKPGFNSFGLGD-------------------------------- 1717
                   V+ +LEE  ++P   S  L D                                
Sbjct: 1555 RHRVTNHVRILLEEADVQP--TSLDLDDYLDMTELNNALKSISQEEQNDQPRGEFNMSTN 1612

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQE 1773
               PK LGD++E++  AI+LD  RD    W+V   L  P +      +P++P+R+L E
Sbjct: 1613 VDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELQEFARNVPINPIRQLME 1669



 Score = 45.1 bits (105), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IVT   A    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 883  DFEGKIVTQWYANFETKRMVVTKVHRELTPLSFMEKNH------QDKTYYEFTMSKYGNH 936

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + LI  R ++   N        S  Q     +I+       L PELCF +  
Sbjct: 937  IGDVVHKDKFLIEVRELTDQLNFYVQNRGKSSAQSKARAKII-------LIPELCFNYEF 989

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+ R+  +L A  L+ + N
Sbjct: 990  PGDLWLKLIFLPSILNRMHFLLHAEALRKRFN 1021


>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
          Length = 1719

 Score =  194 bits (494), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 182/728 (25%), Positives = 316/728 (43%), Gaps = 116/728 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y GE G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGEQGVDXWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S +S+      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQSQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTDLSHLKD 868
           Y+Q++GRAR   ++++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNANFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTE------ 537

Query: 869 TSRLISVDAVPGTVYQ--VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF--IMER 924
              +  V      V Q  +   GAV+  +SA+ L+H YC  +P+D +  + P    + E 
Sbjct: 538 -PEMYXVKQXFQDVIQPFINEHGAVLLPSSALILLHRYCQSMPTDAFGFVIPXXNSLQED 596

Query: 925 HEK----PGGPTEYSCKLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKKLHEMG 976
             K        ++    +QLP N+   KL+  + S    S++ A+ +    ACK L+++G
Sbjct: 597 QRKILFGDCARSKEVVSIQLPLNS---KLKDTIYSDPMDSVKAAKVSAAFKACKLLYQLG 653

Query: 977 AFTDMLLP 984
              +  LP
Sbjct: 654 ELNERFLP 661



 Score =  157 bits (398), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 220/479 (45%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+           
Sbjct: 1245 VSNRNLL-YCLSDTDIPKXISTILFTPRYTWLPPSISLPHNVLALWRENPXLAGMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV----------LSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNSFVEGCRANAQTHHAGADFSTEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNYPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELQEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKSRAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|357118011|ref|XP_003560753.1| PREDICTED: ribonuclease 3-like protein 3-like [Brachypodium
            distachyon]
          Length = 296

 Score =  194 bits (493), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/243 (48%), Positives = 154/243 (63%), Gaps = 10/243 (4%)

Query: 1591 DFHALEDALKIKFKDRGLLVEAITHASR--P-SSGVSCYQRLEFVGDAVLDHLITKHLFF 1647
            D  A+E  L  +F D+ L+ EA+TH S   P   G S Y+RLE++GD VL  L+++ +F 
Sbjct: 37   DVAAVETLLGYEFGDKSLVGEALTHGSYYYPYPPGDSTYERLEYLGDGVLTCLMSREVFL 96

Query: 1648 SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK 1707
            +Y +LPPG LT LRAA V+ E  ARVAV+H +H  LRH +  LD QI DF+KE    L K
Sbjct: 97   TYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLRHKAPQLDGQIDDFIKE----LCK 152

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHP 1767
              ++S GL D  APKVL DIVES+ GAI+LDS  +  VVW+VF+ L DP+++ ETL  HP
Sbjct: 153  YKYHSNGLLD--APKVLSDIVESLIGAIYLDSNFNQEVVWRVFRNLADPLISLETLGKHP 210

Query: 1768 VRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNALAV 1826
            V EL E CQ+   GL++          V+V +DG  +G A   QKK +AQ  AA+ AL  
Sbjct: 211  VSELLEFCQKTRRGLQFVKDGWDKHLKVDVLVDGELLGTATYAQKKEIAQNRAAKAALDK 270

Query: 1827 LKE 1829
            LKE
Sbjct: 271  LKE 273



 Score = 42.0 bits (97), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 13/107 (12%)

Query: 1359 PSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETF-----CYERAELLGDAYL 1413
            P  +  VE+ LL  +  DK       S + EALT  S    +      YER E LGD  L
Sbjct: 35   PEDVAAVET-LLGYEFGDK-------SLVGEALTHGSYYYPYPPGDSTYERLEYLGDGVL 86

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
              ++SR +FL Y     G LTR+R   V    L + A+  G+  +++
Sbjct: 87   TCLMSREVFLTYRSLPPGPLTRLRAANVDKEKLARVAVEHGIHRFLR 133


>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
 gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
          Length = 1468

 Score =  194 bits (493), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 193/767 (25%), Positives = 351/767 (45%), Gaps = 108/767 (14%)

Query: 273 RAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTL 332
           R+   +NG+ Q    +       ++ +   + R YQ ++LE + K+N I  ++TG+GKT 
Sbjct: 26  RSSSGSNGMPQNEAARKASLEGLEDALGSIRPRGYQREMLEASIKQNIIVAMDTGSGKTQ 85

Query: 333 IAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFW 391
           IA+L IR   ++L+R +   L  FL P+VPL  QQ   I EQ   Y      G    + W
Sbjct: 86  IAILRIR---HELERCSNDKLVWFLAPRVPLAEQQYRAISEQLPAYQTKILTGADNLERW 142

Query: 392 DAQR-WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 450
             Q+ W       +++V T QILL++L +  I +  I LL+ DE HH VK  P + +M  
Sbjct: 143 STQQIWDAFLLNTRIVVSTPQILLDVLSNGFITLRRIALLVFDEAHHCVKASPENKIMRN 202

Query: 451 FYHT-----TSKEKRPSVFGMTASPVNL---KGVSSQVDCAIKICN--LESKLDSVVCTI 500
           FYH      +     PS+ G+TASP +      +S Q +C++ + +  LE  LD+   T 
Sbjct: 203 FYHARIDQLSETNDLPSILGLTASPTSKLIEDSLSRQCECSLLMESRQLEQNLDAFCKTP 262

Query: 501 K-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGAR 559
              R+E+ ++V +P    + Y K  S+   + ++K + +  +   +S     +++  G  
Sbjct: 263 AIHREEMMQYVHIPELRKISYQK-DSIIPHNMKVKFLHMLDDIDIESDPFFQRYK--GKT 319

Query: 560 DAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDE 619
           D+ + E  R +  ++ +T   G   L +    +++  GELG W     + +F++ +    
Sbjct: 320 DSKSTE--RFLRALARKTP--GLDQLKRCFTKVSHMYGELGHW----ASSAFISEIYRRT 371

Query: 620 RANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLD 679
           R                               ++ AK+VD  + + E   ++        
Sbjct: 372 R-------------------------------EERAKLVD--HSWSEWDRDD-------S 391

Query: 680 SHVVSGGEHVDVIIGAAVADGK---VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALV 736
           S + +  E V  I+G    +     V+ KV+ L+  LL  + T   R IIFVE+   A++
Sbjct: 392 SFMCNALEPVVAIMGERCWNSTPDAVSQKVEHLVD-LLSSELTGSSRGIIFVEQRATAVM 450

Query: 737 LPKVFAELPSLSFVKSASLIGHNN--------SQEMRTFQMQETIAKFRDGRVTLLVATS 788
           L  + +  P L+ +KS   +G++         ++  +   M+ +I   + G+  LLVATS
Sbjct: 451 LSHLISRYPELAHIKSDYFLGNSAFSARKADLTELSKPGDMKNSIDDLKSGKKNLLVATS 510

Query: 789 VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL------------------ 830
           V EEG+D+  C++V+ FD  K + +++Q RGRARK  S +++                  
Sbjct: 511 VLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAEDDTATYKDWEAMED 570

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
           +++   LS+  F+   R  ++    E    R + +    T  L+  D +    Y V    
Sbjct: 571 IMKERYLSNKEFIDRLREEDDEEEVEYESLRIESTGYGVTPGLLLWDCLLTIYYTVR--- 627

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC--NAPFE 947
           A+++L +A   +  +CS +P + ++  +P+FI+    K G     + K+ LP   +  F 
Sbjct: 628 ALLTLENARAHLSHFCSTIPCE-FTDTQPDFII---SKTGIKDMLTAKVLLPTVLDLQFR 683

Query: 948 KLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
           + EG       ++A++     A  +L++     D L+P+      +E
Sbjct: 684 EFEGIQAWKREKMAKRDAAFQAYLQLYKASLVNDHLMPEHCRTTDEE 730



 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 201/448 (44%), Gaps = 90/448 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTA 1393
            +P     I  LP    + A  +PS++  +   LLA +L   I  P+    I   L A+TA
Sbjct: 964  IPARQSCISMLPVGFAKFALFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQLVLTAITA 1023

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S +E   Y+R E LGD+ LK   S  L  ++P  HEG L++ +  +VSN  L++ A+  
Sbjct: 1024 TSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDT 1083

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W      P+++                            + Y ++
Sbjct: 1084 GLDQFILTTCFTGAKWR-----PLYN----------------------------STYTNN 1110

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
              + GE      S R LS+KTLADVVE+LIGV  ++GG++     ++    ++   P   
Sbjct: 1111 AGKIGE-----KSTRKLSTKTLADVVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGE 1165

Query: 1572 --EVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCY 1626
              E+   S P      P  +L  +     E  +   F  + LL  +++H S P SG++ Y
Sbjct: 1166 RIEILYDSAPDFNDDCPRDILSKI-----EPLIDYSFTKKALLAASLSHPSNPISGMT-Y 1219

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH--------- 1677
            QRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +           
Sbjct: 1220 QRLEFLGDSILDNIVTRALFRCKREIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDV 1279

Query: 1678 -----------------KLHVHLRHGSS-------ALDRQIRDFVKEVLEELLKPG--FN 1711
                              L  ++ H S+       A+ R   + +++ +E  L+ G  + 
Sbjct: 1280 CVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMARTFEE-LRDQIENALRSGARYP 1338

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
               L    APK   DI+ESI GAIF+DS
Sbjct: 1339 WTLLSTLNAPKFFSDIIESILGAIFIDS 1366


>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
          Length = 1453

 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 186/714 (26%), Positives = 323/714 (45%), Gaps = 113/714 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           +R YQL++  ++ ++N I  ++TG+GKT +AVL I++   +L+R   + +  FL P V L
Sbjct: 70  SRAYQLEMFAESMRQNIIVAMDTGSGKTQVAVLRIKA---ELERTATEQIVWFLAPTVSL 126

Query: 364 VYQQAEVIREQTGYV-VGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
             QQ  V++ Q   V +    G+   D W D   W       +++V T QILL+ L H+ 
Sbjct: 127 CAQQLAVLKSQIPAVQIKFLSGDDNVDSWSDQAVWDAVLLNVRIVVSTYQILLDALSHAF 186

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNLKGVSSQ 479
           ++ME ++L++ DE H+ V K P S +M+ FYH   +++R  P + G+TASP     V S 
Sbjct: 187 VRMERLSLIVFDEAHNCVGKSPGSKIMTNFYHPHKRDERRVPHIMGLTASPTFGSKVES- 245

Query: 480 VDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVE------YDKAASLWSLHEQ 532
                 I  LES LD+V  T    R +L   V  P    VE      Y    SL +L   
Sbjct: 246 ------INVLESTLDAVCKTPTMHRDDLLACVKKPELTFVEFLPKPDYRTPKSLQTLRNA 299

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
           ++ ++++ +              +  +  G     R+++ V E  ++     +    R  
Sbjct: 300 IRSLDISEDPFV-----------LHLQAEGTDRSKRELFAVLESHDTYVHNQMTSFGRQA 348

Query: 593 NYALGELGQWCA----YKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELV 646
           N    ELG W A    ++V   F +A+++  R    ++ D   ++ YL K++  ++C   
Sbjct: 349 NQICRELGPWAAEYYIWEVITRFDSAVRSQSRWLEAWKED---EKKYLGKILGQIECRRP 405

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
                 +D   V SE  F+                                         
Sbjct: 406 SPTEISRD---VLSEKVFI----------------------------------------- 421

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQEM- 764
             LI+ L  +Q   D   I+F +      VL  +     +L +  +  +++G +  Q   
Sbjct: 422 --LIEQL--FQDKVDITGIVFAKERATVAVLGHLLTSHEALRAKYRVGAMMGTSQYQARK 477

Query: 765 -------RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                  RT  +Q ++ +FR G++ LL+ATSV EEG+D+  CN+VI FD    + ++IQ 
Sbjct: 478 RDIWDLSRTEDLQ-SLHQFRSGKINLLIATSVLEEGIDVPACNLVICFDRPPNLKSFIQR 536

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISV 875
           RGRAR   S  +++++R      TF +   + E  +++  E  ER +L HL+   ++   
Sbjct: 537 RGRARMRDSKLLMLLDRSE----TFSQEWESMEAEMKRQYEQQER-ELEHLQ---QIEEA 588

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
           + +    + VE+TGA++ L+ A   +  +C  L    +   RP++I+++ +    P +  
Sbjct: 589 EELADMQFNVETTGALLDLDIAKSHLDHFCRILSPGEFIDWRPDYILKKLDNTDAP-DLR 647

Query: 936 CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACK---KLHEMGAFTDMLLPDK 986
             + LP   P E       S+ +  + A+  AA +    L+  G   D LLP K
Sbjct: 648 YTVVLPSYLPAEVRSAESKSTWKSEKNAMKDAAFQAYVALYRAGLVNDNLLPFK 701



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 235/579 (40%), Gaps = 123/579 (21%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPA---SKI 1387
            K Y    P  +  +  +P         +PSI+ R+E+ L+A +L   +  P+     S +
Sbjct: 920  KPYSRVYPVPMAKVDAIPAKYAHFGVLIPSILHRIETCLVAKELSTTLLRPLAIDDWSLV 979

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
              A++A S  E   YER E LGD+ LK+  +  +    P   E  L+  +  +V+N  L 
Sbjct: 980  HTAISAGSAAEPTNYERLEFLGDSILKFSATINVAALNPDWPERLLSFKKDSIVANSTLC 1039

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+  GL  +I    F   +W      P++ ED                          
Sbjct: 1040 KAAIKHGLDRFILTKPFTGQKWR-----PIYVEDVLK----------------------- 1071

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA-----------N 1556
                          G+ +S R +S+KTLAD+VEALIG   ++GG+D              
Sbjct: 1072 -------------RGEDTSTRRISTKTLADIVEALIGASMIDGGEDGGLSKALDCMSIFL 1118

Query: 1557 HLMKWIGI----QVESD--PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
              +KW  I    Q+  D  P+ V  PS                 LE+ +   F  + LL+
Sbjct: 1119 QQIKWRRIDDCRQLLYDVAPDNVELPST-------------LKPLEELIGYDFDKKSLLI 1165

Query: 1611 EAITHASRP-SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            +++THAS    + + C +RLEF+GDAVLD++I   LF    +L    +  L+ A VN + 
Sbjct: 1166 QSMTHASSNFGNPLGCLERLEFIGDAVLDYIIVNRLFSIRPHLSHQSMHLLKTAVVNGDF 1225

Query: 1670 FARVAVKHK--------------------------LHVHLRHGSSALD-RQIRDFVKEVL 1702
               ++++                            L   +RH SSA+   QI   +++  
Sbjct: 1226 LGFLSLEQSVEQEEVVIGEIRDKVPELKRSRFTLPLWKFMRHQSSAVGLEQIN--IEKRH 1283

Query: 1703 EELLKPGFNSFG---------LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
             E+  P  ++           L   +  K   DI ES+ GA+++D+G D  V  QV +  
Sbjct: 1284 AEMRGPIIDAMEHGATYPWALLARLQLRKFYSDIFESLLGAVWVDAG-DMKVCEQVVERF 1342

Query: 1754 -----LDPMVTPETLPMHPVRELQERCQQQAEG--LEYK--ASRSGNLATVEVYIDGVQV 1804
                 LD ++      +HP  EL     +++    L YK   +R   L+   +      V
Sbjct: 1343 GILGCLDRILRDGVHCLHPKEELGHLADKESVQYVLSYKELENRERELSCKVMVGTRCVV 1402

Query: 1805 GVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENG 1843
             V +   K   +  AA  A+ +LK ++  +   + D +G
Sbjct: 1403 EVDKGVTKDEVKVKAAEAAVRILKAEKMQKMAAQKDPDG 1441


>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
          Length = 1934

 Score =  194 bits (492), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 236/517 (45%), Gaps = 94/517 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  Y   HEG+L+ +R + 
Sbjct: 1397 PSP-SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQ 1455

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV-LPVFDEDT--KDG-DSSLFDQEKS 1495
            VSNL LY+    K L   + A +F P   W  P   +P   E    K G  S+L++Q   
Sbjct: 1456 VSNLNLYRLGRQKMLGESMIATKFEPHDNWLPPCYYVPKELEQALIKSGVPSTLWNQADI 1515

Query: 1496 VA----------------EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV---------- 1529
             A                E KLG  K      + D  +  L  +  + R           
Sbjct: 1516 PALQAVNPSEITQLVRETEQKLGVMKT-----ELDRNETSLSNNLDNVRCFIPYNLITQH 1570

Query: 1530 -LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSR 1578
             +  K++AD VEALIG Y +  G   A   M W+GI V          ES+P E    S 
Sbjct: 1571 SIPDKSIADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPRERVPGST 1630

Query: 1579 PACV-------------------------------PESVLRSV--DFHALEDALKIKFKD 1605
            P                                  PE  L+ +   +  LE ++  +F D
Sbjct: 1631 PYIKGTNEKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKSIGYEFHD 1690

Query: 1606 RGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
               L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A 
Sbjct: 1691 ISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDGRQHSPGALTDLRSAL 1750

Query: 1665 VNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG-FNSFGLG 1716
            VNN  FA +AV+   H + RH S  L   I  FV+        + EE    G        
Sbjct: 1751 VNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQQENGHSISEEYYLIGEEECEEAE 1810

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQER 1774
            D + PK LGD+ ES+AGAI+LDSG     VW V+  ++   +      +P  P+REL E 
Sbjct: 1811 DVEVPKALGDVFESLAGAIYLDSGMSLDAVWSVYYAIMKNEIEQFSTNVPKSPIRELLEL 1870

Query: 1775 CQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQN 1809
              + A+  + +    G     TV+V+  G   G+ +N
Sbjct: 1871 EPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRN 1907



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 204/473 (43%), Gaps = 70/473 (14%)

Query: 725  IIFVERVVAALVLPKVFAEL-----------PSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            +IFV +   A VL  +  E+           P  +  ++   I ++   E+   + +E +
Sbjct: 416  VIFVNKAFVAKVLFYLLNEISMHDKDLHFLSPLYTIERNIEDISYSKDLEIEHRKQEEVL 475

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI- 832
             +FR     LL++TS+ EEG+DI +CN V+R+D  KT  +Y+Q + RAR   + Y+L++ 
Sbjct: 476  KRFRIHECNLLISTSILEEGIDIPKCNFVMRYDFPKTYQSYVQCKSRARATDALYVLLVP 535

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
            +  +  +   L      E+TL  +          ++ + + +   +P            V
Sbjct: 536  QEMSKEYIWQLAQYHYIEKTLLVKCSNNEPSEEEENEADMYAA-MIPHYKPLDGDNAPKV 594

Query: 893  SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP--FEKLE 950
            + NSA+ L++ YC++LPSD ++ L PE+ + R         Y+C L+LP N+P  +  L 
Sbjct: 595  TFNSAISLVNRYCAKLPSDTFTRLTPEWSI-REMIVDNKFMYTCSLRLPINSPVKYVVLS 653

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQEKVDQNDE----- 1000
             P+  +  +A++   L  C  LH      D LLP      K   E  E     DE     
Sbjct: 654  YPM-PNRAMARRMAALQLCIDLHRKNEIDDNLLPIGKENFKAKPEDAEVPALPDESKVNF 712

Query: 1001 GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKC----------- 1049
             E  PGT + R++Y +  A+ L     + G      S L+H+ +  + C           
Sbjct: 713  SEARPGTTKRRQYYYKKTAEALTDCRPIIG----VPSYLYHINL-VLSCPLPEEQNTRGR 767

Query: 1050 ---------VNNGISKDPFLTQVSDFAVLFSS-------ELDAELASLKNFHVRLMSIVL 1093
                     +  GI     + ++  F +   S       +L  +   L    V  ++I L
Sbjct: 768  RIYPPEESAIGFGIITLKEIPKLCPFPIYTRSGEVHVKLKLSKQTIVLNEMQVEKIAIFL 827

Query: 1094 D------VDVEPYTTPWDP---AKAYLFVPVVSDKSVDPMNELDWDLVEKITK 1137
            +      + ++ Y   +DP     +Y+ VPV  D+  D +  +DW+ +E I K
Sbjct: 828  NYTFTNVLRLQQYLMLFDPNASENSYMIVPVKLDEQSDVI--VDWNFLECIYK 878



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       YS++ +YY +KY +++    QPL+     S   
Sbjct: 920  FYVAEICTNLNPKSSFPGDD-------YSTFEEYYLKKYDIQIQNLDQPLLDVDHTSARL 972

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 973  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVAELCAIHPFPASLWRQAVCLP 1030

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             I+ R+ ++LLA Q++ ++
Sbjct: 1031 CILYRINALLLANQIRCQV 1049



 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 126/318 (39%), Gaps = 34/318 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
           R YQ+++   AK K+ I  L     +T I + LI+    +    N+++L+      +F++
Sbjct: 17  REYQVELFYAAKDKDIIVCLGKNYEQTFIVIKLIQEFATN----NRRLLSEGGRRSLFIL 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                   +A  I++ T   V      +  D      +   F+T  VLV TA+    +L 
Sbjct: 73  TDEEKCTIKASYIQQLTDLKV------LLCDTCSLTEFIENFETSHVLVTTAKTCAQLLT 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              I    INL+I+DECH ++  +    ++       + E  P + G+     NL     
Sbjct: 127 DGKILPCQINLVIIDECHKSIDNNKLKFILQTI---LACENVPRIIGLAVPLFNLTQEPG 183

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
           ++   ++I  +E      V T  D   + ++ P P E VVEY K      LH     ME 
Sbjct: 184 RL--GLEIEKVEDTFQCEVETASDILSILRYSPKPKEYVVEYAKNEK-GKLH---TTMEN 237

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
            +  A          +F+        E   + +    +   D      + ++   Y L  
Sbjct: 238 YILHAL---------EFLRDHRHDPTEIYNEEFYEDIQKIPDPTEKPFEMMQDFLYILET 288

Query: 599 LGQWCAYKVAQSFLTALQ 616
           LG WCA + A + L  ++
Sbjct: 289 LGPWCADRAALALLILIE 306


>gi|390601319|gb|EIN10713.1| ribonuclease III [Punctularia strigosozonata HHB-11173 SS5]
          Length = 704

 Score =  193 bits (491), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 191/643 (29%), Positives = 297/643 (46%), Gaps = 90/643 (13%)

Query: 1234 DLEGRIVT--AAHSGKRFYVESIRYEMTAESS---FPRKEGYLGPLEYSSYADYYKQKYG 1288
            D+E  +V   +A   +R+ VE +R +M+  SS     R+ G+   LEY         +  
Sbjct: 52   DVEDAVVQDKSAEFCRRYEVERLRTDMSPLSSPGDSKREAGFASFLEYCKVQ---STRAA 108

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
              +    QPL++   +    N L+P     +E          K    +L P+LC    +P
Sbjct: 109  ESITDYNQPLLQVTRLGGSVNFLNPLLSGPDESH--------KADAKYLIPQLCPKFSIP 160

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAEL 1407
             S+ +    LPS+ RR++ MLL  +L  +I + +   ++L EA+T  S    F YER EL
Sbjct: 161  ASIFKTGLYLPSLARRIDEMLLVKELNAEILHDLVGEQLLLEAITPPSASAEFNYERLEL 220

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            LGDA+LK++ S ++++   Q  EG L   RQ++++N  L   A+  GL  YIQ+  FA  
Sbjct: 221  LGDAFLKYLASVYVYVTR-QGGEGALHNARQKLIANDYLMDCAVRVGLPPYIQSAAFAYK 279

Query: 1468 RWAAPGVLPVFDEDTKD---GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG-ELEGD 1523
             W AP  + V    T D   G S   + EKS+ E K          ED  +    + + D
Sbjct: 280  YW-APHNVRVLARPTDDMTCGPSQDANGEKSIEEPK---------KEDAGIPSKRKAKFD 329

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE-------------SDP 1570
             ++ + L  K +ADVVEA+IG  Y+ GG D A   +  +GI +              SDP
Sbjct: 330  PNTSQWLGHKAIADVVEAIIGAAYLNGGSDNALQTVLDLGIDLSGISSWTDFRRLSASDP 389

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLE 1630
                        P+ VL S     L   L     DR LL  A+       +     QRLE
Sbjct: 390  GH----------PQLVLPSQSVVELSRILGRPVNDRQLLAHALACGGLTGAVPILRQRLE 439

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR-HGSSA 1689
            F+GDA+L++L+ ++L+    +  PG L+   A  V+N+  A + V   ++ HL     S 
Sbjct: 440  FLGDAILEYLLIRYLYSKNQSSSPGILS---AGMVSNDALAALCVTSGIYEHLLVDRRSE 496

Query: 1690 LDRQIRDFVKEVLE-----------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1738
            L R  +++ K +L+           EL  PG   F   D  APKVL D +E+  GA+++ 
Sbjct: 497  LYRTTQNYRKLILQRQQAENAAARAELRSPG--QF-WHDVPAPKVLSDAMEATLGALYVS 553

Query: 1739 SG---RDTSVVWQ-VFQPLLDPMVTPETLPMHPVRELQERCQQQA-EGLEYKAS------ 1787
             G     T +V++ +F+P  D  VT +TL  HP + L E  Q+Q  +  E++ +      
Sbjct: 554  DGFTADGTQIVFERLFKPFYDRHVTLQTLSHHPNKILAELLQKQGCQDFEFRKADEHEAT 613

Query: 1788 -----RSGN-LATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
                 RS N +A   V + GV + V +      A + A+  AL
Sbjct: 614  LLAHGRSDNAIAVCTVIVHGVILAVGEGESIAAATRAASLQAL 656


>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
          Length = 1451

 Score =  193 bits (491), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 204/715 (28%), Positives = 321/715 (44%), Gaps = 96/715 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LEQ+ K+N I  ++TG+GKT +AV+ I+   ++L       +  FL   V L 
Sbjct: 79  RGYQREMLEQSIKRNVIVAMDTGSGKTQVAVMRIQ---HELDTCAPDKIIWFLGKTVSLC 135

Query: 365 YQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            QQ  V++ Q   V +    G++  D W    W R  +  +++V T  IL + L H+ +K
Sbjct: 136 EQQYSVVQRQMPSVSMKLLTGQLNIDAWSEDVWPRILNGTRIIVSTFDILRDALDHAFVK 195

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYH--TTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           M  ++L++ DE H+ VK      VM  FYH    +    P++ G+TASP+  K +  +  
Sbjct: 196 MNMLSLIVFDEVHNCVKNSSGRKVMVNFYHEHKNAGMPVPAILGLTASPIQSKSIHDE-- 253

Query: 482 CAIKICNLESKLDSVVCT-IKDRKELEKHVPMP--SEVVVEYDKAASLWSLHEQLKQMEV 538
               I  LE  +D+V  T   +RKEL +HV  P  S V+ + ++  +   L + L Q E 
Sbjct: 254 ----ILELEVTMDAVCITPTINRKELLQHVNKPNLSRVLYDVEEHPTRTPLMQTL-QSEY 308

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGA-ANLIQKLRAINYALG 597
           +  +  Q  S     Q +   +    E L  +  +  RT S     +L  K + I   L 
Sbjct: 309 SAMDITQDPSIIKAKQLIAKGEKTGPEILSML--MKHRTFSQKQLKSLWNKSKDI---LD 363

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
           ELG W A K                          Y+S++VSL               K 
Sbjct: 364 ELGPWAADK--------------------------YISELVSLF-------------LKR 384

Query: 658 VDSENGFVEGGTNEIEEGELLDSHV--VSGGEHVDVIIGAAVAD-GKVTPKVQSLIKILL 714
           +DS   F E  +NE  +   L  H+  ++   H        + D   +  K   LI+ LL
Sbjct: 385 IDSPMTFNESWSNE--DRTYLAGHLRQIAASPH-----QPKLPDRHNLADKTNKLIQELL 437

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSASL-IGHNNSQEMRT 766
                ED   IIFV    AA VL  +  E P +       S V SA+  I   N  E   
Sbjct: 438 AAD--EDVVGIIFVRSRAAANVLCALLREHPEIRQRYRVGSVVGSAATKIRKQNIYEYLP 495

Query: 767 FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
               +T+  F+ G + LLV+TSV EEG+D+  CN+VI FD   T+ ++IQ RGRARK  S
Sbjct: 496 GATADTLRDFKTGAINLLVSTSVLEEGIDVAVCNLVICFDETTTLKSHIQRRGRARKQKS 555

Query: 827 DYILMIERGNLSHA--TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ 884
             I++    + +    +  R+ ++  E       ER +L  L+  +R    +A     Y 
Sbjct: 556 KMIVLARSSSDAREWDSLERDMKSRYEQ------ERGELDALEIEAR---TEATSSFSYT 606

Query: 885 VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNA 944
           V+++GA + L ++   +  +C+++    Y   RP +I  + E    P  +S  + LP   
Sbjct: 607 VKNSGARLDLENSRQHLEHFCNKVFQRDYVDPRPVYIFHKTELGSAPPTFSATVTLPSGL 666

Query: 945 P--FEKLE-GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGEQQEKV 995
           P    + + G    S + A +     A   LH+ G  +D LLP +  S E +E+V
Sbjct: 667 PKHLRRCQGGGGWRSEKNAMKEAAFRAFVMLHQEGLVSDHLLPLNADSKEAEEEV 721



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 212/508 (41%), Gaps = 81/508 (15%)

Query: 1319 EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            E + G+G+    K Y   LP     +  +P    +    +PSI+  +E  L+A +L   +
Sbjct: 917  EIKPGQGKSSCTKPYRWVLPISRATVDEVPRRAAKCGMLIPSIIHELEVQLIANELSSTL 976

Query: 1379 NYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
              PV  +    ++EA+++ S  E   YER E LGD+ LK+      + ++P   EG L  
Sbjct: 977  LAPVGITDLQLVIEAISSRSAAEPVDYERIEFLGDSVLKYCTVIQAYSEHPFWPEGLLNH 1036

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKS 1495
             + ++VSN  L +  L  GL  +I +  F   +W      P+                  
Sbjct: 1037 FKDRLVSNTRLTRMCLETGLSKFIFSKTFTGIKWR-----PL------------------ 1073

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA 1555
                          Y D+ ++   ++G S   R +  KTLADVVEAL+G  Y +GG   A
Sbjct: 1074 --------------YRDEFLDKKPVDGVS---RFVGPKTLADVVEALVGASYQDGGISKA 1116

Query: 1556 NHLMK-WIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAIT 1614
               +K ++G +     ++V            V        LE+ +   F+ + LL+EA+T
Sbjct: 1117 LECIKVFLGTKCNWHDDKVARDILFRAAISDVPLPPTMEPLEELIGYTFQKKSLLIEAMT 1176

Query: 1615 HASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            H S  + G    Y++LEF+GDAVLD+++   +F S   +P GRL  ++ A  N +  A  
Sbjct: 1177 HGSYAADGQQRSYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFT 1236

Query: 1674 AVKHKLH----------------------VHLRHGSSALDRQIRDF------VKEVLEEL 1705
             ++H L                         +RH S  + R + +       ++E + E 
Sbjct: 1237 NMQHGLRRPEVEINENGEPVPTEVSLPIWKFMRHSSPEMGRIMNETQARFESLQEEINEA 1296

Query: 1706 LKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMV 1758
               G  +    L      K   DI E+  GAI++DSG D  V           P LD ++
Sbjct: 1297 RTNGKHYPWTLLARLHPKKFYSDIFEATLGAIWVDSG-DIEVCTAFLHKFGVLPYLDRIL 1355

Query: 1759 TPETLPMHPVRELQERCQQQAEGLEYKA 1786
            +      HP  EL +    Q    +Y A
Sbjct: 1356 SDNIHVQHPKEELAKLAIDQKMTYDYTA 1383


>gi|295673975|ref|XP_002797533.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226280183|gb|EEH35749.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1450

 Score =  193 bits (490), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 193/726 (26%), Positives = 328/726 (45%), Gaps = 106/726 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR---SICND--LQRQNKKMLAVFLVP 359
           R YQL++LE + K+N I  ++TG+GKT IA+L IR     C +  +++   K    FL P
Sbjct: 31  RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIRHELETCTEDKVRKFGLKEFVWFLAP 90

Query: 360 KVPLVYQQAEVIREQTG-YVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNIL 417
            V L  QQ ++I +Q   Y      G     +W  ++ W       +++V T QILL+ L
Sbjct: 91  TVALADQQHKIISQQLSVYQTRLLLGSDKVHYWSTKKIWDDILLNIRIVVSTPQILLDAL 150

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH-----TTSKEKRPSVFGMTASPVN 472
            H  + M  I+LL+ DE HH     P + +M  FYH     T +K   P + G+TASPV 
Sbjct: 151 SHGFVTMSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVT 210

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWS-LH 530
                S       +  +E  L++   T +  R+EL ++V  P    V++   + + S + 
Sbjct: 211 RADPES-------LKKVEKNLNARCETPRIHREELMRYVHRPELYTVKFRTDSLIHSDML 263

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
           + L ++   V+       +R + Q     D  ++E+L       E+ ++   + L + LR
Sbjct: 264 QNLSRIIGTVDIEKDPWIKRLRRQ----EDRRSQEKLLHAL---EKRKTHCLSQLSKLLR 316

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKF-------QESYLSKVVSLLQC 643
                  +LG W A       +  L+  +R  YQ  V+F       +E+++S+V+S L  
Sbjct: 317 QAISVHDDLGPWAADAFISEVIERLET-KRGMYQ-QVEFHSSLDREEEAFISEVLSELSI 374

Query: 644 ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
             V     K+D    DSE+  V    N + E                             
Sbjct: 375 SPV-----KQDW---DSESNVVSTKVNLLVE----------------------------- 397

Query: 704 PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQ 762
                    LL+ +HT DF  IIF ++     +L  + ++ P L   + S + +G +   
Sbjct: 398 ---------LLESEHTADFTGIIFAQQRATVTMLSHLISKHPRLKDIIVSGAFLG-DACY 447

Query: 763 EMRTFQMQE---------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
             RT  + E         +I   R G+  LL+ATSV EEG+D+  C++V+ FD  K + +
Sbjct: 448 ASRTSTITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRS 507

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           +IQ RGRARK  S +++ ++  N+S     +     E+ ++  +I   D+  L+D     
Sbjct: 508 FIQRRGRARKEHSKFVMFLDSDNISEE---KQWTRLEDVMK--SIYEDDMRRLEDNMARE 562

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
           ++        ++ESTGA+++L +A   +  +C+ L    ++  RP FI    ++ G    
Sbjct: 563 NIVEEGDQYLRIESTGALLTLENARQHLEHFCATLHY-AFTDSRPHFIFHESKEDGM--- 618

Query: 934 YSCKLQLP--CNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE 990
            + K+ LP   +  F  + G     + R+AQ+     A  KL+  G   D LLP    G+
Sbjct: 619 VAAKVILPNVLDPKFRVIHGSKRWKTERMAQRDAAFQAYLKLYNEGLVNDYLLPVHWKGD 678

Query: 991 QQEKVD 996
           +  K++
Sbjct: 679 EDPKLE 684



 Score =  141 bits (355), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 188/443 (42%), Gaps = 83/443 (18%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTA 1393
             P   C I  LP      A   PSI+ +VE+ L+A +L   I  PV  +    ++ AL A
Sbjct: 918  FPARDCSIDKLPLEYTMFALLSPSIIHKVETYLIAEELNKTILSPVGFTDLNLVITALCA 977

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
               +E   Y+R E LGD+ LK+  S  L    P  HEG L+  + ++VSN  L   A+  
Sbjct: 978  PDAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIET 1037

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I  D F   +W      P++                           N    ++ 
Sbjct: 1038 GLDKFIFVDIFTGVKWR-----PLY---------------------------NKAHVKEQ 1065

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
            D+   E+          S+KTLADV+EAL+G   ++GG+      +K    ++   P   
Sbjct: 1066 DIPRREM----------STKTLADVIEALLGAATIDGGQIKVEKCLKIFLPEIRWIPFAD 1115

Query: 1574 GCPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
               +    VPE    L +  F  +E  +   F  +  L +A TH S P S +S YQRLEF
Sbjct: 1116 RLNALYNSVPEVYENLPTSWFRDIESLVGYTFNKKVFLAQAFTHPSNPGSTMS-YQRLEF 1174

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------------- 1666
            +GD++LDH+I  HLF S  N P   +  +RA+  N                         
Sbjct: 1175 LGDSILDHIIVDHLFNSPRNFPHVDMHLMRASLANADFLAFLCIGMTTDEERGEIVEASR 1234

Query: 1667 NENFARVAV-KHKLHVHLRHGSS--------ALDRQIRDFVKEVLEELLKPGFNSFG-LG 1716
            N  F R+   K  L  ++RHG+S            Q +    ++ + L +     +  L 
Sbjct: 1235 NGTFTRMTTRKISLWQYMRHGTSWELTVSQQQTVNQYQALKADITKALYEADTYPWALLS 1294

Query: 1717 DCKAPKVLGDIVESIAGAIFLDS 1739
              +A K   D++ES+ GAIF+DS
Sbjct: 1295 RLRAQKFFSDLIESVLGAIFIDS 1317


>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
          Length = 1871

 Score =  193 bits (490), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 76/488 (15%)

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLA--IQLKDKINYPVPAS--------KILEALTAASCQ 1397
            P SL+R +   P +   + + LL   ++ KD I+    AS        ++L ALT     
Sbjct: 1338 PVSLLRNS---PKVKTPLSTALLPPPLRYKDTISVLSTASSPRGPEPREVLSALTLIKSN 1394

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
            +TF  ER+E LGD++LK+  S +LF K+PQ  EGQLT ++ +++ N  LY      GL  
Sbjct: 1395 DTFNLERSETLGDSFLKFAASLYLFHKFPQMDEGQLTNLKSRLIGNRNLYYAGERAGLAG 1454

Query: 1458 YIQADRFAP-SRWAAPGVL---------------PVF-------DEDTKDGDSSLFDQEK 1494
             ++ ++F+P S +  PG L               P F        ED   G+ S   + +
Sbjct: 1455 RMKVEQFSPRSDFLVPGFLAPSELVSFITRRKIRPTFLIGVQFPVEDALSGNLS--PESR 1512

Query: 1495 SVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS-------YRVLSSKTLADVVEALIGVYY 1547
            S+ ++KL         +D D+ + E  G + +        + +S K++AD VEALIG Y 
Sbjct: 1513 SLLQEKL---------KDSDLAEEEPFGKAQNAMQRYVGAQAVSDKSVADCVEALIGTYL 1563

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVP---ESVLRSVDF------HALEDA 1598
            + GG   A  +++W  I    D        +   V    ++ ++ VD+        +E  
Sbjct: 1564 LSGGITDAVSILEWFKIIPSEDKFLSFLTKKVNTVISEGKATVQEVDWLLNSCRSDIETI 1623

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            L  KFKD  LL+EA++HAS   +  +  Y+RLEF+GDA+LD LIT +++ +  +L PG L
Sbjct: 1624 LGYKFKDPSLLLEALSHASYIRNRYTRSYERLEFLGDAILDFLITAYIYENCGDLSPGDL 1683

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHL-RHGSSALDRQIRDFV--KEVLEE-LLKPGFNSF 1713
            TDLR+A VNN  FA   V+  LH +     +  L+  I+ FV  +E L+  LL+      
Sbjct: 1684 TDLRSALVNNVTFASYVVRLGLHKYFCSQFNGVLENAIKTFVEHQEQLDHVLLEDVLYLI 1743

Query: 1714 GLGDCK------APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--PM 1765
               DC        PK L DI ES+ GA+FLDSG D  +VW+V   ++   +   ++  P 
Sbjct: 1744 EEEDCNIAQYIDVPKALSDIFESLTGAMFLDSGGDLKLVWKVIYRIMHKEIHDFSMKVPK 1803

Query: 1766 HPVRELQE 1773
             PVR L E
Sbjct: 1804 QPVRVLME 1811



 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 128/226 (56%), Gaps = 10/226 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ----NKKMLAVFLVPK 360
           R YQ  + E A KKNTI FL TG+GKT IA+ LI+ + + LQ+      K+    FLV  
Sbjct: 205 RLYQTQLEEIAVKKNTIIFLPTGSGKTHIAISLIKRLRDTLQKPWGFGGKR--CFFLVNT 262

Query: 361 VPLVYQQAEVI-REQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           VPLV QQ + I R    + V  + GE   D+W+  +W  E    QV+VMT QIL ++L H
Sbjct: 263 VPLVAQQKKTIERSCPVHGVAGFSGEDNVDYWNKAQWDSELSKYQVIVMTCQILSDMLTH 322

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
             ++++ I+LLI DECHH V+ HP  L+M  F +   K ++P V G+TA+ +N     ++
Sbjct: 323 QYLQLKDISLLIFDECHHGVEDHPMRLIMKHFLN-CPKNEQPRVLGLTATLLNSNVKLNK 381

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAAS 525
           +   I+  +LE+   + + T  D  E+  +   P E ++ Y + ++
Sbjct: 382 IQETIR--HLETTFQASIATADDMGEVAMYSTNPREQLLYYRRPSA 425



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 125/249 (50%), Gaps = 20/249 (8%)

Query: 749 FVKSASLIGHNNSQEMRTFQM-------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
           F+K   ++G N S    T +        ++ + KF++G +  L+ATSV EEGLD+ QC +
Sbjct: 619 FLKHDFIVGFNISPLCSTREQHYNKKISEQALLKFKNGDLNCLIATSVVEEGLDVPQCTL 678

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI--- 858
           V+R+D+     +YIQS+GRAR   ++++++++  N         A    E+     +   
Sbjct: 679 VLRYDVPLEYRSYIQSKGRARNKKANFVILVDEENRQKFNSQYRAFQQVESYLNGMLCGG 738

Query: 859 -ERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
             R   S  +    L   D +P   Y+  +  ++ ++ SA+ L++ YCS LP D+Y+ + 
Sbjct: 739 EVRNTPSEAEVKENLNDDDCIPA--YKTRNGNSLFAV-SAISLLNRYCSVLPHDQYTTIL 795

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
           P  I E    P    +    + +P   P  E ++G   SS++ A+++  L  C KLH+ G
Sbjct: 796 PMVIQE----PAQGNKTMVTIIMPIACPIKEPVQGRPMSSVKNAKRSAALNVCIKLHKAG 851

Query: 977 AFT-DMLLP 984
               + LLP
Sbjct: 852 ELDYETLLP 860



 Score = 49.3 bits (116), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 45/175 (25%)

Query: 1225 MADSCANAGDLEGRIVTAAHSGK----RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYA 1280
            M D+C         +VT  + G     R+ V  +   +T  S F           + ++A
Sbjct: 1069 MYDNC---------VVTPWYRGSLHPDRYIVSRVLEYLTPYSKFEDNS-------FETFA 1112

Query: 1281 DYYKQKYGVELIFKK-QPLIRGRGVSYCKNLLSPR----------------FEHSEEQEG 1323
            DYY  KY +E++ +K QPL+  R +S   N L PR                  H + +  
Sbjct: 1113 DYYSNKYNLEILGRKDQPLLEVRNISSRMNCLLPRAATIRGLSDKQRRLASLAHGDYKPR 1172

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            E  E+          PE C     P  L   A  LPSI+ RV  +L+A +L+ +I
Sbjct: 1173 EFTELF--------VPEYCVRADYPAHLWYKAIILPSIVHRVTMLLIAEELRVQI 1219


>gi|307109321|gb|EFN57559.1| hypothetical protein CHLNCDRAFT_143199 [Chlorella variabilis]
          Length = 2232

 Score =  192 bits (489), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 249/580 (42%), Gaps = 170/580 (29%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            SYA YY +++G   + + QPL+    VS  +  L+   +    ++      L+    V L
Sbjct: 1647 SYAAYYAERWGQRELDEGQPLLAAARVS--RQQLARGLDMRRARKRGCALQLEAEEEVRL 1704

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQ 1397
             P+LC +HP+P +L R    LP++M ++E  LLA QL +++   +PA    E    A   
Sbjct: 1705 LPQLCIVHPVPAALWRPLGTLPALMWQLEGALLADQLLEQM---LPADLPPEK---APPL 1758

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
            E     R E LGDA+LK+ VS  LF  + Q HEGQLT+ ++ +V+N+ L + A+  GL  
Sbjct: 1759 ELLRTTRLETLGDAFLKFAVSAQLFSAHRQYHEGQLTKRKELVVANIHLAEAAVKLGLDR 1818

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
             ++   F+   WA+P                                             
Sbjct: 1819 RLRVLPFSMHNWASP--------------------------------------------- 1833

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK----------------- 1560
               E    S +VL     AD +EAL+G + V GG  AA   ++                 
Sbjct: 1834 ---EAVRKSSKVL-----ADAMEALLGAFLVAGGYPAALAFLQASAGRRGRRLRLPRAAA 1885

Query: 1561 --WIGIQVESDPEEVG-----CP-SRPACV-PESVLRSVDFHALEDALKIKFKDRGLLVE 1611
              W G+  +   + +G      P S  AC+ PES     D  A+E  L   F  + L+VE
Sbjct: 1886 PGW-GLCSQPYSQHLGLLKGWVPISAEACIPPESPELECDVGAIEAVLGHTFASKWLVVE 1944

Query: 1612 AITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
            A+TH S P SGV C+QRLEF+GDAVLD L                + D+R+ AVN    A
Sbjct: 1945 ALTHCSWPGSGVRCFQRLEFLGDAVLDAL----------------MHDMRSVAVNASRLA 1988

Query: 1672 RVAVKHKLHVHLRHGSSALD--RQIRDFVKEVLE-------------------------- 1703
                          G   LD   + RD ++E LE                          
Sbjct: 1989 YA------------GKPGLDFVEEWRDRLREALEAQEQQACPASPAGGTAGAAAGDADAA 2036

Query: 1704 ---ELLKPGFNS------FGLGDCKAPK-----------------VLGDIVESIAGAIFL 1737
               E L+    S      FG    +APK                 VL D+VES+ GA+F+
Sbjct: 2037 ASKEALRAAELSVMTQFAFGFQTIQAPKASGRDQPPSPALHCLQTVLSDVVESLIGAVFV 2096

Query: 1738 DSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQ 1777
            D+G D   VW+V Q LLDPMV PETLP+HP+R LQE  Q+
Sbjct: 2097 DTGGDMGRVWEVTQRLLDPMVVPETLPVHPIRRLQELVQR 2136



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 80/330 (24%)

Query: 702  VTPKVQSLIKILLKYQHTED-------FRAIIFVERVVAALVLPKVFAELPSLSFV-KSA 753
            V+PK+ +L   L++Y+           +  I+FV + +AA  L K+ + LP+   V +++
Sbjct: 787  VSPKMAALAGQLMRYRGAAAALAPGPGWCGIVFVTQRMAAWALHKMLSTLPATRGVFRTS 846

Query: 754  SLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
            +++G    ++ R  +      +FR G + LLV+TSVAEEG+D++ C +V+R+DL     +
Sbjct: 847  AIMGLGPREQSRILR------RFRAGELNLLVSTSVAEEGIDVKSCQLVVRYDLPNNAQS 900

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEA---IERTDLSHLKDTS 870
            YIQSRGRAR   S+ ++M++ G       +R+    E  LR+E    IER     + D +
Sbjct: 901  YIQSRGRARMINSELLMMVQEGVEEEHRMVRHMVEYEHQLRQEVLLNIERLQAGAIDDDA 960

Query: 871  RLISVDAVPGT------VYQVESTGAVVSLNSA--------------------------- 897
             + +  A          VY+VESTGA  +L +A                           
Sbjct: 961  DVAAEAAELQAALAHAPVYEVESTGARATLENAQARPHTCAQAASRPAQRRCSCCRTAVQ 1020

Query: 898  ---VGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVC 954
               + L+H Y S+LPSD+Y++LRP F  E+ ++      +  ++ LP N+P    +G   
Sbjct: 1021 EGPLALLHTYTSKLPSDQYTVLRPLFRTEQLDQ----RVFRTRVFLPNNSPLPWADG--- 1073

Query: 955  SSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                                +GA  D LLP
Sbjct: 1074 --------------------LGALNDFLLP 1083



 Score = 99.0 bits (245), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 136/348 (39%), Gaps = 99/348 (28%)

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGY-VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQ 411
           +A+FL PKV LV QQAEV+R   G   V H+ GEMG D ++ +RW   F    VL MT Q
Sbjct: 168 VAIFLAPKVALVVQQAEVLRAHLGADQVAHFVGEMGVDLFEKERWHAAFADHDVLAMTPQ 227

Query: 412 ILLNILRHSIIK---------------------MEAINLLILDECH----------HAVK 440
           ILLN+L H IIK                       A+   +  E H           A +
Sbjct: 228 ILLNLLSHGIIKASLRPRQHPSGQLLRLAKQSAQRALAAALTQESHAPPVSSEVQLAAPR 287

Query: 441 KHP-----------------YSLVMSEFYHTTSKE------------------KRPSVFG 465
             P                 + LV  E +H  SK                    RP VFG
Sbjct: 288 LGPSPRLPLPPATRPQMSQVHLLVFDECHHCKSKHPFNRIMQQFYHSHEALLAPRPHVFG 347

Query: 466 MTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAAS 525
           MTA+P N+    +Q D   KI  LE+ LD+ V T+ +R  +E+    P+  V  Y    S
Sbjct: 348 MTAAPANVGRRETQEDMEAKIRVLEANLDARVVTVVNRASVEEVARPPTLRVAAYRP--S 405

Query: 526 LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDG---- 581
            W      +   VAV +     +RR        + AG   EL+ +  +  +   +G    
Sbjct: 406 WW------EGTPVAVTQRLLLRARRRL------QCAGENFELQWLRSLQRQLGCEGLEPS 453

Query: 582 --------------AANLIQKLRAINYALGELGQWCAYKVAQSFLTAL 615
                         AA L Q L ++ + L  LG +CA   A     +L
Sbjct: 454 AHCIFFDPLVPGFTAARLDQMLSSVEHVLQTLGPYCAALCAAEVFASL 501



 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/37 (72%), Positives = 33/37 (89%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR 339
           QAR YQL++LE AKK+N IAFL+TGAGKT ++VLLIR
Sbjct: 43  QARIYQLELLELAKKRNVIAFLDTGAGKTFVSVLLIR 79


>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
 gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum
           commune H4-8]
          Length = 1343

 Score =  192 bits (489), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 205/748 (27%), Positives = 330/748 (44%), Gaps = 129/748 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LEQ+  +N I  L+TG+GKT IAVL ++   ++++R+  K ++ F  P V L 
Sbjct: 1   RSYQQEMLEQSLHRNIIIALDTGSGKTHIAVLRLK---HEMERRTNK-ISWFFAPTVGLC 56

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            QQ  VI+      VG   G +  D W DA  W R     ++++ T Q+LL+ LRH  I 
Sbjct: 57  EQQRSVIQRSLPVPVGLISGALEPDQWKDAALWMRVLRDHKIMISTPQVLLDALRHGYIN 116

Query: 424 M-EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----------------RPSVFGM 466
           +   I+LL+ DE HHAV  HPY+ VM EFY   +                   RP+V G+
Sbjct: 117 LGRDISLLVFDEAHHAVDNHPYNRVMLEFYRPLATVPVNVESQIAPGKVVPLCRPAVLGL 176

Query: 467 TASPVNLKGVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVV------E 519
           TASP+         + A +   +ES LD+ +C  +  RKEL  HV  P+   V      E
Sbjct: 177 TASPI----FGGNTEKAFR--TIESNLDATICAPVVHRKELLSHVHRPTFKHVMYTPPGE 230

Query: 520 YDK--AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
           +D+  + +L SL   +K +++  + A    S R K   +       +   +++     + 
Sbjct: 231 WDRPFSTNLASLQAVVKSVDINRDPAV--ISLRQKLPTLARGTPEYERTDQRLSKAIHKK 288

Query: 578 ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKV 637
           ++     L Q  RA      ++G W A                          + Y+  V
Sbjct: 289 KTFTHTGLTQFQRAAEEICEDIGGWAA--------------------------DWYVWTV 322

Query: 638 VSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAA- 696
           V            ++K A++ +S       G    E+  LLD   +    HV+ +  A  
Sbjct: 323 VQ----------EARKAARIGNSIISLSSWGNK--EKKYLLD---ILDRVHVNPVSLAPD 367

Query: 697 -VADGKVTPKVQSLIKILLK-----YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
            + D   T KV +L+  LL          E F A++FVER  +   L ++    P     
Sbjct: 368 DILDDS-TEKVHALVNTLLSEKAEAEAANEAFSALVFVERRDSVFALAELLKNHPVAGRE 426

Query: 751 KSA-SLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQC 799
            S  +L+G + S    +F          ++ ET+  FR G   ++V+TSVAEEG+DI+ C
Sbjct: 427 FSVGNLVGTSESTHRHSFLDITRVLLDQKLDETLEDFRLGTKNVIVSTSVAEEGIDIQAC 486

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI--ERGNLSHATFLRNARNSEETLRKEA 857
             V+R+D    + +++QSRGRAR+  S ++ +   E G+       R   N  E L KE 
Sbjct: 487 GCVVRWDPPPNMASWVQSRGRARRKRSVFVSLFSTEGGH-------RKDVNEWERLEKEM 539

Query: 858 IER----TDLSHLKDT--SRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSD 911
           ++R    T + + +D         +     +Y   +TGA ++L SA+  +  +C+ +P  
Sbjct: 540 VDRYTDPTRVQYNQDAGWGEDGEDEDEEELIYTNPTTGAKITLQSALPHLEHFCAMIPFS 599

Query: 912 RYSILRPEFIMERHEKPGG-----------PT-EYSCKLQLPCNAPFE--KLEGPVCSSM 957
            ++  RP + ++  E P G           PT  +   + LP   P E      P   S 
Sbjct: 600 AHTDNRPIYDVDPPEMPPGWHENTRVEVPLPTGPFGATVTLPRVVPLEVRSFTVPREFST 659

Query: 958 RL-AQQAVCLAACKKLHEMGAFTDMLLP 984
           ++ A + V   A   LH+ G   D  LP
Sbjct: 660 KISAFRHVAFVAYTTLHKCGLLNDHFLP 687



 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 50/262 (19%)

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSV---- 1590
            LADV+E+LIG  YV GG        ++  + ++ D       +  A +   + R+V    
Sbjct: 1070 LADVIESLIGAAYVHGGLSLGRACAQFFDLGLKWD-------TTSARISTILSRTVTLDQ 1122

Query: 1591 ---DFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
               +   +E  L   F+ + LL+EA+THAS +       Y RLEF+GDAVLD  +T ++F
Sbjct: 1123 YPAELQYVERMLGYTFERKALLIEALTHASYQEPLPTPSYGRLEFLGDAVLDMAVTPYIF 1182

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV------------------------- 1681
             S  N  PG +   R+AAVN    A V ++ K+ V                         
Sbjct: 1183 ASKKNYSPGHIHLRRSAAVNMHFLAFVCLRAKVAVDKHMPRPTAPDWRVQMATESQDIYL 1242

Query: 1682 ---HLRHGSSALDRQIRDFVK-----EVLEELLKPG--FNSFGLGDCKAPKVLGDIVESI 1731
                L   S+ +D Q   F +     + + E L+ G  F    L   +APK   D+VES+
Sbjct: 1243 WQCMLHSSSTVIDDQNNTFARFRRLEKEISEALETGDIFPWAALTRMQAPKFFSDVVESL 1302

Query: 1732 AGAIFLDSGRDTSVVWQVFQPL 1753
             GA+FLD+  D  +   V + L
Sbjct: 1303 IGAVFLDAEGDMEIATDVIRTL 1324



 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 12/133 (9%)

Query: 1339 PELCFIHPLPGSLVRGAQR-------LPSIMRRVESMLLAIQLKDKI--NYP---VPASK 1386
            P   ++ P   S++   Q+       LPS +R +E       LK+ +  + P   VP S 
Sbjct: 899  PRFVYLLPQFASVILQGQQDAEYAALLPSTLRALEVTTTVDSLKEHLFASTPMESVPQSL 958

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +  A+TA   QE   Y+R E +GD  LK++VS  L+ +YP  HEG L + +   VSN+ L
Sbjct: 959  MSVAMTAPVSQEPVNYQRLETMGDTVLKYLVSIQLYAEYPLWHEGYLAKQKDHTVSNVRL 1018

Query: 1447 YQYALSKGLQSYI 1459
             + ++ + +  +I
Sbjct: 1019 AKISVRRHIFQWI 1031



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 15/188 (7%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            ++EALT AS QE   T  Y R E LGDA L   V+ ++F        G +  +R+    N
Sbjct: 1144 LIEALTHASYQEPLPTPSYGRLEFLGDAVLDMAVTPYIFASKKNYSPGHI-HLRRSAAVN 1202

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGD--SSLFDQEKSVAEDKL 1501
            +    +     L++ +  D+  P R  AP        +++D      +     +V +D+ 
Sbjct: 1203 MHFLAFVC---LRAKVAVDKHMP-RPTAPDWRVQMATESQDIYLWQCMLHSSSTVIDDQN 1258

Query: 1502 GTDKNYNEYE---DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV--EGGKDAAN 1556
             T   +   E    + +E G++   ++  R+ + K  +DVVE+LIG  ++  EG  + A 
Sbjct: 1259 NTFARFRRLEKEISEALETGDIFPWAALTRMQAPKFFSDVVESLIGAVFLDAEGDMEIAT 1318

Query: 1557 HLMKWIGI 1564
             +++ +GI
Sbjct: 1319 DVIRTLGI 1326


>gi|357464753|ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
 gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
          Length = 344

 Score =  192 bits (488), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 189/337 (56%), Gaps = 13/337 (3%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  +   F+++ LL EA+TH+S P S    Y+RLEF+GDAVL H I+ HLF  YTN+ 
Sbjct: 11   AVEKIIGYTFRNKNLLEEALTHSSYPES--VSYERLEFIGDAVLGHAISNHLFLVYTNVD 68

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
              +L+ LR+A V+ E  AR AV + LH ++R  + +L   IR+F   V +E  +     +
Sbjct: 69   QRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGR-AIVLY 127

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPKVL D+VES+A A+++D   D   +W V + LL+P+VT   L     PV  L
Sbjct: 128  G-GAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTML 186

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E C +  + ++ + SR+G+ +T  VY+DG    VA + QK +A+  AA++A+  L   E
Sbjct: 187  YEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKL---E 243

Query: 1832 TAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYA 1889
                      +  K  +GT      +Q L  +C R+ WP P+Y   R+ G    K F  +
Sbjct: 244  RVLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVTS 303

Query: 1890 VRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELL 1926
            V+V T D   T + +GE    VK +++SAA L++  L
Sbjct: 304  VQVATPD--GTLKMLGEEKSRVKDSQNSAASLMIRAL 338



 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EALT +S  E+  YER E +GDA L   +S  LFL Y    + QL+ +R   VS   L +
Sbjct: 28   EALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEKLAR 87

Query: 1449 YALSKGLQSYIQ 1460
             A+S  L  YI+
Sbjct: 88   AAVSNCLHRYIR 99


>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
          Length = 1450

 Score =  192 bits (488), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 210/435 (48%), Gaps = 53/435 (12%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P   IL++LT     + F  ER E LGD++LK+ +S FL+  YP   EG LT ++ ++
Sbjct: 1018 PSPVD-ILQSLTTKVKNDVFNLERVETLGDSFLKFAISLFLYQAYPTCGEGPLTHLKGKL 1076

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS------RWAAPGVLPVFDEDTKDGDSSLFDQEK 1494
            V NL L+  +  K +   +  + FAP+       +AA  VL       K   + L++   
Sbjct: 1077 VGNLNLFYCSKQKNIAGRMHVEDFAPTGNFVTPAYAAHQVLQQILRAEKVSANILYEIRV 1136

Query: 1495 SVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------------YRVLSSKTLADVVEAL 1542
              AE   G   N      D M+D  L   S               +V+S K+++D  EAL
Sbjct: 1137 PAAERFSGCISNNT---TDMMQDKVLAWPSDEKVTHTGMEHFLGIQVVSDKSVSDCTEAL 1193

Query: 1543 IGVYYVEGGKDAANHLMKWIGI-----------QVESDPEEVGCPSRPACVPESVLRSVD 1591
            IG Y +  G   A  ++KW  I             E +  ++G       +P +      
Sbjct: 1194 IGTYLLHLGIKGALQILKWFEILPKSLNVDQYLYSEVENPQLGDGDVNVHIPWA------ 1247

Query: 1592 FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
               +E+ L  KF++R  L++A TH S  P+   + YQRLEF+GDAVLD L+T H++ +  
Sbjct: 1248 -QTMEERLGYKFRNRAFLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYETCG 1306

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK----------E 1700
            NL PG LTDLR+A VNN  FA +AV++ LH  L   +  L   I  FVK          +
Sbjct: 1307 NLSPGELTDLRSALVNNITFACLAVRYGLHTALLALAPKLFDLIDKFVKFQENRNYKIDD 1366

Query: 1701 VLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT- 1759
             L  +L              PKVLGDI ES+ GAIFLDSG++  VVWQV   L+   +  
Sbjct: 1367 ELLWVLLEEEECNMAEHVDVPKVLGDIYESVIGAIFLDSGKNLEVVWQVIYNLMKNEIDL 1426

Query: 1760 -PETLPMHPVRELQE 1773
              + +P  P+R + E
Sbjct: 1427 FSKNVPKQPIRVIHE 1441



 Score =  171 bits (432), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 138/239 (57%), Gaps = 7/239 (2%)

Query: 297 EKMPEEQ--ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--M 352
           ++ PE++  ARPYQ+ + E+  ++N+I +L TG+GKT IAVLL++ +  D+QRQ  +   
Sbjct: 2   DQTPEKEFKARPYQIYLYEKTIEQNSILYLPTGSGKTYIAVLLVKRLSGDVQRQYTEGGK 61

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
             +F+V  V LV QQ   +   TG V   Y G+MG DFW  + W++E +T QVLVMTAQI
Sbjct: 62  RTIFIVNTVALVVQQTAFLTRHTGLVCKGYSGDMGVDFWSKEEWRKEINTNQVLVMTAQI 121

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN 472
            LN+L H  I ++ INLLI DECH AVK HP   +M  F     KEK P V  M+AS +N
Sbjct: 122 FLNLLTHGYISLDKINLLIFDECHRAVKDHPMRQIMQRF-QDYPKEKLPRVLAMSASLLN 180

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHE 531
                 +++  ++   LE    + + T++    +  +   P E V  Y+    +  L+E
Sbjct: 181 ANVPLGKIETTLR--ELEVTFQAKIITVESLAYVTDYATNPKEFVEYYETPHKISLLNE 237



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 26/241 (10%)

Query: 705 KVQSLIKILLKY----QHTEDFRAIIFVERVVAALVLPKVFAELPS----LSFVKSASLI 756
           KV  L+++L  +    ++  +F  IIFV+R   A VL ++ ++L S      F+K   ++
Sbjct: 356 KVLKLMEVLKTFYNNMENKRNFCCIIFVKRRFTAKVLYQLLSKLSSCDEDFQFLKPQYMV 415

Query: 757 GHNNSQEMRTFQM-------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           G++N+      +         E + KFR+G    +VAT V +EG+DI  C +++R+    
Sbjct: 416 GYSNNPYKNARETVCIAKWNDEVLTKFRNGVANCVVATDVVDEGVDIPSCTLIVRYYAPM 475

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT 869
              AYIQS+GRAR   S +I++    +  + +  R+ + +E  LR+    ++D   +K +
Sbjct: 476 DFRAYIQSKGRARHSTSHFIILASSED-DYISRYRSFQQTERFLRQALHGKSDY-RIKPS 533

Query: 870 SRLISVDAV-------PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
           +    VDA+       P  V     T +V++  SA+ LI+ YC+ L   ++ +L P ++ 
Sbjct: 534 NN--DVDALLYQYVIQPYIVKDANGTISVITEQSAISLINEYCANLVKSKFIMLTPTWVK 591

Query: 923 E 923
           E
Sbjct: 592 E 592



 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 27/219 (12%)

Query: 1172 KLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGL------VPDREAMQIHNADMPTGKLMM 1225
            KL H + F +       I   I +F +  AS +      VP  E  QI+   +   K++ 
Sbjct: 693  KLFHTLVFSK-------ILKVIKEFMIFDASNMENNFLVVPINERGQINWDIVNRYKIIA 745

Query: 1226 ADS-----CANAGDLEGRIVTAAHSGKRFYVESIRYE-MTAESSFPRKEGYLGPLEYSSY 1279
            + S          + +  +VT  +     Y+ +   E + AESSFP  +       Y+SY
Sbjct: 746  SISPSENLVVKESEYDLALVTPNYRASNMYIVTQVCEYLKAESSFPTSD-------YNSY 798

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPP 1339
              Y+K+++ +E+    QP++  + +S   N   PR   +   + +    L + +   L P
Sbjct: 799  VHYFKERHYIEIKNPAQPMLEVKPISSKINCTKPRSIKANLSKRKRAS-LTEDFEEHLVP 857

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            ELC     P      A  LPSI+ R+  ++ A +L+ KI
Sbjct: 858  ELCDRIDFPSLYWLKATTLPSILHRISQLIAAEELRVKI 896


>gi|225684610|gb|EEH22894.1| dicer [Paracoccidioides brasiliensis Pb03]
          Length = 1415

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 195/735 (26%), Positives = 334/735 (45%), Gaps = 104/735 (14%)

Query: 305  RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
            R YQL++LE + K+N I  ++TG+GKT IA+L IR   ++L+   +  L  FL P V L 
Sbjct: 31   RAYQLEMLEASLKENIIIAMDTGSGKTQIAILRIR---HELETCTEDKLVWFLTPTVALA 87

Query: 365  YQQAEVIREQTG-YVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
             QQ + I +Q   Y      G     +W  ++ W       +++V T QILL+ L H  I
Sbjct: 88   DQQHKNISQQLSVYQTRLLLGTDKVHYWSTKKIWDDVLLNIKIVVSTPQILLDALSHGFI 147

Query: 423  KMEAINLLILDECHHAVKKHPYSLVMSEFYH-----TTSKEKRPSVFGMTASPVNLKGVS 477
             M  I+LL+ DE HH     P + +M  FYH     T +K   P + G+TASPV      
Sbjct: 148  TMSRISLLVFDEAHHCDGFSPANTIMQRFYHEQLQRTGTKTDLPHILGLTASPVTRADPE 207

Query: 478  SQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWS-LHEQLKQ 535
            S       +  +E  L++   T +  R+EL ++V  P    V++   + + S + + L +
Sbjct: 208  S-------LKRVEKNLNARCETPRIHREELMRYVHRPELYTVKFRTDSLIHSDMLQNLSR 260

Query: 536  MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
            +   V+       +R + Q     D  ++E+L  +Y + +R ++   + L + LR     
Sbjct: 261  IVGTVDIEKDPWIKRLRRQ----EDRRSQEKL--LYALEKR-KTHCLSQLSKLLRQAINV 313

Query: 596  LGELGQWCAYKVAQSFLTALQNDERANYQ-------LDVKFQESYLSKVVSLLQCELVEG 648
              +LG W A       +  L+  +R  YQ       LD + +E+++ +++S L    V  
Sbjct: 314  HDDLGPWAADAFISEVIERLET-KRTMYQHVELHSSLD-REEEAFIFELLSELSISPV-- 369

Query: 649  AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
               K+D    DS++  V    N + E                                  
Sbjct: 370  ---KQDW---DSKSNIVSTKVNLLVE---------------------------------- 389

Query: 709  LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQEMRTF 767
                LL+ +HT DF  IIF ++     +L  + ++ P L   + + + +G +     RT 
Sbjct: 390  ----LLESEHTADFTGIIFAQQRATVTMLSHLISKHPRLKDIIVTGAFLG-DACYASRTS 444

Query: 768  QMQE---------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
             + E         +I   R G+  LL+ATSV EEG+D+  C++V+ FD  K + ++IQ R
Sbjct: 445  TITEVHDTRSQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDAIKNLRSFIQRR 504

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            GRARK  S +++ ++   +S     +     EE +R  +I   D+  L+D     ++   
Sbjct: 505  GRARKERSKFVMFLDSDKISEE---KQWTRLEEVMR--SIYEDDMRRLEDVMARENIVEE 559

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
                 ++ESTGA+++L +A   +  +C+ L    ++  RP FI +  E  G     + K+
Sbjct: 560  GDQYLRIESTGALLTLENARQHLEHFCATLHY-AFTDSRPHFIFDESEGDGT---IAAKV 615

Query: 939  QLP--CNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
             LP   +  F  + G     + R+AQ+     A  KL+  G   D LLP    G++  K+
Sbjct: 616  VLPNVLDPKFRVIYGSKRWKTERMAQRDASFQAYLKLYNEGLVNDYLLPVHWRGDEDPKL 675

Query: 996  DQNDEGEPLPGTARH 1010
            +  ++   +   +RH
Sbjct: 676  EYCEQRPSVVKISRH 690



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 186/442 (42%), Gaps = 83/442 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTAA 1394
            P   C I  LP      +   PSI+ +VE+ L+A +L   I  PV  +    ++ AL A 
Sbjct: 911  PARECSIDKLPLEYTMFSLLCPSIIHKVETFLIAEELNKTILSPVGFTDLNLVITALCAP 970

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  S  L    P  HEG L+  + ++VSN  L   A+  G
Sbjct: 971  DAREATNYQRIEFLGDSILKFHTSLQLLAANPIWHEGLLSNAKDEVVSNKRLSYAAIETG 1030

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F   +W                                     YN+     
Sbjct: 1031 LDKFIFMDIFTGVKWRP----------------------------------RYNK----- 1051

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
                 +E      R +S+KTLADV+EAL+G   ++GG+      +K    ++   P    
Sbjct: 1052 ---AHVEEQDIPRREMSTKTLADVIEALLGAATIDGGRTKVEKCLKIFLPEIRWMPFADR 1108

Query: 1575 CPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +    VPE    L S  F  +E  +   F  +  L +A TH S P S +S YQRLEF+
Sbjct: 1109 FDALYNSVPEVYENLPSSWFRDIESLVGYIFNKKVFLAQAFTHPSNPGSTMS-YQRLEFL 1167

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN-------------------------N 1667
            GD++LDH+I  H+F S  N     +  +RA+  N                         N
Sbjct: 1168 GDSILDHIIVDHIFNSPRNFQHVDMHLMRASLANADFLAFLCIGMTTEEERGEIVEASRN 1227

Query: 1668 ENFARVAV-KHKLHVHLRHGSS----ALDRQIRDFVKEVLEELLKPGFNSFG-----LGD 1717
              F R+   K  L  ++RHG+S       +Q  +  + +  ++ K  + S       L  
Sbjct: 1228 GTFTRMTTRKISLWQYMRHGTSWELTVSQQQTVNQYQALKADITKALYESDTYPWALLSR 1287

Query: 1718 CKAPKVLGDIVESIAGAIFLDS 1739
             +A K   D++ES+ GAIF+DS
Sbjct: 1288 LRAQKFFSDLIESVLGAIFIDS 1309


>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
          Length = 1701

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 182/709 (25%), Positives = 305/709 (43%), Gaps = 109/709 (15%)

Query: 319 NTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVPLVYQQAEVIREQTG 376
           N I +L TG+GKT +A+L+++    D  +  ++    A+F+   V L  QQA  +R  T 
Sbjct: 2   NGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAVRRCTN 61

Query: 377 YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECH 436
           + VG Y GE G D W    W  E    QVLV TAQ+ L+++  + + + +++++I+DECH
Sbjct: 62  FKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECH 121

Query: 437 HAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSV 496
           H    HP+   M   +   ++ K P V G+T   V +KG +   + A K+  LE      
Sbjct: 122 HGTGHHPFREFM-RLFTIANQTKLPRVVGLTG--VLIKG-NEITNVATKLKELEITYRGN 177

Query: 497 VCTIKDRKELEK---HVPMPSEVVVEYDK-----------AASLWSLHEQLKQMEVAVEE 542
           + T+ D KE+E    +   P+EV+V +             +A +   +  L  M + V+ 
Sbjct: 178 IITVSDTKEMENVMLYATKPTEVMVSFPHQEQVLTVTRLISAEIEKFYVSLDLMNIGVQP 237

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
                 RRSK      RD   K  ++Q++                      Y + E G +
Sbjct: 238 I-----RRSK-SLQCLRDPSKKSFVKQLFN------------------DFLYQMKEYGIY 273

Query: 603 CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
            A     S +       R    L VK     L    +L  CE +   + +   K+ D   
Sbjct: 274 AASIAIISLIVEFDIKRRQAETLSVK-----LMHRTALTLCEKIRHLLVQ---KLQDMTY 325

Query: 663 GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL---IKILLKYQHT 719
              +   N  E                 VI+  +      TPKVQ     +K+    +  
Sbjct: 326 DDDDDNVNTEE-----------------VIMNFS------TPKVQRFLMSLKVSFADKDP 362

Query: 720 EDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHNN------SQEMRTF 767
           +D   ++FVER      +  L+L  +    P L  V +   ++G NN      S   R +
Sbjct: 363 KDICCLVFVERRYTCKCIYGLLLNYI-QSTPELRNVLTPQFMVGRNNISPDFESVLERKW 421

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           Q +  I +FRDG   L++ +SV EEG+D++ CN V   D  KT   Y+QS+GRAR   + 
Sbjct: 422 Q-KSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAK 480

Query: 828 YILMI---ERGNLSHATF-LRNARNS-EETLRKEAIERTDLSHLKDTSRLISVDAVPGTV 882
           ++L     ER       +  R A N   E L+   +E+T+   L +       D  P T 
Sbjct: 481 FVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTE-PELYEIKGHFQDDIDPFT- 538

Query: 883 YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKP-----GGPTEYSC 936
                 GAV+  N+A+ ++H YC  +P+D +  + P F +++  E+          ++  
Sbjct: 539 ---NENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSAKGKHVI 595

Query: 937 KLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            + +P N    + +      +++ A+ +    ACK L+ +G   +  +P
Sbjct: 596 SINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVP 644



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 233/501 (46%), Gaps = 89/501 (17%)

Query: 1359 PSIMRRVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P++  +V+ +L+  +   K +  P    + L A+TA+S  + F  ER E+LGD++LK   
Sbjct: 1144 PTVRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSA 1203

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG--- 1473
            + +L  KY   +EG LT ++ ++VSN  L    +   +   +   +F P   W  PG   
Sbjct: 1204 TLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISL 1263

Query: 1474 ---VLPVFDEDTKDG---------DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE-- 1519
               VL ++ E+ +           D +L D+E  V  +   +D NYN + +    +G+  
Sbjct: 1264 PHNVLALWRENPEFAKIIGPHNLRDLALGDEESLVKGN--CSDINYNRFVEGCRANGQSF 1321

Query: 1520 LEGDSSSYRV--------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI-QVESDP 1570
              G   S  V        + +K +AD +EAL+GV     G   A  ++++  I + + D 
Sbjct: 1322 YAGADFSSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDK 1381

Query: 1571 E-------EVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
                    E+G     A V  + +    ++ + LE  L   FKDR  L++A+TH S P++
Sbjct: 1382 PLTQLLNLELGGKKMRANVNTTEIDGFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTN 1441

Query: 1622 GVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             ++  YQ LEF+GDA+LD LI+ ++F + T + PG LTDLR+A VNN   A + V+H+LH
Sbjct: 1442 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1501

Query: 1681 VHLRHGSSALDRQIRDFV------------------------------------------ 1698
              +   ++ L   I  FV                                          
Sbjct: 1502 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1561

Query: 1699 -KEVLEELLK--PGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             K + +E  K  P    F +  +   PK LGD++E++  A++LD  RD    W+V   L 
Sbjct: 1562 NKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLF 1620

Query: 1755 DPMVTPET--LPMHPVRELQE 1773
            +P +   T  +P++ +R+L E
Sbjct: 1621 EPELQEFTRKVPINHIRQLVE 1641


>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
          Length = 1435

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 183/727 (25%), Positives = 327/727 (44%), Gaps = 121/727 (16%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           ++R YQ+++L+ + K+N I  ++TG+GKT IA+L IR   ++L+R +   L  FL PKVP
Sbjct: 56  RSRGYQIEMLDASIKQNIIVAMDTGSGKTQIAILRIR---HELERCSNDKLVWFLAPKVP 112

Query: 363 LVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ   I +Q   Y      G    + W  Q+ W       +++V T QILL++L + 
Sbjct: 113 LAEQQYRAISQQLPAYQTKILTGADNLERWSTQKIWDAFLLNTRIVVSTPQILLDVLSNG 172

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-----TSKEKRPSVFGMTASPVNLKG 475
            I +  I LL+ DE HH VK  P + +M  FYH      +     PS+ G+TASP +   
Sbjct: 173 FITLRRIALLVFDEAHHCVKASPENKIMKNFYHARIDQLSETNDLPSILGLTASPTSKLT 232

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASL-----WSL 529
             S       +  LE  L +   T     +E+ ++V +P  + + Y K +++        
Sbjct: 233 EDS-------LRQLEQNLHACCKTPSFHHEEMMQYVHIPELLKISYQKDSTIPHNMEMKF 285

Query: 530 HEQLKQMEVAVEEAAQ----SSSRRSKWQFMGARD--AGAKEELRQVYGVSERTESDGAA 583
              L  +++  +   Q     + R+S  +FM ARD      ++L++ +            
Sbjct: 286 LSMLNDIDIESDPFFQRYKGKTDRKSIERFMRARDRKTPCLDQLKRCFT----------- 334

Query: 584 NLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQC 643
                   +++  GELG W     + +F++ +    R                       
Sbjct: 335 -------RVSHIYGELGHW----ASSTFISEIYRRTR----------------------- 360

Query: 644 ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK-- 701
                   +K AK++D    + E   ++        S + +  + V  IIG    +    
Sbjct: 361 --------EKRAKLID--QSWSEWDRDD-------SSFLCNALKPVVAIIGERCWNSTPD 403

Query: 702 -VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
            V+ KV+ L+  LL  + T   R IIFVE+   A++L  + +  P L+ +     +G++ 
Sbjct: 404 AVSQKVEHLVD-LLASELTGTSRGIIFVEQRATAVMLSHLISHYPELAHIMPDYFLGNSA 462

Query: 761 --------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
                   ++  +   M+ +I   + G+  LLVATSV EEG+D+  C++V+ FD  K + 
Sbjct: 463 FSDRKADITELSKPGDMKNSIDDLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLR 522

Query: 813 AYIQSRGRARKPGSDYILMI-ERGNLSHATF--LRNARNSEETLRKEAIERTDLSHLKDT 869
           +++Q RGRARK  S +++   E    +H  +  + +         KE I+R      ++ 
Sbjct: 523 SFVQRRGRARKQSSKFVIFYAEDDTATHKDWEAMEDIMKERYFNNKEFIDRLREEDDEED 582

Query: 870 SRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG 929
               S+        ++ESTGA+++L +A   +  +CS LP + ++  +P+FI+      G
Sbjct: 583 VEYESL--------RIESTGALLTLENARSHLSHFCSTLPCE-FTDTQPDFII---SNSG 630

Query: 930 GPTEYSCKLQLPC--NAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                + K+ LP   +  F + EG       ++A++     A  +L++ G   D L+P+ 
Sbjct: 631 IKDMLTAKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLMPEH 690

Query: 987 GSGEQQE 993
                +E
Sbjct: 691 CRTTDEE 697



 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 199/448 (44%), Gaps = 90/448 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTA 1393
            +P     I  LP    + A  +PS++  +   LLA +L   I  PV    I   L A+TA
Sbjct: 931  IPARQSCISMLPVGFAKFALFIPSLIHTIGRYLLAEELSQTILSPVGFQNIQLVLTAITA 990

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S +E   Y+R E LGD+ LK   S  L  ++P  HEG L++ +  +VSN  L++ A+  
Sbjct: 991  TSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDT 1050

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W      P+++                            + Y D+
Sbjct: 1051 GLDQFILTTCFTGAKWR-----PLYN----------------------------STYADN 1077

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
              + GE      S R LS+KTLADVVE+LIG   ++GG++     ++    ++   P   
Sbjct: 1078 AGKIGE-----KSTRELSTKTLADVVESLIGAAIIDGGENKVLRCLELFLPEINWQPSGE 1132

Query: 1572 --EVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCY 1626
              E+   S P      P  ++  +     E  +   F  + LL  +++H S   S ++ Y
Sbjct: 1133 RIEILFDSAPDFNDDCPRDIMSKI-----EPLIDYSFTKKALLATSLSHPSNLISRMT-Y 1186

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV----- 1681
            QRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +     V     
Sbjct: 1187 QRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALVNADFLAFLCMNTSTDVTREDV 1246

Query: 1682 ---------------------HLRHGSS-------ALDRQIRDFVKEVLEELLKPG--FN 1711
                                 ++ H S+       A+ R   + +++ +E+ L+ G  + 
Sbjct: 1247 CVSPTGEVEVTSSTHQVSLWQYMSHSSTDIVETQQAIARTFEE-LRDQIEKALRSGASYP 1305

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
               L    APK   DI+ESI GAIF+DS
Sbjct: 1306 WTLLSTLNAPKFFSDIIESILGAIFIDS 1333


>gi|348681952|gb|EGZ21768.1| hypothetical protein PHYSODRAFT_489360 [Phytophthora sojae]
          Length = 715

 Score =  191 bits (486), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 188/733 (25%), Positives = 299/733 (40%), Gaps = 110/733 (15%)

Query: 299 MPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           M + + R +Q ++LE A++KN +   +TG GKT +A+ L+     D     +   A F+ 
Sbjct: 1   MQQVELRAFQREILELAREKNVVMVGDTGIGKTFLAIALLSE--QDFSGDKR---AFFMA 55

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P   LV Q    IR+ +   V  YCG    D WDA +W+RE    +VLV T +I+ N+L 
Sbjct: 56  PTRQLVVQITAKIRQTSTLSVNAYCGSTA-DLWDAAQWERELQLTRVLVCTPEIVRNVLL 114

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
              + +  +NLL+ DECHH  K+HPY+ V+  F H       P +FG TA P        
Sbjct: 115 KGYVTLSRMNLLVFDECHHVTKRHPYAQVVKIFNHEDDAAALPRIFGTTACPTR------ 168

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVV-----------VEYDKAASLW 527
              CA K   L ++L  V        E     PM  E             VE D  +  W
Sbjct: 169 --HCAEK---LHAELKKVDLDQSQIAEFAAAAPMVYETYPVQQPWGVDGDVEGDPTSGSW 223

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
                 K++E  V+  A       K +   A D    E+ R+ +                
Sbjct: 224 VYDNMQKELE-EVKAIAVFEKLVKKGKSDAANDPVKLEKARKKF---------------- 266

Query: 588 KLRAINYALGELGQWCAYK----------VAQSFLTALQNDERANYQLDVKFQESYLSKV 637
            L+        LG WC Y+          +A S L  +     + + LD    ++ L   
Sbjct: 267 -LQNCVTIYKNLGPWCYYRFAELEFNRLAIAASLLLTVPG---SMFGLDQDAVKTMLLLT 322

Query: 638 VSLLQCEL-----VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVV-SGGEHVDV 691
                C       VE   +   A++ D E   VE    E+   EL +S V  S  E  DV
Sbjct: 323 AKRSGCNYACTAKVEKVEAILRAQLFDEEQATVE----EVVGAELSNSDVSDSENEAADV 378

Query: 692 IIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-------- 743
                    +  P+  S  ++        D + I+FV       VL   F E        
Sbjct: 379 TTSTP---NEEQPEGGSRARL--------DLQGIVFVNTRTECRVLSDYFNEKFASVEED 427

Query: 744 ---------------LPSLSFVKS--ASLIGHNNSQEMRTFQ---MQETIAKFRDGRVTL 783
                          +P +  V    AS++G  +  +  +FQ   M+ T+ KF  G + +
Sbjct: 428 EELDNEELTVESSGLMPEVPPVDQPFASILGRASRSDTASFQLPKMETTLRKFESGSIRV 487

Query: 784 LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
           L++T+V+ EG+D  QC +++  D   T    +Q +GRAR        + E G+L+H  + 
Sbjct: 488 LISTAVSVEGVDFPQCGLIVVMDRVGTSRMLMQLKGRARHEDGIVYYLAEEGDLAHEVYY 547

Query: 844 RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG--TVYQVESTGAVVSLNSAVGLI 901
           +      ET+ +       +  ++   R I+   +       ++ESTGAV+ L+S++  I
Sbjct: 548 KQLVREAETINQLEFSHERVETIQQQPRSIAAQMMGNGEQKIEIESTGAVLDLDSSIVCI 607

Query: 902 HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQ 961
           + +C  LPS  Y++          E+ GG + ++ +L LP     E        S   A+
Sbjct: 608 NQFCQSLPSRLYTVDVKRLYSFSEERYGGKSMFTAELNLPIELELEAFRSDPMPSKAGAK 667

Query: 962 QAVCLAACKKLHE 974
            +   +AC+KL E
Sbjct: 668 ASAAFSACQKLLE 680


>gi|339239929|ref|XP_003375890.1| putative RNase3 domain protein [Trichinella spiralis]
 gi|316975421|gb|EFV58865.1| putative RNase3 domain protein [Trichinella spiralis]
          Length = 1903

 Score =  191 bits (485), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 241/497 (48%), Gaps = 61/497 (12%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            ++L A+TA++  ETF  E  E+LGD++LK+V + + +  Y + HEG+L+ +R +M+SN  
Sbjct: 1402 EVLHAITASAVAETFNLEGLEILGDSFLKYVTTVYCYKAYSKMHEGKLSLLRSRMISNYN 1461

Query: 1446 LYQYALSKGLQSYIQADRFAPS-RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
            LY+    K +  Y+ A +F PS  W  P  +P+   + +  D+++ ++E  + E +L  D
Sbjct: 1462 LYKLGKRKNIPQYMIAIKFDPSDTWLPPCYVPL---NCEVQDTAI-EEEDKLMEQRLMND 1517

Query: 1505 KNYNEYEDDDMEDGE--LEGDSSSYRV-----------------LSSKTLADVVEALIGV 1545
            ++  E + +    G     G  S+  V                 +S K +AD VEALIG 
Sbjct: 1518 ESVVEQQRNVETTGRQATTGSKSTKWVPEDLSQLVPFNLLAQQGISDKGVADCVEALIGA 1577

Query: 1546 YYVEGGKDAANHLMKWIGIQVESDPEEVG---CPSRPACVP------------------- 1583
            Y +  G       + W+G++VE +    G   C   P  +                    
Sbjct: 1578 YLLFCGTRRTLDFLHWLGLKVEDEVSLRGFSRCIVSPTPISFANFDLYGVTKSALINNSA 1637

Query: 1584 --ESVLRSV----DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAV 1636
              E+ L+++         ED +  +FKDR LLV+A+TH++   + V+ CYQRLEF+GDAV
Sbjct: 1638 DSEACLKTLWNRFSLSQFEDIIGYRFKDRSLLVQALTHSTYFYNEVTDCYQRLEFLGDAV 1697

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNN---ENFARVAVKHKLHVHLRHGSSALDRQ 1693
            LDHLIT+HL+       PG LTDLR+A            +  K    +++   ++  DR+
Sbjct: 1698 LDHLITRHLYEDKRMHSPGMLTDLRSALYFMYLCPGLMMMIEKFVKTLNIIKENANFDRE 1757

Query: 1694 IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
            +R     +L   L  G         + PK LGDI ES+AGAI+LDSG     VW ++  +
Sbjct: 1758 VR---VHLLNLYLLEGEEENAEEQVEVPKALGDIFESVAGAIYLDSGCSLHTVWCIYYNM 1814

Query: 1754 LDPMVTPETL--PMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQ 1811
            L   +    L  P+ P+R+L E    + +    + +       V V ++G    V     
Sbjct: 1815 LREEIEKCCLNPPISPIRDLLELEPDRVKFSRVERNAVEGKVKVAVTVEGKGRFVGAGRS 1874

Query: 1812 KKMAQKLAARNALAVLK 1828
             ++A+  AA+ AL  LK
Sbjct: 1875 YRIAKSTAAKRALRYLK 1891



 Score =  136 bits (342), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 168/758 (22%), Positives = 320/758 (42%), Gaps = 127/758 (16%)

Query: 311  VLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVPLVYQQA 368
            +++  ++ N IA L +   +  ++V+LIR   + L++     +   V+LV +   +   A
Sbjct: 21   LVDIGRRCNLIAPLGSAVDRLYVSVMLIREFSSMLRKPCSKNRRWCVYLVDRATSIKSVA 80

Query: 369  EVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAIN 428
            + IR  T   VG    ++  +    Q    + +  ++ V T    + +L  S I      
Sbjct: 81   DRIRIYTNLNVGEIFCDIHLESEAKQYCAAQMEGNEIFVTTGTHFMKLLDLSFIPRNCYC 140

Query: 429  LLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN--LKGVSSQVDCAIKI 486
            L+I ++CH A++ HPY  ++ EF +   KE RP + G+T S +N  +KG     DC    
Sbjct: 141  LVIFEDCHLAIRSHPYRNIVKEFLNI-EKEYRPRLLGLTMSLINDEVKG-----DC---- 190

Query: 487  CNLESKLDS---VVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
              L+  +D+   V+C               S+VV+      ++ S  ++  + +  V   
Sbjct: 191  --LQYGIDTMQEVLC---------------SKVVL------TMLSPAKKFLKRDTKVVLI 227

Query: 544  AQSSSRRSKWQFMG---ARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELG 600
            +  S+    W            +   + +   +    +     ++I+ L  + +   E+G
Sbjct: 228  SYPSTSLFSWDMFDNYILHLLVSPTFILENITLPNDDDMICMQHVIESLNKVKWIHDEMG 287

Query: 601  QWCAYKVAQSFLTALQNDERAN----YQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
             WCA+KV Q     L   +R        L ++  ++YL  +  + +  +       K+ K
Sbjct: 288  PWCAWKVCQKQEMQLNRMKRIKPGTMQYLLIEMGQTYLRCLRKVFENHV-------KNLK 340

Query: 657  VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
               S   ++ G      E   L SH           + +  AD +  P            
Sbjct: 341  NFSSLCAYITGHVYSFIE---LLSHNK---------MRSVFADDENFP------------ 376

Query: 717  QHTEDFRAIIFVERVVAALVLPKVFAELPSL-----SFVKSASLIGHNN-----SQEMRT 766
               E+F  I+F +    A V   +   L +L      ++K   L+G+++     S+E   
Sbjct: 377  ---ENFCCIVFFKHRYIAYVYKILLKTLQNLWPDMFGYLKVDFLVGYDSETADASKEALH 433

Query: 767  FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
             +  E + KFR   + LL+ T V  +G+++R  N VI +D  +++ ++I  + RA KP S
Sbjct: 434  ERQHEVLKKFRTKELNLLLTTRVLAKGIELRGANCVIHYDEPESLRSFIYVKNRANKPNS 493

Query: 827  DY-ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS-VDAVPGTVY- 883
             Y IL+ E  +   A+ +    + ++ +R  ++    L +  D   L   +D      Y 
Sbjct: 494  HYFILLSECTSALSASVINTFVDIDKIIRNYSL----LDYEDDNLELPDDLDDTFKPYYP 549

Query: 884  --------------QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER---HE 926
                          ++++     +L +++ +++ YC +LP D +S L  +  +E+    E
Sbjct: 550  KKSEEVGDDDEEADKLKNNNVCATLANSIRIVNHYCQRLPCDIFSRLVADCHVEKVMSGE 609

Query: 927  KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-D 985
                P +Y   L+LP N+P     GP   S+ LA+++V L   K LH  G   D L+P  
Sbjct: 610  CAPSP-KYRATLKLPINSP-----GPTVDSVMLARRSVALETVKLLHRRGELYDSLMPIG 663

Query: 986  KGSGEQQEKVDQNDE-----GEPLPGTARHREFYPEGV 1018
            K         D++DE     G+  PG+++ R++Y + V
Sbjct: 664  KEMVASLLIADEDDEEWPVTGKACPGSSKRRQYYNKAV 701



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 20/161 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            ++V ++   +T  + FP  E       Y S+  Y+ QKYG+E+    QPL+    V Y  
Sbjct: 907  YFVLNVDEGLTPLTKFPDDE-------YESFKSYFWQKYGLEIYHDDQPLL---NVDYTA 956

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVF----LPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
            + L+  F   + +    E   D    V     L PEL  IHP+P S  R  Q LPSI+ R
Sbjct: 957  SRLNRLFPRRQARRESLEADYDTMSVVAQKQKLVPELVDIHPIPASTWRCLQYLPSILYR 1016

Query: 1365 VESMLLAIQLKDKI------NYPVPASKILEALTAASCQET 1399
            + S+LLA +L+ ++      N P P       +  A  +ET
Sbjct: 1017 LSSLLLANELRLQVLLDEYNNDPTPDGYCWAPIDKAWLKET 1057


>gi|154300125|ref|XP_001550479.1| hypothetical protein BC1G_10438 [Botryotinia fuckeliana B05.10]
          Length = 1398

 Score =  191 bits (485), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 200/740 (27%), Positives = 328/740 (44%), Gaps = 130/740 (17%)

Query: 282 NQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI 341
           N++ +   G+K E     P    R YQL++LE++ K+N I  ++TG+GKT +AVL    I
Sbjct: 55  NEDDDNSAGEKGEIVIVTP----RTYQLEMLEESLKRNVIVAMDTGSGKTHVAVL---RI 107

Query: 342 CNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQR-WQRE 399
             +L+R     +  FL P V L  Q  E ++     V +    G  G D W  QR W   
Sbjct: 108 LAELERMKPGKIIWFLAPTVALCAQHHEYLQLNIPSVLIKMLIGADGVDRWTEQRQWDTV 167

Query: 400 FDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-TSKE 458
               +V+V + Q+LL+ L H  ++M  ++L+I DE H+ V K P + +M  FYH   S  
Sbjct: 168 LKDVKVVVSSYQVLLDALTHGFVRMGRLSLIIFDEAHNCVNKAPGAKIMKSFYHPYKSIF 227

Query: 459 KRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVV 517
             P + G++ASPV      S       + ++E  LD++ CT K  R +L   V +P   +
Sbjct: 228 PLPHILGLSASPVMRSSPQS-------LSDIEETLDAICCTPKIHRADLRLRVKLPLLSI 280

Query: 518 VEYD---------KAASLWSLHEQLKQME----VAVEEAAQSSSRRSKWQFMGARDAGAK 564
           + Y            ASL  + + L   E    + ++ +    S+R   + + +    ++
Sbjct: 281 IYYTPESNIIVTKTVASLRKIVQSLNIFEDPYVLTLKRSDSEKSQRELAKVLKSFKTYSQ 340

Query: 565 EELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQ 624
            +L+ +         D  +N I         L ELG W A                    
Sbjct: 341 TQLKSI---------DKTSNEI--------ILVELGPWAA-------------------- 363

Query: 625 LDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD----SENGFVEGGTNEIEEGELLDS 680
                 + Y+S VV+         A+S KD  +V+    +E  ++     ++E       
Sbjct: 364 ------DYYISTVVTRYL-----KAMSAKDTFIVEDSPAAEKLYIAKALRQVE------- 405

Query: 681 HVVSGGEHVDVIIGAAVAD-GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPK 739
                      I  + ++D GK++ KV+ L+ I+   Q    F AIIFV+      VL  
Sbjct: 406 -----------ISPSTLSDTGKISNKVEKLLGII--AQQKPPFSAIIFVQERATVSVLAH 452

Query: 740 VFAELP------SLSFVKSASLIGHNNSQ---EMRTFQMQETIAKFRDGRVTLLVATSVA 790
           + +  P       +  +   SL G    Q    +   Q ++T++ F+ G++ +L+AT+V 
Sbjct: 453 LLSHHPLTKDRFKIGTMVGTSLNGKRTDQIGELVDVNQQKDTLSSFKRGKIDILIATNVL 512

Query: 791 EEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE 850
           EEG+D+  CN+VI F     + +++Q RGRAR+  S  IL+   G+   AT   N    E
Sbjct: 513 EEGIDVPACNLVICFSKPANLKSFVQRRGRARQQDSKLILLDASGD--KAT---NWHELE 567

Query: 851 ETLRKE-AIERTDLSHLK--DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQ 907
             +R+E   E  +L H+   +T+   S D     V ++ESTGA + L+SA+  ++ +CS 
Sbjct: 568 RKMREEYGKEMRELQHIYEIETADEQSED---DRVLRIESTGAQLDLDSALPHLYHFCSV 624

Query: 908 LPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP--CNAPFEKLEGP-VCSSMRLAQQAV 964
           L +  +  LRP+F+   +    G      K+ LP   + P    E      S R A +  
Sbjct: 625 LTTKDFVDLRPDFV---YSSELGSEYVRAKVILPGSVSKPLRVHESRGSWLSERSAAKDA 681

Query: 965 CLAACKKLHEMGAFTDMLLP 984
              A   L+  G   D LLP
Sbjct: 682 AFEAYSALYRGGLVNDNLLP 701



 Score =  110 bits (275), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 153/599 (25%), Positives = 233/599 (38%), Gaps = 155/599 (25%)

Query: 1311 LSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLL 1370
            +S R +   + + E      K +   LP   C    +P  L R    +PSI   +E  L+
Sbjct: 891  VSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRFGMMIPSITHHIEVQLV 950

Query: 1371 AIQLKDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
              +L   I   +  S    I  A+T AS      Y+R E LGD+ LK   S  L  ++  
Sbjct: 951  VDRLSRTILKDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILKLCTSVQLVAEHLD 1010

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
             HEG L+ M+ ++VSN    + A   GL  YI   +F  ++W      P++ +D      
Sbjct: 1011 WHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKWR-----PMYVDDL----- 1060

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
                    V E K                           R +SSK L+DVVEALIG   
Sbjct: 1061 -------VVTEQK--------------------------TREMSSKILSDVVEALIGASL 1087

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRG 1607
                                          RP               +E  L   F  + 
Sbjct: 1088 ------------------------------RP---------------VEQILAYTFTKKS 1102

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            LLVEA+TH S  +SG    +RLEF+GD++LD++I   ++   T L    +  LR+A VN 
Sbjct: 1103 LLVEAMTHPSY-TSGTQSLERLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNA 1161

Query: 1668 ENFARVAVK---------------HKLH-VH----------LRHGS--------SALDR- 1692
            +  A + ++               H++H  H          LRH S         AL R 
Sbjct: 1162 DFLAFLCMEMSIDQNVTNLTEGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRH 1221

Query: 1693 -QIRDFVKEVLEELLK-PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
             ++RD   ++LE +     F    L    A K   D++ES+ GA+++DSG    V  Q+ 
Sbjct: 1222 AELRD---QILEAIYTGDTFPWALLSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQLI 1277

Query: 1751 QPL-----LDPMVTPETLPMHP------------VRELQERCQQQAEGLEYKASRSGNLA 1793
            + +     +  ++      MHP            VR +  R +   +  E  A     + 
Sbjct: 1278 ERMGVLRYMRRILKDGVRIMHPKEELGIVADSENVRYVLRREKMGGDATEVNADADEEVR 1337

Query: 1794 T---VEVYIDGVQ-VGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKN 1848
            T     V++ G + V V    +K+  Q  AA  A+ +LK +   E +  G   GKKRK+
Sbjct: 1338 TEYRCTVFVGGEEIVEVRGGARKEEIQARAAEQAVRILKAR-GHEKRNGGAGEGKKRKS 1395


>gi|188593364|emb|CAO78751.1| Oikopleura cytoplasmic RNAse III enzyme Dicer [Oikopleura dioica]
          Length = 1814

 Score =  190 bits (483), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 224/473 (47%), Gaps = 94/473 (19%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P  +IL+ LT +   + F  ER E+LGD +LK+ V+ +L+ KY  +HEGQL+  R + 
Sbjct: 1289 PTP-DQILQTLTLSKSSDGFNLERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKK 1347

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS----RWAAPGVL--------------------- 1475
            VSN  L++  +   +   + A++F  +     W  PG                       
Sbjct: 1348 VSNRNLFRLGVYNDIPGRMVAEQFMQNDTGGNWLPPGYFNKDHAALESDDSEDDDGFEFE 1407

Query: 1476 --------PVFDEDTKDGDSSLFDQEKSVAEDKL--GTDKNYNEYEDDDMEDGELEGDSS 1525
                     + ++D++   +  FD E     D++  G+      + D   +    E D S
Sbjct: 1408 PAKGERPQEINEDDSEIESAEDFDGEDISMVDEMLQGSSNQLMSFLDRKKQLPGDEFDIS 1467

Query: 1526 SYRVLSSK-----------------------TLADVVEALIGVYYVEGGKDAANHLMKWI 1562
             ++ L +K                       ++AD +EALIG Y    G +A    + ++
Sbjct: 1468 VWKPLDTKGKPINTEEPLIYNHYSDQYLTDKSIADCMEALIGAYLKATGIEATQQFLCYM 1527

Query: 1563 GIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
            G+ V            P+   + + R+  +   E  +   FK++G L++++THAS   + 
Sbjct: 1528 GLIV-----------LPSSALDKLTRT--YGEFEKKIGYTFKNKGYLLQSLTHASYQYNQ 1574

Query: 1623 VS-CYQRLEFVGDAVLDHLITKHLFFSYTN-LPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
            V+ CYQRLEF+GDAVLD LIT+HLF   T    PG LTDLRAA VNN  FA +AVK   H
Sbjct: 1575 VTNCYQRLEFLGDAVLDFLITRHLFDHPTKRFSPGELTDLRAALVNNNIFAALAVKFDFH 1634

Query: 1681 VHLRHGSSALDRQIRDFV--------KEVLEELLK----------PGFNSFGLGDCKAPK 1722
             +L   +  L   IRD+V         E +E +LK             +     D + PK
Sbjct: 1635 KYLYALTPDLHNVIRDYVLYCQTRQDVEGMEAVLKRIRLEEEPEEEEGDHEDSEDIEVPK 1694

Query: 1723 VLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--PMHPVRELQE 1773
            VLGDI ES+AGAI+LDSG +   VW V++P+L   +   ++  P  P+REL E
Sbjct: 1695 VLGDIYESVAGAIYLDSGMNLDAVWGVYRPMLQKYIDKYSINPPRSPIRELLE 1747



 Score = 73.9 bits (180), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 14/144 (9%)

Query: 1243 AHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGR 1302
            A +  RFYV  I+Y+M  +S FP  +       Y S+  YY Q++ + L  +KQPL+   
Sbjct: 931  APTQNRFYVAEIQYDMDPDSPFPADD-------YESFRQYYMQRWALCLTNEKQPLLDVD 983

Query: 1303 GVSYCKNLLSPRFEHSEEQ-------EGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
                  NLL+PRF   + +       E + ++  DK    +L PE+  +HP+  SL R A
Sbjct: 984  HTDCRLNLLTPRFVTQKGRALPASALEKKRQKYEDKANRQYLIPEILDVHPVSASLWRKA 1043

Query: 1356 QRLPSIMRRVESMLLAIQLKDKIN 1379
              LPSI+ R+  +L A  L+ +I+
Sbjct: 1044 VCLPSILHRITCLLAAEDLRRRIS 1067



 Score = 45.1 bits (105), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 113/541 (20%), Positives = 201/541 (37%), Gaps = 135/541 (24%)

Query: 702  VTPKVQSLIKILLKYQ---------------HTEDFRAIIFVERVVAALVLPKVFAEL-- 744
            VT KV  L+ +L +Y+                T      + V     A  L K+  +   
Sbjct: 373  VTTKVARLMDVLREYKPEVKQKNPDSPGPTPFTNRLWGCVLVNERPVAKYLGKILKDAAR 432

Query: 745  --PSLSFVKSASLI---------GHNNSQEM--RTFQMQETIAKFRDGRVTLLVATSVAE 791
              P L+ + S +L          GH + +E+     + +E + KFR     +L+A +  E
Sbjct: 433  ADPDLAHISSQALCQLAKVDNPNGHLDEEEIADEKKKQEEALHKFRTREANILIAQAETE 492

Query: 792  E----GLDIRQCNVVIRFDLAKTVLAYI-QSRGRARKPGSDY-ILMIERGNLSHATFLRN 845
                   DI +CN+V+RFD   + L Y    R  +++  + Y IL+ ++  +     L  
Sbjct: 493  NEAHRHFDIPKCNLVVRFDAPGSYLRYDGGKRLLSQQNDALYGILINKKEKIQFCRMLEE 552

Query: 846  ARNSEETLRKEAIERTDLSHLKDTSRL-ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFY 904
             +  EE L+     R  L+     + L + +D      +  E        N    LI+  
Sbjct: 553  FKMLEEYLKN----RASLAEEAGPAELCLDLD----VTHLFEDMPKDYHNNENGALINSI 604

Query: 905  CSQLPSDRY---SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCS----SM 957
             S+LP D +   S+LR    +          ++   L LP N+    L G + +     +
Sbjct: 605  YSRLPCDSFTQLSVLRKTLQL-------ANGKFQTSLVLPNNS---HLRGILLAIQKKPL 654

Query: 958  RLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLP------------ 1005
              A+++  L AC KL  +G   D L     S ++ +K     E +P P            
Sbjct: 655  NCAKRSAALEACTKLRILGELDDFLF---NSSKEMDKY--KFEIDPFPNPLSRKRKPPPG 709

Query: 1006 --GTARHREFYPEGVADILQGEWILSGRDGCTG-------SKLFHLFMYTVKCVNNG--- 1053
              G  + R+ YP  +   L+ +   S  +G +          ++ + M+    + +    
Sbjct: 710  MEGGPKRRQKYPRHIPRSLRAKPKDSKAEGASALPVPEKECYVYRISMFYRHGLADKYNY 769

Query: 1054 -----------------ISKDPFLTQVSDFAVL------------------FSSELDAEL 1078
                             IS  P    +S F++                   FS+    +L
Sbjct: 770  RGRKLHRPEDFSKSFAIISALPIPHTISGFSIFDRSGEEGVNLEPIHQQVCFSA---TQL 826

Query: 1079 ASLKNFHVRLMSIVLDVDVEPYTTPWDPAKA---YLFVPVVSDKSVDPMNELDWD-LVEK 1134
              +K+FH  ++  V+ ++       ++P K+   YL  PV  D  ++   E+DWD L E 
Sbjct: 827  EIIKSFHQYIIQDVIRIERPGGVVQFNPDKSPVPYLIAPVDCDNGIE--WEIDWDYLTES 884

Query: 1135 I 1135
            I
Sbjct: 885  I 885


>gi|303315249|ref|XP_003067632.1| Type III restriction enzyme, res subunit family protein
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240107302|gb|EER25487.1| Type III restriction enzyme, res subunit family protein
           [Coccidioides posadasii C735 delta SOWgp]
          Length = 1448

 Score =  190 bits (483), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 184/731 (25%), Positives = 334/731 (45%), Gaps = 97/731 (13%)

Query: 290 GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
           G     +  +P  +AR YQL++L ++ ++N I  ++TG+GKT IA+L I+    +L+R  
Sbjct: 33  GTSKSQEAPLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ---RELERCP 89

Query: 350 KKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLV 407
                 F+ P V LV QQ   I +Q   +      G      W  ++ W       ++++
Sbjct: 90  AHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVSHWSTKKIWDDILLNIRIVI 149

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----RPSV 463
            T Q+LL+ L +  + +  I+LL+ DE HH V+  P + +M +FYH   +E+     P +
Sbjct: 150 STPQVLLDALSNGFVNLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLPHI 209

Query: 464 FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDK 522
            G+TASP      + Q D  +    LE  L++V  T K  R+E+ + + MP    +EY  
Sbjct: 210 LGLTASPTTR---ARQTDLEV----LEINLNAVCVTPKMHREEMMQFIHMPEYCSIEYQP 262

Query: 523 AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGAR-DAGAKEELRQVYGVSERTESDG 581
               +S    ++++ V + E    +    K  FM  R D  +++ L   +   +    D 
Sbjct: 263 DVQNFS--SIVEKLSVIINELDIENDPFVK--FMRRRNDLKSRQRLLDAFENKKTPCLDQ 318

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
               +++ R I+    ELG W +                          E +L++ +  L
Sbjct: 319 LKRCLRRSRVIHR---ELGPWAS--------------------------ERFLTRCIMGL 349

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
           + + +  A   + A     +N ++            + S VVS  E     +G      +
Sbjct: 350 KSKQI-NASGPQWADWDREDNSYMLN----------VLSQVVSSTE-----MGVQNPPDE 393

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ KV  LI  L+  +H      I+F E     ++L ++ +  P    +K+ + +G + S
Sbjct: 394 LSRKVHKLIDFLV-LEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTTAFLGSSAS 452

Query: 762 QEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
              ++              I   R G+  L++AT+V EEG+D+  C++VI FDL K + +
Sbjct: 453 VSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRS 512

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRL 872
           +IQ RGRARK GS + L +   + + ++ L      E+T+++  +E +  L H++    L
Sbjct: 513 FIQRRGRARKKGSKFALFLHSEDRATSSELHLM---EKTMKQLYLENKRTLEHIQ---YL 566

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +V+      ++V STGA+++L++A   +  +C  L S  +    PEF++E  +  G   
Sbjct: 567 ENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTL-SAEFIATDPEFVLEGDDTTG--- 622

Query: 933 EYSCKLQLP--CNAPFEKLEGPVC-SSMRLAQQAVCLAACKKLHEMGAFTDMLLP----- 984
            +S K+ LP   +    +  G +   + ++A++     A   L+E G   D L+P     
Sbjct: 623 -FSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMPAHHHI 681

Query: 985 -DKGSGEQQEK 994
            D+   EQ EK
Sbjct: 682 DDEDGLEQVEK 692



 Score =  120 bits (301), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 191/456 (41%), Gaps = 98/456 (21%)

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---IL 1388
            T   F P   C +  LP    + A  +P ++  +E+  +A +L   I +PV  S    +L
Sbjct: 917  TAKCFYPANNCSVDRLPVEYSQFALFIPCLIHSIENYFIANELAQTILHPVGFSNLSLVL 976

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
             A+++++ +E   Y+R E LGD+ LK   S  L   +P   EG+LT  +  +VSN  L  
Sbjct: 977  TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLAN 1036

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL  +I    F  ++W                                       
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWRP------------------------------------- 1059

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
             Y  D +  G++   +   R +S+K LADVVEALIG   ++GG++   + +K     ++ 
Sbjct: 1060 SYNTDHINTGDM---TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKW 1116

Query: 1569 DPEEVGCPSRPACVPESVLRSVD----------FHALEDALKIKFKDRGLLVEAITHASR 1618
             P          CV  ++L                 +E  +   FK + LL+ A+TH S 
Sbjct: 1117 SPLN-------ECV--NILHHQQDSFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSS 1167

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA------- 1671
              SG S YQRLEFVGD++LD ++ + LF S        +  +R A VN +  A       
Sbjct: 1168 KGSGHS-YQRLEFVGDSILDIIVVQELFESPRGFHHFDMHLMRTALVNADFLAFLCMNAY 1226

Query: 1672 --------------RVAV-----KHKLHVHLRHGSS-----ALDRQIRDFVK--EVLEEL 1705
                          RV V     +  L   ++H +S     A  R  + + K  E ++E 
Sbjct: 1227 REEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQYEKLHEEIDEK 1286

Query: 1706 LKPGFNSFGLGDCK--APKVLGDIVESIAGAIFLDS 1739
            L+          C+  A K   DIVESI GAIF+DS
Sbjct: 1287 LRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322



 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 24/161 (14%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            + F +  L++ AI+  S  +   S YQRLEF+GD++L    +  L   +   P GRLT  
Sbjct: 967  VGFSNLSLVLTAIS--SSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMR 1024

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--FGLGDC 1718
            +   V+N   A  A++           + LD+ I    K       +P +N+     GD 
Sbjct: 1025 KGNVVSNGYLANAALQ-----------TGLDKFI--LTKPFTGAKWRPSYNTDHINTGDM 1071

Query: 1719 KAP------KVLGDIVESIAGAIFLDSGRDTSV-VWQVFQP 1752
              P      KVL D+VE++ GA  +D G +  +   ++F P
Sbjct: 1072 TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIP 1112


>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  190 bits (482), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 181/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y GE G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  156 bits (395), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGBFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  190 bits (482), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 181/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y GE G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGEQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAP------GVLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1556

 Score =  190 bits (482), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 242/943 (25%), Positives = 404/943 (42%), Gaps = 168/943 (17%)

Query: 292  KSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK 351
            K E     P    R YQ ++L+++ ++N +  L+TG+GKT IA+L ++   ++++  + K
Sbjct: 4    KEEVDLPSPGIVTRGYQQELLDESLRRNIVIALDTGSGKTHIAMLRMK---HEVEHTSNK 60

Query: 352  MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTA 410
            + + FL P V L+ QQ +VI       VG   G    D W DA  W       +++V T 
Sbjct: 61   V-SWFLAPTVALIEQQRDVIAAAIPVSVGLISGASAPDQWKDADLWLNILSQHRIVVSTP 119

Query: 411  QILLNILRHSIIKM-EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK--------RP 461
            QILL+ LRH  I + + I+LL+ DE HHA+ KHPY+ +M  FYH              RP
Sbjct: 120  QILLDALRHGYINLGKHISLLVFDEAHHAMSKHPYNEIMRGFYHPLPPRHGCDIQAIVRP 179

Query: 462  SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEY 520
            ++ G+TASP+      S  D A     +ES LDSV+ + + +R+EL   V  P    + Y
Sbjct: 180  AILGLTASPIY-----SASDIAKSFREIESNLDSVIRSSRFNREELATFVHRPEFRYILY 234

Query: 521  DKAASLWSLHEQLKQMEVAVEEA--AQSSSRRSKWQFMGARDAGAKEELR---QVYGVSE 575
            +++    +L  +      AV ++   +S       +   A+    K+  R   ++    +
Sbjct: 235  NQSTFTGALSSRYLNTLYAVVDSLDIESDPYVIALRSQLAKLPSGKQRNRVDQKLSKALD 294

Query: 576  RTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE---S 632
            + ++     L   LR       ELG W A     S + A  ++   +  +   +Q+    
Sbjct: 295  KRDTFTHKGLRDFLRTATDIYAELGSWPADWYITSIIQATNDEIDLHTGVLGSWQDHEKH 354

Query: 633  YLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVI 692
            YL  ++S +  E +            D E                   H+ +G       
Sbjct: 355  YLLNILSRVPVETLS----------YDPE-------------------HIRAG------- 378

Query: 693  IGAAVADGKVTPKVQSLIKILLKYQ-----HTEDFRAIIFVERVVAALVLPKVFAELPSL 747
                     +TPKV  L+K L   +       E F  IIFV R  A L L +V + LP +
Sbjct: 379  ---------ITPKVHELLKCLRSEERRSRAEDEPFSGIIFVTRRDAVLALARVISSLPEM 429

Query: 748  SF-VKSASLIGHNNSQEMRTF------QMQET----IAKFRDGRVTLLVATSVAEEGLDI 796
            +   +   L+G + S +   F       ++ET    +  FR G   L+V+T+VAEEG+DI
Sbjct: 430  TADFQIGCLLGTSASFKRHAFLDISRSLLKETATQVLKDFRTGDKNLVVSTAVAEEGIDI 489

Query: 797  RQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKE 856
            + C  VIRFD    ++++ QSRGRAR+  S +++M           L +   SE+    +
Sbjct: 490  QACGTVIRFDPPDNMVSWAQSRGRARRRRSTFLVM-----------LGSDSASEKIALWQ 538

Query: 857  AIERTDLSHLKDTSRLISVDAVPGT------VYQVESTGAVVSLNSAVGLIHFYCSQLPS 910
             +E+T +    DT+R    D  P T       + V  TGA ++L S++  ++ +C+ LP 
Sbjct: 539  EMEKTMIKLYTDTTR--GNDPPPETELEEDLEFVVPHTGAKLTLESSISHLYHFCAILPH 596

Query: 911  DRYSILRPEFIMERHEKP---------------GGPTEYSCKL--QLPCNAPFEKLE--- 950
              +++  P F ++  E                 GGP   +C L  Q+P     E  E   
Sbjct: 597  SSHTVQGPIFELDPPEYDEGWHSLDPRYAPAPYGGPWGATCTLPRQVPKEVKTEDGETIK 656

Query: 951  ------GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE----KVDQNDE 1000
                    V  + + A+      A  +L+  G   D LLP   + ++ E    K+   D 
Sbjct: 657  LRKFSTSRVYPTKQSARNHAAFFAYHQLYLAGLLNDHLLPLTSAIDKDEDGAVKLLLQDI 716

Query: 1001 GEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS----- 1055
             +    T    ++ P    +  Q  W      G  G  L  LFM T + +    +     
Sbjct: 717  EKRAGLTKTSIQYDPWQATEGAQTWWY--NEVGIEG--LPRLFMLTRQRLEALSADELPV 772

Query: 1056 -----KDPFLTQVSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAY 1110
                 +DP  T+V  F+V    E +  + + + +  R+ S   D  ++P    +     Y
Sbjct: 773  LYIPGRDPPATRVEIFSVPEEMEDEGAVIAAQAYTQRMFSSTYDKHMDPDRMDF----PY 828

Query: 1111 LFVPVVSDKSVDPMNELDW----DLVEK---ITKTDAWTNPLQ 1146
            LF+P+  D++ D   E +W    + ++K   + K   W  PL+
Sbjct: 829  LFLPM--DEAPD---EAEWRVRREWMQKRLSVGKCTRWEGPLR 866



 Score =  154 bits (388), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 174/634 (27%), Positives = 274/634 (43%), Gaps = 114/634 (17%)

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            PLI        +N L P  + ++    +G+ +L       L P+   +  +    ++ A 
Sbjct: 924  PLIVAEAPPRRRNFLEP-LDSADAGLSDGKPVL-------LHPKYTTVDLVCADDIQFAL 975

Query: 1357 RLPSIMR--RVESMLLAIQLKDKINYP----VPASKILEALTAASCQETFCYERAELLGD 1410
             LPS++R   + + + A+++    + P    +P + +  ALTA    +   Y+R E LGD
Sbjct: 976  LLPSLLRFASISATVHAVRITLFASSPRLASIPFTLLRPALTAPVATDLVSYQRLETLGD 1035

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWA 1470
              LK++VS  L  +YP  HEG L R +   V+N  L + AL  GLQ++I  DRFA  +W 
Sbjct: 1036 TVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWIIRDRFAAKKWR 1095

Query: 1471 APGV-------LPVFDEDTKDGDSSLFDQ------EKSVAEDKLGTDKNYNEYEDDDMED 1517
               +            E+  +G ++   +      + +V  + +G  K   E  D +   
Sbjct: 1096 PRYIGDAASAPASPVAENKNEGAAADIGKGDDPAGDDNVEAEDVGNAKKAGEGNDKENGK 1155

Query: 1518 GELEGDSSS------------------YRVLSSKTLADVVEALIGVYYVEGGKDAANHLM 1559
               +G++++                   + LS+K LADVVE+LIG  Y  GG D A   M
Sbjct: 1156 EVAQGETTNGNKAADADKKKKKKKKAKTQELSTKMLADVVESLIGAAYEHGGFDLATECM 1215

Query: 1560 KWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKI-------KFKDRGLLVEA 1612
            +   + +++        + PACV +S+    +   L  AL++       KF  R LLVEA
Sbjct: 1216 QLFHLGIDT------WETVPACVEKSLGHIEELGELPPALELVERMVGYKFSKRVLLVEA 1269

Query: 1613 ITHASRPSSGV---SCYQRLEFVGDAVLDHLITKHLF-FSYTNLPPGRLTDLRAAAVNNE 1668
            +THAS   +GV     Y+RLEF+GDAVLD ++T  L+     N  PG +   + A VN+ 
Sbjct: 1270 LTHASY--TGVIETQSYERLEFIGDAVLDMIVTDFLYHVPGKNYTPGHMHLRKEALVNSH 1327

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQ---IRDFVKE--------------VLEEL------ 1705
              A   +    HV +     A + Q   + D   +              VL++L      
Sbjct: 1328 LLAFACM--NTHVDVDASMPAWNAQDGIVLDTATQRIPLCRCLLHSSPRVLDDLNLTYAR 1385

Query: 1706 -LKPG------------FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
              K G            +    L   +APK + D+ ES+ GAIFLDS  D   V  V   
Sbjct: 1386 WEKHGAGIRRALEHDVIYPWAALTSLQAPKFVSDMFESVLGAIFLDSHGDLGTVRAVLAK 1445

Query: 1753 L-----LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVA 1807
            L     ++ +V  E   +HPV  L     +     E K+ +     +  V IDGV+   A
Sbjct: 1446 LGIVHIMERIVADEVDVLHPVSRLGIWAAKNERKWEIKSEKIDGDISCYVKIDGVEEFRA 1505

Query: 1808 QNPQKKMAQK-----LAARNALAVLK--EKETAE 1834
              P +    +      AA  A+  L   E+ETAE
Sbjct: 1506 TEPFRGRTSQNEVRFAAAEGAIRKLHVIEQETAE 1539


>gi|388495198|gb|AFK35665.1| unknown [Medicago truncatula]
          Length = 344

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/337 (36%), Positives = 188/337 (55%), Gaps = 13/337 (3%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  +   F+++ LL EA+TH+S P S    Y+RLEF+GDAVL H I+ HLF  YTN+ 
Sbjct: 11   AVEKIIGYTFRNKNLLEEALTHSSYPES--VSYERLEFIGDAVLGHAISNHLFLVYTNVD 68

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
              +L+ LR+A V+ E  AR AV + LH ++R  + +L   IR+F   V +E  +     +
Sbjct: 69   QRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGR-AIVLY 127

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KA KVL D+VES+A A+++D   D   +W V + LL+P+VT   L     PV  L
Sbjct: 128  G-GAVKASKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTML 186

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E C +  + ++ + SR+G+ +T  VY+DG    VA + QK +A+  AA++A+  L   E
Sbjct: 187  YEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKL---E 243

Query: 1832 TAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYA 1889
                      +  K  +GT      +Q L  +C R+ WP P+Y   R+ G    K F  +
Sbjct: 244  RVLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVYSIERDEGTPQNKIFVTS 303

Query: 1890 VRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELL 1926
            V+V T D   T + +GE    VK +++SAA L++  L
Sbjct: 304  VQVATPD--GTLKMLGEEKSRVKDSQNSAASLMIRAL 338



 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EALT +S  E+  YER E +GDA L   +S  LFL Y    + QL+ +R   VS   L +
Sbjct: 28   EALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEKLAR 87

Query: 1449 YALSKGLQSYIQ 1460
             A+S  L  YI+
Sbjct: 88   AAVSNCLHRYIR 99


>gi|320035561|gb|EFW17502.1| RNA helicase/RNAse III [Coccidioides posadasii str. Silveira]
          Length = 1448

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 184/731 (25%), Positives = 333/731 (45%), Gaps = 97/731 (13%)

Query: 290 GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
           G     +  +P  +AR YQL++L ++ ++N I  ++TG+GKT IA+L I+    +L+R  
Sbjct: 33  GTSKSQEAPLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ---RELERCP 89

Query: 350 KKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLV 407
                 F+ P V LV QQ   I +Q   +      G    + W  ++ W       ++++
Sbjct: 90  AHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVNHWSTKKIWDDILLNIRIVI 149

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----RPSV 463
            T Q+LL+ L +  + +  I+LL+ DE HH V+  P + +M +FYH   +E+     P +
Sbjct: 150 STPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLPHI 209

Query: 464 FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDK 522
            G+TASP      + Q D  +    LE  L++V  T K  R+E+ + + MP    +EY  
Sbjct: 210 LGLTASPTTR---ARQTDLEV----LEINLNAVCVTPKMHREEMMQFIHMPEYCSIEYQP 262

Query: 523 AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGAR-DAGAKEELRQVYGVSERTESDG 581
               +S    ++++ V + E    +    K  FM  R D  +++ L   +   +    D 
Sbjct: 263 DVQNFS--SIVEKLSVIINELDIENDPFVK--FMRRRNDLKSRQRLLDAFENKKTPCLDQ 318

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
               +++ R I+    ELG W +                          E +L++ +  L
Sbjct: 319 LKRCLRRSRVIHR---ELGPWAS--------------------------ERFLTRCIMGL 349

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
           + +    A   + A     +N ++            + S VVS  E     +G      +
Sbjct: 350 KSKQT-NASGPQWADWDREDNSYMLN----------VLSQVVSSTE-----MGVQNPPDE 393

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ KV  LI  L+  +H      I+F E     ++L ++ +  P    +K+ + +G + S
Sbjct: 394 LSRKVHKLIDFLV-LEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTTAFLGSSAS 452

Query: 762 QEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
              ++              I   R G+  L++AT+V EEG+D+  C++VI FDL K + +
Sbjct: 453 VSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRS 512

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRL 872
           +IQ RGRARK GS + L +   + + ++ L      E+T+++  +E +  L H++    L
Sbjct: 513 FIQRRGRARKKGSKFALFLHSEDRATSSELHLM---EKTMKQLYLENKRTLEHIQ---YL 566

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +V+      ++V STGA ++L++A   +  +C  L S  +    PEF++E  +  G   
Sbjct: 567 ENVEEEGYDGFRVASTGAFLTLSNARNHLSHFCGTL-SAEFIATDPEFVLEGDDTTG--- 622

Query: 933 EYSCKLQLP--CNAPFEKLEGPVC-SSMRLAQQAVCLAACKKLHEMGAFTDMLLP----- 984
            +S K+ LP   +    +  G +   + ++A++     A   L+E G   D L+P     
Sbjct: 623 -FSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMPAHHHI 681

Query: 985 -DKGSGEQQEK 994
            D+   EQ EK
Sbjct: 682 DDEDGLEQVEK 692



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 190/456 (41%), Gaps = 98/456 (21%)

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---IL 1388
            T   F P   C +  LP    + A  +P ++  +E+  +A +L   I +PV  S    +L
Sbjct: 917  TAKCFYPANNCSVDRLPVEYSQFALFIPCLIHSIENYFIANELAQTILHPVGFSNLSLVL 976

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
             A+++++ +E   Y+R E LGD+ LK   S  L   +P   EG+LT  +  +VSN  L  
Sbjct: 977  TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNVVSNGYLAN 1036

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL  +I    F  ++W                                       
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWRP------------------------------------- 1059

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
             Y  D +  G +   +   R +S+K LADVVEALIG   ++GG++   + +K     ++ 
Sbjct: 1060 SYNTDHINTGNM---TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKW 1116

Query: 1569 DPEEVGCPSRPACVPESVLRSVD----------FHALEDALKIKFKDRGLLVEAITHASR 1618
             P          CV  ++L                 +E  +   FK + LL+ A+TH S 
Sbjct: 1117 SPLN-------ECV--NILHHQQDSFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSS 1167

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA------- 1671
              SG S YQRLEFVGD++LD ++ + LF S        +  +R A VN +  A       
Sbjct: 1168 KGSGHS-YQRLEFVGDSILDIIVVQELFESPRGFHHFDMHLMRTALVNADFLAFLCMNAY 1226

Query: 1672 --------------RVAV-----KHKLHVHLRHGSS-----ALDRQIRDFVK--EVLEEL 1705
                          RV V     +  L   ++H +S     A  R  + + K  E ++E 
Sbjct: 1227 REEDRGEAVENSKTRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQYEKLHEEIDEK 1286

Query: 1706 LKPGFNSFGLGDCK--APKVLGDIVESIAGAIFLDS 1739
            L+          C+  A K   DIVESI GAIF+DS
Sbjct: 1287 LRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322



 Score = 50.8 bits (120), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 23/150 (15%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            + F +  L++ AI+  S  +   S YQRLEF+GD++L    +  L   +   P GRLT  
Sbjct: 967  VGFSNLSLVLTAIS--SSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMR 1024

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--FGLGDC 1718
            +   V+N   A  A++           + LD+ I    K       +P +N+     G+ 
Sbjct: 1025 KGNVVSNGYLANAALQ-----------TGLDKFI--LTKPFTGAKWRPSYNTDHINTGNM 1071

Query: 1719 KAP------KVLGDIVESIAGAIFLDSGRD 1742
              P      KVL D+VE++ GA  +D G +
Sbjct: 1072 TEPTREMSTKVLADVVEALIGAANIDGGEN 1101


>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
          Length = 1377

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 165/643 (25%), Positives = 292/643 (45%), Gaps = 95/643 (14%)

Query: 299 MPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           +P E++R YQL++ E +  +NTI  ++TG+GKT IAV+ I++   +L+R   +    FL 
Sbjct: 26  IPPEKSRLYQLEMFEASMARNTIVVMDTGSGKTHIAVMRIQA---ELERCPPQKRVWFLA 82

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNI 416
           P V L  QQ   +R    YV      G    D W  QR W    +  +++V T  +L + 
Sbjct: 83  PTVTLCEQQYTTLRTNIPYVQTRLLVGSDNVDRWSEQRIWDAVLENVRIVVSTHGVLSDA 142

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VFGMTASPVN 472
           L H  +++E + LL+ DE HH   +HP + +M  +YH     K P+    + G+TASPV 
Sbjct: 143 LSHGFVRIEELTLLVFDEAHHCAGEHPANKIMKNYYHPLLALKGPNAVPHILGLTASPV- 201

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHE 531
           ++   S ++       +E  L+++  T +  R EL ++V  P+ V + Y    S++  + 
Sbjct: 202 IRSKPSDLEI------IERNLNALCRTPRVHRGELLEYVHPPTFVRLAYLSNPSIYGQYT 255

Query: 532 QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
               + + +  A  ++S  S+          +  +LR++     ++              
Sbjct: 256 SPALVNLTIVYANATNSSASQ---------DSDIDLRELKSFCRKSR------------- 293

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             +   ELGQW A                          + Y+   V     ++   A +
Sbjct: 294 --HIYDELGQWAA--------------------------DYYIKTSV-----DIWSAAET 320

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
           K++       + F + G       +LL   V S    +D    +   +   T KV+ L++
Sbjct: 321 KRNG------DPFFDNGKRSNALLKLLRHQVQSASSALD---SSHPDEMNTTRKVRQLVR 371

Query: 712 ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQE------- 763
            L  Y +  D   IIFVE+     VL ++ +  P +   ++  + IG ++          
Sbjct: 372 FLTSYGNG-DLHGIIFVEQRATVAVLHQLLSLHPMTKGMLRCGTFIGTSSFSSRKSSLGD 430

Query: 764 -MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            +   +  +T+  FR      ++ATSV EEG+DI  CN+VI F+    + ++IQ RGRAR
Sbjct: 431 WLTPLEQMDTLDCFRKKDKNFIIATSVLEEGIDISACNIVICFNKPPNLKSFIQRRGRAR 490

Query: 823 KPGSDYILMIERGN--LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG 880
           K  S ++L++   +  L    +        E  +K+A +R  L  L+D      V+    
Sbjct: 491 KSRSIFVLLVSSDDRSLGPQEWGDMENQIREEYQKDASKRQKLQQLEDAEE--HVEGRSN 548

Query: 881 TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME 923
             ++++STGA+++L +AV  IH +C+ LP   Y  L+P+F  +
Sbjct: 549 ARFEIKSTGALLTLETAVAHIHHFCATLPPQPYVDLQPKFYFQ 591



 Score =  140 bits (353), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 231/561 (41%), Gaps = 95/561 (16%)

Query: 1318 SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDK 1377
            + + E E E    +   +FLP E   +  LP   V  +  +PSIM R+    +A+ L + 
Sbjct: 860  ASKSETENEVDCSEKPALFLPLESSTVDKLPMEYVECSLLIPSIMHRLWRQAVALDLYNA 919

Query: 1378 I---NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            +      +    ++ A  A S  E   Y+R E +GD+ LK++V   L+   P   EG L+
Sbjct: 920  VFEDQGFLNLDYVITATNAPSANENSNYQRLEFIGDSVLKYLVCVNLYASQPSWPEGYLS 979

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEK 1494
            R + Q V+N  L + AL+ GL  YI    F   +W+ P     + +D  D  SS    EK
Sbjct: 980  RAKDQAVANSHLSRAALAVGLDRYIVTKTFTARKWSPP-----YIQDILDAASS---PEK 1031

Query: 1495 SVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDA 1554
                                             R LS+K LADVVEALIG  +++ G +A
Sbjct: 1032 ---------------------------------RTLSTKVLADVVEALIGGAFLDRGYEA 1058

Query: 1555 A----NHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLV 1610
            A    +  +  + I    D    G  +     P S L +     +E  +  +FK+RG L+
Sbjct: 1059 AATCISRFLPEMRITAPLDIFARGIHTESVFAPTS-LANGHLADVERLIGYQFKNRGYLL 1117

Query: 1611 EAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            EAITH S    S  S YQRLEF+GDA LD ++   +  +   L  GR+   + A VN   
Sbjct: 1118 EAITHPSCEHDSHTSSYQRLEFIGDATLDMIVVSFMIDNAPELSHGRMHLTKTAVVNAGF 1177

Query: 1670 FARVAVKHKLH-------------------------VHLRHGSSALDRQIRDFVKEVLEE 1704
             A + +   L                          VHL         +I   +   LE 
Sbjct: 1178 LAYLCMDASLEQVVTDVALSPNHYSTGFTEVHSSKLVHLCQLMRHQHPEINTAMSSCLER 1237

Query: 1705 L--LKPGFNS---------FGLGDCKAP-KVLGDIVESIAGAIFLDSGRDTSVVWQVFQP 1752
               L+P   S         + L    AP K L DIVESI GA+ +D+  D S   +V + 
Sbjct: 1238 YHKLQPAIASAIAHGNEYPWVLLTSLAPAKFLSDIVESIIGAVLIDAAGDLSACKKVAEN 1297

Query: 1753 L-----LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ-VGV 1806
            L     L  ++  +    HP  +L E        +EYK  + G   T  V + G   V V
Sbjct: 1298 LGLIAYLRRILDEDVNIPHPKNKLGE--MSSGRTVEYKLGKEGQEYTCTVEVGGTAIVSV 1355

Query: 1807 AQNPQKKMAQKLAARNALAVL 1827
            +Q   ++     AA  A+ +L
Sbjct: 1356 SQGISQEEVMTKAAYMAVELL 1376


>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
          Length = 1597

 Score =  189 bits (481), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 230/479 (48%), Gaps = 65/479 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK-HEGQLTRMRQQ 1439
            P P  ++L ALT +     +  ER E++GD++LK   S  ++   P   HEG++T +R  
Sbjct: 1150 PSPG-EVLRALTTSVANAGYDLERLEVIGDSFLKLAASIRVYCDSPSHFHEGKMTHLRML 1208

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAE 1498
             V N  L++    K +  ++ A +F A   W  P   P                      
Sbjct: 1209 QVCNRNLFKLGKIKSIPRFVVATKFVAKENWLPPCYFPN--------------------- 1247

Query: 1499 DKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL 1558
                TD +  E E D+  + +L      ++ +S K++AD VEAL G+Y    G   A  +
Sbjct: 1248 ---NTDDDCMELETDEKPNAKL------WQRISKKSVADSVEALFGLYLTLHGIKGALKV 1298

Query: 1559 MKWIGIQVESDPEEVG----------CPSRPACVPESVLRSV------DFHALEDALKIK 1602
            M+W+G+ V     +             P  P  +     + +       F  LE +L  +
Sbjct: 1299 MRWMGVNVPDSSGDEDSSSSSSSFGGTPPEPLLLDSPQAKHLLDDHLAGFETLERSLNFR 1358

Query: 1603 FKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLF-FSYTNLPPGRLTDL 1660
            F +R  L++A +HAS   +   SCYQRLEF+GDAV D+LITK+L+      L PG L+D+
Sbjct: 1359 FGNRFYLLQAFSHASYHHNRMTSCYQRLEFLGDAVFDYLITKYLYDCRLFQLTPGALSDM 1418

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK--EVLEELLKPGFNSFGLGD- 1717
            R+A VNN  FA +AV++  H +L+H    + + I  FV+  E+ +      F   G  D 
Sbjct: 1419 RSALVNNVTFAVLAVRNGFHRYLKHLVPDVHQAIDRFVQQQEMCDHATPDEFFLIGTHDD 1478

Query: 1718 -----CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRE 1770
                  + PKVLGDI ES+ GA+FLDS      VW+VF PL+   +   T  +P  P+R 
Sbjct: 1479 PMAEAVEVPKVLGDIFESLVGAVFLDSDMSLDAVWRVFYPLIRQEIEACTRVVPKSPIRT 1538

Query: 1771 LQERCQQQAEGLEYKASRSGNLA-TVEVYIDG-VQVGVAQNPQKKMAQKLAARNALAVL 1827
            + E+   + +    +    G +   VEV  +G +  GV +N   ++A+  AA+ AL+ L
Sbjct: 1539 IYEKYPGKVQFKTLENLPDGRICIAVEVLNNGRLYKGVGKN--SRIAKNTAAKYALSQL 1595



 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 131/237 (55%), Gaps = 19/237 (8%)

Query: 300 PEEQARP--YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC---NDLQRQNK--KM 352
           P+E + P  YQL++ E A+++NTI +L TG+GKT+IAVLLIR      N    Q K  + 
Sbjct: 7   PKENSIPRNYQLELYEHARRENTIVYLPTGSGKTMIAVLLIRDYAAQVNKFAAQIKCFRP 66

Query: 353 LA------VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVL 406
           LA      VFLVP V L  QQA  IR  T   VG Y GE+G D W   RW +E +   VL
Sbjct: 67  LAQDGQRVVFLVPTVILAKQQAAYIRRHTCLEVGEYYGELGVDLWKGDRWAKELEKNNVL 126

Query: 407 VMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYS---LVMSEFYHTTSKEKRPSV 463
           VMTAQ+ +N + H  I +  + LL++DECH AVK  P     +V++EF         P V
Sbjct: 127 VMTAQLFVNAVNHGFISVGQMALLVIDECHRAVKDSPMKHSLIVLNEFCQRHGAGSVPRV 186

Query: 464 FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
            G+TA+ + L+    + D    I  L++ ++S++ T    K +  +   P E++ EY
Sbjct: 187 LGLTAA-LFLEKCKPK-DVTKNISKLKTSMNSIIRTAHPHK-IAGYSTKPIEIICEY 240



 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 188/402 (46%), Gaps = 69/402 (17%)

Query: 703  TPKVQSLIKILLKY---------QHTEDFRAIIFVERVVAALVLPKVFAEL----PSLSF 749
            TP V  L+ IL ++         + T    +I+FVER  +A VL  +  E     P LS+
Sbjct: 364  TPHVTRLMDILRQFSPGEIDTTAKFTPLLCSIVFVERRSSANVLYHILREASQCDPGLSY 423

Query: 750  VKSASLIGH---NNSQEMR-----TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
            +     +G    N   +M+          + I +FRDG   LLVATSV EEG+D+R CN+
Sbjct: 424  LNPLFTMGQASGNPKGKMKENHHLNQSQSKIIRQFRDGTCNLLVATSVLEEGVDVRACNL 483

Query: 802  VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT-------FLRNARNSEETLR 854
            VIRFD  KT   Y+QS+GRAR P + YILM+    LS          F+  +     ++ 
Sbjct: 484  VIRFDGIKTFCDYVQSKGRARSPNAFYILMVPTEKLSPFLDTLAGFHFIEQSLMDPSSVM 543

Query: 855  KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
              ++   + S      +L      P   Y     G  V+L S++ L+++YC+ LPSD  +
Sbjct: 544  MSSVTDDEPSD-PQLEQLWQKIIPPYCPY---PDGPRVTLLSSISLLNWYCATLPSDGSA 599

Query: 915  ILRPEFIMER---------------HEKPGGPT---EYSCKLQLPCNAPF-EKLEGPVCS 955
             L P +++ R               H +  G T    + C L LP N P  ++L G V  
Sbjct: 600  PLAPYYVVNRISAGSLAEMDRDHTNHLRRLGSTIQNPFRCTLLLPLNCPLRDELIGRVMP 659

Query: 956  SMRLAQQAVCLAACKKLHEMGAFTDM-LLPDKGS---GEQQEKVDQNDEGEPLPGTARHR 1011
            S RLA+Q V L AC +LH++G   D  L+P   S    ++   VD + + E   G+    
Sbjct: 660  SKRLAKQEVSLQACIRLHQLGELDDQHLMPLSKSVVETDENADVDFDCQFEHSQGS---- 715

Query: 1012 EFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNG 1053
            +FY  GVA +L         DG   S  F+L++ T + V + 
Sbjct: 716  DFYLRGVARLL---------DGVIASP-FYLYLLTYEVVKDS 747



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 15/148 (10%)

Query: 1239 IVTAAHSGKR-----FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIF 1293
            +VTA H   +     +YV ++R E+T  S FP          Y++YA+Y++ ++   +  
Sbjct: 884  VVTAHHDQTKGKSSCYYVNAVRPEVTPLSRFPNPA-------YATYANYFRDRHNAIIAN 936

Query: 1294 KKQPLIRGRGVSY-CKNLLSPRFEHSEE--QEGEGEEILDKTYYVFLPPELCFIHPLPGS 1350
              QPL+  R  S+   N L+P++ + +E   EG+GE        ++  PE C +H  P S
Sbjct: 937  LSQPLLEVRKESFKTFNFLTPKYVNRKEAADEGDGEIQSLPKGSIYFVPEFCEVHRFPAS 996

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            + R A  +PSI  R+ S+LLA +L+ +I
Sbjct: 997  MWRQAVWIPSIFYRLNSLLLADELRMEI 1024


>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 180/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y G+ G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQXVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAXMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNXFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
 gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
          Length = 1730

 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 180/735 (24%), Positives = 314/735 (42%), Gaps = 126/735 (17%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPK 360
           + R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   
Sbjct: 11  KPRSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNT 70

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQ   ++  T   VG Y G+ G D W   +W  E    QVLV TAQ+ L++   S
Sbjct: 71  VELARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQS 130

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V
Sbjct: 131 HMTLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVV 190

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL-------- 529
               K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +        
Sbjct: 191 K---KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQI 247

Query: 530 ---HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
                 L  M++ V+   +S S + +      RD   K  ++Q++               
Sbjct: 248 QQFFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN-------------- 287

Query: 587 QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
                  + L E G + A     S +       R    L +K     L    ++  CE +
Sbjct: 288 ----DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKI 338

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
              + +K   + D ++   +    E                  +VI+  +      TPKV
Sbjct: 339 RHLLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKV 374

Query: 707 QSLIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIG 757
           Q  ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G
Sbjct: 375 QRFLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVG 433

Query: 758 HNN-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
            N+ SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT 
Sbjct: 434 RNSISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTF 492

Query: 812 LAYIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD---- 862
             Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+    
Sbjct: 493 NMYVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMY 552

Query: 863 --LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF 920
               H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +
Sbjct: 553 EVKQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-W 600

Query: 921 IMERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAAC 969
           I    E         C        +QLP N+   KL+  + S    S++ A+ +    AC
Sbjct: 601 ISSLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKAC 657

Query: 970 KKLHEMGAFTDMLLP 984
           K L+++G   +  LP
Sbjct: 658 KLLYQLGELNERFLP 672



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1196 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1255

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1256 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1314

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1315 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1372

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1373 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1432

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1433 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1492

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1493 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1552

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1553 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMST 1612

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1613 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1670



 Score = 44.3 bits (103), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 883  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 936

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 937  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 989

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 990  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1021


>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 180/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y G+ G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCADKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  157 bits (397), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAP------GVLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEEL-----------------LKPGFNS--------------FGLG- 1716
                     V+ +LEE                  LK    S              F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTELKNALKSISHEEEKNDPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  189 bits (480), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 180/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y G+ G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  157 bits (396), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 219/479 (45%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAP------GVLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV---- 1698
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  FV    
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1699 -----------------------------------KEVL------EELLKPGFNSFGLG- 1716
                                               K  L      EE  +P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNEPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
          Length = 1451

 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 197/713 (27%), Positives = 316/713 (44%), Gaps = 92/713 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LEQ+ K+N I  ++TG+GKT +AV+ I+   ++L       +  FL   V L 
Sbjct: 79  RGYQREMLEQSIKRNVIVAMDTGSGKTQVAVMRIQ---HELDTCAPDKIVWFLGKTVSLC 135

Query: 365 YQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            QQ  V++ Q   V +    G++  D W    W R  +  +++V T  IL + L H+ +K
Sbjct: 136 EQQYSVVQRQMPSVSMKLLTGQLNIDAWSEDVWPRILNGTRIIVSTFDILRDALDHAFVK 195

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFY--HTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           M  ++L++ DE H+ VK      +M  FY  H  +    P++ G+TASP+  K    +  
Sbjct: 196 MNMLSLIVFDEVHNCVKNSSGRKIMVNFYHEHKNAGMPVPAILGLTASPIQSKSNHDE-- 253

Query: 482 CAIKICNLESKLDSVVCT-IKDRKELEKHVPMP--SEVVVEYDKAASLWSLHEQLKQMEV 538
               I  LE  +DSV  T   +RKEL +HV  P  S V+ + ++  +   L + L Q E 
Sbjct: 254 ----ILELEVTMDSVCITPTINRKELLQHVNKPNLSRVLYDVEEHPTRTPLMQTL-QSEY 308

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQV--YGVSERTESDGAANLIQKLRAINYAL 596
           +  +  Q  S     Q +   +    E L  +  +G   + +     N  + +      L
Sbjct: 309 SAMDITQDPSIIKTKQLIAKGEKTGPEILSLLMKHGTFSQKQLKSLWNKSKDI------L 362

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAK 656
            ELG W A K    +++ L +     +   + F ES+ ++  + L   L + A S    K
Sbjct: 363 DELGPWAADK----YISELVSLFLKRFDSPMTFNESWSNEDRTYLAGHLRQIAASPHQPK 418

Query: 657 VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
           + D  N                                  +AD     K   LI+ LL  
Sbjct: 419 LPDRHN----------------------------------LAD-----KTNKLIQELLAA 439

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSAS-LIGHNNSQEMRTFQ 768
              ED   IIFV    AA VL  +  E P +       S V SA+  I   N  E     
Sbjct: 440 D--EDVVGIIFVRSRAAANVLCAILREHPEIRQRYRVGSVVGSAANKIRKQNIYEYLPGA 497

Query: 769 MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
             +T+  F+ G + LLV+TSV EEG+D+  CN+VI FD   T+ ++IQ RGRARK  S  
Sbjct: 498 TADTLRDFKTGAINLLVSTSVLEEGIDVAVCNLVICFDETTTLKSHIQRRGRARKQKSKM 557

Query: 829 ILMIERGNLSHA--TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
           I++    + +    +  R+ ++  E       ER +L  L+  +R    +A     Y V+
Sbjct: 558 IVLARSTSDAREWDSLERDMKSRYEQ------EREELDTLEIEAR---TEATSHFAYTVK 608

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP- 945
            +GA + L ++   +  +C+++    Y   RP +I  + E    P  +S  + LP   P 
Sbjct: 609 KSGARLDLENSRQHLEHFCNKVFHRDYVDQRPVYIFHKTELGSAPPTFSATVTLPSGLPK 668

Query: 946 -FEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGEQQEKV 995
              + +G     S + A +     A   LH+ G  +D LLP +  S E +E+V
Sbjct: 669 HLRRCQGRGGWRSEKNAMKEAAFHAFVILHQEGLVSDHLLPLNADSKEAEEEV 721



 Score =  129 bits (325), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 207/499 (41%), Gaps = 87/499 (17%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---I 1387
            K Y   LP     +  +P    +    +PSI+  +E  L+A +L   +  PV  +    +
Sbjct: 929  KPYRWVLPISRATVDEVPRRAAKCGMLIPSIIHELEVQLIANELSSTLLAPVGITDLQLV 988

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            +EA+++ S  E   YER E LGD+ LK+      + ++P   EG L   + ++VSN  L 
Sbjct: 989  IEAISSRSAAEPVDYERIEFLGDSVLKYCTVIQAYSEHPFWPEGLLNHFKDRLVSNTRLT 1048

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            +  L  GL  +I +  F   +W      P+                              
Sbjct: 1049 RMCLETGLSKFIFSKTFTGIKWR-----PL------------------------------ 1073

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-WIGIQV 1566
              Y D+ ++   ++G S   R +  KTLADVVEAL+G  Y +GG   A   +K ++G + 
Sbjct: 1074 --YRDEFLDKKPVDGVS---RFIGPKTLADVVEALVGASYQDGGISKALECIKIFLGTKC 1128

Query: 1567 ESDPEEVG-CPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS- 1624
                ++V  C    A   +  L       LE+ +   F+ + LL+EA+TH S  + G   
Sbjct: 1129 NWHDDKVARCILFRAATSDVPLPPT-MEPLEELIGYTFEKKSLLIEAMTHGSYAADGQQR 1187

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH---- 1680
             Y++LEF+GDAVLD+++   +F S   +P GRL  ++ A  N +  A   ++H L     
Sbjct: 1188 SYEQLEFLGDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMANADFLAFTNMQHGLRRPEV 1247

Query: 1681 ------------------VHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG-------- 1714
                                +RH S  + R + +   +   E L+   N           
Sbjct: 1248 AINDDGEPVSTEVSLPIWKFMRHSSPEMGRIMNE--TQARFESLQGEINEARTNGKHYPW 1305

Query: 1715 --LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHP 1767
              L      K   DI E+  GAI++DSG D  V           P LD +++      HP
Sbjct: 1306 TLLARLHPKKFYSDIFEATLGAIWVDSG-DIEVCTAFLHKFGVLPYLDRILSENIHVQHP 1364

Query: 1768 VRELQERCQQQAEGLEYKA 1786
              EL +    Q    +Y A
Sbjct: 1365 KEELAKLAIDQKMTYDYTA 1383


>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 180/733 (24%), Positives = 313/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y G+ G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGDQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIAEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAP------GVLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEQKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|389635425|ref|XP_003715365.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
 gi|374095503|sp|A4RHU9.3|DCL2_MAGO7 RecName: Full=Dicer-like protein 2; Includes: RecName:
            Full=Endoribonuclease DCL2; Includes: RecName:
            Full=ATP-dependent helicase DCL2
 gi|351647698|gb|EHA55558.1| dicer-like protein 2 [Magnaporthe oryzae 70-15]
 gi|440467937|gb|ELQ37130.1| hypothetical protein OOU_Y34scaffold00618g20 [Magnaporthe oryzae Y34]
 gi|440483523|gb|ELQ63906.1| hypothetical protein OOW_P131scaffold00922g30 [Magnaporthe oryzae
            P131]
          Length = 1485

 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 204/734 (27%), Positives = 324/734 (44%), Gaps = 113/734 (15%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL++ + + ++N I  ++TG+GKT +AVL IR+   +L+R   +    FL P V L
Sbjct: 65   ARAYQLEMFQASMQQNIIVSMDTGSGKTQVAVLRIRA---ELERTPPEKRVWFLAPTVAL 121

Query: 364  VYQQAEVIREQTGYVVGH-YCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
              QQ EVIR Q          G+   D W D Q W       +V+V T  IL   L H+ 
Sbjct: 122  CAQQYEVIRSQIKVANSIVMTGDDNVDSWSDVQTWDAVLANVRVVVCTYMILFEALSHAF 181

Query: 422  IKMEAINLLILDECHHAVKKHPYSLVMSEFY--HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            + M++I+LL++DE H+   K P  L+M  FY    ++ +  P + G+TASPV    +SS 
Sbjct: 182  VTMDSISLLVMDEAHNCTGKFPGRLIMKRFYMPRKSAGDHVPHILGLTASPVMKSDLSSM 241

Query: 480  VDCAIKICNLESKLDSVVC--TIKDRKELEKHVPMPSEVVVEYDK---------AASLWS 528
             D       LES LDS VC      R+EL  +V  P+  V  Y +           ++ +
Sbjct: 242  ED-------LESSLDS-VCRGPTLQREELFANVHQPTMTVTTYKECDLRSPVQYTRNMNN 293

Query: 529  LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
            LH   + +++A +              MG R   +  EL ++    +    +    L +K
Sbjct: 294  LHLAFENLDIAEDPYVL--------HLMGQRTPKSLRELDRILTKLDTYTQNQMKALQRK 345

Query: 589  LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
              ++     ELGQW                            +SY+  VV          
Sbjct: 346  SSSL---FRELGQWAV--------------------------DSYIYNVVE--------- 367

Query: 649  AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
             VS  DA+     + ++ GG  + E+  L   H    G +   +  A  A    + K+Q 
Sbjct: 368  KVSNLDAR-----SSWL-GGWLDDEQRYL---HRAIQGINALPVSAAIPAPEMTSIKLQV 418

Query: 709  LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN--SQEMR 765
            L++IL  Y+ +     I+FV+    A +L ++ A +P ++   K   ++G +   S++M 
Sbjct: 419  LLRILRGYEGSP--VGIVFVKERATAGILSQLLAIIPDINARYKVGCMVGTSRYMSRKMN 476

Query: 766  TFQMQE------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
              ++ +       + KFR G + LLVATSV EEG+D+  CN+VI FD+   + ++IQ RG
Sbjct: 477  IHEVLQQGDDLLALEKFRSGAINLLVATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRG 536

Query: 820  RARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER--TDLSHLKDTSRLISVDA 877
            RAR   S   LMIE  +L           + E   K+  E    +L HL        +D 
Sbjct: 537  RARMRESKLHLMIEEDSLVSV----KDWGALEAAMKQRYENDMRELDHLAQVEEEDEMDV 592

Query: 878  VPGTVYQVESTGAVVSLNSAVGLIHFYCSQLP-SDRYSILRPEFIMERHEKP---GGPTE 933
             P       +T A V+++ A G +  +C  +  S +Y    PE+++         G P  
Sbjct: 593  PP---LHSRTTAAKVTVDDAKGHLEHFCRVVTRSQQYVDASPEYLVTTKTTAFVGGKPIP 649

Query: 934  -YSCKLQLPCNAPFEKLEGPVCS---SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG 989
                 + LP + P    +        S R A++   L A K L+E G   + LLP + S 
Sbjct: 650  ILGVTVLLPASLPPNLRQAHSSRDWISERNAKKDAALQAYKMLYEAGLINEHLLPIRES- 708

Query: 990  EQQEKVDQNDEGEP 1003
               + VD+  +G P
Sbjct: 709  ---DFVDREVDGRP 719



 Score =  108 bits (269), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 186/467 (39%), Gaps = 123/467 (26%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK----ILEAL 1391
             +P +LC    +P +LV+    +PSI + +E   +A +L  +        K    ++  +
Sbjct: 953  IIPEQLCTFDTVPATLVQLGMLVPSITQAMEPYFVAQELLRRTALGSLDFKDIDLVMMVI 1012

Query: 1392 TAASCQETFCYERAELLGDAYLKW---VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            T++S      YER E LGDA LK    V      L +P   EG L+ ++ ++VSN  L +
Sbjct: 1013 TSSSAGRLTNYERVEFLGDAVLKLGAAVTCATNNLHFP---EGYLSLLKDRLVSNSRLCK 1069

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             A + GL  +I   +++  +W      P    +T                          
Sbjct: 1070 AATALGLDQFIITRQYSLKQWRNMLTAPEPPTNT-------------------------- 1103

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
                               R +SSKTLADV EALIG  Y+EGG   A   ++ I + + +
Sbjct: 1104 -------------------RKMSSKTLADVTEALIGAAYIEGGMSKA---LRCISLMIPN 1141

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHA----LEDALKIKFKDRGLLVEAITHASR--PSSG 1622
            +       SR A + +  L  +   +    LE+ L   F  + LL+EAITHAS   P S 
Sbjct: 1142 ERWRSLDESR-AVLYQVALNDIPLPSTLGPLEELLGYSFNKKSLLIEAITHASYNIPGSA 1200

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR--LTDLRAAAVNNENFARVAVKHKL- 1679
             S  +RLEF+GD+VLD ++   LF      P     +  LR A VN E    +A++ +  
Sbjct: 1201 GSSLERLEFLGDSVLDFVVVARLFSVKDPAPIEHYNMHLLRTAVVNGEFLGFLAMEWRTA 1260

Query: 1680 ----HVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG--------------------- 1714
                 V +R G    D          LE +  PG   FG                     
Sbjct: 1261 ATQRSVVVRTGQGTADE---------LETVETPGLPLFGFLRHNASGDWVRDQQLAEERH 1311

Query: 1715 ---------------------LGDCKAPKVLGDIVESIAGAIFLDSG 1740
                                 L   +  KV  D++E++ GA+++DSG
Sbjct: 1312 AEMAPGIRDALEHGQRYPWDLLARLRISKVHSDVLEAVIGAVWVDSG 1358


>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
          Length = 1719

 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 180/733 (24%), Positives = 312/733 (42%), Gaps = 126/733 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y G  G D W   +W  E    QVLV TAQ+ L++   S +
Sbjct: 62  LARQQMVAVQRHTNLTVGFYVGXQGVDEWTRGQWSDEIQDHQVLVGTAQVFLDLFTQSHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F      +  P V G++   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNKALPRVVGLSGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSL---------- 529
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ +          
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFLVTQSIQSQIQQ 238

Query: 530 -HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFATLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSIKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDIXCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEM-----RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           + SQ+      R +Q +  I +FR+G   L++ +SV EEG+D++ CN V+  D  KT   
Sbjct: 425 SISQDFESVLDRKYQ-KSAIQQFREGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNM 483

Query: 814 YIQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------ 862
           Y+Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+      
Sbjct: 484 YVQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKDRVLERTEPEMYEV 543

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I 
Sbjct: 544 KQHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WIS 591

Query: 923 ERHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKK 971
              E         C        +QLP N+   KL+  + S    S++ A+ +    ACK 
Sbjct: 592 SLQEDQRKILFGDCARSKEVVSIQLPLNS---KLKNTIYSDPMDSVKAAKVSAAFKACKL 648

Query: 972 LHEMGAFTDMLLP 984
           L+++G   +  LP
Sbjct: 649 LYQLGELNERFLP 661



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 221/479 (46%), Gaps = 90/479 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + +  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQGEFLAAITSSSTADVYDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDG------- 1485
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E+ +         
Sbjct: 1245 VSNRNLL-YCLSDTDIPKRISTILFTPRYTWLPPSISLPHNVLALWRENPELAVMVGPHN 1303

Query: 1486 --DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSK 1533
              D +L ++E  V+     +D NYN + +    + +     + +            +  K
Sbjct: 1304 LRDLALGEEESMVSGH--CSDINYNNFVEGCRANAQSHHAGADFSAEVNFCVGLVTIPDK 1361

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPES 1585
             +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  +
Sbjct: 1362 VIADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTT 1421

Query: 1586 VLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLIT 1642
             +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+
Sbjct: 1422 EIDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLIS 1481

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF----- 1697
             ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F     
Sbjct: 1482 AYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQE 1541

Query: 1698 ---------VKEVLEE---------------------LLK----------PGFNSFGLG- 1716
                     V+ +LEE                      LK          P    F +  
Sbjct: 1542 SQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMST 1601

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            +   PK LGD++E++  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1602 NVDVPKALGDVLEALIAAIYLDC-RDLQRTWEVIFNLFKPELEEFTRNVPINAIRQLTE 1659



 Score = 44.3 bits (103), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEXKRMLVTKVHRELTPLSLMEQNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R        L+ +     +  G+          + L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRE-------LTDQLNFYVQNRGKSSAKSKARAKIILIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEALRKRFN 1010


>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
 gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
          Length = 1720

 Score =  189 bits (479), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 182/719 (25%), Positives = 313/719 (43%), Gaps = 91/719 (12%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           E Q R YQ  +++   ++N I +L TGAGKT +A+L ++    D  +  ++    A+F+ 
Sbjct: 7   EMQVRSYQSRLVDYLTERNGIVYLPTGAGKTFVAILTLKRFSLDFDKTIEDGGKRAIFMC 66

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V L  QQA   R  T + VG Y G+ G D W   +W  E   KQVLV TAQ++L+++ 
Sbjct: 67  NTVELARQQALACRSLTNFKVGFYVGDQGVDEWSRSKWDVEIREKQVLVGTAQVMLDLML 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
           H+ + + +++++I+DECHH   +HP+   M  F H     + P V G+T   V +KG  +
Sbjct: 127 HAHLSLGSVSIVIIDECHHGTGRHPFREFMRLFLHVRPNVQLPRVVGLTG--VLIKG--N 182

Query: 479 QVDCAIKIC-NLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHEQLK 534
           +++   K+  NLE+     + T+ D KE+E    +   P E  + Y      + L + +K
Sbjct: 183 EINNVKKMLKNLETTYHGNIITVSDMKEMENVMLYSTKPKEFFLLYGYGTHKFELIDTIK 242

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
               A  +             +   D G K+ +R   G+ ++ E +        L    Y
Sbjct: 243 YYIEAFHKK------------LDNYDIG-KQPVRFSNGLQQQREPNKKNFAKSLLNDFIY 289

Query: 595 ALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            L E G + A     + L   +  +R   Q +     S     +SL  C+ +   +  K 
Sbjct: 290 QLEEYGIYVASIAVVALLVEFEIKKR---QAETLVLRSIYRMAISL--CDNIRHFLVSKL 344

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL- 713
            + +D +       T E       + +  S                  TP+VQ  +  L 
Sbjct: 345 REDIDDDMSDDNVDTEE-------NIYNFS------------------TPRVQRFLHYLK 379

Query: 714 --LKYQHTEDFRAIIFVERVVAAL----VLPKVFAELPSL------SFVKSASLIGHNNS 761
                ++ +D   ++FVER         +L K  A +P L       F+   + I  N  
Sbjct: 380 QTFSNKNPKDICCLVFVERRYTCKSIYGMLLKYIASVPELKNVLVPQFMVGRNGINQNFD 439

Query: 762 QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
             +        I +FRDG   L++ +SV EEG+D++ CN VI  D  KT  +Y+Q++GRA
Sbjct: 440 TVLERKWQNSAIQQFRDGEANLMICSSVLEEGIDVQACNYVIILDPLKTFNSYVQTKGRA 499

Query: 822 RKPGSDYILMIERGNLSHAT-----FLRNARNSEETLRKEAIERTD--LSHLKDTSRLIS 874
           R   + ++++               +    R+    L+   +ER +  +  + +  R   
Sbjct: 500 RSKDAVFLILASESEKPKTAKRIMDYQNAHRDIANYLQDRVLERAEPKMDEINEHFR--- 556

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM----ERHEKPGG 930
            D +P     +  TG+++  +SA+ L+H YC  LPSD +    P + +    ER +  G 
Sbjct: 557 -DIIPP---YINETGSLLLASSALALLHRYCQTLPSDAFGFNMPWYKLLNPDERVQHFGK 612

Query: 931 PTEYSCKLQLPCNAPFE-KLEGPVCSSM----RLAQQAVCLAACKKLHEMGAFTDMLLP 984
             E   K  +  N P   KL   + S +    + A+ +     CK+L+++G      LP
Sbjct: 613 SAE--TKQVVSINLPLSTKLRSTIYSDLMNCNKSAKISAAFNVCKELYKLGELNQKFLP 669



 Score =  162 bits (411), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 217/478 (45%), Gaps = 96/478 (20%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P   S+ L A+T++ C + F  ER ELLGD++LK   + +L   +   +EG LT+++  +
Sbjct: 1194 PAEQSEFLTAITSSGCSDVFDMERLELLGDSFLKMSATLYLSSIHSNWNEGVLTQIKSTL 1253

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPG------VLPVFDEDTKDGDSSL---- 1489
            VSN  L        + S I +  F P   W  PG      +L ++ E  +     L    
Sbjct: 1254 VSNRNLLYCMNETDIPSRINSTLFTPKYTWKPPGLSLPHNILNLWQEQPEVAKFVLPRNL 1313

Query: 1490 ----FDQEKSVAEDKLGTDKNYNEY------------EDDDMEDGELEGDSSSYRVLSSK 1533
                  +E+  +  KL T  N+ ++             D + E     G S     LS+K
Sbjct: 1314 CALQLTEEEIFSLGKL-TPANFEKFLESCQANTNYTSTDYESEMNFCIGKSK----LSNK 1368

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP-------------SRPA 1580
             +AD +EAL+GV     G      ++++ GI  + D   +G P             +R  
Sbjct: 1369 VVADTLEALLGVIVKNYGVQHGFRILEYFGICKQVD---IGKPLSQLLDLQLGSTRTRAD 1425

Query: 1581 CVPESVL-RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLD 1638
              P  +    +++H LE  L   FKDR  L++A+TH S P++ ++ CYQ LEF+GDA+LD
Sbjct: 1426 RDPREIDGLLINYHYLERNLGYTFKDRAYLLQALTHPSNPTNRLTGCYQELEFIGDAILD 1485

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF- 1697
             LI+ ++F     + PG+LTDLR+A VNN   A + V+H+ H+ +   ++ L   I  F 
Sbjct: 1486 FLISAYIFERNIRMNPGQLTDLRSALVNNTTLACICVRHRFHLFILAENTLLTESINSFV 1545

Query: 1698 -------------VKEVLEE---------------------------LLKPGFNSFGLGD 1717
                         V+ +LEE                           L K   N     +
Sbjct: 1546 DFQEKHMHRVTHHVRILLEENDIQCHNPLDEEDELEMADNLSTNDEPLAKGNLNMS--EN 1603

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQE 1773
               PK LGD+VE++  A++LD  +D    W+V   L +P +      +P++P+R+L E
Sbjct: 1604 VDVPKALGDVVEALIAAVYLDC-KDLQKTWEVVYRLFEPELIEFSRNVPINPLRQLNE 1660



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 36/227 (15%)

Query: 1387 ILEALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            +L+ALT  S    + T CY+  E +GDA L +++S ++F +  + + GQLT +R  +V+N
Sbjct: 1455 LLQALTHPSNPTNRLTGCYQELEFIGDAILDFLISAYIFERNIRMNPGQLTDLRSALVNN 1514

Query: 1444 LVLY---------------QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
              L                   L++ + S++        R     V  + +E+     + 
Sbjct: 1515 TTLACICVRHRFHLFILAENTLLTESINSFVDFQEKHMHR-VTHHVRILLEENDIQCHNP 1573

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
            L ++++    D L T+       D+ +  G L   + S  V   K L DVVEALI   Y+
Sbjct: 1574 LDEEDELEMADNLSTN-------DEPLAKGNL---NMSENVDVPKALGDVVEALIAAVYL 1623

Query: 1549 EGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHAL 1595
                D  +    W  +    +PE +        VP + LR ++ H L
Sbjct: 1624 ----DCKDLQKTWEVVYRLFEPELIEFSRN---VPINPLRQLNEHRL 1663



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 21/153 (13%)

Query: 1234 DLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IVT   A++  KR  V  +  + T  S     +        ++Y DY   KY   
Sbjct: 885  DFEGKIVTQWYASYQDKRMLVTKVHRDKTPFSMMESNQSE------NNYYDYTMSKYKNV 938

Query: 1290 --ELIFKKQPLIRGRGVSYCKNL-LSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHP 1346
              +++ + Q LI  R ++   N  ++ R + S + +            + L PELCF   
Sbjct: 939  IGDVVHQNQCLIEVRELTQQLNFYIAHRVKTSGQSKARAR--------IILIPELCFNFQ 990

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
             PG L      LPSI+ R+  +L A  L+ ++N
Sbjct: 991  FPGDLWAKLLFLPSILNRLHYLLHAEALRQRMN 1023


>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
          Length = 1441

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/432 (33%), Positives = 225/432 (52%), Gaps = 41/432 (9%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            +++ ALT+    + F  ER E LGD+YLK++VS +L+  +P  +EG LT ++ +M+ N  
Sbjct: 1016 QVMYALTSKMGLDAFDLERLETLGDSYLKFIVSLYLYTIFPNYNEGSLTVLKGKMIGNRN 1075

Query: 1446 LYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKS---VAEDKL 1501
            LY   + K +   ++ D F A S + AP    VF +  K     L +++ S   + E ++
Sbjct: 1076 LYYCGIKKNIPGRMKVDDFIASSNFIAPA-YTVFRQLQK----QLLEKKVSPNVLYEIQI 1130

Query: 1502 GTDKNYNEYEDDDM-----------EDGELEGDSSSY---RVLSSKTLADVVEALIGVYY 1547
               + +N    ++            E  E +     Y   + +  KT+AD VEALIGVY 
Sbjct: 1131 PKHEQFNGSISEETGIKIQEKVLNWETAESQTGMEHYLGIQTVPDKTVADCVEALIGVYL 1190

Query: 1548 VEGGKDAANHLMKWIGIQV-ESDPEE-VGCPSRPACVPESVLRSVDFHA-LEDALKIKFK 1604
               G   A  L+KW  I   E+D    +   S    V E++ R + + + +E  L  +F+
Sbjct: 1191 ENLGIKNAITLLKWFQILPNETDAHRLLHDISENIVVDENINRFMPWASDIETKLGYRFE 1250

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            +R LL++A TH S  ++ V+ CYQRLEF+GDA+LD LIT +++ +  NL PG LTDLR+A
Sbjct: 1251 NRALLLQAFTHPSYTANNVTECYQRLEFLGDAILDFLITCYIYENCGNLTPGALTDLRSA 1310

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-----------EVLEELLKPGFNS 1712
             VNN  FA ++V++ LH  L   +  L+  I  FVK           E+L  LL+    +
Sbjct: 1311 LVNNITFACLSVRYGLHTALLAYAPNLNDVIHRFVKFQEERDHIVNDELLWILLEEDECN 1370

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRE 1770
                    PKVLGD+ ES+ GAI+LDSG++    W++    +   +    + +P  PVR 
Sbjct: 1371 MA-EHVDVPKVLGDLYESVIGAIYLDSGKNLRKTWEIIYSFMHKEIDEFSKNIPKQPVRV 1429

Query: 1771 LQERCQQQAEGL 1782
            L E    Q + L
Sbjct: 1430 LYETQGAQPQFL 1441



 Score =  173 bits (439), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 94/220 (42%), Positives = 133/220 (60%), Gaps = 5/220 (2%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKV 361
           AR YQ+D+LE A ++NTI +L TGAGKT IAV LI  +  D++R     K   +F+V  V
Sbjct: 10  ARTYQVDLLEVALRQNTIVYLPTGAGKTFIAVKLIEELSADIRRPYNEGKKHTIFVVNTV 69

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           PLV QQ+E I   TG +     G+   DFW  Q W ++ +  QVLVMTAQIL++ L H  
Sbjct: 70  PLVVQQSEYIGRLTGLLCSPLSGDCNVDFWKDQEWNQQLEKYQVLVMTAQILVDALSHGY 129

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           I +  INL+I DECH AV  HP   +M +F+   S  ++P V  ++AS +N     S+VD
Sbjct: 130 IYLRNINLIIFDECHRAVNDHPMRQIM-QFFERCSNNEQPKVLALSASLLNSNVKLSKVD 188

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
             IK  +LE    + V T+   ++L+ + P+P +V+VEYD
Sbjct: 189 SMIK--SLEITFQAKVATVNSFEQLQNYYPVPQQVIVEYD 226



 Score = 88.2 bits (217), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 16/236 (6%)

Query: 703 TPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPS----LSFVKSASLIG 757
           T K+ SL+K    K    + F  IIFV++     VL +V   L        F+K   ++G
Sbjct: 356 TRKLFSLLKEFYNKRSEGQQFCCIIFVQQRFTVNVLYQVLKNLAEHDEEYKFLKPEFMVG 415

Query: 758 HNNSQEMRTFQM-------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
            +N+      +        +  + +F++G    ++AT V +EG+DI  C +VIRF+L   
Sbjct: 416 FSNNPYKNCIESLCIAKCNKAALLRFKNGLSNCIIATDVIDEGIDIPTCTLVIRFNLPMD 475

Query: 811 VLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE----RTDLSHL 866
           V AYIQS+GRAR   S Y+L++ +G++ +       +  E+ L++  +     RT  +  
Sbjct: 476 VRAYIQSKGRARFASSHYVLLVPKGDIDYLKRYEQFQMVEKYLQQLLVSENNVRTKPTEN 535

Query: 867 KDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
           +  + L   +  P  V         V+  SA+ LI+ YC  L   ++  L P +I+
Sbjct: 536 EIKNVLYKYNIEPYAVTDENGITYTVTEQSAIALINRYCVSLLKSKFVYLVPCWIL 591



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 38/246 (15%)

Query: 1151 DVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASG------L 1204
            +V +  N  TL     E  + K+ H + F Q       I   I  F +   S       +
Sbjct: 672  NVSVKVNNTTLVLSEEEIEYIKIFHTLIFSQ-------IVQVIKSFMLFDNSNRDNCFLV 724

Query: 1205 VP-------DREAMQIHNA---DMPTGKLMMADSCANAGDLEGRIVTAAH--SGKRFYVE 1252
            VP       + E ++ HN+     P+      +S     D E  +V   +  S   + V 
Sbjct: 725  VPVDENEKINWEVIKEHNSVERIPPSIPFRFKNS-----DYELALVIPTYRPSPDVYIVT 779

Query: 1253 SIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLS 1312
             I  ++T  S FP    +       SYA YYK+K+G+ +   KQP++  + +S   N + 
Sbjct: 780  QICEDLTPNSCFPTDNFF-------SYAHYYKEKHGLIINDLKQPMLEVKAISRKINYIK 832

Query: 1313 PRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAI 1372
            PR   +  ++ +  ++  K +   L PELC     P         LPSI+ RV  +L+A 
Sbjct: 833  PRRMQNNSKKRKIADVY-KDFKEHLVPELCIRITFPALYWLKTTLLPSILHRVSQLLIAE 891

Query: 1373 QLKDKI 1378
             L+  I
Sbjct: 892  DLRSTI 897


>gi|291000766|ref|XP_002682950.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
 gi|284096578|gb|EFC50206.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
          Length = 1386

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 184/704 (26%), Positives = 307/704 (43%), Gaps = 133/704 (18%)

Query: 332 LIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV------------- 378
           ++A++LI  + N+ ++ +KK+  VF+     LV QQAE IR    Y+             
Sbjct: 1   MVAIMLIDYMLNETEQNDKKL--VFIAENRILVNQQAEHIRSTLKYLETERLEQQDSKSI 58

Query: 379 ----------VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAIN 428
                     V  Y G+ G    +  R  +E   K+V+V TA  L N+L H+II+ME+I+
Sbjct: 59  DNISKNIDGMVACYVGDSG--LLNKLRSNKELKKKKVIVTTAAFLQNLLTHNIIEMESIS 116

Query: 429 LLILDECHHAVK-KHPYSLVMSEFYHTTSK-EKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
           LLI+DECHH     HPY ++M+++YHT  + EKRP +FGMTAS +      ++    ++ 
Sbjct: 117 LLIIDECHHCGDGDHPYKVIMTQYYHTIKQVEKRPKIFGMTASAIR---SLNETKANLQK 173

Query: 487 CNLESKLDSVVCTIKDR----KELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
             LE+ LD  + TI        EL +H  +P+E+++ Y+   S  +  + LK     + E
Sbjct: 174 QKLEAYLDCKLTTISSEDELYSELREHTNLPNEIILTYESTNSESTKIDDLKDFCTLIVE 233

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
                   +K+  +  +D         +  +S    +D            NY L  LG  
Sbjct: 234 NL------TKFSTIQTKD---------IIEISRILFND-----------FNYILDNLGSS 267

Query: 603 CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
           C           ++  ++ N  L         S++VS       +     ++ +++ SE 
Sbjct: 268 CLKDYLTIIFDHIEERKQENQSLST-------SELVSFSSDSSYQQLKKNQEFEIIVSE- 319

Query: 663 GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDF 722
                 TN+IE+                 I        K+    + L +   +   T   
Sbjct: 320 SVRNKLTNKIEK-----------------IFPKPSPSRKLKLLEEVLNEHFPENNTTNQM 362

Query: 723 RAIIFVERVVAALVLPKVFAE--LPSLSFVKSASLIGHNNSQEMRT---------FQMQE 771
           R I+F ER   A++L + FA+  LP         +IGHN +  +RT         F+ + 
Sbjct: 363 RCIVFCERRHTAILLSRYFAKKGLPC------DFIIGHN-ALSVRTKLGFKKNTGFEQKS 415

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL-AYIQSRGRARKPGSDYIL 830
              +FR G +  L  T+V EEG D+  CN+VIRFD     L AYIQSRGRARK  S +I+
Sbjct: 416 KTERFRSGELKCLFCTNVVEEGFDVPACNLVIRFDKFTDFLRAYIQSRGRARKQESKFIM 475

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERT-DLSHLKDTSRLISVDAVPGTVYQVESTG 889
           M+   +L+     +N +  +E +  +  + T + S ++D             +Y+  S  
Sbjct: 476 MVNSTDLTQQELCKNGKRLQEKMLTQISDDTPNNSEIEDI-----------LIYETPS-K 523

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
           A ++LN+++ L + YC+  P+      +P+F +       GP  +  ++  P N P    
Sbjct: 524 AKLTLNNSIRLYNQYCAVFPNQSIDEKKPKFSI----YADGPF-FVTEITFPTNCPVPVF 578

Query: 950 -------EGPVCSSM-RLAQQAVC-LAACKKLHEMGAFTDMLLP 984
                  + P    + +L  +  C   A + LH+     D L P
Sbjct: 579 SISNNHEDDPAQYRLNKLVSKRYCAFKAVQLLHKYKELDDSLFP 622



 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/575 (23%), Positives = 248/575 (43%), Gaps = 109/575 (18%)

Query: 1204 LVPDREAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESS 1263
            ++P ++A Q H  D+P   ++          L+  I+   ++ + + +++I ++   +S 
Sbjct: 763  IIP-KQAQQ-HFIDVPVLDIIQHHGKEAENILKNMILETIYNHRVYLLQNIEFDKNPKSH 820

Query: 1264 FPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEG 1323
            F  ++       +  Y  YYK+K+G+E+   +QPL+R            PRF      + 
Sbjct: 821  FDTED-------FPDYKTYYKEKWGLEIERPQQPLLRA---------YQPRFSTLGSTQV 864

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--P 1381
            E + I       FL PE          ++R  +  P  + R  + L+      +     P
Sbjct: 865  EHQNI-------FLVPEFLTACSFTIEMLRFLKLAPEFLYRYYNRLITSIFSKQFELFQP 917

Query: 1382 VPASKILE-------------ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            +  + +LE             ALTA   Q    YE+ E  GD+ LK++VS+ ++ ++P  
Sbjct: 918  IVDATLLEDGKTLEAFELLEEALTAKRSQVGANYEKLEFFGDSILKYIVSKHIYHEFPLY 977

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
              G L++++ + VSN  L   A +  L  +I  +    S+                    
Sbjct: 978  SSGSLSQLQHKFVSNYFLASVARNTRLPLFIITEPLNTSQLV------------------ 1019

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGV-YY 1547
                        +G  K+ N++ D+   + E             K LADVVE++IG  Y+
Sbjct: 1020 ----------QNIGGFKS-NKFADETNIEAEY------------KVLADVVESIIGFCYH 1056

Query: 1548 VEGGK-DAANHLMKWIGIQVE----SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIK 1602
            + GG  +  N  +  +G+ +     S  E++    +           +D + L + L  +
Sbjct: 1057 IFGGSLEQINRFLGLVGVSLPKGEISGSEDIFMNQKLLLRNHFEKLKIDLYKLTEKLNFQ 1116

Query: 1603 FKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY---TNLPPGRLTD 1659
            F++ GLL+EA  H S   +GV  Y+RLEF+GD+VL  ++T  +F  +   ++   G ++ 
Sbjct: 1117 FENSGLLLEAFIHPSY--NGVFNYERLEFLGDSVLGLIVTSKIFEKFHKNSSFSLGMMSK 1174

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
            LR   V N+NFA + ++++L  ++    + + +Q+                      D +
Sbjct: 1175 LREKIVMNKNFANLCIENQLQNYIIFSGNHIAQQVVH-----------------SKDDGE 1217

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
              K+L D+ ES+AGA+F+DS  D   V  ++   L
Sbjct: 1218 YVKMLSDVFESLAGALFVDSHYDLDTVKLIYDEFL 1252


>gi|224064945|ref|XP_002301611.1| predicted protein [Populus trichocarpa]
 gi|222843337|gb|EEE80884.1| predicted protein [Populus trichocarpa]
          Length = 303

 Score =  188 bits (477), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 156/254 (61%), Gaps = 13/254 (5%)

Query: 1591 DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            D   +E+ L  KFK + LL EA+THAS      S Y+RLE+VGD+VL+ L TK  +F Y 
Sbjct: 53   DLDEVEEILHYKFKSKKLLEEALTHASFSDQCFS-YERLEYVGDSVLNLLFTKEQYFLYP 111

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
            +LPPG LT LR+A V+ E  ARVA+KHKLH +LRH    L+ QIR+F + +L+  L    
Sbjct: 112  DLPPGPLTRLRSANVDTEKLARVAIKHKLHRYLRHKMPLLEEQIREFSQAILDYPLHSN- 170

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRE 1770
                 G  + PK L DIVE+  GA+F+DS     VVW++F+ LL+P+++ ETL +HPV E
Sbjct: 171  -----GLVETPKALADIVEAAIGAVFIDSNFSIDVVWKIFKDLLEPIISQETLKVHPVTE 225

Query: 1771 LQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQ-NPQKKMAQKLAARNAL----A 1825
            L E CQ++   +++      N+A  +V+ID   VG      +K++A   AA+NAL     
Sbjct: 226  LYEVCQKRNLKVKFVDLWKENMA-FDVFIDDQFVGRGTYGLKKEIAHNRAAKNALNNIRK 284

Query: 1826 VLKEKETAEAKEKG 1839
            +L EK+ ++  E+ 
Sbjct: 285  ILSEKDCSDVDEQN 298



 Score = 48.1 bits (113), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 43/181 (23%)

Query: 1373 QLKDKINYPVPASKILE-ALTAAS-CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            ++++ ++Y   + K+LE ALT AS   + F YER E +GD+ L  + ++  +  YP    
Sbjct: 56   EVEEILHYKFKSKKLLEEALTHASFSDQCFSYERLEYVGDSVLNLLFTKEQYFLYPDLPP 115

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            G LTR+R   V    L + A+   L  Y++              +P+ +E  ++   ++ 
Sbjct: 116  GPLTRLRSANVDTEKLARVAIKHKLHRYLRHK------------MPLLEEQIREFSQAIL 163

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
            D                                 S+  V + K LAD+VEA IG  +++ 
Sbjct: 164  DYPL-----------------------------HSNGLVETPKALADIVEAAIGAVFIDS 194

Query: 1551 G 1551
             
Sbjct: 195  N 195


>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
          Length = 1442

 Score =  187 bits (474), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 214/850 (25%), Positives = 357/850 (42%), Gaps = 176/850 (20%)

Query: 285  CNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND 344
            C+ +      A    P    R YQL++L+Q+ K+N I  ++TG+GKT +AVL I++   +
Sbjct: 69   CDNETSGTPSATAMSP----RAYQLEMLDQSLKQNAIVVMDTGSGKTQVAVLRIKA---E 121

Query: 345  LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTK 403
            L R     +  FL P V L  QQ +VIR Q   V +    G    D W A  W    D  
Sbjct: 122  LDRSAPDKIIWFLAPTVALCGQQFDVIRLQAASVAMKLLTGNDQVDTWSADTWDTILDGV 181

Query: 404  QVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--P 461
            +V+V T Q+LL+ L H+ I ++  +L+I DE      KHP S +M++FYH      +  P
Sbjct: 182  RVVVSTYQVLLDALCHAFISIDRFSLIIFDE-----GKHPGSKIMTDFYHHNKHAAKSIP 236

Query: 462  SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDRKELEKHVPMPSEVVVEY 520
            ++ G+TA+P ++K     ++       LE+ LD+  +   + R+EL K V  P    + Y
Sbjct: 237  NILGITATP-SMKEDLENMEI------LEAVLDAKCISPTRHREELLKCVKRPQIYSIVY 289

Query: 521  DKAASL------WSLHEQLKQMEV-------AVEEAAQSSSRRSKWQFMGARDAGAKEEL 567
            D   SL      + L ++   +++        ++E     +RR+  + +   D   + ++
Sbjct: 290  DAPRSLQYTESMYRLRKEFLDLDIRKDPYILRLQEDPSDRNRRALVRAVEKYDTFVQNQI 349

Query: 568  RQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA----YKVAQSFLTALQNDERANY 623
            + ++G S        A ++Q          +LG W A    +K + +FL  +  D   N 
Sbjct: 350  KGLWGRS--------AEILQ----------QLGTWAADMYIWKSSAAFLARINTDAIFND 391

Query: 624  QLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVV 683
             +D   ++ YL+  +                 +V  S    +    +E+ E         
Sbjct: 392  WIDA--EKKYLADFIR----------------RVSPSCPASMPQSGSEVSE--------- 424

Query: 684  SGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE 743
                             K T  V+ L+ +       E    +IFV+    A  L +    
Sbjct: 425  -----------------KATALVRELVSV------EESTVCLIFVKERATAGALREFLVS 461

Query: 744  LPSL-SFVKSASLIGHNNSQEMRTFQMQETIAK----------FRDGRVTLLVATSVAEE 792
             P +    +  S++G +N Q  R   + E + +          FR G++ +L+ATSV EE
Sbjct: 462  CPRIVEKHRIGSMVGTSNYQS-RKLALYELVGQSSDPMAALQSFRSGKINILIATSVLEE 520

Query: 793  GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEET 852
            G+D+  CN+VI FD  +T  +++Q RGRAR   S  IL+ E              +S   
Sbjct: 521  GIDVPACNMVICFDHPQTPKSFLQRRGRARMKESKLILLSE-------------HSSSAV 567

Query: 853  LRKEAIERTDLSHLKDTSRLI-------SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
             + EA+E    +  +DT R I       + +    T  +VESTGA +   +A   +  +C
Sbjct: 568  AKWEALEENMKAVYQDTQREIRAIQSMENSEESSSTFMEVESTGARLDFENAKSHLEHFC 627

Query: 906  SQLPSDRYSILRPEFIMERHEKPGGPTE--YSCKLQLPCNAPFEKLEGPVCSSMRLAQQA 963
              L    +   RP++I+  HE     ++   S  + LP   P +  +     S R  + A
Sbjct: 628  RVLSQGEFVDSRPDYIIHSHEDCDSSSKPRLSATVLLPSFVPSQLRQIDSKFSWRSEKNA 687

Query: 964  V---CLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
                   A + L+E G     LLP K               E +PG        PE   D
Sbjct: 688  TKDAAFQAYQTLYEAGLVNKHLLPFK--------------YEDIPGVETRA---PEVEVD 730

Query: 1021 ILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS 1080
             L   W    +    G +    ++Y++KC ++       +   S++ VLF     AEL+ 
Sbjct: 731  ALLNPWFGVAKAWTEGDQ---SWLYSLKCYDH-------MHGESEYNVLFP----AELSE 776

Query: 1081 LKNFHVRLMS 1090
            L+N  + L S
Sbjct: 777  LRNIQLYLNS 786



 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 184/445 (41%), Gaps = 76/445 (17%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---I 1387
            K Y   +P     +  +P    +    +PS+M  +E  L+A +L   I   +  +    +
Sbjct: 932  KPYPRVIPLSWATVDSIPLKFAQFGMLIPSLMHELEVTLIAKELSTTILERINITDLRLV 991

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
             EA+++ S  E   YER E LGD+ LK+  +  +   +P+  EG L+  + ++VSN  L 
Sbjct: 992  REAISSRSAAEPVNYERLEFLGDSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVSNSRLS 1051

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+  GL  +I    F   +W      P++ E+       +                  
Sbjct: 1052 RAAIDVGLAKFILTKTFTGQKWR-----PLYLENYTGNPGKV------------------ 1088

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                              S R LS+KTLADVVEALIG  YV GG   A   +     +++
Sbjct: 1089 ------------------SPRKLSTKTLADVVEALIGASYVNGGITKALSCISLFVNEIQ 1130

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCY 1626
                            +      +   LE  +  +F  + LL+EA+TH S         Y
Sbjct: 1131 WQDVSANRALFFKMARDQDKLPAELKPLEHLVGYQFNKKSLLIEAMTHQSCMFDYQRRSY 1190

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK-------- 1678
            + LEF+GDA+LD +I + ++ +   L P ++  L+ A VN +  A +++ H+        
Sbjct: 1191 EHLEFIGDAILDFIIVRKMYTAEPLLAPHQMHSLKTAMVNADFLAFLSLDHQMRRTETAV 1250

Query: 1679 ---------------LHVHLRHGSSALDRQIRDFVK-------EVLEELLKPGFNSFG-L 1715
                           L   +RH S A+  +    +K       E+L  L +     +  L
Sbjct: 1251 TSDLQIVDKETTPLALWTFMRHSSEAIGIEQATTLKRYEALRGEILATLRQGSHYPWALL 1310

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDSG 1740
               +A K   DI ES+ GA+++DSG
Sbjct: 1311 AGLQAKKFYSDIFESLLGAVWVDSG 1335


>gi|380706515|gb|AFD97515.1| dicer, partial [Hymenolepis microstoma]
          Length = 1897

 Score =  186 bits (473), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 160/529 (30%), Positives = 242/529 (45%), Gaps = 99/529 (18%)

Query: 1374 LKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQL 1433
            L+++I Y    + IL++LT  +  +    ER E +GD++LK+ V+ +L+LKYP   EG L
Sbjct: 1404 LENRILYRPGPAMILQSLTRLAAGDFINMERLETIGDSFLKFAVTTYLYLKYPDAQEGSL 1463

Query: 1434 TRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS-RWAAPGVLPVFDEDTKDGDSSLFDQ 1492
            +  R  +V N  LY++   K L   I    F P   W  P  +   D  + D  S L   
Sbjct: 1464 SLFRSHVVENSNLYRFGCGKKLPGRIVGVAFEPQENWLPPCYVCNSDNSSADDSSRL--- 1520

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK 1552
                                             +++ LS+K++AD VEAL+G Y  E G+
Sbjct: 1521 -----------------------------QMVQTHQFLSNKSIADCVEALVGCYLTERGE 1551

Query: 1553 DAANHLMKWIGIQVESDPEEVGCPSRPACVPES-------------VLRSVDFHALEDAL 1599
             +A  L++W G++      E+     P  +P+              +     +  LE+ +
Sbjct: 1552 RSALKLLQWFGVECLPPSSEMQPTGAPWKMPDERGLTEAEKIEIDRIYHVSRYDKLENTI 1611

Query: 1600 KIKFKDRGLLVEAITHAS------------RPSS---GVSCYQRLEFVGDAVLDHLITKH 1644
              +FK+R LL+EA+TH++             PSS   G   Y+RLEF+GDAVLD+ +T+ 
Sbjct: 1612 GYRFKNRRLLIEALTHSTCRDLHSNPSVNNTPSSVFFGNGGYERLEFLGDAVLDYTVTRV 1671

Query: 1645 LFFS-----YTNLPPGRLTDLRAAAVNNENFARVAVKH-KLHVHLR-------HGSSALD 1691
            LF S        L PG LTDLR+A VNN  F  +AV H  LH +LR        G+SA  
Sbjct: 1672 LFESTDGETVRELSPGGLTDLRSALVNNAVFGALAVTHCGLHAYLRGTAPYLTEGTSAFL 1731

Query: 1692 RQIRDFVKEVL--EELLKPGFNSFG-LGDCK-----------------APKVLGDIVESI 1731
            R IR+  +  L  + LL P  N+   L D +                  PK LGD+ ES+
Sbjct: 1732 RHIRNVSRGSLNSKRLLTPDSNTVARLNDAENQADSGAVRPSNEMEAEVPKALGDVFESL 1791

Query: 1732 AGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRS 1789
            AGA+FLDSG   + +W++F PLL   +      +   PVR L E+  ++ +  E    R 
Sbjct: 1792 AGAVFLDSGLCLNTLWRIFFPLLRERIERYSTCVAKSPVRRLLEQYPERVK-FEKPMVRP 1850

Query: 1790 GNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
                 + V + G+   V      ++A+  AA   LA  + KE A    +
Sbjct: 1851 DGKIRLVVRVVGIGRYVGIGRTYRLAKSAAA--DLAYRRAKEAANLNSR 1897



 Score = 49.3 bits (116), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 48/211 (22%)

Query: 1373 QLKDKINYPVPASKIL-EALTAASCQETFC-----------------YERAELLGDAYLK 1414
            +L++ I Y     ++L EALT ++C++                    YER E LGDA L 
Sbjct: 1606 KLENTIGYRFKNRRLLIEALTHSTCRDLHSNPSVNNTPSSVFFGNGGYERLEFLGDAVLD 1665

Query: 1415 WVVSRFLFLKYP-----QKHEGQLTRMRQQMVSNLVLYQYALSK-GLQSYIQADRFAPSR 1468
            + V+R LF         +   G LT +R  +V+N V    A++  GL +Y++        
Sbjct: 1666 YTVTRVLFESTDGETVRELSPGGLTDLRSALVNNAVFGALAVTHCGLHAYLR-------- 1717

Query: 1469 WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD--DMEDGELEGDSSS 1526
                G  P   E    G S+     ++V+   L + +      +    + D E + DS +
Sbjct: 1718 ----GTAPYLTE----GTSAFLRHIRNVSRGSLNSKRLLTPDSNTVARLNDAENQADSGA 1769

Query: 1527 YRVLS------SKTLADVVEALIGVYYVEGG 1551
             R  +       K L DV E+L G  +++ G
Sbjct: 1770 VRPSNEMEAEVPKALGDVFESLAGAVFLDSG 1800



 Score = 43.1 bits (100), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 47/246 (19%)

Query: 745 PSLSFVKSASLIGHNNSQEMRTFQMQE-TIAKFR-DGRVTLLVAT-SVAEEGLDIRQCNV 801
           P   FV     I  + S ++ T   QE T+A FR  G V LLV T S       + +CN+
Sbjct: 619 PGYFFVPKT--IDKSKSTDLSTANTQEETVANFRCGGEVNLLVTTQSGLAAASTLPKCNL 676

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLR----NARNSEETLRKEA 857
           V  F  + ++  Y+ ++ R R       +   +  L H  FL     + RN  + + +  
Sbjct: 677 VASFHPSNSIETYLLAKSRLRLVS----IKTTKARLWH--FLEPSKISMRNQFQEIERML 730

Query: 858 IERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
           I+R   S L      + +  V      +    A    + A+ +I+ YC++LP +  + L 
Sbjct: 731 IQRCSRSGLSLNEHDVDLKFVDEAFDFLPKRNA----SRAIDVINHYCARLPCNFMTRLA 786

Query: 918 PEF-IMER----------------------HEKPGGPTEYSCKLQLPCNAPFEKL---EG 951
           P + ++ R                      H+ P     Y C LQ+P N+P  ++   + 
Sbjct: 787 PRWNLISRPLVDVKSELGDSGKILTCPDTDHKDPK--VAYRCALQMPSNSPINQVVWGDW 844

Query: 952 PVCSSM 957
            VC  M
Sbjct: 845 SVCKKM 850


>gi|297834980|ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297331212|gb|EFH61631.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 391

 Score =  186 bits (473), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 193/358 (53%), Gaps = 21/358 (5%)

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDA 1635
            PS P+      + S++  ALE  L  KFK++ LL EAITH S   +    Y+RLEFVGD+
Sbjct: 46   PSAPSVPVTPEMESME--ALEKILNYKFKNKSLLKEAITHTS--CTDFPSYERLEFVGDS 101

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
             +   I+ +L+ +Y +L P +L+ LRAA V+ E  ARV + H L+  LR  + +LD +++
Sbjct: 102  AIGLAISNYLYLTYPSLEPHQLSLLRAANVSTEKLARVTLNHGLYQFLRRNAPSLDEKVK 161

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +F   V +E     F+    G  KAPKVL D+ ES+AGA+++D   D   +W +F+ LL+
Sbjct: 162  EFSDAVGKE---DDFSVAYGGLVKAPKVLADLFESVAGAVYVDVNFDLQRLWVIFRGLLE 218

Query: 1756 PMVTPETLPM--HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            P+VT + L     PV  L + C +  + ++ K  + GN++  ++Y+D   +   +   K 
Sbjct: 219  PIVTLDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNISIADIYLDDEFLASGRAENKD 278

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            +A+ +AA+ AL  L E    E     D    + K+      +  LN+ICL++ WP P+Y 
Sbjct: 279  IARLIAAKEALRKLSEVFPVEMVIDEDSVEIELKHA-----KTKLNEICLKKKWPKPIYS 333

Query: 1874 CVREGGPAHAKRFTYAVRVNTTDKGWTDECV---GEPMPSVKKAKDSAAVLLLELLNK 1928
               +    H KRF  + ++       T+E +   G+    +KKA+ S+A  ++  L K
Sbjct: 334  IEEDRTSVHGKRFVCSAKIKIP----TEETLYMKGDEQSKIKKAESSSAYHMIRALRK 387



 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 1374 LKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
            L+  +NY      +L EA+T  SC +   YER E +GD+ +   +S +L+L YP     Q
Sbjct: 63   LEKILNYKFKNKSLLKEAITHTSCTDFPSYERLEFVGDSAIGLAISNYLYLTYPSLEPHQ 122

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPS 1467
            L+ +R   VS   L +  L+ GL  +++  R APS
Sbjct: 123  LSLLRAANVSTEKLARVTLNHGLYQFLR--RNAPS 155


>gi|115468004|ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
 gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName: Full=Ribonuclease 3-like protein 3; AltName:
            Full=Ribonuclease III-like protein 3; Short=RNase
            III-like protein 3
 gi|51091751|dbj|BAD36550.1| CAF protein-like [Oryza sativa Japonica Group]
 gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa Japonica Group]
 gi|125597181|gb|EAZ36961.1| hypothetical protein OsJ_21299 [Oryza sativa Japonica Group]
          Length = 299

 Score =  186 bits (473), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/242 (48%), Positives = 150/242 (61%), Gaps = 15/242 (6%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHAS-----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            A+E  L  +F+D+ L+ EA+TH S     RP  GV+ Y+RLE++GDAVL  ++++ +F +
Sbjct: 41   AVESLLGYEFRDKALVEEALTHGSFYYPYRP--GVT-YERLEYLGDAVLTCVVSREVFLT 97

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            Y  L PG LT LRAA V+ E  ARVAV H LH  LRH +  LD QI DF+    EEL   
Sbjct: 98   YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFI----EELSMY 153

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPV 1768
              +S GL D   PKVL D+VES+ GAI+ DS  +  +VWQVFQ L DP+++ ETL  HPV
Sbjct: 154  PIHSNGLLD--PPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPV 211

Query: 1769 RELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNALAVL 1827
             EL E CQ+   G++          TVEV IDG  VG A   QKK +AQ  AA+ AL  L
Sbjct: 212  SELFEFCQKTRRGVKIVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDKL 271

Query: 1828 KE 1829
            KE
Sbjct: 272  KE 273



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 88/216 (40%), Gaps = 56/216 (25%)

Query: 1359 PSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETF----CYERAELLGDAYLK 1414
            P  +  VES LL  + +DK       + + EALT  S    +     YER E LGDA L 
Sbjct: 36   PGEVAAVES-LLGYEFRDK-------ALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLT 87

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
             VVSR +FL Y Q   G LTR+R   V    L + A+  GL  ++        R  AP +
Sbjct: 88   CVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFL--------RHKAPNL 139

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
                     DG  + F +E S+          Y  + +  ++                K 
Sbjct: 140  ---------DGQITDFIEELSM----------YPIHSNGLLD--------------PPKV 166

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            L DVVE+LIG  Y +      N  + W   Q  +DP
Sbjct: 167  LCDVVESLIGAIYCDSN---FNQEIVWQVFQKLADP 199


>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
          Length = 338

 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/337 (35%), Positives = 188/337 (55%), Gaps = 11/337 (3%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            ALE  L   F ++ LL EA+TH S  +S  + Y+RLEFVGD+ +   +T + F +  +L 
Sbjct: 7    ALERILSYNFNNKSLLEEALTHPSYSAS--ASYERLEFVGDSAIGLAVTNYFFLASPHLH 64

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
             G L+ LRAA V+ E  ARVAV H L+ ++R  S A+D ++++FV  V    L+     +
Sbjct: 65   QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSV---ALEGSSVPY 121

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPKVL DIVES+AGAI++D   D   +W + + LL+P+ T E L +   PV  L
Sbjct: 122  G-GMMKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             + CQ+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  L +  
Sbjct: 181  FQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 1832 TAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVR 1891
                K     +G       +   +Q L+D+C +R W  P Y   ++ GP+H + F  +V+
Sbjct: 241  DTRIKTFVTIDGIDESFEIEG-AKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSVK 299

Query: 1892 VNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            + T     T   VG+    VK A++SAA L++  L +
Sbjct: 300  IATCYG--TFYIVGDEKSRVKDAENSAASLMIRALQE 334



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 44/181 (24%)

Query: 1372 IQLKDKINYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            I L+  ++Y      +LE ALT  S   +  YER E +GD+ +   V+ + FL  P  H+
Sbjct: 6    IALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLASPHLHQ 65

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            G L+ +R   VS   L + A++ GL +Y++ D             P  D+  K+   S+ 
Sbjct: 66   GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDS------------PAMDDKVKEFVDSV- 112

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY--RVLSSKTLADVVEALIGVYYV 1548
                                         LEG S  Y   + + K LAD+VE++ G  YV
Sbjct: 113  ----------------------------ALEGSSVPYGGMMKAPKVLADIVESVAGAIYV 144

Query: 1549 E 1549
            +
Sbjct: 145  D 145


>gi|222625280|gb|EEE59412.1| hypothetical protein OsJ_11562 [Oryza sativa Japonica Group]
          Length = 422

 Score =  186 bits (472), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/196 (47%), Positives = 135/196 (68%), Gaps = 5/196 (2%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL+ LE+A + NT+AFLETG+GKTLIAV+L+R+  + ++R + +  AVFLVP V L
Sbjct: 34  ARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVL 93

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQA V+ + T  VV  +CGEMG DFWDA  W+ + +  +VLVMT QILL+ LRHS  +
Sbjct: 94  VGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFR 153

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
           ++ I LLI DECHHA    PY+ +  EFYH    +++ +  P +FGM+AS +  K + +Q
Sbjct: 154 LQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDL-NQ 212

Query: 480 VDCAIKICNLESKLDS 495
            + + +I  +E+ ++S
Sbjct: 213 HNYSKQISEIENLMNS 228



 Score = 43.5 bits (101), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 935 SCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
           +C L LP ++P + +   V     + ++ VCL AC++LH +GA TD LLP+
Sbjct: 312 TCTLHLPKSSPVQTVN--VEGEGSILKETVCLKACQELHAIGALTDSLLPE 360


>gi|442570278|sp|Q1DW80.3|DCL2_COCIM RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease DCL2; Includes: RecName:
           Full=ATP-dependent helicase DCL2
 gi|392868830|gb|EAS34630.2| dicer-like protein 2 [Coccidioides immitis RS]
          Length = 1435

 Score =  186 bits (471), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 185/731 (25%), Positives = 332/731 (45%), Gaps = 97/731 (13%)

Query: 290 GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
           G     +  +P  +AR YQL++L ++ ++N I  ++TG+GKT IA+L I+    +L+R  
Sbjct: 33  GTSKSQEALLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ---RELERCP 89

Query: 350 KKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLV 407
                 F+ P V LV QQ   I +Q   +      G      W  ++ W       ++++
Sbjct: 90  AHKFVWFMAPTVALVEQQHSAISKQLPAFQTRLLTGAANVSHWSTKKIWDDILLNIRIVI 149

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----RPSV 463
            T Q+LL+ L +  + +  I+LL+ DE HH V+  P + +M +FYH   +E+     P +
Sbjct: 150 STPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLPHI 209

Query: 464 FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDK 522
            G+TASP      + Q D  +    LE  L++V  T K  R+E+ + V MP    +EY  
Sbjct: 210 LGLTASPTTR---ARQTDLEV----LEINLNAVCVTPKMHREEMMQFVHMPEYRSIEYQP 262

Query: 523 AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGAR-DAGAKEELRQVYGVSERTESDG 581
               +S    ++++ V + E    +    K  FM  R D  +++ L       +    D 
Sbjct: 263 DVQNFS--SIVEKLSVIINELDIENDPFVK--FMRRRNDLKSRQRLLDALENKKTPCLDQ 318

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
               +++ R I+    ELG W +                          E +L++ +  L
Sbjct: 319 LKRCLRRSRVIHR---ELGPWAS--------------------------ERFLTRCIMGL 349

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
           + +    A   + A     +N ++            + S VVS  E     +G      +
Sbjct: 350 KSKQT-NASGPQWADWDREDNSYMLN----------VLSQVVSSTE-----MGVQNPPDE 393

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ KV  LI  L+  +H      I+F E     ++L ++ +  P    +K+ + +G + S
Sbjct: 394 LSRKVHKLIDFLV-LEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTTAFLGSSAS 452

Query: 762 QEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
              ++              I   R G+  L++AT+V EEG+D+  C++VI FDL K + +
Sbjct: 453 VSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRS 512

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRL 872
           +IQ RGRARK GS + L +   + + ++ L      E+T+++  +E +  L H++    L
Sbjct: 513 FIQRRGRARKKGSKFALFLHSEDRATSSELHLM---EKTMKQLYLENKRALEHIQ---YL 566

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +V+      ++V STGA+++L++A   +  +C  L S  +    PEF++E  +  G   
Sbjct: 567 ENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTL-SAEFIATDPEFVLEGDDTTG--- 622

Query: 933 EYSCKLQLP--CNAPFEKLEGPVC-SSMRLAQQAVCLAACKKLHEMGAFTDMLLP----- 984
            +S K+ LP   +    +  G +   + ++A++     A   L+E G   D L+P     
Sbjct: 623 -FSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMPAHHHI 681

Query: 985 -DKGSGEQQEK 994
            D+   EQ EK
Sbjct: 682 DDEDGLEQVEK 692



 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 192/456 (42%), Gaps = 98/456 (21%)

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---IL 1388
            T   F P   C +  LP    + A  +P ++  +E+  +A +L   I +PV  S    +L
Sbjct: 917  TAKCFYPANNCSVDRLPVEYSQFALFIPCLIHSIENYFIANELAQTILHPVGFSNLSLVL 976

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
             A+++++ +E   Y+R E LGD+ LK   S  L   +P   EG+LT  +  +VSN  L  
Sbjct: 977  TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLAN 1036

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL  +I    F  ++W                                       
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWRP------------------------------------- 1059

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
             Y  D +  G++   +   R +S+K LADVVEALIG   ++GG++   + +K     ++ 
Sbjct: 1060 SYNTDHINTGDM---TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKW 1116

Query: 1569 DPEEVGCPSRPACVPESVLRSVD----------FHALEDALKIKFKDRGLLVEAITHASR 1618
             P          CV  ++L   +             +E  +   FK + LL+ A+TH S 
Sbjct: 1117 SPLN-------ECV--NILHHQEDSFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSS 1167

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA------- 1671
              SG S YQRLEFVGD++LD ++ + LF S        +  +R A VN +  A       
Sbjct: 1168 KGSGHS-YQRLEFVGDSILDIIVVQELFESPRCFHHFDMHLMRTALVNADFLAFLCMNAY 1226

Query: 1672 --------------RVAV-----KHKLHVHLRHGSS-----ALDRQIRDFVK--EVLEEL 1705
                          RV V     +  L   ++H +S     A  R  + + K  E ++E 
Sbjct: 1227 REEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQYEKLHEEIDEK 1286

Query: 1706 LKPGFNSFGLGDCK--APKVLGDIVESIAGAIFLDS 1739
            L+          C+  A K   DIVESI GAIF+DS
Sbjct: 1287 LRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322



 Score = 52.0 bits (123), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 24/161 (14%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            + F +  L++ AI+  S  +   S YQRLEF+GD++L    +  L   +   P GRLT  
Sbjct: 967  VGFSNLSLVLTAIS--SSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMR 1024

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--FGLGDC 1718
            +   V+N   A  A++           + LD+ I    K       +P +N+     GD 
Sbjct: 1025 KGNIVSNGYLANAALQ-----------TGLDKFI--LTKPFTGAKWRPSYNTDHINTGDM 1071

Query: 1719 KAP------KVLGDIVESIAGAIFLDSGRDTSV-VWQVFQP 1752
              P      KVL D+VE++ GA  +D G +  +   ++F P
Sbjct: 1072 TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIP 1112


>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
          Length = 1917

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 238/519 (45%), Gaps = 92/519 (17%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P S IL+ALT ++  +    ER E +GD++LK+ ++ +LF  Y   HEG+L+ +R + 
Sbjct: 1374 PSP-SLILQALTMSNANDGINLERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQ 1432

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP---------------GV---------L 1475
            VSNL LY+    K L   + A +F P   W  P               GV         +
Sbjct: 1433 VSNLNLYRLGRQKMLGESMIASKFEPHDNWLPPCYYVPKELEQALIESGVPSAMWNQADI 1492

Query: 1476 PVF------DEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV 1529
            P F      ++  ++ +  L   +  +++ + G     N    D +    +  +  +   
Sbjct: 1493 PPFSRFSEINDLVRETEHKLEIIKSELSQSEHGALNGLNGLTGDPLRSF-IPYNLITQHS 1551

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDP--------- 1570
            +  K++AD VEALIG Y +  G   A   M W+GI V          +S P         
Sbjct: 1552 IPDKSIADCVEALIGAYLIACGPRGALLFMSWLGIHVLPTEEVVTISDSKPTDRLPGSTP 1611

Query: 1571 -----EEVGC-------------PSRPACV----PESVLRSV--DFHALEDALKIKFKDR 1606
                 EE G              P  P       PE  L  +   + +LE ++   F++R
Sbjct: 1612 YVELGEEGGSTKWTQLRYKKLQEPPSPLFYNVPQPEIELEIMLDGYDSLERSIGYTFRNR 1671

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A THAS +P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1672 SYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 1731

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLEELLKPG----FNSFG 1714
            NN  FA +AV+   H + RH S  L+  I  FV+        + EE    G      +  
Sbjct: 1732 NNTIFASLAVRCGFHKYFRHLSPGLNTVIDRFVRIQEENGHSISEEYYLIGEREFEEAEE 1791

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK LGD+ ES+AGAI+LDS      VW V+  ++   +      +P  P+REL 
Sbjct: 1792 AEDVEVPKALGDVFESLAGAIYLDSNMSLDAVWAVYFEIMKSEIEQFSANVPKSPIRELL 1851

Query: 1773 ERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVGVAQN 1809
            E   + A+  + +    G     TV+V+  G   G+ +N
Sbjct: 1852 ELEPETAKFGKPEKLADGRRVRVTVDVFGKGSFKGIGRN 1890



 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 153/327 (46%), Gaps = 37/327 (11%)

Query: 725  IIFVERVVAALVLPKVFAELP----SLSFVKSASLIGHNNSQ-------EMRTFQMQETI 773
            +IFV+  V A VL  +  E+     SL F+        +N +       E+   + +E +
Sbjct: 430  VIFVDDAVTAKVLFYLLNEMSKCEESLHFLSPLFTSEKSNDELFCGRDLELEYRKQEEVL 489

Query: 774  AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
             KFR     LL++T++ EEG+DI +CN V+RF+  K   +Y+Q + RAR   + ++L++ 
Sbjct: 490  KKFRIHECNLLISTAILEEGIDIPKCNFVMRFEFPKNYQSYVQCKSRARATDALHVLLVP 549

Query: 834  R-------GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
                      L+H  ++     S+ T  KEA E       ++T        +P      E
Sbjct: 550  EIESEVYIQRLAHYHYIEKILLSKCT-SKEADE------CEETEADAYDSVLPEYKPLDE 602

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
                 V+LNSA+ L++ YC++LPSD ++ L PE+ +           Y C L+LP N+P 
Sbjct: 603  EDAPKVTLNSAISLVNRYCAKLPSDTFTKLTPEWKINNITVENKQM-YICSLRLPINSPL 661

Query: 947  E-KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-----KGSGEQQE----KVD 996
            +  +      +  LA++   L  C  LH+     D LLP      K   E  E      D
Sbjct: 662  KYSISSYPMPNKALAKRMAALQMCVCLHKENEIDDYLLPVGKENFKAHPEDSEVPALPDD 721

Query: 997  QN-DEGEPLPGTARHREFYPEGVADIL 1022
            +N D  E  PGT + R++Y + +AD L
Sbjct: 722  ENMDLTEARPGTTKRRQYYYKKIADAL 748



 Score = 73.9 bits (180), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 18/136 (13%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   +  +SSFP  +       YS++ +YY +KYG+++   +QPL+     S   
Sbjct: 935  FYVAEICNHLNPKSSFPGAD-------YSTFEEYYSKKYGIQIQNLEQPLLDVDHTSARL 987

Query: 1309 NLLSPRFEH---------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+ +         SEE +    E L++     L  ELC IHP P SL R A  LP
Sbjct: 988  NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILIAELCAIHPFPASLWRQAVCLP 1045

Query: 1360 SIMRRVESMLLAIQLK 1375
             I+ R+ ++LLA Q++
Sbjct: 1046 CILYRINALLLADQIR 1061



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 21/222 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA------VFLV 358
           R +Q+++L  AK+KN I  L    GK      ++  +  +L   N++ L+      ++L+
Sbjct: 17  REHQVELLYSAKEKNIIICL----GKITEQTFIVTKVIQELAINNRRTLSHDGKRTIYLL 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
                  ++A  I++ T   V   C ++ +DF D++ +       QVL++T  +   +L 
Sbjct: 73  ENEEACTEKANHIKQLTDLKVLK-CNDV-KDF-DSKEFS---SNTQVLILTVDMCSKLLL 126

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + I    INLLI+D+CH+ V     S +++ F +  S  K   + G      +L     
Sbjct: 127 ANKINPNQINLLIIDKCHNLVTNCKLSKILNIFRNCDSTTK---IIGFAVPLYSLTKEPG 183

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
            +   I+   +ES L   + T  D   + ++ P P E ++ Y
Sbjct: 184 ALSYEIE--RIESLLQCQIETASDLLSILRYSPKPKEYLLAY 223


>gi|164424566|ref|XP_963538.2| hypothetical protein NCU06766 [Neurospora crassa OR74A]
 gi|157070568|gb|EAA34302.2| predicted protein [Neurospora crassa OR74A]
          Length = 1421

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 202/724 (27%), Positives = 317/724 (43%), Gaps = 139/724 (19%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL++ E + K+N I F    + + ++A           Q Q+   +  FL P V L
Sbjct: 71  ARAYQLEMFEASLKQNIILF----SDRVMVA-------DGHWQWQDSGRIW-FLTPTVAL 118

Query: 364 VYQQAEVIREQTGYVVG-HYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSI 421
             QQ  V++ Q   V     CG+ G D W  Q  W       +++V T QIL +   HS 
Sbjct: 119 ARQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSF 178

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQ 479
           +++++++L+++DE H+    HP + +M+E Y    K     PS+ G+TASP+    ++  
Sbjct: 179 VRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPLKSNNLAD- 237

Query: 480 VDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEY----------DKAASLWS 528
                 I  LE  LD+V  T    R+EL  HV  P  +VV Y          D       
Sbjct: 238 ------IEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFLE 291

Query: 529 LHEQL---KQMEVAVEEAAQSSSRRSKW-QFMGARDAGAKEELRQVYGVSERTESDGAAN 584
            + +L   K  +V + +A ++   R K  Q +  +D  A++ELR VY           A 
Sbjct: 292 AYHRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYN---------RAL 342

Query: 585 LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCE 644
           L+++         E+G W A                          + YL++ VS +  E
Sbjct: 343 LVRR---------EIGPWAA--------------------------DYYLTRTVSHMLAE 367

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG-KVT 703
           L                           E GE    H   G     + I A   +  +++
Sbjct: 368 L---------------------------ERGEPPAQHRYIGEALRSIPIPAISKEPIQLS 400

Query: 704 PKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGH---- 758
           PKVQ+L+K+L  +Q  +D   I+FV ERV+ ++V   +     +    ++AS+IG     
Sbjct: 401 PKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTASMIGTASVP 458

Query: 759 ---NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
               N  +M   +   ++  FR GR  LLVATSV EEG+D+  CN+VI FD    + ++I
Sbjct: 459 GKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFI 518

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRN-ARNSEETLRKEAIERTDLSHLKDTSRLIS 874
           Q RGRAR+  S   LM++  +   AT   N  R  +E    E  +  +L  L D      
Sbjct: 519 QRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELELLDDP----R 574

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIMER----HEKPG 929
           + + P  V +VESTGA +++  A   ++ +C+++ S  RY    P F++ +       PG
Sbjct: 575 IGSYP--VLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQVNPDPASPG 632

Query: 930 GPTEYSCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             T     + LP + AP     E L     +S +LA       A K L+  G   + LLP
Sbjct: 633 RRTLLQATVHLPASLAPDLRRHESLW--TWTSEKLAIMDASFQAYKALYNAGLVNENLLP 690

Query: 985 DKGS 988
            K S
Sbjct: 691 TKVS 694



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 101/238 (42%), Gaps = 66/238 (27%)

Query: 1426 PQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDG 1485
            P  HE  L++ + ++V+N+ L + +   GL  YI  +  A  +W      P F ED    
Sbjct: 908  PNHHERLLSQWKDKLVNNVRLCRASRDFGLDEYI-INSAASKKWR-----PKFVED---- 957

Query: 1486 DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGV 1545
                 D+ KS                            S+  R +SSK +ADVVE+LIG 
Sbjct: 958  ---YMDEMKSPI--------------------------SAETRQMSSKMVADVVESLIGA 988

Query: 1546 YYVEGGKDAA------------NHLMKWIGIQVESDPEEVGCPSRPAC---VPESVLRSV 1590
             Y+ GG   A            +   KW  I++          SR       P+  + S 
Sbjct: 989  AYMCGGMSKALECVALLLPTPKSSQFKWQEIEL----------SRTQLFEFAPKDAILSK 1038

Query: 1591 DFHALEDALKIKFKDRGLLVEAITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLF 1646
                LE A+   F  + LL+EA+TH S    G   SCY+RLEF+GDA+LD ++ K L 
Sbjct: 1039 QLEPLEKAMDYTFNKKSLLIEAMTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRLM 1096


>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Mycosphaerella populorum SO2202]
          Length = 1400

 Score =  185 bits (469), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 200/731 (27%), Positives = 321/731 (43%), Gaps = 122/731 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++++++ K+N I  ++TG+GKT IA+  IR+   +++R     L  FL P   L 
Sbjct: 23  RSYQTEMVDRSLKENIIVAMDTGSGKTHIAIARIRA---EVERLRDNRLVWFLAPSRTLA 79

Query: 365 YQQAEVIR-EQTGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
            QQ   +  E + Y V    G  G + W  QR W       +V++ T  +L + L H  +
Sbjct: 80  EQQYRALDLELSAYGVRLLTGADGVEKWTDQRLWDAVLTNIKVVIATPAVLKDALAHGFV 139

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNLKGVSSQV 480
            +  + L + DE H   KK P + +M  FY    +  E  P + G++ASPV         
Sbjct: 140 TISRLALCVFDEAHRCTKKAPMNQIMQLFYRPARERGEPVPHILGLSASPVT-------- 191

Query: 481 DCAIK---ICNLESKLDSVVCTIKD-RKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
             ++K   +  +ES L S+  T K  R ELEKHV +P  + + + ++      H    ++
Sbjct: 192 --SVKQGGLETIESNLHSLAVTPKTHRTELEKHVNLPELLTIRFSES------HTASNRL 243

Query: 537 EVAVEEAAQSSSRRSKWQFM---GARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             A+  AA+S        F+   G  D  +++ L+QV    E          +Q+LRA++
Sbjct: 244 CDALAVAARSYDLARDPYFVALTGQHDDRSRKILQQVQLKQE-------TYCLQQLRALD 296

Query: 594 YALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK 653
                L +                      QL     + Y+S  +             ++
Sbjct: 297 TRAARLHK----------------------QLGPSMAQWYISTCI-------------RR 321

Query: 654 DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKV------TPKVQ 707
             + + SEN F+    +E E   LL+       E V+   G AVA G V      + K +
Sbjct: 322 FRQGMSSEN-FLMPDLSEAERKHLLEIF-----EDVEQHAGPAVALGTVDDTLVISEKAR 375

Query: 708 SLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQEMR 765
            L++ILL  QH E     +IFVE+ V    L ++   +P+L    K A  +G  ++   R
Sbjct: 376 LLLQILL--QHAEPGVHCLIFVEQRVQVTALAELLRRVPALEDSYKIAGFVG-TSTNTNR 432

Query: 766 TFQMQETIA---------KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
              + + +A          FRDG   ++VAT+V EEG+DI  CN+VI FD  K +++++Q
Sbjct: 433 KISVADLVALSDQSKDLQAFRDGHKNVMVATNVLEEGIDISACNLVICFDAPKNLVSFVQ 492

Query: 817 SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV- 875
            RGRAR+  S Y L           F+    +++      A+E    +   D SR + + 
Sbjct: 493 RRGRARRTDSKYFL-----------FVSENESAKGNKPWSALEAEMKAMYMDDSRQLQLR 541

Query: 876 -DAVPGTVYQVESTGAVVSLNSAVGLIHFYC--SQLPSDRYSILRPEFIMERHEKPGGPT 932
               P  VY V STGA+++++ A+  ++ +C  S   ++ Y  LRPEF    +E     T
Sbjct: 542 PSEKPPRVYGVASTGAMMTMDDAMSHLYHFCSVSTKHANNYIDLRPEFETSLNEI---TT 598

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAV---CLAACKKLHEMGAFTDMLLP---DK 986
            +S  + LP                   ++A+    L A   LH  G   D LLP   D 
Sbjct: 599 RWSASVDLPMTVHPSVRHANSAKPWETEEEAIKDAALEAYIALHRAGLVNDNLLPLIKDY 658

Query: 987 GSGEQQEKVDQ 997
           G     E VDQ
Sbjct: 659 GPQIGVEHVDQ 669



 Score =  116 bits (290), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 186/438 (42%), Gaps = 90/438 (20%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTAASCQE 1398
            C I  LP      +  +PSI+ R+E+ LL   L +     +  +    I EA+++ +  E
Sbjct: 878  CTIDVLPAKYALFSAFVPSILYRLETSLLVRDLMETALKDIALTDHALIKEAISSPAAGE 937

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
               Y R E LGD  LK      +  ++    E  LT  R ++V N  L + AL + L  Y
Sbjct: 938  PTDYNRLEYLGDCVLKHYTELQVMSQHTDWPEAYLTLERDRIVRNSNLAKAALERELDKY 997

Query: 1459 IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
            I  + F   +W  P                                     Y  + ++D 
Sbjct: 998  ILTEPFTGRKWRPP-------------------------------------YATEHVKD- 1019

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE--SDPEEVGCP 1576
                  ++ R +S+KTLADVVEALIG  Y+EG  + A   ++ +  Q +  +D  E    
Sbjct: 1020 -----QAAKRQMSTKTLADVVEALIGAAYLEGDTEKAFQCIRVLLPQEKWSNDCFETLIA 1074

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGD 1634
               AC   +VL       LE  +   F    LLVEA TH S P+  +G+S Y+RLEF+GD
Sbjct: 1075 ELTACPVANVL------LLETLIGHTFSHPTLLVEATTHGSCPANKTGMS-YERLEFLGD 1127

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE------------------------NF 1670
            +VLD +IT  LF     L   +L  + AA VN+                         N+
Sbjct: 1128 SVLDMIITPKLFSHPRKLKHWQLHSVHAALVNSHLLGYCCLRYYINQEMFDIVQTTSGNY 1187

Query: 1671 ARVAVKHKLHVH--LRHGSSA--LDRQIRDFVKEV---LEELLKPG--FNSFGLGDCKAP 1721
              V+ + K H++  +R G+    +  Q  +   E    +E+ L  G  +    L     P
Sbjct: 1188 DSVSARRKTHLYEFMRAGAQVNNITCQAVEHFHECSSQIEKALAHGIEYPWVELVTLSPP 1247

Query: 1722 KVLGDIVESIAGAIFLDS 1739
            K   D+VESI GAIF+D+
Sbjct: 1248 KFFCDLVESILGAIFIDT 1265



 Score = 56.6 bits (135), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 25/167 (14%)

Query: 1595 LEDALK-IKFKDRGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITKHLFFSYTNL 1652
            +E ALK I   D  L+ EAI   S P++G    Y RLE++GD VL H     +   +T+ 
Sbjct: 911  METALKDIALTDHALIKEAI---SSPAAGEPTDYNRLEYLGDCVLKHYTELQVMSQHTDW 967

Query: 1653 PPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS 1712
            P   LT  R   V N N A+ A++ +           LD+ I    +       +P + +
Sbjct: 968  PEAYLTLERDRIVRNSNLAKAALERE-----------LDKYI--LTEPFTGRKWRPPYAT 1014

Query: 1713 FGLGDCKA-----PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
              + D  A      K L D+VE++ GA +L+   DT   +Q  + LL
Sbjct: 1015 EHVKDQAAKRQMSTKTLADVVEALIGAAYLEG--DTEKAFQCIRVLL 1059


>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
          Length = 1610

 Score =  185 bits (469), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 181/621 (29%), Positives = 281/621 (45%), Gaps = 93/621 (14%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ-------NKKMLAV 355
           + R YQ ++ ++AK+ NTI  ++TGAGKTL+AV+LI      L+R+       ++K+L +
Sbjct: 94  RVRQYQHELFQKAKQSNTIIRMKTGAGKTLVAVMLILYEAARLRREMMVQERPSRKLLCM 153

Query: 356 FLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            LVP V LV QQ   IREQT   V  + G+M    WD + WQ EFD   V+VMT QILLN
Sbjct: 154 -LVPTVTLVNQQVAAIREQTSLQVRGFRGDMLVSAWDLRTWQIEFDLADVVVMTPQILLN 212

Query: 416 ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG 475
           +LR +  ++E I L                L+  E +H   K     +      P+  K 
Sbjct: 213 VLRSAFWRIENIAL----------------LIFDEAHHARKKHPYAHILDEFYHPLKRKL 256

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIKDR----KELEKHVPMPSEVVVEYDKAASLWSLHE 531
             S+ + + ++  +     S V T  D      +LE+ +      +VE  + A+      
Sbjct: 257 ARSEAEMSDRLPRILGLTASPVWTASDLVSAISDLERRM---DATLVEVKEHAA------ 307

Query: 532 QLKQMEVAVEEAAQSSSRRSKWQFMGARD-AGAKEELRQVYGVSERTESDGAANLI---- 586
                     E AQ + + S+       D AG K           R ES   A+L+    
Sbjct: 308 ----------ELAQYNRKPSERCLTYRLDRAGIKTPFEI------RLESSSIASLLDLKF 351

Query: 587 -QKLRAINYALGELGQWCAYKVAQSFLTAL-QNDERANYQLDVKFQESYLSKVVSLLQCE 644
            Q++  +   LG LG      + ++   AL ++   A  ++D   QE +      LL   
Sbjct: 352 WQRIDQVKERLGLLG--VDIYICEALAQALARSTSDAAVKIDYVPQEYW--NEACLLHSS 407

Query: 645 LVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTP 704
            V+          V       E G   I      DS   +   H+     ++    +   
Sbjct: 408 FVD----------VLEHTTLTESGKRHIS-----DSPSTAWYGHLASADSSSSDISQ--- 449

Query: 705 KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE- 763
           KV+ L+  L  Y+  +DF AIIFV+      VL ++ ++   L F+ +  L+G       
Sbjct: 450 KVRILLDHLETYRACKDFTAIIFVQTRYQTAVLQRIVSKAAWLDFLSTNYLVGSTTGNPA 509

Query: 764 ------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                 MR  Q  + +   R+GR   L ATSVAEEGLD+  CN+++RFD   T++ YIQS
Sbjct: 510 DMAKGVMRPKQQLKPVQSIREGRCNTLFATSVAEEGLDLSSCNLIVRFDPVSTLVGYIQS 569

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA 877
           RGRAR   SDY+++ E  + S     +    SE+ +     +R D+    + S   +V A
Sbjct: 570 RGRARAVNSDYLVLAE-ADTSEEYDWQTLTASEQQMLDHTGQR-DIFEEGELSNGETVSA 627

Query: 878 VPGTVYQVESTGAVVSLNSAV 898
            P   Y V S+GA+++L+S+V
Sbjct: 628 TP--TYLVPSSGALLTLSSSV 646



 Score =  144 bits (363), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 200/454 (44%), Gaps = 58/454 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLA-IQLKDKINYPVPASKILEALTAAS 1395
            +P  +CF   L  +  +     P+ +R +   L A   ++D    P+   +++EALT   
Sbjct: 1022 VPASMCFSSRLSAADWKIVMLAPAFLRNIGDCLQARAAIRDLRLPPIAMHRMIEALTLPG 1081

Query: 1396 CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
                  YE  E LGD+ LK + S  L+L YP K EG LT +R   V N+ L+  A+   L
Sbjct: 1082 SAVGRSYESIETLGDSVLKVLTSVHLYLAYPLKSEGALTCLRTNSVENVYLHHKAVESSL 1141

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
              Y+  +R   + W     LP      +D + S                         DM
Sbjct: 1142 GKYLIHERMRLNTW-----LP------RDAEHSA------------------------DM 1166

Query: 1516 EDG-ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
             DG E E      R +  + L+D +E+++G  Y+ GG   A    +   +     P   G
Sbjct: 1167 GDGCEFE------RKIQRRALSDCIESILGAAYLTGGLSMAMDTARAFNL-----PLGDG 1215

Query: 1575 CPSRPACV-PESVLRSVD--FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEF 1631
               R   +      RSV      LED +   F +   L++A+TH S  S     Y+R EF
Sbjct: 1216 ASWRSRSIEARRRERSVSPRIGELEDLVGYSFSNNDCLIQALTHRSYLSPTTPSYEREEF 1275

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA-VKHKLHVHLRHGSSAL 1690
            +GDA+LD      L+  +  + P +L+ LRA  V N     VA ++ +L  ++ H +   
Sbjct: 1276 LGDAMLDFWAITRLYARFDGITPQQLSRLRALLVCNGTLGYVAMLRLRLGEYVLHNADEF 1335

Query: 1691 DRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
              Q+   + +   E + P      +     PKVLGD VE+IAGAIF+DSG D  +V++ F
Sbjct: 1336 TDQLE--IAQQQAEAMPPAEFCEQVWFWDPPKVLGDCVEAIAGAIFVDSGGDPELVFKYF 1393

Query: 1751 QPLLDPM---VTPETLPMHPVRELQERCQQQAEG 1781
              +L P+   ++P  +P  PV  L    Q+   G
Sbjct: 1394 DRILGPLMQYISP-NMPADPVSRLAHLKQELRAG 1426


>gi|449459586|ref|XP_004147527.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
          Length = 353

 Score =  185 bits (469), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 186/339 (54%), Gaps = 18/339 (5%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L  KFK++ LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y +L  
Sbjct: 24   IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 81

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV-LEELLKPGFNSF 1713
            G+LT LRAA V+ E  ARVAV H+L+ ++R  +  LD  +R+F   V LE+   P    +
Sbjct: 82   GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP----Y 137

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPKVL DIVES+AGAI++D   D   +W + +  L P+ TPE L     PV  L
Sbjct: 138  G-GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLKADPQPVTLL 196

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E CQ++ + +  +    G+    +VY+D   V    + QK +A+  AAR AL +L +  
Sbjct: 197  FEDCQKKGKQVHIENQEKGSTYVAKVYVDRRLVASGSSKQKPIARLNAAREALIILSDST 256

Query: 1832 TAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYA 1889
              + K     +G    +G+      +Q L+D C R+ W  P Y     G P H +RF   
Sbjct: 257  DTKIKRVVTIDG---IDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGHP-HGRRFVCC 312

Query: 1890 VRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            V+++T +   T   +G+    VK+A++SAA L++  L K
Sbjct: 313  VKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 349



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 40/173 (23%)

Query: 1378 INYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            ++Y     K+LE ALT +S   +  Y+R E +GD+ +   +S + F  YP  ++GQLT +
Sbjct: 28   LSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPLYPDLNQGQLTLL 87

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSV 1496
            R   VS   L + A+   L SY++                    +  D D ++ +   +V
Sbjct: 88   RAANVSTEKLARVAVLHRLYSYVR-------------------RNADDLDDNVREFADAV 128

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            A             ED+ +  G L        V + K LAD+VE++ G  YV+
Sbjct: 129  A------------LEDNSIPYGGL--------VKAPKVLADIVESVAGAIYVD 161


>gi|449526605|ref|XP_004170304.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
          Length = 339

 Score =  185 bits (469), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 186/339 (54%), Gaps = 18/339 (5%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L  KFK++ LL EA+TH+S  +S    Y RLEF+GD+ +   I+ + F  Y +L  
Sbjct: 10   IERILSYKFKNKKLLEEALTHSSYLNS--PSYDRLEFIGDSAIGLAISTYFFPLYPDLNQ 67

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV-LEELLKPGFNSF 1713
            G+LT LRAA V+ E  ARVAV H+L+ ++R  +  LD  +R+F   V LE+   P    +
Sbjct: 68   GQLTLLRAANVSTEKLARVAVLHRLYSYVRRNADDLDDNVREFADAVALEDNSIP----Y 123

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPKVL DIVES+AGAI++D   D   +W + +  L P+ TPE L     PV  L
Sbjct: 124  G-GLVKAPKVLADIVESVAGAIYVDVEFDLQKLWAIIKDFLKPIYTPEDLEADPQPVTLL 182

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E CQ++ + +  +    G+    +VY+D   V    + QK +A+  AAR AL +L +  
Sbjct: 183  FEDCQKKGKQVHIENQEKGSTYVAKVYVDRRLVASGSSKQKPIARLNAAREALIILSDST 242

Query: 1832 TAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYA 1889
              + K     +G    +G+      +Q L+D C R+ W  P Y     G P H +RF   
Sbjct: 243  DTKIKRVVTIDG---IDGSFEIEGAKQKLHDFCCRKKWQSPSYSKEVLGHP-HGRRFVCC 298

Query: 1890 VRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            V+++T +   T   +G+    VK+A++SAA L++  L K
Sbjct: 299  VKISTFND--THSIIGDEKSRVKEAENSAASLMIRDLQK 335



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 50/185 (27%)

Query: 1376 DKINYPVPASKIL-----------EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
            DK N   P  +IL           EALT +S   +  Y+R E +GD+ +   +S + F  
Sbjct: 2    DKRNSMTPIERILSYKFKNKKLLEEALTHSSYLNSPSYDRLEFIGDSAIGLAISTYFFPL 61

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
            YP  ++GQLT +R   VS   L + A+   L SY++                    +  D
Sbjct: 62   YPDLNQGQLTLLRAANVSTEKLARVAVLHRLYSYVR-------------------RNADD 102

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
             D ++ +   +VA             ED+ +  G L        V + K LAD+VE++ G
Sbjct: 103  LDDNVREFADAVA------------LEDNSIPYGGL--------VKAPKVLADIVESVAG 142

Query: 1545 VYYVE 1549
              YV+
Sbjct: 143  AIYVD 147


>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
 gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
          Length = 1658

 Score =  184 bits (468), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 224/445 (50%), Gaps = 47/445 (10%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            LL +   + +N  +    I++ALT  S  + F  ER ELLGDA+LK+ +S +L   + + 
Sbjct: 1157 LLQLTPANTVNVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEW 1216

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDS 1487
            HEG LT ++ Q+VSN  L   A+  GL   ++  +F P   W  P  L    ++ K    
Sbjct: 1217 HEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPP--LATVPKNIKRTMQ 1274

Query: 1488 SLFDQEK-----SVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---------SYRVLSSK 1533
            S+    +     ++ E+++ T     +  DD +   EL G+           S + +  K
Sbjct: 1275 SVNHSARVLYRLTLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDK 1334

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI-------------QVESDPEEVGCPSRPA 1580
            T AD +EAL+GV     G + +  L+   GI             ++E+   +     R  
Sbjct: 1335 TPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLKLLADKIENQRLKTHIDIREV 1394

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
               ++ L+  ++  +E  L  KFKDR  L++A+THAS P++ ++  YQ+LEF+GDAVLD 
Sbjct: 1395 ---DAFLK--NYRRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDF 1449

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV- 1698
            LI+ ++F     + PG+LTDLR+A VNN   A + V+H LH+++   S++    +  FV 
Sbjct: 1450 LISMYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVL 1509

Query: 1699 ------KEVLEE--LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                   E+ ++  LL    +         PK LGD+ ES+  A+FLDSG D +  WQV 
Sbjct: 1510 FQEQNKHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVI 1569

Query: 1751 QPLL--DPMVTPETLPMHPVRELQE 1773
              ++  + +   E  P+  VR+L E
Sbjct: 1570 YGMMGNEILTFTENTPIQIVRQLYE 1594



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 10/230 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP++     R YQ  +     +KNTI +L TGAGKT IA+++I+ +  DL +   +    
Sbjct: 5   MPQQDDFIPRDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSVKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEY 520
           K + S    + ++  LE+  ++ + T+       E+ K    P+E++V Y
Sbjct: 183 KQIKSVALVSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSY 232



 Score = 97.8 bits (242), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 31/301 (10%)

Query: 705 KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
           KV+ LI  L K Y+   D +A  +IFV+R  +A VL  +    FAE    + +    ++G
Sbjct: 361 KVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLKIYFAETEDANLIVPDFMVG 420

Query: 758 HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
           +N S      Q+      +  + +F+     ++V T+V EEG+D++ CN V+++D  +T 
Sbjct: 421 NNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCNTVVKYDHPQTF 480

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
            +Y QS+GRAR   S Y++M++  N     FL   R   + EE LR+    + I R D  
Sbjct: 481 ASYQQSKGRARMKNSQYMVMLDNEN--RHIFLEKYRLYKSIEEELRRCLIGKTINRPDPL 538

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
              D  + +  + +P       + GA +   SA+ L++ YC  +P D ++        ER
Sbjct: 539 D-ADVHKELYNEIIPPF---FTAKGAKLDALSAIQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925 HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            +   G      ++ LP  +   EK+ G    +++LA+++    AC+KL+E     + L+
Sbjct: 593 IDLKDG--RIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKELNEHLI 650

Query: 984 P 984
           P
Sbjct: 651 P 651



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 12/123 (9%)

Query: 1250 YVESIRYE-MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            YV ++ +E +T ES FP  E       Y SYA+Y+ Q Y + ++   Q LI  +G++   
Sbjct: 878  YVVTMVHEHLTPESPFPNPE-------YGSYANYFSQAYHLAVVKPDQFLIEVKGITSYL 930

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L+P      E +G+        +   L PELC  +  P      A  LPS + R+  +
Sbjct: 931  NRLNP----GVEDDGKSTRSKHWRFNEILIPELCHNYQFPADYWLKATLLPSALHRLHYL 986

Query: 1369 LLA 1371
            LLA
Sbjct: 987  LLA 989


>gi|125555283|gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
          Length = 276

 Score =  184 bits (468), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/242 (47%), Positives = 150/242 (61%), Gaps = 15/242 (6%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHAS-----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            A+E  L  +F+D+ L+ +A+TH S     RP  GV+ Y+RLE++GDAVL  ++++ +F +
Sbjct: 41   AVESLLGYEFRDKALVEQALTHGSFYYPYRP--GVT-YERLEYLGDAVLTCVVSREVFLT 97

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            Y  L PG LT LRAA V+ E  ARVAV H LH  LRH +  LD QI DF+    EEL   
Sbjct: 98   YGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFI----EELSMY 153

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPV 1768
              +S GL D   PKVL D+VES+ GAI+ DS  +  +VWQVFQ L DP+++ ETL  HPV
Sbjct: 154  PIHSNGLLD--PPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPV 211

Query: 1769 RELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNALAVL 1827
             EL E CQ+   G++          TVEV IDG  VG A   QKK +AQ  AA+ AL  L
Sbjct: 212  SELFEFCQKTRRGVKIVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDKL 271

Query: 1828 KE 1829
            KE
Sbjct: 272  KE 273



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 88/216 (40%), Gaps = 56/216 (25%)

Query: 1359 PSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETF----CYERAELLGDAYLK 1414
            P  +  VES LL  + +DK       + + +ALT  S    +     YER E LGDA L 
Sbjct: 36   PGEVAAVES-LLGYEFRDK-------ALVEQALTHGSFYYPYRPGVTYERLEYLGDAVLT 87

Query: 1415 WVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
             VVSR +FL Y Q   G LTR+R   V    L + A+  GL  ++        R  AP +
Sbjct: 88   CVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFL--------RHKAPNL 139

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
                     DG  + F +E S+          Y  + +  ++                K 
Sbjct: 140  ---------DGQITDFIEELSM----------YPIHSNGLLD--------------PPKV 166

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            L DVVE+LIG  Y +      N  + W   Q  +DP
Sbjct: 167  LCDVVESLIGAIYCDSN---FNQEIVWQVFQKLADP 199


>gi|161783812|sp|Q7SCC1.3|DCL2_NEUCR RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease dcl-2; Includes: RecName:
           Full=ATP-dependent helicase dcl-2
 gi|18376024|emb|CAB91758.2| related to RNA helicase/RNAseIII CAF [Neurospora crassa]
          Length = 1540

 Score =  184 bits (467), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 203/726 (27%), Positives = 317/726 (43%), Gaps = 141/726 (19%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKKMLAVFLVPKV 361
           AR YQL++ E + K+N I           +A+   R +  D   Q Q+   +  FL P V
Sbjct: 71  ARAYQLEMFEASLKQNII-----------VALFSDRVMVADGHWQWQDSGRIW-FLTPTV 118

Query: 362 PLVYQQAEVIREQTGYVVG-HYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRH 419
            L  QQ  V++ Q   V     CG+ G D W  Q  W       +++V T QIL +   H
Sbjct: 119 ALARQQHRVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAH 178

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVS 477
           S +++++++L+++DE H+    HP + +M+E Y    K     PS+ G+TASP+    ++
Sbjct: 179 SFVRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPLKSNNLA 238

Query: 478 SQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEY----------DKAASL 526
                   I  LE  LD+V  T    R+EL  HV  P  +VV Y          D     
Sbjct: 239 D-------IEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRF 291

Query: 527 WSLHEQL---KQMEVAVEEAAQSSSRRSKW-QFMGARDAGAKEELRQVYGVSERTESDGA 582
              + +L   K  +V + +A ++   R K  Q +  +D  A++ELR VY           
Sbjct: 292 LEAYHRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYN---------R 342

Query: 583 ANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQ 642
           A L+++         E+G W A                          + YL++ VS + 
Sbjct: 343 ALLVRR---------EIGPWAA--------------------------DYYLTRTVSHML 367

Query: 643 CELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG-K 701
            EL                           E GE    H   G     + I A   +  +
Sbjct: 368 AEL---------------------------ERGEPPAQHRYIGEALRSIPIPAISKEPIQ 400

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGH-- 758
           ++PKVQ+L+K+L  +Q  +D   I+FV ERV+ ++V   +     +    ++AS+IG   
Sbjct: 401 LSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTASMIGTAS 458

Query: 759 -----NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                 N  +M   +   ++  FR GR  LLVATSV EEG+D+  CN+VI FD    + +
Sbjct: 459 VPGKARNHMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKS 518

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRN-ARNSEETLRKEAIERTDLSHLKDTSRL 872
           +IQ RGRAR+  S   LM++  +   AT   N  R  +E    E  +  +L  L D    
Sbjct: 519 FIQRRGRAREVSSTLYLMVQNASSESATDWHNLERLMKERYEDEMRQNAELELLDDP--- 575

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIMER----HEK 927
             + + P  V +VESTGA +++  A   ++ +C+++ S  RY    P F++ +       
Sbjct: 576 -RIGSYP--VLEVESTGARMTIRDARSHLNHFCAKVSSRSRYLQKEPYFVIRQVNPDPAS 632

Query: 928 PGGPTEYSCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           PG  T     + LP + AP     E L     +S +LA       A K L+  G   + L
Sbjct: 633 PGRRTLLQATVHLPASLAPDLRRHESLW--TWTSEKLAIMDASFQAYKALYNAGLVNENL 690

Query: 983 LPDKGS 988
           LP K S
Sbjct: 691 LPTKVS 696



 Score = 89.0 bits (219), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 142/336 (42%), Gaps = 63/336 (18%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK-DKI------NYPVP 1383
            K Y   LP     +   P    +    +P+  R VE  L+A  L  +++      N P+ 
Sbjct: 923  KLYRKVLPSTQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLPL- 981

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKW---VVSRFLFLKY---PQKHEGQLTRMR 1437
               I  AL ++  +    YER E +GD  LK+   + +  L   +   P  HE  L++ +
Sbjct: 982  ---ITTALISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWK 1038

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVA 1497
             ++V+N+ L + +   GL  YI  +  A  +W      P F ED         D+ KS  
Sbjct: 1039 DKLVNNVRLCRASRDFGLDEYI-INSAASKKWR-----PKFVED-------YMDEMKSPI 1085

Query: 1498 EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANH 1557
                                      S+  R +SSK +ADVVE+LIG  Y+ GG   A  
Sbjct: 1086 --------------------------SAETRQMSSKMVADVVESLIGAAYMCGGMSKALE 1119

Query: 1558 LMKWI-----GIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
             +  +       Q +    E+         P+  + S     LE A+   F  + LL+EA
Sbjct: 1120 CVALLLPTPKSSQFKWQEIELSRTQLFEFAPKDAILSKQLEPLEKAMDYTFNKKSLLIEA 1179

Query: 1613 ITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLF 1646
            +TH S    G   SCY+RLEF+GDA+LD ++ K L 
Sbjct: 1180 MTHPSCAGLGTNESCYERLEFLGDAILDVIVVKRLM 1215


>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
          Length = 1658

 Score =  184 bits (467), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 224/445 (50%), Gaps = 47/445 (10%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            LL +   + +N  +    I++ALT  S  + F  ER ELLGDA+LK+ +S +L   + + 
Sbjct: 1157 LLQLTPANTVNVNLQQKNIIKALTTKSSSDVFDLERYELLGDAFLKFSISLYLVKYHKEW 1216

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDS 1487
            HEG LT ++ Q+VSN  L   A+  GL   ++  +F P   W  P  L    ++ K    
Sbjct: 1217 HEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKIHKFDPKNDWQPP--LATVPKNIKRTMQ 1274

Query: 1488 SLFDQEK-----SVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---------SYRVLSSK 1533
            S+    +     ++ E+++ T     +  DD +   EL G+           S + +  K
Sbjct: 1275 SVNHSARVLYRLTLTEEEIKTGVVTAKNSDDFIAQLELHGNMPDPSPMANYLSQQTMGDK 1334

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGI-------------QVESDPEEVGCPSRPA 1580
            T AD +EAL+GV     G + +  L+   GI             ++E+   +     R  
Sbjct: 1335 TPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLRLLADKIENQRLKTHIDIREV 1394

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDH 1639
               ++ L+  ++  +E  L  KFKDR  L++A+THAS P++ ++  YQ+LEF+GDAVLD 
Sbjct: 1395 ---DAFLK--NYRRIEGILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDF 1449

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV- 1698
            LI+ ++F     + PG+LTDLR+A VNN   A + V+H LH+++   S++    +  FV 
Sbjct: 1450 LISMYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAESASFTDTVSKFVL 1509

Query: 1699 ------KEVLEE--LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
                   E+ ++  LL    +         PK LGD+ ES+  A+FLDSG D +  WQV 
Sbjct: 1510 FQEQHKHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAATWQVI 1569

Query: 1751 QPLL--DPMVTPETLPMHPVRELQE 1773
              ++  + +   E  P+  VR+L E
Sbjct: 1570 YGMMGNEILTFTENTPIQIVRQLYE 1594



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 10/230 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP++     R YQ  +     +KNTI +L TGAGKT IA+++I+ +  DL +   +    
Sbjct: 5   MPQQDDFIPRDYQRTMKTICMQKNTIIYLPTGAGKTHIALMVIKEMGKDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSHNLTYDTSIYTSDRNVDAWKQDKWLEEFAKYQVIVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSVKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEY 520
           K + S    + ++  LE+  ++ + T+       E+ K    P+E++V Y
Sbjct: 183 KQIKSVALVSPELERLENTFNATIATVGSYDAFTEVCKFSTDPNELLVSY 232



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 148/301 (49%), Gaps = 31/301 (10%)

Query: 705 KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
           KV+ LI  L K Y+   D +A  +IFV+R  +A VL  +    FAE    + +    ++G
Sbjct: 361 KVRQLIDQLEKLYEENRDKKAKTLIFVQRRFSAKVLYHLLKIYFAETEDANLIVPDFMVG 420

Query: 758 HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
           +N S      Q+      +  + +F+     ++V T+V EEG+D++ CN V+++D  +T 
Sbjct: 421 NNGSMPESIEQILSAKKDRRVLERFKKNETNVIVTTNVLEEGIDLQMCNTVVKYDHPQTF 480

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
            +Y QS+GRAR   S Y++M++  N     FL   R   + EE LR+    + I R D  
Sbjct: 481 ASYQQSKGRARMKNSQYMVMLDNEN--RHIFLEKYRLYKSIEEELRRCLIGKTINRPDPL 538

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
              D  + +  + +P       + GA +   SA+ L++ YC  +P D ++        ER
Sbjct: 539 D-ADVHKELYNEIIPPF---FTAKGAKLDALSAIQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925 HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            +   G      ++ LP  +   EK+ G    +++LA+++    AC+KL+E     + L+
Sbjct: 593 IDLKDG--RIIVEVLLPLQSTVREKISGNPMRNIKLAKRSAAFNACRKLYENKELNEHLI 650

Query: 984 P 984
           P
Sbjct: 651 P 651



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 12/123 (9%)

Query: 1250 YVESIRYE-MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            YV ++ +E +T ES FP  E       Y SYA+Y+ Q Y + ++   Q LI  +G++   
Sbjct: 878  YVVTMVHEHLTPESPFPNPE-------YGSYANYFSQAYHLAVVKPDQFLIEVKGITSYL 930

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L+P      E +G+        +   L PELC  +  P      A  LPS + R+  +
Sbjct: 931  NRLNP----GVEDDGKSTRSKHWRFNEILIPELCHNYQFPADYWLKATLLPSALHRLHYL 986

Query: 1369 LLA 1371
            LLA
Sbjct: 987  LLA 989


>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
 gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease dcl2; Includes: RecName:
           Full=ATP-dependent helicase dcl2
 gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
          Length = 1389

 Score =  183 bits (465), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 197/716 (27%), Positives = 319/716 (44%), Gaps = 114/716 (15%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           QAR YQL++LE + K+N I  ++TG+GKT IAVL I++   +L       +  FL P V 
Sbjct: 15  QARNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKA---ELDSCPPDKIIWFLAPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ +VI      V       + + + W  Q  W       +V+V T  +L + L H 
Sbjct: 72  LCTQQHKVIASNLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVSTYAVLADALSHG 131

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VFGMTASPVNLKGV 476
            ++M  + L+I DE HH ++KH  + +M +FYH T  +  PS    + G+TASPV    V
Sbjct: 132 FMRMSRLALIIFDEAHHCMRKHAANKIMQDFYHPTVSKFGPSAVPRIMGLTASPV----V 187

Query: 477 SSQVDCAIKICNLESKLDSVVCTIK-DRKELEK--HVPMPSEVVVEYDKAASLWSLHEQL 533
            S  +   ++  +E+ LD+V  T +  R+EL K  H P   +++ E      L    + L
Sbjct: 188 RSNRE---ELFTIETNLDAVCKTPRAHRQELLKFSHRPELKQLLYEPPDPMGLQVSSQTL 244

Query: 534 KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY---GVSERTESDGAANLIQKLR 590
           +    A+ EA         W+ +   D    + LR+     G  E+    G     ++L+
Sbjct: 245 R----ALIEA---------WETLDIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLK 291

Query: 591 AI----NYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
                  +   ELG+W A Y +     T++Q+       L  + Q SY++          
Sbjct: 292 RFVDRSRHIFEELGEWAADYYI----YTSIQH-------LKTRVQTSYMT---------- 330

Query: 646 VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPK 705
                                G  +E E   L+          + + +  A A  +++PK
Sbjct: 331 ---------------------GDWDEAERAYLVSFLSKLPAADIQITLSDA-ACLRISPK 368

Query: 706 VQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQEM 764
           +++LI  L      E F  +IFV++     V+  + A  P +    +SA+ +G +NS   
Sbjct: 369 LEALIGFLDAMDDPE-FSGLIFVKQRATVSVMTDLLAVHPRTRERFRSAAYVGWSNSSGS 427

Query: 765 RTF-----QMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
           + F      M     T+  FR G   L++AT V EEG+DI  C+VV+ +D    + +++Q
Sbjct: 428 KDFLGNLLSMHGQLSTLDDFRSGHKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQ 487

Query: 817 SRGRARKPGSDYILMI--ERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSRL 872
            RGRAR+  S Y +M   E      A +        +TL +  IE  + D  HL+    L
Sbjct: 488 RRGRARQKQSTYAIMFPAEDSAFDLAKW--------QTLEQAMIEAYQDDERHLQSAIEL 539

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER---HEKPG 929
             V+      + VEST AV++ ++A+  +H +C+ LPS  Y  +RP F +E    + + G
Sbjct: 540 ERVNEEVVERFTVESTSAVLTADTAMAHLHHFCAVLPSQPYVDMRPVFSVETDIANLRRG 599

Query: 930 GPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                +C      +    + EG     + R A +     A K L+E G   D LLP
Sbjct: 600 IVILPNC-----VHPKVRRSEGQRWWRTERAAMKEAAFQAYKSLYEFGLVNDNLLP 650



 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 210/486 (43%), Gaps = 92/486 (18%)

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            P  R R + + + L + + E+ +E   +  E ++K   V    + C I  LP S      
Sbjct: 851  PFPRRRNLLHRQTLATKKLENDKE---DTPEPVNKMRTV--AADQCTIDRLPFSNAILGL 905

Query: 1357 RLPSIMRRVESMLLAIQLKDKINYPV---PASKILEALTAASCQETFCYERAELLGDAYL 1413
             +  +++++E+ L+A +L + I   V       I+ A++A S Q    Y+R E LGD+ L
Sbjct: 906  FISVVVQQLETELIATKLYETILRDVGFTSTQHIITAISAPSAQALTNYQRYEFLGDSIL 965

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K+ VS  LF K+P  HEG L+  R ++V N  L + AL  GL +++    F P +W+AP 
Sbjct: 966  KFSVSCQLFFKHPNWHEGYLSEGRDEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAPL 1025

Query: 1474 VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSK 1533
            +                                            E     +  R +SSK
Sbjct: 1026 I-------------------------------------------SERLERVAGKRQVSSK 1042

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFH 1593
             LADVVEALIG  Y++GG  AA   ++    ++     +    SR +  PE   +++   
Sbjct: 1043 VLADVVEALIGAAYMDGGHAAAQACIRRFLPEINLHSLDTRTLSR-SVAPEGARQTIH-D 1100

Query: 1594 ALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
             L+  +   F++  LLVEA+TH S    +    YQRLEF+GDAVLD +I   +F     +
Sbjct: 1101 RLKRHISYTFENESLLVEALTHPSCDYDASTQSYQRLEFLGDAVLDMIIVSAIFNHPVQM 1160

Query: 1653 PPGRLTDLRAAAVNNENFA-----------RVAVKHKLHVHL------------------ 1683
            P G +T ++ A VN    A           R +V+    +                    
Sbjct: 1161 PQGHMTKIKHALVNANLLAFLCMEFAIPEERASVEQISTLQFEVISNEELVELWRFMRYR 1220

Query: 1684 -------RHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIF 1736
                   R  S A  R +RD +   L+    P +    L    A K   DI+ESI GAIF
Sbjct: 1221 GLDLNNARDASLARHRALRDEILHSLQH--DPHYPWQALSRLSADKFFSDIMESILGAIF 1278

Query: 1737 LDSGRD 1742
            +DSG D
Sbjct: 1279 VDSGGD 1284


>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
          Length = 1719

 Score =  183 bits (465), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 177/732 (24%), Positives = 308/732 (42%), Gaps = 124/732 (16%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQL +++   K N I +L TG+GKT +A+L ++    D+ +  +N    A+F+   V 
Sbjct: 2   RSYQLRLVDHLTKHNGIVYLPTGSGKTFVALLTLKRFSQDMDKRLENGGKRALFMCNTVE 61

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++  T   VG Y GE G D W   +W  E    QVLV TAQ+ L++     +
Sbjct: 62  LARQQTVAVQRLTNLTVGFYVGEQGVDDWTRGQWSDEIQDHQVLVGTAQVFLDMFTQKHM 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            + +++++I+DECHH    HPY   M  F         P V G+T   +    +   V  
Sbjct: 122 TLSSVSVVIMDECHHGTGHHPYHEFMRLFLCAEKNINLPRVVGLTGVLIKGNEIKQVVK- 180

Query: 483 AIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHEQ------- 532
             K+  LE      + T+ D +E+E    +   P E ++ Y     ++ + +        
Sbjct: 181 --KLKELEITYRGNIITVSDTEEMENVMLYSTKPKEYLITYPSQERVFMVTQSIQSQIQQ 238

Query: 533 ----LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
               L  M++ V+   +S S + +      RD   K  ++Q++                 
Sbjct: 239 FFVTLDLMDIGVQPVRRSKSLQCQ------RDPQKKSSVKQLFN---------------- 276

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
                + L E G + A     S +       R    L +K     L    ++  CE +  
Sbjct: 277 --DFLFQLQEYGIYAASIAIISLIVEFDLKRRQAETLSLK-----LMHRTAMSLCEKIRH 329

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
            + +K   + D ++   +    E                  +VI+  +      TPKVQ 
Sbjct: 330 LLVQKLRDMTDEDDDPDDKVNTE------------------EVILSFS------TPKVQR 365

Query: 709 LIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS-LIGHN 759
            ++ L      +  +D   ++FVER      +  L+L       P L  V +   ++G N
Sbjct: 366 FLQYLKTTFANKDPKDICCLVFVERRYTCKCIYGLLL-NFIDSTPELRNVLTPQFMVGRN 424

Query: 760 N-SQEMRTF----QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
             SQ+  +       +  I +FRDG   L++ +SV EEG+D++ CN V+  D  KT   Y
Sbjct: 425 TISQDFESVIERKHQKSAIQQFRDGNANLMICSSVLEEGIDVQACNYVLILDPLKTFNMY 484

Query: 815 IQSRGRARKPGSDYILM---IERGNLSHATFLRNARNSE--ETLRKEAIERTD------L 863
           +Q++GRAR   + ++L    ++RG +S         ++E  E L+   +ERT+       
Sbjct: 485 VQTKGRARSNNASFVLFSSELDRGKISQQIAQYRTAHAEIAEYLKLRVLERTEPEMYEVK 544

Query: 864 SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME 923
            H +D  +             +   GAV+  +SA+ L+H YC  +P+D +  + P +I  
Sbjct: 545 QHFQDVIQPF-----------INEHGAVLLPSSALILLHRYCQSMPTDAFGFVIP-WINS 592

Query: 924 RHEKPGGPTEYSC-------KLQLPCNAPFEKLEGPVCS----SMRLAQQAVCLAACKKL 972
             E         C        ++LP N+   KL+  + S    +++ A+ +     CK L
Sbjct: 593 LQEDTRKILFGDCARSKEVVSIKLPLNS---KLKDTIYSDPMDNVKAAKISAAFKTCKLL 649

Query: 973 HEMGAFTDMLLP 984
           +++G   +  LP
Sbjct: 650 YQLGELNERFLP 661



 Score =  158 bits (399), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 221/478 (46%), Gaps = 88/478 (18%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P    + L A+T++S  + F  ER E+LGD++LK   + +L  KY   +EG LT+++ ++
Sbjct: 1185 PAEQCEFLAAITSSSTADVFDMERLEILGDSFLKLSATLYLANKYSDWNEGTLTQVKSKL 1244

Query: 1441 VSNLVLYQYALS-KGLQSYIQADRFAPS-RWAAP------GVLPVFDED----TKDGDSS 1488
            VSN  L  Y LS   +   I    F P   W  P       VL ++ E     +  G  +
Sbjct: 1245 VSNRNLL-YCLSDTDIPKKISTILFTPRYTWLPPSISLPHNVLALWREKPELASMVGPHN 1303

Query: 1489 LFD----QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR----------VLSSKT 1534
            L D    +E+S+      +D NYN + +    + +     + +            ++ K 
Sbjct: 1304 LRDLALGEEESLVRG-YCSDINYNSFVEGCRANAQSHHAGADFSAEVNFCVGLVTIADKV 1362

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGI--------QVESDPEEVGCPSRPACVPESV 1586
            +AD +EAL+GV     G   A  ++++  I          +    E+G     A V  + 
Sbjct: 1363 IADTLEALLGVIVKNYGLQHAFRMLEYFKICRADIGKPLTQLLDLELGGSKMRANVNTTE 1422

Query: 1587 LRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITK 1643
            +    ++ H LE+ L   FKDRG L++A+TH S P++ ++ CYQ LEF+GDA+LD LI+ 
Sbjct: 1423 IDGFLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNRITGCYQELEFIGDAILDFLISA 1482

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDF------ 1697
            ++F + T + PG LTDLR+A VNN   A + V+H+LH  +   ++ L   I  F      
Sbjct: 1483 YIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLAESIAKFVQFQES 1542

Query: 1698 --------VKEVLEE---------------------LLK----------PGFNSFGLG-D 1717
                    V+ +LEE                      LK          P    F +  +
Sbjct: 1543 QRHRVTNHVRILLEEADVQPTTLDLDDDLDMTDLKNALKSISHEEEQNDPAKGDFNMSTN 1602

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
               PK LGD++E +  AI+LD  RD    W+V   L  P +   T  +P++ +R+L E
Sbjct: 1603 VDVPKALGDVLEXLIAAIYLDC-RDLQRTWEVIFNLFKPELQEFTRNVPINAIRQLTE 1659



 Score = 45.1 bits (105), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 1234 DLEGRIVTAAHSG---KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGV- 1289
            D EG+IV+  ++    KR  V  +  E+T  S   +        +  +Y ++   KYG  
Sbjct: 872  DFEGKIVSQWYANFEHKRMLVTKVHRELTPLSLMEKNH------QDKTYYEFTMSKYGNH 925

Query: 1290 --ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPL 1347
              +++ K + +I  R ++   N        S  Q     +I+       L PELCF +  
Sbjct: 926  IGDVVHKDKFMIEVRELTDQLNFYVQNRGKSSAQSKARAKII-------LIPELCFNYEF 978

Query: 1348 PGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
            PG L      LPSI+RR+  +L A  L+ + N
Sbjct: 979  PGDLWLKLIFLPSILRRMHFLLHAEGLRKRFN 1010


>gi|406863987|gb|EKD17033.1| RNase3 domain-containing protein [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 1477

 Score =  183 bits (465), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 184/657 (28%), Positives = 294/657 (44%), Gaps = 121/657 (18%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + RPYQ ++L+++ K+N I  ++TG+GKT IAV+ ++   ++++R +   +  FL P V 
Sbjct: 68  KPRPYQQEMLQESLKRNIIVAMDTGSGKTHIAVMRMQ---HEIERSSPNQIIWFLAPTVD 124

Query: 363 LVYQQAEVIREQTGYVVGHYC-GEMGQDFWDAQ-RWQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ   I+ Q   V   +  G+ G D W  Q  W       +++V T QILL+ L H 
Sbjct: 125 LCDQQFAYIQSQITAVQSKFLRGDDGVDRWTEQTHWNAVLKNVKIVVSTYQILLDALSHG 184

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYH--TTSKEKRPSVFGMTASPVNLKGVSS 478
            + ME + L++ DE H+ VK H  + +M+ FYH    S    P + G+TASPV      S
Sbjct: 185 FVSMETLALIVFDEAHNCVKSHAGAKIMTNFYHGRKASNLGVPRILGLTASPVMRSDPRS 244

Query: 479 QVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEYDKAA---------SLWS 528
            V        +E  LD++  T  K R EL   V +P  V V Y  A          ++ +
Sbjct: 245 LV-------KIEEVLDAICRTPSKHRSELRLQVKLPKLVTVLYQTAPQAGSEGHTKTMKT 297

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAK-----EELRQVYGVSERTESDGAA 583
           L +    MEV  +           W    ++D   K     + LR  +     ++     
Sbjct: 298 LEDAFSNMEVTAD----------PWYLYLSKDTSEKGRKKFDRLRINHNTWCHSQMKSFH 347

Query: 584 NLIQKLRAINYALGELGQWCA-YKVAQSF--LTALQNDERANYQLD--VKFQESYLSKVV 638
               K+      L +LG W A Y V+Q    LT + N    +  L    K ++ +L+KV 
Sbjct: 348 TTATKI------LRDLGAWAADYYVSQVIRKLTKVANGSATHTDLSDMSKAEKLHLTKV- 400

Query: 639 SLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVA 698
            L Q EL + +             GF              D H++S              
Sbjct: 401 -LQQVELSQRSCL-----------GFE-------------DLHLLSD------------- 422

Query: 699 DGKVTPKVQSLIKILLKYQHTEDFRAIIFVE-RVVAAL---VLPKVFAELPSLSFVKSAS 754
                 KV  LI +LL       F  I+FV+ R +A L    +        S S   + S
Sbjct: 423 ------KVTKLIDVLL--NEPASFSGIVFVQVRDLATLDRQSMKTYLTTGASDSSHPAPS 474

Query: 755 LIG--------HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
            IG         N S  +   + + T+++F+ G++ L +ATSV EEG+D+  CN VI F 
Sbjct: 475 DIGTPLVRARVRNISDLIDLNEQKHTLSRFKSGQINLAIATSVLEEGIDVPACNTVICFQ 534

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKE-AIERTDLSH 865
               + +++Q RGRAR   S  +L+ +  +     +    +  EE +RK    ER  L  
Sbjct: 535 APANIKSFVQRRGRARHRDSRLVLLSDYADGKVVEW----KKLEEDMRKMYEDERRTLQS 590

Query: 866 LKDTSRLISVDAVP--GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF 920
           L     L++ D+    G V++VE+TGA++ +++AV  ++ +C+++P   Y   RPEF
Sbjct: 591 L-----LLAEDSEEDDGRVFRVETTGALLDMDNAVAHLYHFCAKIPQSAYVDRRPEF 642



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 210/485 (43%), Gaps = 107/485 (22%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---I 1387
            K Y   LP   C    +P  L +  + +PSIM R+E   LA  L   I   +       I
Sbjct: 929  KPYSTVLPLTRCTEDKMPRILYQFGRFIPSIMYRLEKSFLATLLTKTILKDIQIQDLNGI 988

Query: 1388 LEALTAASCQETFCYE---------RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            + A+TA+S  +   YE         R E LGD  LK   S  L  +YP  HEG LT ++ 
Sbjct: 989  VTAITASSASDESHYENIKYEANYQRLEFLGDTILKMCTSIQLMAQYPLWHEGYLTELKG 1048

Query: 1439 QMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAE 1498
            ++VSN  LY  A+  GL  +I   +F+  +W      P + +D                 
Sbjct: 1049 RIVSNSCLYAAAIENGLDRFIITKKFSGHKWR-----PTYVDDLL--------------- 1088

Query: 1499 DKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG--GKDAAN 1556
              +GTD                       R +SSK  ADVVEALIG  Y +G  G +   
Sbjct: 1089 -AMGTDH------------------VDKPRTMSSKIPADVVEALIGACYEDGEMGFEKPL 1129

Query: 1557 HLMKWIGIQVESDP----EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
              +K    +++  P    + +     P       LR      LED L  +F ++GLLVEA
Sbjct: 1130 QCLKIFIPRIDWQPLAQSQSLLFQRAPNVELPQTLR-----ILEDMLGYEFNNKGLLVEA 1184

Query: 1613 ITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY--TNLPPGRLTDLRAAAVNNENF 1670
            +THAS  + G +  +RLEF+GDA+LD+L+ + L  +   T +   ++  +R A VN +  
Sbjct: 1185 VTHASY-NLGSASLERLEFLGDAILDYLVVERLMQTEDGTFISHVKMHLIRTALVNADIL 1243

Query: 1671 ARVAVKHK---------------------------LHVHLRHGSSAL--DRQIRDFVKEV 1701
            A + ++                             L   +RH SSA+  ++Q+   + ++
Sbjct: 1244 AFLCMEFHTTQEVIDLEIQPDGGSPQERPKMATLPLWKFMRHTSSAIAAEQQVAAELHDL 1303

Query: 1702 LEELLKPGFNSFG------LGDCKAPKVLGDIVESIAGAIFLDSGRDTS-------VVWQ 1748
            L   ++  F+S        L   +APK   D+VES+ GA+++DSG D          +W 
Sbjct: 1304 LAPKIRDVFDSGKNYPWALLARQQAPKFFSDLVESLIGALYVDSGLDACRQFLERLKIWS 1363

Query: 1749 VFQPL 1753
            +++ L
Sbjct: 1364 IYRRL 1368



 Score = 42.4 bits (98), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 18/206 (8%)

Query: 1601 IKFKDRGLLVEAITHASRPSSG-------VSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            I+ +D   +V AIT +S             + YQRLEF+GD +L    +  L   Y    
Sbjct: 980  IQIQDLNGIVTAITASSASDESHYENIKYEANYQRLEFLGDTILKMCTSIQLMAQYPLWH 1039

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
             G LT+L+   V+N      A+++ L   +     +  +    +V    ++LL  G +  
Sbjct: 1040 EGYLTELKGRIVSNSCLYAAAIENGLDRFIITKKFSGHKWRPTYV----DDLLAMGTDHV 1095

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDS--GRDTSV-VWQVFQPLLD--PMVTPETLPMH-- 1766
                  + K+  D+VE++ GA + D   G +  +   ++F P +D  P+   ++L     
Sbjct: 1096 DKPRTMSSKIPADVVEALIGACYEDGEMGFEKPLQCLKIFIPRIDWQPLAQSQSLLFQRA 1155

Query: 1767 PVRELQERCQQQAEGLEYKASRSGNL 1792
            P  EL +  +   + L Y+ +  G L
Sbjct: 1156 PNVELPQTLRILEDMLGYEFNNKGLL 1181


>gi|426198231|gb|EKV48157.1| hypothetical protein AGABI2DRAFT_202619 [Agaricus bisporus var.
            bisporus H97]
          Length = 1179

 Score =  183 bits (464), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 251/1114 (22%), Positives = 443/1114 (39%), Gaps = 183/1114 (16%)

Query: 720  EDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQEMR---------- 765
            ++FR IIFV+ R+VA L++  +   +P L F++  SL  +   ++S+             
Sbjct: 159  DNFRGIIFVQKRIVAQLLVALIHISMPRLQFLRPISLTNYRVLSDSEAFVCDIFLTHVPV 218

Query: 766  TFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
            T+ +QE + + F  G   LL+AT   E+   + +  VVI FD+ ++ ++   +R  A   
Sbjct: 219  TYPLQERMTQQFVSGEYNLLIATKSFEDA-GLPKAPVVILFDVFESQISRAYTRRCASVQ 277

Query: 825  GSDYILMIERGN-LSHATFLRNARNSE-----ETLRKEAIERTDLSHLKDTSRLISVDAV 878
            G   I M+E+GN L H     +A + E      TL  +   R      ++++   + D+ 
Sbjct: 278  GGYLIHMLEQGNSLHHYALSHSALDPEMIRWATTLENDYFNRAPPQPPQESNDPYNSDSE 337

Query: 879  PG---TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
                  V Q   TG  +  N +    H Y ++  +        +F+ ++       +E+ 
Sbjct: 338  DDRDLEVIQDPITGHHIRKNQSTIAFHRYAARADAQTKCEDLFKFVSQKSTY----SEWR 393

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
            C++ L    P + + GP   +  LA++  C  AC +L   G           + + +   
Sbjct: 394  CRINL-AGTPVDGVSGPAAPTKALARKEACYIACLRLQHFGLLDSAFFFRTRARKVESHD 452

Query: 996  DQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGIS 1055
            +  D  +P  G+   R   P     +    W  S     +   L+ + +     V++   
Sbjct: 453  ETFDCPDPHSGSIHERPHIP-----LTPEFWKNSILTSPSLRFLYPIVVSIPFPVSSVCE 507

Query: 1056 KDPF-------LTQVSDF-------AVLFSSE------LDA-ELASLKNFHVRLMSIVLD 1094
            K P        L  +  F       A+   S+      LDA  L  +  F +R   ++++
Sbjct: 508  KAPICILTRAPLPPIPQFQLSHDGDALTLQSQRYLPLSLDAGRLDLIHKFTIRFCRMIMN 567

Query: 1095 VDVEPYTTPWDPAKAYLFVPV------VSDKSVDPMNELDWDLVEKITKTDAWTNPLQRA 1148
               +P+         Y+F P+        D+  D   ++DW++V  +++   W  P    
Sbjct: 568  ---KPFEALSYKNLGYMFAPLRKAWKPPDDEEYDLSEDIDWEMVSVVSEN--WAVPF--- 619

Query: 1149 RPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAIAQFDVVKASGLVPDR 1208
                                                      G + Q        L+ DR
Sbjct: 620  ------------------------------------------GDLTQLRKEAEDALIQDR 637

Query: 1209 EAMQIHNADMPTGKLMMADSCANAGDLEGRIVTA--AHSGKRFYVESIRYEMTAESSFPR 1266
                 +  ++   +  M  +    G + G +      H+G+ F+ +  +  +  E  + R
Sbjct: 638  AVEFTNRYEILCIREDMTPTSVVEGKVSGLLFRMWRPHNGRYFFRQGGKTLL--EQCYSR 695

Query: 1267 KEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGE 1326
            ++ + G                  L    QP++    +    N L+P             
Sbjct: 696  RKNFEG------------------LAHPNQPILEVMRMPAPTNYLNPPISQL-------- 729

Query: 1327 EILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDK-INYPVPAS 1385
            E+  KT    +P E C    +  S +R    LPSI+RR++  LL  QL  K +N+ V   
Sbjct: 730  ELPAKTTQFLIP-ECCRRLTVSASTLRMGYLLPSIIRRIDEFLLIKQLNAKNLNHCVKDD 788

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
             ++ A ++      + YER ELLGDA LK++ + ++F++     EG+L   RQ+ +SN  
Sbjct: 789  LLIMATSSPLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQ 848

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDG--------DSSLFDQEKSVA 1497
            L       GL  YIQ   F    W  PG+    D+  K+         D  L  +     
Sbjct: 849  LCDIVSGWGLPGYIQLKPFNIKSWLPPGM--TIDDRQKESTVGGGVVDDGHLDMRPAQPN 906

Query: 1498 EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANH 1557
            ED++G  K          ++ +   +  +   +++KT+ADV EA+IG  Y+ GG+D+A  
Sbjct: 907  EDRIGASKR--------PKNKKRRLNKKTLSPIANKTVADVAEAIIGAAYISGGRDSALK 958

Query: 1558 LMKWIGIQVESDPEEVGCPSRPACVPE----SVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
              K + I   +D EE     R A  P             H +E     +F+   LL   +
Sbjct: 959  ATKALMIPF-ADVEEWADFGRKASAPRHDTGHAPEPSVMHFIETITGFRFQQPSLLRLTL 1017

Query: 1614 THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            T  S     +  +QRLEF+GDAVLD L+ ++L+    +  PG L+ +++  V+N   A +
Sbjct: 1018 TQNSM---EMKDHQRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAI 1074

Query: 1674 AVKHKLH--VHLRHGSSALDRQIRDFVK--------EVLEELLKPGFNSFGLGDCKAPKV 1723
             V   LH  VH+R     +   + D+ K        E      +    ++   D   PKV
Sbjct: 1075 CVWSGLHRFVHVRQQQKQV---VWDYEKALRGREAAETASTSKEAARVTYFWMDLDVPKV 1131

Query: 1724 LGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            L D++ESI GA ++      + V  +F  +L P 
Sbjct: 1132 LSDVIESIIGAAYISDDFSQAGVEVIFDQMLLPF 1165


>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
            [Cucumis sativus]
          Length = 338

 Score =  183 bits (464), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/337 (35%), Positives = 185/337 (54%), Gaps = 11/337 (3%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            ALE  L   F ++ LL EA+TH S  +S  + Y+RLEFVGD+ +   IT + F +  +L 
Sbjct: 7    ALERILSYNFNNKSLLEEALTHXSYSAS--ASYERLEFVGDSAIGLAITNYFFLASPHLH 64

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
             G L+ LRAA V+ E  ARVAV H L+ ++R  S A+D ++++FV  V  E     +   
Sbjct: 65   QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEFVDSVALEGSSVHYGRL 124

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
                 KAPKVL DIVES+AGA+++D   D   +W + + LL+P+ T E L +   PV  L
Sbjct: 125  ----MKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTVL 180

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             +  Q+  + ++ K  ++G+ +   V++DG  V    + QK++A+  AAR AL  L +  
Sbjct: 181  FQVGQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDSM 240

Query: 1832 TAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVR 1891
              E K     +G       +   +Q L+D+C +R W  P Y   ++ GP+H + F  +V+
Sbjct: 241  DTELKHFVTIDGIDESFEIEG-AKQKLHDVCCKRKWQKPNYSVEKDLGPSHERIFVCSVK 299

Query: 1892 VNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
            + T     T   VG+    VK A++SAA L++  L +
Sbjct: 300  IATCYG--TFYIVGDEKSRVKDAENSAASLMIRALQE 334



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 53/219 (24%)

Query: 1372 IQLKDKINYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            I L+  ++Y      +LE ALT  S   +  YER E +GD+ +   ++ + FL  P  H+
Sbjct: 6    IALERILSYNFNNKSLLEEALTHXSYSASASYERLEFVGDSAIGLAITNYFFLASPHLHQ 65

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
            G L+ +R   VS   L + A++ GL +Y++ D             P  D   K+   S+ 
Sbjct: 66   GHLSLLRAANVSTEKLARVAVTHGLYNYVRRDS------------PAMDVKVKEFVDSV- 112

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSY-RVLSS-KTLADVVEALIGVYYV 1548
                                         LEG S  Y R++ + K LAD+VE++ G  YV
Sbjct: 113  ----------------------------ALEGSSVHYGRLMKAPKVLADIVESVAGAVYV 144

Query: 1549 EGGKDAANHLMK-WIGIQVESDP----EEVGCPSRPACV 1582
            +   D    L K W+ I+   +P    EE+    +P  V
Sbjct: 145  DVNFD----LQKLWVIIRGLLEPIYTLEELQVEPQPVTV 179


>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
          Length = 1417

 Score =  182 bits (462), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 182/753 (24%), Positives = 329/753 (43%), Gaps = 138/753 (18%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAV--------------------------L 336
           ++R YQ+++L+ + K+N I  ++TG+GKT ++V                           
Sbjct: 56  RSRGYQIEMLDASIKQNIIVAMDTGSGKTQMSVNYTHAETLSYDHLNNQASSNTVGHIYS 115

Query: 337 LIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR 395
            I  I ++L+R +   L  FL PKVPL  QQ   I +Q   Y      G    + W  Q+
Sbjct: 116 AILRIRHELERCSNDKLVWFLAPKVPLAEQQYRAISQQLPAYQTKILTGADNLERWSTQK 175

Query: 396 -WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT 454
            W       +++V T QILL++L +  I +  I LL+ DE HH VK  P + +M  FYH 
Sbjct: 176 IWDAFLLNTRIVVSTPQILLDVLSNGFITLRRIALLVFDEAHHCVKASPENKIMKNFYHA 235

Query: 455 -----TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEK 508
                +     PS+ G+TASP + K     +   ++   LE  L +   T    R+E+ +
Sbjct: 236 RIDQLSETNDLPSILGLTASPTS-KLTEDSLSLLMESRQLEQNLHACCKTPSFHREEMMQ 294

Query: 509 HVPMPSEVVVEYDKAASL-----WSLHEQLKQMEVAVEEAAQ----SSSRRSKWQFMGAR 559
           +V +P  + + Y K +++           L  +++  +   Q     + R+S  +FM AR
Sbjct: 295 YVHIPELLKISYQKDSTIPHNMEMKFLSMLNDIDIESDPFFQRYKGKTDRKSIERFMRAR 354

Query: 560 D--AGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQN 617
           D      ++L++ +                    +++  GELG W     + +F++ +  
Sbjct: 355 DRKTPCLDQLKRCFT------------------RVSHIYGELGHW----ASSTFISEIYR 392

Query: 618 DERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGEL 677
             R                               +K AK++D    + E   ++      
Sbjct: 393 RTR-------------------------------EKRAKLID--QSWSEWDRDD------ 413

Query: 678 LDSHVVSGGEHVDVIIGAAVADGK---VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAA 734
             S + +  + V  IIG    +     V+ KV+ L+  LL  + T   R IIFVE+   A
Sbjct: 414 -SSFLCNALKPVVAIIGERCWNSTPDAVSQKVEHLVD-LLASELTGTSRGIIFVEQRATA 471

Query: 735 LVLPKVFAELPSLSFVKSASLIGHNN--------SQEMRTFQMQETIAKFRDGRVTLLVA 786
           ++L  + +  P L+ +     +G++         ++  +   M+ +I   + G+  LLVA
Sbjct: 472 VMLSHLISHYPELAHIMPDYFLGNSAFSDRKADITELSKPGDMKNSIDDLKSGKKNLLVA 531

Query: 787 TSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI-ERGNLSHATF--L 843
           TSV EEG+D+  C++V+ FD  K + +++Q RGRARK  S +++   E    +H  +  +
Sbjct: 532 TSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKQSSKFVIFYAEDDTATHKDWEAM 591

Query: 844 RNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
            +         KE I+R      ++     S+        ++ESTGA+++L +A   +  
Sbjct: 592 EDIMKERYFNNKEFIDRLREEDDEEDVEYESL--------RIESTGALLTLENARSHLSH 643

Query: 904 YCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC--NAPFEKLEG-PVCSSMRLA 960
           +CS LP + ++  +P+FI+      G     + K+ LP   +  F + EG       ++A
Sbjct: 644 FCSTLPCE-FTDTQPDFII---SNSGIKDMLTAKVLLPTVLDLQFREFEGIQAWKREKMA 699

Query: 961 QQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQE 993
           ++     A  +L++ G   D L+P+      +E
Sbjct: 700 KRDAAFQAYLQLYKAGLVNDHLMPEHCRTTDEE 732



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 87/390 (22%)

Query: 1392 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            ++ S +E   Y+R E LGD+ LK   S  L  ++P  HEG L++ +  +VSN  L++ A+
Sbjct: 971  SSTSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAV 1030

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
              GL  +I    F  ++W      P+++                            + Y 
Sbjct: 1031 DTGLDQFILTTCFTGAKWR-----PLYN----------------------------STYA 1057

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE 1571
            D+  + GE      S R LS+KTLADVVE+LIG   ++GG++     ++    ++   P 
Sbjct: 1058 DNAGKIGE-----KSTRELSTKTLADVVESLIGAAIIDGGENKVLRCLELFLPEINWQPS 1112

Query: 1572 ----EVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS 1624
                E+   S P      P  ++  +     E  +   F  + LL  +++H S   S ++
Sbjct: 1113 GERIEILFDSAPDFNDDCPRDIMSKI-----EPLIDYSFTKKALLATSLSHPSNLISRMT 1167

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV--- 1681
             YQRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +     V   
Sbjct: 1168 -YQRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALVNADFLAFLCMNTSTDVTRE 1226

Query: 1682 -----------------------HLRHGSS-------ALDRQIRDFVKEVLEELLKPG-- 1709
                                   ++ H S+       A+ R   + +++ +E+ L+ G  
Sbjct: 1227 DVCVSPTGEVEVTSSTHQVSLWQYMSHSSTDIVETQQAIARTFEE-LRDQIEKALRSGAS 1285

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
            +    L    APK   DI+ESI GAIF+DS
Sbjct: 1286 YPWTLLSTLNAPKFFSDIIESILGAIFIDS 1315


>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
          Length = 1396

 Score =  182 bits (462), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 201/732 (27%), Positives = 325/732 (44%), Gaps = 104/732 (14%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A E  P  + R YQ+++ E + K+N I  + TG+GKT IA+L    I  +L+  N   L 
Sbjct: 10  AGEDAPAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALL---RIMKELE-SNPHKLI 65

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQI 412
            FL P V L  QQ + I +    V       + + + W  Q  W       QV+V T  +
Sbjct: 66  WFLTPTVALCLQQFKFISDNIPAVRARTLTSLDKVELWTEQPIWDAILKEMQVVVSTHAV 125

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTA 468
           L + + H  +K+  + L+I DE HH +++HP + +M +FYH        E  P + G+TA
Sbjct: 126 LADAMSHGFVKITQLGLIIFDEAHHCMRRHPANKIMEDFYHPALERHGAEAVPKILGLTA 185

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLW 527
           SPV    V S     +K+   ES LD+V  T +  R EL  H   P              
Sbjct: 186 SPV----VRSNKQELLKV---ESNLDAVCKTPRIHRSELMTHTHRP-------------- 224

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSK-----WQFMGARDAGAKEELRQVYGVSERTESDGA 582
             H Q       + +  Q+ SR  K     W  M   D    ++LR       ++  DG 
Sbjct: 225 --HLQQILFTPVLLDDLQAGSRTLKALVNAWTSMRLEDDPYIKKLR-------KSPLDG- 274

Query: 583 ANLIQKLRAINYALGELGQWCAYKVAQSFLTALQ-NDERANYQLDVKFQESYLSKVVSLL 641
                  RA+   L     +C  ++ +    +L   +E   +  D     S         
Sbjct: 275 -------RALQKVLESGKTYCNDQLKRFTTRSLHIFEELGEWAADYFIYAS--------- 318

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG- 700
               VE   ++ D  V DS      G T+E E+  LLD  +VS      + +  +  D  
Sbjct: 319 ----VEQLKTRADNSV-DSM-----GWTDE-EKAYLLD--IVSKLPTPSIDLTPSDPDRI 365

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHN 759
            ++PK +SL++  L  +   +F  +IF ++     V+ K+ +  P      + AS +G +
Sbjct: 366 PISPKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVGWS 424

Query: 760 NSQ------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
                    E+   +MQ +T+++FR G+  L++AT V EEG+DI  C+VV+ +D    + 
Sbjct: 425 GGGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCYDKPPNLK 484

Query: 813 AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTS 870
           +++Q RGRAR   S Y +M    + S      +A +  E L +  IE    D   L+D  
Sbjct: 485 SFVQRRGRARHRQSTYAIMFSTDDES------SALSKWEDLEQAMIEAYEDDERRLRDAW 538

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP-- 928
            L +++       +V STGAV++ ++AV  ++ +C+ LP   Y+   PEF  E+ +    
Sbjct: 539 ALEAINEEVVERLEVPSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSFEKDDADLL 598

Query: 929 -GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
            G  T  SC      +    + +G     + R A++     A K+L+E G  +D LLP K
Sbjct: 599 RGTVTLPSC-----VHPGVRRTQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFK 653

Query: 987 GSGEQQEKVDQN 998
            + E +E    N
Sbjct: 654 RNLELKETDHTN 665



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 190/443 (42%), Gaps = 89/443 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTAASC 1396
            E C I  LP +     + +  I+ R+E+ L+A +L + I   +  S I   + A+TA S 
Sbjct: 884  ENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHVITAITAPSA 943

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            Q    Y+R E  GD+ LK+ VS  LF ++P  HEG L++ R ++V N  L + AL  GL 
Sbjct: 944  QSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSQGRDEIVQNSRLARAALDAGLD 1003

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            ++I    F P +W AP                L  ++ S+   +                
Sbjct: 1004 AFIMNKMFTPRKWTAP----------------LISEKISLTPKQ---------------- 1031

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---ESDPEEV 1573
                       R +S+K LADVVEALIG  Y++GG  AA+  +     +V     D    
Sbjct: 1032 -----------RTMSTKVLADVVEALIGASYIDGGFAAAHACIHRFLPEVNLEHIDRTTT 1080

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFV 1632
              PS P    +  L   D H L   +   F  + LLVE++TH S +  +    YQRLEF+
Sbjct: 1081 TAPSTPEGTTKHTLN--DDH-LMTHIGYTFTHKSLLVESLTHPSCQFDTTTQSYQRLEFL 1137

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE-------NFARV------------ 1673
            GDAVLD  I   L      +P G++T ++ A VN          FA V            
Sbjct: 1138 GDAVLDMAIMSTLLSHPHEIPQGQMTKIKHAVVNANLLAFFCMEFALVEKRSTVQITPSG 1197

Query: 1674 -------AVKHKLHV---------HLRHGSSALDRQIRDFVKEVLEELL-KPGFNSFGLG 1716
                   +  HKL +         HL+    A   +     K ++  L   P +    L 
Sbjct: 1198 TASLNPSSTDHKLELWRFMRYQGAHLQTARDAALARHASLRKSIIHGLQHSPSYPWKYLS 1257

Query: 1717 DCKAPKVLGDIVESIAGAIFLDS 1739
               A K   DI+ESI GAIF+DS
Sbjct: 1258 QLNADKFFSDIIESILGAIFIDS 1280



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 21/157 (13%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E++LR ++F ++             ++ AIT  S  +  ++ YQR EF GD+VL   ++ 
Sbjct: 920  ETILRDLEFSSIRH-----------VITAITAPS--AQSLTNYQRYEFFGDSVLKFTVSC 966

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF + N   G L+  R   V N   AR A+   L   + +      +     + E + 
Sbjct: 967  QLFFQHPNWHEGYLSQGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWTAPLISEKIS 1026

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L P   +       + KVL D+VE++ GA ++D G
Sbjct: 1027 --LTPKQRTM------STKVLADVVEALIGASYIDGG 1055


>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease dcl2; Includes: RecName:
           Full=ATP-dependent helicase dcl2
          Length = 1388

 Score =  182 bits (462), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 192/717 (26%), Positives = 318/717 (44%), Gaps = 116/717 (16%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQL++LE + K+N I  ++TG+GKT IAVL I++   +L   +   +  FL P V 
Sbjct: 15  QPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKA---ELDICSPDKVVWFLAPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQ-DFW-DAQRWQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ EVI      V       + + + W D   W    +  +V+V T  +L + L H 
Sbjct: 72  LCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVSTHAVLADALSHG 131

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VFGMTASPVNLKGV 476
            +KM  + LLI DE HH  ++H  + +M +FYH T  +  P+    + G+TASPV    V
Sbjct: 132 FVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTKSGPAAVPRIMGLTASPV----V 187

Query: 477 SSQVDCAIKICNLESKLDSVVCTIK-DRKELEK--HVP-------MPSEVVVEYDKAASL 526
            S      ++  +ES LD+V  T +  R+EL K  H P        P++       + +L
Sbjct: 188 RSNHQ---ELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPTDPAGFRSASLTL 244

Query: 527 WSLHEQLKQMEVAVEEAAQSSSR-----RSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
            +L+   + +++  +   Q   +     R+  + +       +E+LR+            
Sbjct: 245 GALYHAWENLDIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRR------------ 292

Query: 582 AANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSL 640
               + + R I     ELG+W A Y +  S             QL  + ++SY+S     
Sbjct: 293 ---FVDRSRHI---FEELGEWAAEYYIYASI-----------KQLRDRVRDSYMS----- 330

Query: 641 LQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG 700
                                     G  +E E+  L+D   +S     D+       DG
Sbjct: 331 --------------------------GDWDEAEKAYLVD--FLSKIPTSDIHFALNDPDG 362

Query: 701 -KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGH 758
            +++PK +SL+  L      E F  +IFV++ V    +  + +  P +    + A+ +G 
Sbjct: 363 FRISPKFESLLNFLDSSDQRE-FSGLIFVKQRVTVSAMTSLLSVHPYTRERFRCAAYVGW 421

Query: 759 NNSQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
           +NS        ++   Q+Q +T+  FR GR  L++AT V EEG+D+  C+VV+ +D    
Sbjct: 422 SNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPN 481

Query: 811 VLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKD 868
           + ++IQ RGRAR+  S + +M    + S         +  + L +  IE  + D   L+ 
Sbjct: 482 LKSFIQRRGRARRKQSTFAIMFPTDDTSADV------SRWQDLEQAMIEAYQDDERQLQS 535

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
            S L S+D         +ST AV++ + A+  +H +C+ LP   Y  +RP F  E +E  
Sbjct: 536 VSALESLDEEVMERLTGDSTSAVLTADMAMAHLHHFCAVLPPQPYVDMRPVFSFETNED- 594

Query: 929 GGPTEYSCKLQLPCNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            G  + +  L    +    + EG     + R A +     A K L+E G   D LLP
Sbjct: 595 -GLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKSLYEFGLVNDHLLP 650



 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 191/442 (43%), Gaps = 89/442 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAASC 1396
            E C I  LP ++      + +I+ ++E  L+A +L+D I   V       I+ A++    
Sbjct: 888  EACTIDRLPFTMAIFGLFISAIVEQLEIELIATRLRDTILRDVSFKSTDHIITAISTPLA 947

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
                 Y+R E LGD+ LK+ VS  LF ++P  HEG L+  R  +V N  L + AL  GL 
Sbjct: 948  HRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLD 1007

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            +YI   R A  +W+AP +                                          
Sbjct: 1008 AYIVTKRLASRKWSAPLI------------------------------------------ 1025

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
              E  G   + R +S+K LADVVEALIG  YV+GG   A   ++    ++     +    
Sbjct: 1026 -SEKLGRVPAKRQMSTKVLADVVEALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTA 1084

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDA 1635
            +R +  PES  R +    L+D +   F+D  LLVEA+TH S    S    YQRLE++GDA
Sbjct: 1085 AR-SVAPESA-RHMMNDRLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDA 1142

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------------NENFA 1671
            VLD +I   +F      P G +T ++ A VN                         ++FA
Sbjct: 1143 VLDMVIVSAIFNHRIQRPQGDMTKIKHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFA 1202

Query: 1672 RVAVKHKLHV------------HLRHGSSALDRQIRDFVKEVLEELLK-PGFNSFGLGDC 1718
              + +  + +              R  S A  R +RD   E+   LL+ P +    L   
Sbjct: 1203 VTSSQESVELWRFMRYRGQGLKAARDASLARHRALRD---EIASSLLQAPHYPWHALSRL 1259

Query: 1719 KAPKVLGDIVESIAGAIFLDSG 1740
             A K   DI+ES+ GAIF+DSG
Sbjct: 1260 NADKFFSDIIESVLGAIFVDSG 1281



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 1601 IKFKDRGLLVEAITHASRP-SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
            + FK    ++ AI   S P +  ++ YQR EF+GD++L   ++  LFF + N   G L++
Sbjct: 930  VSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSE 986

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
             R   V N   A+ A+   L  ++     A  +     + E L  +  P           
Sbjct: 987  GRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRV--PAKRQM------ 1038

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTS 1744
            + KVL D+VE++ GA ++D G  T+
Sbjct: 1039 STKVLADVVEALIGAAYVDGGHSTA 1063


>gi|116196272|ref|XP_001223948.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
 gi|88180647|gb|EAQ88115.1| hypothetical protein CHGG_04734 [Chaetomium globosum CBS 148.51]
          Length = 1476

 Score =  182 bits (462), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 202/692 (29%), Positives = 303/692 (43%), Gaps = 156/692 (22%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNKKM---LAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIA LL+R +I N+L+ ++K++   +A FLV K
Sbjct: 136 RDYQLELFERAKTQNTIAVLDTGSGKTLIAALLLRWTIQNELEDRSKRLPKRIAFFLVDK 195

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+     Y +  +CG+M +D      W + FD    +V TA+IL   L HS
Sbjct: 196 VALVFQQHAVLACNLDYPLEKFCGDMVEDV-TQDFWHKTFDENMAIVCTAEILYQCLTHS 254

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+                                        MTASPV+     +Q+
Sbjct: 255 YIRMDQ--------------------------------------AMTASPVD-----AQI 271

Query: 481 DCAI-KICNLESKLDSVVCTIKDRKELEKH-VPMPSEVVVEYDKAASLWSLHEQLKQMEV 538
           D  I +   LE  L S + T+ D   L      +  EV VEY K          L + E 
Sbjct: 272 DPKIARSPELEGLLHSQIATVADPTALHNSSTKLKREVTVEYGKC---------LPEFET 322

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN-YALG 597
            +  A +                                +  G   L QK  A    A  
Sbjct: 323 GLNRALK--------------------------------DLVGEHRLFQKPFAFTATAAS 350

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
           ELG WCA +  Q F    +       +L+ K +   L K            A S++ A  
Sbjct: 351 ELGPWCADRYWQLFFRGEEV-----VKLEAKTEREILRK-----------SAYSQEIAAQ 394

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ 717
           V           N++ E   L       G+H      A+ +   ++ KV  L++IL    
Sbjct: 395 V-----------NKVREAHRL------VGQHE----FASPSSDLLSSKVVILLRILRGEF 433

Query: 718 HTEDF--RAIIFV-ERVVAALV---LPKVFAELPSLSFVKSASLIG-------HNNSQEM 764
              D   R I+FV +R VA+L+   L +    +P L   +   L+G       ++N++  
Sbjct: 434 RGVDHKRRCIVFVRQRNVASLLTDLLQQPEMRIPGL---EPGILVGGGRPEASYDNAKVT 490

Query: 765 RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
              Q+  TI KF+ G +  + ATSVAEEGLDI  CNV+IR+DL  T++ YIQSRGRAR+ 
Sbjct: 491 YRDQVL-TIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDLNNTLIQYIQSRGRARQE 549

Query: 825 GSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--ERTDLSHLKDTSRLISVDAVPG 880
           GS YI M+E  N  H   +   + SE+ LRK  EA+  +R    +  D    +  +    
Sbjct: 550 GSIYIHMVESENEEHVKKVCQNQESEDALRKFCEALPADRKLTGNNFDMEYFLRKEK-DQ 608

Query: 881 TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
             Y V  TGA ++   ++  +  + + LP      L   +++     PGG   Y C++ L
Sbjct: 609 RQYTVPETGARLNYKQSLICLAAFVASLPHPPEVNLTAGYLV--LSVPGG---YQCEVTL 663

Query: 941 PCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
           P ++P     G V +S  +A+ +     C  L
Sbjct: 664 PESSPIRSATGKVYASKAVAKCSAAYEMCLML 695



 Score = 87.4 bits (215), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 165/442 (37%), Gaps = 106/442 (23%)

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QE 1398
            LP  LV  A   P+IM R++S L+A++    +N  V     LEA T  S         Q 
Sbjct: 967  LPVDLVAMAYNFPAIMHRIDSNLVALEACKMLNLNVRPDLALEAFTKDSDNSGEHDAEQI 1026

Query: 1399 TF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
            +F       YER E LGD +LK   +  +F   P K E +    R  ++ N  L+  AL 
Sbjct: 1027 SFQSGMGNNYERLEFLGDCFLKMATTISIFTLIPDKAEFEYHVERMLLICNRNLFNNALE 1086

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              L+ +I++  F    W   G+                                      
Sbjct: 1087 VKLEEHIRSMAFDRRSWYPEGL-------------------------------------- 1108

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL---MKWIGIQVE-- 1567
              ++ G+   D +   VL+ KT+ADV EALIG  Y+   +    +    ++ + + V+  
Sbjct: 1109 -TLKKGK-RKDLTRQHVLADKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDK 1166

Query: 1568 -------SDPEEVGCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHASRP 1619
                   SD      P      P +  + +D  A  E  +   F    LL  A  H + P
Sbjct: 1167 NHTMTSYSDYYAAYSPPAWQTAPCNSTQ-LDMAARFEARMGYAFTHPRLLRSAFQHPTYP 1225

Query: 1620 S--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
            S    +  YQRLEF+GDA+LD    + LF  +    P   T                   
Sbjct: 1226 SVYEKLPSYQRLEFLGDALLDMASVEFLFHRFPGADPQSKTPCN---------------- 1269

Query: 1678 KLHVHLRHGS--SALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1735
                  RH +  S  D     F ++            F +   + PK L D+VE+  GA+
Sbjct: 1270 ------RHATTPSPGDLPAESFARD------------FWVRCSRPPKCLPDVVEAYVGAV 1311

Query: 1736 FLDSGRDTSVVWQVFQPLLDPM 1757
            F+DS  D + V   F   + P 
Sbjct: 1312 FVDSRYDFARVRAFFADHVRPF 1333


>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
 gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
           Full=Endoribonuclease dcl2; Includes: RecName:
           Full=ATP-dependent helicase dcl2
 gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
          Length = 1388

 Score =  182 bits (461), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 190/711 (26%), Positives = 306/711 (43%), Gaps = 104/711 (14%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQL++LE + K+N I  ++TG+GKT IAVL I++   +L       L  FL P V 
Sbjct: 15  QPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKA---ELDICPPDKLVWFLAPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ EVI      V       + + + W  Q  W    +  +V+V T  +L + L H 
Sbjct: 72  LCIQQHEVIASNLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIVSTHAVLADALSHG 131

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VFGMTASPVNLKGV 476
            +KM  + LLI DE HH  ++H  + +M +FYH T  +  P     + G+TASPV    V
Sbjct: 132 FVKMSRLALLIFDEAHHCTRRHAANKIMRDFYHPTLTKSGPGAVPRIMGLTASPV----V 187

Query: 477 SSQVDCAIKICNLESKLDSVVCTIK-DRKELEK--HVPMPSEVVVEYDKAASLWSLHEQL 533
            S      ++  +ES LD+V  T +  R+EL K  H P   ++       A   S  + L
Sbjct: 188 RSNHQ---ELLTVESNLDAVCRTPRVHRQELVKFTHRPHLQQIWYTPTDPAGFKSASQTL 244

Query: 534 KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY---GVSERTESDGAANLIQKLR 590
             +  A             W+ +   D    + LR+        ++    G     ++LR
Sbjct: 245 GALYHA-------------WETLDIGDDPYIQRLRKSPLDDTALKKALLTGKTYCREQLR 291

Query: 591 AI----NYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
                  +   ELG+W A Y +  S             QL  + + SY+S          
Sbjct: 292 RFVDRSRHIFEELGEWAAEYYIYASI-----------KQLGDRVRNSYMS---------- 330

Query: 646 VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPK 705
                                G  +E E+  L+D         + + +       +++PK
Sbjct: 331 ---------------------GDWDEAEKAYLVDFLSKIPASEIQLALNDP-GSFRISPK 368

Query: 706 VQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQ-- 762
            +SL+  L      E F  +IFV++      +  + +  P +    + A+ +G +N    
Sbjct: 369 FESLLNFLDSLDERE-FSGLIFVKQRATVSAMTSLLSVHPCTRERFRCAAYVGWSNGSAS 427

Query: 763 -----EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
                ++   Q+Q +T+  FR GR  L++AT V EEG+DI  C+VV+ +D    + +++Q
Sbjct: 428 KDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQ 487

Query: 817 SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSRLIS 874
            RGRAR+  S + +M    + S         +  + L +  IE  + D   L+  S L S
Sbjct: 488 RRGRARRKQSTFAIMFPTDDASADV------SKWQDLEQAMIEAYQDDERQLQSVSALES 541

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEY 934
           +D        VEST AV++ + A+  +H +C+ LP   Y+ +RP F  E +E   G  + 
Sbjct: 542 LDEEVMERLTVESTSAVLTADMAMAHLHHFCAVLPPQPYADMRPVFSFETNED--GLLKG 599

Query: 935 SCKLQLPCNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +  L    +    + EG     + R A +     A K L+E G   D LLP
Sbjct: 600 TVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKALYEFGLVNDHLLP 650



 Score =  149 bits (375), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 189/441 (42%), Gaps = 87/441 (19%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPV---PASKILEALTAASCQE 1398
            C I  LP ++      + +I+ R+E+ L+A +L++ I   V       I+ A++      
Sbjct: 890  CTIDRLPFTMAIFGLFISAIVERLETELIATRLRETILRDVGFKSTDHIITAISTPFAHA 949

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
               Y+R E LGD+ LK+ VS  LF ++P  HEG L+  R  +V N  L + AL  GL +Y
Sbjct: 950  LTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAY 1009

Query: 1459 IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
            I   R A  +W+AP +                                            
Sbjct: 1010 IVTKRIASRKWSAPLI-------------------------------------------S 1026

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
            E      + R +S+K LADVVEALIG  Y++GG   A   ++ +  ++     +    +R
Sbjct: 1027 EKLERVPAKRQMSTKVLADVVEALIGAAYMDGGHATAQACIRRLLPEINLHAVDTRTATR 1086

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVL 1637
             +  PES  R +    L+D +   F+D  LLVEA+TH S    S    YQRLE++GDAVL
Sbjct: 1087 -SVAPESA-RHMMNERLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVL 1144

Query: 1638 DHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV-----KHKLHV----------- 1681
            D +I   +F      P G +T ++ A VN    A + +     + KL V           
Sbjct: 1145 DMVIVSAIFNHPIQRPQGDMTKIKHAVVNANLLAFLCMESATSEEKLDVAQTSKDSFAVT 1204

Query: 1682 --------------------HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAP 1721
                                  R  S A  R +RD +   L  L  P +    L    A 
Sbjct: 1205 TSQESVELWRFMRYRGQNLNAARDASLARHRALRDEIASSL--LHAPHYPWHALSRLNAD 1262

Query: 1722 KVLGDIVESIAGAIFLDSGRD 1742
            K   DIVES+ GAIF+DSG D
Sbjct: 1263 KFFSDIVESVLGAIFVDSGGD 1283



 Score = 61.2 bits (147), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 23/162 (14%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEFVGDAVLDHLIT 1642
            E++LR V F + +                IT  S P +  ++ YQR EF+GD++L   ++
Sbjct: 924  ETILRDVGFKSTD--------------HIITAISTPFAHALTNYQRYEFLGDSILKFSVS 969

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVL 1702
              LFF + N   G L++ RA  V N   A+ A+   L  ++     A  +     + E L
Sbjct: 970  CQLFFQHPNWHEGYLSEGRAMIVQNPRLAKAALDTGLDAYIVTKRIASRKWSAPLISEKL 1029

Query: 1703 EELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
            E +  P           + KVL D+VE++ GA ++D G  T+
Sbjct: 1030 ERV--PAKRQM------STKVLADVVEALIGAAYMDGGHATA 1063


>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
          Length = 1441

 Score =  181 bits (459), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 214/850 (25%), Positives = 353/850 (41%), Gaps = 176/850 (20%)

Query: 285  CNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND 344
            C+ +  +   A    P    R YQL++L+Q+ K+N I  ++TG+GKT +AVL I++   +
Sbjct: 69   CDNETNRSPSATAMNP----RAYQLEMLDQSLKQNVIVVMDTGSGKTQVAVLRIKA---E 121

Query: 345  LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTK 403
            L R     +  FL P V L  QQ +VIR Q   V +    G    D W A  W    D  
Sbjct: 122  LDRSAPDKIIWFLAPTVALCGQQFDVIRLQAASVPMKLITGNDQVDTWSADTWDTILDGV 181

Query: 404  QVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT--SKEKRP 461
            +V+V T Q+LL+ L H+ I ++ ++L+I DE      KHP S +M++FYH    + E  P
Sbjct: 182  RVVVSTYQVLLDALCHAFINIDRLSLIIFDE-----GKHPGSKIMTDFYHRNKHTAESIP 236

Query: 462  SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDRKELEKHVPMPSEVVVEY 520
            ++ G+TA+P   + + +     ++I  LE+ LD+  +   + R+EL K V  P    + Y
Sbjct: 237  NILGITATPSMTEDLEN-----MEI--LEAVLDAKCISPTRHREELLKCVKRPQIYSILY 289

Query: 521  DKAASL------WSLHEQLKQMEVA-------VEEAAQSSSRRSKWQFMGARDAGAKEEL 567
            D   SL      + L  +   +++        ++E     + R+  + +   D   + ++
Sbjct: 290  DAPRSLQYTESMYRLRREFLNLDITEDPYILRLQEDPSDRNCRALVRAVEKYDTFVQNQI 349

Query: 568  RQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA----YKVAQSFLTALQNDERANY 623
            + ++G S                     L +LG W A    +K A +FL     +   N 
Sbjct: 350  KGLWGRSVEI------------------LQQLGTWAADMYIWKSASAFLARTNTNGIFND 391

Query: 624  QLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVV 683
             LD   ++ YL+  +                 +V  S    +    +E+ E         
Sbjct: 392  WLDA--EKKYLADFIR----------------RVSPSCPAPMPQSGSEVSE--------- 424

Query: 684  SGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE 743
                             K T  V+ L+ +       E    +IFV+    A  L +    
Sbjct: 425  -----------------KATALVRELVSV------EESTICLIFVKERATASALREFLMS 461

Query: 744  LPSL-SFVKSASLIGHNNSQEMRTFQMQETIAK----------FRDGRVTLLVATSVAEE 792
             P +    +  S++G +N Q  R   + E I +          FR G++ +L+ATSV EE
Sbjct: 462  CPRIVEKHRIGSMVGTSNYQS-RKLTLSELIGQSSDQMAALQSFRSGKINILIATSVLEE 520

Query: 793  GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEET 852
            G+D+  CN+VI FD   T  +++Q RGRAR   S  IL+ E              +S   
Sbjct: 521  GIDVPACNMVICFDHPATPKSFVQRRGRARMKESKLILLSE-------------YSSSAV 567

Query: 853  LRKEAIERTDLSHLKDTSRLISV-------DAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
             + EA+E    +  +DT R I         +    T  +VESTGA +   +A   +  +C
Sbjct: 568  GKWEALEENMKAVYQDTQREIRTIQSLEDSEESSSTFMEVESTGARLDFENAKSHLEHFC 627

Query: 906  SQLPSDRYSILRPEFIMERHEKPGGPTE--YSCKLQLPCNAPFEKLEGPVCSSMRLAQQA 963
              L    +   RP++I   HE     ++   S  + LP   P +  +    SS R  + A
Sbjct: 628  RVLSQGDFVDSRPDYITHSHEDWDSSSKPMLSATVLLPSLVPAQLRQIDSKSSWRSEKNA 687

Query: 964  V---CLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVAD 1020
                   A + L++ G   + LLP +               E +PG        PE   +
Sbjct: 688  TKDAAFQAYQTLYQAGLVNEHLLPFR--------------YEDIPGVETRA---PEVEVE 730

Query: 1021 ILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS 1080
             L   W    +    G +    ++Y++KC       DP   + S++ VL  +ELD     
Sbjct: 731  SLLNPWFGVAKAWTEGDQ---SWLYSLKC------HDPMHGE-SEYNVLVPAELD----Q 776

Query: 1081 LKNFHVRLMS 1090
            L+N  + L S
Sbjct: 777  LRNIQLYLNS 786



 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 182/430 (42%), Gaps = 78/430 (18%)

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLK----DKINYPVPASKILEALTAASCQETFCY 1402
            +P    +    +PS++  +E  L+A +L     ++IN       + EA+++ S  E   Y
Sbjct: 947  IPLKFAQFGMLIPSLIHELEVTLIAKELSTTLLERINI-TDLGLVREAISSRSAAEPVNY 1005

Query: 1403 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD 1462
            ER E LGD+ LK+  +  +   +P+  EG L+  + ++V N  L + A+  GL  +I   
Sbjct: 1006 ERLEFLGDSILKYCTAIQVSAIHPEWPEGYLSFFKDRLVGNSRLSRAAIDVGLAKFILTK 1065

Query: 1463 RFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEG 1522
             F   +W      P++ ++       +                                 
Sbjct: 1066 SFTGQKWR-----PLYLDNYTGNPGKV--------------------------------- 1087

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACV 1582
               S R +S+KTLADVVEALIG  Y+ GG   A + +     +++               
Sbjct: 1088 ---SPRKISTKTLADVVEALIGASYINGGITKAQNCISLFVNEIQWQDVSANRALFFKMA 1144

Query: 1583 PESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLI 1641
             +  +   +   LE  +  +FK + LL+EA+TH S         Y+ LEF+GDA+LD +I
Sbjct: 1145 RDQDVLPAELKPLEHLVGYQFKKKSLLIEAMTHQSCMFDYNRRSYEHLEFIGDAILDFII 1204

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK----------------------- 1678
             + ++ +   L P ++  L+ A VN +  A +++ H+                       
Sbjct: 1205 VRKMYTAGPLLAPYQMHSLKTAMVNGDFLAFLSLDHQMRRTETAVTSSLQIIDKETTPLA 1264

Query: 1679 LHVHLRHGSSALDRQIRDFVK-------EVLEELLKPGFNSFG-LGDCKAPKVLGDIVES 1730
            L   +RH S A+  +    +K       E+L  L +     +  L   +A K   DI ES
Sbjct: 1265 LWTFMRHSSEAIGIEQAATLKRYEALRGEILAALRQGSRYPWALLARLQAKKFYSDIFES 1324

Query: 1731 IAGAIFLDSG 1740
            + GA+++DSG
Sbjct: 1325 LLGAVWVDSG 1334


>gi|18402610|ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
 gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName: Full=Ribonuclease 3-like protein 2; AltName:
            Full=Ribonuclease III-like protein 2; Short=RNase
            III-like protein 2; AltName: Full=Ribonuclease three-like
            protein 2
 gi|9294562|dbj|BAB02825.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
          Length = 391

 Score =  181 bits (459), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 195/355 (54%), Gaps = 15/355 (4%)

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDA 1635
            PS P+    S + S++  A+E  L  KF ++ LL EAITH S   +    Y+RLEF+GD+
Sbjct: 46   PSAPSVPVSSEMESME--AVEKILNYKFSNKSLLKEAITHTS--CTDFPSYERLEFIGDS 101

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
             +   I+ +L+ +Y +L P  L+ LRAA V+ E  ARV++ H L+  LR  + +LD +++
Sbjct: 102  AIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVK 161

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +F + V +E       S+G G  KAPKVL D+ ES+AGA+++D   D   +W +F+ LL+
Sbjct: 162  EFSEAVGKE--DDLSVSYG-GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLE 218

Query: 1756 PMVTPETLPM--HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            P+VT + L     PV  L + C +  + ++ K  + GN++   +Y+D   +   +   K 
Sbjct: 219  PIVTLDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKD 278

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            +A+ +AA+ AL  L E    E     DE+  + +    T  +  LN+ICL++ WP P+Y 
Sbjct: 279  IARLIAAKEALRKLSEVFPVEM--VIDEDSVEIQ---LTHAKTKLNEICLKKKWPKPIYS 333

Query: 1874 CVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
               +      KRF  + ++  T++  T    G+    +KKA+ S+A  ++  L K
Sbjct: 334  VEEDRSSVQGKRFVCSAKIKITEEK-TLYMKGDEQSKIKKAESSSAYHMIRALRK 387



 Score = 57.4 bits (137), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 49/219 (22%)

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKIL-EALTAASC 1396
            P    IH    SL   A  +P     V S + +++  +KI NY      +L EA+T  SC
Sbjct: 32   PSSADIHRFYNSLSPSAPSVP-----VSSEMESMEAVEKILNYKFSNKSLLKEAITHTSC 86

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
             +   YER E +GD+ +   +S +L+L YP      L+ +R   VS   L + +L+ GL 
Sbjct: 87   TDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLY 146

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            S+++  R APS           DE  K+   ++                     ++DD+ 
Sbjct: 147  SFLR--RNAPS----------LDEKVKEFSEAVG--------------------KEDDL- 173

Query: 1517 DGELEGDSSSY--RVLSSKTLADVVEALIGVYYVEGGKD 1553
                   S SY   V + K LAD+ E+L G  YV+   D
Sbjct: 174  -------SVSYGGLVKAPKVLADLFESLAGAVYVDVNFD 205


>gi|359485630|ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
 gi|297739192|emb|CBI28843.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  181 bits (458), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 142/234 (60%), Gaps = 13/234 (5%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             +E  L   F ++ LL EA THAS   +  S Y+RLEF+GD+VL  LITK  FF Y +L 
Sbjct: 32   GVEQILGYSFTNKRLLEEAYTHASCQKNQFS-YERLEFMGDSVLSLLITKEQFFLYPDLQ 90

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            PGRLT LR+A V+ E  ARVA+KH LH  LRH    +++QI +F + + E  L       
Sbjct: 91   PGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPLHSN---- 146

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
              G  + PKVL D+VES  GA+F+D       VW+VF+ LL+PM+ PETL +HPV EL E
Sbjct: 147  --GQIEVPKVLADVVESTIGAVFVDCNCSVDTVWKVFKGLLEPMIVPETLKVHPVTELNE 204

Query: 1774 RCQQQAEGLEYKAS--RSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNAL 1824
            RCQ++   LE+K S  R G+   ++ YI+    G  + P +K +A   AA+ AL
Sbjct: 205  RCQKRGLKLEFKDSWQRRGD---IDFYIEDYFAGRGEYPLRKDIALNRAAKAAL 255



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 42/162 (25%)

Query: 1389 EALTAASCQET-FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            EA T ASCQ+  F YER E +GD+ L  ++++  F  YP    G+LTR+R   V    L 
Sbjct: 49   EAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLA 108

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + AL  GL  ++        R   P +           +  +++  +++ E  L +    
Sbjct: 109  RVALKHGLHRFL--------RHKKPKI-----------EQQIYEFAEAIKEYPLHS---- 145

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
                     +G++E           K LADVVE+ IG  +V+
Sbjct: 146  ---------NGQIE---------VPKVLADVVESTIGAVFVD 169


>gi|302662009|ref|XP_003022664.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
 gi|291186623|gb|EFE42046.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
          Length = 1510

 Score =  181 bits (458), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 180/694 (25%), Positives = 292/694 (42%), Gaps = 142/694 (20%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK+KN IA LETG+GKTLIAVLL++ +    Q    + L   L P++   
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLKHVIE--QELTDRSLG--LPPRISFF 167

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
                 I ++    +  +CG M  D W+ + W+  F    V+V TA++L   L HS I++
Sbjct: 168 LNN---IPQK----IDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQI 220

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V+   
Sbjct: 221 DQINLLIFDEAHHAKKEHPYARIIKDFY-LKEPERKPKIFGMTASPVDAK-----VEVVG 274

Query: 485 KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAA 544
               LE+ LDS + T  +   L + V  P+E + EYD+             +E+  E   
Sbjct: 275 AAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDR-------------LELPFETPL 321

Query: 545 QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
            S  R+           G  + L +++  S  T S                   LG WC+
Sbjct: 322 YSKLRQK---------FGDIKVLEKIFKFSRETSSS------------------LGSWCS 354

Query: 605 YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF 664
             +    L+     E    +L+ +     +  +     C+     + +  A + + E G 
Sbjct: 355 DWIWSYCLS-----EETLPKLEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFG- 408

Query: 665 VEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRA 724
                + +   ELL   V+   + +                         +++   D R 
Sbjct: 409 -----DPVANPELLSRKVLLLRDQLLR-----------------------RFKENPDTRC 440

Query: 725 IIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLL 784
           I+F  +   A +L  +F ++ S  +++   L+G  +  +     +      FR+  + ++
Sbjct: 441 IVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDKIGLDIS-----FREQFLNVI 494

Query: 785 VATSVAEE--------GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL------ 830
               V E         G D       +RFDL  T++ YIQSRGRAR   S   +      
Sbjct: 495 AFRKVNESNEYLIPGLGTDFN-----LRFDLYSTLIQYIQSRGRARHMESTVCITYLEVS 549

Query: 831 ------------MIERGNLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISV 875
                       M+ER NL H T +      EE L    K   E   L    D   +I  
Sbjct: 550 LVQTNIFTQFAHMVERNNLMHETAVE-----EEVLTRFCKSLPEDRLLKGTGDIDMMIEK 604

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
           D    + Y ++STGA ++  S++ ++  Y S L  ++    +  +I+  H K G    + 
Sbjct: 605 DRQQKS-YTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYII--HPKDGA---FI 658

Query: 936 CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           C+  LP  +P     G   S   LA+Q+     C
Sbjct: 659 CETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 692



 Score =  159 bits (401), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 231/524 (44%), Gaps = 83/524 (15%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------CYE 1403
             P+++ R+ES L+A++  +K+   +P    LEALT  S         Q  F       YE
Sbjct: 1005 FPAMIWRMESYLIALEACEKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYE 1064

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  +I++  
Sbjct: 1065 RLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRS 1124

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +  +D K                                     EG 
Sbjct: 1125 FSRRAWYPEGLTLLKGKDKK-------------------------------------EGP 1147

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPSRP 1579
            +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V      SR 
Sbjct: 1148 NGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRL 1207

Query: 1580 ACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPS--SGVSCYQRLEF 1631
              +P     S     ++ A +I+      FK   LL  A  H S PS  + V CYQRLEF
Sbjct: 1208 YSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEF 1267

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S+ L 
Sbjct: 1268 LGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQ 1327

Query: 1692 RQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             QI  + +E+  ++  ++    ++   + + PK L DIVE+  GAIF+DS  +  VV   
Sbjct: 1328 GQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAIFVDSNFNFDVVDDF 1386

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN----LAT 1794
            F    Q   + M   +T    HP+  L  R      C   A   +      G     LA 
Sbjct: 1387 FRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVRALAA 1446

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            V V+ D V  GVA +P  + A+  A++NAL +L+E   A+ + K
Sbjct: 1447 VCVHDDIVAEGVASSP--RHAKLKASQNALQILEEMSAADFRAK 1488


>gi|17511264|gb|AAK68755.2| Unknown protein [Arabidopsis thaliana]
 gi|20148705|gb|AAM10243.1| unknown protein [Arabidopsis thaliana]
          Length = 391

 Score =  181 bits (458), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 195/355 (54%), Gaps = 15/355 (4%)

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDA 1635
            PS P+    S + S++  A+E  L  KF ++ LL EA+TH S   +    Y+RLEF+GD+
Sbjct: 46   PSAPSVPVSSEMESME--AVEKILNYKFSNKSLLKEAVTHTS--CTDFPSYERLEFIGDS 101

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
             +   I+ +L+ +Y +L P  L+ LRAA V+ E  ARV++ H L+  LR  + +LD +++
Sbjct: 102  AIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVK 161

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            +F + V +E       S+G G  KAPKVL D+ ES+AGA+++D   D   +W +F+ LL+
Sbjct: 162  EFSEAVGKE--DDLSVSYG-GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLE 218

Query: 1756 PMVTPETLPM--HPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
            P+VT + L     PV  L + C +  + ++ K  + GN++   +Y+D   +   +   K 
Sbjct: 219  PIVTLDDLQKQPQPVSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKD 278

Query: 1814 MAQKLAARNALAVLKEKETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            +A+ +AA+ AL  L E    E     DE+  + +    T  +  LN+ICL++ WP P+Y 
Sbjct: 279  IARLIAAKEALRKLSEVFPVEM--VIDEDSVEIQ---LTHAKTKLNEICLKKKWPKPIYS 333

Query: 1874 CVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSAAVLLLELLNK 1928
               +      KRF  + ++  T++  T    G+    +KKA+ S+A  ++  L K
Sbjct: 334  VEEDRSSVQGKRFVCSAKIKITEEK-TLYMKGDEQSKIKKAESSSAYHMIRALRK 387



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 49/219 (22%)

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKIL-EALTAASC 1396
            P    IH    SL   A  +P     V S + +++  +KI NY      +L EA+T  SC
Sbjct: 32   PSSADIHRFYNSLSPSAPSVP-----VSSEMESMEAVEKILNYKFSNKSLLKEAVTHTSC 86

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
             +   YER E +GD+ +   +S +L+L YP      L+ +R   VS   L + +L+ GL 
Sbjct: 87   TDFPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLY 146

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            S+++  R APS           DE  K+   ++                     ++DD+ 
Sbjct: 147  SFLR--RNAPS----------LDEKVKEFSEAVG--------------------KEDDL- 173

Query: 1517 DGELEGDSSSY--RVLSSKTLADVVEALIGVYYVEGGKD 1553
                   S SY   V + K LAD+ E+L G  YV+   D
Sbjct: 174  -------SVSYGGLVKAPKVLADLFESLAGAVYVDVNFD 205


>gi|302511053|ref|XP_003017478.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
 gi|291181049|gb|EFE36833.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
          Length = 1510

 Score =  181 bits (458), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 180/694 (25%), Positives = 292/694 (42%), Gaps = 142/694 (20%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK+KN IA LETG+GKTLIAVLL++ +    Q    + L   L P++   
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLKHVIE--QELTDRSLG--LPPRISFF 167

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
                 I ++    +  +CG M  D W+ + W+  F    V+V TA++L   L HS I++
Sbjct: 168 LNN---IPQK----IDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHSFIQI 220

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V+   
Sbjct: 221 DQINLLIFDEAHHAKKEHPYARIIKDFY-LKEPERKPKIFGMTASPVDAK-----VEVVG 274

Query: 485 KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAA 544
               LE+ LDS + T  +   L + V  P+E + EYD+             +E+  E   
Sbjct: 275 AAKTLEAMLDSQITTASNPALLRQSVTRPTEEIWEYDR-------------LELPFETPL 321

Query: 545 QSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
            S  R+           G  + L +++  S  T S                   LG WC+
Sbjct: 322 YSKLRQK---------FGDIKVLEKIFKFSRETSSS------------------LGSWCS 354

Query: 605 YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF 664
             +    L+     E    +L+ +     +  +     C+     + +  A + + E G 
Sbjct: 355 DWIWSYCLS-----EETLPKLEARSNRPLMKSIPDQSSCDTEAERIREAGAIIKEHEFG- 408

Query: 665 VEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRA 724
                + +   ELL   V+   + +                         +++   D R 
Sbjct: 409 -----DPVANPELLSRKVLLLRDQLLR-----------------------RFKENPDTRC 440

Query: 725 IIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLL 784
           I+F  +   A +L  +F ++ S  +++   L+G  +  +     +      FR+  + ++
Sbjct: 441 IVFTAQRHTARILRDLFKKIGS-QYIRPNLLVGVRSGGDKIGLDIS-----FREQFLNVI 494

Query: 785 VATSVAEE--------GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL------ 830
               V E         G D       +RFDL  T++ YIQSRGRAR   S   +      
Sbjct: 495 AFRKVNESNEYLIPGLGTDFN-----LRFDLYSTLIQYIQSRGRARHMESTVCITYLEVS 549

Query: 831 ------------MIERGNLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISV 875
                       M+ER NL H T +      EE L    K   E   L    D   +I  
Sbjct: 550 LVQTNIFTQFAHMVERNNLMHETAVE-----EEVLTRFCKSLPEDRLLKGTGDIDMMIEK 604

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
           D    + Y ++STGA ++  S++ ++  Y S L  ++    +  +I+  H K G    + 
Sbjct: 605 DRQQKS-YTIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYII--HPKDGA---FI 658

Query: 936 CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           C+  LP  +P     G   S   LA+Q+     C
Sbjct: 659 CETILPEKSPIRGCMGKSASRKLLAKQSAAFETC 692



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 231/524 (44%), Gaps = 83/524 (15%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------CYE 1403
             P+++ R+ES L+A++  +K+   +P    LEALT  S         Q  F       YE
Sbjct: 1005 FPAMIWRMESYLIALEACEKLQLKIPPELALEALTKDSENTEEHGMEQIRFQSGMGKNYE 1064

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  +I++  
Sbjct: 1065 RLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRSRS 1124

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F+   W   G+  +  +D K                                     EG 
Sbjct: 1125 FSRRAWYPEGLTLLKGKDKK-------------------------------------EGP 1147

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV---GCPSRP 1579
            +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V      SR 
Sbjct: 1148 NGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVEKWADYSRL 1207

Query: 1580 ACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPS--SGVSCYQRLEF 1631
              +P     S     ++ A +I+      FK   LL  A  H S PS  + V CYQRLEF
Sbjct: 1208 YSLPNYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEF 1267

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S+ L 
Sbjct: 1268 LGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQ 1327

Query: 1692 RQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             QI  + +E+  ++  ++    ++   + + PK L DIVE+  GAIF+DS  +  VV   
Sbjct: 1328 GQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAIFVDSNFNFDVVDDF 1386

Query: 1750 F----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN----LAT 1794
            F    Q   + M   +T    HP+  L  R      C   A   +      G     LA 
Sbjct: 1387 FRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVRALAA 1446

Query: 1795 VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
            V V+ D V  GVA +P  + A+  A++NAL +L+E   A+ + K
Sbjct: 1447 VCVHDDIVAEGVASSP--RHAKLKASQNALQILEEMSAADFRAK 1488


>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
          Length = 1659

 Score =  180 bits (456), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 223/440 (50%), Gaps = 37/440 (8%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            LL +   + IN  +    IL+A+T  S  + F  ER ELLGDA+LK+  S +L   + + 
Sbjct: 1158 LLQLNPANTINVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEW 1217

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAP-GVLPVFDEDTKDG- 1485
            HEG LT ++ Q+VSN  L   A+  GL   ++  +F P   W  P   +P   + T    
Sbjct: 1218 HEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAV 1277

Query: 1486 -DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---------SYRVLSSKTL 1535
              S+      ++ ++++ T     +  D+ +   E+ G++          S + +  KT 
Sbjct: 1278 NHSARVLYRLTMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTP 1337

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD +EAL+GV     G   +  L+ + G+  ++   +V          + +   +D+   
Sbjct: 1338 ADAMEALLGVCVQTVGMQRSFKLLPYFGMLPKT--HDVLKLLDEKIENQRLRTHIDYREV 1395

Query: 1593 ------HA-LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
                  H+ +E  L  KFKDR  L++A+THAS P++ ++  YQ+LEF+GDAVLD LI+ +
Sbjct: 1396 DGFLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMY 1455

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV------ 1698
            +F     + PG+LTDLR+A VNN   A + V+H LH+++   S++    +  FV      
Sbjct: 1456 IFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQN 1515

Query: 1699 -KEVLEE--LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL- 1754
              E+ ++  LL    +         PK LGD+ ES+  A+FLDSG D +V W+V   ++ 
Sbjct: 1516 KHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMG 1575

Query: 1755 -DPMVTPETLPMHPVRELQE 1773
             + M   E  P+  VR+L E
Sbjct: 1576 NEIMTFTENTPIQIVRQLYE 1595



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP+E     R YQ  +     +KNTI +L TGAGKT IA++ I+ +  DL +   +    
Sbjct: 5   MPQEDDFVPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSIKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEYD 521
           K + +    + ++  LE+  +S + T+       E+ +    P E++V YD
Sbjct: 183 KQIKTVDQVSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYD 233



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 57/402 (14%)

Query: 705  KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
            K++ LI  L K Y+   D +A  ++FV+R  +A VL  V    F++      +    ++G
Sbjct: 361  KIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLKIYFSQTEDADLILPDFMVG 420

Query: 758  HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
             N S      Q+      +  I +F+     ++V T+V EEG+D++ CN VI++D  +T 
Sbjct: 421  SNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTF 480

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
             +Y QS+GRAR   S Y++M+   N     FL   R   + E+ L++    + I R D  
Sbjct: 481  ASYQQSKGRARMKDSQYMVML--NNEERQKFLEKYRLYKSIEQELQRCLIGKTINRPDPL 538

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
               D  + +  + +P       + GA +   SAV L++ YC  +P D ++        ER
Sbjct: 539  D-ADVHKELYNEIIPPF---FTAKGAKLDALSAVQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925  HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             +   G  +   ++ LP  +   EK+ G    +++LA+++    AC+KL+E    ++ L+
Sbjct: 593  VDLKNG--QIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLI 650

Query: 984  PDKGSGEQ--------QEKVDQNDEGEPLPGTAR----HREFYPEGVADILQGEWILSGR 1031
            P     +         +   D +++   L GT +    H   YP+               
Sbjct: 651  PIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTT------------ 698

Query: 1032 DGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSE 1073
             GC        ++Y ++ +  G  +DP    V+ F  L++SE
Sbjct: 699  -GCFPEPGKPCYIYVLR-IGAGFEQDPSNENVNIFHSLYNSE 738



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 1250 YVESIRYE-MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            YV ++ +E +T  S FP  E       Y SYA+Y+ + Y + ++   Q LI  +G++   
Sbjct: 878  YVVTMVHEHLTPGSPFPNAE-------YGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 930

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L+P      E +G+        +   L PELC  +  P      A  LPS + R+  +
Sbjct: 931  NRLNP----GVEDDGKSTRSKHWRFNEILIPELCHNYQFPADYWLKATLLPSALHRIHYL 986

Query: 1369 LLAIQLK 1375
            LLA +++
Sbjct: 987  LLAEKIR 993


>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
 gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
          Length = 1659

 Score =  179 bits (455), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 223/440 (50%), Gaps = 37/440 (8%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            LL +   + IN  +    IL+A+T  S  + F  ER ELLGDA+LK+  S +L   + + 
Sbjct: 1158 LLQLNPANTINVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEW 1217

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAP-GVLPVFDEDTKDG- 1485
            HEG LT ++ Q+VSN  L   A+  GL   ++  +F P   W  P   +P   + T    
Sbjct: 1218 HEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAV 1277

Query: 1486 -DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---------SYRVLSSKTL 1535
              S+      ++ ++++ T     +  D+ +   E+ G++          S + +  KT 
Sbjct: 1278 NHSARVLYRLTMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTP 1337

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD +EAL+GV     G   +  L+ + G+  ++   +V          + +   +D+   
Sbjct: 1338 ADAMEALLGVCVQTVGMQRSFKLLPYFGMLPKT--HDVLKLLDEKIENQRLRTHIDYREV 1395

Query: 1593 ------HA-LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
                  H+ +E  L  KFKDR  L++A+THAS P++ ++  YQ+LEF+GDAVLD LI+ +
Sbjct: 1396 DGFLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMY 1455

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV------ 1698
            +F     + PG+LTDLR+A VNN   A + V+H LH+++   S++    +  FV      
Sbjct: 1456 IFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQN 1515

Query: 1699 -KEVLEE--LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL- 1754
              E+ ++  LL    +         PK LGD+ ES+  A+FLDSG D +V W+V   ++ 
Sbjct: 1516 KHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGMMG 1575

Query: 1755 -DPMVTPETLPMHPVRELQE 1773
             + M   E  P+  VR+L E
Sbjct: 1576 NEIMTFTENTPIQIVRQLYE 1595



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP+E     R YQ  +     +KNTI +L TGAGKT IA++ I+ +  DL +   +    
Sbjct: 5   MPQEDDFVPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSIKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEYD 521
           K + +    + ++  LE+  +S + T+       E+ +    P E++V YD
Sbjct: 183 KQIKTVDQVSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYD 233



 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 57/402 (14%)

Query: 705  KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
            K++ LI  L K Y+   D +A  ++FV+R  +A VL  V    F++      +    ++G
Sbjct: 361  KIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLKIYFSQTEDADLILPDFMVG 420

Query: 758  HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
             N S      Q+      +  I +F+     ++V T+V EEG+D++ CN VI++D  +T 
Sbjct: 421  SNGSMPESIEQILSAKKDRRVIERFKKNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTF 480

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
             +Y QS+GRAR   S Y++M+   N     FL   R   + E+ L++    + I R D  
Sbjct: 481  ASYQQSKGRARMKDSQYMVML--NNEERQKFLEKYRLYKSIEQELQRCLIGKTINRPDPL 538

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
               D  + +  + +P       + GA +   SAV L++ YC  +P D ++        ER
Sbjct: 539  D-ADVHKELYNEIIPPF---FTAKGAKLDALSAVQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925  HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             +   G  +   ++ LP  +   EK+ G    +++LA+++    AC+KL+E    ++ L+
Sbjct: 593  VDLKNG--QIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLI 650

Query: 984  PDKGSGEQ--------QEKVDQNDEGEPLPGTAR----HREFYPEGVADILQGEWILSGR 1031
            P     +         +   D +++   L GT +    H   YP+               
Sbjct: 651  PIDCRNQLHNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTT------------ 698

Query: 1032 DGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSE 1073
             GC        ++Y ++ +  G  +DP    V+ F  L++SE
Sbjct: 699  -GCFPEPGKPCYIYVLR-IGAGFEQDPSNENVNIFHSLYNSE 738



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 1250 YVESIRYE-MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            YV ++ +E +T  S FP  E       Y SYA+Y+ + Y + ++   Q LI  +G++   
Sbjct: 878  YVVTMVHEHLTPGSPFPNAE-------YGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 930

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L+P      E +G+        +   L PELC  +  P      A  LPS + R+  +
Sbjct: 931  NRLNP----GVEDDGKSTRSKHWRFNEILIPELCHNYQFPADYWLKATLLPSALHRIHYL 986

Query: 1369 LLAIQLK 1375
            LLA +++
Sbjct: 987  LLAEKIR 993


>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
          Length = 1625

 Score =  179 bits (455), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 223/440 (50%), Gaps = 37/440 (8%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
            LL +   + IN  +    IL+A+T  S  + F  ER ELLGDA+LK+  S +L   + + 
Sbjct: 1124 LLQLNPANTINVNLQQKDILKAITTKSAADVFDLERYELLGDAFLKFATSLYLIKYHKEW 1183

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAP-GVLPVFDEDTKDG- 1485
            HEG LT ++ Q+VSN  L   A+  GL   ++  +F P   W  P   +P   + T    
Sbjct: 1184 HEGFLTAVKGQIVSNRNLVYCAIKYGLPGMLKVHKFDPKNDWQPPLATVPKNIKQTMQAV 1243

Query: 1486 -DSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS---------SYRVLSSKTL 1535
              S+      ++ ++++ T     +  D+ +   E+ G++          S + +  KT 
Sbjct: 1244 NHSARVLYRLTMTDEEIKTGVVDPKTSDEFIAQLEMHGNTPDPSPMANYLSQQTMGDKTP 1303

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF--- 1592
            AD +EAL+GV     G   +  L+ + G+  ++   +V          + +   +D+   
Sbjct: 1304 ADAMEALLGVCVQTVGIQRSFKLLPYFGMLPKT--HDVLKLLDEKIENQRLRTHIDYREV 1361

Query: 1593 ------HA-LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKH 1644
                  H+ +E  L  KFKDR  L++A+THAS P++ ++  YQ+LEF+GDAVLD LI+ +
Sbjct: 1362 DGFLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGSYQQLEFLGDAVLDFLISMY 1421

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV------ 1698
            +F     + PG+LTDLR+A VNN   A + V+H LH+++   S++    +  FV      
Sbjct: 1422 IFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILAESASFSDTVNKFVMFQEQN 1481

Query: 1699 -KEVLEE--LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL- 1754
              E+ ++  LL    +         PK LGD+ ES+  A+FLDSG D +V W+V   ++ 
Sbjct: 1482 KHEITDQVNLLVEESDRKMAEFVDVPKALGDVFESLVAAVFLDSGNDFAVTWRVIYGIMG 1541

Query: 1755 -DPMVTPETLPMHPVRELQE 1773
             + M   E  P+  VR+L E
Sbjct: 1542 NEIMTFTENTPIQIVRQLYE 1561



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP+E     R YQ  +     +KNTI +L TGAGKT IA++ I+ +  DL +   +    
Sbjct: 5   MPQEDDFVPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSIKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEYD 521
           K + +    + ++  LE+  +S + T+       E+ +    P E++V YD
Sbjct: 183 KQIKTVDQVSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYD 233



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 71/472 (15%)

Query: 705  KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
            K++ LI  L K Y+   D +A  ++FV+R  +A VL  V    F++      +    ++G
Sbjct: 361  KIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLKIYFSQTEDADLILPDFMVG 420

Query: 758  HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
             N S      Q+      +  I +F+     ++V T+V EEG+D++ CN VI++D  +T 
Sbjct: 421  SNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTF 480

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
             +Y QS+GRAR   S Y++M+   N     FL   R   + E+ L++    + I R D  
Sbjct: 481  ASYQQSKGRARMKDSQYMVML--NNEERQKFLEKYRLYKSIEQELQRCLIGKTINRPDPL 538

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
               D  + +  + +P       + GA +   SAV L++ YC  +P D ++        ER
Sbjct: 539  D-ADVHKELYNEIIPPF---FTAKGAKLDALSAVQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925  HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             +   G  +   ++ LP  +   EK+ G    +++LA+++    AC+KL+E    ++ L+
Sbjct: 593  VDLKNG--QIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLI 650

Query: 984  PDKGSGEQ--------QEKVDQNDEGEPLPGTAR----HREFYPEGVADILQGEWILSGR 1031
            P     +         +   D +++   L GT +    H   YP+               
Sbjct: 651  PIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTT------------ 698

Query: 1032 DGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSELDAELAS-------LKNF 1084
             GC        ++Y ++ +  G  +DP    V+ F  L++SE +  + +       L+ F
Sbjct: 699  -GCFPEPGKPCYIYVLR-IGAGFEQDPSNENVNIFHSLYNSENNFGIMTTKPLPVLLRQF 756

Query: 1085 HVRLMSIVLDVDVEPYTTPWDPA-KAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            H+ +   VL +  +     +D    +++ VP+   KS      LDW+L+ + 
Sbjct: 757  HITVFRDVLRLWKDFLVYDYDNGINSFMVVPL--KKST----HLDWELIRQF 802



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 1250 YVESIRYE-MTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            YV ++ +E +T  S FP  E       Y SYA+Y+ + Y + ++   Q LI  +G++   
Sbjct: 844  YVVTMVHEHLTPGSPFPNAE-------YGSYANYFSEAYHLAVVKPDQFLIEVKGITSYL 896

Query: 1309 NLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESM 1368
            N L+P      E +G+        +   L PELC  +  P      A  LPS + R+  +
Sbjct: 897  NRLNP----GVEDDGKSTRSKHWRFNEILIPELCHNYQFPADYWLKATLLPSALHRIHYL 952

Query: 1369 LLAIQLK 1375
            LLA +++
Sbjct: 953  LLAEKIR 959


>gi|338858670|dbj|BAK42745.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858672|dbj|BAK42746.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858674|dbj|BAK42747.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858676|dbj|BAK42748.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858678|dbj|BAK42749.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858680|dbj|BAK42750.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858682|dbj|BAK42751.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858684|dbj|BAK42752.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858686|dbj|BAK42753.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858688|dbj|BAK42754.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858690|dbj|BAK42755.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858692|dbj|BAK42756.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858694|dbj|BAK42757.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858696|dbj|BAK42758.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858698|dbj|BAK42759.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858700|dbj|BAK42760.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858702|dbj|BAK42761.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858704|dbj|BAK42762.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858706|dbj|BAK42763.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858708|dbj|BAK42764.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858710|dbj|BAK42765.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858712|dbj|BAK42766.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858714|dbj|BAK42767.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858716|dbj|BAK42768.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858718|dbj|BAK42769.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858720|dbj|BAK42770.1| CAF [Arabidopsis halleri subsp. gemmifera]
 gi|338858722|dbj|BAK42771.1| CAF [Arabidopsis halleri subsp. gemmifera]
          Length = 262

 Score =  179 bits (455), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/315 (43%), Positives = 177/315 (56%), Gaps = 61/315 (19%)

Query: 45  SVDNTSNQDSLSNDFFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLIL 104
           +V+ +++ + + NDFFGGIDHILDSIKNG GLPN       NG  D+    N Q      
Sbjct: 4   AVNESTDDNGVINDFFGGIDHILDSIKNGGGLPN-------NGVSDT----NSQ------ 46

Query: 105 LSNNGSDKDGVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRI 164
                                 +N   V  K   +      KENG+ + NG   +E S  
Sbjct: 47  ----------------------INEVSVTPKVIAKEVTVSVKENGLQK-NGGKRNELS-- 81

Query: 165 RDFDSEDRFSKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRDPMR 223
           ++   +DR  KRARV   ++E S  S RGQ  S ++DR   RKR R+ D+ G       +
Sbjct: 82  KEEGEKDR--KRARVCSYQSERSNLSGRGQVNSRERDRFMNRKRPRNWDEAGNN-----K 134

Query: 224 RREHYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQ 283
           +RE YN       R+          YWERD++GSN +V+R G+WEADH R  K+ +G N+
Sbjct: 135 KRECYNYRRDGRDREGRG-------YWERDKVGSNELVYRSGTWEADHERDVKKESGRNR 187

Query: 284 ECNGKV----GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR 339
           EC+ KV     K  E KEK+ EEQAR YQLDVLEQAK KNTIAFLETGAGKTLIA+LLI+
Sbjct: 188 ECDVKVEENKSKPEERKEKVVEEQARRYQLDVLEQAKAKNTIAFLETGAGKTLIAILLIK 247

Query: 340 SICNDLQRQNKKMLA 354
           S+  DL  QN+KML+
Sbjct: 248 SVHKDLMSQNRKMLS 262


>gi|392568586|gb|EIW61760.1| ribonuclease III [Trametes versicolor FP-101664 SS1]
          Length = 1232

 Score =  179 bits (455), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 181/630 (28%), Positives = 284/630 (45%), Gaps = 79/630 (12%)

Query: 1248 RFYVESIRYEMT----AESSFPRKEGYLGPLEYSSYADYYKQKY----GVELIFKKQPLI 1299
            R ++ ++R+++T    AE S PR+       E+ S+ +Y K +     G+E   +KQP+I
Sbjct: 582  RHFLVTVRHDLTPLSKAEDS-PREA------EFPSFLEYCKARRKDFPGLE--DEKQPMI 632

Query: 1300 RGRGVSYCKNLLSPRFEHSEEQEGEGEEIL--DKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
                V    N L P             + L  + TY   +P      H  P S  R    
Sbjct: 633  EVSAVPAVINNLHPMSTPPTPPAKAPLKYLIPELTYKFTIPAR----HVAPYSTFRTLWL 688

Query: 1358 LPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWV 1416
            LPS+M +V+S LL  +L  K+ ++ +   ++L AL+  +    F YER E LGDA+LK +
Sbjct: 689  LPSVMTKVDSCLLVKELDAKLFHHSISEQQLLIALSTRAAWTEFNYERLEFLGDAFLKVI 748

Query: 1417 VSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV-L 1475
             S FL++  P   EG L  +RQ ++ N VL++ A+  G+  ++Q  RF    W  P +  
Sbjct: 749  ASNFLYVTMPTAGEGTLHNVRQSIIGNKVLHECAMRVGICPFVQHKRFVAKLWQPPHIPA 808

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTL 1535
            P   E  +D + +  +      E K    K+  E         +L   +  +  +  K +
Sbjct: 809  PTATEPNEDVEMADGEGTGDGGEGKGNRKKSKKER--------QLSAQNRLW--MGDKVV 858

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVE-----SDPEEVGCPS----RPACVPESV 1586
            ADVVEA++   ++ GG + A    + + I +      +D   +G         A    + 
Sbjct: 859  ADVVEAILAAAFLSGGHEGALQAARRLQIPLPNIAQWTDFTRIGAQQGEQDAGAGAAGAF 918

Query: 1587 LRSVDFHALEDALKIKFKDRGLLVEAITHASR-PSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            +      A++  +   F    LL +A+TH S   SS  + Y+RLEF+GDA+LD L+ +H+
Sbjct: 919  VLDDTVEAVQAIVGSVFSKPELLAQALTHGSAFGSSEGASYERLEFIGDAILDFLVARHI 978

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-- 1703
            F  + +L PG LT L+   V+N   A   V   LH HL   S  L   I+ +V  + E  
Sbjct: 979  FQRHPHLSPGGLTLLKGGMVSNRALAAFCVTTGLHRHLHFASDQLADSIQRYVTSLTELR 1038

Query: 1704 ---------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ----VF 1750
                     E   PG     L   + PK L D+VESI GA+++  G     V +    VF
Sbjct: 1039 EKEYEAVAREQRLPGQYWLDL-PLEPPKCLSDLVESILGALYVCDGFFEVGVGRFFDAVF 1097

Query: 1751 QPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKA------SRSGNLATVE-------V 1797
            +P +D  V  +TL  +P   L E    QAEG    A       R   L  +E       V
Sbjct: 1098 KPFMDAHVRLQTLSTNPKVTLLELL--QAEGCRQHAVVKLPQDRQNALVHMEGEYRSCVV 1155

Query: 1798 YIDGVQVGVAQNPQKKMAQK---LAARNAL 1824
            ++ G  +  A +P   +A +   LAA +AL
Sbjct: 1156 HVHGQVIASATDPTAAIATRKVSLAALDAL 1185



 Score = 50.8 bits (120), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 23/286 (8%)

Query: 702 VTPKVQSLIKILLKYQHT-EDFRAIIFVERVVAALVLPKVFA-ELPSLSFVKSASLIGHN 759
           +TPK+  L+++L  Y  +   FR ++ V+    A  L K+   +   L F+++   + H 
Sbjct: 86  ITPKLAKLVEVLSSYDGSGSGFRGVVLVKDRAIARTLSKLLQRQEIGLPFIRAVE-VEHA 144

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            + +  ++Q+  T A F  G+  LLV T    + ++    + VI FDL +  L Y     
Sbjct: 145 AASD-PSYQLNLTRA-FGGGQYNLLVLTRTTAD-IEFPPASTVISFDLFEDQLTYAHCHA 201

Query: 820 RARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSRLISVDA 877
           R +   S  + +IE+GN      L   +  +  LR         D  H+  ++   +++ 
Sbjct: 202 RGKGRHSHMLFLIEKGNNEQRKILTRVQMVDADLRGWIAGFVGGDSKHMPPSTTHTTLEP 261

Query: 878 V---------PGTVYQVESTGAVVSLNSAVGLIHFYCSQL--PSDRYSILRPEFIMERHE 926
                      G      +T A +  + A   IH   +    P+     L P   +ER  
Sbjct: 262 CLSDSDGEEEDGEFVLDPTTSAHLHKSEAEAAIHRLVAGFEDPTGATQDL-PSVSLER-- 318

Query: 927 KPG-GPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKK 971
           KPG G   Y   + LP +     + GP C +   A++     AC++
Sbjct: 319 KPGQGAQSYRYTISLPTSFGIPGVVGPYCPTKTQARREAFYKACEE 364


>gi|299747526|ref|XP_001837094.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
 gi|298407559|gb|EAU84711.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
          Length = 1499

 Score =  179 bits (455), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 246/544 (45%), Gaps = 55/544 (10%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAAS 1395
            L PELC    +P S+ R +  +PSI+ +++ + +  +L  +  +  +    +  A T  S
Sbjct: 923  LIPELCAKCTIPASMFRTSYLIPSILWKLDHLFVVKELNMQFFDNAIDEELLYMATTTVS 982

Query: 1396 CQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
             +    YER ELLGDA+LK++ S  +F+  P ++EG L   RQ+++SN  L   A   GL
Sbjct: 983  AEMEHNYERLELLGDAFLKYLASVVVFVMNPTQNEGSLHVARQRLISNKALLACATQVGL 1042

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGD---SSLFDQE----KSVAEDKLGTDKNYN 1508
             +YI +  F    W  P     F E +K  D   + + +QE    K+ A+++   +    
Sbjct: 1043 PAYICSKPFLLRGW-RPWPSASFTEISKAPDKPGTGVAEQEVDTCKARAQNESAGESQTP 1101

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSS----------------------KTLADVVEALIGVY 1546
               D D +D + E +  +    S                       K +ADV EA+IG  
Sbjct: 1102 PSADHDKQDSDQEVEEGAKTESSQKKRKRKKWKDPMNQNLQNLGDKKAIADVTEAIIGAA 1161

Query: 1547 YVEGGKDAANHLMKWIGIQVE--SDPEEVGCPSRPACVPESV-LRSVDFHALEDALKIKF 1603
            YV GG++ A  + K + I +   +   ++G         +++ LR     A+E  +  +F
Sbjct: 1162 YVSGGRETALDVAKALSIPIPGINTWSDLGMQVVIPFTTDAIELRPGSIEAVEGIIGHRF 1221

Query: 1604 KDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            +   LL + +TH S   S V  Y+RLEF+GDA+LD ++ +H+F     L PG LT L+ A
Sbjct: 1222 QQPHLLAQILTHTSVHGSKVLTYERLEFIGDAILDFMVIRHIFDRERTLSPGGLTMLKGA 1281

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK-----------PGFNS 1712
             V N   A V +   ++ HL  GS  L   I D+ + + E   K           PG   
Sbjct: 1282 MVANSTLATVCILSGIYKHLVFGSYQLSSAIEDYAEAINERADKEYALAEQENRMPG--Q 1339

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGR----DTSVVWQVFQPLLDPMVTPETLPMHPV 1768
            F   D + PK L D++ESI GA+++          +   +V +P  D  ++  TL  HP 
Sbjct: 1340 F-WPDIEPPKALSDVIESIIGALYISDNFCPVGTEAFFDKVLRPFFDKHISLRTLTHHPT 1398

Query: 1769 RELQERCQQ---QAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
            + L E  Q    Q   L     + G   + E+ +       A +    +A + A+  AL 
Sbjct: 1399 KTLFEYIQAHGCQQLKLSKGPQQKGGKMSCEILVHETVCASASDVSLSVAAREASTRALD 1458

Query: 1826 VLKE 1829
              KE
Sbjct: 1459 RFKE 1462



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 122/293 (41%), Gaps = 52/293 (17%)

Query: 722 FRAIIFVERVVAALVLPKVFAELPS--LSFVKSASLIGHNNSQEMRTFQMQETIAKFRDG 779
           FRA+IFV+R   AL L ++   LP     F+   S+ G +     R    QET   F  G
Sbjct: 396 FRAVIFVQRKSTALALAEIIKHLPDGRFKFISPCSVFGKS-----RLETQQETFTNFASG 450

Query: 780 RVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSH 839
              LLV T  A E LDI +  VV+RFDL  +   Y Q +  AR   S  I ++ER N SH
Sbjct: 451 VYNLLVVTRSAME-LDIPKATVVVRFDLMDSQFLYGQIKACARGRESHLIHLVERHNDSH 509

Query: 840 ATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA------------------VPGT 881
              L NA +  E L     E  D   L+D   L+   A                   P  
Sbjct: 510 RRILSNAASDAERL----FEWFD--GLRDPEGLVVPPANLKESSMSYYSESDEDIDKPDY 563

Query: 882 VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE----------KPGGP 931
           V    + G +   ++ V L+ F          S LR +  +E              PG P
Sbjct: 564 VSAATTGGRLYPQDAIVTLVKF---------ASYLREQGYLEAGHSLFEYQSIPANPGQP 614

Query: 932 TEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            +++CK+ LP   P + +      +  ++++A   +ACK+L  +G     ++P
Sbjct: 615 LQFACKISLP-GTPVDGMVSAPEMTKTISRRAAAFSACKRLASLGLLDYRIVP 666



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 40/288 (13%)

Query: 272 NRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKT 331
            R  K   G N E   K   +  A     E      +  +L+ AK  NTIA+L   +   
Sbjct: 22  QRPAKHFKGENDESIRKRLPELAAGAAYAESDIDELRSSILDTAKHSNTIAYLPKSSN-- 79

Query: 332 LIAVLLIRSICNDL----------QRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGH 381
                 I  IC D              + + +++F+V     +   A  I++    V+  
Sbjct: 80  ------IDPICYDFLCWAVDASRSHPADPRRVSLFVVENESSLDAHALFIQKTIPDVICF 133

Query: 382 YCGEMGQDFWDAQRWQREFDT--KQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAV 439
            C        DA +  +  +     V+V T+Q LL +    ++++  + ++I+++  H V
Sbjct: 134 TCTS------DALKRDKSLNLLGHDVIVTTSQTLLELFSKDLVQLRQVQVVIIEDAQH-V 186

Query: 440 KKH------PYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKL 493
           K H      P    M  FY      +RP +F +  SP   +         ++I  L SK 
Sbjct: 187 KAHDCYSFLPIVQFMRLFYSPCPAYERPRLFSLVLSPDLAQHPFDSRSLKLEI-TLHSKT 245

Query: 494 DSVVCTIKDRKELEKHVPMPSEVVVEYDKAASL----WSLHEQLKQME 537
             V  T + R E+      P+EVVV YDK+ASL     SL  QL+ ++
Sbjct: 246 YGV--TEEKRTEIIDLPDRPNEVVVLYDKSASLETTFSSLPSQLRALD 291


>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
 gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
          Length = 1665

 Score =  179 bits (453), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 228/460 (49%), Gaps = 40/460 (8%)

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDA 1411
            V GA    S+  +    LL +  ++ +  P+    I++ALT  S  + +  ER ELLGDA
Sbjct: 1149 VAGAILDMSLDEKFRIALLKLTPENTVYVPLQQCAIIKALTTKSAHDVYDLERYELLGDA 1208

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WA 1470
            +LK+ VS FL  K+ + HEG LT ++ Q+VSN  L   A+   L   ++   F P   W+
Sbjct: 1209 FLKFSVSLFLVKKHKEWHEGHLTAVKGQLVSNRNLLYCAMLINLPGMMKIHTFDPKNDWS 1268

Query: 1471 APGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK-NYNEYEDDDMED--GELEGDSSSY 1527
             P  L       K   +S+    + + + K+  ++      E D  ED   EL+  S S 
Sbjct: 1269 PP--LASVPHAVKQKMASINHSARVLYKLKMSEEEIQAGTIEKDKYEDFIAELDVQSRSL 1326

Query: 1528 -----------RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD------P 1570
                       + +  K  AD +EA++GV     G   +  L+ ++GI  + +       
Sbjct: 1327 DTSPMQNYLSQQAMGDKMPADSMEAMLGVCVSTVGIKRSFRLLSFLGILPKKENLTTLLD 1386

Query: 1571 EEVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQ 1627
            + +      A V ++ + S  +    +E  L   FKDR  L++A+THAS P++ ++  YQ
Sbjct: 1387 DRIANQRLKADVTKNEVDSFLISPGRIERILDYTFKDRTYLLQALTHASYPTNRITGSYQ 1446

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            +LEFVGDAVLD LI+ +++     + PG+LTDLR+A VNN   A + V+H LH+++   S
Sbjct: 1447 QLEFVGDAVLDFLISAYIYEQNPTMSPGQLTDLRSALVNNITLACILVRHGLHLYILSES 1506

Query: 1688 SALDRQIRDFV--KEVLEELLKPGFNSFGLGD--CK--------APKVLGDIVESIAGAI 1735
            ++L   +  FV  +E  +  +    N        C+         PK LGD+ ES+ GA+
Sbjct: 1507 ASLTDTVSKFVAFQEAHKHEITDQVNLLSEESERCQGAMAEFVDVPKALGDVFESLIGAV 1566

Query: 1736 FLDSGRDTSVVWQVFQPLLDPMVTPETL--PMHPVRELQE 1773
            FLDSG D  V W+V   L+   +   ++  P+  VR L E
Sbjct: 1567 FLDSGNDLEVTWRVIYGLMHHEIATFSVETPIQIVRRLYE 1606



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 10/202 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC------NDLQRQNKKMLAVFLV 358
           R YQ  + +    KNTI +L TGAGKT IA++ IR +         L +  K+    F+V
Sbjct: 15  RFYQSQMKDVCIAKNTIVYLPTGAGKTHIALMAIRELGRRGHLEKPLSQGGKRTF--FIV 72

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
             V L  QQAE+I     +    Y  +   D W   RW  EF   Q++V T QILL++L+
Sbjct: 73  NTVALAKQQAEMIGRNVVFKTSVYTSDRDVDTWKQDRWLEEFAKYQIIVCTCQILLDVLK 132

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
           H  + M  INLL+ DECHH V  HP   +M + Y    KE RP V G++   +  K +  
Sbjct: 133 HGYLAMSHINLLVFDECHHGVGDHPMHGIMEQ-YLRARKEDRPRVIGLSGMLL-YKELKM 190

Query: 479 QVDCAIKICNLESKLDSVVCTI 500
           +   A ++  LE+  DS + T+
Sbjct: 191 KEQVAQELERLENTFDSTIATV 212



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 33/283 (11%)

Query: 723 RAIIFVERVVAALV----LPKVFAELPSLSFVKSASLIGHNNSQEMRTFQM------QET 772
           + +IFV+R  +A V    L   F+E  +   +    ++G N +      Q+      +  
Sbjct: 385 KTLIFVQRRFSAKVVYHLLKIYFSETENAETILPDFMVGCNGTMPESIEQILSAKKDRRV 444

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +F+     ++V T+V EEG+D++ CN VI+FD  +T  +Y QS+GRAR   S Y +M+
Sbjct: 445 LERFKKNETNVIVTTNVLEEGIDLQMCNSVIKFDYPETFASYEQSKGRARMKDSTYTVML 504

Query: 833 ERGNLSHATFLRN---ARNSEETLRKEAIERT---DLSHLKDTSRLISVDAVPGTVYQVE 886
           +        FL+     +  EE LR+  + +T         D ++ ++ + +P    +  
Sbjct: 505 DSDK--REKFLKKYLLYKEIEEELRRALVGKTINRPEPLEADVTKELTNELIPPFYTK-- 560

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
             GA +   S++ L++ YC  +P D ++        ERH+      +Y+ K+ +    P 
Sbjct: 561 -KGAKLDALSSIQLLNRYCMGMPRDAFT--NTNVTWERHDD-----KYTGKIVVAVLLPL 612

Query: 947 E-----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +     K+ G   ++++LA+++    AC+KL+E G   D L+P
Sbjct: 613 QSTVRDKVFGQPMTNVKLAKRSAAFEACRKLYEAGELNDHLIP 655



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            + + V ++   +T  S FP ++       Y +Y DY+   YG ++  KKQ LI  +G++ 
Sbjct: 879  RAYVVTAVHEHLTPGSPFPNEK-------YQTYEDYFGTVYGQQICNKKQFLIEVKGITT 931

Query: 1307 CKNLLSPRFEHSEEQEGE-GEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRV 1365
              N LSP     +E +G+      + T++  L PELC     P      A  LPS + R+
Sbjct: 932  WLNRLSP----GDEDDGKSATRAKNWTFHEILIPELCHNFAFPADYWLKATLLPSALHRI 987

Query: 1366 ESMLLA 1371
              +LLA
Sbjct: 988  NFLLLA 993


>gi|350630584|gb|EHA18956.1| hypothetical protein ASPNIDRAFT_42773 [Aspergillus niger ATCC 1015]
          Length = 1498

 Score =  178 bits (452), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 191/692 (27%), Positives = 289/692 (41%), Gaps = 171/692 (24%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK +NTIA L+T   K L          ND        +A FLV  V L 
Sbjct: 118 REYQLELFERAKVQNTIAVLDTE--KEL----------NDRVEGKPHRIAFFLVDSVTLA 165

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           YQQA V+R      VGH+ G MG D W    W + F    V+V TA+IL   L +S IKM
Sbjct: 166 YQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWDQHFQKNMVIVCTAEILNQCLLNSYIKM 225

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
             IN+LI DE HH  K HPY+ ++ + Y      KRP +FGMTASP++ KG     D   
Sbjct: 226 SQINILIFDEAHHTKKDHPYARIIRDSYLEEVYSKRPRIFGMTASPIDTKG-----DIVD 280

Query: 485 KICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK-----AASLWS-LHEQLKQMEV 538
           +   LE  LDS + T  +   L + V  P E V  ++K     A SL+  L ++   M  
Sbjct: 281 EATRLEKLLDSRIATTSNMSLLRQVVRRPVERVWSFNKLEQPFATSLYKHLEDRFGDM-- 338

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
               A      R  WQ                                        A  E
Sbjct: 339 ----ACLEGIFRFAWQ----------------------------------------ASSE 354

Query: 599 LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
           LG+WC+    +++  AL +D               L K         +EG+V +K A   
Sbjct: 355 LGRWCS---DRAWARALADD--------------VLPK---------LEGSV-RKTANSE 387

Query: 659 DSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
            S N   E    EI    E  E++ S+  S  E            G+++PKVQ L + L 
Sbjct: 388 TSSN-VPESAYKEILRITEASEIVKSYAFSSPETF----------GQLSPKVQVLREELA 436

Query: 715 KY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM---RTFQM 769
           +Y  + TE  + I+F ++   AL+L ++F  L  + F++   LIG  +        TF+ 
Sbjct: 437 RYFGRQTET-KCIVFTQKRYTALILAELFQTL-DIPFLRPGVLIGVRSGDLAGMNITFRQ 494

Query: 770 QE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
           Q  ++ KFR G +  LV T +    L + Q  +                         +Y
Sbjct: 495 QFISLVKFRTGEINCLVNTHIC---LPVYQLLI-------------------------NY 526

Query: 829 ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV------ 882
             M+ERGNL H   L   +++E+ +  ++  RT    L +   L   D    TV      
Sbjct: 527 ASMVERGNLEHEQRLLEVQDAEKIM--QSFCRT----LPEDRLLYGFDHDLDTVLQKDEG 580

Query: 883 ---YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE--YSCK 937
              ++++STGA ++ +SA  ++  Y S L  ++    +  +++        P    + C+
Sbjct: 581 NRTFRIKSTGAKLTYHSATAILARYASSLQYEKEFSAQVTYVV-------LPINGAFVCE 633

Query: 938 LQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
           + LP  +P   L G       +A+++     C
Sbjct: 634 VILPEKSPIRGLTGSPAMKKSIAKRSAAFDTC 665



 Score =  157 bits (397), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 160/607 (26%), Positives = 255/607 (42%), Gaps = 118/607 (19%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL        ++  + E  ++   ++ + P    +  +P S     
Sbjct: 926  QPVLRAELVRLRRNLL--------DKMTDTERDVETRCFICIEP--LKVSAIPASTAFSC 975

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+++ L+++Q  + +N+ V     LEA T  S        Q+          
Sbjct: 976  LAFPAIISRIDAYLISLQGCESLNFTVKLDLALEAFTKDSDNTDEHRAQQIHVQRGMGRN 1035

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 1036 YERLEFLGDCFLKMATSISLFTQNPDDDEFDYHVNRMCLICNKNLFNAAVDKEIYKYIRS 1095

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                         KL   K+++            +
Sbjct: 1096 RGFSRHTWYPEGL-------------------------KLLQGKDHSR-----------K 1119

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA- 1580
              + S   L+ KT+ADV EALIG   + GG D          + V++    V  PS  A 
Sbjct: 1120 ATTESKHALAEKTIADVCEALIGAALLSGGPDHR------FDMAVKAVTTLVNSPSHKAE 1173

Query: 1581 ---------CVPESVLRSVD------FHALEDALKIKFKDRGLLVEAITHASRPSS--GV 1623
                      +P+   R+ D         LE+ L  +F+   LL  A TH S PS+   V
Sbjct: 1174 RWKDYISFYTIPKYQRRAADGAELYLSRKLEEKLSYRFRYPTLLGSAFTHPSYPSAWAKV 1233

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GD+++D +  + LF  + +  P  LT+ + A V+N+    +AVK  LH HL
Sbjct: 1234 PCYQRLEFLGDSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHL 1293

Query: 1684 RHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKV----------------LGD 1726
            ++ S+ L  QI  + +E+   E    G   +       PKV                L D
Sbjct: 1294 KYFSAPLQSQITQYAEEIQTAEGESEGAVDYWTVTKDPPKVMTPSALRNTANVDGQCLPD 1353

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLP-MHPVRELQER------- 1774
            +VE+  GA+F+DS  +  V+ + F    +P  + M   +T    HP   L  R       
Sbjct: 1354 MVEAYVGAVFVDSDFNFEVIERFFRDYIKPFFEDMAIYDTFANKHPTTFLHNRLTNEFGC 1413

Query: 1775 ---CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
               C +  E      + +G LA V V+   +  G A +   + A+  A+  ALAVL E  
Sbjct: 1414 VNYCLKAGEMPSIDGAPAGVLAAVIVHDVVIAEGTATS--GRYAKVKASEKALAVLDEIS 1471

Query: 1832 TAEAKEK 1838
            +AE + K
Sbjct: 1472 SAEFQRK 1478


>gi|413918887|gb|AFW58819.1| hypothetical protein ZEAMMB73_957371 [Zea mays]
          Length = 511

 Score =  178 bits (452), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 214/480 (44%), Gaps = 64/480 (13%)

Query: 723  RAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQETIAKFRDGRV 781
            + I+FV+R++ A V+ ++   L  L F +   L+G H+  + M   +M   I KF  G V
Sbjct: 2    KCIVFVKRIIVARVVVQILQNLKCLDFWRCEFLVGCHSGLRNMSRDKMSSIIEKFSSGEV 61

Query: 782  TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHAT 841
             LLVATSV EEGLDI+ C +V+RFDL +TV ++IQSRGRAR   S Y+ ++ERGN S   
Sbjct: 62   NLLVATSVGEEGLDIQTCCLVVRFDLPETVNSFIQSRGRARMSKSKYVFLLERGNHSQEK 121

Query: 842  FLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLI 901
             L +    E  + KE   RT              + +   +Y+V  TGA +S   +V L+
Sbjct: 122  LLDDYITGEIIMDKEINLRTSNDMF---------NCLEENIYRVNDTGASISTACSVSLL 172

Query: 902  HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQ 961
            H YC  LP D + +  P       +   G     CKL LP NA F ++ G  C S   A+
Sbjct: 173  HRYCDNLPRDIFFVPSPS--FFFVDDVDGIV---CKLILPPNAAFRQVNGQPCPSKDEAK 227

Query: 962  QAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADI 1021
            +  CL AC KLHE+GA TD LLP +GS + +     N E       +   E Y   +  +
Sbjct: 228  RDACLKACIKLHELGALTDFLLPGQGSRKIKVSTTNNSESNKDDDESFREELYEMLIPAV 287

Query: 1022 LQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLF----SSELDAE 1077
            L+          C     F L  Y ++ +   I  D        F +      S +LD E
Sbjct: 288  LRPSR-------CKLDSSFKLHFYYIEFI--PIPADRRYQMFGLFVINRLPEESEKLDVE 338

Query: 1078 L---------ASLK----------------NFHVRLMSIVLD-VDVEPYTTPWDPAKA-- 1109
            L         A +K                NF    + ++LD  +  P         A  
Sbjct: 339  LHLARARIVKAGIKYLGKIEFNKEEMILAHNFQEMFLKVLLDRSEFTPSYILLGNDGALD 398

Query: 1110 -----YLFVPVVSDKSVDPMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNE-RTLGG 1163
                 YL +P+      D  N +DW  V++   + A+ +P+  +  D YL     + LGG
Sbjct: 399  MDSTFYLLLPIKQKFYGD--NMIDWPAVKRCLSSPAFQDPMGLSLHDSYLPNESLKLLGG 456


>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
          Length = 1447

 Score =  178 bits (451), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 180/711 (25%), Positives = 311/711 (43%), Gaps = 107/711 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQ ++ +Q+ ++N I  ++TG+GKT +AVL IR+   +++R + K +  FL P V L
Sbjct: 65  ARAYQTEMFDQSMRQNIIVAMDTGSGKTQVAVLRIRA---EVERTSSKHIVWFLAPTVSL 121

Query: 364 VYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSI 421
             QQ  V++ Q   V +    G+   D W  QR W       +++V T QILL+ L H+ 
Sbjct: 122 CAQQFAVLQSQIPEVQIKFLSGDDNVDSWSDQRTWDEVLHNVRIVVSTYQILLDALSHAF 181

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNLKGVSSQ 479
           ++ME ++L++ DE H+ + K P S +M+ FYH    + R  P + G+TASP       S+
Sbjct: 182 VRMERLSLIVFDEAHNCIGKSPGSKIMTVFYHEEKGKGRYTPHILGLTASPT----FGSK 237

Query: 480 VDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVE------YDKAASLWSLHEQ 532
           V+    I  LE+ LD+V       R +L   V  P+   +       YD   SL SL + 
Sbjct: 238 VE---GINALEATLDAVCKSPTVHRSDLLACVKKPTMTYISFQPHRCYDPPGSLQSLRKA 294

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
           ++ +++  +              +  +  G +   R +    E  ++     +    R  
Sbjct: 295 IRSLDILDDP-----------HILHLQSEGTERSQRALMVALESHDTWIQNQMTSFGRQA 343

Query: 593 NYALGELGQWCA----YKVAQSFLTAL--QNDERANYQLDVKFQESYLSKVVSLLQCELV 646
           N    +LG W A    + V   F+ AL  Q+     ++ D   ++ YL+K+++ ++C+  
Sbjct: 344 NQIFNDLGPWAAEYYIWVVKSRFMAALRSQSISLNTWKDD---EKEYLAKILNQVECQCP 400

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
                                     EE                  IG  V   KV   +
Sbjct: 401 P-------------------------EE-----------------TIGGDVLSEKVFLLI 418

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQ--- 762
           + L+      Q   D   ++FV       VL  + A    L +  +  +++G +  Q   
Sbjct: 419 EQLL------QDKTDIMGVVFVRERATVSVLCHLLASHKLLRARYRMGAMVGTSQFQARK 472

Query: 763 ----EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
               ++   +  +++ +FR+G+  LL+ATSV EEG+D+  CNVVI FD    + ++IQ R
Sbjct: 473 RDIWDLSRSEDLQSLHQFRNGKTNLLIATSVLEEGIDVPACNVVICFDYPPNLKSFIQRR 532

Query: 819 GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAV 878
           GRAR   S  +++ +    +   +   A  +E   + E  ER +L HLK+       +  
Sbjct: 533 GRARMKDSKLLMLHDSSESAPKEW--AALEAEMKSQYEEKER-ELEHLKEVE---DTEES 586

Query: 879 PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
              ++ +  TGAV+   +A   +   C  L    +   RP++I+++      P +    +
Sbjct: 587 TEMIFVINQTGAVLDPENAKQHLDHLCRILSPGEFIDWRPDYIIKKLGAVDAP-DIRATV 645

Query: 939 QLPCNAP--FEKLEGPVC-SSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
            LP   P      E  +   S + A +     A   L++ G   D LLP K
Sbjct: 646 VLPSYLPSHVRTAESQMAWKSEKNATKDAAFQAYVGLYKAGLVNDNLLPFK 696



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 230/572 (40%), Gaps = 96/572 (16%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H  + E        K Y    P     +  +P    +    +PSI+  +E+ L+A +L
Sbjct: 900  FLHRPQSEPGQSPSSSKPYSRVYPMPWAKVDTIPAKYAQFGVLIPSILHHIETRLVAREL 959

Query: 1375 KDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
               +  P+  S    IL A++  S  E   YER E LGD+ LK+  +  +    PQ  E 
Sbjct: 960  SLGLLRPLAISDLSLILTAISTGSASEPTNYERIEFLGDSILKFSATINVAALNPQWPER 1019

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
             L+  +  +VSN  L + A+  GL  YI    F   +W      P++            D
Sbjct: 1020 LLSFHKDAIVSNSTLCKAAVKHGLDRYILTKPFTGQKWR-----PIY-----------VD 1063

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
               S  EDK                         S R +S+KTLAD+VEALIG   ++GG
Sbjct: 1064 SVLSRGEDK-------------------------SMRKMSTKTLADIVEALIGASMIDGG 1098

Query: 1552 KDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
             D A   M     Q+     +    +     P  V        LE  +  KF  + LL++
Sbjct: 1099 LDKALKCMSIFLQQINWRTLDACRLALYNFSPPDVELPSTLEPLEHLIGYKFDRKTLLIQ 1158

Query: 1612 AITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            A+THAS    +   C +RLEF+GD+VLD+++   LF     LP   +  L+ A VN +  
Sbjct: 1159 AMTHASFNLGNPFGCLERLEFMGDSVLDYVVVNRLFAVEPPLPHQTMHLLKTAMVNGDFL 1218

Query: 1671 ARVAVKHK--------------------------LHVHLRHGSSALDRQ----------I 1694
              ++++                            L   +RH S A+  +          +
Sbjct: 1219 GFLSLEQSIGQDEVVLGENTGKEPNLQHSRFSLPLWKFMRHQSPAIGLEQINVHKRYTAL 1278

Query: 1695 RDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL- 1753
            RD + + +E      +    L   +  K   DI ES+ GA+++DSG D  V  +V +   
Sbjct: 1279 RDQIIDSMER--GKTYPWALLARIQLRKFYSDIFESLLGAVYVDSG-DLGVCARVVERFG 1335

Query: 1754 ----LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV-YIDGVQVG--- 1805
                LD ++      +HP  EL     ++       A ++G+ A  E  Y+  V VG   
Sbjct: 1336 ITGYLDRILRDGVHVLHPKEELGHLADKEKVTYVLNARQAGDDAAEEKEYLCRVLVGTRC 1395

Query: 1806 ---VAQNPQKKMAQKLAARNALAVLKEKETAE 1834
               V     ++  +  AA  A+ +LK ++ AE
Sbjct: 1396 VVEVDGGVTREEVKVKAAEAAVNILKAEKIAE 1427


>gi|41469334|gb|AAS07190.1| putative ribonuclease III, 5'-partial (with alternative splicing)
            [Oryza sativa Japonica Group]
          Length = 538

 Score =  178 bits (451), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 173/315 (54%), Gaps = 43/315 (13%)

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIA 774
            H +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E + 
Sbjct: 1    HMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRK--NHTEIVE 58

Query: 775  KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIER 834
             FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ R
Sbjct: 59   SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGR 118

Query: 835  GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVES 887
            G++   T      N+E+ L    I R      +++ RL S+   P        T Y+VES
Sbjct: 119  GDVEAQT------NAEKFLASGQIMR------EESLRLGSISCQPLENTLCEDTYYRVES 166

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            T A+V+LNS+V LIHF+CS+LPSD Y    P F +   +K  G    +C L LP ++P +
Sbjct: 167  TRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDI---DKASG----TCTLHLPKSSPVQ 219

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLP 1005
             +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P  
Sbjct: 220  TVN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP-- 275

Query: 1006 GTARHREFYPEGVAD 1020
                   ++PE   D
Sbjct: 276  ------SYFPEEFVD 284


>gi|395330621|gb|EJF63004.1| hypothetical protein DICSQDRAFT_83832 [Dichomitus squalens LYAD-421
            SS1]
          Length = 1330

 Score =  178 bits (451), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 179/619 (28%), Positives = 277/619 (44%), Gaps = 66/619 (10%)

Query: 1248 RFYVESIRYEMT----AESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRG 1303
            R +V  +R+++T    A+ S PR+ GY   LEY       K   G+E   + QPLI    
Sbjct: 681  RHFVIKVRHDLTPLCKADDS-PREAGYQNFLEYCK--ARCKDFQGLE--DENQPLIEVSA 735

Query: 1304 VSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMR 1363
            V    N L     H               Y +   PE+C+   +P S  R    +PSIM 
Sbjct: 736  VPGVINNL-----HPTSAPPTPPAKAPLKYLI---PEMCYKFTIPASTFRTLWLMPSIMN 787

Query: 1364 RVESMLLAIQLKDKINY-PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF 1422
            ++ES LL  +L  ++ +  V   ++L AL+  +    F YER E LGD++LK V S F +
Sbjct: 788  KIESYLLVKELNARLFHNAVIEQQLLIALSTPAAWTEFNYERLEFLGDSFLKVVASNFCY 847

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-GVLPVFDED 1481
               P  H G L + RQ ++SN VL + A   G+ SY+Q  RF    W  P     V +E 
Sbjct: 848  ATMPSVHVGDLHQARQSIISNKVLQEGATRVGVPSYVQHKRFVAKLWQPPLSTANVAEEL 907

Query: 1482 TKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEA 1541
              +G +   +      E K    ++  + + D+ ++    GD         K +ADVVEA
Sbjct: 908  KTEGGNGDVEMTGEAPEKKDKGKRSKKQRQLDE-QNTLWMGD---------KIIADVVEA 957

Query: 1542 LIGVYYVEGGKDAANHLMKWIGIQVESDPE--------EVGCPSRPACVPESVLRSVDFH 1593
            ++   ++ GG + A    + + + + +  +                  V  S    +   
Sbjct: 958  ILAASFLSGGHEVALEAARRLQVPIPNVAQWSDYARLAAHHAAREQTVVMASAPSRMTIS 1017

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
             LE     KF    LL +A+TH S  S    + Y RLEF+GDA+LD L++++++  +  L
Sbjct: 1018 VLEKLFNSKFNRLDLLGQALTHTSAFSGAEGTSYDRLEFIGDAILDFLVSRYIWERHPYL 1077

Query: 1653 PPGRLTDLRA--AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK--- 1707
             PG LT L+A  A V+N+  A   V   L  +LR  S  L   I+ ++ + LEEL K   
Sbjct: 1078 SPGGLTMLKANGAMVSNQTLAAFCVHVGLQQYLRMESKDLSTAIQKYI-DFLEELRKKEY 1136

Query: 1708 ---------PGFNSFGLGDCKAPKVLGDIVESIAGAIFL-DSGRDTSV---VWQVFQPLL 1754
                     PG     +   + PK L D+VES+ GA+++ D+  +  V      VF+P L
Sbjct: 1137 DFASREQRLPGQYWLDM-PMEPPKCLSDVVESLIGALYVSDNFFEVGVGRFFETVFKPFL 1195

Query: 1755 DPMVTPETLPMHPVRELQERCQQQAEGLEYKA------SRSGNLATVEVYIDGVQVGVAQ 1808
            +  V  +TL  +P   L E    QAEG +  A      SR      ++V I G  +  A 
Sbjct: 1196 EAHVRLQTLSTNPKITLLELL--QAEGCQNNAVVKQQQSRQNMPVQMDVVIHGKVIASAT 1253

Query: 1809 NPQKKMAQKLAARNALAVL 1827
            +    +A +  +  AL  L
Sbjct: 1254 DSSAVIATRKVSLTALDTL 1272



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/370 (21%), Positives = 153/370 (41%), Gaps = 38/370 (10%)

Query: 676  ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ-HTEDFRAIIFVERVVAA 734
            EL+ SH ++  + + V  G++  +  VT KV  L+++L  Y  + + FR I+FV   V A
Sbjct: 160  ELIKSHGMA--DRLQVAPGSS--NPNVTFKVSKLLQVLQPYAAYGDQFRGIVFVRDKVVA 215

Query: 735  LVLPKVF-AELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEG 793
             VLP +  A    + F+++   I  +  +      +   ++ F   +  L+V T   E+ 
Sbjct: 216  SVLPGLLNAAETQVPFIRA---IAPSRKERSGKNSLHAALSAFSSSKYNLIVLTKSMED- 271

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            +++   ++++ FD+    L+Y  S    R   S  + ++E+GN      L   ++ +  +
Sbjct: 272  VELPPASIIVNFDVFDDQLSYAYSHLHTRGRHSHLVYLVEKGNNEQRRILTRVQSVDNEM 331

Query: 854  RKEA--IERTDLSHLKDTSRLISVDAV------PGTVYQVES-TGAVVSLNSAVGLIHFY 904
            ++      R D  +    S  + +D         G  Y V++ T A +  + A+   + +
Sbjct: 332  KEWVGDFVRGD-CNAPPKSMHVGLDPYQSDSDNEGEDYIVDAVTSARIDKSQAIPTFYRF 390

Query: 905  CSQLPSDRYSILRPE-----FIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRL 959
              Q+    +++   E     F ME  E+          +  P +     + GP CS+   
Sbjct: 391  AIQM----HAVSGAEDEKVAFNMETGERGDDAAVLRYIISFPKSTALAAISGPYCSTKWE 446

Query: 960  AQQAVCLAACKKLHEMGAFTDMLLPD--KGSGEQQEKVDQNDEGEPLP------GTARHR 1011
            A++  C  ACK+L  +G       P   +    Q    D N E  P P       T+   
Sbjct: 447  AKREACHQACKELVRVGIMDHRHFPQSRRVPAGQSGSTDTNGE-TPAPRDVKTANTSAKT 505

Query: 1012 EFYPEGVADI 1021
              YP  + D 
Sbjct: 506  HGYPRKIPDF 515


>gi|336260369|ref|XP_003344980.1| hypothetical protein SMAC_06757 [Sordaria macrospora k-hell]
 gi|380095053|emb|CCC07555.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1365

 Score =  177 bits (450), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 171/601 (28%), Positives = 281/601 (46%), Gaps = 126/601 (20%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL++ E + ++N I  ++TG+GKT +AVL    I  +L++ +K++   FLVP V L
Sbjct: 66  ARAYQLEMFEASLRQNIIVAMDTGSGKTQVAVL---RIARELEQSDKRIW--FLVPTVAL 120

Query: 364 VYQQAEVIREQTGYV-VGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            +QQ +V++ Q   V     CG  G D W D   W       +++V T QIL +   H  
Sbjct: 121 AHQQHQVLQSQIPSVKTLLICGHDGVDSWSDQAVWDAILLNVRIVVSTYQILSDANAHGF 180

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQ 479
           +++++++L+++DE H+  K HP S +M+E Y    +     PS+ G+TASP+    +S+ 
Sbjct: 181 VRLDSLSLIVIDEAHNCSKSHPISRMMTEAYLPAKRAGLPVPSILGLTASPL----MSNN 236

Query: 480 VDCAIKICNLESKLDSVVCT-IKDRKELEKHV-------------------PMPSEVVVE 519
           +D    I  LE  LD+V  T  K R+EL +HV                   P P+++++ 
Sbjct: 237 LD---DIEKLEQVLDAVCRTPTKHREELLEHVNRPEMLVFPYGDSGGPVTEPAPTDLMIR 293

Query: 520 YDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQF-MGARDAGAKEELRQVYGVSERTE 578
           + +A     +    K  EV + +A ++   R K +  +  +D  A++E++ VY  S    
Sbjct: 294 FREAYHGLDIR---KDPEVLLLKAQRTERARQKLRHAVTKKDTTAQKEMKGVYNRS---- 346

Query: 579 SDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVV 638
                 L+ K         E+G W A                          + YL++ +
Sbjct: 347 -----ILVHK---------EVGPWAA--------------------------DYYLTRAI 366

Query: 639 SLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVA 698
           S +  EL                            E E  D H    GE +  I    V+
Sbjct: 367 SQMLAEL----------------------------EHEHSD-HFRYIGEALRSIPIPTVS 397

Query: 699 DGKV--TPKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASL 755
              +  + KVQ+L++IL    H ED   I+FV ERV+ ++V   +     +    ++A++
Sbjct: 398 KEPIQLSSKVQTLLRIL--SSHQEDPVGIVFVQERVMVSIVTHIISTHPLTKDRYRTAAM 455

Query: 756 IGHNNS-------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           IG  N        ++M      +++  FR+GR  LLVAT+V EEG+D+  CN+VI FD  
Sbjct: 456 IGTANVPGRKQHFKDMTNAGDNKSLEGFREGRFNLLVATNVLEEGIDVPICNLVICFDKP 515

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNA-RNSEETLRKEAIERTDLSHLK 867
             + ++IQ RGRARK  S   LM++  +   AT  R+  R  +E    E  E  +L  ++
Sbjct: 516 SNIKSFIQRRGRARKGSSTLYLMVQDASGESATGWRDLERLMKEKYEDEMRETAELELVE 575

Query: 868 D 868
           D
Sbjct: 576 D 576



 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 135/333 (40%), Gaps = 63/333 (18%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-- 1388
            K Y   LP     +   P +  +    +P+  R VE  L+A  L       +    +L  
Sbjct: 768  KLYQKVLPSTSIRMDDFPAAFAQVGAVMPAFTRAVEMSLVAADLMYNRLGCLELDNLLLV 827

Query: 1389 -EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
              ALT+   +    YER E LGD  LK+         +P  HE  L++ +  +V+N+ L 
Sbjct: 828  TTALTSIGSRAPTNYERLEFLGDTILKFCACLTASALFPNHHERLLSQWKDSLVNNVRLC 887

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + ++  GL  YI     A  +W      P F E+  D   S                   
Sbjct: 888  RASIDFGLDEYI-IHSMASKKWR-----PKFVENYLDDSKS------------------- 922

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA------------ 1555
                            S+  R +SSK +ADV+E+LIG  Y+ G    A            
Sbjct: 923  --------------PKSAETREMSSKMVADVIESLIGATYMCGDMSKALECIALLLPTSK 968

Query: 1556 NHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITH 1615
            +   KW  I +  D      P+      ++VL       LE A+   F  + LL+EA+TH
Sbjct: 969  SSKFKWQDIGLSRDKLFELAPN------DAVLHK-QLEPLEKAMGYAFTKKSLLIEAMTH 1021

Query: 1616 ASRPSSGV--SCYQRLEFVGDAVLDHLITKHLF 1646
             S P  G   SCY+RLEF+GDA+LD ++ K L 
Sbjct: 1022 PSCPGLGDNDSCYERLEFLGDAILDVIVVKRLM 1054


>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
 gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
          Length = 1677

 Score =  177 bits (450), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 214/428 (50%), Gaps = 42/428 (9%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L ALT  +  +TF  ER E LGD++LK+  S +L  K+P  +EGQLT ++ +++SN  L
Sbjct: 1191 VLAALTTINSNDTFDLERPETLGDSFLKFAASLYLHHKFPNMNEGQLTNIKGKLISNRNL 1250

Query: 1447 YQYALSKGLQSYIQADRFAPSR------WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            Y       L   ++ ++F+P        + AP  L  F E  +   + L   + +  E  
Sbjct: 1251 YYAGAKFNLGGRMKVEQFSPRSDFLVPGFFAPPKLEEFIEQRQIRPTFLIGIQFTEEEVM 1310

Query: 1501 LGT------DKNYNEYEDDDME---DGELEGDSSSY---RVLSSKTLADVVEALIGVYYV 1548
             G       +   N +++   E   +G  +     Y   + ++ K++AD VEALIG Y +
Sbjct: 1311 TGELSEESWESVMNNFQNGIAEAEPEGCAQNSMQCYVHSQAVADKSIADSVEALIGTYLL 1370

Query: 1549 EGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPES----VLRSVDFHA------LEDA 1598
             GG  AA  L++W+ +    D        +P   P S        +DF        +E  
Sbjct: 1371 SGGILAAVKLLEWMEVFPPQD-NFADMLHKPVQTPLSKNLATEADIDFLLNNSRTDVEKI 1429

Query: 1599 LKIKFKDRGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            L   FKD   L+ A++H+S   + + S Y+RLEF+GDA++D L+T H+F +   L PG +
Sbjct: 1430 LNYTFKDSTFLLNALSHSSYIRNRLTSSYERLEFLGDAIIDFLVTSHIFENCRELKPGEM 1489

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHL-RHGSSALDRQIRDFVKEVLEELLKPGFNSFGL- 1715
            TDLR+A VNN  FA   VK  LH +L    + +L++ I  FV+  +E   +  F+   L 
Sbjct: 1490 TDLRSALVNNVTFAAYTVKLGLHKYLCSELNPSLEKAIMKFVEHQIERNHEIEFDVLLLI 1549

Query: 1716 --GDCK------APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               DC+       PKVL DI E++ GA++LDSG +   VW V   ++   +    + +P 
Sbjct: 1550 SEVDCQVAEYVDVPKVLSDIFEALVGAVYLDSGGNLETVWSVLYKIMHVEIDSFSKRIPK 1609

Query: 1766 HPVRELQE 1773
             PV+ L E
Sbjct: 1610 QPVKILYE 1617



 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 130/228 (57%), Gaps = 12/228 (5%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ----NKKMLAVF 356
           E++ARPYQ  + E A  KNTI  L TG+GKT IA  LI+   N L++      K+  + F
Sbjct: 11  EQKARPYQAILEEIASSKNTIIHLPTGSGKTFIAQRLIKKFRNQLKKPWGEGGKR--SFF 68

Query: 357 LVPKVPLVYQQAEVIREQTGYV--VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           LV  VPLV QQ  VI E    V  VG Y  E G D+W    W  E    QV+VMT+QIL 
Sbjct: 69  LVNTVPLVNQQKNVI-EMMCPVDGVGAYSSEDGVDYWKKADWDSELARNQVIVMTSQILS 127

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           ++L H+ I++E INL+I DECHHAV+ HP  ++M  F +  + E +P V G+TA+ +N  
Sbjct: 128 DMLTHAYIRIEDINLIIFDECHHAVEDHPMRVIMKHFLNCKAHE-QPRVLGLTATLLNGN 186

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
              S+++  +K   LE+   + + T+ D  E+  +   P E +  + K
Sbjct: 187 VSISKIEETLK--QLENTFHATIATVDDLGEVMTYSTNPQEFIQYFRK 232



 Score =  101 bits (251), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 156/305 (51%), Gaps = 29/305 (9%)

Query: 713 LLKYQHT-EDFRAIIFVERVVAALVLPKVFAELPS-----LSFVKSASLIGHN-----NS 761
           LLK  H+ +    IIF ++   + +L  +  +L         F+K   ++G +     ++
Sbjct: 389 LLKVNHSRKPLCGIIFTKQRFTSKILYNILMDLKKARPDEFEFLKHDFVVGFSINPFKST 448

Query: 762 QEMRTFQM--QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
           +E    +   Q+ I  F +G +  L++TSV EEGLDI QC +V+R+D      +YIQS+G
Sbjct: 449 REEHYLKKSSQKAILGFNNGDLNCLISTSVIEEGLDIPQCALVVRYDAPTEYRSYIQSKG 508

Query: 820 RARKPGSDYILMIERGNLSHATFLRNA-RNSEETLRKEAIERTDLSHLKDTSR-----LI 873
           RAR   + ++++++  +        +A + +EE +R   +   D S    T++     L 
Sbjct: 509 RARSSEASFVILVDIEDKQSFLIKYDAFQKTEERIRNLIV--GDDSRAAPTTQDIHENLY 566

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
             D VP   Y+  S G ++   SA+ L+  YCS LP D+++ + P ++ E  E  G   +
Sbjct: 567 DDDEVPP--YET-SNGNILYSVSAISLLSRYCSILPHDQFTTITPVWLQEVVEN-GAKKQ 622

Query: 934 YSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM-LLPDKGSGEQ 991
            +  + LP  +P  E+++G   S+ + A+++  L AC KLHE+G    + LLP K +   
Sbjct: 623 VT--VILPIGSPVKEEIKGDPYSNTKTAKRSAALKACIKLHELGELHPLTLLPYKYAEVD 680

Query: 992 QEKVD 996
            E+ D
Sbjct: 681 YERDD 685


>gi|378734261|gb|EHY60720.1| hypothetical protein HMPREF1120_08668 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 1469

 Score =  177 bits (449), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 160/622 (25%), Positives = 277/622 (44%), Gaps = 73/622 (11%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           ++R YQ+++ E + K N IA + TG GKT +A L I +   + +R   K +  F  P V 
Sbjct: 25  RSRAYQIEMFEHSMKGNVIAVMGTGTGKTQVAKLRIEA---EFERSPIKRIW-FTAPSVV 80

Query: 363 LVYQQAEVIREQ-TGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
           L YQQ   +  Q   +      G    +FWD Q  W +       +V T  ILL  L   
Sbjct: 81  LAYQQYCFLSWQLPAFQFRLITGMDNAEFWDTQEVWDKALHNINGVVSTPAILLQALDGG 140

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE----KRPSVFGMTASPVNLKGV 476
            + M+ I+LL++DE HH V K   + +M   YH   K     + P + G++ASP+  K  
Sbjct: 141 FVSMKTISLLVVDEAHHCVAKSLVNTIMKVHYHPVKKANCPYELPHILGLSASPITKKSP 200

Query: 477 SSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQ 535
           +       +I  LE+ LD+   T ++  +E    V MP  V++ +D+  +  +    L Q
Sbjct: 201 A-------EITELEANLDAQCKTPLQQLEEYTAFVNMPEIVILTFDEEMTPDA--RLLTQ 251

Query: 536 MEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
           +   V +   +     K +     D  A E+LR++     +  +     L   LR+    
Sbjct: 252 LSSLVSDLRFTDDPIMK-KLQEKDDQKAAEKLRKII---HKGATPAMTELNTLLRSATTI 307

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
             +LG+W                            E+Y++  V  L C +   A  +   
Sbjct: 308 QQDLGRWAC--------------------------ETYITACVRKLHCAVRNAAGLEIHP 341

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            +      F+E     +       S    GG       G+  +   ++ KV  L+  L K
Sbjct: 342 GLTHDNRPFMESTLRPLHA-----SLGAPGG-------GSLSSPEDLSAKVAILLNFLRK 389

Query: 716 YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQ----- 770
            ++  D R +IFV     A  L +V    P++S  ++ S +G +N      F        
Sbjct: 390 -EYRSDVRGLIFVHARHTAWALTEVINSHPAMSNYRAFSFVGVSNPAYQGAFDFAQLHIQ 448

Query: 771 -ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
            E + +FR G++ L +ATSV EEG+D+   N+VI FD    + +++QSRGRAR+  S Y+
Sbjct: 449 FENLERFRRGQLNLCIATSVLEEGIDVPSMNLVISFDARPNLRSFVQSRGRARQRNSKYV 508

Query: 830 LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
            +  R +L   + +++    E  ++++    + L  L+    + S+    G++++V STG
Sbjct: 509 EL--RSSLEPYSKIKSFEAWEADMKRKC--ESSLRDLEARKVVESLKEEGGSIFRVPSTG 564

Query: 890 AVVSLNSAVGLIHFYCSQLPSD 911
           A ++ ++A   +  +CS+LP +
Sbjct: 565 ATLTFDNARQSLQRFCSKLPRN 586



 Score = 87.8 bits (216), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 144/346 (41%), Gaps = 80/346 (23%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL------EA 1390
            LP + C +  +P    R    +PSI   +E   + ++       P+    ++      EA
Sbjct: 889  LPVDQCVLLGVPVDYARLMLLVPSITHMLE---VCLRTAAACQGPLAGLPLVDMDLVSEA 945

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            LT         YER E LGD  LK+  S   F+  P   E  LT  R ++V+N  L +  
Sbjct: 946  LTLPRVGPR-NYERLEFLGDDLLKFYTSIQGFVDNPTYPESGLTIARNRIVNNARLQRAT 1004

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             +  L+ ++   RF+ + W A GV                       ED+ G        
Sbjct: 1005 RTLALEQFLTQHRFSGAEWTA-GV---------------------SKEDREG-------- 1034

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
               D  D    G+ +    LSSKTLADV+EALIG   + G     N      G  +ES  
Sbjct: 1035 -HGDSTDTVAHGEKTH---LSSKTLADVIEALIGAASLNGSTTTTN------GDNIESRS 1084

Query: 1571 EE----------VGCPSRPACVPESVLRSVDFHALEDA--------------LKIKFKDR 1606
            +E             P RP  V E+++R    H ++D+              +  +F   
Sbjct: 1085 QEGVIAALRLFLEEVPWRP--VSENLVR---IHVMDDSEITGYQLYAPVESLIGYRFTRH 1139

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
             LL EA+T  S     VS Y RLEF+GDAVLDH++ + LF S T++
Sbjct: 1140 ALLAEALTQ-SWLGGQVSSYDRLEFLGDAVLDHIVKQALFHSSTDV 1184


>gi|258567596|ref|XP_002584542.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237905988|gb|EEP80389.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1055

 Score =  177 bits (449), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 220/488 (45%), Gaps = 78/488 (15%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+IR   +   +NLL  R E  ++ EGE           F+  E   +  +P S+   A
Sbjct: 590  QPVIRAELIQLRRNLLDKRTEKEKQNEGE----------CFICLEALTVSAIPASVAALA 639

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------C 1401
               P+I+ R+ES L+A++   K++  +PA   LEALT  S         Q  F       
Sbjct: 640  FAFPAIISRLESYLIALEACQKLDLSIPAELALEALTKDSDNTEEHRAMQVHFQRGMGKN 699

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  +V N  L++ AL+  L  +I++
Sbjct: 700  YERLEFLGDCFLKMATSISLFTMNPDNDEYDFHVKRMCLVCNQNLFKAALNLKLYEFIRS 759

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +       G      Q K+  E+K                     
Sbjct: 760  QSFSRRGWYPEGLTLL------QGKG----QSKTAPENK--------------------- 788

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV------- 1573
                    L+ KT+ADV EALIG  Y+ GGK     + ++ + + V S    V       
Sbjct: 789  ------HALADKTIADVCEALIGASYLSGGKSHRFDMAVRAVTVFVNSSDHNVSDWQDYS 842

Query: 1574 ---GCPSRPACVPESVLRSVDFHA-LEDALKIKFKDRGLLVEAITHASRPSS--GVSCYQ 1627
                 P     V +     +D  A +++ L  +FK   LL  A TH+S PS+   V CYQ
Sbjct: 843  KLYALPRYQTAVSDPA--EIDLVAQIKEKLGYQFKYPKLLRSAFTHSSYPSAWAAVPCYQ 900

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD++LD    +HL+  Y +  P  LT+ + A V+N+    VAVK  LH HLRH S
Sbjct: 901  RLEFLGDSLLDMACVEHLYHRYPDKDPQWLTEHKMAMVSNKFLGCVAVKLGLHPHLRHFS 960

Query: 1688 SALDRQIRDFVKEVLEELLKPGFNSFGLGDCK-APKVLGDIVESIAGAIFLDSGRDTSVV 1746
            + +  QI  +V+E+    L+ G +          PK L D+VE+  GAIF+DS     VV
Sbjct: 961  APIQSQIATYVEEIEAAELESGDSPDAWTSTSDPPKCLPDMVEAYIGAIFIDSDFRYEVV 1020

Query: 1747 WQVFQPLL 1754
               F+  L
Sbjct: 1021 EDFFERFL 1028



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 96/340 (28%)

Query: 702 VTPKVQSLIKILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
           ++PKV+ L + L KY  +HT D + I+F E+   A +L  +FA++ +  +++   LIG  
Sbjct: 41  LSPKVRRLHQELSKYFERHT-DTKCIVFTEKRHTARILSDLFAKIGT-EYLRPGLLIGVR 98

Query: 760 NSQEMRT---FQMQET-IAKFRDGRVTLLV---------------------ATSVAEEGL 794
           +     T   F+ Q   + KFR+G V  LV                     ATSVAEEGL
Sbjct: 99  SDPSGATNVSFRQQILEVVKFRNGEVNCLVIYLDMLPVGLLMSTRLIVVKFATSVAEEGL 158

Query: 795 DIRQCNVVIR----------------FDLAKTVLAYIQSRGRARKPGSDYILMIERGNLS 838
           DI  CN+V+R                FDLA T+  YIQSRGRAR   S +  M+E+ N+ 
Sbjct: 159 DIPDCNLVVRYANHLRMKMLYTEVDRFDLACTLTQYIQSRGRARHVNSTFAHMVEQDNVV 218

Query: 839 HATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAV 898
           H               KE+++    S + + SR                    V++ + V
Sbjct: 219 H---------------KESVKYLQSSEVSERSR--------------------VNIYTHV 243

Query: 899 GLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE---------------YSCKLQLPCN 943
            L+  Y   +         PEF ++R+ +P    E               + C++ LP  
Sbjct: 244 NLVLGYYEPILHLFTKGSHPEF-LQRYRRPQYEKETSANVNYYHSFSQNAFHCEVVLPEK 302

Query: 944 APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
           +P   L G   S   +A+Q+     C  L + G   D  +
Sbjct: 303 SPVRGLTGKPASKKLVAKQSAAFETCLLLRKHGLLDDHFV 342


>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
          Length = 1482

 Score =  177 bits (449), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 188/746 (25%), Positives = 326/746 (43%), Gaps = 105/746 (14%)

Query: 270 DHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAG 329
           + +R+ +E++ I  +   K G         P  + R YQL++LE + ++N I  ++TG+G
Sbjct: 13  ERHRSLEESDNILADSELKNGMLENGCRSPPVFKPRAYQLEMLEASLRENIIIAMDTGSG 72

Query: 330 KTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQ-TGYVVGHYCGEMGQ 388
           KT +A+L IR   ++L+      L  FL P V L  QQ + I +Q + Y      G    
Sbjct: 73  KTQVAILRIR---HELETCAAHKLVWFLAPTVALADQQHKSISQQLSAYQTRLLLGSDNV 129

Query: 389 DFWDAQR-WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLV 447
           ++W  +  W       +++V T Q+LL+ + H  + M  I LL+ DE HH  +    +++
Sbjct: 130 NYWSTKNIWDDILLNIRIVVSTPQVLLDAMTHGFMTMSRIALLVFDEAHHCAENEAPNIL 189

Query: 448 MSEFYH-----TTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK- 501
           M  FYH     T +    P + G+TASP+      ++VD    +  +E  L+S   T + 
Sbjct: 190 MQRFYHEQLQRTGTANDLPHILGLTASPI------TKVDPKY-LMKIEHNLNSRCETPRI 242

Query: 502 DRKELEKHVPMPSEVVVEYDKAAS-----LWSLHEQLKQMEVA----VEEAAQSSSRRSK 552
            R+EL ++V  P    V +    S     L SLH  ++ +++     ++   Q   RRS+
Sbjct: 243 HREELMRYVHRPELCTVNFQVDVSVGSDILQSLHRIVETVDIEQDPWIKRLKQQKDRRSQ 302

Query: 553 WQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFL 612
              + A         R+ + +S+ T+    A  I +          LG W A        
Sbjct: 303 NTLLNAMVK------RKTFAISQMTKLRRQATNIHE---------NLGAWAA-------- 339

Query: 613 TALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEI 672
                             ++++S+V+  L      GA  K+  +  D        GT E 
Sbjct: 340 ------------------DAFISEVLKRL------GA--KRAKQSAD------HLGTLER 367

Query: 673 EEGELLDSHVVSGGEHVDVIIGAAVADGK---VTPKVQSLIKILLKYQHTEDFRAIIFVE 729
           E+    ++ V      + +       D +   V+ K   LI +L K +HT DF  IIF +
Sbjct: 368 EQ----ENFVFETLSQLPIYPSKQYWDSEPDLVSSKANLLIDLLEK-EHTSDFTGIIFAQ 422

Query: 730 RVVAALVLPKVFAELPSL-------SFVKSASLIGHNNS-QEMRTFQMQE-TIAKFRDGR 780
           +     +L  + ++ P L       +F+  A      ++  E+   + Q  +I   R G+
Sbjct: 423 QRSTVTMLAHLISKHPRLKDLIVPGAFLGDAGYADRTSTITELHNTKTQRGSIDDLRSGK 482

Query: 781 VTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHA 840
             LLVATSV EEG+D+  C++V+ FD    + ++IQ RGRARK  S +++ +   + S  
Sbjct: 483 KNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQRRGRARKERSKFVIFLNGDDKSQE 542

Query: 841 TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY-QVESTGAVVSLNSAVG 899
                  +  +++ +E + R  L ++     +          Y ++E TGA+++  +A  
Sbjct: 543 KKWNKMEDVMKSMYEEDMRR--LENIWAIENIEEEADEKENEYLRIEPTGALLTFENARP 600

Query: 900 LIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP-VCSSMR 958
            +  +C+ L  D ++  RP F+    E PGG       L    +  F  + G       R
Sbjct: 601 HLEHFCATLQCD-FTDTRPVFLYSESE-PGGMVTGKVILPNVLDPKFRVIRGSKWWRRER 658

Query: 959 LAQQAVCLAACKKLHEMGAFTDMLLP 984
           +AQ+     A  KL+  G   D LLP
Sbjct: 659 MAQRDAAFQAYVKLYREGLVNDNLLP 684



 Score =  157 bits (396), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 192/444 (43%), Gaps = 84/444 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSIM +VE  L+A QL   I  PV     S ++ A++A+
Sbjct: 932  PARDCSIDKLPLEFSLFALLTPSIMHKVEIYLIAEQLNKTILKPVAFTDLSLVVTAISAS 991

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  +  L       HEG L+R +  +VSN  L   A+  G
Sbjct: 992  VAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETG 1051

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W                                     YN+   + 
Sbjct: 1052 LDKFILVDVFTGAKWRP----------------------------------RYNKVHLES 1077

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
             E G         R +++KTLADVVEAL+G   +EGG+      ++    ++   P +  
Sbjct: 1078 EEQG------IPQREMTTKTLADVVEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDR 1131

Query: 1575 CPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +    VPE+   +R+  F  +E  L   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1132 INALYNSVPEAYENIRTSWFQEIESLLGYSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFV 1191

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF S  NLP   +  +R A  N +  A + +                 
Sbjct: 1192 GDAILDHIIVHHLFNSSRNLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKK 1251

Query: 1676 ---------KHKLHVHLRHGSS-----------ALDRQIRDFVKEVLEELLKPGFNSFGL 1715
                     K  L  ++RHG+S              ++++  + E LE+     +    L
Sbjct: 1252 NTVTSLTTRKVFLWQYMRHGTSWELAAAQQQTADQYQKLQADISEALEK--SNTYPWTLL 1309

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDS 1739
               +A K   D++ES+ GAIF+DS
Sbjct: 1310 SRLRAQKFFSDLIESVLGAIFIDS 1333


>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  177 bits (449), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 190/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCPSRPACVPESVL---------RSVDFH-----------------ALEDALKIKFKDR 1606
               P      PE+V+         RS   H                   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNPENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557



 Score = 47.4 bits (111), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRS-VDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
            ++++ D  E+  P+    +  ++L +   F    D +        ++++A+T  S  + G
Sbjct: 1623 LKLQYDRMEIQPPTSTKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALT-MSNANDG 1681

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            ++  +RLE +GD+ L + IT +L+ +Y N+  G+L+ LR+  V N N  R+  + +L
Sbjct: 1682 IN-LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRL 1737


>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1725

 Score =  177 bits (449), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/312 (37%), Positives = 172/312 (55%), Gaps = 24/312 (7%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FV 750
           +I   V     +PKV+ LI IL  + +T +F+ I+FVE+   A  L K+   +P LS  +
Sbjct: 348 VIPTTVHLKWCSPKVRELIDILFAH-YTSNFQGIVFVEQRHVAACLSKILPRVPQLSHLI 406

Query: 751 KSASLIGH--NNSQEMRTFQM-----QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVI 803
           K+  LIGH   N  +M+T  M     Q+ +  FR+ ++ LL+ATSVAEEGLD   C++VI
Sbjct: 407 KTGQLIGHGTTNLAKMQTKGMALRTQQDIVKLFRERKINLLIATSVAEEGLDFPACDLVI 466

Query: 804 RFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER--T 861
           RFD  + ++ Y+QSRGRAR   S +I+M++ G+ +H +  +N   SE  LR     R   
Sbjct: 467 RFDPLQHMVGYLQSRGRARHRSSKFIIMVQEGHENHLSRYKNFSESEPHLRLVYQTRGDR 526

Query: 862 DLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFI 921
           D     +  R    D      Y V STGAV++ NSAVGL++  CS +P D+Y+   P  +
Sbjct: 527 DDIDEDEEERDDPADLAERERYVVLSTGAVLTYNSAVGLLNHLCSLIPHDKYT---PTHL 583

Query: 922 MERHEKPGGPTEYSCKLQLPCNAPFEKLE----GPVCSSMRLAQQAVCLAACKKLHEMGA 977
                 P    +++  LQLP + P    +    GP   S + A++AV   A K+LHE+G 
Sbjct: 584 ------PRYTGDFTSTLQLPSSLPLTPADLSFMGPEKRSKKEAKRAVAFLAVKRLHELGV 637

Query: 978 FTDMLLPDKGSG 989
           F D LLP + SG
Sbjct: 638 FDDYLLPAQSSG 649



 Score =  160 bits (404), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 127/218 (58%), Gaps = 11/218 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I+ LLI+ I        K  + VFLVPKV LV
Sbjct: 15  RRYQEEIFARAQRSNVIAALDTGSGKTYISTLLIKWISTKDAGLGK--IIVFLVPKVALV 72

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ + I +QT   V  YCG    D  D   W+ E +   V VMTAQI LN+L HS+  +
Sbjct: 73  DQQGDFIAKQTPLRVRKYCGATAIDLADRTTWKAELEGADVFVMTAQIFLNLLTHSLWSL 132

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDCA 483
           + ++L++ DECHH  K H Y+ +M E++  +S ++RP +FGMTASP+ N K      D  
Sbjct: 133 DRVSLMVFDECHHTRKNHAYNGIMREYFQGSS-DRRPKIFGMTASPIWNPK------DAV 185

Query: 484 IKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEY 520
             +  LE  LD+ V  ++    EL  H P P E++ +Y
Sbjct: 186 ESLATLERNLDAKVIAVRQHVDELMDHSPRPQELLHQY 223



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 229/520 (44%), Gaps = 54/520 (10%)

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-V 1382
            EGE+    +  +  P  +C        +      LP +  R+  +  A   + ++  P +
Sbjct: 887  EGEQPATASEILMYPLSMCRRAEFSEGVRDAFHVLPELCHRITDVYRAHAARVELGLPPI 946

Query: 1383 PASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
                +++ALT  S    F  +R E LGD+ LK      LF ++P +HEGQL  +R+  VS
Sbjct: 947  LDDLLIQALTIPSANAGFNNQRLETLGDSVLKLTTVVHLFNRFPFRHEGQLDTLRRNSVS 1006

Query: 1443 NLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            N  L   A   GL+ Y+  +  +   W                                 
Sbjct: 1007 NRTLLARAKEVGLEEYLSCESQSMRVW--------------------------------- 1033

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
                Y    +DD     +E    ++RV   ++L D +EA +G  +  GG   A      +
Sbjct: 1034 ---RYTLAAEDD-PSWSVEPRRRAHRVFPRRSLQDCMEATLGAAFTTGGMGMALRAGTAL 1089

Query: 1563 GIQVESD-PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
            G+ +    P ++       C+P+S + ++ F  L+++L  +F+   LL+EA+TH S  S 
Sbjct: 1090 GLSLGGPLPWDI---RYGGCIPKSPVSAL-FTLLQESLGYRFRSGRLLLEAMTHPSFNSF 1145

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH-KLH 1680
              S YQRLEF+GDAV+D  + ++L+  +     G+L+  R+ AV   + A VAVK   LH
Sbjct: 1146 ETSSYQRLEFLGDAVVDLAVMRYLYNKFPQATSGQLSWARSRAVCAPSLASVAVKRLGLH 1205

Query: 1681 VHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L   +  L   I ++V  +LEEL               PK + D++ES+ GA+ +DS 
Sbjct: 1206 KLLLVNNVELSIAINNYVP-ILEELSNEELIHNAWKQ-DPPKAISDVMESVLGAVLVDSD 1263

Query: 1741 RDTSVVWQVFQPLLDPM--VTPETLPMHPVREL-----QERCQQQAEGLEYKASRSGNLA 1793
             +  +   V + ++  +  V    LP  P+ EL     +  C + +    +  + +    
Sbjct: 1264 YNWEIACSVSEMVMGDLLVVLSPNLPRDPISELMIWVSRSGCSKASFKKSHSNAEAKKND 1323

Query: 1794 TVEVYI-DGVQVGVAQNPQKKMAQKLAARNALAVLKEKET 1832
            ++ V + D   VG    P   +A+ LA+  A ++L++ ++
Sbjct: 1324 SISVIVHDKTVVGPLFAPNLSLAKGLASERARSILEDPKS 1363


>gi|41469332|gb|AAS07188.1| putative ribonuclease III, 5'-partial (with alternative splicing)
            [Oryza sativa Japonica Group]
          Length = 416

 Score =  177 bits (448), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 173/315 (54%), Gaps = 43/315 (13%)

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---SQEMRTFQMQETIA 774
            H +D R I+FVERV+ ++VL  + + +  +S      + G      SQ  +     E + 
Sbjct: 1    HMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHT--EIVE 58

Query: 775  KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIER 834
             FR G+V +++AT + EEGLD+  CN+VIRFD + TV ++IQSRGRAR   SDY+L++ R
Sbjct: 59   SFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGR 118

Query: 835  GNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP-------GTVYQVES 887
            G++   T      N+E+ L    I R      +++ RL S+   P        T Y+VES
Sbjct: 119  GDVEAQT------NAEKFLASGQIMR------EESLRLGSISCQPLENTLCEDTYYRVES 166

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            T A+V+LNS+V LIHF+CS+LPSD Y    P F +   +K  G    +C L LP ++P +
Sbjct: 167  TRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDI---DKASG----TCTLHLPKSSPVQ 219

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP--DKGSGEQQEKVDQNDEGEPLP 1005
             +   V     + ++ VCL AC++LH +GA TD LLP  D    E+ + V +N   +P  
Sbjct: 220  TVN--VEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQP-- 275

Query: 1006 GTARHREFYPEGVAD 1020
                   ++PE   D
Sbjct: 276  ------SYFPEEFVD 284


>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
          Length = 1530

 Score =  176 bits (447), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 193/437 (44%), Gaps = 115/437 (26%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT     ++   ER ELLGD++LK V S +L+   P  HEG+L+  R + V+N+ L
Sbjct: 1107 ILQALTPRGANDSINLERLELLGDSFLKLVTSVYLYNLRPNSHEGKLSEARSRRVANINL 1166

Query: 1447 YQYALSKGLQSYIQADRFAPS--------RWAAPGVLPVFDEDTKDGDSSLFDQEKSVAE 1498
            +     KG+ S I +D F            W  PG                         
Sbjct: 1167 FVLGKKKGITSAILSDDFVSGIDSFKERLTWVPPG------------------------- 1201

Query: 1499 DKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL 1558
                    Y   E+             S++V + K++AD VEALIG + V GG +    L
Sbjct: 1202 --------YAALEE-------------SHKV-TDKSVADTVEALIGAHTVAGGLEGGITL 1239

Query: 1559 MKWIGIQVESDPEEVGCPSRPACVPESVLRS----------------------------- 1589
            MKW GI++      +  P   +    S+L +                             
Sbjct: 1240 MKWFGIKINDGSSTIAPPKSTSSNTRSLLLAESDSIFSSHFGSPPAPKLAFSDKAISTRN 1299

Query: 1590 ---VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHL 1645
                   +++  ++  FK+  LL+EA+TH+S   + ++ CYQRLEF+GDA+LD+L+T H+
Sbjct: 1300 RILPQVSSIQGKIEYSFKNELLLIEAMTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHI 1359

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            + S ++  PG +T+LR+A V N  FA++A+   LH  L HGS  L   ++ + + + +  
Sbjct: 1360 YQSDSSAEPGEITELRSALVCNSRFAKLAISLNLHKSLCHGSPNLFNDMKKYAQSLRQRE 1419

Query: 1706 LKPGFNSFGLGD---------------------------CKAPKVLGDIVESIAGAIFLD 1738
             +  F    + D                            + PK L D  E++AGA+F+D
Sbjct: 1420 KEDMFEEMSINDNDSAQAIVESIKDGDFDDDDDDDDDDDIEPPKSLSDCFEALAGAVFID 1479

Query: 1739 SGRDTSVVWQVFQPLLD 1755
            SG +   VW+ F P L+
Sbjct: 1480 SGMNLQTVWEAFSPFLE 1496



 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 36/319 (11%)

Query: 717  QHTEDFRAIIFVERVVAALVLPKVFAE----LPSLSFVKSASLIGHNNSQE--------- 763
            Q     R IIF ER   AL L K+  E     P L  V    ++GH+  Q          
Sbjct: 402  QAKRALRGIIFAERRHTALCLSKLIQEKKKTQPDLKHVSCDFVVGHSLGQSGNAMRKEAR 461

Query: 764  MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
            M++ + ++ + KFR G V LLVATSV EEG+D+ +CN+VIRFDL +   +Y+QS+GRAR 
Sbjct: 462  MKSSRQEQVLGKFRKGTVNLLVATSVIEEGVDVPRCNLVIRFDLPQNFRSYVQSKGRARD 521

Query: 824  PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
              S ++L++     +    +R     E  L +       L   ++  + ++ D +P   Y
Sbjct: 522  KPSKFVLLLSDMEKNKLGEIRCYHQLETELIELCQSDRALPSEEEIQKKMA-DIIPP--Y 578

Query: 884  QVEST-GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT---------- 932
                T GA VSL +++ L+H YC +LP D Y+ L P F +++  K GG T          
Sbjct: 579  MPNGTEGARVSLGNSLTLLHRYCGRLPQDEYTKLSPHFEVKKIPKAGGRTLSLSELSLEE 638

Query: 933  -------EYSCKLQLPCNAPFEK--LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
                    Y C L LP N P     ++ P   + + +Q+A  L A +KLH+M    D+  
Sbjct: 639  EDEDPNHNYICSLFLPINCPLRSDIIKSPPLGTKQQSQRAAALYAMEKLHKMDEVDDLFK 698

Query: 984  PDKGSGEQQEKVDQNDEGE 1002
                +    E V +  +GE
Sbjct: 699  AKASADSDDEDVKEEKKGE 717



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 134/261 (51%), Gaps = 19/261 (7%)

Query: 298 KMPEEQ-----ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---N 349
           KMP E+      RPYQ  ++E A K+NTI  L TGAGKT +AV+LIR + +  + Q   +
Sbjct: 8   KMPMEKKELRKGRPYQDKMVEYAIKENTIVSLGTGAGKTFVAVMLIREMAHFAEGQFTES 67

Query: 350 KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEM--GQDFWDAQRWQREFDTKQVLV 407
           +    +FL   VPLV QQAE IR+ T   V  + G+     D W  + W   F+   VLV
Sbjct: 68  EGQRIIFLAHTVPLVKQQAEYIRDNTSLKVFEFVGDPKGNIDSWPKETWYNHFNAANVLV 127

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
            +  I L++L    IK   + L++ DECHHA K  P+  +M +       E+RP + G++
Sbjct: 128 FSRTIFLDLLMKGFIKPRQLCLIVFDECHHATKNDPFVQIM-KVVKDAPPEERPRILGLS 186

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY----DKA 523
           AS +  K     +   +K  NLE+ L S   T  D +E+ K    P E +  Y    D+ 
Sbjct: 187 ASLLGQKVKPGDLKKGVK--NLEATLMSTARTAPDMEEVLKFATNPDEKIASYESALDEP 244

Query: 524 ASLWS--LHEQLKQMEVAVEE 542
           ASL    +H  L  ++  ++E
Sbjct: 245 ASLLKEIIHPPLVFLQTKIQE 265



 Score = 49.3 bits (116), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 14/113 (12%)

Query: 1271 LGPLEYSSYADY---YKQKYGVELIFKKQPLIRGRGV--SYCKNLLSPRFEHSEEQEGEG 1325
            L P  Y  +A++   +K KY  E+I K QP +  R V  S+ K L + R+  SE    + 
Sbjct: 936  LSPFNYPKFANFVEFFKSKYDYEIIDKDQPALICRRVNTSFLK-LFTSRYLMSEPAVKKT 994

Query: 1326 EEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
            +        + + PEL  + P+  S  R  + LP+++ RVES+L+A +L  +I
Sbjct: 995  D--------ITMFPELVHVFPVSVSFWRVLRCLPAMLWRVESLLIAHKLSTRI 1039


>gi|449493233|ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
          Length = 275

 Score =  176 bits (447), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 8/233 (3%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L  +F+D+ LL EA T AS      S ++RLE+VGD+VL+ LIT+  +FS  NL P
Sbjct: 37   IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSP 96

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT LRAA V+ E  ARVA+ H  H +LRH  + L ++I +F + + E  L        
Sbjct: 97   GSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN----- 151

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQER 1774
             G  KAPKVL DIVES  GA+F DS      VW++F+ L++P++T +T+  HP+ EL E 
Sbjct: 152  -GMIKAPKVLADIVESTIGAVFADSN-SIDTVWKIFKELMEPLITLKTMKKHPMTELTEM 209

Query: 1775 CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            CQ+++  LE++  R      +EV I+   VG     +K +AQ  AA+NAL  L
Sbjct: 210  CQKRSLKLEFR-DRWEETKEIEVLIEKQVVGKGSYRKKLIAQNRAAKNALENL 261



 Score = 46.2 bits (108), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 1378 INYPVPASKILE-ALTAASCQETFC--YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            +NY     ++LE A T AS     C  +ER E +GD+ L ++++R  +   P    G LT
Sbjct: 41   LNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT 100

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R+R   V    L + A++ G   Y++ ++
Sbjct: 101  RLRAANVDTEKLARVAITHGFHRYLRHNK 129


>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1439

 Score =  176 bits (445), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 193/727 (26%), Positives = 335/727 (46%), Gaps = 90/727 (12%)

Query: 303  QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAV-FLVPKV 361
            Q R YQ +++E++ K N I  ++TG+GKT IA+   R+     Q        V FL P V
Sbjct: 23   QLRAYQAEMVEESMKANIIVVMDTGSGKTHIAIERTRAELETCQPDKPTWKIVWFLAPTV 82

Query: 362  PLVYQQAEV-IREQTGYVVGH--YCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNIL 417
             L  QQ EV +    G+  GH   CG    +FW  QR W       +++V T Q+LL  L
Sbjct: 83   SLCEQQHEVFLSNLPGF--GHQILCGRDDIEFWTTQRHWDSILTNVRIVVSTHQVLLEAL 140

Query: 418  RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNLK 474
             H  +K+  + LLI DE HH    HP + +M+ FY     + R   P V G+TASPV +K
Sbjct: 141  THGFVKLTKLALLIFDEAHHCTLNHPANQLMTNFYMPQLHDNRNSLPKVLGLTASPV-MK 199

Query: 475  GVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
             V+++    +    +E  L +   T K  R EL ++V  P  V + Y  + +        
Sbjct: 200  AVATRQGLEL----IEQNLHATAKTPKLHRSELMRYVHQPELVQIAYPSSPA----GTHY 251

Query: 534  KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
             Q+ +A++EA ++ + +     +   D  +K      Y VS               R +N
Sbjct: 252  SQLLLALQEAYETYNLQRDPYVIALLDQHSKG-----YDVS---------------RQLN 291

Query: 594  YALGELGQWCAYKVAQSFLTALQNDERANY-QLDVKFQESYLSKVVSLLQCELVEGAVSK 652
                    +C  ++ Q     L+N   A   +L     E YL + +          A  +
Sbjct: 292  KLWSSRKTYCYDQLKQ-----LKNKAEAMADELGTSVMEGYLRQCI----------ATFE 336

Query: 653  KDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG---KVTPKVQSL 709
            K A + D +   ++  TNE +       H+++  +   +   ++V+DG    ++ KV  L
Sbjct: 337  KMAGIFDQQ--LLDLSTNERQ-------HLLNVFKRFPLHNPSSVSDGILDNLSQKVNIL 387

Query: 710  IKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQEMRTF 767
            +  L+ + +   DF  ++FVE+ V    L ++    P +   ++  + +G + S + ++ 
Sbjct: 388  VDTLVAEAEGNPDFTGLVFVEQRVWVASLAEILTCHPRTKHLLRVGTFVGTSQSSKRKSN 447

Query: 768  --------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
                      Q T+  FR G + L++ATSV EEG+D+  C++VI F+  K + +++Q RG
Sbjct: 448  ISVFAEPKNQQTTLDDFRAGIINLVLATSVLEEGIDVSSCHLVICFEQPKNLKSFVQRRG 507

Query: 820  RARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVP 879
            RAR+  S Y++ +     S+   +++ ++ E  +R+      D   ++       VD   
Sbjct: 508  RARQQRSRYLVFVPDN--SNVQSVKSWQSLEAEMRRAY--EDDKRKVRLAQEQEQVDEYG 563

Query: 880  GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ 939
                ++ESTGA+++L +A   +H +C++L S  Y+ + PEF    H++     + + K+ 
Sbjct: 564  ERHLRIESTGALLTLENASQHLHHFCARLGSGTYANITPEFDFT-HDR----GQITAKVT 618

Query: 940  LPCNA-PFEKLEGPVCS--SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVD 996
            LP +  P  +    + +  + R+AQ+ V   A K L+      D LLP +   E Q    
Sbjct: 619  LPISVDPKVRTARSLKTWVTERMAQKDVAFEAYKALYHTKLVNDNLLPVRDDEEDQMAQY 678

Query: 997  QNDEGEP 1003
            Q  E  P
Sbjct: 679  QVREDRP 685



 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 244/592 (41%), Gaps = 125/592 (21%)

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
            ++ L P  EH  + E         T    L    C +  LP S        PSI+ ++E 
Sbjct: 883  RDFLHPVSEHDNKNEA-------YTRIENLVASACTVENLPVSYAIFGLLFPSIVHKLEI 935

Query: 1368 MLLAIQLKDKINYPVPASKI-----LEALTAASCQETFCYERAELLGDAYLKWVVSRFLF 1422
             ++A  L+  +  PV    +     + ALT+++  E   Y+R E LGD  LK++ S  L 
Sbjct: 936  YIVADTLRTTLLNPVEVDNLHLPILVTALTSSALNEGNDYQRLEFLGDCILKFIASLHLM 995

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDT 1482
                Q  EG LT  + ++VSN  L +  L+ GL  YI   RF  ++W    +  V  E T
Sbjct: 996  AANLQMPEGMLTGKKGKLVSNGYLARATLAAGLDQYIFHKRFTGAKWRPRYISQVLAEST 1055

Query: 1483 KDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEAL 1542
                     QEKS                                    SK +ADV+E+L
Sbjct: 1056 LPEK-----QEKS------------------------------------SKLIADVIESL 1074

Query: 1543 IGVYYVEGGKDAANH-------LMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHAL 1595
            IG  Y+ GG   A         L +W  +    D      P +   +            +
Sbjct: 1075 IGASYIIGGFPKAFACVQTLLPLERWTPLSEAKDILYDAAPHQDTVM--------SLGLV 1126

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            E  L  KF ++ LL+EA+TH +      +C Y+R EF+GDAVLD+++++ LF     L  
Sbjct: 1127 EKLLGYKFTNKALLLEALTHVTFRGLNTNCSYERHEFLGDAVLDYIVSRRLFAHKPELSH 1186

Query: 1655 GRLTDLRAAAVN------------------NENFARVAVKHK-LHVHLRHGSSAL----- 1690
             ++  +R A VN                  N++     V H+ L   LR  S+AL     
Sbjct: 1187 RKMHGIRTAMVNASFLAYSMFETTVTDELTNKDTLEPEVHHRALWQFLRSTSNALVASRI 1246

Query: 1691 -----DRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
                   + R+ +   L+   +  +++  L D   PK L DIVES+ GA+++DS    ++
Sbjct: 1247 VATQQHAEAREIIATGLKHDSRFPWHALSLTD--PPKYLSDIVESVIGALYIDSHGSIAI 1304

Query: 1746 VWQVFQPL-----LDPMVTPETLPMHPVRELQERCQQQAEGLEYKASR-SGNLAT----- 1794
              +  + L     L+ ++      +HP    +ER    A     K +R + NL +     
Sbjct: 1305 CEEFVRRLGIISCLERILRDGVDCLHP----KERLGILAVDKSVKYARVTSNLKSEGARD 1360

Query: 1795 ---------VEVYIDGVQV-GVAQNPQKKMAQKLAARNALAVLKEKETAEAK 1836
                     V+V I G  V GV +  ++  A+ +AA  A+ VL+ ++T + K
Sbjct: 1361 SGVPEKGYKVQVKIGGKDVGGVVEGVKRLQAETIAAWKAIGVLEGRDTEDVK 1412


>gi|193787170|dbj|BAG52376.1| unnamed protein product [Homo sapiens]
          Length = 820

 Score =  176 bits (445), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 340  FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 391

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 392  -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVGF-WNPSEENCGVDTGKQSISYDLHTE 449

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 450  QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 509

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 510  SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 569

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 570  KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 629

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 630  LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 689

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 690  SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 749

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 750  SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 807

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 808  RSLKANQ 814



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 195  ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 254

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 255  YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 293



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 193  GLILQALT-LSNASDGFNL-ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 250

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 251  NCNLYRLGKKKGL 263



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 542  IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 589

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 590  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 649

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 650  YDYHKYFKA 658


>gi|449453708|ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
          Length = 275

 Score =  176 bits (445), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 140/233 (60%), Gaps = 8/233 (3%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L  +F+D+ LL EA T AS      S ++RLE+VGD+VL+ LIT+  +FS  NL P
Sbjct: 37   IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSP 96

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT LRAA V+ E  ARVA+ H  H +LRH  + L ++I +F + + E  L        
Sbjct: 97   GSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIEEYPLHSN----- 151

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQER 1774
             G  KAPKVL DIVES  GA+F DS      VW++F+ L++P++T +T+  HP+ EL E 
Sbjct: 152  -GMIKAPKVLADIVESTIGAVFADSNF-IDTVWKIFKELMEPLITLKTMKKHPMTELTEM 209

Query: 1775 CQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            CQ+++  LE++  R      +EV I+   VG     +K +AQ  AA+NAL  L
Sbjct: 210  CQKRSLKLEFR-DRWEETKEIEVLIEKQVVGKGSYRKKLIAQNRAAKNALENL 261



 Score = 45.8 bits (107), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 1378 INYPVPASKILE-ALTAASCQETFC--YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            +NY     ++LE A T AS     C  +ER E +GD+ L ++++R  +   P    G LT
Sbjct: 41   LNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLT 100

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R+R   V    L + A++ G   Y++ ++
Sbjct: 101  RLRAANVDTEKLARVAITHGFHRYLRHNK 129


>gi|147770295|emb|CAN62473.1| hypothetical protein VITISV_005321 [Vitis vinifera]
          Length = 287

 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/234 (44%), Positives = 141/234 (60%), Gaps = 13/234 (5%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             +E  L   F ++ LL EA THAS   +  S Y+RLEF+GD+VL  LITK  FF Y +L 
Sbjct: 32   GVEQILGYSFTNKRLLEEAYTHASCQKNQFS-YERLEFMGDSVLSLLITKEQFFLYPDLQ 90

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            PGRLT LR+A V+ E  ARVA+KH LH  LRH    +++QI +F + + E  L       
Sbjct: 91   PGRLTRLRSANVDKEKLARVALKHGLHRFLRHKKPKIEQQIYEFAEAIKEYPLHSN---- 146

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
              G  + PKVL D+VES  GA+F+D       V +VF+ LL+PM+ PETL +HPV EL E
Sbjct: 147  --GQIEVPKVLADVVESTIGAVFVDCNCSVDTVXKVFKGLLEPMIVPETLKVHPVTELNE 204

Query: 1774 RCQQQAEGLEYKAS--RSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNAL 1824
            RCQ++   LE+K S  R G+   ++ YI+    G  + P +K +A   AA+ AL
Sbjct: 205  RCQKRGLKLEFKDSWQRRGD---IDFYIEDYFAGRGEYPLRKDIALNRAAKAAL 255



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 42/162 (25%)

Query: 1389 EALTAASCQET-FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            EA T ASCQ+  F YER E +GD+ L  ++++  F  YP    G+LTR+R   V    L 
Sbjct: 49   EAYTHASCQKNQFSYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLA 108

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + AL  GL  ++        R   P +           +  +++  +++ E  L +    
Sbjct: 109  RVALKHGLHRFL--------RHKKPKI-----------EQQIYEFAEAIKEYPLHS---- 145

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
                     +G++E           K LADVVE+ IG  +V+
Sbjct: 146  ---------NGQIE---------VPKVLADVVESTIGAVFVD 169


>gi|302694007|ref|XP_003036682.1| hypothetical protein SCHCODRAFT_102832 [Schizophyllum commune H4-8]
 gi|300110379|gb|EFJ01780.1| hypothetical protein SCHCODRAFT_102832, partial [Schizophyllum
            commune H4-8]
          Length = 1489

 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 240/524 (45%), Gaps = 43/524 (8%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD-KINYPVPASKILEALTAA 1394
            ++ PELCF   +P S++R A  LPS++ R++ + L  +L     N+ +    +  ALT  
Sbjct: 945  YMIPELCFKITIPASVMRTALLLPSVLTRIDEIFLVKELNAIHFNHIIAEDLLHAALTTP 1004

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLF-LKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            S      YER EL GDA+LK++ S  LF + +    EG+L   R+ ++SN  L + +L+ 
Sbjct: 1005 SAGFDRNYERLELYGDAFLKYLASLHLFVMSHHNDSEGKLHAARRPLISNQKLMECSLAL 1064

Query: 1454 GLQSYIQADRFAPSRWAA-------PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            GL S++    F    W         PG      E  K+ +     +    A D +G ++ 
Sbjct: 1065 GLPSFVIGKPFVIRFWGPANFRMNPPGG---SAEKGKEKEQGKVAETPPPASDAVGANQG 1121

Query: 1507 YNEYEDDDMEDGEL-EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
                     +  +    D    ++LS K LADVVEA++G  ++  G+D    + K +G+ 
Sbjct: 1122 EGGGGKKRRKKKKGEPNDGQIQQMLSDKALADVVEAILGAAHLSAGRDGGLQVAKALGLP 1181

Query: 1566 VESDPE-------EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
            V  + +       +V   + P+ V  S LR      ++  +  K     LL  A+THA+ 
Sbjct: 1182 VAKNADIWDDFKAQVSMHATPSAV--SFLRPGTIDGVQSVIGQKLNKPELLALALTHANN 1239

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
             SS +  Y+R+EF+GDA+LD  + ++++  YT  PP  LT L++A V N   A +  +  
Sbjct: 1240 -SSPLGNYERIEFLGDALLDFQVVEYVYRKYTQQPPSVLTLLKSAMVGNSPLAAICAESG 1298

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPK-------VLGDIVESI 1731
            L+ HL   S     QI+  +   L  L K     +   D    +        L DIVESI
Sbjct: 1299 LYRHLHQKS----HQIQQSINTYLTALQKAKQKEYAAADDDLRERGQYWFDALSDIVESI 1354

Query: 1732 AGAIFLDSGRDTSVVWQVFQPLLDPM----VTPETLPMHPVRELQERCQQQ-AEGLEYKA 1786
             GAI++    + + V Q+F+  L P     +   TL +HP + L E  Q Q    LE   
Sbjct: 1355 VGAIYISDDLEWTGVQQLFKHFLQPFYEKHIRMNTLAVHPTKILLELVQSQCCHKLELVK 1414

Query: 1787 SRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
            S S       V + G  +      +  +   LAAR A ++   K
Sbjct: 1415 SASAGQTQCNVLLHGAVIAS----KTAVNGVLAARGASSIALNK 1454


>gi|357462175|ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
 gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
          Length = 565

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 142/234 (60%), Gaps = 8/234 (3%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
             H +E  L+ +FK++ LL EA TH +  +     Y+RLE+VGD+VL+ +ITK  F +Y  
Sbjct: 227  LHEVEAILEYEFKNKLLLEEAFTHGTYGAENGLSYERLEYVGDSVLNLMITKEQFQAYPT 286

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
            L PG LT LRAA V+ E  ARVA+KH LH +LRH    L  QI++F K + E  L    +
Sbjct: 287  LAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKGIAEYPL----H 342

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
            S GL D   PK L DIVES  GAIF+D G     VW+VF+ LL+P++ P T+  HPV EL
Sbjct: 343  SNGLID--VPKSLADIVESTIGAIFVDCGSSVETVWKVFKKLLEPIIDPNTIQRHPVTEL 400

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVA-QNPQKKMAQKLAARNAL 1824
             E CQ+++  L+++      +  +EV I+   VG      +K++A   AA+NAL
Sbjct: 401  HEVCQKKSLKLQFRDLWKETM-RIEVLINEEFVGSGVYGSKKEIAHNRAAKNAL 453



 Score = 45.1 bits (105), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)

Query: 1359 PSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--CQETFCYERAELLGDAYLKWV 1416
            P  +  VE+ +L  + K+K+        + EA T  +   +    YER E +GD+ L  +
Sbjct: 224  PPPLHEVEA-ILEYEFKNKL-------LLEEAFTHGTYGAENGLSYERLEYVGDSVLNLM 275

Query: 1417 VSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            +++  F  YP    G LTR+R   V    L + A+  GL  Y++
Sbjct: 276  ITKEQFQAYPTLAPGHLTRLRAANVDTEKLARVAIKHGLHRYLR 319


>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
          Length = 1532

 Score =  175 bits (443), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/311 (36%), Positives = 160/311 (51%), Gaps = 30/311 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI----CNDLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK KNTI  L+TG+GKTLIA LL+R I      D     +K +A FLV K
Sbjct: 114 REYQIELFERAKSKNTIVVLDTGSGKTLIAALLLRHILEKEIEDRATGQQKRIAFFLVDK 173

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+     + V  +CG+M  + W  + W ++F+   V+V TA IL   L HS
Sbjct: 174 VSLVFQQHAVLECNLEHPVARFCGDMVDEMWSREFWAQKFEENMVIVCTAAILQKCLTHS 233

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+ME INLLI DE HH  K HPY+ ++ +FY       KRP + GMTASPV+     +Q
Sbjct: 234 YIRMEQINLLIFDEAHHTKKNHPYARIIKDFYIKEPDANKRPRILGMTASPVD-----AQ 288

Query: 480 VDCAIKICNLESKLDSVVCTIKD---------RKELEKHV-----PMPSEVVVEYDKAAS 525
            D  I I  LE  L S + T+ +         RK  EK +     PMP E  + Y K  +
Sbjct: 289 TDIKIAIAQLECLLHSEIATVSEESLSRDSHVRKITEKEIHYSSLPMPYETEL-YQKINA 347

Query: 526 LWSLHEQLKQMEVAVEEAAQSS----SRRSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
           L   ++   + E+   +AA SS    +    WQ     +A  +   R     S    +D 
Sbjct: 348 LVGRNQHFSK-ELCFAKAATSSLGPWAADRFWQLFLTDEAIVRLTQRTEMSYSGLGSADR 406

Query: 582 AANLIQKLRAI 592
               +QKLR +
Sbjct: 407 ETAAVQKLRDV 417



 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 248/618 (40%), Gaps = 115/618 (18%)

Query: 1235 LEGRIVTAAHSGKR-FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQK----YGV 1289
             + ++V   ++G R FY+  +R +M      P  EG   P  +  + D   +K    Y V
Sbjct: 896  FQDKLVIDPYAGSRKFYLRGVRKDMKPTDPVP--EGAPDP-GHRPWRDPAVEKNIKEYSV 952

Query: 1290 ELIFKK---------QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPE 1340
             +  K          QP++    VS  +NLL    E + E+         K  Y+ L P 
Sbjct: 953  SMWMKSRAKRTWRDTQPVVEAEVVSLRRNLLDDFVEVTTEES--------KICYIILEP- 1003

Query: 1341 LCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE-- 1398
               +  LP   V  A   P+I+ R++++L+A+     ++  +     LEA+T  S     
Sbjct: 1004 -LRVSTLPIETVVMAFTFPAIIHRIDAVLIALDACKFLDLDIRPDLALEAVTKDSDNSDE 1062

Query: 1399 ------TF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
                   F       YE+ E LGD +LK   +  LF + P+ +E      R  ++ N  L
Sbjct: 1063 HGKNKINFQGGMGKNYEQLEFLGDCFLKMATTIALFTQNPEDNEFAYHVERMLLICNQNL 1122

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            +  A+ + L  Y+++  F    W   G+                         +L   K 
Sbjct: 1123 FNKAVDRSLPEYVRSKSFDRRSWYPSGL-------------------------RLIRGK- 1156

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK----DAA------- 1555
                          EG  +    L+ K++ADV EALIG  Y+   +    D A       
Sbjct: 1157 --------------EGSLNHRHALADKSIADVCEALIGAAYLSYAETNNFDMAIRAVTAM 1202

Query: 1556 ----NHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
                NHLM   G     D      PS       + ++      +++ L  +FK   LL  
Sbjct: 1203 VKNKNHLMTSWG-----DYYTAYTPSAWQSGHSTAMQKELARQIKENLGYEFKYPALLRS 1257

Query: 1612 AITHASRPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
            A  H S P +   +  YQRLEF+GDA+LD +    LF  + +  P  LT+ + A V+N+ 
Sbjct: 1258 AFKHPSYPRAYEDLPNYQRLEFLGDALLDMVCVDFLFKKFPDADPQWLTEHKTAMVSNQF 1317

Query: 1670 FARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC------KAPKV 1723
             A + V+  LH H+  G ++L  Q +DFV  VLE   +          C      +APK 
Sbjct: 1318 LACLCVQLGLHKHVLSGHASLLNQTQDFVG-VLECAKQDAAADGTFSQCYWIHVKQAPKF 1376

Query: 1724 LGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQ 1778
            L D+VE+  GA+F+DSG D   V   F   + P  T   L       HPV  L    Q  
Sbjct: 1377 LSDVVEAYIGALFVDSGYDYGQVRGFFDAHIRPFFTDMALYDSFASRHPVTNLTRILQDD 1436

Query: 1779 AEGLEYKASRSGNLATVE 1796
                E++   S    +VE
Sbjct: 1437 LGCQEWRLMVSEVAPSVE 1454



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 136/263 (51%), Gaps = 23/263 (8%)

Query: 722 FRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNNSQEMRTFQMQE---TIAKFR 777
           +R I+FVE  + A++L  +F +    LS++  A L+G  +   +     ++   TI +FR
Sbjct: 454 YRCIVFVEMRLTAVLLADLFKQNHIKLSYLNPAVLVGSQSDTGLANMSFKQQVLTIHRFR 513

Query: 778 DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
              V  L AT VAEEGLDI  CN+++RFDL K+V+ YIQS+GRAR+  S+YI  IE GN 
Sbjct: 514 HAEVNCLFATQVAEEGLDIPDCNLIMRFDLYKSVIQYIQSKGRARRQDSEYISFIEGGNG 573

Query: 838 SHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV--------YQVESTG 889
             A  +  A   +  LR+        + L +  +++  D     +        Y ++STG
Sbjct: 574 RQARMVLQATYDQSVLRRFC------NALPEDKKIMGFDVKASILKGDLHYKSYLIKSTG 627

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
           AV++  S++ ++  + + L      +  PE+++       G T +  ++QLP  +P   +
Sbjct: 628 AVLTWTSSLEVLANFAASLRQSNDEVCAPEYVVINQ----GQT-FVAEVQLPERSPIMHV 682

Query: 950 EGPVCSSMRLAQQAVCLAACKKL 972
            G   S+ + A+ +     CK+L
Sbjct: 683 AGFPQSNKQAARCSAAFEMCKEL 705


>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
           MF3/22]
          Length = 1473

 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/253 (41%), Positives = 145/253 (57%), Gaps = 23/253 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++ EQA+  N IA L+TG+GKT IA LLI+ + +   +  KK   VFLVPKVPLV
Sbjct: 13  RAYQEEIFEQAQNGNVIAALDTGSGKTFIAALLIKWVMSQPSQAGKK--TVFLVPKVPLV 70

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ +V+ +QT  +V  Y G MG D WD  RW+ EF     LVMTAQI  NIL H    +
Sbjct: 71  DQQRDVLSKQTPLIVRGYVGAMGVDAWDKGRWELEFLQSDCLVMTAQIFKNILVHGYWSL 130

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + + LLI DECHHA K HPY+ +M + Y   S E +P +FGMTASP+  +    +     
Sbjct: 131 DQVALLIFDECHHARKYHPYNAIMVDHYR--SSEWKPKIFGMTASPIWNREKPLE----- 183

Query: 485 KICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAA----------SLWS-LH-- 530
            I  L++ L S V  ++   + L++HV  P E++V Y   +          SLW  LH  
Sbjct: 184 SIETLQNNLCSKVIAVRQHMDLLDQHVNRPIELIVRYQNPSDEHYDTYYKPSLWDYLHSD 243

Query: 531 EQLKQMEVAVEEA 543
           EQ+    +A+ +A
Sbjct: 244 EQVISPILAIRDA 256



 Score =  156 bits (395), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 158/597 (26%), Positives = 259/597 (43%), Gaps = 90/597 (15%)

Query: 1276 YSSYADYYKQKYGVELIFKKQPLIR------GRGVSYCKNLLSPRFEHS------EEQEG 1323
            + +YA Y++ KY  +  +KK   +R      GR V   +    PR+  S         + 
Sbjct: 844  FDTYAAYFEAKYSFK--YKKTEHVRIVATASGRIVEVSE---MPRYPSSGYNFRVSRPQQ 898

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-V 1382
            +  +         LP   C        +V   Q   S  +RV  +  A   ++ + YP +
Sbjct: 899  DAYDTQQSMATFLLPESYCRRALFHMDIVEAFQVFASACQRVCDVFRARVARNFLKYPPI 958

Query: 1383 PASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            P + I+EALT  S    F  +R E +GD+ LK  V  ++F  +P +HEGQLT +++  VS
Sbjct: 959  PDNLIVEALTLPSAMAGFNNQRLETMGDSVLKLSVVVYIFNAFPNRHEGQLTALKENSVS 1018

Query: 1443 NLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            N +L   A    L+ ++ ++  +   W        F+  +            S+   K+G
Sbjct: 1019 NRLLLARAKEVHLERFLTSENRSMRTWR-------FERSSV----------TSLGTCKIG 1061

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
            +                 E  + ++R    ++L D +EA +G  YV GG + A      +
Sbjct: 1062 S-----------------EEIALAHRTFPRRSLQDCMEASLGAAYVAGGLNFALQTGTAL 1104

Query: 1563 GIQVESDPEEVGCPSRPACVPES------VLRSVDFHALEDALKIKFKDRGLLVEAITHA 1616
            G+          C   P   PE       V  +  F  L++ L+  F++  LLVEA+ H 
Sbjct: 1105 GL----------CFGGPTPWPERYPLTEFVPPAALFGKLQEDLQYTFRNGKLLVEAVKHP 1154

Query: 1617 SRPS-SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
            S        CYQRLEF+GDAV++ ++T +L+  +     G+++  RA A+ N   A +AV
Sbjct: 1155 SFDFLENYPCYQRLEFLGDAVIELVVTTYLYNKFPGANSGQMSWARARAICNTTLAALAV 1214

Query: 1676 -KHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK--APKVLGDIVESIA 1732
             +  LH +L      L     D  KEV E L    +    L D +   PKVLGDI ES+ 
Sbjct: 1215 NRLSLHKYLLANCVELS---EDVAKEV-EILSAASYEDVSLNDWRYDPPKVLGDIFESVI 1270

Query: 1733 GAIFLDSGRDTSVVWQVFQPLLDPMVT---PETLPMHPVRELQE--------RCQQQAEG 1781
            GA+F+DSG D ++   + + L+  ++    P+ +P  PV  L +        R + Q   
Sbjct: 1271 GAVFVDSGFDYTITAPIIEELMKDVLVLLHPD-IPYDPVSRLLQWVAKSGCMRAKFQRTQ 1329

Query: 1782 LEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
               + +R   +  V +  D +  G      K +A+ L A  A+ VL +  +  A  K
Sbjct: 1330 TNPRVNRKDGV--VVLIHDRIVAGPITAANKPLAKGLVAEKAMQVLADGSSEFALRK 1384



 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 30/308 (9%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE-LPSLSFVKSASLIGHNN 760
           ++PK+++ + IL+K++ +E F+ IIFV +   A  L  +    L + ++++   LIGH  
Sbjct: 352 LSPKLRAAVDILVKHR-SESFQGIIFVNQRQVAKALSWILGRVLETKTWLRCGELIGHGE 410

Query: 761 SQE-------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           S +       M   + ++ +  FR G + LL+AT V EEGLD   C +VIR+D  K ++ 
Sbjct: 411 SSKSSSSGKGMDIKRQRDIVQSFRSGNLNLLIATDVGEEGLDFPACALVIRYDSVKHMVG 470

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT----------DL 863
           Y+QSRGRAR+  S Y++M    +       +  RN+E  LR   + +T          D 
Sbjct: 471 YVQSRGRARQQNSTYVVMAAENDAQEIARYKGLRNAEPELR--IVYQTMNAGGSSGELDN 528

Query: 864 SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS-ILRPEFIM 922
               D   +  +D      Y + STGA ++ +SA+ L+  +CS +P D Y+  L+P++I+
Sbjct: 529 GDELDNDYVDPLDLASRETYTIPSTGATLTYSSAISLLSHFCSLIPGDSYTRSLQPKYII 588

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEK----LEGPVCSSMRLAQQAVCLAACKKLHEMGAF 978
           E  +K    TE++  L LP   P         GP   S + A++AV   A + LH +G F
Sbjct: 589 ESADK----TEFTATLHLPRALPLTSDQLLYNGPPKRSKKEAKRAVAFIAMRMLHTLGIF 644

Query: 979 TDMLLPDK 986
            D L P K
Sbjct: 645 DDYLSPIK 652


>gi|251765118|sp|Q6ATG6.2|RTL2_ORYSJ RecName: Full=Ribonuclease 3-like protein 2; AltName:
            Full=Ribonuclease III-like protein 2; Short=RNase
            III-like protein 2
          Length = 317

 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 171/314 (54%), Gaps = 25/314 (7%)

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            DP E+  P   A   E+  R      +E  L+ +F+D  LL EA+TH S     VS YQR
Sbjct: 20   DPVELPPPGFVADRAEAAAR------VERLLRYQFRDGRLLEEALTHQSFADDAVS-YQR 72

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEFVGD+ L    +  L+ +   L PG L+ LRAA ++ E  ARVAV+H L+  LR    
Sbjct: 73   LEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCP 132

Query: 1689 ALDRQIRDFVKEVLEELLKP----GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
             LD  +  F++ V +E   P        +G    KAPKVL DIVE+IA A+++D   D  
Sbjct: 133  RLDLLVGQFIETVKQE---PEDDLSTVPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLE 189

Query: 1745 VVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQV 1804
             +W+V + L +P++T ET+   PV  L E CQ+  +  ++K  + G +  V V++ G  V
Sbjct: 190  KLWKVTRWLFEPIITAETIDEQPVTMLHELCQKHGKMAQFKTWQKGGMTVVNVFVAGELV 249

Query: 1805 GVAQNPQKKMAQKLAARNA---LAVLKEK--ETAEAKEKGDENGKKRKNGTQTFTRQTLN 1859
            G+  + QK +A+  AAR+A   LA  K++   T      GDE G+ R+       +Q LN
Sbjct: 250  GIGSSEQKVIAKLNAARDATRKLAGAKKQVLTTGVGNGLGDEIGELRE------CKQKLN 303

Query: 1860 DICLRRNWPMPLYR 1873
            + C R+NWP P+++
Sbjct: 304  EQCSRQNWPKPIFK 317


>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
 gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
          Length = 1018

 Score =  175 bits (443), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 235/489 (48%), Gaps = 77/489 (15%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPAS----------- 1385
            L PELC  + L  S+ +    +PS + R+E++LLA +LKD +   +P +           
Sbjct: 565  LIPELCKRYFLSASVWKVITCIPSFLWRMETLLLAHELKDVLFGSIPINGISISKNQTFT 624

Query: 1386 -KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
             K+LEALT A  ++    ER E LGD++LK++++  LF+ +P+ HEGQLT    ++V N 
Sbjct: 625  LKLLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRND 684

Query: 1445 VLYQYALSKGLQSYIQADRFAPSR---WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
             L +   S  +  YI    F   +   W  PG                          KL
Sbjct: 685  NLLKLGKSTPICEYIIGKPFNLLKNEGWIPPGY-------------------------KL 719

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSS-SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
             + K  N    D+    +L+GD + +++  SSK++ADV++A++    +E  +  A + + 
Sbjct: 720  LSSKVKNL---DEKVTSDLDGDKAVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFIS 776

Query: 1561 WIGIQVESDPEEVGCPSRPACVPE----------SVLRSVDFHALEDALKIKFKDRGLLV 1610
            W+    + D +     S  + +P+           +  + +   LE  +   F+++  ++
Sbjct: 777  WL----DKDIKFTINASAASLLPDDDNISSNEINKIYETNNLERLEKVIGYSFQNKLFMI 832

Query: 1611 EAITHAS--RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
             A+TH+S       +   Q+LEF+GD +L ++I +H F S+ +  P +L D + A VNN+
Sbjct: 833  RALTHSSYHHHDIAIESNQKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNK 892

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL-----------KPGFNSFGLGD 1717
              A + +   +  ++   S  L R I  F K +  + +           +  F +F   +
Sbjct: 893  CLAVIGIAIGVSKYVFQESPDLFRDIDQFAKIITCDYMIDDEMNYNDRTEALFENFT-EE 951

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             K PK + D+VE++ GAI++D+G   + V +   PLL P ++     +P+ P+R+L E+ 
Sbjct: 952  VKIPKPVSDVVEALIGAIYIDTGESIAEVTKALMPLLQPRISLVLRDIPISPIRQLYEKV 1011

Query: 1776 QQQAEGLEY 1784
                EG+ +
Sbjct: 1012 ---PEGVSF 1017



 Score =  159 bits (403), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 11/223 (4%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND-----LQRQNKKMLAVFL 357
           + R YQ ++LE A + N I  L TG+GKT IAV+LI+ + ++     L +  KK    FL
Sbjct: 18  KPRAYQSELLEAALRSNAIICLNTGSGKTFIAVMLIKKLQHEILPKPLDQGGKKTF--FL 75

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           V  VPL  QQ++V+R++T + VG Y G+   D W+  +W  E D++QVLVMTA IL  IL
Sbjct: 76  VNTVPLARQQSDVLRKETPFKVGDYVGD-DVDLWNKTKWVYELDSQQVLVMTADILAQIL 134

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
           +H  IK+  INLLI DECHHAV  H Y  +M ++ +   K K P +FGMTAS  + K   
Sbjct: 135 QHGYIKVSQINLLIFDECHHAVGNHTYVQIMRDYVYKEQKSK-PRIFGMTASVFHGKCRI 193

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
            Q++   KI +LE+ L S V T   R++L  H     E+++ Y
Sbjct: 194 GQIEN--KIRSLEAILLSRVVTTSYRQDLANHSTKAEEMLIPY 234



 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 160/341 (46%), Gaps = 65/341 (19%)

Query: 663 GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDF 722
           G +E     +E   +L S VV+     D+   +  A+  + P   +L+       ++ +F
Sbjct: 194 GQIENKIRSLEA--ILLSRVVTTSYRQDLANHSTKAEEMLIPYAINLLDNHRHKLNSRNF 251

Query: 723 RAIIFVERVVAALVLPKVFAELP----SLSFVKSASLIGHNN-------SQEMRTFQMQE 771
            AIIF E+   A  L  +  ++     + S +KS  ++GH         +  M   Q   
Sbjct: 252 CAIIFTEKRCVAYALSSILDKVAEHDNAFSCIKSDFVVGHGTRVSSSLVATNMSHNQQTR 311

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
            I KFR   V +LVAT+V EEG+D+ +CN+V+RFD  KT  +Y+Q++GRAR   + YI++
Sbjct: 312 AINKFRRQDVNILVATNVLEEGIDVPKCNLVVRFDEIKTFGSYLQAKGRARAQHAHYIIL 371

Query: 832 IERGNLSHA-----TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE 886
           +E+  ++ A     T+    R  ++  +  A+  T+  +L D     S++ VP   Y+VE
Sbjct: 372 VEKDKIADARDQFSTWSYLERYLQDQCQCRAV-GTEEDYLADD----SLNLVPP--YEVE 424

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF 946
           STGA V++++                                         +QLP ++P 
Sbjct: 425 STGAKVTMSNTT---------------------------------------IQLPSSSPL 445

Query: 947 -EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
            + + GP+  + + A+ +  L  C++LHE+G   D L+P K
Sbjct: 446 PDSITGPLAITEKRAKASTALLVCQELHEIGQLDDNLVPVK 486


>gi|336468520|gb|EGO56683.1| hypothetical protein NEUTE1DRAFT_123167 [Neurospora tetrasperma FGSC
            2508]
          Length = 1529

 Score =  174 bits (442), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 209/784 (26%), Positives = 327/784 (41%), Gaps = 176/784 (22%)

Query: 304  ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            AR YQL++ E + K+N I           +A +                   FL P V L
Sbjct: 76   ARAYQLEMFEASLKQNII-----------VARIW------------------FLTPTVAL 106

Query: 364  VYQQAEVIREQTGYVVG-HYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSI 421
              QQ +V++ Q   V     CG+ G D W  Q  W       +++V T QIL +   HS 
Sbjct: 107  ARQQHQVLQSQIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVSTYQILFDANAHSF 166

Query: 422  IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQ 479
            +++++++L+++DE H+    HP + +M+E Y    K     PS+ G+TASP+    ++  
Sbjct: 167  VRLDSLSLIVIDEAHNCSGSHPIARLMTEAYLPAKKAGLPVPSILGLTASPLKSNNLAD- 225

Query: 480  VDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEY-------------DKAAS 525
                  I  LE  LD+V  T    R+EL  HV  P  +VV Y             D    
Sbjct: 226  ------IEKLEQVLDAVCRTPTIHREELLAHVNRPEMLVVSYGDSKGPGTEPTPTDLMTR 279

Query: 526  LWSLHEQL---KQMEVAVEEAAQSSSRRSKW-QFMGARDAGAKEELRQVYGVSERTESDG 581
                + +L   K  +V + +A ++   R K  Q +  +D  A++ELR VY          
Sbjct: 280  FLEAYHRLDISKDPDVLLLKAQRTERAREKLRQMVTKKDTLAQKELRGVYN--------- 330

Query: 582  AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
             A L+++         E+G W A                          + YL++ VS +
Sbjct: 331  RALLVRR---------EIGPWAA--------------------------DYYLTRTVSHM 355

Query: 642  QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG- 700
              EL                           E GE    H   G     + I A   +  
Sbjct: 356  LAEL---------------------------ERGEPPAQHRYIGEALRSIPIPAISKEPI 388

Query: 701  KVTPKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGH- 758
            +++PKVQ+L+K+L  +Q  +D   I+FV ERV+ ++V   +     +    ++AS+IG  
Sbjct: 389  QLSPKVQTLLKVLASHQ--QDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTASMIGTA 446

Query: 759  ------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
                   N  +M   +   ++  FR GR  LLVATSV EEG+D+  CN+VI FD    + 
Sbjct: 447  SVPGKARNHMDMTKKEDMTSLEGFRRGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIK 506

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHATFLRN-ARNSEETLRKEAIERTDLSHLKDTSR 871
            ++IQ RGRAR+  S   LM++  +   A    N  R  +E    E  +  +L  L D   
Sbjct: 507  SFIQRRGRAREVSSTLYLMVQNASGESAMDWHNLERLMKERYEDEMRQNAELELLDDP-- 564

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIMER----HE 926
               + + P  V +VESTGA +++      ++ +C+++ S  RY    P F++ +      
Sbjct: 565  --RIGSYP--VLEVESTGARMTIRDVRSHLNHFCAKVSSRSRYLQKEPYFVIRQVSPDPA 620

Query: 927  KPGGPTEYSCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
             PG  T     + LP + AP     E L     +S +LA       A K L+  G   + 
Sbjct: 621  SPGRRTLLQATVHLPASLAPDLRRHESLW--TWTSEKLAIMDASFQAYKALYNAGLVNEN 678

Query: 982  LLPDKGS------GEQQEKVDQNDEGEPLPGTA-----------RHREFYPEGVADILQG 1024
            LLP K S      G+    +    + +P P  A           RH      GV   L+ 
Sbjct: 679  LLPTKVSDFLADLGDDPGHIWVKTQFDPWPEVAYAWQESASLYSRHLTVLVPGVEKPLEF 738

Query: 1025 EWIL 1028
            E+IL
Sbjct: 739  EFIL 742



 Score = 85.9 bits (211), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 145/337 (43%), Gaps = 65/337 (19%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK-DKI------NYPVP 1383
            K Y   LP     +   P    +    +P+  R VE  L+A  L  +++      N P+ 
Sbjct: 912  KLYRKVLPSTQIRMDNFPAVFAQVGAVIPAFTRAVEMSLVAADLMYNRLGCLQLDNLPL- 970

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKW---VVSRFLFLKY---PQKHEGQLTRMR 1437
               I  AL ++  +    YER E +GD  LK+   + +  L   +   P  HE  L++ +
Sbjct: 971  ---ITTALISSGSRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWK 1027

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVA 1497
             ++V+N+ L + +   GL  YI     A  +W      P F ED         D+ KS  
Sbjct: 1028 DKLVNNVRLCRASRDFGLDEYI-IHSAASKKWR-----PKFVED-------YLDEMKS-- 1072

Query: 1498 EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANH 1557
                                     +S+  R +SSK +ADVVE+LIG  Y+ GG   A  
Sbjct: 1073 ------------------------PESAETRQMSSKMVADVVESLIGAAYMCGGMSKALE 1108

Query: 1558 LMKWIGIQVESDP---EEVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
             +  +    +S     +E+   SR       P+  + S     LE A+   F  + LL+E
Sbjct: 1109 CVALLLPTPKSSQFKWQEISL-SRAQLFEFAPKDAILSKQLEPLEKAMSYTFHKKSLLIE 1167

Query: 1612 AITHASRP--SSGVSCYQRLEFVGDAVLDHLITKHLF 1646
            A+TH S    S+  SCY+ LEF+GDA+LD ++ K L 
Sbjct: 1168 AMTHPSCAGLSTNESCYELLEFLGDAILDVIVVKRLM 1204



 Score = 41.6 bits (96), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 1620 SSGVSCYQRLEFVGDAVLDH--LITKHLFFSYTNLPPGR----LTDLRAAAVNNENFARV 1673
            S G + Y+RLEF+GD +L     +T     ++ ++ P      L+  +   VNN    R 
Sbjct: 980  SRGPTNYERLEFIGDTILKFCACLTASALSAHHSIVPNHHERLLSQWKDKLVNNVRLCRA 1039

Query: 1674 AVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAG 1733
            +    L  ++ H S+A  +    FV++ L+E+  P           + K++ D+VES+ G
Sbjct: 1040 SRDFGLDEYIIH-SAASKKWRPKFVEDYLDEMKSP---ESAETRQMSSKMVADVVESLIG 1095

Query: 1734 AIFLDSG 1740
            A ++  G
Sbjct: 1096 AAYMCGG 1102


>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (442), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 189/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVLRSV-------------DFHALEDALKIKFKDR 1606
               P  ++P              P S L                 F   E++L  KF+DR
Sbjct: 1891 XRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATXELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (442), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 198/415 (47%), Gaps = 81/415 (19%)

Query: 1359 PSIMRRVESMLLAIQLK-----DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAY 1412
            P+  + + S LL          D + +P P+ S IL+ALT ++  +    ER E +GD++
Sbjct: 1635 PTPTKAITSALLPAGFSFDRQPDLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSF 1694

Query: 1413 LKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAA 1471
            LK+ ++ +L++ Y   HEG+L+ +R + V+NL LY+    K L  Y+ A +F P   W  
Sbjct: 1695 LKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLP 1754

Query: 1472 P--------------GVLPVFDE------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
            P                +P          D K+  S    +      D LG ++N     
Sbjct: 1755 PCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKADALGLEQN----- 1809

Query: 1512 DDDMEDGELEGDSSS---------YRVLSS-----KTLADVVEALIGVYYVEGGKDAANH 1557
                ++G+L+  + S         Y ++S      K++AD VEALIG Y +E G   A  
Sbjct: 1810 -GGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALL 1868

Query: 1558 LMKWIGI-------QVESDPEEVGCP--SRPAC-----------VPESVL--------RS 1589
             M W+G+       Q++   +E   P  ++P              P S L          
Sbjct: 1869 FMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEE 1928

Query: 1590 VD-----FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITK 1643
            +D     F   E++L  KF+DR  L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+
Sbjct: 1929 LDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITR 1988

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            HL+       PG LTDLR+A VNN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 1989 HLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|193786026|dbj|BAG51002.1| unnamed protein product [Homo sapiens]
          Length = 554

 Score =  174 bits (442), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 74   FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 125

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 126  -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 183

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 184  QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 243

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 244  SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 303

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 304  KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 363

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 364  LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 423

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 424  SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 483

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 484  SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 541

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 542  RSLKANQ 548



 Score = 50.1 bits (118), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 276  IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 323

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 324  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 383

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 384  YDYHKYFKA 392


>gi|444518375|gb|ELV12129.1| Endoribonuclease Dicer [Tupaia chinensis]
          Length = 974

 Score =  174 bits (441), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 228/487 (46%), Gaps = 88/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 493  FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKPSLGSMP 544

Query: 1477 V---FDE-DTKDGDSSLF-DQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYR 1528
                FD+ D    D+  + D  K+V ED       +N  E+    D     +  D  + +
Sbjct: 545  FASEFDDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEESCGVDTGKQSISYDLHTEQ 603

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCP------- 1576
             ++ K++AD VEAL+G Y    G+ AA   +  +G++V      + PE+  CP       
Sbjct: 604  CIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTGPEKAVCPAQEDSSS 663

Query: 1577 -----------------SRPA--------CV---PESVLRSVD-----------FHALED 1597
                             SRPA        C+   P  +    D           F   E 
Sbjct: 664  QQKALSVSCAAATPAASSRPAPLKDLEYGCLKIPPRCMFDHPDADKTLTHLISGFENFEK 723

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 724  KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 783

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 784  LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 843

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 844  SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 903

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 904  SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 961

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 962  RSLKANQ 968



 Score = 77.8 bits (190), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 348  ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 407

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 408  YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 446



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 11/112 (9%)

Query: 1577 SRPACVP--ESVLRSV-DFHALEDALKIKFKDR------GLLVEAITHASRPSSGVSCYQ 1627
            S PA  P    V R++ D  A E + ++ +  R      GL+++A+T  S  S G +  +
Sbjct: 307  STPAAGPGAPGVARALQDRLASEQSPRVGYSPRTLGPNPGLILQALT-LSNASDGFN-LE 364

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+N N  R+  K  L
Sbjct: 365  RLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGL 416



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 696  IPPRCMFDHP------DADKTLTHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 743

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 744  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 803

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 804  YDYHKYFKA 812


>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEKFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557



 Score = 47.4 bits (111), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRS-VDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
            ++++ D  E+  P+    +  ++L +   F    D +        ++++A+T  S  + G
Sbjct: 1623 LKLQYDRMEIQPPTSTKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALT-MSNANDG 1681

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            ++  +RLE +GD+ L + IT +L+ +Y N+  G+L+ LR+  V N N  R+  + +L
Sbjct: 1682 IN-LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRL 1737


>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 KRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDHLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
          Length = 1404

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/215 (44%), Positives = 123/215 (57%), Gaps = 9/215 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC----NDLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK +NTIA L+TG+GKTLIAVLL++       ND     +  +A FLV  
Sbjct: 111 REYQLELFERAKAQNTIAVLDTGSGKTLIAVLLLKHTLEKELNDRAEGKQHRIAFFLVDS 170

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L YQQA V+R      VGH+ G MG D W    W++ F    V+V TA+IL   L +S
Sbjct: 171 VTLAYQQAAVLRNNLDQSVGHFFGAMGTDLWSKSVWEQHFQKNMVIVCTAEILNQCLLNS 230

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            +KM  INLLI DE HH  K HPY+ ++ E Y      KRP +FGMTASP++ KG     
Sbjct: 231 YVKMSQINLLIFDEAHHTKKDHPYARIIRESYLEEDPSKRPRIFGMTASPIDTKG----- 285

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSE 515
           D   +   LE  LDS + T  +   L + V  P E
Sbjct: 286 DIVDEATRLEKLLDSRIATTSNMSLLRQVVRRPVE 320



 Score =  144 bits (363), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 205/471 (43%), Gaps = 78/471 (16%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF + P   E      R  ++ N  L+  A+ K +  YI++
Sbjct: 958  YERLEFLGDCFLKMATSIALFTQNPDDDEFDYHVNRMCLICNKNLFNAAVKKEIYKYIRS 1017

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                         KL   K+++            +
Sbjct: 1018 RGFSRHTWYPEGL-------------------------KLLQGKDHSR-----------K 1041

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPA- 1580
              + S   L+ KT+ADV EALIG   + GG +          + V++    V  PS  A 
Sbjct: 1042 ATTESKHALAEKTIADVCEALIGASLLSGGPEHR------FDMAVKAVTTLVNSPSHMAE 1095

Query: 1581 ---------CVPESVLRSVD---FH---ALEDALKIKFKDRGLLVEAITHASRPSS--GV 1623
                      +P+   R+ D    H    +E+ L  +F+   LL  A TH S PS+   V
Sbjct: 1096 RWKDYISLYTIPKYQRRAADGAEIHLCRKVEEKLSYRFRYPTLLGSAFTHPSYPSAWAKV 1155

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GD+++D +  + LF  Y +  P  LT+ + A V+N+    +AVK  LH HL
Sbjct: 1156 PCYQRLEFLGDSLIDMVCVEDLFARYPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHL 1215

Query: 1684 RHGSSALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1742
            ++ S+ L  QI  + +E+   E        +       PK L D+VE+  GA+F+DSG +
Sbjct: 1216 KYFSAPLQSQITQYAEEIQTAEGESESAVDYWTVTKDPPKCLPDMVEAYVGAVFVDSGFN 1275

Query: 1743 TSVVWQVF----QPLLDPMVTPETLP-MHPVRELQER----------CQQQAEGLEYKAS 1787
              V+ + F    +P  + M   ++    HP   L  R          C +  E      +
Sbjct: 1276 FEVIEEFFRDHIKPFFEDMAIYDSFANKHPTTFLHNRLTNEFGCMNYCLKAGEMPSIDGA 1335

Query: 1788 RSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
             +G LA V V+   +  G A +   + A+  A+  ALAVL E  +A  + K
Sbjct: 1336 PAGVLAAVIVHDVVIAEGTASS--GRYAKVKASERALAVLDELSSAAFQRK 1384



 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 32/287 (11%)

Query: 700 GKVTPKVQSLIKILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
           G+++PKVQ L + L  Y  + TE  + I+F ++   AL+L ++F  L ++ F++   LIG
Sbjct: 413 GQLSPKVQVLREELAHYFGRPTET-KCIVFTQKRYTALILSELFQTL-NIPFIRPGVLIG 470

Query: 758 HNNSQEMR---TFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
             +        TF+ Q  ++ KFR G +  L ATSVAEEGLDI  CN+V+RFDL +T++ 
Sbjct: 471 VRSGDLAGMNITFRQQFISLVKFRTGEINCLFATSVAEEGLDIPDCNLVVRFDLYQTLIQ 530

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           Y+QSRGRAR   S Y  M+ERGNL H   L   +++E+ ++     RT    L +   L 
Sbjct: 531 YVQSRGRARHFNSTYASMVERGNLDHEQRLLEVQDAEKMMQNFC--RT----LPEDRLLY 584

Query: 874 SVDAVPGTV---------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
            +D    TV         ++++STGA ++ +SA  ++  Y S L  ++    +  +++  
Sbjct: 585 GIDHDLDTVLQKDEGNRTFKIKSTGAKLTYHSATAILARYASSLQYEKEISAQVTYVV-- 642

Query: 925 HEKPGGPTE--YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
                 P    + C++ LP  +P   L G       +A+++     C
Sbjct: 643 -----LPINGAFVCEVILPEKSPIRGLTGSPAMKKSIAKRSAAFDTC 684



 Score = 45.8 bits (107), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            CY+R E LGD+ +  V    LF +YP +    LT  +  MVSN  L   A+  GL ++++
Sbjct: 1157 CYQRLEFLGDSLIDMVCVEDLFARYPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLK 1216


>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 25/153 (16%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557

Query: 833 ERGNLSHATFLRNARNSEETLRKEAIERTDLSH 865
                S                 E++E TD SH
Sbjct: 558 APSYTSPTV--------------ESVELTDRSH 576


>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (441), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 70.9 bits (172), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (440), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  174 bits (440), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 188/393 (47%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
              Y ++S      K++AD VEALIG Y +E G   A   M W+G++V     ++   ++ 
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1580 ACVPESVLRSVD---------------------------------FHALEDALKIKFKDR 1606
              +P S   + +                                 F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTSRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  174 bits (440), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|6102924|emb|CAB59269.1| hypothetical protein [Homo sapiens]
          Length = 525

 Score =  174 bits (440), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 225/484 (46%), Gaps = 89/484 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 45   FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 96

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 97   -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 154

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP+R    
Sbjct: 155  QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFN 214

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 215  SQQKNLSVSCAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 274

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 275  KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 334

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 335  LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 394

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++      +P 
Sbjct: 395  SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPR 454

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AA+ AL
Sbjct: 455  SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAAKRAL 512

Query: 1825 AVLK 1828
              LK
Sbjct: 513  RSLK 516



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 247  IPPRCMFDHP------DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHAS 294

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 295  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 354

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 355  YDYHKYFKA 363


>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
          Length = 1402

 Score =  174 bits (440), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 161/295 (54%), Gaps = 16/295 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQ---NKKMLAVFLVPK 360
           R YQL++ E AK +NTIA L+TG+GKTLIA LLIR I   +L+ +   N   ++ FLV  
Sbjct: 18  REYQLELFEIAKTRNTIAVLDTGSGKTLIACLLIRHIIEKELESRAAGNHPRVSFFLVHN 77

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQA V+R      +G YCG+MG   W  + W      +QV+VMTA IL + L H+
Sbjct: 78  VTLVFQQAAVLRCNIDAKIGEYCGDMGVGDWRKETWNDILKGQQVIVMTADILYSCLTHA 137

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            IKM+ INLL  DE HHA K+H ++ ++ +FY    +  RP +FGMTASPV   G S  V
Sbjct: 138 FIKMKDINLLCFDEAHHAKKRHSFARIIQDFYLPEPENTRPKIFGMTASPVG--GRSDVV 195

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEV-- 538
             A+   +LE  L S + T  D   L+  +  P EVV  Y K         +L   E+  
Sbjct: 196 QAAV---DLEKLLHSRIATTSDLALLQGSISRPEEVVTAYPKLRPQIFAFAELASSELGP 252

Query: 539 ----AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV-SERTESDGAANLIQK 588
                + + A S ++  K++ M  R   A+ E+  +  +  E +    AA+++ K
Sbjct: 253 WCADVMWKFALSETQARKFERMTERRLDAQAEIESIARIEKELSYLQEAADIVCK 307



 Score =  146 bits (368), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 177/343 (51%), Gaps = 29/343 (8%)

Query: 671 EIEEGELLDSHVVSGGEHVDVI----IGAAVADGK-VTPKV---QSLIKILLKYQHTEDF 722
           EIE    ++  +    E  D++    I    AD   ++PKV    + +K +   Q T+  
Sbjct: 284 EIESIARIEKELSYLQEAADIVCKYNIPPPSADSSHLSPKVLLLHAYLKEIYSVQTTD-- 341

Query: 723 RAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM--RTFQMQE---TIAKFR 777
           + IIFV R   A VL ++F  L  + +++   L+G      +    F ++E   T++KFR
Sbjct: 342 KCIIFVSRRYTATVLGELFKWL-KIKYLQIGVLLGSLTGSRVPGTNFTLREQMITVSKFR 400

Query: 778 DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
            G++  L+ATSVAEEGLDI  C++VIRFDL +T++ Y+QSRGRAR   S YI M+E GN 
Sbjct: 401 QGKLNCLIATSVAEEGLDIPDCSLVIRFDLYRTMIQYVQSRGRARSSVSKYIHMLESGNR 460

Query: 838 SHATFLRNARNSEETL----RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE-STGAVV 892
           SH   L + RNSE+ +    R    +R   S   D S ++     P   Y +E  TGA +
Sbjct: 461 SHLEMLSDVRNSEKIMRDFCRSLPADRILDSTSPDESSVLENTEGP---YHIEPGTGAKL 517

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           ++NS++ ++  Y   LP +   +L+P F + R  +      +  ++ LP  +P + +EG 
Sbjct: 518 TMNSSMLILFHYTQLLPQEDNELLQPLFTVRRVSE-----GFISEVTLPTLSPVQHIEGA 572

Query: 953 VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKV 995
              + R A+Q+     C +L   G   + L+P     ++  K+
Sbjct: 573 PMPTKRAAKQSASFFTCLELRRKGELDENLMPKSSRTKRNPKM 615



 Score =  143 bits (361), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 235/549 (42%), Gaps = 86/549 (15%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA--- 1393
            + P    I  +P  ++  A   PS + R++S L A ++   +   +     LEA+T    
Sbjct: 881  ITPSAFSISAIPSQVIHMAMIFPSFITRIDSYLHAWEVCSLLGMEIDVGVALEAITKDSE 940

Query: 1394 -----ASCQETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
                  S Q +        YER E LGD +LK   S  L+  Y    E +L   R  ++ 
Sbjct: 941  NTHEHGSAQVSLQRGMGSNYERLEFLGDCFLKLATSLSLYTAYHADDECELHVKRMVLIC 1000

Query: 1443 NLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            N  L+  A    +  YIQ   F+   W  P +  +  + T   +SS              
Sbjct: 1001 NRYLFTKAKEMKIPEYIQTAGFSRRTWY-PKMKLLMGKGTTQHNSS-------------- 1045

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
                                +  S+R L+ K+++DV EALIG   ++ G D A  ++  I
Sbjct: 1046 -------------------KEEISHR-LADKSISDVCEALIGAALIDKGLDGATQIVTAI 1085

Query: 1563 GIQVESDPEEV-----GCPSRPAC-----VPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
             ++     ++V      C ++PA       P  +  + D   +E+ +  KFK   LL+ A
Sbjct: 1086 -LRTPEHSQKVWADYYNCYTKPAYQLQEPSPSHIRVAED---IEELVGYKFKHPRLLISA 1141

Query: 1613 ITHASRPSSG--VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +TH S P +   V  YQRLEF+GDAVLD +  +++F  Y +  P  LT+ + A V+N+  
Sbjct: 1142 LTHPSLPFTWDRVPSYQRLEFLGDAVLDLVCVRYMFQKYPHADPQWLTEHKMAMVSNKFL 1201

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFNSFGLGDCKAPKVLGDIVE 1729
              VAV+   H  LR   S LD  IR++  ++ +      G   F       PK L D++E
Sbjct: 1202 GMVAVEMGFHRKLRRMGSVLDHAIREYEVDIQDAKANSNGAVDFWTSLKAPPKALPDVLE 1261

Query: 1730 SIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--------PMHPVRELQERCQQQAEG 1781
            +  GA+F+DSG   ++V ++    + P     T+        P   + +  +    +  G
Sbjct: 1262 AFIGAVFVDSGFQYNIVERLVNTFILPYFVDMTVFDNFAGQHPTTYITKFMDDLNCEFWG 1321

Query: 1782 LEYKASRSGNLATV--------EVYIDGVQVGV-AQNPQKKMA--QKLAARNALAVLKEK 1830
             E +   +GN+  +        E++  G  V V A   +  +A  QKL     L +LKE 
Sbjct: 1322 FESQQCMTGNMTYILTAIVVHREIFSYGSGVSVKAARVEASLAAIQKLEDPEGLRLLKEI 1381

Query: 1831 -ETAEAKEK 1838
               AE +EK
Sbjct: 1382 CNCAEVREK 1390


>gi|357462157|ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
 gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
          Length = 783

 Score =  174 bits (440), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 169/322 (52%), Gaps = 38/322 (11%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
             H +E  L+ +FK+  LL EA TH +  +     Y+RLE++GD+VL+ +IT   F +Y  
Sbjct: 444  LHEVEAILEYEFKNILLLEEAFTHCTYGAENGLSYERLEYIGDSVLNLMITTEQFHAYPT 503

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
            L PG LT LRAA V+ E  ARVA+K+ LH ++RH    L  +I+ F+KEV+E  L    +
Sbjct: 504  LAPGHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQAFIKEVVEYPL----H 559

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
            S GL D   PK+L DIVES  GAIF+D G     VW+ F+ LL P++ P T+  HP  EL
Sbjct: 560  SNGLID--VPKILADIVESTIGAIFVDCGSSIETVWKFFKKLLVPVIDPHTIQRHPSAEL 617

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQ-NPQKKMAQKLAARNALAVLKEK 1830
             E CQ++   L+++     +   VEV I    VG  +   +K++A   AA+NAL  +   
Sbjct: 618  NEFCQKRGLKLQFRDLWKVS-EIVEVLISEELVGSGKCGSKKEIAHNRAAKNALEYM--- 673

Query: 1831 ETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAV 1890
                          KRK G  T TR    +     ++  P  RC   GGPA  +  ++  
Sbjct: 674  --------------KRKFGISTSTRDDATE-----DFDSP-PRC--NGGPAAIEDLSFPS 711

Query: 1891 RVN-----TTDKGWTDECVGEP 1907
            + N     T D G   +C G P
Sbjct: 712  KYNGGSDATEDLGSPSKCNGGP 733


>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
          Length = 2043

 Score =  173 bits (439), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 190/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------ESDP 1570
              Y ++S      K++AD VEALIG Y +E G   A   M W+G++V          +  
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRHLDGGNQE 1890

Query: 1571 EEVGCPSRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
            + +   ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD+LIT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   + E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTKSER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.4 bits (163), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+++    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLKIQNASQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.3 bits (155), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEIGRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557


>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
          Length = 2043

 Score =  173 bits (438), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 191/393 (48%), Gaps = 76/393 (19%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D + +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L++ Y   HEG+L+
Sbjct: 1657 DLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLS 1716

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--------------GVLPVFD 1479
             +R + V+NL LY+    K L  Y+ A +F P   W  P                +P   
Sbjct: 1717 HLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHH 1776

Query: 1480 E------DTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSS------- 1526
                   D K+  S    +      D LG ++N         ++G+L+  + S       
Sbjct: 1777 WKLADLLDIKNLSSVQICEMVREKADALGLEQN------GGAQNGQLDDSNDSCNDFSCF 1830

Query: 1527 --YRVLSS-----KTLADVVEALIGVYYVEGGKDAANHLMKWIGI-------QVESDPEE 1572
              Y ++S      K++AD VEALIG Y +E G   A   M W+G+       Q++   +E
Sbjct: 1831 IPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQE 1890

Query: 1573 VGCP--SRPAC-----------VPESVL--------RSVD-----FHALEDALKIKFKDR 1606
               P  ++P              P S L          +D     F   E++L  KF+DR
Sbjct: 1891 QRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 1950

Query: 1607 GLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
              L++A+THAS  P+    CYQRLEF+GDAVLD++IT+HL+       PG LTDLR+A V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYIITRHLYEDPRQHSPGALTDLRSALV 2010

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFV 1698
            NN  FA +AV+H  H   RH S  L+  I  FV
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFV 2043



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 19/148 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TGA V L SA+ L++ YC++LPSD ++ L   +   R+E+  G T +   L+LP N+P +
Sbjct: 759  TGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLK 817

Query: 948  K-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSG---------------EQ 991
              + G    +  LA++   L AC +LH +G   D L P    G               E 
Sbjct: 818  HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPED 877

Query: 992  QEKVDQNDEGEPLPGTARHREFYPEGVA 1019
            ++ V  +D  EP PGT + R++Y + +A
Sbjct: 878  EQIVQLSD--EPRPGTTKRRQYYYKRIA 903



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++  S FP          Y ++  YY  KYG+ +    QPL+     S   
Sbjct: 1092 FYVAEICPHLSPLSCFPGDN-------YRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARL 1144

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC +HP P SL R A  LP
Sbjct: 1145 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTVHPFPASLWRTAVCLP 1202

Query: 1360 SIMRRVESMLLAIQLKDKIN 1379
             I+ R+  +LLA  ++ +++
Sbjct: 1203 CILYRINGLLLADDIRKQVS 1222



 Score = 64.7 bits (156), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 11/120 (9%)

Query: 724 AIIFVERVVAALVLPKVFAEL----PSLSFVKS-------ASLIGHNNSQEMRTFQMQET 772
           A+I+  +   A VL ++ AE+    P L F++        A         E+   + +E 
Sbjct: 438 ALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEV 497

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + +FR     +L+ TSV EEG+D+ +CN+V+R+D   T  +Y+Q +GRAR   + +++++
Sbjct: 498 LKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILV 557



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRS-VDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
            ++++ D  E+  P+    +  ++L +   F    D +        ++++A+T  S  + G
Sbjct: 1623 LKLQYDRMEIQPPTPTKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALT-MSNANDG 1681

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
            ++  +RLE +GD+ L + IT +L+ +Y N+  G+L+ LR+  V N N  R+  + +L
Sbjct: 1682 IN-LERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRL 1737


>gi|443922458|gb|ELU41905.1| dicer-like protein 1 [Rhizoctonia solani AG-1 IA]
          Length = 1426

 Score =  173 bits (438), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 168/637 (26%), Positives = 279/637 (43%), Gaps = 113/637 (17%)

Query: 1278 SYADYYK-QKYGVELIFK-KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYV 1335
            S  DYY+  ++  E I   +QPLI    +    N L+P+           E  + KT   
Sbjct: 804  SLLDYYRTHRHEFEGIQNLQQPLIEATLLPGLANQLNPQ-----------EPTVQKTTN- 851

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAI---------QLKDKINYPVPASK 1386
            +L PE+C++  +P    R A  LPS++  +E++L+A          Q++D++        
Sbjct: 852  YLVPEICYVSSIPAPTFRTASLLPSVIWHIENVLIAKEVNLTFFQGQIQDEL-------- 903

Query: 1387 ILEALTAASCQETFCYERAELLG------------------DAYLKWVVSRFLFLKYPQK 1428
            +  AL +     TF YER E LG                  D ++K+  S +L+   P  
Sbjct: 904  VAHALCSRMAHRTFSYERLEFLGRHHIVPHMFDSMRLIYAGDTFIKYAASAYLYGVEPTA 963

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
              G L   RQ+MV+N  L+  A + GL   IQ+D F P +W  P VL +  +    G++ 
Sbjct: 964  PSGVLHSKRQKMVNNRSLWLGAQALGLPPCIQSDVFRPKQWVIPNVL-ISKKSPIHGENP 1022

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
             F       + +L   + Y+                   R +  KT+ADVVEA+IG   +
Sbjct: 1023 GF-----TGQAQLLNSRQYS-------------------RQIPPKTIADVVEAMIGAALL 1058

Query: 1549 EGGKDAANHLMKWIGIQVESDPEEVG----CPSRPACVPESVLRSVDFHALEDALKIKFK 1604
             GG++ A  + K +G       + +      P++   + ES  +      L   + +   
Sbjct: 1059 SGGEELAFSVAKTLGFDTLKTCDWLDVISYAPNKSMTMKESDHKGETLDGLIKIIGVSLD 1118

Query: 1605 DRGLLVEAIT------------------HASRPSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
            +  LL++A+                   HAS   S  S Y+RLEF+GDAVLD L+ +  F
Sbjct: 1119 NPELLLQAMVRIFLSIIKLEVQLRTVQQHASMARSSES-YERLEFLGDAVLDMLVVQSFF 1177

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV--LEE 1704
                   P  +T ++++ V+N   A + ++  LH +L H  ++L + I  F+ EV   ++
Sbjct: 1178 SDEEEWSPHSMTLIKSSMVSNRALAIICIESGLHQYLMHDINSLAQSIVTFIDEVQKCKQ 1237

Query: 1705 LLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSG----RDTSVVWQVFQPLLDPMVT 1759
            + +             APK LGD+VES+ GAI++ SG    R  +V  +V +P  D  + 
Sbjct: 1238 IARTDAQRLKYWSKLVAPKALGDVVESLLGAIYISSGFSITRVKTVYDRVLKPFYDRYID 1297

Query: 1760 PETLPMHPVRELQERCQQ---QAEGL---EYKASRSGNLATVEVYIDGVQVGVAQNPQKK 1813
             + +  HP+  L +R +    ++ G+   E +    G     EV I G  +  A + + +
Sbjct: 1298 KKAMLTHPMSRLMKRLESIGCRSFGVAKAETQLPNGGTGFKCEVKIHGQIIAQAASEKAQ 1357

Query: 1814 MAQKLAARNALAVL---KEKETAEAKEKGDENGKKRK 1847
             A K A   AL +L    ++  A    +    GKKRK
Sbjct: 1358 QAIKDATERALNLLDAQPDRVLANCTCRAGPQGKKRK 1394


>gi|384494893|gb|EIE85384.1| hypothetical protein RO3G_10094 [Rhizopus delemar RA 99-880]
          Length = 407

 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 212/432 (49%), Gaps = 51/432 (11%)

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTA 1393
            V+L PE   I P+  S+ + +Q +P I+ ++++ LL  QLK   N   +    +LEA T+
Sbjct: 11   VWLKPEEHRIFPISASVYQASQLIPDILLQIDAFLLIQQLKTVHNLQFIDDELMLEAFTS 70

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S      YER E LGDA LK++VS +L+ KYP   E +LT +RQ M SN      A   
Sbjct: 71   PSANRKQDYERLEFLGDAVLKFIVSSYLYAKYPTYSEAELTSLRQVMTSNKSFANIAKDL 130

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
             L  YI +       W  P    V D +                       K++      
Sbjct: 131  KLHRYIISQSTVRRFWRPPHFQNVLDSNKI---------------------KHW------ 163

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY----VEGGKDAANHLMKWIG-IQVES 1568
                        ++ ++S  TLAD++E+ +G  +    ++G   AA  L   +G I+V S
Sbjct: 164  -----------LTHHLVSDNTLADIIESTVGAAFLSQSIDGAIYAATQLKLPLGSIKVWS 212

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            D   +  PS PA     +  ++D   + + L  +FK+  L+ EA+TH S   S V CY+R
Sbjct: 213  DLRHIWTPS-PASATGQI--NIDVVRVGEMLGYQFKNYLLVQEALTHGSVMDSLVPCYER 269

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GDA+LD  +T++++  +    PG L +LR ++VN+   + V +   L  H+ H S+
Sbjct: 270  LEFLGDAILDFFVTQYIYQKHPTAAPGILHNLRKSSVNHHILSAVCLNMGLDKHIIHVSA 329

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNS--FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
             +   I    + + +++   G ++  + L     PKVL D++ES+ GAI +DSG D + V
Sbjct: 330  EIAASILK-AEAIHKDMQSKGKDTDEYWL-HLNPPKVLSDVIESLMGAILVDSGFDINQV 387

Query: 1747 WQVFQPLLDPMV 1758
             + F+    P++
Sbjct: 388  EEFFERWFKPIL 399


>gi|402217569|gb|EJT97649.1| ribonuclease III [Dacryopinax sp. DJM-731 SS1]
          Length = 1400

 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 153/538 (28%), Positives = 240/538 (44%), Gaps = 86/538 (15%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLL-----AIQLKDKINYPVPASKILEA 1390
            +L PELC  + L  S  R +  LPS+M RVE MLL     ++   D+++       +L A
Sbjct: 807  YLMPELCVKYCLSLSSYRTSMILPSVMARVEEMLLVQECNSVVFHDRLD----EVFLLPA 862

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            LT+ S    + Y+R ELLGD++LK++ S FLF+  PQ  EG L   RQ+++SN  L  ++
Sbjct: 863  LTSPSAGAGYDYQRLELLGDSFLKYISSIFLFVTCPQDGEGSLHIHRQRIISNSALQFHS 922

Query: 1451 LSKG-LQSYIQADRFAPSRWAAPGVL---PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
               G L  YIQ+ + +P +W  P  L   P         +  +   E+ +     G    
Sbjct: 923  DRVGQLPQYIQSRQHSPRQWCPPNFLLYHPCMASALDTSEKFIQGMEERIEASNDGPTAG 982

Query: 1507 YNEYE-------DDDMEDGELEGDSSS--------------------YRVLSSKTLADVV 1539
             +  E       +    + E   D+S+                    ++ L  K++ADV 
Sbjct: 983  GSPPESGVTKALESHQANAETSPDNSTVSRSPMPYSARERALMREEQHQELGDKSVADVA 1042

Query: 1540 EALIGVYYVEGGKDAANHLMKWIGIQVE----------------SDPEEVGCPSRPACVP 1583
            EA++G  ++ G ++ A ++   +G+ +                  +  ++G  S+P    
Sbjct: 1043 EAVLGAAWLTGQREMALYVCHILGLPMTRMGSWDFLRDHAHIFFHEELDIGPLSQP---- 1098

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
                      A+E  L  KFK+  L   A+TH+S  S+   CY+RLEF+GDA+LD +  +
Sbjct: 1099 -------KVEAVEAILGHKFKNPFLAATALTHSSMSSTDFPCYERLEFIGDAILDFVTVR 1151

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             L+  +  L  G LT L+ A V+N   A   V   LH ++ H S  L   +  + KE+ +
Sbjct: 1152 LLYMRWGELHEGWLTMLKGAIVSNAALAAFCVDLGLHHYIIHDSPHLVETVSSYAKEITK 1211

Query: 1704 -----------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS----VVWQ 1748
                       E   PG     L   + PKVL DIVE++ GAI++    D S    V  +
Sbjct: 1212 AKEEDLAAAAAEDRAPGEYWVTL---EPPKVLSDIVEALLGAIYVSDSFDPSGYENVFDR 1268

Query: 1749 VFQPLLDPMVTPETLPMHPVRELQERCQQQ-AEGLEYKASRSGNLATVEVYIDGVQVG 1805
            +F+P     V+  TL  HP   L    QQ+     E   +R+      EV  D V  G
Sbjct: 1269 LFKPFFMKRVSLNTLSQHPTSLLFALLQQRGCHRFELTKTRAETDLLTEVQCDFVLHG 1326



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 142/329 (43%), Gaps = 35/329 (10%)

Query: 665 VEGGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED- 721
           V    +E+EE   +L+D  +V   +   +++     D   +P++ +L+++L +    E  
Sbjct: 180 VPASFSEVEEMRSKLVD--MVRAHKFPSIVLDPQSTDCNASPRLLTLLQVLKQMMAKEKD 237

Query: 722 -FRAIIFVERVVAALVLP-------KVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETI 773
            FR IIFV R   A  L        +V   + +   + S++++   N+  +   Q     
Sbjct: 238 RFRGIIFVYRRTTAKALADLLNRNAQVLPNVRARPLIGSSAVLMDPNADHLTKTQ---AT 294

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            +FRDG + LLV T +  + L + +C++VI FD      A    +    K  S ++++IE
Sbjct: 295 TQFRDGTINLLVTTGIGVD-LSVERCSIVIVFDSFSAHAAGQLRQSHLLKITSIFLILIE 353

Query: 834 RGN------LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVES 887
           +G       LS     R+   SEE     A E     H + T  + S D    ++  V  
Sbjct: 354 KGKQKDIQALSAFLPRRSKEKSEEESTPPAAE-----HPRSTG-IDSEDEDQASIL-VPE 406

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           TGA VS   A+ ++  Y S       S+     +M  + +      + C ++ P +A  E
Sbjct: 407 TGARVSALDALQVLTRYVSIKEKSAVSLNVDYHVMGENNR-----IFRCTIRFPPSAELE 461

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
            +    C S   A++     AC++L+  G
Sbjct: 462 DVTSESCPSKAAARRQAAYMACEELNARG 490


>gi|384500233|gb|EIE90724.1| hypothetical protein RO3G_15435 [Rhizopus delemar RA 99-880]
          Length = 272

 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 6/176 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK-----KMLAVFLVP 359
           R YQ D+ ++A K+N I  L+TGAGKTLI+V+LI+ +   L+R+ +       LA FLV 
Sbjct: 91  REYQYDLFQKALKENIITVLDTGAGKTLISVMLIKHMTT-LEREARLTRRETKLAFFLVD 149

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           +VPLV+QQA VI+     V+   CGEM  D W  +RW+  F+   V VMTAQI L+ L H
Sbjct: 150 RVPLVFQQASVIKANCDIVLEAICGEMDVDNWSEKRWRLIFEESDVCVMTAQIFLDALYH 209

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG 475
             + ++  +L+I DECHH  KKHP++L+M EFY     EKRP +FGMTASP++ K 
Sbjct: 210 GFLSIDKAHLIIFDECHHTTKKHPFNLIMREFYDRCPIEKRPKIFGMTASPMHSKS 265


>gi|358348326|ref|XP_003638198.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
 gi|355504133|gb|AES85336.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
          Length = 472

 Score =  172 bits (437), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 161/283 (56%), Gaps = 11/283 (3%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  +   F+++ LL EA+TH+S P S    Y+RLEF+GDAVL H I+ HLF  YTN+ 
Sbjct: 116  AVEKIIGYTFRNKNLLEEALTHSSYPES--VSYERLEFIGDAVLGHAISNHLFLVYTNVD 173

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
              +L+ LR+A V+ E  AR AV + LH ++R  + +L   IR+F   V +E  +     +
Sbjct: 174  QRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAAAVEQEKGR-AIVLY 232

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPKVL D+VES+A A+++D   D   +W V + LL+P+VT   L     PV  L
Sbjct: 233  G-GAVKAPKVLADVVESVAAAVYVDLDFDLKKLWVVIRGLLEPIVTLNDLEQKPQPVTML 291

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             E C +  + ++ + SR+G+ +T  VY+DG    VA + QK +A+  AA++A+  L   E
Sbjct: 292  YEICHKNGKKVDIRHSRNGDKSTASVYVDGELFAVASSDQKDIAKLDAAKSAVQKL---E 348

Query: 1832 TAEAKEKGDENGKKRKNGTQTF--TRQTLNDICLRRNWPMPLY 1872
                      +  K  +GT      +Q L  +C R+ WP P+Y
Sbjct: 349  RVLPITTTTPDNCKGLDGTFEIEEPKQKLYALCGRKKWPTPVY 391



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EALT +S  E+  YER E +GDA L   +S  LFL Y    + QL+ +R   VS   L +
Sbjct: 133  EALTHSSYPESVSYERLEFIGDAVLGHAISNHLFLVYTNVDQRQLSLLRSANVSTEKLAR 192

Query: 1449 YALSKGLQSYIQ 1460
             A+S  L  YI+
Sbjct: 193  AAVSNCLHRYIR 204


>gi|340975794|gb|EGS22909.1| hypothetical protein CTHT_0013870 [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 1660

 Score =  172 bits (437), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 194/750 (25%), Positives = 319/750 (42%), Gaps = 148/750 (19%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++LE++ K+N I  ++TG+GKT +A+L I+    +L+R +K  +  FL P VPL 
Sbjct: 199 RAYQLEMLEESLKQNVIVAMDTGSGKTQVAILRIQ---YELERSDK--VVWFLAPTVPLC 253

Query: 365 YQQAEVIREQTGYVVGHY-CGEMGQDFWDAQR--WQREFDTKQVLVMTAQILLNILRHSI 421
           +QQ  VI+ Q   V     CG+   + W A    W       +V+V T QIL + + H++
Sbjct: 254 HQQHVVIQTQLPAVTTRLICGDDDIETWSAIPGVWDGVLKHTRVIVSTYQILFDAVAHAL 313

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQ 479
           + + A++L+++DE HH +K +P S VM E Y     +  + P+V G+TASPV     +  
Sbjct: 314 VPLSALSLIVIDEAHHCIKMNPVSRVMKEHYAPLKAKGAQVPAVLGLTASPVMRTNPAD- 372

Query: 480 VDCAIKICNLESKLDSVVCTI-KDRKELEKHVPMPSEVVVEY--------DKAASLWSLH 530
                 +  LE  L +V  T  + R EL + V  P  V V Y         +   L  L 
Sbjct: 373 ------LEKLEQTLFAVCKTPSRHRAELMQMVTKPDLVTVTYPGDPQGQVPEPPVLGRLI 426

Query: 531 EQLKQMEVA----VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
              + M++A    ++      S+RS+ +            +  +Y +  RT+     +++
Sbjct: 427 AAYRGMQLAQDPYIQHLVMDGSQRSRAKLQKVVSKRKTRSMEHMYALCIRTK-----DML 481

Query: 587 QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
           Q+          LG W A       ++A  +D                            
Sbjct: 482 QR----------LGPWAAEYYIHEVISAFFDDP--------------------------- 504

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG--KVTP 704
           E +    D + V+  N   E    +++E   + S +      V+    A    G   ++P
Sbjct: 505 EASTGPLDEEEVELYNPIFEYNL-QVQERRYISSIL----SQVNAQPPATTDQGPSPLSP 559

Query: 705 KVQSLIKILLKYQHTEDFR---AIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNN 760
           K+ +L+ +L  +   +  R    IIFV     A VL  + +  P +    + A ++G   
Sbjct: 560 KILALLDVLESFAKDDPSRKPVGIIFVRERATAAVLSHILSIHPRTAPHYRVACMVGGTT 619

Query: 761 ----------SQEMRTF---------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
                     S + R +            E +  FR G V L+VATSV EEG+D+  CN+
Sbjct: 620 RVPGSGGGSRSNKRREYIDLIKKGKDDGLEALQAFRQGEVNLVVATSVLEEGIDVPACNL 679

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT 861
           V+ FD+ + + ++IQ RGRAR   S  +LM+  G          A+  +E       ER 
Sbjct: 680 VVCFDVPENLKSFIQRRGRARMGVSKLVLMVPEGE--------QAKGWDER------ERE 725

Query: 862 DLSHLKDTSRLISV--DAVPGTVYQVES-----------TGAVVSLNSAVGLIHFYCSQL 908
                +D  R++ +  +   G V + E            TGA V+L+ A   +  +C  L
Sbjct: 726 MKEMYEDDMRVVRIVEEIENGIVVETEKEDEYPVLRDPETGAQVTLHDAKAHLEHFCGTL 785

Query: 909 PSDR--YSILRPEFIMERHEKPG------GPTEYSCKLQLPCNAPFE--KLEGPVCSSMR 958
            S    ++ LRP +I+  H + G       P      + LP   P E  ++EG       
Sbjct: 786 RSSTSAFTELRPFYIL--HGEHGQSVNTFAPVPLRATVHLPVVLPPELRRIEG---IRSW 840

Query: 959 LAQQAVC----LAACKKLHEMGAFTDMLLP 984
           L++   C      A +KL+E G     LLP
Sbjct: 841 LSEADACRDAAFQAYQKLYEAGLVGKHLLP 870



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 178/437 (40%), Gaps = 118/437 (27%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            ++ AL A+  Q    YE  E LGDA LK++ +     KY    EG L+ ++ ++VSN+  
Sbjct: 1148 VVRALWASGAQRPGDYENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKDRIVSNMRF 1207

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            ++ A+  GL  YI   +    RW  P +            SS+  +  SV          
Sbjct: 1208 FRAAVGFGLDRYIIDAKMVQKRWRPPTI------------SSILGRPPSV---------- 1245

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
                              ++ R LS+KT+ADVVEAL+G  Y+ GG D A   +      V
Sbjct: 1246 ------------------TAPRQLSTKTVADVVEALVGAAYLSGGTDRALTCVPLFLPDV 1287

Query: 1567 ESDPEEVG-C-------PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
              D   VG C        +    +P++ +R ++    E  L  +FK + LLVEA+TH+S 
Sbjct: 1288 PIDWLPVGRCRDILFNHAAADDPLPKT-MRRIE----EQLLGYEFKKKSLLVEALTHSSC 1342

Query: 1619 PS-SGV-SCYQRLEFVGDAVLDHLITKHLFFSYT--------NLPPGRLTDLRAAAVNNE 1668
            P+  GV     RLE +GDA+LD L+   L+  Y          + P  L  +++A VN +
Sbjct: 1343 PAGPGVRGSLDRLELLGDALLDFLVATKLYELYKCNVDGQQQMVVPYILHIMKSALVNQD 1402

Query: 1669 NFARVA----------------------------------------------VKHKLHVH 1682
              A +                                               V+  L   
Sbjct: 1403 IMAVLILEEWTILQEELDIIAPPSPSSSQGSETAISEGNGEHSGGVTLRTRHVRVPLTAF 1462

Query: 1683 LRHGSSALDRQIRDFVKEV------LEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGA 1734
            LRH +  L R + D  +        ++  L  G  +    +   +APKV  D+ E++  A
Sbjct: 1463 LRHNTIQLSRFMNDTTRRYAAMRHEVQHALTHGDRYPWRLISQLRAPKVFSDVFEAVLAA 1522

Query: 1735 IFLDSGRDTSVVWQVFQ 1751
            +++DSG D  V  +V +
Sbjct: 1523 VWVDSG-DMDVCRRVLE 1538



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 44/205 (21%)

Query: 1605 DRGLLVEAI--THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRA 1662
            D G +V A+  + A RP      Y+ +EF+GDA+L  L T +    Y   P G L+ ++ 
Sbjct: 1144 DLGNVVRALWASGAQRPGD----YENMEFLGDALLKFLTTVNCEAKYLTYPEGFLSPIKD 1199

Query: 1663 AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG---DCK 1719
              V+N  F R AV              LDR I D   +++++  +P   S  LG      
Sbjct: 1200 RIVSNMRFFRAAV-----------GFGLDRYIID--AKMVQKRWRPPTISSILGRPPSVT 1246

Query: 1720 AP-----KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--------- 1765
            AP     K + D+VE++ GA +L  G D ++      PL  P V  + LP+         
Sbjct: 1247 APRQLSTKTVADVVEALVGAAYLSGGTDRAL---TCVPLFLPDVPIDWLPVGRCRDILFN 1303

Query: 1766 -----HPVRELQERCQQQAEGLEYK 1785
                  P+ +   R ++Q  G E+K
Sbjct: 1304 HAAADDPLPKTMRRIEEQLLGYEFK 1328



 Score = 47.0 bits (110), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 16/94 (17%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE----TFCYERAELLGDAYL 1413
            LP  MRR+E  LL  + K K       S ++EALT +SC          +R ELLGDA L
Sbjct: 1311 LPKTMRRIEEQLLGYEFKKK-------SLLVEALTHSSCPAGPGVRGSLDRLELLGDALL 1363

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
             ++V+  L+  Y    +GQ     QQMV   +L+
Sbjct: 1364 DFLVATKLYELYKCNVDGQ-----QQMVVPYILH 1392


>gi|325091272|gb|EGC44582.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H88]
          Length = 1432

 Score =  172 bits (437), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 172/687 (25%), Positives = 284/687 (41%), Gaps = 147/687 (21%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK  N IA L+T                 D    N   ++ FLV  V LV
Sbjct: 94  REYQLELFEKAKAANIIAVLDTA----------------DRASGNPPRISFFLVDSVTLV 137

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           YQQA V++      +  + G M  D W  + W++ F    ++V TA++L   L  S I+M
Sbjct: 138 YQQAAVLKANIDQNIDKFSGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRM 197

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
           E INLLI DE HHA K+HPY+ ++ +FY      +KRP +FGMTASPV+ K     VD A
Sbjct: 198 EHINLLIFDEAHHAKKEHPYARIVKDFYLRRPETQKRPKIFGMTASPVDAK-----VDVA 252

Query: 484 IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
               NLE+ LDS + T  +   L + +  P+E +  YDK  + +         E  + + 
Sbjct: 253 KAAKNLETLLDSQIATASNLDALRQAIARPTEQIWVYDKLDATF---------ETDLYKC 303

Query: 544 AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
            QS               G   EL +++  +    S                   LG+WC
Sbjct: 304 MQSR-------------FGKIRELERIFFYALEASS------------------MLGRWC 332

Query: 604 AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKK--DAKVVDSE 661
                            +++      + + L K         +EG VSK    +   D  
Sbjct: 333 -----------------SDWLWTFALEAAELPK---------LEGRVSKSYMQSSSRDHS 366

Query: 662 NGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKYQHTE 720
            G  E      E G+L+ +H       VD           ++ KV+ L   L L ++   
Sbjct: 367 KGLDEAIKLLREAGQLIRNHTFDTP--VD-------CPAHLSSKVRLLRHELSLYFERHT 417

Query: 721 DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNSQEMRTFQMQE---TIAKF 776
           D + I+FV++   A +L ++F+ + +   +++  LIG  ++      F  ++   T+ KF
Sbjct: 418 DTKCIVFVQQRHTARLLAELFSRIGT-RHMQTGILIGVQHDGIGGANFSFRQQFLTLLKF 476

Query: 777 RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
           R G +  LV                                  R       Y  M+ER N
Sbjct: 477 RKGELNCLV----------------------------------RPELDHDSYAHMVERDN 502

Query: 837 LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ---VESTGAVVS 893
           L HA+ ++ A+ +E  +R+      +   ++ +S  + ++      Y+   V STGA ++
Sbjct: 503 LIHASCIQEAQRAEHIMRRFCESLPEDRIIRGSSDDLGMNLDKERYYKSFTVHSTGATLT 562

Query: 894 LNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV 953
             S++ ++  Y S L  ++ +  +  + +ER +       + C+  LP  +PF  L G  
Sbjct: 563 YPSSLVVLAHYASSLQYEKETSPQVNYFIERIDGA-----FVCEAILPEKSPFRGLTGKP 617

Query: 954 CSSMRLAQQAVCLAACKKLHEMGAFTD 980
            +    A+Q+     C  L + G   D
Sbjct: 618 SARKLHARQSAAFETCLMLRKNGILDD 644



 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 216/488 (44%), Gaps = 77/488 (15%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP++R   V   +NLL    + + EQE  GEE     YY+   PE   I  LP  +   
Sbjct: 896  KQPVVRAELVRLRRNLL----DRATEQE-RGEET---AYYIC--PEPLRISALPPPVAAF 945

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  DK+   +     LEALT  S         Q  F      
Sbjct: 946  AFAFPAIISRIESYLISLEACDKLQLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGK 1005

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +++
Sbjct: 1006 NYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVR 1065

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                         KL   K  +E           
Sbjct: 1066 TQGFSRRNWYPEGI-------------------------KLLQGKAKSE----------- 1089

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA-NHLMKWIGIQVESDPEEVGCPSRP 1579
               + + + L  KT+AD+ EALIG   + GGK    +  +K + + V+SD   V   +  
Sbjct: 1090 --SAQNKQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSY 1147

Query: 1580 A---CVPESVLRSVDFHALEDALKI------KFKDRGLLVEAITHASRPS--SGVSCYQR 1628
                 +P   +   D   L+ A +I       F    LL  A THAS PS  S V CYQR
Sbjct: 1148 IDLYSLPSYQIVQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQR 1207

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +  ++L+  Y +  P  LT+ + A V+N+    V VK  LH HL + S+
Sbjct: 1208 LEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISN 1267

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKA--PKVLGDIVESIAGAIFLDSGRDTSVV 1746
            AL  QI  + +E+ E  +    +S       +  PK L D++E+  GAIF+DS     VV
Sbjct: 1268 ALFGQITRYAEEI-EVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVV 1326

Query: 1747 WQVFQPLL 1754
               FQ  L
Sbjct: 1327 EDFFQRYL 1334


>gi|449532911|ref|XP_004173421.1| PREDICTED: endoribonuclease Dicer homolog 2-like, partial [Cucumis
            sativus]
          Length = 307

 Score =  172 bits (436), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 161/320 (50%), Gaps = 48/320 (15%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +LEA+T   CQE F  E  E LGD++LK+   + LF  +   HEG LT  + ++VSN  L
Sbjct: 1    VLEAITTKKCQEKFNLESLETLGDSFLKYATGQHLFRTFQNDHEGLLTLKKDRIVSNAAL 60

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD----GDSSLFDQEKSVAEDKLG 1502
             +      +  +I+ + F P  W  PG       DT +     +  LF   K   + K  
Sbjct: 61   RRRGCEHKISGFIRDEAFDPQNWDIPG-------DTHEVYQLREEVLFSGRKVYVQRK-- 111

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
                                     R + SK +ADVVEALIG Y   GG+ AA   +  I
Sbjct: 112  -------------------------RKIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRI 146

Query: 1563 GIQVESD--PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS 1620
            GI+V  D  P E     RP  V   V + ++   LE  LK  F DR LL+EA+TH S   
Sbjct: 147  GIEVNFDFVPYE-----RPFRV--DVHKLINVGHLESLLKYTFNDRSLLLEAMTHGSYML 199

Query: 1621 SGV-SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
              +  CYQRLEF+GD+VLD+ IT HL+  Y  + P  LTD+R+A+V+N+ ++R A+K +L
Sbjct: 200  PEIPRCYQRLEFLGDSVLDYAITVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQL 259

Query: 1680 HVHLRHGSSALDRQIRDFVK 1699
            H  + H S  L + I   V+
Sbjct: 260  HKSILHCSHDLHKHISSAVQ 279



 Score = 42.7 bits (99), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 1385 SKILEALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +LEA+T  S    +   CY+R E LGD+ L + ++  L+ KYP      LT MR   V
Sbjct: 186  SLLLEAMTHGSYMLPEIPRCYQRLEFLGDSVLDYAITVHLYNKYPGMTPELLTDMRSASV 245

Query: 1442 SNLVLYQYALSKGLQSYI 1459
            SN    + AL   L   I
Sbjct: 246  SNDCYSRTALKAQLHKSI 263


>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
          Length = 1785

 Score =  172 bits (436), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 226/487 (46%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 1305 FLEYDQEH--------IKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMP 1356

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 1357 -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 1414

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSR---- 1578
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V      +D E+  CP R    
Sbjct: 1415 QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKGLCPPRENFS 1474

Query: 1579 ----------------------------------PACV-----PESVLRSV--DFHALED 1597
                                              P C+      +  L  +   F   E 
Sbjct: 1475 SQQKNLSGGWAAASAASSRSSVCKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 1534

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 1535 KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 1594

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 1595 LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 1654

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 1655 SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 1714

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 1715 SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 1772

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 1773 RSLKANQ 1779



 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 230/480 (47%), Gaps = 38/480 (7%)

Query: 575  ERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQ----NDERANYQLDVKFQ 630
            ER  +  +  ++   RA+   L  LG WCA KVA   +  LQ    +++   ++  + F 
Sbjct: 156  ERDSTLISKQILSDCRAV---LVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFT 212

Query: 631  ESYLSKVVSLLQCELVEGAVSKK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEH 688
            +++L K+ +L +      ++  K    KV+       +    E ++ E ++ +     ++
Sbjct: 213  DTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDN 272

Query: 689  VDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAEL---- 744
                  +   D     + +   +       T     IIFVER   A+VL ++  E     
Sbjct: 273  YVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQD 332

Query: 745  PSLSFVKSASLIGH--------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDI 796
            P L+++ S  + GH        N   E    + +E + KFR     LL+ATS+ EEG+DI
Sbjct: 333  PELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDI 392

Query: 797  RQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRK 855
             +CN+V+RFDL     +Y+QS+GRAR P S+YI++ +   + S    L+  +  E+ LR 
Sbjct: 393  PKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRN 452

Query: 856  EAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI 915
            +  +  D         +   D  P  V + E  G  V++N+A+G I+ YC++LPSD ++ 
Sbjct: 453  KCSKSVDTGETDIEPVVDDDDVFPPYVLRPEDGGPRVTVNTAIGHINRYCARLPSDPFTH 512

Query: 916  LRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHE 974
            L P+      E P G T YS  L LP N+P    + GP  S +RLA++ V L  C+KLH+
Sbjct: 513  LAPK--CRTRELPDG-TFYS-TLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHK 568

Query: 975  MGAFTDMLLPDKGSGEQQEKVDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +G   D L+P    G++  K ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 569  IGELDDHLMP---VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSY 625



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 808  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 860

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 861  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 917

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 918  LPSILYRLHCLLTAEELR 935



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 1162 ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 1221

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGD 1486
            Y+    KGL S +    F  P  W  PG   V ++D  + D
Sbjct: 1222 YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSNTD 1260



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 1160 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 1217

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 1218 NCNLYRLGKKKGL 1230



 Score = 48.5 bits (114), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q  
Sbjct: 1532 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 1591

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 1592 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 1623


>gi|238499727|ref|XP_002381098.1| Dicer-like protein [Aspergillus flavus NRRL3357]
 gi|220692851|gb|EED49197.1| Dicer-like protein [Aspergillus flavus NRRL3357]
          Length = 694

 Score =  172 bits (436), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/222 (43%), Positives = 128/222 (57%), Gaps = 9/222 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKK--MLAVFLVPK 360
           R YQ+++ E+AK +NTIA L+TG+GKTLIAVLL++ I  +  + R N K   ++ FLV  
Sbjct: 105 REYQVELFERAKSQNTIAVLDTGSGKTLIAVLLLKHIIQNELIDRANGKPPRISFFLVDS 164

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L +QQA V+R      V  + G MG D W  Q W  +F+   V+V TA+IL   L +S
Sbjct: 165 VTLAFQQAAVLRNNLDQNVVQFFGAMGTDLWSKQTWDHQFENNMVIVCTAEILNQCLLNS 224

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I+M+ INLLI DE HH  K HPY+ ++ E Y      KRP +FGMTASP++ KG     
Sbjct: 225 YIRMDQINLLIFDEAHHTKKDHPYARIIRESYLKADPTKRPRIFGMTASPIDTKG----- 279

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
           D       LE  LDS + T      L + V  P E   EYDK
Sbjct: 280 DIIESATKLEVLLDSKIATTSKPNLLREVVRRPIEESWEYDK 321



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 19/241 (7%)

Query: 700 GKVTPKVQSLIKILLKY-QHTEDFRAIIFVERVVAALVLPKVFA--ELPSLSF-----VK 751
           G+++PKVQ L + L+KY +H  + + I+F ++   A +L  +F+  E+P L       V+
Sbjct: 424 GELSPKVQLLRQKLIKYFEHPTETKCIVFTQKRYTAKMLFDLFSTLEIPYLRPGVLIGVR 483

Query: 752 SASLIGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
           S  ++G N S     F+ Q   + KFR G +  L ATSVAEEGLDI  CN+VIRFDL  T
Sbjct: 484 SGDIVGMNVS-----FRQQFLALVKFRSGEINCLFATSVAEEGLDIPDCNLVIRFDLYNT 538

Query: 811 VLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKD 868
           ++ Y+QSRGRAR   S Y  MIER N  HA  L   R +E+ ++   E +    + H  D
Sbjct: 539 LIQYVQSRGRARHSSSTYASMIERYNADHAARLVEVREAEKLMQSFCETLPEDRILHGID 598

Query: 869 TSRLISV--DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
            S + S+  D      + + +TGA ++ +SA+ ++  Y S L   R S L  + +   H 
Sbjct: 599 -SEIDSILQDEEEKRTFIIRATGAKLTYHSALAILARYASSLSYYRKSRLFEDSLESLHR 657

Query: 927 K 927
           +
Sbjct: 658 R 658


>gi|146149942|gb|ABQ02405.1| dicer [Schistosoma mansoni]
          Length = 2641

 Score =  172 bits (435), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 198/403 (49%), Gaps = 65/403 (16%)

Query: 1360 SIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSR 1419
            +I R+++S   +  ++ +   P P + IL+ALT +   +    ER E +GD++LK+VV+ 
Sbjct: 1921 NISRQLDSEKPSNNIRKRAYQPGPTT-ILQALTMSCSNDFINLERMETIGDSFLKFVVTV 1979

Query: 1420 FLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGV---- 1474
             L+L YP+ HEG+L+ +R ++V N  LY+   +K LQ+ +   +F P   W  PG     
Sbjct: 1980 HLYLTYPEAHEGKLSHLRSRIVCNSNLYRLGKAKDLQNRMIGCKFEPHENWIPPGYYVRQ 2039

Query: 1475 -----------------LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY--NEYEDDDM 1515
                             L ++  DT   D  L + +  + E+K+   +N+  +E++ +D 
Sbjct: 2040 DKRLNNEIIKKFESNRNLVIWSTDTLMDDEVLRNID-FIDENKIKPIENFPISEWDPNDP 2098

Query: 1516 EDGELEGDSSSYRV-----LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
            +    +  ++ Y +     +  K++AD VEALIG Y    G+ +A  LM+W GI      
Sbjct: 2099 KVLHAQHLNNQYLITIQQAIPDKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKS 2158

Query: 1571 EEVGCPSR-PACVPESVLRSVD--------------FHALEDALKIKFKDRGLLVEAITH 1615
            +     +R P  +P+S     D              F  LE +L   FKD  LL++A TH
Sbjct: 2159 DNSQPTARAPWSLPKSNYLDTDENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTH 2218

Query: 1616 ASRP-------------------SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             S                     S+ + CYQRLEF+GDAVLD++IT+ L+       PG 
Sbjct: 2219 PSYHQLRVLSTSNNLSDQSNLMFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGV 2278

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            LTDLR+A VNN  FA +AV+  LH + R  S  L   I  FV+
Sbjct: 2279 LTDLRSALVNNNIFAALAVRIGLHKYFRASSPQLLHTIDVFVR 2321



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 15/134 (11%)

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQER 1774
            D + PK L DI ES+AGAIFLDS      VWQ+F P++   +   T  +P  PVR+L E 
Sbjct: 2508 DVEIPKALSDIFESLAGAIFLDSNFSLDTVWQIFYPIMKERIERYTACIPKSPVRQLLEL 2567

Query: 1775 CQQQAEGLEYKASR---SGNLAT-VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE- 1829
               + EG +++ +R    G ++    V   G   GV +N   ++A+ LAA+ AL VL+  
Sbjct: 2568 ---EPEGTKFERARRMVDGRISVCAHVLGKGRFYGVGRN--YRLAKSLAAKRALRVLRRL 2622

Query: 1830 ---KETAEAKEKGD 1840
                +T      GD
Sbjct: 2623 NQPSQTTPVTTNGD 2636



 Score = 55.5 bits (132), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 70/277 (25%)

Query: 770  QETIAKFRDGRVTLLVAT-----SVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR-- 822
            +ETI  FR G + LLVAT     +V   G ++ +CN+VI   L  ++  Y+ S+ R+R  
Sbjct: 766  EETITNFRRGAINLLVATQAAISTVTTSGTELPRCNLVIALRLPNSLAEYLSSKARSRLV 825

Query: 823  KPGSDYILMIERGNL-----------SHATFLRNARN-SEETLRKEAIERTDLSHLKD-- 868
              G+  I +++  ++           +  + L + +N S++T     ++    +H+ D  
Sbjct: 826  NYGAKVIYLMDHDSIEKINNNNNNNVNKQSNLNDKQNRSKQTDDHSTVDSMYSNHINDQF 885

Query: 869  -----------TSRL--------------ISVDAVPGTVYQVESTGAVVSLNSAVGLIHF 903
                         R                 VD +   ++     G    L+ A+ +I+ 
Sbjct: 886  LGNFQQLEQLLLQRCRGYNVFADEHAIDPTVVDKILPPIFPRGPCGPKFCLSKAINIINQ 945

Query: 904  YCSQLPSDRYSILRPEFIMERHEKPGGPTE-----------------------YSCKLQL 940
            YC++LPSD  + L P++  +   +P G T                        Y C L+L
Sbjct: 946  YCARLPSDYITNLTPKWYWKIFPQPQGFTPSSTGPGSTCGSLKDLQPDGTFNLYQCVLRL 1005

Query: 941  PCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
            P N+   E + G      +LA+ +    A   L+  G
Sbjct: 1006 PINSSVKETIVGEPMVCKKLAKYSAAFNAIHLLYLSG 1042



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 37/146 (25%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            +YV  IR +M+  S FP  +       + ++A YY  KY   +    QPL+         
Sbjct: 1413 YYVAIIRNDMSPLSPFPSDK-------FRNFAAYYINKYNALITTNNQPLLDVDLTVLRL 1465

Query: 1309 NLLSPRF------------------------------EHSEEQEGEGEEILDKTYYVFLP 1338
            NLL PR+                              ++ ++Q  +  +  D T    L 
Sbjct: 1466 NLLIPRYMNIYGHNNTNANDNNGDINNSKSNNVYTHKQYYQQQNHDDHQGEDLTNKQLLV 1525

Query: 1339 PELCFIHPLPGSLVRGAQRLPSIMRR 1364
            PELCF H  P S+ R A  +PSI+ R
Sbjct: 1526 PELCFRHSFPASVWRKAVCIPSILYR 1551


>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
          Length = 1588

 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/314 (35%), Positives = 162/314 (51%), Gaps = 30/314 (9%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI----CNDLQRQNKKMLAVFL 357
           +  R YQ+++ E+AKKKNTI  L TG+GKTLIA LL+R I      D      K +A FL
Sbjct: 167 QTPREYQIELFEKAKKKNTIVVLNTGSGKTLIAGLLLRHILEKEIEDRAAGKLKRIAFFL 226

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           V KV LV+QQ  V+     + VG +CG+M  + W  + W ++F+   V+V TA IL   L
Sbjct: 227 VDKVSLVFQQHAVLDCNLEHPVGRFCGDMVDEMWSREFWAQQFEENMVIVCTAAILQKCL 286

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGV 476
            HS I+M  INLL+ DE HH  K HPY+ ++ +FY    +KE RP + GMTASPV+    
Sbjct: 287 THSYIRMNQINLLVFDEAHHTKKNHPYARIIKDFYIKVPAKEMRPRILGMTASPVD---- 342

Query: 477 SSQVDCAIKICNLESKLDSVVCTI-----------KDRKELEKH---VPMPSEVVVEYDK 522
            +Q D  I    LE  L S + T+           ++  E+E H   +P+P E  + Y K
Sbjct: 343 -AQTDVKIATAQLECLLHSEIATVSEESLYSNSTARNITEIEVHYSSLPVPYETKL-YQK 400

Query: 523 AASLWSLHEQLKQMEVAVEEAAQSS----SRRSKWQFMGARDAGAKEELRQVYGVSERTE 578
            ++L   +    + E++  +AA SS    +    WQ     +   +   R     S    
Sbjct: 401 VSALVGCNPHFSK-ELSFAKAATSSLGPWAADRFWQLFLTDETILRLAQRTDMTYSGLKS 459

Query: 579 SDGAANLIQKLRAI 592
           +D     +QKLR +
Sbjct: 460 NDKETAAVQKLRDV 473



 Score =  142 bits (357), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 161/615 (26%), Positives = 246/615 (40%), Gaps = 114/615 (18%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQK----YGVELIFK 1294
            ++  +   ++FY+  +R +M      P  EG   P  + ++ D   +K    Y V L  K
Sbjct: 957  VIDPSAGSRKFYLRGVRKDMKPMDPVP--EGVPDP-GHRAWRDPALEKNIKEYSVSLWAK 1013

Query: 1295 K---------QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIH 1345
                      QP++    VS  +NLL    +   E   EG +I     Y+ L P    + 
Sbjct: 1014 SRTKRTWRDTQPVVEAEVVSLRRNLL----DDFVEVAAEGSKIC----YLILEP--MRVS 1063

Query: 1346 PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE------- 1398
             LP   V  A   P+++ R++S+++A+     +   +     LEA+T  S          
Sbjct: 1064 TLPIDTVVMAFAFPALIHRIDSVMIALDACKLLELNIRPDLALEAVTKDSDNSDEHDKEK 1123

Query: 1399 -TF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
              F       YER E LGD +LK   +  +F + P  +E      R  ++ N  L+  A+
Sbjct: 1124 INFQSGMGKNYERLEFLGDCFLKMATTIAIFTENPDSNEFGYHVDRMLLICNQNLFNKAV 1183

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
             + L  Y+++  F    W   G+                         +L   K      
Sbjct: 1184 DRNLPEYVRSKSFDRRSWYPSGL-------------------------RLIRGK------ 1212

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY---------------VEGGKDAAN 1556
                     EG  +    L+ K++ADV EALIG  Y               V     + N
Sbjct: 1213 ---------EGSVNLRHALADKSVADVCEALIGAAYLTYADSSDFDMAIRAVTAVVKSKN 1263

Query: 1557 HLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHA 1616
            HLM   G    +        + P  + + + R +     +D L  +FK   LL  A  H 
Sbjct: 1264 HLMTSWGDYYAAYTPPAWQFADPTPMQKELARQI-----KDKLGYEFKSPALLRSAFKHP 1318

Query: 1617 SRPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA 1674
            S P +   +  YQRLEF+GDA+LD +    LF  + +  P  LT+ + A V+N+  A + 
Sbjct: 1319 SYPRAYENLPDYQRLEFLGDALLDMVCVDFLFHKFPDADPQWLTEHKTAMVSNQFLASLC 1378

Query: 1675 VKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG------FNSFGLGDCKAPKVLGDIV 1728
            VK  LH H+  G ++L  Q  DFV   LE   K G        ++ +    APK L D+V
Sbjct: 1379 VKLGLHKHVLSGHASLLNQTHDFVVS-LESAKKDGEADGTFTQAYWINVQHAPKYLSDVV 1437

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQAEGLE 1783
            E+  GAIF+DSG D + V   F   + P  T   L       HPV  L    Q      E
Sbjct: 1438 EAYIGAIFIDSGYDYNHVRVFFDTHIRPFFTDMALYDSFASRHPVTNLAHILQDGFGCQE 1497

Query: 1784 YKASRSGNLATVEVY 1798
            ++   S    TVE +
Sbjct: 1498 WRLMVSEVAPTVEEF 1512



 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 21/297 (7%)

Query: 690 DVIIGAAVADGKVTPKVQSL-IKIL-------LKYQHTEDFRAIIFVERVVAALVLPKVF 741
           DVI G        TP +  L IK+L       L++ +   +R I+FVE  + A++L  +F
Sbjct: 472 DVIQGHEF--NSATPTLDQLSIKVLRLWEELKLRFTNGPGYRCIVFVEMRLTAVLLADLF 529

Query: 742 A-ELPSLSFVKSASLIGHNNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIR 797
             E   L ++  A L+G   +  +     ++   TI KFR   V  L AT VAEEGLDI 
Sbjct: 530 KQEGIKLPYLSPAMLVGSQAATGLANMSFKQQVLTIHKFRQAEVNCLFATQVAEEGLDIP 589

Query: 798 QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK-- 855
            CN+V+RFDL K+V+ YIQS+GRAR+  S+Y+  IE GN   A  +  A   +  LR+  
Sbjct: 590 DCNLVMRFDLYKSVIQYIQSKGRARRQDSEYLSFIEGGNGRQARVVLQATYDQNVLRRFC 649

Query: 856 EAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI 915
            A+         D S  +    +    Y ++STGA+++  S++ ++  + S L      +
Sbjct: 650 NALPEDKKIMGFDISSSVLKGDLHYKTYLIKSTGAMLTWTSSLEVLANFASSLRQFNDEV 709

Query: 916 LRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
           L PE+++    +      +  ++QLP  +P   + G   S+M+ A+ +     CK+L
Sbjct: 710 LAPEYVVINQGQ-----NFIAEVQLPAKSPIMHMTGFPHSNMKAARCSAAFEMCKEL 761


>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1496

 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 174/343 (50%), Gaps = 37/343 (10%)

Query: 703  TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNS 761
            +PKV  L ++L +Y + ++F+ IIFVE+   A  L K+   +P L  + KSA LIGH  S
Sbjct: 351  SPKVVLLSQLLFEY-YKQNFQGIIFVEQRHVAACLSKMLPRIPPLELYFKSAQLIGHGAS 409

Query: 762  -------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                   + M     QE +  FRDG   LLVATSVAEEGLD   C +V+RFD  + ++ Y
Sbjct: 410  SVQKSQVRGMALKSQQEAVKMFRDGECNLLVATSVAEEGLDFPACELVVRFDPIQHMVGY 469

Query: 815  IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSH-------LK 867
            IQSRGRAR+  + +++M++ G  SH    +    SE  LR     R DL          +
Sbjct: 470  IQSRGRARQKAATFMVMVQEGQASHVDRYKAFSESEPQLRLVYQNREDLPKPVQDDELEE 529

Query: 868  DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
               R   +D      Y V +TGA+++ N+A+GL++  CS +P DR++ +           
Sbjct: 530  GEEREDPLDLAERERYVVPNTGAILTYNTAIGLLNHLCSLIPRDRFTPI---------HL 580

Query: 928  PGGPTEYSCKLQLPCNAPFEK----LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            P    ++   LQLP + P  K      GP   + + A++A    A K+LHE+G F + LL
Sbjct: 581  PQYSGDFEATLQLPSSLPLPKEHLTFTGPTKRTKKEAKRAAAFMAVKRLHELGVFDNYLL 640

Query: 984  PDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEW 1026
            P + +    +  D    G P+ G   H    P+ +  I++  W
Sbjct: 641  PARSATGDNDDAD----GRPI-GDVSH---VPDMMDVIVRDPW 675



 Score =  162 bits (409), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 133/234 (56%), Gaps = 18/234 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A+++N IA L+TG+GKT I+ LLI+ I        K  + VFLVPKV LV
Sbjct: 14  RRYQEEIFSRAQERNVIAALDTGSGKTYISTLLIKWIAARDAGLGK--IIVFLVPKVALV 71

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ + I  +T   V    G    D  D + W++E +   VLVMTAQI LNIL HS   M
Sbjct: 72  EQQGDFIARETPLRVSKCYGATAIDMTDRRGWRKEIELHDVLVMTAQIFLNILTHSHWTM 131

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + ++L++ DECHH  K H Y+ +M E++  TS EKRP VFGMTASP     + +  D   
Sbjct: 132 DKVSLMVFDECHHTRKNHAYNGIMREYFQWTS-EKRPKVFGMTASP-----IWNPRDAVE 185

Query: 485 KICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYD---------KAASLWS 528
            +  LE  LD+ V  +++  +EL  H P P EV+ EY           A +LW+
Sbjct: 186 SLATLERNLDAKVIAVREHVEELADHSPRPQEVLREYQASPITYPHYPATNLWA 239



 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 266/615 (43%), Gaps = 80/615 (13%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYS--SYADYYKQKYGVELIFKKQ 1296
            ++++   G+   ++ IR ++T  S  P      G  E +  SY ++Y  KY  + +    
Sbjct: 801  VMSSKEHGRPLLLKRIRNDLTPLSVPPA-----GTREAAGKSYREFYISKYTRKGV---P 852

Query: 1297 PLIRGRGVSYCKNLLS-PRFEHSEEQEGEGEEILDKTYYV---FLPPELCFIHPLPGSLV 1352
            P I  +G  YC  ++  PR   +           +KT  +     P  LC   PL   + 
Sbjct: 853  PEIPEQG--YCVEVVPFPRHTSTVYNLDGSSVPANKTQPLGAHIYPMSLCRWAPLSPDVY 910

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDA 1411
            R  + LP +  R+  +  A  ++ ++  P +    +++ALT  S    F  +R E LGD+
Sbjct: 911  RALRVLPELTHRLTDLYRARAIRAELGLPPIQDDLMIQALTLPSANAGFNNQRLETLGDS 970

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
             LK      LF ++P +HEGQL  +R+  VSN  L   A    L+ Y+ ++      W  
Sbjct: 971  VLKLCTVVHLFNRFPHRHEGQLDILRRNSVSNRTLLARAKEVMLEQYLTSEPQTMRIW-- 1028

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
                         G+  L                       D M D  +       R + 
Sbjct: 1029 --------RFALSGEVDL----------------------SDPMPDRFVS------RRIP 1052

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVD 1591
             ++L D +EA +G  +  GG   A H+              +  P+R   +PE+ +  V 
Sbjct: 1053 KRSLQDCMEASLGAGFATGGIMMALHVGT---ALGLGFGGTLLWPARYDRLPETPV-PVM 1108

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            FH +++ L  +FK   LL+EA+TH S  S   S YQRLEF+GDA++D ++ ++L+  +  
Sbjct: 1109 FHEVQEILGYEFKSGHLLIEAVTHPSFRSPTNSSYQRLEFMGDALIDLVVMRYLYNKFPT 1168

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVK-HKLHVHLRHGSSALDRQIRDFVKEVL----EELL 1706
               G+L+  R+ AV     A +AV    LH  L   +  L   I  +V  +     EE++
Sbjct: 1169 ATSGQLSWARSRAVCAPALAHIAVNVLGLHRPLLINNIELSMAISKYVPILQETSEEEII 1228

Query: 1707 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD---TSVVWQVFQPLLDPMVTPETL 1763
              G+          PK + D++ESI GA+ +D+  +   T+V+ +     L  +++P+ +
Sbjct: 1229 HSGWKH------DPPKAISDVLESILGAVLVDTHYNFEKTAVIAENALRGLLRVLSPD-M 1281

Query: 1764 PMHPVRELQERCQQQA-EGLEYKASRSG-----NLATVEVYIDGVQVGVAQNPQKKMAQK 1817
            P  PV EL     +Q    + ++ S+S      N +   +  D   VG        +A+ 
Sbjct: 1282 PRDPVSELMVWIARQGCMKISFRKSQSQSTMKRNDSMSIIVHDFAVVGPIPAQNISLAKG 1341

Query: 1818 LAARNALAVLKEKET 1832
            LAA  A  VL + E+
Sbjct: 1342 LAAERARQVLGDFES 1356


>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
          Length = 1490

 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 246/568 (43%), Gaps = 114/568 (20%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPV---PASKILEALT 1392
             L PELC +  +P    + A  LP I+RR+E   +A  L+  + +PV      K++ AL+
Sbjct: 883  LLIPELCTVDVVPWKYSQFAMYLPGIIRRIEMSFIAADLERTLLHPVGFNSIPKMVTALS 942

Query: 1393 AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
            A+S +E+  Y+R E LGD+ LK++ S  L  ++P  HEG LTR ++QMV+N  L + A+ 
Sbjct: 943  ASSARESTDYQRFEFLGDSVLKFLTSVNLLDEHPFWHEGYLTRKKEQMVANSRLARAAID 1002

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
              L  +I  D F  S+W    V+                +E+   E K    K       
Sbjct: 1003 NRLAKWIITDIFTGSKWRPRYVI---------------SEEEEFPEKKRKGPKQ------ 1041

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
                             LS+K LADVVEALIG  Y+EG    A  +++  G+ +     E
Sbjct: 1042 -----------------LSTKILADVVEALIGAAYLEGNYPKALKVIRAFGLNINWKSLE 1084

Query: 1573 VGCPS---RPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQR 1628
                S   R +  PE  L  +    LE  +   F  + LL+EAITH S  S   S  YQR
Sbjct: 1085 ERTTSLLNRASRYPEVHLSHL--KGLESLIGYHFTHKALLLEAITHPSWESDMTSLSYQR 1142

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA----RVAVKHKLH-VHL 1683
            +EF+GDA+LD ++  HLFFS  NL    +   +++ VN    A    R AV  K + +  
Sbjct: 1143 MEFLGDALLDMVVVNHLFFSPRNLSHIDMHLYKSSVVNGNFLAYLSLRCAVDAKYYGISQ 1202

Query: 1684 RHGSSAL---------------------------------DRQIRDFVKEVLE------- 1703
            R  S+ +                                 +  +RD V+  L+       
Sbjct: 1203 RAQSTEVEIVNKSRKVELWKFIRHQHQQIQHAQKICSKRYEEDLRDSVQAALDYGKDYPW 1262

Query: 1704 ------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL---- 1753
                  E  K G N F          L D+VE+I GA+F+DSG D   V  + + L    
Sbjct: 1263 TELSPLESDKSGRNKF----------LSDVVEAIIGAVFIDSGGDFETVQSLAERLGILK 1312

Query: 1754 -LDPMVTPETLPMHPVRELQERCQQQAEG-LEYKASRSGNLATVEVYIDGVQVGVAQNPQ 1811
             L  +V       HPV++L E      +G ++Y  S  G   +  V ++  ++   +   
Sbjct: 1313 VLKRLVADHVDVTHPVKKLGEAVAANGQGTVQYVQSVEGGGYSCAVMVNEEKLLSVRAAS 1372

Query: 1812 KKMAQKLAARNALAVLKEKETAEAKEKG 1839
            +  A+  AA  AL+V  EK   E    G
Sbjct: 1373 RSEARTKAAELALSVFMEKVKNETFPAG 1400



 Score =  147 bits (370), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 158/626 (25%), Positives = 264/626 (42%), Gaps = 129/626 (20%)

Query: 352 MLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFW-DAQRWQREFDTKQ----V 405
           +L+ FLVP V L  QQ EV++     V +    G    D W D + W      K     V
Sbjct: 12  LLSWFLVPNVSLGNQQYEVLKASLPPVNIQFLSGGDKVDKWSDQEIWDEILGIKDNDHAV 71

Query: 406 LVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSV 463
           +V T Q+LL+ L H  ++ME I L++ DE HH V +HP + +M EFYH   ++  + P+V
Sbjct: 72  VVSTHQVLLDALTHGFVRMEGIGLIVFDEAHHCVGQHPANRIMQEFYHPRVRKGLEVPAV 131

Query: 464 FGMTASPV------NLKGVSSQVDCA-----IKICNLESKLDSVVCT-IKDRKELEKHVP 511
            G+TASPV       L+ VS +         + +  +E+ L+++  T +++R+EL +HV 
Sbjct: 132 LGLTASPVVKSTPDQLRHVSPKFWIGVLANWVYVRVIETNLNAISRTPVRNREELLRHVH 191

Query: 512 MPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY 571
            P   V++  +  +  ++   L  +++A    A    R+    ++ A  +    +L ++ 
Sbjct: 192 PP---VLKRIQGVATDNVPSALDSLQLA---WATMDIRQDP--YIKALQSANPPDLGRIE 243

Query: 572 GVSERTESDGAANLIQKLRAINYALGELGQW---CAYKVA-------------QSFLTAL 615
               +  +     +   L    +   E G W   C  K A             +S     
Sbjct: 244 TTISKRNTYCQVQMRGLLNKAFHLRKEFGAWSVDCYLKHAIQKAIKFADEEDPESMWMEW 303

Query: 616 QNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG------------ 663
            N+E+       ++ +S LSK+        +EG +S K  K+++   G            
Sbjct: 304 NNEEK-------RYLKSILSKIAVPRDIGPIEGRLSDKVEKLIEVLLGEHKDDGGKFAGL 356

Query: 664 -FVEGGTNEIEEGELLDSHVVSGGE-HVDVIIGAAVADGKVTPKVQSLIKILLKYQHTED 721
            FVE         E+L +   +     V  ++G +  +G+    +  L+ +  +Y+  ED
Sbjct: 357 IFVEQRVGVSILAEILKTDSRTKDIFRVGTVVGVSEGNGRTRKAIYELVNLKGQYETIED 416

Query: 722 FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRV 781
           FRA                                G  N                     
Sbjct: 417 FRA--------------------------------GKKN--------------------- 423

Query: 782 TLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN----- 836
            L+V+TSV EEG+DI  C +V+ F L   + ++IQ RGRAR   S+Y+LM   G+     
Sbjct: 424 -LVVSTSVVEEGMDIPACRLVVCFSLPPNLKSFIQRRGRARMAKSNYVLMFNEGDTQGKI 482

Query: 837 --LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSL 894
                          +ET + EA  +T+     + S L   +      +Q+ESTGA+++L
Sbjct: 483 DKFKQLEMDMIEEYLDETRKLEAETKTETEDPDEDSIL---NKGRNRRFQIESTGALLTL 539

Query: 895 NSAVGLIHFYCSQLPSDRYSILRPEF 920
           +SAV  +H +C+ LP   Y  LRP F
Sbjct: 540 DSAVSHLHHFCNCLPRGEYMDLRPIF 565


>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
          Length = 1651

 Score =  171 bits (434), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 220/452 (48%), Gaps = 57/452 (12%)

Query: 1366 ESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKY 1425
            E  +L +      N  +  + IL+ALT+    + F  ER ELLGDA+LK+ VS FL +++
Sbjct: 1156 EIKILKLTPDSTANVSLQQADILQALTSKHAHDVFNLERFELLGDAFLKFSVSAFLLMRH 1215

Query: 1426 PQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP--GVLPVFDE-- 1480
               HEG LT  + +MVSN  L   A+  GL    +  RF P + W  P   V  V  E  
Sbjct: 1216 VTWHEGYLTTCKGRMVSNRNLLYCAMQYGLPGMQKVHRFDPRNEWLPPLATVPKVIREAM 1275

Query: 1481 -DTKDGDSSLFDQEKSVAEDKLG-TDKNYNEYEDDDMEDGELEGDSSSYRVL-----SSK 1533
               K+  + LF  E S  E + G   ++  +     +++ E E  S+   VL     S K
Sbjct: 1276 IKAKEMPALLFKLELSEEEVQSGIVQQSKIDAFLPMIKESEEESRSTLMAVLQHVQVSDK 1335

Query: 1534 TLADVVEALIGVYYVEGGKDAANHLMKWIGIQ----------------VESDPEEVGCPS 1577
            T+AD +EAL+GV     G + +   +   GI                 V +  +E     
Sbjct: 1336 TVADSMEALLGVCVKAVGYERSFRALSHFGIMPRDTDLAKLLRTHEYTVLNYQDERETID 1395

Query: 1578 RPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAV 1636
            R    PE + R+V +         KF++R  L++A THA+  ++ ++  Y++LEF+GDAV
Sbjct: 1396 RLLINPEKIERTVGY---------KFRNRTFLLQAFTHATYTTNTLTKSYEQLEFLGDAV 1446

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            LD LIT ++F    ++ PG+LTDLR+A VNN   A V V+ +LH ++   S  L  +I  
Sbjct: 1447 LDFLITLYIFERNPHMSPGQLTDLRSALVNNVTLACVLVRFRLHHYILSQSPMLTDKIDK 1506

Query: 1697 FVK-------------EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT 1743
            FV+              +L E  +     +       PKVLGD+ E++ GAI+LDSG D 
Sbjct: 1507 FVEVQGQKRNRIGDWVRLLTEESETPLAEY----VDVPKVLGDVFEALIGAIYLDSGCDL 1562

Query: 1744 SVVWQVFQPLLDPMVTPETL--PMHPVRELQE 1773
               W++   LL   +   +L  P+  VR+L E
Sbjct: 1563 VTTWRICYSLLQREIENFSLDTPIQVVRQLYE 1594



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 112/213 (52%), Gaps = 6/213 (2%)

Query: 297 EKMPEEQARP--YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ--NKKM 352
           +K P+E   P  YQ  + +   +KNTI +L TGAGKT IA++++R + + L+    +   
Sbjct: 4   KKEPDEDLVPRDYQQQMKDICLRKNTIVYLPTGAGKTYIALMVMREMSHQLRSNIDDGGK 63

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
            + FL   V L  QQA+       + V  Y  E+  D W   RW  EF   Q+LV T+QI
Sbjct: 64  RSFFLANTVALAKQQAQFFCRFFPFNVRLYTSEVNVDTWKQDRWLNEFREVQILVSTSQI 123

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN 472
           LL+ILRH  +    INL++ DECH AV +HP   +M E      K  +P V G++ + + 
Sbjct: 124 LLDILRHGYLSPSNINLIVFDECHRAVGQHPMHAIMKELM-GVPKNCQPRVIGLSGTLL- 181

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
            + + S+     ++  LE+   + + T+ D  E
Sbjct: 182 YRELKSKTQVEEELERLENTFSATIATVGDYDE 214



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 142/284 (50%), Gaps = 32/284 (11%)

Query: 723 RAIIFVERVVAALVLPKVF--------AELPSL-SFVKSASLIGHNNSQEMRTFQM---- 769
           +A++FV+R  +A VL  V           LP   + V+   ++G N   E     +    
Sbjct: 345 QALVFVKRRFSAKVLYHVLRLYFGHDEQNLPDEDAIVRPEFIVGVNRPMEESIEHIIVAK 404

Query: 770 --QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
             ++ I KFR  ++ +L AT+V EEG+D++ CN+V+ FD   +  +Y+QS+GRAR   S 
Sbjct: 405 HDRQVIKKFRKHQINVLCATNVLEEGIDLQMCNIVVMFDEPLSYSSYMQSKGRARMKSST 464

Query: 828 YILMIERGNLSHATF-LRNARNSEETLRKEAIERT-----DLSHLKDTSRLISVDAVPGT 881
           Y+LM+   + S  T  ++   + E TL+K  I +T      L H  D  + +  D    T
Sbjct: 465 YLLMVNDEDRSKFTARIQLYHDIENTLKKALIGKTINRPEPLEH--DVRKELLDDI---T 519

Query: 882 VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
              +   GA + L S+V L++ YC  +P D ++        ER E+ G   +    ++LP
Sbjct: 520 APFITPAGAKLDLTSSVQLLNRYCMSMPRDLFT--GTNVAWERIEQHG---KICVTVKLP 574

Query: 942 CNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             +   E + G    +++LA+Q+     CK+L+E+G  +  LLP
Sbjct: 575 LQSTIREVVHGEPMKNLKLAKQSAAFNVCKQLYEVGELSMHLLP 618


>gi|119174400|ref|XP_001239561.1| hypothetical protein CIMG_09182 [Coccidioides immitis RS]
          Length = 1357

 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 130/220 (59%), Gaps = 10/220 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND--LQRQNKKMLAVFLVPKVP 362
           R YQ+++ E+AKK N IA L+TG+GKTLIAVLL++ I     + R  +K      V  V 
Sbjct: 100 REYQVELFEKAKKDNIIAVLDTGSGKTLIAVLLLKHIIEQELIDRSAEK---PHRVDSVT 156

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV+QQA V++      V  +CG M  D W+ + W+R      V+V TA++L   L H+ +
Sbjct: 157 LVFQQAAVLQNNINQRVDKFCGAMETDLWNGETWERHLAKNMVIVCTAEVLYQCLLHAFV 216

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           KME INLLI DE H+A K HPY+ ++ +FY      KRP +FGMTASPV+ K     +D 
Sbjct: 217 KMENINLLIFDEAHNAKKDHPYARIVKDFYLKDGNAKRPKIFGMTASPVDAK-----MDV 271

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
                NLE+ L+S + T  +   L + VP P+E V  YD+
Sbjct: 272 VKAARNLETLLNSQIATASNLSLLRQSVPRPNEEVWSYDR 311



 Score =  127 bits (319), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 170/345 (49%), Gaps = 30/345 (8%)

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV--- 1573
            G+ +G + +   L+ KT+ADV EALIG   +   K+    + +K +   V SD   V   
Sbjct: 996  GQSKGATENKHALADKTIADVCEALIGACCLLASKNHRFDIAVKAVTALVSSDDHNVLNW 1055

Query: 1574 GCPSRPACVPESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASRPSSG--VSC 1625
               SR   +P+     VD   L+ A ++K      FK   LL  A TH S PS+   V C
Sbjct: 1056 EQYSRLYSIPKYQTAVVDAAELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPC 1115

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
            YQRLEF+GDA+LD    +H++  + +  P  LT+ + A V+N+    VAV+  LH HL H
Sbjct: 1116 YQRLEFLGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNH 1175

Query: 1686 GSSALDRQIRDFVKEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT 1743
             S++L  QI ++V+E+    L+ G   +++ L     PK L D+VE+  GAIF+DSG   
Sbjct: 1176 FSTSLQSQITNYVEEIEAAELESGDPPDAWTLTS-DPPKCLPDMVEAYIGAIFIDSGFSF 1234

Query: 1744 SVVWQVFQPLL-----DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVY 1798
             VV + FQ  L     D  +       HP   L  R       +++  S     A    Y
Sbjct: 1235 EVVEEFFQKFLKKHFEDMTIYDTYANKHPTTYLHNRL-----AIDFGCSNYCLKAGEVPY 1289

Query: 1799 IDG----VQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKG 1839
            +DG    V   V  +  + +A+ +A+ +  A LK  E A +K +G
Sbjct: 1290 VDGPGTRVLAAVIVH-DEVVAEGVASSSRYAKLKASEAALSKLEG 1333



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 80/191 (41%), Gaps = 47/191 (24%)

Query: 1370 LAIQLKDKINYPVPASKILE-ALTAASCQETF----CYERAELLGDAYLKWVVSRFLFLK 1424
            LA Q+K K+ Y     K+L  A T  S    +    CY+R E LGDA L       ++ K
Sbjct: 1079 LAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEFLGDALLDMACVEHIYHK 1138

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
            +P K    LT  +  MVSN  L   A+  GL S++  + F+                   
Sbjct: 1139 HPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHL--NHFS------------------- 1177

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE-GDSSSYRVLSS---KTLADVVE 1540
              +SL  Q             NY E    ++E  ELE GD      L+S   K L D+VE
Sbjct: 1178 --TSLQSQ-----------ITNYVE----EIEAAELESGDPPDAWTLTSDPPKCLPDMVE 1220

Query: 1541 ALIGVYYVEGG 1551
            A IG  +++ G
Sbjct: 1221 AYIGAIFIDSG 1231



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 24/149 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+I+   +   +NLL  R    + +EG+        YY+ L P    I  +P S+   A
Sbjct: 843  QPVIKAEIIQLRRNLLDKRTNKEKIKEGD--------YYICLEP--LTISAIPASVAAFA 892

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+ES L+A++   +++ P+     LEALT  S        Q+          
Sbjct: 893  FAFPAIISRIESYLIALEACQELDLPISPELALEALTKDSDNTDEHRAQQIHFQRGMGKN 952

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            YER E LGD +LK   S  LF   P   E
Sbjct: 953  YERLEFLGDCFLKMATSISLFAMNPDNDE 981


>gi|355683929|gb|AER97238.1| dicer 1, ribonuclease type III [Mustela putorius furo]
          Length = 560

 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 223/487 (45%), Gaps = 89/487 (18%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-----GVLP 1476
            FL+Y Q+H         + + N+++   A  K +     +   +   W  P     G +P
Sbjct: 81   FLEYDQEH--------IRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKASLGSMP 132

Query: 1477 VFDEDTKDGDSS------LFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSY 1527
             F  D +D D S        D  K+V ED       +N  E++   D     +  D  + 
Sbjct: 133  -FSSDFEDFDYSSWDAMCYLDPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTE 190

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG------------- 1574
            + ++ K++AD VEAL+G Y    G+ AA   +  +G++V       G             
Sbjct: 191  QCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIRRTGREKAVGPPRENSS 250

Query: 1575 ----------CPSRPACVPESVLRSVD---------------------------FHALED 1597
                       P+  A    SVLR ++                           F   E 
Sbjct: 251  SQQKNLSGSRAPASAAGSRSSVLRDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEK 310

Query: 1598 ALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG 
Sbjct: 311  KINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGV 370

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLK 1707
            LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         EL +
Sbjct: 371  LTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRR 430

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPM 1765
               +     D + PK +GDI ES+AGAI++DSG    +VWQV+ P++ P++      +P 
Sbjct: 431  SEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPR 490

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNAL 1824
             PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL
Sbjct: 491  SPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRAL 548

Query: 1825 AVLKEKE 1831
              LK  +
Sbjct: 549  RSLKANQ 555



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 39/234 (16%)

Query: 1252 ESIRYEMTAESSFPRK------EGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVS 1305
            +SI Y++  E     K      E  LG    +S  +   Q +   L  K  P+IR  G  
Sbjct: 181  QSISYDLHTEQCIADKSIADCVEALLG-CYLTSCGERAAQLFLCSLGLKVLPVIRRTGRE 239

Query: 1306 YCKNLLSPRFEHSEEQE------------GEGEEILDKTYY--VFLPPELCFIHPLPGSL 1351
              K +  PR   S +Q+            G    +L    Y  + +PP   F HP     
Sbjct: 240  --KAVGPPRENSSSQQKNLSGSRAPASAAGSRSSVLRDLEYGCLKIPPRCMFDHP----- 292

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAASCQE---TFCYERAEL 1407
                + L  ++   E+       + KINY     + +L+A T AS      T CY+R E 
Sbjct: 293  -DADKTLNHLISGFEN------FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEF 345

Query: 1408 LGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            LGDA L +++++ L+    Q   G LT +R  +V+N +    A+      Y +A
Sbjct: 346  LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 399


>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
          Length = 1442

 Score =  171 bits (433), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 246/536 (45%), Gaps = 70/536 (13%)

Query: 1326 EEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI--NYPVP 1383
            E+   K   +  P  +  I P+P  +VR    LP+++ ++ ++L  I    +I     VP
Sbjct: 918  EQPTAKPSQIVTPSHMARISPIPADIVRIVTHLPNLLGQM-TVLFRIDSAKEILRTNGVP 976

Query: 1384 ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
               +LEALT  S Q  F Y+R E +GD+ LK  +   LF+KY   HEGQL+ M+  +VSN
Sbjct: 977  LELLLEALTLPSVQAGFDYQRLETIGDSVLKVSMCTHLFIKYQGHHEGQLSAMKDSVVSN 1036

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
              L +      L  ++        R  +P   P   E                 +D  G 
Sbjct: 1037 ANLMRVGRQSPLSRFLITGSMPTRRTWSPPASPTISE----------------TQDDSGE 1080

Query: 1504 DKNYNEYEDDDME----DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLM 1559
              + NE +DD  E    D + E + +S+    +K+LAD  E+ +G  Y+  G +AA  + 
Sbjct: 1081 QDDSNEQKDDSNEQKENDSKGEFEKTSFH---TKSLADCTESTLGATYLSRGVEAALEVG 1137

Query: 1560 KWIGIQVESDPEEVGCPSRPACVPESVLRSVD-----------FHALEDALKIKFKDRGL 1608
            + +G+ +                P  + R VD           F  +E+ L  KFK+  L
Sbjct: 1138 EALGLPLG------------GTTPWHLRREVDVFARKSEITMLFAPVEEKLGYKFKNASL 1185

Query: 1609 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            + EA TH +   S    Y RLEF+GD++ D  + K ++  +  + PG+++  R+  VN  
Sbjct: 1186 VAEAFTHTAYDLSQGPSYNRLEFLGDSLFDLYVVKFMYLKFPKMTPGQMSWARSRLVNAS 1245

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV----LEELLKPGFNSFGLGDCKAPKVL 1724
             F ++AV  +LH H+   S+ L + +  F +EV    LEE+L+  +         APK +
Sbjct: 1246 TFGKLAVGLELHKHILTSSANLQKAVASFAQEVEEISLEEILQICWK------IDAPKAI 1299

Query: 1725 GDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM---VTPETLPMHPVREL-----QERCQ 1776
             D+ E+I GAI++DS  +  + ++    ++  +   VTP  +   P  EL      + C+
Sbjct: 1300 SDVFEAIFGAIYVDSSFNLELTFEHIHRVMANIMEYVTP-VMQGDPTSELVRWVASQGCE 1358

Query: 1777 QQAEGLEYKASRSGNLA--TVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
             Q   +   +S S      TVE  + G  +        K+A+ +AA  AL +LK++
Sbjct: 1359 AQGSTIFSSSSNSRASTNDTVETTVHGRTISRVTAATSKLARPMAAEQALNILKDE 1414



 Score =  150 bits (380), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 163/319 (51%), Gaps = 36/319 (11%)

Query: 702  VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNN 760
            +TPK++ LI IL +    +DF A+IFVE+   A  L  +   +P L  +VK+A+L+GH +
Sbjct: 371  LTPKLKILISIL-EANRADDFSALIFVEQRQVASALAWLLPLVPELRDWVKAAALVGHGD 429

Query: 761  SQE-------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                      M     + T+  FR G + L++ATSVAEEGLD + C +V+R D  +T++ 
Sbjct: 430  GSRAGFEGSGMAHAAQRSTVRNFRSGSINLVIATSVAEEGLDFQACKLVVRLDAPQTMVG 489

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLSHLKDTSR 871
            Y+QSRGRARK  S Y+++ +      A   R  R +E  LR+  + I   +     +   
Sbjct: 490  YLQSRGRARKHDSAYVVLTDPEG---AKRYRGFRGAEPHLRRIYQRISEEEAQQDGEMDV 546

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
                D      Y V+STGAVV+ ++A+GL+H +CSQL  DR++            KP  P
Sbjct: 547  EEEEDVD-NERYVVKSTGAVVTPSTAIGLLHLWCSQLEVDRFT------------KPPAP 593

Query: 932  T-----EYSCKLQLPCNAPFEKLEGPVCSSMRL----AQQAVCLAACKKLHEMGAFTDML 982
                  +Y CK+  P       L GP+   ++     A++A      +KLH++  F D L
Sbjct: 594  EFHITGKYMCKISAPPCILNPALSGPIHGPLKKTRDGARRAAAFLFVQKLHKLEIFDDYL 653

Query: 983  LPDKGSGEQQEKVDQNDEG 1001
            LP K    + + + Q  +G
Sbjct: 654  LPFKKRSSKADDLSQRLDG 672



 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 33/243 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNKKMLAVFLVPKVPL 363
           R YQ ++ ++A  +N I  ++TG+GKT IAV+L++ I +      N K +AVFLV  VPL
Sbjct: 21  RLYQQEIFQRAVNENVICAMDTGSGKTQIAVMLLKHIMSLRPADSNPKKVAVFLVASVPL 80

Query: 364 VYQQAEVIREQT---------------GYVVGH-YCGEMGQDFWDAQRWQREFDTKQVLV 407
             QQ + +  Q                 Y  G  + G MG D+WD +RW + F    V+V
Sbjct: 81  AEQQGDFLESQLPLHVNVRPVFLLLAGAYADGQKFYGAMGVDYWDRERWAKAFAESDVMV 140

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
           MTAQ+  ++L H+           +D+ HH  K H Y+ +M   YH     +RP +FGMT
Sbjct: 141 MTAQVFHDLLNHAHWS--------IDKAHHCNKNHVYAQIMRTHYHHCPVSERPRIFGMT 192

Query: 468 ASPV-NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEVVVEYDKAAS 525
           ASP+ N++      + A  +  L+  +D+ V  +KD   EL  + P P E V+E    +S
Sbjct: 193 ASPIFNIR------NPAQSLAQLQETMDAKVLAVKDNVLELALNAPKPQEFVMECPPPSS 246

Query: 526 LWS 528
            +S
Sbjct: 247 DYS 249


>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
            [Dichomitus squalens LYAD-421 SS1]
          Length = 1526

 Score =  171 bits (432), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 165/589 (28%), Positives = 259/589 (43%), Gaps = 108/589 (18%)

Query: 1276 YSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYV 1335
            YS+Y D       +E+ +   PL+  R +   +N L P  E   + E   +   D  +  
Sbjct: 917  YSAYPD-------LEITY---PLLVVRSLPKRRNFLIPFPEEDTDHEIPSQS-GDAPF-- 963

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI-----LEA 1390
             L P+   +     + V+    LPSI+R +   L    L+  +    P S +     + A
Sbjct: 964  LLHPQYTLVELASQTEVQYTLLLPSILRWLAMALTVHSLRTSLFKQNPVSTVALRHLVTA 1023

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +TA + QE F Y+R E LGD  LK++ S  L+  +P  HEG L+R +   V+N+ L ++A
Sbjct: 1024 ITAPAAQERFHYQRLETLGDTVLKFITSNLLYADFPLWHEGYLSRKKDHAVANVNLARWA 1083

Query: 1451 LSKGLQSYIQADRFAPSRW------AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
            + KGL  +I  DRF P +W      AA     + D+ +++G  +        A D    +
Sbjct: 1084 VKKGLYRWIIRDRFIPRKWKPHYSSAAGAFDEILDDRSREGTPT--------ASDAAAQN 1135

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKW--I 1562
             N  E      ED            LS+K LADVVE+LIG  Y +GG D A   +    +
Sbjct: 1136 GNSKESRKGKAED------------LSTKMLADVVESLIGAAYEDGGFDRAIDCVTAFNL 1183

Query: 1563 GIQVESDPEEVGCPSRPACVPESVLRSVD--------FHALEDALKIKFKDRGLLVEAIT 1614
            G+  +  PE +G            + +VD           +E  +  +F  R  LV+A+T
Sbjct: 1184 GLSWKKLPEYIGA-----------MHAVDDIDDIPEQLALVEQMINYRFARRTFLVQALT 1232

Query: 1615 HASRPSS-GVSCYQRLEFVGDAVLDHLITKHLFFSY-TNLPPGRLTDLRAAAVNNENFAR 1672
            HAS          +RLEF+GDA LD ++  +L+ +   +  PG +   + A VN+   A 
Sbjct: 1233 HASYQGDFATMSLERLEFLGDAALDMIVVDYLYHAEGKDYSPGYMHIKKMAVVNSHILAY 1292

Query: 1673 VAVKHKLHVH-------LRHGSSALD----------------RQIRD----FVK------ 1699
              +K  + V          HG  A+D                R + D    F++      
Sbjct: 1293 TCLKTAVTVESTMPTWSPEHGLEAVDDSQQVYLWQCLLHSSHRVLEDQNLTFLRYQKHGA 1352

Query: 1700 EVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL----- 1753
            E+ + L       + GL   +APK + D+VESI GA+++DS  D   V QV + L     
Sbjct: 1353 EIADALENDAVYPWAGLTSLQAPKFISDMVESILGAVYVDSFGDLGKVRQVMETLGLMRV 1412

Query: 1754 LDPMVTPETLPMHPVRELQERCQQQA--EGLEYKASRSGNLATVEVYID 1800
            L+ +V  +   +HPV  L+    Q    + +EYK ++     T  VYID
Sbjct: 1413 LERVVHDDVDALHPVSRLEIWAAQHKPRKEVEYKLTKEKGDVTCAVYID 1461



 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 22/223 (9%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
             R YQ ++L+++K++N +  L+TG+GKT IAVL ++    + +R+++K ++ F+ P V 
Sbjct: 21  HTRAYQQELLDESKRRNIVIALDTGSGKTHIAVLRVK---YEAERESRK-VSWFIAPTVA 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           LV QQ+EVI+      VG+  G    + W DA  W+      +++V T Q+LL+ L H  
Sbjct: 77  LVEQQSEVIKTAIPVSVGYVSGASEPNQWKDAGLWRGIIAKHRIMVTTPQVLLDALHHGY 136

Query: 422 IKMEA-INLLILDECHHAVKKHPYSLVMSEFYH---------TTSKEKRPSVFGMTASPV 471
           + M + I+LL+ DE HHA+ KHPY+++M + Y          T++   RP V G+TASP 
Sbjct: 137 VDMGSDISLLVFDEAHHAIGKHPYNMIMKKHYFGLPPRSPLGTSTSRVRPMVLGLTASPT 196

Query: 472 NLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMP 513
                 + VD A +  +LE  LDS + + + +R EL ++V  P
Sbjct: 197 ----YGANVDVAFR--DLEKNLDSTIRSSRNNRHELAQYVHRP 233



 Score =  110 bits (276), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 164/347 (47%), Gaps = 69/347 (19%)

Query: 700 GKVTPKVQSLIKILLKYQHT-----EDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSA 753
             +TPKV++L+  LL  +       E++  IIFV R    LVL ++   +P  S   +  
Sbjct: 384 ANLTPKVRTLVDSLLVEEALFRSMDEEYSGIIFVTRRDTVLVLAELLRRIPETSHLFRIG 443

Query: 754 SLIGHNNSQEMRTF----------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVI 803
            L+G ++S +  +F             + +  F+ G   L+V+TSVAEEG+DI+ C  V+
Sbjct: 444 CLLGSSSSFKRHSFLDITRSMLDESQSDVLRDFKIGDKNLIVSTSVAEEGIDIQACGSVV 503

Query: 804 RFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK-EAIERTD 862
           RFD+   V+++ QSRGRAR+  S +++M ++                E +RK E  ER  
Sbjct: 504 RFDIPPNVVSWAQSRGRARRKRSSFVIMFDQA------------EPREVVRKWEETERRM 551

Query: 863 LSHLKDTSRLISV-------DAVPGTV-YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
           ++   D  R  +        D + G   ++V STGA++++++AV  ++ +C+ +P+  + 
Sbjct: 552 MAAYNDPRRDAAASVEEDDFDDLDGYCEFEVASTGALLTIHTAVPHLNHFCAVIPTGGHE 611

Query: 915 ILRPEFIMERHEKPGGPTEYSCKLQ-LPCNAPF-EKLEGP-------------------- 952
            L P + ++       P +Y+     LP +A F E+  GP                    
Sbjct: 612 HLVPIYELD-------PPDYAEGWHALPEHARFTERYTGPWGATVTLPRALPPHLRKFSV 664

Query: 953 --VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
             +  + R AQQ V   A   L++ G   + LLP   SG + EK D+
Sbjct: 665 DRIHRTKRRAQQRVAFEAYVALYQAGLLNNHLLP-HTSGIEPEKEDE 710


>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
            pisum]
          Length = 1489

 Score =  170 bits (431), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 183/363 (50%), Gaps = 59/363 (16%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+ +R
Sbjct: 1118 DHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLR 1177

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG----------------------- 1473
             + VSNL LY+    K     + + +F P   W  P                        
Sbjct: 1178 SKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTLWNM 1237

Query: 1474 -VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSYRVL 1530
              LP F + T        + E+ + + K+G       + ++D+E+  L    +  +   +
Sbjct: 1238 ITLPTFKDPTDK------EIEEVIQQFKVG-------FSNEDIENTPLFVPYNLVTQHSI 1284

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPESVLR 1588
              K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     +LR
Sbjct: 1285 PDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SPLLR 1341

Query: 1589 SVD------------FHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDA 1635
            +VD            F + E  L   F+DR  L++A+THAS  P+    CYQRLEF+GDA
Sbjct: 1342 NVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQRLEFLGDA 1401

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD+LIT+HL+       PG LTDLR+A VNN  FA +AV++  H + +H S  L   + 
Sbjct: 1402 VLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSPGLSDVVC 1461

Query: 1696 DFV 1698
             FV
Sbjct: 1462 RFV 1464



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 40/338 (11%)

Query: 718  HTEDFRAIIFVERVVAALVLPKVFAEL------------PSLSFVKSASLIGHNNSQEMR 765
            + E   AII V   + A +L  +F +L            P  +  K A  I      E+ 
Sbjct: 185  YEETICAIILVNNKMTASILYYLFLDLKNSNKEDFGWIQPQYTVDKEADPITEPKEFEIE 244

Query: 766  TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
              + +ET+ +FR     +L+ T V E G+D+ +CN+VI +++  +  +Y++S+ RA+   
Sbjct: 245  HKKQEETLRRFRQRECNVLIGTKVLEAGIDLPRCNLVINYNIPLSYKSYLRSKSRAKTLD 304

Query: 826  SDYILMIERGN----LSHATFLRNARN---SEETLRKEAIERTDLSHLKDTSRLISVDAV 878
            + YILM +       LS     ++      S  TL+   +E+   +   D          
Sbjct: 305  AHYILMFDEDATSNILSRLKLYKDINQMLLSHCTLKDIDMEKETYA---DRYNWFVTPFK 361

Query: 879  PGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKL 938
            PG     +   A V + +A+GL++ YC++LPSD ++ L P +  +       P  + C +
Sbjct: 362  PGK----KEDSAFVDMATAIGLVNRYCAKLPSDTFTKLSPIWKTQSVVYENQPM-FVCSI 416

Query: 939  QLPCNAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP------------D 985
            +LP N+P +  + G       LA++   L  C++LH  G   D L P            D
Sbjct: 417  RLPINSPIKHDIHGHPMPCEILAKRIAALEVCRQLHSHGELDDTLQPITKESFHALFNAD 476

Query: 986  KGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            +   + ++ +   D  EP PGT + R++Y + +A+ L 
Sbjct: 477  EVLPDAEDALIPWDTEEPRPGTNKRRQYYYKRIAEALN 514



 Score = 61.6 bits (148), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 20/138 (14%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLE-YSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            FYV  I   +  +S FP      G +E Y ++ DYY  KY +++   +QPL+     S  
Sbjct: 699  FYVAEICTHLNPKSPFP------GSIENYKTFEDYYYLKYSLKIQNLEQPLLDVDHTSAR 752

Query: 1308 KNLLSPRFEHSE----------EQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             N L+PR+ + +           +  + + +  K   V   PELC +H  P S+ R A  
Sbjct: 753  LNFLTPRYMNRKGVILPTSSDATKRAKRDNLSQKQILV---PELCNVHLFPASMWRKAVS 809

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LP I+ R+ ++LLA +++
Sbjct: 810  LPCILYRINALLLADEIR 827


>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
 gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
          Length = 1518

 Score =  170 bits (431), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 19/262 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKM---LAVFLVPK 360
           R YQL++ E+AK+KN IA LETG+GKTLIAVLL++ +   +L  +   +   ++ FLV  
Sbjct: 112 REYQLELFEKAKEKNIIAVLETGSGKTLIAVLLLKHVIEQELTDRGVGLPPRISFFLVDS 171

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG M  D W+ + W+  F    V+V TA++L   L HS
Sbjct: 172 VTLVYQQAAVLQNNIPQKIDKFCGAMQTDLWNKETWEGHFKRNMVIVCTAEVLHQCLLHS 231

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I++  INLLI DE HHA K+HPY+ ++ +FY     E++P +FGMTASPV+ K     V
Sbjct: 232 FIQIGQINLLIFDEAHHAKKEHPYARIIKDFY-LKELERKPRIFGMTASPVDAK-----V 285

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLKQ--- 535
           +       LE+ LDS + T  +   L + V  P E V EYD+  + +   L+ QL++   
Sbjct: 286 EVVSAAKTLENMLDSQIATASNPSLLRQSVARPIEEVWEYDRLEAPFETPLYTQLREKFG 345

Query: 536 ----MEVAVEEAAQSSSRRSKW 553
               +E   + + ++SS    W
Sbjct: 346 DIKVLEKIFKFSRETSSNLGSW 367



 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 252/588 (42%), Gaps = 98/588 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   +   +N L       +  E +    +D  YYV +  E   I  +   L    
Sbjct: 963  QPVLRSELIQLRRNFL-------DIDENQKSATVD--YYVCV--EALKISSISVPLATQI 1011

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+++ R+ES L+A++  +K+   +P    LEALT  S         Q  F       
Sbjct: 1012 FVFPAMIWRMESYLIALEACEKLQLKIPPELALEALTKDSENTEDYGMEQIKFQSGMGKN 1071

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   +  +I++
Sbjct: 1072 YERLEFLGDCFLKMATSISLFAMNPDNDEYDYHVKRMLLICNQNLFNNAIILEIFKFIRS 1131

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+  +  +D K                                     E
Sbjct: 1132 RSFSRRAWYPEGLTLLKGKDKK-------------------------------------E 1154

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESDPEEV------- 1573
            G +     L+ KT+ADV EALIG   + GG D    +  K + + V SD   V       
Sbjct: 1155 GPNGPEHALADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNSDDHRVERWADYS 1214

Query: 1574 ---GCPSRPACVPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQ 1627
                 PS    V  +    +D  + ++  L   F+   LL  A  H S PS  + V CYQ
Sbjct: 1215 KLYSLPSYQTAVASA--SEIDVANQIKSKLGYCFRYPKLLRSAFMHPSYPSQWANVPCYQ 1272

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD++LD +   HLF  Y +  P  LT+ + A V+N+    +AV   LHVHL H S
Sbjct: 1273 RLEFLGDSLLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHIS 1332

Query: 1688 SALDRQIRDFVKEV--LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            + L  QI  + +E+  ++  ++    ++   + + PK L DIVE+  GA+F+DS  +  V
Sbjct: 1333 NTLQGQITSYTEELQAMKIKMEGNLEAWTYTN-EPPKCLPDIVEAYLGAMFVDSNFNFDV 1391

Query: 1746 VWQVF----QPLLDPMVTPETLP-MHPVRELQER------CQQQAEGLEYKASRSGN--- 1791
            V   F    Q   + M   +T    HP+  L  R      C   A   +      G    
Sbjct: 1392 VDDFFRKFIQHYFEDMSVYDTFANKHPITFLHTRLAVDFGCTFYALKADEIPCVDGTTVR 1451

Query: 1792 -LATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
             LA V V+ D V  GVA +P  + A+  A++NAL +L+E   A+ + K
Sbjct: 1452 ALAAVCVHDDIVAEGVAISP--RHAKLKASQNALQILEEMSAADFRAK 1497



 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 146/287 (50%), Gaps = 17/287 (5%)

Query: 693 IGAAVADGKV-TPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
            G  +A+ K+ +PKV  L   LL+ ++   D R I+F  +   A +L  +F ++ S  ++
Sbjct: 422 FGDPIANPKLLSPKVLLLRDELLRRFKENPDTRCIVFTAQRHTARILRDLFQKIRS-QYI 480

Query: 751 KSASLIGHNNSQEMR----TFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
           +   L+G  +  +      +F+ Q   +  FR G +  L ATSVAEEGLDI+ CN+++RF
Sbjct: 481 RPNLLVGVRSGGDKIGLDISFREQFLNVIAFRKGEINCLFATSVAEEGLDIQDCNLIVRF 540

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSH 865
           DL  T++ YIQSRGRAR   S +  M+ER NL H T +   R SEE L +      +   
Sbjct: 541 DLYSTLIQYIQSRGRARHTESTFAHMVERNNLIHETAVEEVRRSEEVLTRFCKSLPEDRL 600

Query: 866 LK---DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
           LK   D   ++  D    + Y ++STGA ++  S++ ++  Y S L  ++    +  +I+
Sbjct: 601 LKGSGDIDMIMEKDRQQKS-YIIKSTGAKLTYPSSLAVLAHYASTLQYEKELSTQVSYII 659

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
             H K G    + C+  LP  +P     G   S    A+Q+     C
Sbjct: 660 --HPKDGA---FICETILPEKSPIRGCMGKSASRKLFAKQSAAFETC 701


>gi|74204500|dbj|BAE23515.1| unnamed protein product [Mus musculus]
          Length = 514

 Score =  170 bits (430), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 224/477 (46%), Gaps = 77/477 (16%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV---- 1477
            FL+Y Q+H   +  M   M S   + + +LS    S    +   P + A+ G +P     
Sbjct: 36   FLEYDQEHIQFIDSML--MGSGAFVRKISLSPFSASDSAYEWKMPKK-ASLGSMPFASGL 92

Query: 1478 --FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGELEGDSSSYRVLSS 1532
              FD  + D    L D  K+V ED       +N  E++   D     +  D  + + ++ 
Sbjct: 93   EDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSISYDLHTEQCIAD 150

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----------ESDPE---------- 1571
            K++AD VEAL+G Y    G+ AA   +  +G++V             DP           
Sbjct: 151  KSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKS 210

Query: 1572 -------------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFK 1604
                               E GC   P  C+      E  L  +   F   E  +  +FK
Sbjct: 211  LSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFK 270

Query: 1605 DRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            ++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A
Sbjct: 271  NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA 330

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFG 1714
             VNN  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +   
Sbjct: 331  LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEK 390

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQ 1772
              D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL 
Sbjct: 391  EEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELL 450

Query: 1773 ERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            E   + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK
Sbjct: 451  EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLK 505



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 236  IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 283

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 284  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 343

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 344  YDYHKYFKA 352


>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Coniophora puteana RWD-64-598 SS2]
          Length = 1520

 Score =  170 bits (430), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 165/327 (50%), Gaps = 46/327 (14%)

Query: 704 PKVQSLIKILLKYQHTE--DFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNN 760
           PKV++L+ +LL++       F  I+FVE+   A+ L K+   +P L   ++ A L+GH  
Sbjct: 396 PKVKALVDVLLEHHSASPGSFHGIVFVEQRHVAMCLAKILPRIPELREHIRCAELVGHGT 455

Query: 761 SQEMRTFQ-------------MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
             + +  Q              Q+ +  FR+G++ LL+ATSVAEEGLD   C++V+RFD 
Sbjct: 456 GHQHKKNQPPTAQARGMGLARQQDIVRSFREGKLNLLIATSVAEEGLDFPACDIVVRFDP 515

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
              ++ Y+QSRGRAR   S +++M++ G  +H    RN   SE  L+K    R  L   +
Sbjct: 516 VHHMVGYVQSRGRARTKTSAFVIMVQAGYDTHRERYRNLSESEPELKKVYQSREQLPQPE 575

Query: 868 DTSRLISVDAV-----PGTV-----YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
                 S +       P  +     Y V STGA ++  SA+GL+++ CS LP D+Y+   
Sbjct: 576 PEPSSESEEGEVEEEDPADIAVRERYVVPSTGAALTYGSAIGLVNYLCSLLPHDQYT--- 632

Query: 918 PEFIMERHEKPGGPT---EYSCKLQLPCNAPF----EKLEGPVCSSMRLAQQAVCLAACK 970
                    +P  P    +Y+  L LP + P      +  GP+  S R A++AV   A K
Sbjct: 633 ---------EPPTPKYFGDYAATLDLPASLPLPLDKRRFRGPIRRSKREAKRAVAFMAVK 683

Query: 971 KLHEMGAFTDMLLPDKGS-GEQQEKVD 996
           +LH++  F D LLP  G+ G   E  D
Sbjct: 684 ELHKLNVFDDYLLPSSGAKGRNTEDAD 710



 Score =  164 bits (414), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 131/220 (59%), Gaps = 13/220 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I++LLI+ +   LQ   +  + VFLVPKV LV
Sbjct: 28  RNYQEEIFRRAQEGNVIAALDTGSGKTFISILLIKWMV--LQEHARDKVIVFLVPKVALV 85

Query: 365 YQQAEVIREQT--GYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            QQA  I + T   + V  + G +  D  D   WQ+ F+   V+VMTAQI LNIL HS  
Sbjct: 86  EQQASFISKHTPSSFRVKKFHGSLDLDLADRGNWQKSFEGSDVVVMTAQIFLNILTHSHW 145

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVD 481
            +E ++LLI DECHH  K H Y+ VM E++ T S   RP VFGMTASP+ N K      D
Sbjct: 146 SIEKVSLLIFDECHHTRKNHAYNGVMREYF-TLSTVHRPKVFGMTASPIWNPK------D 198

Query: 482 CAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEY 520
               +  LE  L++ V  +++   EL +H P P E++ EY
Sbjct: 199 AQGSLLTLEKNLNATVIAVREHLAELLEHSPRPLEIIKEY 238



 Score =  137 bits (344), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 155/623 (24%), Positives = 264/623 (42%), Gaps = 84/623 (13%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESS-FPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQP 1297
            ++     G+   +++IR ++TA S+  P       P  Y  + + + +K     + K  P
Sbjct: 858  VMNTNQHGRPLILQNIREDLTAMSTPMPGTREDAWPTYYEFWVNRWTRKDREADVPKDCP 917

Query: 1298 LIRGRGVSYCKNLLS------PRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
            LI   G +Y     S       R E+++  + +     D    +  P + C I   P  +
Sbjct: 918  LI---GATYAPRKPSGAYRVQARLENADRFKNQ-----DVGLGLLAPRDCCRIVHFPPHI 969

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGD 1410
                  LP + RR+  +  A   + ++  P  A  +L EA +  +   T+  +R E LGD
Sbjct: 970  YNAFHLLPKVCRRLTDVYRAQAQRFELGLPPIADDLLIEAASLPTTLHTWNNQRFETLGD 1029

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWA 1470
            + LK  V+  +  KYP +HEGQL+++RQ  VSN  L   A   GL+ ++ ++  +   W 
Sbjct: 1030 SVLKLGVTVHIMNKYPHRHEGQLSKLRQSSVSNRTLLARAKEIGLEIFLNSETQSLQSW- 1088

Query: 1471 APGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS----- 1525
                                         +              +  G  E  SS     
Sbjct: 1089 -----------------------------RYVHPSECTASASAALTAGTAESPSSKAPAR 1119

Query: 1526 -SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPE 1584
             + R    ++L D +EA +G  +  GG D A      +G+       E+   +R   VP+
Sbjct: 1120 RAKREFPRRSLQDCMEATLGAAFYHGGMDMALRAGTALGLSFGG---ELPWCARYGRVPD 1176

Query: 1585 SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKH 1644
                   F  L+  L  +F    LLVEA TH S  +S  + YQRLEF+GDA+LD ++ ++
Sbjct: 1177 PSPAPPLFEELQSGLGYEFHRGDLLVEAATHPSFATSAGASYQRLEFLGDALLDVVVMRY 1236

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL------RHGSSALDRQIRDFV 1698
            LF  Y     G+L+  R+ AV     A VAVK +L++H          S A+ R +    
Sbjct: 1237 LFHKYPRATSGQLSVARSRAVCGPTLASVAVK-RLNLHQILLINNVELSIAISRHVPLLQ 1295

Query: 1699 KEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG----RDTSVVWQVFQPLL 1754
                +E++   +          PK L DI+ES+ GA+ +DS     +  +VV +V   +L
Sbjct: 1296 NLPTQEIVLKAWKY------DPPKALSDIMESVFGAVLVDSAYNYEKAAAVVEEVMSEVL 1349

Query: 1755 DPMVTPETLPMHPVRELQ--------ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGV 1806
            + +++P ++   PV +L          R   Q      +  R+ +++ +   I  V    
Sbjct: 1350 E-LISP-SVARDPVTDLMLWSAAAGCSRITFQKSQSHPELRRNDSISVLAHGIVIVGPVT 1407

Query: 1807 AQNPQKKMAQKLAARNALAVLKE 1829
            A NP   +++ LA+  A A+L +
Sbjct: 1408 AANP--SLSKGLASERARAILDD 1428


>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
          Length = 1475

 Score =  170 bits (430), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 226/492 (45%), Gaps = 101/492 (20%)

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-------SRWAAP-- 1472
            FL+Y Q+H         Q + ++++       GL ++++    +P         W  P  
Sbjct: 997  FLEYDQEH--------IQFIDSMLM-------GLGAFVRKISLSPFSASDSAYEWKMPKK 1041

Query: 1473 ---GVLPV------FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD---DMEDGEL 1520
               G +P       FD  + D    L D  K+V ED       +N  E++   D     +
Sbjct: 1042 ASLGSMPFASGLEDFDYSSWDAMCYL-DPSKAVEEDDFVVG-FWNPSEENCGVDTGKQSI 1099

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-----------D 1569
              D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V             D
Sbjct: 1100 SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALD 1159

Query: 1570 PE-----------------------------EVGCPSRPA-CV-----PESVLRSV--DF 1592
            P                              E GC   P  C+      E  L  +   F
Sbjct: 1160 PAQENGSSQQKSLSGSCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGF 1219

Query: 1593 HALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTN 1651
               E  +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+     
Sbjct: 1220 ETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQ 1279

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-------- 1703
              PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFVK  LE        
Sbjct: 1280 HSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMD 1339

Query: 1704 -ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--P 1760
             EL +   +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++    
Sbjct: 1340 SELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFS 1399

Query: 1761 ETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLA 1819
              +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  A
Sbjct: 1400 ANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAA 1457

Query: 1820 ARNALAVLKEKE 1831
            AR AL  LK  +
Sbjct: 1458 ARRALRSLKANQ 1469



 Score =  150 bits (380), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 163/300 (54%), Gaps = 25/300 (8%)

Query: 745  PSLSFVKSASLIGHN-NSQEMRTFQMQ-------ETIAKFRDGRVTLLVATSVAEEGLDI 796
            P L+++ S  + GH     + R+ QM+       E + KFR     LL+ATSV EEG+DI
Sbjct: 28   PELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDI 87

Query: 797  RQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRK 855
             +CN+V+RFDL     +Y+QS+GRAR P S+Y+++ +   + S    L+  +  E+ LR 
Sbjct: 88   PKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRN 147

Query: 856  EAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI 915
            +  +  D +     + +   DA P  V + +  G  V++N+A+G I+ YC++LPSD ++ 
Sbjct: 148  KCSKSADGAEADVHAGVDDEDAFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTH 207

Query: 916  LRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHE 974
            L P+      E P G T YS  L LP N+P    + GP   S+RLA++ V L  C+KLH+
Sbjct: 208  LAPK--CRTRELPDG-TFYS-TLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHK 263

Query: 975  MGAFTDMLLPDKGSGEQQEKVDQNDEGEPL--------PGTARHREFYPEGVADILQGEW 1026
            +G   + L+P    G++  K ++  +            PG+ + R+ YP+ + + L+  +
Sbjct: 264  IGELDEHLMP---VGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESY 320



 Score = 79.7 bits (195), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 20/138 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 503  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLTNLNQPLLDVDHTSSR 555

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 556  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 612

Query: 1358 LPSIMRRVESMLLAIQLK 1375
            LPSI+ R+  +L A +L+
Sbjct: 613  LPSILYRLHCLLTAEELR 630



 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 856  ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 915

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVL 1475
            Y+    KGL S +    F  P  W  PG +
Sbjct: 916  YRLGKKKGLPSRMVVSIFDPPVNWLPPGYV 945



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GRL+ +R+  V+
Sbjct: 854  GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVS 911

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  K  L
Sbjct: 912  NCNLYRLGKKKGL 924



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 1197 IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 1244

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 1245 YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 1304

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 1305 YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 1337

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 1338 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 1377


>gi|413918888|gb|AFW58820.1| hypothetical protein ZEAMMB73_649074, partial [Zea mays]
          Length = 237

 Score =  170 bits (430), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 136/218 (62%), Gaps = 7/218 (3%)

Query: 298 KMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           K P   AR YQLD+ ++A  +N I +L TG GKT IAVLL+  +   L R+  + + VFL
Sbjct: 19  KDPRTIARKYQLDLCKRAVDENIIVYLGTGCGKTHIAVLLMYEL-GHLIRKPSREVCVFL 77

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            P +PLV QQA VI + T + V  Y G  G+   D Q W++E    +VLVMT QILL+ L
Sbjct: 78  APTIPLVRQQAMVIADSTNFKVQRYYGS-GKHSRDHQAWEKEMGEYEVLVMTPQILLHNL 136

Query: 418 RHSIIKMEAINLLILDECHH--AVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG 475
           RH  I+M+ I LLI DECHH  A K+HPY+ +M EFY   + +K P VFGMTASP+  KG
Sbjct: 137 RHCFIRMDLIALLIFDECHHAQAQKRHPYAQIMKEFY--NNADKHPRVFGMTASPIIGKG 194

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMP 513
            S+++     I +LE  L++ VC++ D  ELE  +  P
Sbjct: 195 GSNKLTYTKCINSLEELLNAKVCSV-DNVELESVIASP 231


>gi|242809985|ref|XP_002485488.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218716113|gb|EED15535.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1420

 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 186/731 (25%), Positives = 335/731 (45%), Gaps = 107/731 (14%)

Query: 287 GKVGKKSE---AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN 343
           G  G  SE   A +K    + R YQ ++L ++ ++NTI  +ETG+GKT IAVL I+    
Sbjct: 4   GSPGDGSEPLSAMDKPNNIKPRAYQQEMLAESLRQNTIVAMETGSGKTQIAVLRIQ---E 60

Query: 344 DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTG-YVVGHYCGEMGQDFWDAQR-WQREFD 401
           +L R + K L  FL P V L  QQ  VI +Q   Y      G    D W  Q+ W +   
Sbjct: 61  ELSRCSPKKLVWFLTPTVALAEQQYTVISKQLPIYQSRLLLGSDNVDHWSTQQIWDKILL 120

Query: 402 TKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEK 459
             +++V T Q+LL+ + H  +K+  ++LL+ DE H  VK  P++ +M  ++H   +  ++
Sbjct: 121 NIRIVVSTPQVLLDAMCHGFVKLSGLSLLVFDEAHRCVKASPFNGIMRLYHHARKSGLDE 180

Query: 460 RPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVV 518
            P++ G+TA+       +     A+K+  LE  L ++  T + +R+EL K    P   +V
Sbjct: 181 LPAILGLTAT-----PATKATAEAVKL--LEDNLHAICRTPVIEREELLKWTHKPELSIV 233

Query: 519 EY----DKAASLWSLHEQLKQMEVA-VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGV 573
            Y    D+   +    + + ++ +A +E      S R+K       D  ++E L ++   
Sbjct: 234 TYSSQSDQTTEILKGLDDILELTLADIENDPYVKSLRAK-----KDDKKSQEILIKLLDS 288

Query: 574 SERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 633
            +        +L Q+ + IN    ELG W A                             
Sbjct: 289 GKTFTRKEIMSLAQRAQVIN---AELGSWAAD---------------------------- 317

Query: 634 LSKVVSLLQC--ELVEGAVSKKDAKVV----DSENGFVEGGTNEIEEGELLDSHVVSGGE 687
               V ++ C  + +E AV + D  +     D+E  ++      ++   +L +   +   
Sbjct: 318 ----VFVVTCAEKFIEAAVHRSDNNIFRQWEDAEKIYM------MQYLSMLPAIAKTR-- 365

Query: 688 HVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL 747
                +  +V D  ++ K +SLI  +    +   +R I+F E+    ++L  + +  P  
Sbjct: 366 -----VWGSVPD-HISQKAKSLITTIAN-TYNPGYRVIVFAEQRATVIMLAHLLSVHPLT 418

Query: 748 SFVKSASLIGHNNS-------QEMRTF-QMQETIAKFRDGRVTLLVATSVAEEGLDIRQC 799
             + +   +G++N         E+ T  + ++ + + R G+  +L+AT+V EEG+D+  C
Sbjct: 419 KGIVTKYFLGNSNYANRKSNITELSTLVEQKDVLTELRVGKTNVLIATNVLEEGIDVPAC 478

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
           N+VI FD  K + ++IQ RGRAR   S  +L I+ GN      L    + EE L++  I 
Sbjct: 479 NIVICFDPPKDLRSFIQRRGRARDRQSRLVLFID-GNDDDG--LAKWESMEEKLKE--IY 533

Query: 860 RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPE 919
             ++  LK+   L  ++     + +V ST AV++  +A   +  +C+ + S  ++  +PE
Sbjct: 534 ADNMRELKEIKALEDIEEESTEILKVPSTEAVLNHQNAQPFLAHFCATV-SYAHTTNQPE 592

Query: 920 FIMERHEKPGGPTEYSCKLQLP------CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLH 973
           +I+ER E   G T+ + K+ LP          F K +     + + A++     A   L+
Sbjct: 593 YIIERQEVSLGFTQITAKVVLPSYIDPSLRVAFSKSK---WRTEKAAKRDAAFQAYIALY 649

Query: 974 EMGAFTDMLLP 984
           + G   D L+P
Sbjct: 650 DAGMVDDNLMP 660



 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 204/489 (41%), Gaps = 105/489 (21%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P  LC I  LP    + A  +PSI  ++E + +A +L   +   V     S +L A++A+
Sbjct: 908  PVRLCHIDRLPAKFSKFALFIPSITHKIEVLFIAERLARTVLSRVKFENLSHVLTAISAS 967

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            S QE   Y+R E LGD+ LK + S  L +K P  HEG L+  +  +VSN  L++ AL  G
Sbjct: 968  SAQEEHDYQRYEFLGDSLLKLITSIHLVVKKPLWHEGLLSAEKDTIVSNGRLHRTALDLG 1027

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I    F   +W  P  +  F+               +V E+K              
Sbjct: 1028 LDKFILTKSFTGRKWR-PNYISQFE---------------TVTEEK-------------- 1057

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WIGIQVE 1567
                         R +S+KTLADVVEAL+G  +++GG +      K       W  I   
Sbjct: 1058 -------------RQMSTKTLADVVEALLGAAFLDGGYEKLESCAKIFLPEQTWTSIS-- 1102

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
               +++      A V            +E+ L  KF    +L EA+TH    + G   YQ
Sbjct: 1103 ---DDMRTLYEVALVSNQASSHPKLGQMEEILGYKFNKPSILFEALTHPC-ANDGAPTYQ 1158

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN--------------------- 1666
            RLEF+GD++LDH + +  F     +    +  +R A VN                     
Sbjct: 1159 RLEFLGDSLLDHFVVQEFFNHPEKISHQDMHLMRTAVVNAHFLGFLCQSLYITEERSEPV 1218

Query: 1667 ---NENFARVAVKHKLHVH--LRHGSSALDRQIRDFVKEVLE--ELLKPGF-------NS 1712
                 + + ++ +HK+++   +RHG+S    +I +  +E     E   P         N 
Sbjct: 1219 SPGKAHISTISTEHKIYLWQLMRHGASW---EITNAQQETKARYEAWGPAVHDALMHSNK 1275

Query: 1713 FGLGD---CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLP 1764
            +   D     A K   D+VES+ GAIF+DS        Q  +     P L  ++  E L 
Sbjct: 1276 YPWADLFRINASKFFSDMVESLLGAIFVDSKGSLDASRQFLERISLLPCLRRIIREEVLI 1335

Query: 1765 MHPVRELQE 1773
            +HP  +L E
Sbjct: 1336 LHPFNQLHE 1344


>gi|225684422|gb|EEH22706.1| dicer [Paracoccidioides brasiliensis Pb03]
          Length = 1469

 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 160/328 (48%), Gaps = 47/328 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQL++ E+AK  N IA L+TG+GKTLIAVLL++ +      D  R     ++ FLV  
Sbjct: 99  REYQLELFEKAKTTNIIAVLDTGSGKTLIAVLLLKHMIRIELADRARGKPPRISFFLVDS 158

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQA V++      +  +CG +  D W  + W+R F    ++V TA++L   L HS
Sbjct: 159 VTLVYQQAAVLKANIDQSIDKFCGALQTDLWSKETWKRHFSKNMIIVCTAEVLYQCLLHS 218

Query: 421 IIKMEAINLLILDECHHAVKKHPYS-------------------LVMSEFY-HTTSKEKR 460
            I+ME INLLI DE HH  K HPY+                    ++ +FY   T  + R
Sbjct: 219 FIQMEQINLLIFDEAHHTKKDHPYARLEGSMFSAHSVSVADGIYRIVKDFYLQMTESQHR 278

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
           P +FGMTASPV+ K     VD    + +LE  LDS + T  +   L + V  P+E    Y
Sbjct: 279 PKIFGMTASPVDAK-----VDVVTAVKSLEMLLDSQIATASNLDALRQSVARPTEQEWVY 333

Query: 521 DKAASLW------SLHEQ------LKQMEVAVEEAAQSSSRR-SKWQFMGARDAGAKEEL 567
           D+    +      S+H Q      LK+M +   EA  +  R  S W +    D  +  +L
Sbjct: 334 DRLDPAFETDLYKSMHSQFGNISVLKKMFICSLEATSTLGRWCSDWLWTIVLDEPSLPKL 393

Query: 568 -----RQVYGVSERTESDGAANLIQKLR 590
                R+    S    + G   +I+ LR
Sbjct: 394 EGSISRRYIRTSSGNHTKGVDEMIKSLR 421



 Score =  150 bits (380), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 212/487 (43%), Gaps = 78/487 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL    EH      +GEE     YY+   PE   I  LP  +   A
Sbjct: 930  QPVVRAELVRLRRNLLDRTTEH------KGEET---AYYIC--PEPLRISALPAPVAVFA 978

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+++ R+ES L+A++  +K+   +     LEALT  S         Q  F       
Sbjct: 979  FTFPAMISRIESYLIALEACNKLQLTIIPELALEALTKDSDNTEEHRAEQIHFQRGMGKN 1038

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF       E      R  ++ N  L+  A+S G+  +++ 
Sbjct: 1039 YERLEFLGDCFLKMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRT 1098

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                     + + K  ++   N++           
Sbjct: 1099 QGFSRRNWYPEGI--------------------KLLQGKAKSETAENKHS---------- 1128

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGK--------DAANHLMKWIGIQVESDPEEV 1573
                    L+ K++AD+ EALIG   + GG+         A    +     QV      V
Sbjct: 1129 --------LADKSIADICEALIGASLLSGGRVHRFDTAVKAVTAFVNSGNHQVSDWQSYV 1180

Query: 1574 GCPSRPAC-VPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRL 1629
            G  S P   + E+    +D    + D L  +FK   LL  A THAS P+  S V CYQRL
Sbjct: 1181 GLYSLPRYQIAEADDTQLDLAQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVPCYQRL 1240

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GD++LD +  +HL+  Y +  P  LT+ + A V+N+    VAVK  LH HL + S A
Sbjct: 1241 EFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSKA 1300

Query: 1690 LDRQIRDFVKEVLEELLKPGFNS--FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            L  QI  + +E+     +   +S  F       PK L D++E+  GAIF+DS     VV 
Sbjct: 1301 LLGQITRYAEEIEATETE-SIDSPDFWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVVE 1359

Query: 1748 QVFQPLL 1754
              FQ  L
Sbjct: 1360 DFFQQCL 1366



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 120/292 (41%), Gaps = 61/292 (20%)

Query: 702 VTPKVQSLIKILLKY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
           ++PKV+ L   L KY  +HT D + I+FVE+  +A +L ++F+ L     +++  LIG  
Sbjct: 442 LSPKVRLLHHQLSKYFERHT-DTKCIVFVEKRHSATLLGELFS-LIGTRHMRTGVLIGVR 499

Query: 760 NSQ---EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
             +   E  +F+ Q  T+ KFR G +  L                               
Sbjct: 500 TDEAGGEKVSFRQQFWTLLKFRKGELNCL------------------------------- 528

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--ERTDLSHLKDTSR 871
                       Y  M+ER NL H   L  A+ +E  +R+  E++  +R       +  +
Sbjct: 529 ------------YAHMMERDNLIHQRCLEEAQEAENIMRQFCESLPEDRIIRGASDELDK 576

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
            +  +    T + V STG+ ++ NSA+ ++  Y S L  +     R  + +  H   G  
Sbjct: 577 FLYKERCRKT-FTVPSTGSKLTYNSALAVLAHYASSLQYENEMSTRVNYFI--HRIRGA- 632

Query: 932 TEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             + C++ LP  +P   L G    +   A+Q+     C  L + G   D  L
Sbjct: 633 --FVCEVVLPEKSPVRGLTGRPAVAKLSAKQSAAFETCLMLRKNGLLDDYFL 682


>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
 gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
          Length = 1431

 Score =  169 bits (429), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 170/677 (25%), Positives = 315/677 (46%), Gaps = 115/677 (16%)

Query: 299 MPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           +P  + R YQ ++L ++ ++NTI  +ETG+GKT IAVL I+    +L R + + L  FL 
Sbjct: 22  VPTIKPRAYQQEMLAESLRQNTIVAMETGSGKTQIAVLRIQ---EELSRCSPEKLVWFLT 78

Query: 359 PKVPLVYQQAEVIREQTG-YVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNI 416
           P V L  QQ  VI +Q   Y      G    D W  Q  W       +++V T Q+LL+ 
Sbjct: 79  PTVALAEQQYAVISKQIPLYQSRLLLGSDNVDHWSTQHIWDEILLNIRIVVSTPQVLLDA 138

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTASPVNLK 474
           + H  +K+  ++LL+ DE H  VK +P++ +M  ++H   +  ++ P++ G+TA+     
Sbjct: 139 MSHGFVKLSGLSLLVFDEAHRCVKANPFNGIMRLYHHARKSGADELPAILGLTAT----- 193

Query: 475 GVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
             +     A+KI  LE  L ++  T +  R+EL K+   P+ +VV Y +   L    + L
Sbjct: 194 PATKATAEAVKI--LEDNLHAICRTPVVQREELLKYTHKPALLVVTYSR--HLDETTKIL 249

Query: 534 KQMEVAVEEA--------------AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTES 579
           K ++V ++                A+    +SK   +   D+G     +++  +++RT  
Sbjct: 250 KDLDVILDLTLIDIENDPYVKSLRAKKDDEKSKGILLKILDSGKTFTRKEILSLAQRT-- 307

Query: 580 DGAANLIQKLRAINYALGELGQWCAY----KVAQSFLTALQNDERANYQLDVKFQES--- 632
                     R I+    ELG W A       A+ F+ A  + +R++  +  +++++   
Sbjct: 308 ----------RVID---EELGPWAAEVFVGTCAEKFIEA--SVKRSDNNIFRQWEDAEKI 352

Query: 633 YLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVI 692
           Y+ + +S+L                              I E  +  S            
Sbjct: 353 YMMRFLSMLPA----------------------------IAENRVWGS------------ 372

Query: 693 IGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKS 752
                +  +++ KV++LI  +    +  D R I+FVE+    ++L  + +  P    + +
Sbjct: 373 -----SPDQISQKVEALITTIASKYNPGD-RVIVFVEQRATVIMLAHLLSVHPLTKEIVT 426

Query: 753 ASLIGHNNS-------QEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIR 804
              +G++N         E+ T   Q + +A+ R G+  +L+AT+V EEG+D+  CN+VI 
Sbjct: 427 KYFLGNSNYANRKSAITELSTLSDQRDVLAELRVGKTNILIATNVLEEGIDVPACNMVIC 486

Query: 805 FDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLS 864
           FD  K + ++IQ RGRAR   S  +L +++ +      L      E  L++  I   ++ 
Sbjct: 487 FDPPKDLRSFIQRRGRARDRLSRLVLFMDKND---DDGLAKWAAMEHQLKE--IYADNMR 541

Query: 865 HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
            L++   L  ++     ++++ ST AV+S  +A   +  +C+   S  Y+  +PE+I++R
Sbjct: 542 ELEEIKALEDIEEESAEIFKIPSTEAVLSHQNAQPFLAHFCAT-GSSAYTSNQPEYIIDR 600

Query: 925 HEKPGGPTEYSCKLQLP 941
            E   G  + + K+ LP
Sbjct: 601 QEFAPGLAQIAAKVVLP 617



 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 214/532 (40%), Gaps = 115/532 (21%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTAA 1394
            P  +C I  +P    + A  +PSI  ++E + +A +L   +   V  S    +L A++A+
Sbjct: 912  PIRICHIDRMPAKFAKFALFIPSITHKIEVLFIAERLARTVLSRVGFSNLAHVLTAISAS 971

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            S  E   Y+R E LGD+ LK + S  L +  P  HEG L+  +  +VSN  LY+ AL+ G
Sbjct: 972  SAHEENDYQRYEFLGDSLLKLITSIHLVVNNPLWHEGMLSAAKDTIVSNGRLYRTALNLG 1031

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I    F   +W                  S   Q ++V E+K              
Sbjct: 1032 LDRFILTKSFTGRKW----------------RPSYVSQFETVGEEK-------------- 1061

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------W--IGIQ 1565
                         R LS+KTLADVVE+L+G  +++GG +      K       W  IG  
Sbjct: 1062 -------------RELSTKTLADVVESLLGAAFLDGGYEKLEACAKIVLPERAWSSIGDD 1108

Query: 1566 VESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC 1625
            V +  E      + A  P+          +E+ L  KF    +L EA+TH S  + G   
Sbjct: 1109 VRTLYEAALDSDQAAMHPK-------LGQMEEMLGYKFNKPSILFEALTHPSS-NDGAPT 1160

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------- 1666
            YQRLEF+GD++LDH + +  F     L    +  +R A VN                   
Sbjct: 1161 YQRLEFLGDSLLDHFVVQEFFNHPEKLSHQEMHLMRTAVVNAHFLGFLCQSLYITEQRTE 1220

Query: 1667 -----NENFARVAVKHKLHVH--LRHGSSALDRQIRDFVKEVLEELLKPGFNSF------ 1713
                   + + ++  HKL++   +RHG+S      +   K   E       ++       
Sbjct: 1221 PVSPGKAHLSTISTDHKLYLWQLMRHGASWEVMNAQQETKTRYEAWGSAVHDALNHSKTY 1280

Query: 1714 ---GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPM 1765
                L    A K   D+VESI GAIF+DS     V  Q  +     P L  ++  +   +
Sbjct: 1281 PWAALFRINASKFFSDMVESILGAIFVDSRGSMDVSRQFLERIGVLPCLRRIIREKVDCL 1340

Query: 1766 HPVRELQERCQQQAEGLEYKASRSGNLATVE------------VYIDGVQVG 1805
            HP   ++E  + +   +   A +   +   E            VYI  VQV 
Sbjct: 1341 HPFNHVREAAKSKKVEISSSAEKKAVIPESEGAATNPGAEGGLVYIGTVQVA 1392


>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
          Length = 1448

 Score =  169 bits (428), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 181/354 (51%), Gaps = 50/354 (14%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            V  +  L+ LTAAS  + F  ER E LGD++LK+ VS  LF+++P+  EGQLT ++ +++
Sbjct: 1033 VELADFLQVLTAASAHDIFNLERLETLGDSFLKYAVSLLLFIRFPELSEGQLTMIKGKVI 1092

Query: 1442 SNLVLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
             N  L+     KGL S I+A  F   S W APG     D   ++    L    + + E  
Sbjct: 1093 GNRNLFYCGEQKGLGSIIKAVEFNTESDWIAPGF--CVDRTVQNLFRELNINPRYLYEIP 1150

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSS-------------------------SYRVLSSKTL 1535
            L  D         ++E G+L   +                          S +V+S+KT+
Sbjct: 1151 LSRD---------EIECGKLSPRTKDIIEEKLEEWEEDLDYCNYSNAHFISQQVISNKTV 1201

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG--CPSRPACVPESVLR--SVD 1591
            +D VEAL+G+Y    G +    +++W+ +    DP+ +     ++    P  + +   +D
Sbjct: 1202 SDSVEALLGLYIQSYGLEKGFDMLRWLKV---IDPKLITPDVYTKKKVEPTILFKGGQID 1258

Query: 1592 FHA-----LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            FH      LE  +  KFK+R  L++A++H + +P++    YQRLEF+GDA+LD L+T H+
Sbjct: 1259 FHIHHPDYLEKLINYKFKNRAFLLQALSHPTYQPNNITPTYQRLEFLGDAILDFLVTTHM 1318

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            +    NL PG LTDLR+A VNN   A +AV+  LH  L   S  L + I  FV+
Sbjct: 1319 YEYCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLRSCQLSKVIEAFVE 1372



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 18/305 (5%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           V+ KV  L+++   ++ T+  +A+IFV R  +   L  +  +L  L  VKS  ++G+N +
Sbjct: 263 VSNKVLKLLELFKGFKETD--KALIFVTRRFSCKCLQYILEDL-KLPNVKSDFIVGYNTN 319

Query: 762 --QEMRTFQMQETIAK-----FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
              + R   +++ + K     F  G   +L+A+ V EEG+D++ CN VI+FD   T+ +Y
Sbjct: 320 PFNDTREGLLEKKVNKKVLKRFNGGDTNVLIASDVLEEGIDVQTCNTVIKFDPPTTMRSY 379

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI----ERTDLSHLKDTS 870
           IQS+GRAR   S + +M E  +      +      E  L+ E +    ER+  S  +  +
Sbjct: 380 IQSKGRARTRQSKFYIMTEAKDYKVEGKINKFERLETKLKHELVGKFLERSLPSEKELAN 439

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG- 929
            +      P   Y +   G  +  ++ + LI+ YC  L  DR+S L P +  E  +K G 
Sbjct: 440 SIFKTTIKP--FYPLGPDGPKIEGSTPIALINRYCMSLDCDRFSTLTPFWWKEVSKKNGF 497

Query: 930 GPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
                   LQLP ++P  + ++     ++ LA+++  L ACK L++     D +LP   +
Sbjct: 498 NENNIVVYLQLPISSPVRDVIKSDAFPNVELAKRSAALKACKLLYDSRELDDKMLPRGKT 557

Query: 989 GEQQE 993
            +Q E
Sbjct: 558 SQQLE 562



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 5/177 (2%)

Query: 279 NGINQECNGKVGKKSEAKEKMPEE-QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           + ++++  G  G   E +E + +E  AR YQ ++L  A + N I +L TG+GKT +A ++
Sbjct: 2   DDLDEDLAGLPGDTKEKEEVINDEFVARDYQDELLPLAVQNNCIIYLPTGSGKTFLATMI 61

Query: 338 IRSICNDLQRQNKK--MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW--DA 393
           I+    D++++  +    A FLV  V LV QQA+ I+ QT + VG Y G+ G D +  D 
Sbjct: 62  IKHFGADIEKKLSEGGKRAFFLVNTVQLVEQQAQSIKRQTTFTVGEYTGQTGCDLYSTDP 121

Query: 394 QRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSE 450
           Q+    F     +       +NI+  S I+   +  L ++E    +K   +++ M E
Sbjct: 122 QQEMVAFSPGTHMRSELCTSINIVLDSAIRNVTLFNLKMEEDFVPLKPSIHAIAMEE 178



 Score = 48.1 bits (113), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 11/122 (9%)

Query: 1259 TAESSFPRKEGYLGPLEYSSYADYYKQKYG-VELIFKKQ-PLIRGRGVSYCKNLLSPRFE 1316
            TA S FP  +       Y +Y  Y+  KY  VE ++  Q PL+  R +S   N L PR  
Sbjct: 785  TALSDFPSGD-------YPTYEKYFVTKYANVEKLYSAQKPLLEVRALSRRLNCLRPR-- 835

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD 1376
            HS +   + ++  ++ +   L PELC    +P +    A  LPS + R+ ++LLA +L+ 
Sbjct: 836  HSVQATSKRKKKQEEEFEESLVPELCVRCAVPAAYWLKATLLPSCVHRITALLLADELRV 895

Query: 1377 KI 1378
             I
Sbjct: 896  TI 897


>gi|226528435|ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
 gi|194705648|gb|ACF86908.1| unknown [Zea mays]
 gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer [Zea mays]
          Length = 329

 Score =  169 bits (428), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/254 (43%), Positives = 148/254 (58%), Gaps = 11/254 (4%)

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS--RPSSGVSCYQRLEFVGDAV 1636
            P  VP   + + D  A+E  L   F D+ L+  A+TH S   P+     Y+RLE++GD V
Sbjct: 37   PGEVPP--MSAKDVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGV 94

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            L  L+++ +F +Y  L PG LT LRAA V+ E  ARVAV   LH  LRH +  L  QI  
Sbjct: 95   LTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKLQDQICF 154

Query: 1697 FVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDP 1756
            F+    EE+ K   +S GL D   PKVL DIVES+ GAI+LDS  D   VW+VF+ L DP
Sbjct: 155  FI----EEMRKYPVHSNGLLD--PPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADP 208

Query: 1757 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVA-QNPQKKMA 1815
            ++  ETL  HPV EL E CQ+   G+++          V+V IDG  VG A   P+K++A
Sbjct: 209  LIGLETLGKHPVSELFEFCQKTHRGVKFLKDEWDKSLKVQVLIDGEVVGSAIYGPKKEIA 268

Query: 1816 QKLAARNALAVLKE 1829
            Q  AA++AL  LK+
Sbjct: 269  QNRAAKDALDKLKD 282


>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 1430

 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 139/233 (59%), Gaps = 10/233 (4%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           E + R YQ ++ E+A+K+N I  L TG+GKTLI +LLI+ + + L+    K++ +FLVP+
Sbjct: 13  ELRPRKYQEEIFERAQKENVITALNTGSGKTLIGLLLIKWM-SALESSGDKLI-IFLVPR 70

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV QQA+ +R+ T        G +     D  +W+++     V+VMT QIL+N + HS
Sbjct: 71  VALVEQQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHS 130

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQ 479
           I  +  I LL+ DECHHA K HPY+++M E+++    E RP +FGMTASPV N K     
Sbjct: 131 IWSLRQIALLVFDECHHARKNHPYNIIMQEYFYIKEVEDRPKIFGMTASPVWNTK----- 185

Query: 480 VDCAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHE 531
            D    +  LE+ LDSV+ ++++   EL  H P PSE++  +      +  H+
Sbjct: 186 -DPVGSLLTLETNLDSVIISVREHVDELAVHTPRPSELITIFPAPPDNYDFHD 237



 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 29/311 (9%)

Query: 703 TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNN- 760
           +PKV +L  ILL++ +T +F+ I+FVE+   A  L K+   +P L   ++SA L+G    
Sbjct: 358 SPKVDALKHILLEF-YTPNFQVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHLVGQGVN 416

Query: 761 ----SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
               S+   T+   + I  FR G V +L+ATSVAEEGLD   C++V+RFD  + ++ Y+Q
Sbjct: 417 SDGVSKATDTYH-GDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQ 475

Query: 817 SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLS------HLKD 868
           SRGRAR   S +I+MI + +     F +N    E  + K  +  +R  ++         +
Sbjct: 476 SRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRAAVTMPAQQEDEDE 535

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
              L  +D      Y V ST AV+S +SA+GL+++ C+ +P D Y+            KP
Sbjct: 536 EDDLNPLDLASRERYVVPSTEAVLSYDSAIGLLNYLCALIPCDAYT---------PPHKP 586

Query: 929 GGPTEYSCKLQLPCNAPFE----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
               ++   +QLP + P         GP+  S + A++AV   A K+LHE+  F   LLP
Sbjct: 587 KFTGDFQSTVQLPLSIPLPPDQLTYTGPLKCSKKEAKRAVSFLAVKRLHELDIFDQYLLP 646

Query: 985 DKGSGEQQEKV 995
             GS   +E++
Sbjct: 647 TPGSTLGEEEM 657



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 202/446 (45%), Gaps = 84/446 (18%)

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLG 1409
            ++R  + LP++  ++     A   +  I  P +P   ++EALT  +    F  +R E LG
Sbjct: 930  VIRAFEILPTLCHKITDAYRAQSTRLNIGLPFIPDDLLMEALTLPNVDADFSNQRLETLG 989

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRW 1469
            DA L    +  L  KYP++HEGQL+ +R   VSN  L   A +  L+ +I +++    +W
Sbjct: 990  DAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSNKFLVSCARTVELERFISSEKMGVEKW 1049

Query: 1470 AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV 1529
                                F ++K               YE  ++ D +     S  R 
Sbjct: 1050 P-------------------FVEQKG--------------YEAKEIRDRK-----SVKRQ 1071

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHL-----MKWIGIQV------ESDPEEVGCPSR 1578
            +  + L D VEAL+G  ++ GG   A        + + GIQ        ++  E+G P+ 
Sbjct: 1072 IPRRGLQDCVEALLGASFLAGGIPMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPAL 1131

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLD 1638
             A              LE  +   F++  LLVEA+TH S   S    YQRLEF+GD+V+ 
Sbjct: 1132 VA-------------GLEKEIGYVFENPELLVEAVTHPSLEFSSTPSYQRLEFLGDSVIK 1178

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH--LRHGSSALDRQIRD 1696
             L+T++LF  +      +L   R  A+ +   A +A++ K+H+H  L   S  L+  I  
Sbjct: 1179 MLVTEYLFHKFPKATSHQLALPRTKAICSPALAHIAIR-KIHIHKYLLQNSIDLNNAINL 1237

Query: 1697 FVKEVLE-----ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT----SVVW 1747
            +V  VLE     E+++ G+          PK + D  ES+ GA+F+D G D      +V 
Sbjct: 1238 YVP-VLESATADEIVRRGWRY------DPPKAISDAFESVVGAVFVDVGYDLDRTGGIVC 1290

Query: 1748 QVFQPLLDPMVTPETLPMHPVRELQE 1773
            ++ + +L+  V   ++P  PV E+ E
Sbjct: 1291 RLMEDILE--VLNPSIPKDPVSEVLE 1314


>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
          Length = 2002

 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 169/651 (25%), Positives = 279/651 (42%), Gaps = 145/651 (22%)

Query: 1274 LEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
            LE  +Y +Y+  K+ ++L+   + L+  R V+     L+   EH+ ++            
Sbjct: 1326 LETQTYEEYHYAKHDIKLVHPTKNLLECRNVTRHYAFLT---EHASKKLNRPP------- 1375

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI--------------- 1378
             +FL  E+  +HP+P SL   A  LPSI+ R+E+  L+ +L D +               
Sbjct: 1376 -MFLIGEIHQVHPMPSSLWSQATCLPSILWRIETFCLSNELTDNVYKGCNLKIDLLASHE 1434

Query: 1379 -NY--------------------PVPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
             NY                     +   + L ++T  SC E +  ER E LGD +LK+V 
Sbjct: 1435 SNYFNERTDNLMARLRRDLEYKGDIDWFETLHSITHKSCGEEYNLERLEFLGDRFLKFVS 1494

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK-GLQSYIQADRFAP-SRWAAPGVL 1475
            + + +   P KHEG L+R R +M+SN  L   +  +  L  YI   +  P S W  P  L
Sbjct: 1495 TLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEIELPRYILNKKVDPKSNWIPPCFL 1554

Query: 1476 P------------VFDEDTKDGDSSL----------------FDQEKSVAEDK------- 1500
                           D  +K+    L                 D+ K + + +       
Sbjct: 1555 STHTLNKISEAQNTVDSVSKEAREYLELLQNSTEDIEIPEGYIDEIKLLKKARPFLEVGH 1614

Query: 1501 -LGTDKNYNEYED------DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
             L +  NYN Y D      D +  G L+        + +K +AD +EAL+G+     G  
Sbjct: 1615 FLMSTSNYNSYSDALEKLCDIIPVGHLQE-------MGTKDVADSMEALLGLCVARYGYR 1667

Query: 1554 AANHLMKWIGI-----QVESDPEEVGC-------PSR-----PACVPESVLRSVDFHALE 1596
                L+  I +     Q E++P+++         PS+     P  +  +  R  +   +E
Sbjct: 1668 KGVDLLDRIKVTTFQAQSEAEPDDLNNHLYKQTPPSQISNLNPVAIRLARSRCDNLRTVE 1727

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
             A+  +FK+   L+EA+THAS      +CYQRLEF+GDAVLD L+   ++  +     G+
Sbjct: 1728 KAIGYEFKEPLYLLEALTHASFTEID-ACYQRLEFLGDAVLDVLMVFRIYEDHPEYDQGQ 1786

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG 1716
            +TDL ++ V N   ++V  K +LH  L + S+ L   +  F     ++ L+       L 
Sbjct: 1787 MTDLLSSLVCNTTLSKVCTKLQLHKSLLYDSAELFNVLAGFFMNFEKDQLEQWCKDLSLE 1846

Query: 1717 -------DC----------------KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
                   DC                +APK+LGD+VES+ GAI+LD   D   V++V  P 
Sbjct: 1847 RVFVDTVDCDTPDKIPILNLDNKVVQAPKLLGDLVESVIGAIYLDCDEDILRVYEVIWPW 1906

Query: 1754 LDPMVTP--ETLPMHP---VRELQERCQQQAEGLEYKASRSGNLATVEVYI 1799
             +P  T   + +P +P   + EL     +++  + Y      ++ATV + I
Sbjct: 1907 FEPFYTAFSKNVPKNPKAMINELYSGAIKKS-IVSYPGDHYRSIATVSISI 1956



 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 166/336 (49%), Gaps = 39/336 (11%)

Query: 701  KVTPKVQSLIKILLKYQH------TEDFRAIIFVER--VVAAL--VLPKVFAELPSLSFV 750
            +++ K   L+K +L+ QH      T+  R I+F++R  VV A+   L K+  E+   + +
Sbjct: 764  RMSVKFYELLKYILRLQHNSSENGTDAPRIIVFIQRRRVVIAMHKYLCKLRKEVEGCANI 823

Query: 751  KSASLIG-------HNNSQEMRTFQMQ--ETIAK--------FRDGRVTLLVATSVAEEG 793
            K+  ++G        ++  ++  F++   ETI K        FR+G+  +L+ATSV EEG
Sbjct: 824  KACYVLGGTTGSSKDDDESKLSDFEVDYLETIKKQQEQALIDFREGKHNILLATSVVEEG 883

Query: 794  LDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETL 853
            LDI  CN+VIR+D  +T  AY+QSRGRARK  + ++  ++    +    L  + +  E L
Sbjct: 884  LDIPACNIVIRYDFPQTYRAYVQSRGRARKKPAKFVFFMKETEKNEKMRLLGSFHDIEIL 943

Query: 854  RKEAIE----RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLP 909
             +E       R D     D         +P    +VE TGA V+ N A+  ++FYCSQLP
Sbjct: 944  LREYASDMSPRADHQEDDDDDEFNYNKLIPPL--EVEGTGAKVTANLAIQRLNFYCSQLP 1001

Query: 910  SDRYSILRP-EFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAA 968
             D Y+ + P ++ +E  +  G  T  +     P   P   +EG   S+ +LA+ +  +  
Sbjct: 1002 KDDYTDVMPSDYTIE--DARGFKTTITLPKLCPVKIP---IEGQYMSNKKLAKMSAAMKT 1056

Query: 969  CKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPL 1004
             + L+     TD LLP     E    + Q++ G  L
Sbjct: 1057 LEFLYSANELTDTLLPKFRQKEVNPLLIQSESGRSL 1092



 Score = 63.5 bits (153), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 28/170 (16%)

Query: 240 DFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVGKKSEAKEKM 299
           DF D     Y   D   +N       S E  +  A      ++  C      K +A EK+
Sbjct: 484 DFADVTHSTYTNLDDNPTNKTSL---SAECSYEEASSMLRKLDHGCLLPWTFKKDANEKL 540

Query: 300 PEEQA----RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ------- 348
            + Q     R YQ+++L +AKK+NTI  + TG GKT +AVLLI+   + +          
Sbjct: 541 NDVQTDFVPRDYQIEMLNRAKKENTIVMMPTGTGKTFVAVLLIKHFIHQVMTDPWRGPCA 600

Query: 349 -------------NKKM-LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCG 384
                        NK      FLV +V LV QQ  V+   TG  VG Y G
Sbjct: 601 ENSSCGNGKCSCGNKSWRRTFFLVNQVTLVSQQKRVLERHTGVAVGEYSG 650


>gi|242078881|ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
 gi|241940559|gb|EES13704.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
          Length = 291

 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/254 (43%), Positives = 146/254 (57%), Gaps = 11/254 (4%)

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR--PSSGVSCYQRLEFVGDAV 1636
            P  VP   + + D  A+E  L  +F D+ L+  A+TH S   P      Y+RLE++GD V
Sbjct: 16   PGEVPP--MSAEDVAAIEAVLGYEFADKSLVELALTHGSFYFPYRPGDTYERLEYLGDGV 73

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            L  L+++ +F +Y  LPPG LT LRAA V+ E  ARVAV   LH  LRH +  L  QI  
Sbjct: 74   LTCLMSREVFRNYRTLPPGPLTRLRAANVDTEKLARVAVDRGLHRFLRHKAPKLQDQICL 133

Query: 1697 FVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDP 1756
            F+    EE+ K   +S GL D   PKVL DIVES+ GAI+ DS  +   VW+VF+ L DP
Sbjct: 134  FI----EEMRKYPVHSNGLLD--PPKVLCDIVESLIGAIYWDSDFNQEEVWRVFRTLADP 187

Query: 1757 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQ-NPQKKMA 1815
            ++  ETL  HPV EL E CQ+   G+++          VEV IDG  V  A   P+K++A
Sbjct: 188  LIGLETLGKHPVTELFEFCQKTRRGVKFVKDEWDKSLKVEVLIDGELVASATYGPKKEIA 247

Query: 1816 QKLAARNALAVLKE 1829
            Q  AA+ AL  LKE
Sbjct: 248  QNRAAKAALDKLKE 261


>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
           bisporus H97]
          Length = 1717

 Score =  169 bits (427), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 139/233 (59%), Gaps = 10/233 (4%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           E + R YQ ++ E+A+K+N I  L TG+GKTLI +LLI+ + + L+    K++ +FLVP+
Sbjct: 13  ELRPRKYQEEIFERAQKENVITALNTGSGKTLIGLLLIKWM-SALESSGDKLI-IFLVPR 70

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV QQA+ +R+ T        G +     D  +W+++     V+VMT QIL+N + HS
Sbjct: 71  VALVEQQAKYLRDNTPLRTEKLYGALDISLSDRMQWKKKLGKCDVIVMTPQILVNFITHS 130

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQ 479
           I  +  I LL+ DECHHA K HPY+++M E+++    E RP +FGMTASPV N K     
Sbjct: 131 IWSLRQIALLVFDECHHARKNHPYNIIMQEYFYIKEVEDRPKIFGMTASPVWNTK----- 185

Query: 480 VDCAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHE 531
            D    +  LE+ LDSV+ ++++   EL  H P PSE++  +      +  H+
Sbjct: 186 -DPVGSLLTLETNLDSVIISVREHVDELAVHTPRPSELITIFPAPPDNYDFHD 237



 Score =  152 bits (385), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 32/355 (9%)

Query: 703  TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNN- 760
            +PKV +L +ILL++ +T +F+ I+FVE+   A  L K+   +P L   ++SA L+G    
Sbjct: 358  SPKVDALKRILLEF-YTPNFQVIVFVEQRQVAACLSKILPVIPGLEGKIRSAHLVGQGVN 416

Query: 761  ----SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
                S+   T+   + I  FR G V +L+ATSVAEEGLD   C++V+RFD  + ++ Y+Q
Sbjct: 417  SDGVSKATDTYH-GDAIQAFRKGEVNVLIATSVAEEGLDFPACDLVVRFDPFRHMVGYVQ 475

Query: 817  SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDLS------HLKD 868
            SRGRAR   S +I+MI + +     F +N    E  + K  +  +R  ++         +
Sbjct: 476  SRGRARNADSRFIVMIRQDDQVSFEFYQNLLAQEPEMNKAYQGRQRAAVTMPAQQEDEDE 535

Query: 869  TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
               L  +D      Y V ST AV+S +SA+GL+++ C+ +P D Y+            KP
Sbjct: 536  EEDLNPLDLASRERYVVPSTEAVLSYDSAIGLLNYLCALIPCDAYT---------PPHKP 586

Query: 929  GGPTEYSCKLQLPCNAPFE----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                ++   +QLP + P         GP+  S + A++AV   A K+LHE+  F   LLP
Sbjct: 587  KFTGDFQSTVQLPLSIPLPPDQLTYTGPLKCSKKEAKRAVAFLAVKRLHELDIFDQYLLP 646

Query: 985  DKGSGEQQEKVDQN---DEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTG 1036
              GS   +E++ Q     E    P        YP  + + L    I  G +  TG
Sbjct: 647  TPGSTLGEEEMAQTWLGLESRDTPTVMNVDVKYPWTIGEKLWLHPIYLGGEPVTG 701



 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 199/446 (44%), Gaps = 84/446 (18%)

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLG 1409
            ++RG + LP++  ++     A   +  I  P +P   ++EALT  +    F  +R E LG
Sbjct: 930  VIRGFEILPTLCHKITDAYRAQSTRLNIGLPFIPDDLLMEALTLPNVDADFSNQRLETLG 989

Query: 1410 DAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRW 1469
            DA L    +  L  KYP++HEGQL+ +R   VSN  L   A +  L+ +I +++    +W
Sbjct: 990  DAVLDICTTVHLMFKYPRRHEGQLSTLRAGRVSNKFLVSCARTVELERFISSEKMGVEKW 1049

Query: 1470 AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV 1529
              P V                                    E    E  E+    S  R 
Sbjct: 1050 --PFV------------------------------------EQKGYEVKEIRNRKSVKRQ 1071

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHL-----MKWIGIQV------ESDPEEVGCPSR 1578
            +  + L D VEAL+G  ++ GG   A        + + GIQ        ++  E+G P+ 
Sbjct: 1072 IPRRGLQDCVEALLGASFLAGGIPMALRTGVCFGLSFGGIQPWGERCRRAEAREIGVPAL 1131

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLD 1638
             A              LE  +   F++  LLVEA+TH S   S    YQRLEF+GD+V+ 
Sbjct: 1132 VA-------------GLEKEIGYVFENPELLVEAVTHPSLEFSSTPSYQRLEFLGDSVIK 1178

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH--LRHGSSALDRQIRD 1696
             L+T++L+  +      +L   R  A+ +   A +A++ KLH+H  L   S  L+  I  
Sbjct: 1179 MLVTEYLYHKFPKATSHQLALPRTKAICSPALAHIAIR-KLHIHKYLLQNSIDLNNAINL 1237

Query: 1697 FVKEVLE-----ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT----SVVW 1747
            +V  VLE     E+++ G+          PK + D  ES+ GA+F+D G D      +V 
Sbjct: 1238 YVP-VLESATADEIVRRGWRY------DPPKAISDAFESVVGAVFVDVGYDLDRTGGIVC 1290

Query: 1748 QVFQPLLDPMVTPETLPMHPVRELQE 1773
            ++ + +L+  V   ++P  PV E+ E
Sbjct: 1291 RLMEDILE--VLNPSIPKDPVSEVLE 1314


>gi|37266499|gb|AAQ90464.1| Dicer1 [Danio rerio]
          Length = 1243

 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 32/348 (9%)

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
            D+    +  D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V    ++ 
Sbjct: 892  DIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQS 951

Query: 1574 GCPSR----------PACVPE--SVLRSVD-----FHALEDALKIKFKDRGLLVEAITHA 1616
               S           P C+ E     R+++     F   E  +   FK++  L++A THA
Sbjct: 952  SGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHA 1011

Query: 1617 SRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
            S   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +AV
Sbjct: 1012 SYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAV 1071

Query: 1676 KHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKVLGD 1726
            K+  H + +  S  L   I DFV+  LE         EL +   +     D + PK +GD
Sbjct: 1072 KYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGD 1131

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEY 1784
            I ES+AGAI++DSG     VWQV+ P++ P++      +P  PVREL E   + A+    
Sbjct: 1132 IFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPA 1191

Query: 1785 KASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
            + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 1192 ERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 1237



 Score = 80.9 bits (198), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  ++ +LF  YP  HEG+L+ MR + VSN  L
Sbjct: 657  ILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNL 716

Query: 1447 YQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            Y+    KGL S +    F  P  W  PG   V ++D    D    D+ K +A  K
Sbjct: 717  YRLGKKKGLPSRMVVSIFDPPVNWLPPGY--VVNQDKSSTDKWDSDENKDLANGK 769



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 20/140 (14%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  +  ++T  S FP  E       Y ++A+YYK KY ++L    QPL+     S  
Sbjct: 308  RFYVADVYTDLTPLSKFPSPE-------YETFAEYYKTKYNLDLSNVNQPLLDVDHTSSR 360

Query: 1308 KNLLSPR----------FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR             +E+++ + E + +K   V   PELC IHP+P SL R A  
Sbjct: 361  LNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILV---PELCAIHPIPASLWRKAVC 417

Query: 1358 LPSIMRRVESMLLAIQLKDK 1377
            LPSI+ R+  +L A +L+ +
Sbjct: 418  LPSILYRLHCLLTAEELRSQ 437



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE-KLEG 951
           ++N+A+G ++ YC++LPSD ++ L P+         G    Y   L LP N+P    + G
Sbjct: 1   TMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGG----YRSTLFLPINSPLRVPVTG 56

Query: 952 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           PV +  RLA++AV L  C+KLH++G   D L+P
Sbjct: 57  PVMNCARLAEKAVALLCCEKLHKIGELDDHLMP 89



 Score = 50.8 bits (120), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            D+ K    + GL+++A+T  S  S G +  +RLE +GD+ L H IT +LF +Y +   GR
Sbjct: 645  DSPKTLGPNPGLILQALT-LSNASDGFN-LERLEMLGDSFLKHAITTYLFCTYPDAHEGR 702

Query: 1657 LTDLRAAAVNNENFARVAVKHKL 1679
            L+ +R+  V+N N  R+  K  L
Sbjct: 703  LSYMRSKKVSNCNLYRLGKKKGL 725



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 16/132 (12%)

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALT 1392
            ++ +PP   F HP        A+R  ++   +   L     + KINY     + +L+A T
Sbjct: 962  WLKIPPRCMFEHP-------DAER--TLNHLISGFL---NFESKINYTFKNKAYLLQAFT 1009

Query: 1393 AASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    
Sbjct: 1010 HASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASL 1069

Query: 1450 ALSKGLQSYIQA 1461
            A+      Y +A
Sbjct: 1070 AVKYDYHKYFKA 1081


>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1460

 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/225 (41%), Positives = 135/225 (60%), Gaps = 11/225 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A+  N IA L+TG+GKT I++LLI+ I   LQ + K+ + VFLVPKV LV
Sbjct: 18  RRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIKWIV--LQEKAKRKVIVFLVPKVALV 75

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQA+ I   T   V  + G +  D  D   W++ F+   V+VMTAQI LNIL HS   +
Sbjct: 76  KQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDVVVMTAQIFLNILTHSHWSV 135

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDCA 483
           E ++LLI DECHH  K H Y+ +M E++ T   + RP VFGMTASP+ N K      D  
Sbjct: 136 EKVSLLIFDECHHTRKNHAYNGIMHEYFQTIPSD-RPKVFGMTASPIWNPK------DAE 188

Query: 484 IKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
             +  LE  LD+ V  +++  +EL+++ P P EV+ E+   +  +
Sbjct: 189 GSLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDTY 233



 Score =  158 bits (400), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 41/337 (12%)

Query: 684 SGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE 743
           SG E   V I   +A    TPKV +L+++LL++ ++  F AI+FVE+   A  L K+   
Sbjct: 349 SGTEVPAVPIPVPLA--WCTPKVNALVEVLLEH-YSPTFHAIVFVEQRQVAACLAKILPC 405

Query: 744 LPSL-SFVKSASLIGH-----------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAE 791
           +P L  +V+ A L+GH           +N++ M   + Q+T+  FR G++ LLVATSVAE
Sbjct: 406 IPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLVATSVAE 465

Query: 792 EGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEE 851
           EGL    C++V+RFD  + ++ Y+QSRGRAR   S +++M ++ + +H         SE 
Sbjct: 466 EGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNAFLKSEP 525

Query: 852 TLR-----KEAIERTDLSHLKDTSRLISVDAVPGTV-----YQVESTGAVVSLNSAVGLI 901
            L+     +E    T L   +D+      +  P  V     Y V STGAV++ +SAV L+
Sbjct: 526 ELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRERYIVPSTGAVLTYDSAVNLL 585

Query: 902 HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK----LEGPVCSSM 957
           +  CS +P D Y+   P+        P    +Y+  L+LP + P         GP   S 
Sbjct: 586 NHLCSLIPHDAYT--PPQL-------PKYSGDYAVMLELPSSLPLPIDRLFFSGPERRSK 636

Query: 958 RLAQQAVCLAACKKLHEMGAFTDMLLP---DKGSGEQ 991
           R A++AV   A K+LH +  F D LLP    KG G +
Sbjct: 637 REAKRAVAFLAVKELHRLDVFDDYLLPATSSKGRGTE 673



 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 249/550 (45%), Gaps = 74/550 (13%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFP--RKEGYLGPLEYSSYADYYKQKYGVE----LI 1292
            ++ +   G+   + +IRY++T  S+ P   KE      EY +Y DY+ Q++  +     +
Sbjct: 824  VMNSNQYGRALVLRNIRYDLTPLSTTPPGSKES-----EYPTYRDYFVQRWTRKKREAFV 878

Query: 1293 FKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLV 1352
             +   LI    +  C + +    EH  + +    +I      + +P + C        + 
Sbjct: 879  PENSFLIEATYLPRCPSSVYRVREHLIDLDLCKRQIARAG--LLVPKDACRRVHFSEDVY 936

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDA 1411
            R    LP + RRV  +  A Q + ++  P+ A  +L EA T  +   TF  +R E LGD+
Sbjct: 937  RAFLLLPKLCRRVTDVYRARQERIELGLPMIAEDLLIEASTLPTTSLTFNNQRLETLGDS 996

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
             LK   +  +  KYP +HEGQL+ +RQ  VSN  L   A    L+ ++ ++      W  
Sbjct: 997  VLKLGSTVHIMNKYPHRHEGQLSHLRQNSVSNRTLLSRAKEIELERFLNSESHNLHFWRY 1056

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
               +P      +D DS+L    +S                              + R   
Sbjct: 1057 --TVP------EDTDSTLCRIRRS------------------------------TRREFP 1078

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSRPACVPESVLRSV 1590
             ++L D +EA +G  +V GG D A      +G+      P  +    RP   P   L   
Sbjct: 1079 RRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGGPIPWSLKYSRRPESSPAPHL--- 1135

Query: 1591 DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
             F  L+++L  +F    LLVEA TH S  +S  S YQRLEF+GDAV+D ++  +L+  + 
Sbjct: 1136 -FADLQESLCYEFHRGDLLVEAATHPSFATSASSSYQRLEFLGDAVIDLVVLNYLYRRFP 1194

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVK----HK-LHVHLRHGSSALDRQIRDFVKEVLEEL 1705
                G+L+  R+ AV     A ++V+    HK L V+    SSA++R +       +E++
Sbjct: 1195 QANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVEDI 1254

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD----TSVVWQVFQPLLDPMVTPE 1761
            +  G+          PK L D++ES+ GAIF+DS  +     SVV  +   +L+ +++P 
Sbjct: 1255 INKGWKY------DPPKALSDVLESVVGAIFVDSAYNFEKVASVVELIMSDVLE-LLSP- 1306

Query: 1762 TLPMHPVREL 1771
             LP  PV EL
Sbjct: 1307 NLPKDPVSEL 1316


>gi|393246311|gb|EJD53820.1| ribonuclease III [Auricularia delicata TFB-10046 SS5]
          Length = 1227

 Score =  168 bits (426), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 158/578 (27%), Positives = 260/578 (44%), Gaps = 56/578 (9%)

Query: 1203 GLVPDR--------EAMQIHNADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESI 1254
            GLVPDR        E    +   +P   L +A        L+ R    A   +RF   +I
Sbjct: 541  GLVPDRIPWDTEVQEGASGYITAVPQEMLSLASPALYGFVLQDRW---AEYTRRFRAVAI 597

Query: 1255 RYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKK---QPLIRGRGVSYCKNLL 1311
            R++M   S  P     +   +++S+ + Y  +        K   QPLI    +    N L
Sbjct: 598  RHDMNPSSRPPPNAAGV---QHASFLEQYVSRLRTPFAGLKNENQPLIEVARIPGLVNRL 654

Query: 1312 SPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLA 1371
             P            EEI    + +   PE+C    +P S    A  +P  +RR+E  LL 
Sbjct: 655  FP------ASRAISEEIDPPKFII---PEVCARFVIPASTFETAYLVPCCLRRIEDTLLV 705

Query: 1372 IQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
              L  +  +  +    +L A+++ S      Y+R ELLGD+ LK++ S  LF++ P   E
Sbjct: 706  KLLNHQFFDNEIEERLLLSAISSPSLCGDLDYQRLELLGDSVLKFLASAALFVRKPTSSE 765

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLF 1490
             +L   RQ + SN  L Q A   GL  +I    F+   W  P      + D     +   
Sbjct: 766  SELHLGRQNIFSNRALTQAARRAGLPPFILTKPFSIKSWIPP------NYDFDRAPAKPL 819

Query: 1491 DQEKSVAEDKLGTDKNYNEYED--DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
             +E ++  +K+   K   E E   D     + + D+S + +   KT+ADV EA++G  ++
Sbjct: 820  SEEDALIPEKVAAYKLAREREQKADAQARVKRQQDASEHWI-GEKTIADVTEAILGAAFL 878

Query: 1549 EGGKDAANHLMKWIGIQVESDPE-EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRG 1607
             GGK+      K + ++++   + +   P R        LR      +E  L    +   
Sbjct: 879  TGGKNLVLRAAKRLAVKLQDYVDVKANIPGR----SHVQLRCESLEHVERLLGRPIQRPH 934

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            L+ +A+TH+   SS  + YQRLEF+GDA+LD L+ +++ + Y  L P  LT L+AA V+N
Sbjct: 935  LVAQALTHSVIDSSLATSYQRLEFLGDAILDLLVVRYI-WRYEKLDPEALTLLKAAMVSN 993

Query: 1668 ENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV-----------LEELLKPGFNSFGLG 1716
               A V V+  LH H+ H S +L  +I ++VK +             E+ +P    + L 
Sbjct: 994  STLAAVCVQCGLHKHIIHASPSLGVKIDNYVKALHSARDKERALAQSEVRQP--VQYWL- 1050

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            + + PK L D++ES+ GA+F+      + +   F+ +L
Sbjct: 1051 ELEHPKPLSDLIESLLGALFISENYAIAPLEAFFENVL 1088



 Score = 41.2 bits (95), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 31/244 (12%)

Query: 888  TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
            TG V++L  A+G++    ++L +      RP+F  E       P   SC + +       
Sbjct: 299  TGGVINLKDAIGVVRRLAARLGAHNSHSARPKF--EFSTSTSSPLRVSCTVTISGCGSDL 356

Query: 948  KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDE--GEPLP 1005
             ++G    S + A++  CL  C +LH  G     L P K +      V  + +  GE   
Sbjct: 357  IIQGRPSGSEKEARRTACLELCIRLHRAGQLDYRLFPVKQTMNPPASVSTSSDPPGESDA 416

Query: 1006 GTA---RHR-----------EFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVN 1051
            G +   RHR           + YP  +A     E  +  R       L H  +  ++ ++
Sbjct: 417  GVSKYPRHRIGFWNHKAGDWQLYPSVIAVDGSDELGVPRRPMLL---LTHATLPALEPID 473

Query: 1052 NGISKDPFLTQVSDFAVLFSSELDAE-LASLKNFHVRLMSIVLD------VDVEPY-TTP 1103
                  P   +V    + F  +L++E L  L  + +R+   V +      ++  PY   P
Sbjct: 474  IYFDGHPATVRVHSSGLPF--QLESERLTLLHRYTIRIARAVSNKPMACALEQMPYFLAP 531

Query: 1104 WDPA 1107
            WDP+
Sbjct: 532  WDPS 535


>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
          Length = 1446

 Score =  167 bits (424), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 235/498 (47%), Gaps = 90/498 (18%)

Query: 1374 LKDKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
            +K+  N P P+ + IL ALT +S Q+    ER E+LGD++LK  V+  LF +     EG 
Sbjct: 995  IKEVENSPGPSPADILTALTPSSAQDVVNSERFEVLGDSFLKIAVTLHLFPREDLPDEGT 1054

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFD 1491
            LT  R +++SN+ L + A+ K +   +++  F A   +  PG++                
Sbjct: 1055 LTAERCRLISNMNLLKLAVPKKIHEAVESRIFSARESFRVPGMI---------------- 1098

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
                                         EG+    +V  SK  AD VEA+IGVY    G
Sbjct: 1099 ---------------------------SREGNKLQLQVYKSKICADSVEAMIGVYLERSG 1131

Query: 1552 KDAANHLMKWIG--------------IQVESDPEEVGCPSRPACVPESVLRSVDFHA-LE 1596
               A   ++++G                +  DP   G          S+ R  D  + +E
Sbjct: 1132 PIGALEFLRYLGLSLSDSDSGSFLSRFDLSYDPVVGGNHDYI-----SIRRHNDVMSRVE 1186

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
              L  +FK+R  L+EAITH S  +     Y+RLEF+GDAV+D+L++  +F +  +L PG+
Sbjct: 1187 SILGYRFKNRLYLLEAITHQSYNNRVTHSYERLEFLGDAVIDYLVSCFIFTNDPHLGPGQ 1246

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLG 1716
            LT +R+A V N  FA++  K  L   L H S  L R +  + + V  E+ +P  +SF +G
Sbjct: 1247 LTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLLFRMMTSYTEAV--EIGRPC-DSF-IG 1302

Query: 1717 D--------CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL---PM 1765
            D          APK  GD++ES+ GA+F+DS +D S  W VF+ L+   V  ETL   P 
Sbjct: 1303 DDETEDADLVDAPKPFGDLMESLIGAVFIDSNQDFSRTWDVFRGLMGDRVLLETLKDNPR 1362

Query: 1766 HPVRELQERCQQQAEGLEYKAS--RSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            +P+  L+E       G EY  +  R      + + + G     A + +KK+A+ L A+ A
Sbjct: 1363 NPIAVLEE---MFPSGCEYSKAIIREDKRIEMTLTVAGRNFS-AVSRKKKIAKLLLAKIA 1418

Query: 1824 LAVLKEKETAEAKEKGDE 1841
            L       + EAKE GD+
Sbjct: 1419 LRAF----STEAKEVGDK 1432



 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 8/233 (3%)

Query: 291 KKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK 350
           ++SE   K P   AR YQ+++L +A ++N I  L TG GKT ++VLLI+ +  + +    
Sbjct: 15  EESEHAGKFP---ARDYQIELLLKAVERNIIICLGTGTGKTFVSVLLIKELLYETRPDGG 71

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTA 410
              +VFL P VPLV QQA VI+      VG Y G    D W    W+RE +   VLVM  
Sbjct: 72  NRRSVFLAPTVPLVKQQAAVIKIHVDAEVGCYFGGDTVDNWQESEWRREIEKNNVLVMVP 131

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
           Q+  NIL  + I ++ INL++ DECH A  +  Y  +M   Y     EKRP + G+TAS 
Sbjct: 132 QVFSNILNQNFINLDQINLMVFDECHAATGQSCYVQIMQNHYVKMGPEKRPRILGLTASV 191

Query: 471 VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKA 523
           +N K  ++QV   I+   L S+LDS + T             P E++VEY ++
Sbjct: 192 LNKKVKTTQVRSEIR--GLCSRLDSTLATSMSAMNFGTK---PREMIVEYQES 239



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 161/346 (46%), Gaps = 34/346 (9%)

Query: 672 IEEGELLDSH-VVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHT-EDFRAIIFVE 729
           I EGE+ + + V+         I A   +  V PK++ L+ I   ++    +   ++F  
Sbjct: 321 IREGEMRNPYYVLCPDPGAADTIPADDLEFSVPPKLRRLLNIFETFRDCGRELCCVVFAR 380

Query: 730 RVVAALVLPKVFAELPS-----LSFVKSASLIGHNNS----QEMRTFQMQE--------- 771
                  L  V   L         F++   ++G  NS    +E +     +         
Sbjct: 381 ERYTVFALWCVLTTLSRKHPQRFGFIRPGFVMGAGNSSLKCEETKIVDFADEGFVENEGS 440

Query: 772 TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
           T+  FR G   +LVATSV EEG+D+ QCN+++R +      +Y+Q RGRAR   S Y ++
Sbjct: 441 TLENFRTGVHNVLVATSVIEEGVDVPQCNLIVRMNGDMNFRSYVQGRGRARAKPSIYAIL 500

Query: 832 IERGNLSHA-TFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG--TVY---QV 885
           +   + +   + + + + +E+ + +   E  D+  + ++   ++++  P   T+Y   + 
Sbjct: 501 VAATSAAKVNSDIGDFKVTEQIITRYCQEH-DMDVMCESDVELALEGDPDLPTIYANPED 559

Query: 886 ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG---GPTEYSCKLQLPC 942
               A+++  SA  ++ +YC  L +DR+ ++RP  ++  H +P       E  C + LP 
Sbjct: 560 PLNSAIITAQSARSVLQWYCDTLGNDRFQVMRP--LISYHSRPSKNQNEVESRCSILLPK 617

Query: 943 NAPF--EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
            +    E++ G    S   ++ +  LA CK+L+E+   T+ L+P K
Sbjct: 618 ASKLYPEEVYGKWLPSKPKSRVSAALATCKRLYELDELTENLVPRK 663



 Score = 53.9 bits (128), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 41/195 (21%)

Query: 1361 IMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--TFCYERAELLGDAYLKWVVS 1418
            +M RVES +L  + K+++        +LEA+T  S     T  YER E LGDA + ++VS
Sbjct: 1181 VMSRVES-ILGYRFKNRL-------YLLEAITHQSYNNRVTHSYERLEFLGDAVIDYLVS 1232

Query: 1419 RFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVF 1478
             F+F   P    GQLT +R  +V N    Q     GL   +        R     ++  +
Sbjct: 1233 CFIFTNDPHLGPGQLTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLLFR-----MMTSY 1287

Query: 1479 DEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADV 1538
             E  + G            +  +G         DD+ ED +L        V + K   D+
Sbjct: 1288 TEAVEIGRP---------CDSFIG---------DDETEDADL--------VDAPKPFGDL 1321

Query: 1539 VEALIGVYYVEGGKD 1553
            +E+LIG  +++  +D
Sbjct: 1322 MESLIGAVFIDSNQD 1336


>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
 gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
          Length = 1448

 Score =  167 bits (423), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 187/724 (25%), Positives = 325/724 (44%), Gaps = 106/724 (14%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-RQNKKMLAVFLVPKV 361
           Q R YQ +++E++ + N I  ++TG+GKT IA+   R+     Q  +  + +  FL P V
Sbjct: 61  QLRAYQAEMVEESMRANIIVVMDTGSGKTQIAIERTRAELETCQPDKPTRKIVWFLAPTV 120

Query: 362 PLVYQQAEVIREQT-GYVVGH--YCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNIL 417
            L  QQ EV      G+  GH   CG    +FW  QR W       +++V T Q+L   L
Sbjct: 121 SLCEQQHEVFMSNLPGF--GHQILCGRDDIEFWTTQRQWDSILTNVRIVVSTHQVLFEAL 178

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFY----HTTSKEKRPSVFGMTASPVNL 473
            H  + +  + LLI DE HH    HP + +M++FY    H  S    P V G+TASPV +
Sbjct: 179 THGFVTLTKLALLIFDEAHHCTLNHPANQLMTKFYMPQLHCNST-SLPKVLGLTASPV-M 236

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
           K V+++    +    +E  L +   T K  R EL ++V  P  V + Y  A      H  
Sbjct: 237 KAVATRQGLEL----IEQNLYATAKTPKLHRSELMRYVHQPELVQIAYPSAPP--GTHH- 289

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
             Q+ +A+++A Q+   +     +   D  +K      Y VS               R +
Sbjct: 290 -SQLLLALQDAYQTYDLQKDPYLIALLDQHSKG-----YDVS---------------RQL 328

Query: 593 NYALGELGQWCAYKVAQSFLTALQNDERANY-QLDVKFQESYLSKVVSLLQCELVEGAVS 651
           +        +C  ++ Q     L+N   A   +L     E YL + ++       E    
Sbjct: 329 DRLWSSRKTYCYDQLKQ-----LKNKAEAMADELGTSVMEFYLRQCIATF-----ENMTG 378

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG---KVTPKVQS 708
             D +++D         TNE +       H+++  + + +    +V DG    ++ KV  
Sbjct: 379 IFDQQLLDL-------STNERQ-------HLLNVFKSLPLNNPTSVPDGILDNLSQKVNI 424

Query: 709 LIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQEMRT 766
           L+  L+ + +   DF  ++FVE+ V    L ++    P +   ++  + +G + S + ++
Sbjct: 425 LVDTLVAEVEGNPDFTGLVFVEQRVWVASLAEILTCHPRTKHLLRVGTFVGTSKSSKRKS 484

Query: 767 F--------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                      Q T+  FR G + L++ATSV EEG+D+  C++VI F+  K + +++Q R
Sbjct: 485 NISVFAEPKNQQTTLDDFRAGIINLVLATSVLEEGIDVSSCHLVICFEQPKNLKSFVQRR 544

Query: 819 GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI----- 873
           GRAR+  S Y++           F+ + RN +     +++E       +D +R +     
Sbjct: 545 GRARRQRSRYLV-----------FVPDTRNVQSVKSWQSLEAEMRKAYEDDNRKVRLAQE 593

Query: 874 --SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
              VD       ++ESTGA+++L++A   +H +C++L S  Y+ + PEF           
Sbjct: 594 KEQVDEYGERYLRIESTGALLTLDNASQHLHHFCARLASGTYANMTPEFDFTHDHG---- 649

Query: 932 TEYSCKLQLPCNA-PFEKLEGPVCS--SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
            + + K+ LP +  P  +    + +  + R+AQ+     A K L+      D LLP +  
Sbjct: 650 -QITAKVTLPISVDPKVRTAKSLKTWVTERMAQKDAAFEAYKALYHAKLVNDNLLPVRDE 708

Query: 989 GEQQ 992
            E Q
Sbjct: 709 EEDQ 712



 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 188/440 (42%), Gaps = 93/440 (21%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI-----LEALTAASC 1396
            C +  LP          PSI+ ++E  ++A  L+  +  PV    +     + ALT+++ 
Sbjct: 948  CIVENLPIPYAIFGLLFPSIVHKLEVNIVAETLRTTLLKPVEVDNLHLPVLVTALTSSAT 1007

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
             E   Y+R E LGD  LK++ S  L     Q  EG LT  + ++VSN  L +  L+ GL 
Sbjct: 1008 NEGNDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVSNGYLARATLAAGLD 1067

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
             YI   RF  ++W    +  V  E T         QEKS                     
Sbjct: 1068 QYIFYKRFTGAKWKPRYISLVLAESTLPEK-----QEKS--------------------- 1101

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANH-------LMKWIGIQVESD 1569
                           SK +ADV+E+LIG  Y+ GG   A         L KW  +   ++
Sbjct: 1102 ---------------SKLIADVIESLIGASYIIGGFSKAFACVQTLLPLEKWTPL---AE 1143

Query: 1570 PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQR 1628
             +E+   + P    +  + S+    +E  L  KF ++ LL+EA+TH +      +C Y+R
Sbjct: 1144 AKEILYNAAPH---QDTVMSLGL--IEKLLGYKFNNKALLLEALTHVTFRGLNTNCSYER 1198

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------NENF 1670
             EF+GDAVLD+++++ L+     L   ++  +R A VN                  N+N 
Sbjct: 1199 HEFLGDAVLDYIVSRKLYAHKPELSHRKMHGIRTAMVNASFLAYSMFETTVTEELTNKNT 1258

Query: 1671 ARVAVKHK-LHVHLRHGSSAL----------DRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
                V  + L   LR  S+ L            + R+ +   L+   +  + +  L D  
Sbjct: 1259 LEPEVHQRALWQFLRCTSNELVASRIIATQQHAEARNRIATGLKHDSRFPWQALSLTD-- 1316

Query: 1720 APKVLGDIVESIAGAIFLDS 1739
             PK L DIVES+ GA+++DS
Sbjct: 1317 PPKYLSDIVESVIGALYIDS 1336



 Score = 55.1 bits (131), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 22/140 (15%)

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            +LV A+T  S  ++  + YQRLEF+GD +L  + + HL  +   +P G LT  +   V+N
Sbjct: 997  VLVTALT--SSATNEGNDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVSN 1054

Query: 1668 ENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAP------ 1721
               AR  +           ++ LD+ I  F K       KP + S  L +   P      
Sbjct: 1055 GYLARATL-----------AAGLDQYI--FYKRFTGAKWKPRYISLVLAESTLPEKQEKS 1101

Query: 1722 -KVLGDIVESIAGAIFLDSG 1740
             K++ D++ES+ GA ++  G
Sbjct: 1102 SKLIADVIESLIGASYIIGG 1121


>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
          Length = 1509

 Score =  167 bits (423), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 188/769 (24%), Positives = 327/769 (42%), Gaps = 125/769 (16%)

Query: 270 DHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAG 329
           + +R+ +E++ I  +   K G         P  + R YQL++LE + ++N I  ++TG+G
Sbjct: 13  ERHRSLEESDNILADSELKNGMLENGCRSPPVFKPRAYQLEMLEASLRENIIIAMDTGSG 72

Query: 330 KT--------------------LIAVLLIRSIC---NDLQRQNKKMLAVFLVPKVPLVYQ 366
           KT                    L  + + R+I    ++L+      L  FL P V L  Q
Sbjct: 73  KTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRIRHELETCAAHKLVWFLAPTVALADQ 132

Query: 367 QAEVIREQ-TGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSIIKM 424
           Q + I +Q + Y      G    ++W  +  W       +++V T Q+LL+ + H  + M
Sbjct: 133 QHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDILLNIRIVVSTPQVLLDAMTHGFVTM 192

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYH-----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
             I LL+ DE HH  +    +++M  FYH     T +    P + G+TASP+      ++
Sbjct: 193 SRIALLVFDEAHHCAENEAPNILMQRFYHEQLQRTGTANDLPHILGLTASPI------TK 246

Query: 480 VDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAAS-----LWSLHEQL 533
           VD    +  +E  L+S   T +  R+EL ++V  P    V +    S     L SLH  +
Sbjct: 247 VDPKY-LMKIEHNLNSRCETPRIHREELMRYVHRPELCTVNFQVDVSVGSDILQSLHRIV 305

Query: 534 KQMEVA----VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
           + +++     ++   Q   RRS+   + A         R+ + +S+ T+    A  I + 
Sbjct: 306 ETVDIEQDPWIKRLKQQKDRRSQNTLLNAMVK------RKTFAISQMTKLRRQATNIHE- 358

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
                    LG W A                          ++++S+V+  L      GA
Sbjct: 359 --------NLGAWAA--------------------------DAFISEVLKRL------GA 378

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK---VTPKV 706
             K+  +  D        GT E E+    ++ V      + +       D +   V+ K 
Sbjct: 379 --KRAKQSAD------HLGTLEREQ----ENFVFETLSQLPIYPSKQYWDSEPDLVSSKA 426

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSASLIGHN 759
             LI +L K +HT DF  IIF ++     +L  + ++ P L       +F+  A      
Sbjct: 427 NLLIDLLEK-EHTSDFTGIIFAQQRSTVTMLAHLISKHPRLKDLIVPGAFLGDAGYADRT 485

Query: 760 NS-QEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           ++  E+   + Q  +I   R G+  LLVATSV EEG+D+  C++V+ FD    + ++IQ 
Sbjct: 486 STITELHNTKTQRGSIDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQR 545

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA 877
           RGRARK  S +++ +   + S         +  +++ +E + R  L ++     +     
Sbjct: 546 RGRARKERSKFVIFLNGDDKSQEKKWNKMEDVMKSMYEEDMRR--LENIWAIENIEEEAD 603

Query: 878 VPGTVY-QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
                Y ++ESTGA+++  +A   +  +C+ L  D ++  RP F+    E PGG      
Sbjct: 604 EKENEYLRIESTGALLTFENARPHLEHFCATLQCD-FTDTRPVFLYSESE-PGGMVTGKV 661

Query: 937 KLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            L    +  F  + G       R+AQ+     A  KL+  G   D LLP
Sbjct: 662 ILPNVLDPKFRVIRGSKWWRRERMAQRDAAFQAYVKLYREGLVNDNLLP 710



 Score =  157 bits (396), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 192/444 (43%), Gaps = 84/444 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSIM +VE  L+A QL   I  PV     S ++ A++A+
Sbjct: 958  PARDCSIDKLPLEFSLFALLTPSIMHKVEIYLIAEQLNKTILKPVAFTDLSLVVTAISAS 1017

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  +  L       HEG L+R +  +VSN  L   A+  G
Sbjct: 1018 VAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETG 1077

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W                                     YN+   + 
Sbjct: 1078 LDKFILVDVFTGAKWRP----------------------------------RYNKVHLES 1103

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
             E G         R +++KTLADVVEAL+G   +EGG+      ++    ++   P +  
Sbjct: 1104 EEQG------IPQREMTTKTLADVVEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDR 1157

Query: 1575 CPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +    VPE+   +R+  F  +E  L   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1158 INALYNSVPEAYENIRTSWFQEIESLLGYSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFV 1217

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF S  NLP   +  +R A  N +  A + +                 
Sbjct: 1218 GDAILDHIIVHHLFNSSRNLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKK 1277

Query: 1676 ---------KHKLHVHLRHGSS-----------ALDRQIRDFVKEVLEELLKPGFNSFGL 1715
                     K  L  ++RHG+S              ++++  + E LE+     +    L
Sbjct: 1278 NTVTSLTTRKVFLWQYMRHGTSWELAAAQQQTADQYQKLQADISEALEK--SNTYPWTLL 1335

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDS 1739
               +A K   D++ES+ GAIF+DS
Sbjct: 1336 SRLRAQKFFSDLIESVLGAIFIDS 1359


>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
          Length = 1561

 Score =  167 bits (422), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 135/241 (56%), Gaps = 25/241 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI----CNDLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK +N IA L+TG+GKTLIA LL++ +      D      + +A FLV K
Sbjct: 139 REYQIELFERAKMRNIIAVLDTGSGKTLIAALLLQHVLQNEVEDRAAGKPRRIAFFLVDK 198

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V+    G+ V  +CG+M    W  + W ++F+  +V+V TA IL   L HS
Sbjct: 199 VSLVFQQHAVLECNLGHSVARFCGDMLDSMWSHEFWAQQFEENKVVVCTAAILQKCLAHS 258

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I+M+ INLLI DE HH  K HPY+ ++ ++Y      EKRP +FGMTASPV+     +Q
Sbjct: 259 YIRMDQINLLIFDEAHHTKKDHPYARIIKDYYIKEPDMEKRPKIFGMTASPVD-----AQ 313

Query: 480 VDCAIKICNLESKLDSVVCTI-KDRKELEKH-------------VPMPSEVVVEYDKAAS 525
            D  I    LE  L S + TI +D   L+ H             +PMP E  + Y K A 
Sbjct: 314 TDVKIAAARLEGLLHSEIATIPEDSTSLKAHARNIMEKDVFYGMLPMPFETEL-YRKVAG 372

Query: 526 L 526
           L
Sbjct: 373 L 373



 Score =  155 bits (392), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 160/602 (26%), Positives = 254/602 (42%), Gaps = 108/602 (17%)

Query: 1238 RIVTAAHSGKR-FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQK----YGVELI 1292
            ++VT  ++G R  Y+  +R +M      P  +G   P  + S+ D   +K    Y V L 
Sbjct: 925  KLVTDPYAGSRKLYLRGVRKDMKPLDMVP--DGVPDP-GHRSWRDANVEKNITEYSVSLW 981

Query: 1293 FKK---------QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCF 1343
             K          QP+I    VS  +NLL    E + E+         +  YV L P    
Sbjct: 982  AKSRKKFTWRQDQPVIEAEVVSLRRNLLDDFIETTTEES--------RICYVILQP--LR 1031

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------Q 1397
            +  LP   V  A   P+I+ R++S+++A+     +N  +     LEA+T  S       Q
Sbjct: 1032 VSTLPIETVVLAFAFPAIIHRMDSVMIALDACKHLNLTIRPDLALEAMTKDSDNNDEHDQ 1091

Query: 1398 ETFC--------YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            E           YER E LGD +LK   +  +F   P   E Q    R  ++ N  L+  
Sbjct: 1092 EKINFQSGMGKNYERLEFLGDCFLKMATTIAIFTSKPDDDEFQYHVQRMLLICNQNLFNK 1151

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+ +GLQ Y+++  F    W   G+                         KL   K    
Sbjct: 1152 AVDRGLQEYVRSQSFDRRSWYPQGL-------------------------KLMRGK---- 1182

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE-GGKDAANHLMKWIGIQVES 1568
                       +G  ++   L+ K++ADV EALIG  Y+     D  +  ++ +   V+ 
Sbjct: 1183 -----------QGQPANKHALADKSIADVCEALIGAAYLSYADSDNYDMAIRAVTAMVKE 1231

Query: 1569 DPEEVGC----------PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
                +            P      P  + R +    +E+++  KFK   LL  A  H S 
Sbjct: 1232 KTHRMTSWGDYVAGYRHPEWQFRKPTPIQRDMA-QQVEESMGYKFKSPALLRSAFHHPSY 1290

Query: 1619 PSSGVSC--YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
            P +  S   YQRLEF+GDA+LD +    LF  + N  P  LT+ + A V+N+  A ++VK
Sbjct: 1291 PRAYESLPDYQRLEFLGDALLDMVCVDFLFNKFPNADPQWLTEHKMAMVSNQFLASLSVK 1350

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEV------LEELLKPGFNS--FGLGDCKAPKVLGDIV 1728
              LH H+  G+SA+  Q  ++V  +       E   + G  S  + +    +PK L D++
Sbjct: 1351 LGLHKHILVGTSAMLSQKEEYVSSLNLAMAEAESGAESGMFSQDYWINVKHSPKYLSDVL 1410

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQAEGLE 1783
            E+  GA+F+DSG D + V + F   + P  T  +L       HPV  L    +++ +  E
Sbjct: 1411 EAYVGAVFVDSGYDYNEVRKFFDKHIRPFFTDMSLYDSFAKKHPVTRLSHLMEKEFKCTE 1470

Query: 1784 YK 1785
            Y+
Sbjct: 1471 YR 1472



 Score =  130 bits (327), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 13/277 (4%)

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVF-AELPSLSFVKSASLIGHNNSQEMRTFQMQE-- 771
           ++    D + I+FV+  + AL+L  +F  E   L F+ +  LIG            +E  
Sbjct: 472 RFSKPTDHKCIVFVDMRLTALLLTDLFRQEATKLPFLNAEFLIGSRPDSGAANMSFKEQV 531

Query: 772 -TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            TI+KFR G+V  L AT VAEEG+DI  C++VIRFDL ++ + YIQS+GRAR+  S+Y+ 
Sbjct: 532 LTISKFRHGKVNCLFATQVAEEGIDIPDCSIVIRFDLYRSAIQYIQSKGRARRAESEYLT 591

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAI---ERTDLSHLKDTSRLISVDAVPGTVYQVES 887
            IE GN  H   +  A+  + T+R+      E   +S +  T+  +  +A   T Y + S
Sbjct: 592 FIEGGNGRHTRTVAQAQCDQVTMRRFCTALPEDKKISGVDMTALFLHGEAQKKT-YVIAS 650

Query: 888 TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE 947
           TGA ++  S++ ++  + S L      +L PE+++    +     ++  ++QLP  +P +
Sbjct: 651 TGATLTWMSSLEVLSNFTSSLRQSNDEVLAPEYVVVNEGQ-----KFLAEVQLPPRSPIQ 705

Query: 948 KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            + G   S+ + A+ +     CK+L +     D L P
Sbjct: 706 TMAGNPHSTKQDARCSAAFEMCKELIKKKYIDDRLRP 742


>gi|195624966|gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
          Length = 329

 Score =  167 bits (422), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 148/254 (58%), Gaps = 11/254 (4%)

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS--RPSSGVSCYQRLEFVGDAV 1636
            P  VP   + + D  A+E  L   F D+ L+  A+TH S   P+     Y+RLE++GD V
Sbjct: 37   PGEVPP--MSAKDVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGV 94

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            L  L+++ +F +Y  L PG LT LRAA V+ E  ARVAV   L+  LRH +  L  QI  
Sbjct: 95   LTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLRHKAPKLQDQICF 154

Query: 1697 FVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDP 1756
            F+    EE+ K   +S GL D   PKVL DIVES+ GAI+LDS  D   VW+VF+ L DP
Sbjct: 155  FI----EEMRKYPVHSNGLLD--PPKVLCDIVESLIGAIYLDSNFDQEEVWRVFRTLADP 208

Query: 1757 MVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVA-QNPQKKMA 1815
            ++  ETL  HPV EL E CQ+   G+++          V+V IDG  VG A   P+K++A
Sbjct: 209  LIGLETLGKHPVSELFEFCQKTHRGVKFLKDEWDKSLKVQVLIDGEVVGSAIYGPKKEIA 268

Query: 1816 QKLAARNALAVLKE 1829
            Q  AA++AL  LK+
Sbjct: 269  QNRAAKDALDKLKD 282


>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
          Length = 1463

 Score =  167 bits (422), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 167/309 (54%), Gaps = 25/309 (8%)

Query: 703 TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNS 761
           +PKV+ LI IL  + +T  F+ I+FVE+   A  L  + + +P LS  +KS  LIGH  S
Sbjct: 360 SPKVRELIDILFGH-YTSTFQGIVFVEQRHVAACLATMLSRVPQLSHLIKSEQLIGHGAS 418

Query: 762 ----QEMRTFQM---QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                +M+   +   Q+ +  FR+ ++ LL+ATSVAEEGLD   C++VIRFD  + ++ Y
Sbjct: 419 TLAKSQMKGMALKTQQDIVKMFRERKINLLIATSVAEEGLDFPACDLVIRFDPLQHMVGY 478

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD---TSR 871
           +QSRGRAR   S +I+M+++G+  H    ++   SE  LR     R   +H  D     +
Sbjct: 479 LQSRGRARHRSSKFIIMVQQGHTVHTARYKSFSESEPQLRVVYQRRDIEAHFPDEEEEEQ 538

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
               D      Y V STGA+++ NSA+ L++  CS +P D+++   P  +      P   
Sbjct: 539 AHPADLAERERYVVPSTGAILTYNSAIALLNHLCSLIPHDKFT---PTHL------PRYT 589

Query: 932 TEYSCKLQLPCNAPFEKLE----GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
            ++S  LQLP + P  + +    GP   S + A++AV   A ++LH +G F D LLP + 
Sbjct: 590 GDFSSTLQLPMSLPLPQEDLTYVGPNRRSKKEAKRAVAFVAVQRLHLLGVFDDYLLPAQS 649

Query: 988 SGEQQEKVD 996
           +G      D
Sbjct: 650 NGASGADAD 658



 Score =  158 bits (400), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 128/218 (58%), Gaps = 11/218 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I+ LLI+ I    +    + + VFLVPKV LV
Sbjct: 15  RRYQEEIFARAQRGNVIAALDTGSGKTYISTLLIKWISA--RHIGLRKIIVFLVPKVALV 72

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ + I +QT   V   CG    D  D Q W++E D   VLVMTAQI LN+L HS   +
Sbjct: 73  DQQGDFIAKQTPLRVIKCCGATAVDLSDRQGWKKELDRADVLVMTAQIFLNLLTHSHWSL 132

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDCA 483
           + ++L++ DECHH  K H Y+ +M E++   +++ RP +FGMTASP+ N K      D  
Sbjct: 133 DKVSLMVFDECHHTRKNHAYNGIMREYFQCPTQD-RPKIFGMTASPIWNPK------DAV 185

Query: 484 IKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEY 520
             +  LE  LD+ V  ++    EL  H P P E++ EY
Sbjct: 186 ESLATLERNLDAKVIAVRQHVGELMDHSPKPQELLHEY 223



 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 166/626 (26%), Positives = 267/626 (42%), Gaps = 88/626 (14%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFP--RKEGYLGPLEYSSYADYYKQKYGVELI 1292
            L+  ++ +   G+ + +  IR +++  S+ P   +E       +S+Y +Y++ K+     
Sbjct: 802  LQTLVMCSREPGRPYLLRKIRTDISPLSTPPPGSREA-----AFSTYKEYWQDKFS---- 852

Query: 1293 FKKQPLIRGRGVSYCKNLLSPRFEHSE----EQEGEGEEILDKT--YYVFLPPELCFIHP 1346
             +K           C  L  P   H+        G+G +    T    V  P  LC    
Sbjct: 853  -RKGTTFEVPETGPCVEL-QPYLRHTSCVYSLDNGDGAQGAPMTVPLVVLFPLSLCRRAE 910

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERA 1405
            +   + R    LP +  R+  +  A   + ++  P     +L +ALT  S    F  +R 
Sbjct: 911  ISEDVFRAFHVLPELCHRITDVYRAHTARIELGLPPIVDDLLVQALTLPSANAGFNNQRL 970

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            E LGD+ LK     +LF KYP +HEGQL  +R+  VSN  L   A   GL+ Y+ ++  +
Sbjct: 971  ETLGDSVLKLATVVYLFNKYPHRHEGQLDVLRRNSVSNRTLLARAKEVGLEQYLSSEPQS 1030

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
               W            T   D  LF+  + V                             
Sbjct: 1031 VRLW----------RYTALPDRDLFEPYRYVP---------------------------- 1052

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSRPACVPE 1584
              RV   ++L D +EAL+G  +V GG   A      +G+      P       + A  P 
Sbjct: 1053 --RVFPRRSLQDCMEALLGAAFVAGGIPMALRAGTALGLSFGGPLPWNARYGGQIAESPV 1110

Query: 1585 SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKH 1644
            +VL    F  L+D L  +F+   LL+EA+TH S  ++  S YQRLEF+GDA++D  + ++
Sbjct: 1111 TVL----FTDLQDTLGYRFRCGKLLLEAVTHPSFGAAETSSYQRLEFLGDALIDLTVMRY 1166

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH-----KLHVHLRHGSSALDRQIRDFVK 1699
            L+  +     G+L+  R+ AV     A VAVK       L V+    S A+ + I     
Sbjct: 1167 LYNKFPEATSGQLSWARSRAVCAPALASVAVKRLGLQKLLLVNNVELSIAMGKCIPILES 1226

Query: 1700 EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG----RDTSVVWQVFQPLLD 1755
               EE++  G+          PK + D++ES+ GA+F+D      + +S+  QV   LL+
Sbjct: 1227 LSEEEIILSGWKQ------DPPKAMSDVLESVLGAVFVDLDFNFEKASSIAEQVLNDLLE 1280

Query: 1756 PMVTPETLPMHPVRELQERCQQQ-AEGLEYKASRS-----GNLATVEVYIDGVQVGVAQN 1809
             ++TPE LP  PV  L     Q     + Y+ S S      N +   V  +   VG    
Sbjct: 1281 -VLTPE-LPRDPVSNLMVWVAQAGCRRVTYRKSSSRPDVKRNDSISVVVHEHTLVGPLVA 1338

Query: 1810 PQKKMAQKLAARNALAVLKEKETAEA 1835
            P   +A+ LA+  ALA+L   E+ ++
Sbjct: 1339 PNLSLAKGLASERALAILSNPESPQS 1364


>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
            HHB-11173 SS5]
          Length = 1435

 Score =  166 bits (421), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 177/348 (50%), Gaps = 36/348 (10%)

Query: 703  TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHN-- 759
            TP+V +L + L+ + +   F+ I+FVE+   A+ L ++   LP L   V+ A L+GH   
Sbjct: 363  TPQVAALAETLISH-YKPTFQGIVFVEQRHIAVALARLLGRLPELRGRVRCADLVGHGGQ 421

Query: 760  ---NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
               N + M     Q+ +  FR G + LLVATSVAEEGLD   C++VIRFD  + ++ Y+Q
Sbjct: 422  TTANLKGMEIQGQQDVVRAFRRGEINLLVATSVAEEGLDFPACDLVIRFDPLQHMVGYLQ 481

Query: 817  SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLR-----KEAIER----TDLSHLK 867
            SRGRAR   S +++M+ RG+  H    R   +SE  ++     + A+E+    +D    +
Sbjct: 482  SRGRARHHTSTFVIMVPRGSEQHIMRYRTFADSEPQMKQIYQTQNALEQLSAESDTEEGE 541

Query: 868  DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
                    D      Y + ST AV++ +SA+G++   CS +P DRY+ +          +
Sbjct: 542  CEEPEHPEDLAERERYVIPSTLAVLTYHSAIGMLSHLCSLIPRDRYTPI---------HQ 592

Query: 928  PGGPTEYSCKLQLPCNAPFE----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
            P    E+   LQLP + P         GP+  S R A+ A    A +KLH++G F D LL
Sbjct: 593  PKYTGEFQVTLQLPSSLPLPPEDLTFVGPLKRSKREAKCAAAFMAVRKLHQLGVFDDYLL 652

Query: 984  PDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGR 1031
            P + S +      ++ +G P+P  +     YP+ +   +   W+L  R
Sbjct: 653  PVRRSNDTDA---EDPDGIPIPDISA----YPDMLRVAVHDPWVLGPR 693



 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 127/216 (58%), Gaps = 11/216 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I+ LL++ I +     +K  + +FLVPKVPLV
Sbjct: 16  RRYQEEIFVRAQEGNIIAALDTGSGKTFISTLLMKWIASKPAESSK--IIIFLVPKVPLV 73

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQA  I  QT   VG   G    D  D   W+R+F    V+VMTAQI LN++ HS   M
Sbjct: 74  EQQATFIERQTPLRVGQCYGANAWDLTDRGAWRRQFAASDVIVMTAQIFLNLITHSHWSM 133

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDCA 483
           + ++LL+ DECHH  K H Y+ +M E++       RP +FGMTASP+ N K      D A
Sbjct: 134 DRVSLLVFDECHHTRKNHAYNGIMREYFQCPG-HLRPKIFGMTASPIWNPK------DAA 186

Query: 484 IKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEVVV 518
             +  LE  +D+ V  +++ + EL   +P P EV+V
Sbjct: 187 TSLATLEKNMDAKVFAVREHESELLSIIPKPKEVLV 222



 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 166/672 (24%), Positives = 280/672 (41%), Gaps = 99/672 (14%)

Query: 1188 GIRGAIAQFDVVKASGLVPDREAMQ-IHNADMPTGKLMMADSCANAGDLEGRIVTAAHSG 1246
            G +  ++Q+ V   + L PD + M+ + N     G          +G L    +     G
Sbjct: 763  GPKQPLSQYLVALTNDLRPDWDTMERVVNHPWGHGDWTGISEAEWSGIL---CMNQREHG 819

Query: 1247 KRFYVESIRYEMTAESSFP--RKEGYLGPLEYSSYADYYKQKY---GVELIFKK-QPLIR 1300
            +   ++ +R+++T  S+ P   +E       + +Y +Y+  K+   G+ L+     PL  
Sbjct: 820  RALILQRMRHDITPLSTPPPGSRES-----THPTYREYFLHKWSRKGITLVIPDDTPLAE 874

Query: 1301 GRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGS--LVRGAQRL 1358
               V+   N   P   H    E   E +   +  + +P    F+  L  S  L R    L
Sbjct: 875  VCMVTRRTNSSYPL--HPAGTEFSPEPLFAASKSMVVP--FAFLRRLHMSAYLWRTFHLL 930

Query: 1359 PSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            P ++ RV  +    + K ++  P +P   ++EA T       F  +R E LGD+ LK  V
Sbjct: 931  PRLLHRVTDLYRVQRAKQELGLPPIPDDLLVEAYTLPHTGAGFSNQRLETLGDSVLKLCV 990

Query: 1418 SRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV 1477
               L  ++ ++HEGQL  +R+  V+N  L   A + GL SY+  +  +   W    V+P 
Sbjct: 991  IVHLLNRFRRRHEGQLDALRRNAVANRTLLARAHAIGLGSYLTCETMSVRTWR--HVVPE 1048

Query: 1478 FDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLAD 1537
                  D  S+ F     VA                              R +  + L D
Sbjct: 1049 EQHTPFDTTSARF-----VA------------------------------RSIPRRCLQD 1073

Query: 1538 VVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSRPACVPESVLRSVDFHALE 1596
             +EA +G  ++ GG   A      +G+ +    P  +    +P     + L    FH ++
Sbjct: 1074 CMEATLGAAFLGGGIPMALQAGTVLGMSLGGPVPWNLRYGRKPIGKTPAAL----FHRVQ 1129

Query: 1597 DALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            +AL   F +  LL+EA TH S  S     YQRLEF+GDA++D ++ ++L+  +    PG+
Sbjct: 1130 EALHYDFHNGDLLIEASTHPSFESGTFGSYQRLEFLGDALIDLVVMQYLYRKFPEGTPGQ 1189

Query: 1657 LTDLRAAAVNNENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGL 1715
            L+  R+ AV ++  A VAV   +L+  +   +S L+  +  ++         P    F  
Sbjct: 1190 LSWARSRAVCSQTMAWVAVTQLELNKIMLVNNSELNIALAKYI---------PILEDFSA 1240

Query: 1716 GDCKA-------PKVLGDIVESIAGAIFLDSG----RDTSVVWQVFQPLLDPMVTPETLP 1764
             D  A       PK L D++ESI GA+ LD+     R  +VV  V + +LD +     LP
Sbjct: 1241 EDIIAKSWKLDPPKALSDVLESIMGAVLLDTAYDYERSEAVVEWVMRDVLDALTL--DLP 1298

Query: 1765 MHPVRELQ-ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNP--------QKKMA 1815
              P+ +L     +     + +K ++S          DG+ V V   P           + 
Sbjct: 1299 PDPISQLMISTAKAGCRRINFKKTQSNPKVDRN---DGISVIVHDIPICGPIPGSSLSLC 1355

Query: 1816 QKLAARNALAVL 1827
            + LAA  AL +L
Sbjct: 1356 KALAAEQALGIL 1367


>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
 gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
          Length = 1509

 Score =  166 bits (421), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 188/769 (24%), Positives = 326/769 (42%), Gaps = 125/769 (16%)

Query: 270 DHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAG 329
           + +R+  E++ I  +   K G         P  + R YQL++LE + ++N I  ++TG+G
Sbjct: 13  ERHRSLVESDNILADSELKNGMLENGCRSTPVFKPRAYQLEMLEASLRENIIIAMDTGSG 72

Query: 330 KT--------------------LIAVLLIRSIC---NDLQRQNKKMLAVFLVPKVPLVYQ 366
           KT                    L  + + R+I    ++L+      L  FL P V L  Q
Sbjct: 73  KTQVVPTHELEIDAQVLNYFSDLTILWIFRAILRIRHELETCAAHKLVWFLAPTVALADQ 132

Query: 367 QAEVIREQ-TGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSIIKM 424
           Q + I +Q + Y      G    ++W  +  W       +++V T Q+LL+ + H  + M
Sbjct: 133 QHKSISQQLSAYQTRLLLGSDNVNYWSTKNIWDDILLNIRIVVSTPQVLLDAMTHGFVTM 192

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYH-----TTSKEKRPSVFGMTASPVNLKGVSSQ 479
             I LL+ DE HH  +    +++M  FYH     T +    P + G+TASP+      ++
Sbjct: 193 SRIALLVFDEAHHCAENEAPNILMQRFYHEQLQRTGTANDLPHILGLTASPI------TK 246

Query: 480 VDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAAS-----LWSLHEQL 533
           VD    +  +E  L+S   T +  R+EL ++V  P    V +    S     L SLH  +
Sbjct: 247 VDPKY-LMKIEHNLNSRCETPRIHREELMRYVHRPELCTVNFQVDVSVGSDILQSLHRIV 305

Query: 534 KQMEVA----VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
           + +++     ++   Q   RRS+   + A         R+ + +S+ T+    A  I + 
Sbjct: 306 ETVDIEQDPWIKRLKQQKDRRSQNTLLNAMVK------RKTFAISQMTKLRRQATNIHE- 358

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
                    LG W A                          ++++S+V+  L      GA
Sbjct: 359 --------NLGAWAA--------------------------DAFISEVLKRL------GA 378

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK---VTPKV 706
             K+  +  D        GT E E+    ++ V      + +       D +   V+ K 
Sbjct: 379 --KRAKQSAD------HLGTLEREQ----ENFVFETLSQLPIYPSKQYWDSEPDLVSSKA 426

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSASLIGHN 759
             LI +L K +HT DF  IIF ++     +L  + ++ P L       +F+  A      
Sbjct: 427 NLLIDLLEK-EHTSDFTGIIFAQQRSTVTMLAHLISKHPRLKDLIVPGAFLGDAGYADRT 485

Query: 760 NS-QEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           ++  E+   + Q  +I   R G+  LLVATSV EEG+D+  C++V+ FD    + ++IQ 
Sbjct: 486 STITELHNTKTQRGSIDDLRSGKKNLLVATSVLEEGIDVSACHLVVCFDAISNLRSFIQR 545

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA 877
           RGRARK  S +++ +   + S         +  +++ +E + R  L ++     +     
Sbjct: 546 RGRARKERSKFVIFLNGDDKSQEKKWNKMEDVMKSMYEEDMRR--LENIWAIENIEEEAD 603

Query: 878 VPGTVY-QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSC 936
                Y ++ESTGA+++  +A   +  +C+ L  D ++  RP F+    E PGG      
Sbjct: 604 EKENEYLRIESTGALLTFENARPHLEHFCATLQCD-FTDTRPVFLYSESE-PGGMVTGKV 661

Query: 937 KLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            L    +  F  + G       R+AQ+     A  KL+  G   D LLP
Sbjct: 662 ILPNVLDPKFRVIRGSKWWRRERMAQRDAAFQAYVKLYREGLVNDNLLP 710



 Score =  157 bits (397), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 192/444 (43%), Gaps = 84/444 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSIM +VE  L+A QL   I  PV     S ++ A++A+
Sbjct: 958  PARDCSIDKLPLEFSLFALLTPSIMHKVEIYLIAEQLNKTILKPVAFTDLSLVVTAISAS 1017

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  +  L       HEG L+R +  +VSN  L   A+  G
Sbjct: 1018 VAREATNYQRIEFLGDSILKFHTTLQLSAANLVWHEGLLSRAKDNVVSNKRLSYAAVETG 1077

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W                                     YN+   + 
Sbjct: 1078 LDKFILVDVFTGAKWRP----------------------------------RYNKVHLES 1103

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
             E G         R +++KTLADVVEAL+G   +EGG+      ++    ++   P +  
Sbjct: 1104 EEQG------IPQREMTTKTLADVVEALLGAATIEGGETKTEKCLEIFLPEIRWMPFDDR 1157

Query: 1575 CPSRPACVPESV--LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +    VPE+   +R+  F  +E  L   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1158 INALYNSVPEAYENIRTSWFQEIESLLGYSFNKKVFLVQAFTHPSNPGSTTSSYQRLEFV 1217

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF S  NLP   +  +R A  N +  A + +                 
Sbjct: 1218 GDAILDHIIVHHLFNSSRNLPHFDMHLMRTALANADFLAFLCIGMSTEQARSEVVESSKK 1277

Query: 1676 ---------KHKLHVHLRHGSS-----------ALDRQIRDFVKEVLEELLKPGFNSFGL 1715
                     K  L  ++RHG+S              ++++  + E LE+     +    L
Sbjct: 1278 NTVTSLTTRKVFLWQYMRHGTSWELAAAQQQTANQYQKLQADISEALEK--SNTYPWTLL 1335

Query: 1716 GDCKAPKVLGDIVESIAGAIFLDS 1739
               +A K   D++ES+ GAIF+DS
Sbjct: 1336 SRLRAQKFFSDLIESVLGAIFIDS 1359


>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
          Length = 1759

 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 163/312 (52%), Gaps = 37/312 (11%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP 1579
            +  K++AD VE+LIG Y    GK AA   M W+G++V          +++   + CP  P
Sbjct: 1428 IPDKSIADCVESLIGCYLTSCGKKAALKFMHWLGLKVLPQKKKGMVQDTELLSLQCPDSP 1487

Query: 1580 ACV--PE--SVLRSV--DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFV 1632
              V  P+  S+L  +   +  LE  +  +F+D+  L++A THAS   + V+ CYQRLEF+
Sbjct: 1488 LLVHVPDHNSILHRLLEGYDTLEQKIGYEFRDKSYLLQAFTHASYHYNTVTDCYQRLEFL 1547

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDR 1692
            GDA+LD++IT+HL+       PG LTDLR+A VNN  FA +AVK   H + +  S  L  
Sbjct: 1548 GDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKYFKAISPPLFG 1607

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGD------------CKAPKVLGDIVESIAGAIFLDSG 1740
             I  FV    E       +   L D             + PK LGDI ES+AGAI+LDS 
Sbjct: 1608 VIEKFVARQKERE-----DEIDLSDDEGEGEEEEHVELEVPKALGDIFESLAGAIYLDSK 1662

Query: 1741 RDTSVVWQVFQPLLDPMVTPE--TLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEV 1797
                 VW+V+  ++ P +     ++P  PVREL E   + A+  + + +  G +  TV V
Sbjct: 1663 MSLDTVWRVYYRIMKPQIDKYLLSIPKSPVRELLEMEPETAKFEKPERTLEGKIRVTVNV 1722

Query: 1798 YIDGVQVGVAQN 1809
               GV  GV +N
Sbjct: 1723 VTKGVFTGVGRN 1734



 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 137/540 (25%), Positives = 246/540 (45%), Gaps = 80/540 (14%)

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT--PKVQSLIKIL--L 714
            DS+NG  +G  +E+ +    DS V+S  E  D      V    V   P   +L K L  L
Sbjct: 403  DSQNGDSDGDESEMSD----DSVVMSDEETSDRAYKGNVLHIAVKREPDNGTLQKTLDPL 458

Query: 715  KYQHTEDFRAIIFVERVVAALVLPKVFAELPS----LSFVKSASLIGHN----NSQEMRT 766
                 +    I+FVE    AL + K   E+ S    L FVKS  L G       S++   
Sbjct: 459  NSDSEKYLCGIVFVEHRYVALAINKFLEEVCSWDENLCFVKSQHLTGQGLKDGKSKKGNW 518

Query: 767  FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
             + ++ + KFR   + LLV+T+V E+G+D+ +CN++++FD  ++  +Y QS+GRAR   S
Sbjct: 519  KKQEDVLRKFRLQDLNLLVSTTVLEDGIDVPKCNLIVKFDPPRSYKSYSQSKGRARARDS 578

Query: 827  DYILMIERGN----LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV 882
            +Y++++E       +      +   +     R E  +  + +H +DTS+++ +  +P + 
Sbjct: 579  EYLILVEENKKEMFMQDYNVFKGIEDVLVDRRNEEEDEEEDNHCEDTSKVL-LPYMPSS- 636

Query: 883  YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
               ++    V++ +A+  ++ YC++LPSD ++ L P+  ++     GG T Y   L LP 
Sbjct: 637  ---DNPHICVTVETAIAFVNRYCAKLPSDAFTHLTPKCTLQEISGEGG-TMYRATLNLPI 692

Query: 943  NAPFEK-LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-----------DKGSGE 990
            N+P+++ ++G V  +  LA++AV L  C+ LHE G   D L P            +    
Sbjct: 693  NSPYKRSVQGEVMPTKNLAKRAVALKLCQCLHEAGELDDQLNPVGKEVFTVEEEQEEEDA 752

Query: 991  QQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCV 1050
               +  ++  GE  PGT + +++Y + +A  L     +          L+++ +   K +
Sbjct: 753  ADGEEGEDYSGEGRPGTTKRKQYYFKRLAASL-----VQSHPSTEECLLYNISLQLSKAI 807

Query: 1051 NN-------------------GISKDPFLTQVSDFAV------------LFSSELDA--- 1076
            ++                   GI     + QV  F V            + SS       
Sbjct: 808  SDEQNTRGRKICAPEDTPRGFGILTSKRIPQVPTFPVYTRSGEVTASIDVLSSNFSVSSE 867

Query: 1077 ELASLKNFHVRLMSIVLDVDVEPYT-TPWDPAKAYLFVPVVSDKSVDPMNELDWDLVEKI 1135
            EL  L++FH    + VL ++ +P    P +    YL VP+  D   + +  LDW  ++++
Sbjct: 868  ELRRLRDFHRFTFTNVLRLEKDPMEFCPDESDLGYLIVPLNKDDDGNVV--LDWTFIKEV 925



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 19/142 (13%)

Query: 1247 KRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSY 1306
            + FYV  IR ++   S FP       P  Y +++ YY  KYG+ +   +QPL+     S 
Sbjct: 967  QHFYVAEIRSDLNPSSPFP------SPELYKTFSAYYTTKYGLTITNLEQPLLDVDHTSA 1020

Query: 1307 CKNLLSPRFEH----------SEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
              NLL+PR+ +          +E ++   E +  K   V   PELC IH  P SL R A 
Sbjct: 1021 RLNLLTPRYMNQKGVALPTSSAETKKARRENLQQKQILV---PELCEIHVFPASLWRKAV 1077

Query: 1357 RLPSIMRRVESMLLAIQLKDKI 1378
             LP+I+ R+  +L+A +++ +I
Sbjct: 1078 CLPTILYRLNYLLVADEIRMRI 1099



 Score = 60.8 bits (146), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 90/171 (52%), Gaps = 9/171 (5%)

Query: 308 QLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK--KMLAVFLVPKVPLVY 365
           Q+++L+ A ++NTI  L T  G T I+V+L++    +L++Q +     +V  +     + 
Sbjct: 35  QVELLDAALQRNTIVCLGTSGGNTFISVMLLKEFSTELRKQLQCGGKRSVVCLNSDESIQ 94

Query: 366 QQAEVIREQTGY-VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           + ++VI+  +   V+  Y  E+ +   D  +     +  Q+LV    +  +IL    +  
Sbjct: 95  EISQVIKHHSDLNVMPVY--ELSE---DESKLNSMLNDHQILVTKPSVFNDILLKKFLLP 149

Query: 425 EAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
             INL+IL+ CH  + ++HPY  +++  +++  KE    + G+T+S ++ K
Sbjct: 150 VQINLVILENCHLILHEEHPYQSIINIIHNSVRKEAAARILGLTSSFISQK 200



 Score = 50.1 bits (118), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 32/181 (17%)

Query: 1374 LKDKINYPV-PASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            L+ KI Y     S +L+A T AS      T CY+R E LGDA L +V++R L+    +  
Sbjct: 1509 LEQKIGYEFRDKSYLLQAFTHASYHYNTVTDCYQRLEFLGDAILDYVITRHLYEDSCKYS 1568

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
             G LT +R  +V+N +    A+      Y +A   +P  +   GV+              
Sbjct: 1569 PGVLTDLRSALVNNNIFAALAVKWDFHKYFKA--ISPPLF---GVI-------------- 1609

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
               EK VA  K   D      E D  +D     +     +   K L D+ E+L G  Y++
Sbjct: 1610 ---EKFVARQKERED------EIDLSDDEGEGEEEEHVELEVPKALGDIFESLAGAIYLD 1660

Query: 1550 G 1550
             
Sbjct: 1661 S 1661


>gi|449295521|gb|EMC91542.1| hypothetical protein BAUCODRAFT_570103 [Baudoinia compniacensis
           UAMH 10762]
          Length = 1569

 Score =  165 bits (418), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/221 (42%), Positives = 131/221 (59%), Gaps = 10/221 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQ---NKKMLAVFLVPK 360
           R YQ ++ ++A+K NTIA L+TG+GKTLIAVLL++ I + +L+R+    +  +A FLV  
Sbjct: 88  REYQWELFQRAQKSNTIAVLDTGSGKTLIAVLLLKWIIDVELERRATGEQPQIAFFLVAS 147

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LVYQQ  V+++   + V   CG  G D W   RW + F   +V+V TA +L   L HS
Sbjct: 148 VTLVYQQLAVLQQNLDHPVARVCGADGVDNWSKARWMKLFVENKVIVATADVLHACLAHS 207

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I M+ I+LLI DE HHA K H Y+ ++ +FY +  + +RP +FGMTASP++ K      
Sbjct: 208 FISMKQISLLIFDEAHHAKKNHAYARIVKDFYLSEDEGRRPRIFGMTASPIDAK-----T 262

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
           D       LES L S + T  D   +E  V  P E V +YD
Sbjct: 263 DVVQAASELESLLHSQIATTADMSLVEA-VKKPKEHVFQYD 302



 Score =  145 bits (366), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 30/298 (10%)

Query: 703 TPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAE--LPSLSFVKSASLIGHN 759
           +PKV  L + L  +++     R I+FVER   A +L   F    +P+L   +   L+G N
Sbjct: 440 SPKVLGLKRFLAPEFETPSSRRCIVFVERRHTARLLSATFKRFGVPNL---RPGFLVGAN 496

Query: 760 N---SQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
           N    ++  T  MQ  T+AKFR G +  L  T+VAEEGLDI  CN+VIRFD+ +T++ Y+
Sbjct: 497 NPEMDEDNFTTPMQVLTMAKFRSGEINCLFCTTVAEEGLDIPDCNLVIRFDMYRTMIQYV 556

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           QSRGRAR+  S ++ M+E+GN  HA  L   R  E  +R+          L +  RL   
Sbjct: 557 QSRGRARQRNSKFLHMVEKGNSVHAELLLQVRAQERAMRRFC------QLLPENRRLYGN 610

Query: 876 DAVPGTV---------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
           + +  T+         Y  ESTG  ++  +A+  +  + S +P+D   +L+P +I+  H 
Sbjct: 611 EGILETLMTKEKALRTYIEESTGTKLTYGNALVCLANFISSIPTDTDDMLQPTYIVNSHG 670

Query: 927 KPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           +     ++  ++ LP NAP     G VC+   LA+ +    AC++L       + L+P
Sbjct: 671 E-----KFVAEVLLPGNAPIRSAIGKVCTKKLLAKCSAAWEACRELRRKEYLDEHLMP 723



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 140/495 (28%), Positives = 199/495 (40%), Gaps = 101/495 (20%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++    +   +N+L+           E +E+  +T   FL PE   I  LP ++    
Sbjct: 973  QPVLEAVKILLRRNMLA---------TPEKKELTLRTK-AFLCPEPLRISALPPAVATSC 1022

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------- 1401
               P+I+ R+ES L+A++    I         L A+T  S        QE          
Sbjct: 1023 FAWPAIIHRLESYLIALEASKMIGVDCSPQMALAAMTKDSDNSGDHDKQEHINFQHGMGE 1082

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E +GD +LK   S   F++ P  +E +    R  M+ N  L+  A    L  Y++
Sbjct: 1083 NYERLEFIGDTFLKTATSISTFIQNPNDNEFEFHVKRMLMLCNQNLFNVAKELKLYEYVR 1142

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F+   W   G+         +G  +   +E SV +  LG                  
Sbjct: 1143 SIAFSRRLWYPEGL------KLLEGKGANKQEETSVIKHSLG------------------ 1178

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGGK---------------------DAANHLM 1559
                        KT+ADV EALIG  YV   +                     ++A+H M
Sbjct: 1179 -----------EKTIADVCEALIGAAYVTHDRPGDQWQPSHWENAVRAVTRLVNSADHTM 1227

Query: 1560 -KWIG-IQVESDPE----EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
              W   I     P     EV    R   + E V R   +H         FK   LL  A 
Sbjct: 1228 LTWSDYIAAYEKPSYQTGEVSASQRD--LAEKVEREHPYH---------FKYPRLLRSAF 1276

Query: 1614 THASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA 1671
             H S+P     V  YQRLEF+GDA+LD     +LF  Y +  P  LT+ + A V+N+   
Sbjct: 1277 IHPSQPVMYEKVPNYQRLEFLGDALLDMASIAYLFHRYPDRDPQWLTEHKMAMVSNKFLG 1336

Query: 1672 RVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG-FNSFGLGDCKAPKVLGDIVES 1730
             V V    H+HLRH S+ L  QI D+  E+LE     G    +       PK L DIVE+
Sbjct: 1337 AVCVNVGFHLHLRHSSAILQHQIADYAIELLETKRVAGDAKDYWTTVSDPPKCLPDIVEA 1396

Query: 1731 IAGAIFLDSGRDTSV 1745
              GA F+DS  D +V
Sbjct: 1397 YVGAAFIDSNFDYNV 1411


>gi|358253873|dbj|GAA53880.1| endoribonuclease Dicer [Clonorchis sinensis]
          Length = 2384

 Score =  165 bits (417), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 185/398 (46%), Gaps = 80/398 (20%)

Query: 1376 DKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
            +++  P PA+ +L+ALT +   +    ER E +GD++LK+V +  L+L YP  HEG+L+ 
Sbjct: 1732 ERVYRPGPAN-VLQALTMSCSNDFINLERMETIGDSFLKFVATVHLYLTYPNAHEGKLSH 1790

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDED--TKDGDSSLFDQ 1492
            MR ++V N  LY+   +K LQ  + A +F P   W  PG +   D    TK   +SL  Q
Sbjct: 1791 MRSRVVCNSNLYRLGRAKHLQDRMIACKFGPYENWVPPGYVVRHDPRLVTKADHNSL--Q 1848

Query: 1493 EKSVAEDKLGTDKNYNEYEDDDMEDGEL--------------------EGDSSSYRVLSS 1532
              +   +K   + N N +  D + D E+                    + D +S  V+ +
Sbjct: 1849 SPTRQSNK---EVNLNIWSTDTLMDDEVLLGMKVYTEEIKPIDNFAVSQWDPNSPEVVKT 1905

Query: 1533 -----------------KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---- 1571
                             K++AD VEALIG Y    G+ +A  LM+W GI     P+    
Sbjct: 1906 QKSVDHCLVTIQQAIPDKSIADCVEALIGCYLTARGERSALRLMRWFGIDCLPGPDVRLR 1965

Query: 1572 EVGCP--SRPACVP---------ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR-- 1618
              G P    P  +P         E    S  F  LE  L  KF+D  LL++A TH S   
Sbjct: 1966 PRGAPWAIPPPLIPLNDPRRAQLEEARLSWRFDELEAKLNYKFRDPTLLIQAFTHPSYHQ 2025

Query: 1619 ------------PSSGV-----SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
                        P S        CYQRLEF+GDAVLD++IT+ L+       PG LTDLR
Sbjct: 2026 LRKTLPVNPDDDPFSSTFLTDTDCYQRLEFLGDAVLDYVITRFLYEDSQQHSPGVLTDLR 2085

Query: 1662 AAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            +A VNN  FA ++V+  LH  LR  S  L   I  FV+
Sbjct: 2086 SALVNNNIFAALSVRAGLHQFLRASSPQLLHTIDVFVR 2123



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSE------EQEGEGEEILDK 1331
            ++A YY  KY   +   +QPL+         NLL PR+ +         +EG   +  D 
Sbjct: 1320 NFAAYYTNKYEATISSMEQPLLDVDFTVLRLNLLVPRYMNIRGHCLPCSKEGRKRDRRDN 1379

Query: 1332 -TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY 1380
             TY   L PELCFIHP P S+ R A  LPS++ R+ S+LLA +L+ +I Y
Sbjct: 1380 LTYKQILIPELCFIHPFPASVWRKAVCLPSVLYRMHSLLLAEELRRRIAY 1429



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 11/119 (9%)

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQER 1774
            D + PK LGDI ES+AGA+FLDS      VW VF PL+   +   T  +P  PVR+L E 
Sbjct: 2252 DVEIPKALGDIFESLAGALFLDSDLSLDTVWTVFYPLMKERIERYTACIPKSPVRQLLE- 2310

Query: 1775 CQQQAEGLEYKASR---SGNLAT-VEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
               + EG +++  R    G ++    V   G   G+ +N   ++A+ LAA+ AL VL++
Sbjct: 2311 --LEPEGTKFERPRRTADGRISVCAHVLGKGRFYGIGRN--YRLAKSLAAKRALRVLRK 2365



 Score = 61.2 bits (147), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 57/275 (20%)

Query: 758 HNNSQEMRTFQMQETIAKFRDGRVTLLVAT----SVAEEGLDIRQCNVVIRFDLAKTVLA 813
           H   Q       +ETI+KFR G + LL+AT    S A  G ++ +CN+V+     +++  
Sbjct: 682 HGCEQSTLPATQEETISKFRRGSINLLIATQPAVSAAAGGAELPRCNLVVALQPPRSLAE 741

Query: 814 YIQSRGRAR--KPGSDYILMIER------------------GNLSHAT--------FLRN 845
           Y+ S+ R+R    G+  + ++E                   G LSH           L  
Sbjct: 742 YLSSKARSRLVDHGAQVVYLVESYQSDNCGATASVSPDDFGGGLSHTEQKGGESTGILAR 801

Query: 846 ARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYC 905
            +  E+ L +        +   D    ++   +P  +      G  + L+ A+ +I+ YC
Sbjct: 802 FQKLEQLLVRNCRSYDLFADEHDVDPSVADRLIP-PIMPRGPNGPKLLLSKAINVINQYC 860

Query: 906 SQLPSDRYSILRPEFIMERHEKP-------GGPTE----------------YSCKLQLPC 942
           ++LPSD  + L P + ++   +P        GP                  + C L+LP 
Sbjct: 861 ARLPSDYITNLTPRWRLKSLPQPQTWKPPVQGPGASCGARGEVEAVRKRGLFQCLLRLPI 920

Query: 943 NAPFE-KLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
           N   + ++ G   +  +LA+ +  L A + LH  G
Sbjct: 921 NTSVKMEIAGEPMACKKLAKLSAALNAVRALHAAG 955



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 12/146 (8%)

Query: 306 PYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVY 365
           PYQLD+L+ A ++NTI  L     K+ I + LIR +  D     K+ L  F   K   + 
Sbjct: 28  PYQLDLLDTAYERNTIICLSNELTKSFITLSLIREMGYD--HLGKRAL-YFTQEKN--II 82

Query: 366 QQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS----- 420
           + A  +   TG  V H+  +     W    W +E     V VM+  ++  +L  S     
Sbjct: 83  ETAHCLARHTGLSVVHFQYKEPFIGWRFSDWTKELSRHHVTVMSPWLIPCVLSGSSPDEF 142

Query: 421 -IIKMEAINLLILDECHHAV-KKHPY 444
            +  +E   LL + ECHH +   HPY
Sbjct: 143 QVFLLENFYLLAVSECHHVLDPAHPY 168


>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1402

 Score =  164 bits (416), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 178/649 (27%), Positives = 284/649 (43%), Gaps = 111/649 (17%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           +R YQL++L ++ K N I  ++TG+GKT IA+L IR+    L+  + + +  FL P V L
Sbjct: 27  SRAYQLEMLRRSLKDNVIVAMDTGSGKTQIAILRIRA---QLESTSDQKVIWFLAPTVLL 83

Query: 364 VYQQAEVIR-EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQ + I+ E     +    G      W +  W+   +  Q +V T Q+LL+ L H+ +
Sbjct: 84  CAQQFDAIKLEIPSISMRLVVGSDNVHTWSSSTWKSLLNGTQAVVSTYQVLLDALDHAFV 143

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYH-------TTSKEKRPSVFGMTASP---VN 472
           K++ ++LLI DE H+ V  +P   +M  FYH             RP++ G+TA+P    +
Sbjct: 144 KLDRLSLLIFDEAHNCVGSNPGGKIMKHFYHYQGLRQDADDGSNRPAILGLTATPSMKAH 203

Query: 473 LKGVSSQVDCAIKICNLESKLDSV-VCTIKDRKELEKHVPMPSEVVVEYDKAA------S 525
           +KGV            LE  L+++ V     R+EL KHV  P   ++E + AA      +
Sbjct: 204 IKGVE----------KLEQVLNAICVSPSLHREELLKHVKRPQLRIIECETAATEHFTET 253

Query: 526 LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTES-DGAAN 584
           + SLH++  +M++  +    S             D  +K  L +V  + E+T S    ++
Sbjct: 254 MSSLHQECAKMDILEDPYVVS--------LCAQNDDRSKRCLAKVL-IDEKTWSRHQLSS 304

Query: 585 LIQKLRAINYALGELGQWCA----YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSL 640
           L+ + R I   LG    W A    +K  +SF   LQN +     LD    E  L  V  +
Sbjct: 305 LLSRSRIIRQLLGP---WAADFYIWKAKRSF---LQNVKSTVPSLDGWVPEEKL-YVARI 357

Query: 641 LQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG 700
           LQ                                        V+  E     IG      
Sbjct: 358 LQ---------------------------------------DVAALEPAPRPIGYDSISD 378

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIG-- 757
           KV   ++ LI       H  D   IIFV+    A VL  +   +P +    +   ++G  
Sbjct: 379 KVGLLLRELI------MHKGDVTGIIFVQERATAAVLAALLHSIPKIRERYRVGCMVGTS 432

Query: 758 HNNSQEMRTFQMQE-----TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
           HN+ ++   +++ +     T+  FR G V LLVATSV EEG+DI  CN+VI FD  K   
Sbjct: 433 HNHLRKASLYEVLDSSDCKTLQDFRRGEVNLLVATSVLEEGIDIPACNLVICFDSPKNPK 492

Query: 813 AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL 872
           ++IQ RGRAR   S  I+   +G+     +       ++  +    ER  L  L+     
Sbjct: 493 SFIQRRGRARMQDSQLIIFTHQGHSLTDHWAIFEDEIQKLCQDSERERQQLQTLE----- 547

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFI 921
             +D      ++V  TGA +   +A   +  +C  + S  Y+  RP++I
Sbjct: 548 -RLDEDVDFCFRVPHTGARLDPENAKQHLEHFCRVISSQEYTDGRPDYI 595



 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 156/579 (26%), Positives = 240/579 (41%), Gaps = 107/579 (18%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H    + E +    K Y   LP     +  +     R    +PSI+  +E+ML+A  L
Sbjct: 872  FLHLIAVDPETQRASQKQYITVLPVSFATVDSIHIKHARFGMLIPSIIHTIETMLIARHL 931

Query: 1375 KDKINYPVPA---SKILEALTAASCQETFCYERAELLGDAYLKWVVSR---FLFLKYPQK 1428
               +  P+     S + +A++A S  E   YER E LGD+ LK+  S       L +P  
Sbjct: 932  SVTLLKPLELTDYSLVRDAISARSAYEPTNYERLEFLGDSILKFCASMQAGATNLSWP-- 989

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSS 1488
             EG LTR + ++V+N  L + A+  GL  +I    F   +W      P F E    G   
Sbjct: 990  -EGYLTRYKDRLVANSRLSRAAVETGLAKFILTVPFTAQKWH-----PFFLETILSGKMK 1043

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
             F +                                   R +S+K LADVVEAL+GV Y+
Sbjct: 1044 PFKK-----------------------------------REMSTKVLADVVEALVGVAYI 1068

Query: 1549 EGGKDAANHLMK-------WIGIQVESDPEEVGCPSRP-ACVPESVLRSVDFHALEDALK 1600
             GG   A   +        WI      DP E  C     AC P   + S   H LE+ + 
Sbjct: 1069 AGGIPKAIQCLSIFINECDWI------DPSE--CREEFFACAPSHCVDSSYLHILEELIG 1120

Query: 1601 IKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
              F  + LL+EA THAS     SG S ++RLEF+GDAVLD++I   L      LP  R+ 
Sbjct: 1121 YSFTKKSLLLEATTHASYIGDISGRS-WERLEFLGDAVLDYMIVSKLMNRSPPLPHSRMH 1179

Query: 1659 DLRAAAVNNENFARVAV-----------------------KHKLHVHLRHGSSALD---- 1691
             ++ A VN +  A +++                       +  L   +RH SS +     
Sbjct: 1180 MIKTAMVNKDFLAFLSLEEHELSQTESFVTEDGVVLTTNKRSALWRFIRHSSSGIGPAQL 1239

Query: 1692 ---RQIRDFVKEVLEELLKPGFNSFG-LGDCKAPKVLGDIVESIAGAIFLDSGR----DT 1743
               ++  +   E+L EL       +  L   +A K   D+ E++ GAI++DSG     D 
Sbjct: 1240 ETAKRHENLRLEILHELHHGTHYPWHILLKQQASKFYSDLFEALVGAIWVDSGSLATCDA 1299

Query: 1744 SVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV---EVYID 1800
             +      P L+ ++       HP  EL    Q +++  E +  + G+  T     + I 
Sbjct: 1300 FLRRIGMLPYLERVLADSLHMQHPKEELGGLAQARSQLYEVEEVKGGDGRTTYNCRLLIG 1359

Query: 1801 GVQVGVAQNPQKKMAQKL-AARNALAVLKEKETAEAKEK 1838
            GV+VG     Q     ++ AA   +A LK +   +++++
Sbjct: 1360 GVEVGAELGGQTAEEARVGAATKGVAHLKAEAAMQSQDR 1398


>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
          Length = 1418

 Score =  164 bits (416), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 247/561 (44%), Gaps = 72/561 (12%)

Query: 1280 ADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPP 1339
            AD +  KY   L    + +     V  C+ + S       +   +   IL  T  VF+P 
Sbjct: 824  ADAHLAKYVASLAKFGRTISEDDTVLQCRPIFSITSTEFRDPARQKPGILSDTD-VFIPQ 882

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQE 1398
             +C    L    +R    LP +   + S+  A  L  ++  P +   + +EALT      
Sbjct: 883  SVCQWLNLDEDRLRWFSSLPPLFHLLSSVYRARLLHSRLGVPELDLDRTIEALTIPQACA 942

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
            +F  +R E LGD++LK   +  +  K+P KHEGQLT +RQ  V N  L     ++ L S+
Sbjct: 943  SFNNQRLETLGDSFLKVATTIHVLNKFPHKHEGQLTSLRQNSVCNRYLLGRGHAQNLVSF 1002

Query: 1459 IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
            +  +  + SRW    + PV         S+ +   +S  E                    
Sbjct: 1003 MNIEPNSQSRWR---ITPV---------STKYINSRSFVE-------------------- 1030

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
                     RV+  +++ D +EAL+GV ++ GG  A   +   +G+        V    R
Sbjct: 1031 ---------RVIPRRSVQDCMEALLGVAWLSGGDKAGLRVGTRLGLCFGG---TVPWAER 1078

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLD 1638
               V  +   S  F  LE+ L   FKD+ LLVEA+TH S   SG + YQRLEF+GDAVLD
Sbjct: 1079 YPKVELAFSSSSPFPPLEENLGYTFKDKSLLVEALTHPSF-VSGSASYQRLEFLGDAVLD 1137

Query: 1639 HLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL------DR 1692
             +  +H F  Y N   G+LT  RA  V N   + +  K KL +H      A+      ++
Sbjct: 1138 LVTVEHFFHLYPNATSGKLTRARARCVCNSTLSALGTK-KLEIHKAMFCDAISLVAAANK 1196

Query: 1693 QIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS----VVWQ 1748
              R F      +++        +    APK LGD+VE++ GA+F+DSG + +    VV +
Sbjct: 1197 TARMFNSMDFTQVID------NIWRLDAPKALGDMVEALIGAVFVDSGWNYNIVKDVVIR 1250

Query: 1749 VFQPLLDPMVTPETLPMHPVRELQERCQQQ--AEGLEYKASRSGNLAT----VEVYIDGV 1802
            +F+ +LD  + P+ +P+ P  E      +    +    KAS S  +      V V I G+
Sbjct: 1251 LFKEVLD-YIHPD-MPLDPTSEFMIWVAKHGCTQARYRKASSSEKVEPWKDQVFVTIHGI 1308

Query: 1803 QVGVAQNPQKKMAQKLAARNA 1823
             VG   + Q K +  LA   A
Sbjct: 1309 DVGPPGSIQPKTSPVLARAEA 1329



 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 25/227 (11%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQ ++   A+ +N I   +TG GKTLI+                 M+A+FLVPKVPL
Sbjct: 12  ARLYQEELARHARDQNAIIAADTGTGKTLISA----------------MVALFLVPKVPL 55

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ   + E T + V  Y G MG D+WD   W +EF    +LVMT QI LNILRH+   
Sbjct: 56  VDQQRAFLEENTPFKVRGYSGAMGVDYWDKTAWTKEFMGVDILVMTPQIFLNILRHAHWS 115

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE-KRPSVFGMTASPV-NLKGVSSQVD 481
           ++ +++++ DE H+   K P +L+M E YHT      RP + G+TASP+ N K   +   
Sbjct: 116 IDRVSIIVFDEIHNCKGKSPEALIMMEHYHTIPNGLPRPKILGLTASPIFNPKKPVA--- 172

Query: 482 CAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAASLW 527
               +  +E   D  V  +K   E L KH     +++V+Y    S++
Sbjct: 173 ---ALAEIEKLTDCKVYVVKAHTEDLAKHTFQAEDMIVDYPPTPSIF 216



 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 144/301 (47%), Gaps = 32/301 (10%)

Query: 717 QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN---------SQEMRTF 767
           Q +  FR IIF      A  L  +F  L  +  V++  ++GH             +   F
Sbjct: 353 QDSTSFRGIIFTYERQIATTLSLMFPRL-GIPGVRAGPIVGHGLHACSVPEILGMKGMPF 411

Query: 768 QMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
           + Q+  +A FR G + L++ATSVAEEGLD   C+ V RFD  +T+  YIQSRGRAR  GS
Sbjct: 412 KTQDKVVADFRMGGLNLIIATSVAEEGLDFPLCSFVCRFDPPRTLPQYIQSRGRARMAGS 471

Query: 827 DYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL----ISVDAVPGTV 882
            +++M+E G       +   +  E  +R + +  +++    D   L       D + G  
Sbjct: 472 TFVIMLEEGPSKERETVEALQVGE--IRAKTMYGSNMDREDDEVELDENTPKDDGLEGR- 528

Query: 883 YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS-ILRPEFIMERHEKPGGPTEYSCKLQLP 941
           + VE TGA ++   ++ L++  CS +P D ++  L+P +  +       P  +    +LP
Sbjct: 529 FIVEKTGASLTPAGSISLLNNLCSLIPRDDHTRSLQPVYETD-------PVTFRTTNRLP 581

Query: 942 CNAPFEK-----LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-DKGSGEQQEKV 995
              P  +     +  P C + + A++     A  +L+E+G F D LLP  +  G+  E +
Sbjct: 582 PALPIPREDLLFVSDPFCRTKKAAKRNAAFKAVLRLYELGVFDDFLLPIRREKGDTAEDI 641

Query: 996 D 996
           D
Sbjct: 642 D 642


>gi|47210543|emb|CAF93935.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 479

 Score =  164 bits (416), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 177/347 (51%), Gaps = 40/347 (11%)

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------------- 1566
            D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V                
Sbjct: 129  DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEQGAAAGAAQSGR 188

Query: 1567 --ESDPEEVGCPSRPACV-----PESVLRSV--DFHALEDALKIKFKDRGLLVEAITHAS 1617
               SD         P C+      E  L  +   F   E  +   F+++  L++A THAS
Sbjct: 189  TAASDLCYGWLKIPPRCMLDHPDAEHTLNHLISGFENFERKISYTFQNKAYLLQAFTHAS 248

Query: 1618 RPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
               + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +AVK
Sbjct: 249  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 308

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKVLGDI 1727
            +  H + +  S  L   I DFV+  LE         EL +   +     D + PK +GDI
Sbjct: 309  YDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDI 368

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYK 1785
             ES+AGAI++DSG     VWQV+ P++ P++      +P  PVREL E   + A+    +
Sbjct: 369  FESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAE 428

Query: 1786 ASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 429  RTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 473



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            +L+A T AS      T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N
Sbjct: 240  LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN 299

Query: 1444 LVLYQYALSKGLQSYIQA 1461
             +    A+      Y +A
Sbjct: 300  TIFASLAVKYDYHKYFKA 317


>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
 gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
          Length = 1713

 Score =  163 bits (413), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 221/500 (44%), Gaps = 95/500 (19%)

Query: 1363 RRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF 1422
            + V+  +L   + +K   P    + L A+T A   + F  ER ELLGD +LK   + +L 
Sbjct: 1160 QEVQLSVLQRSISNKHITPAEQGEFLAAITYAGSVDVFDMERFELLGDCFLKLSATLYLA 1219

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVF---- 1478
             KYP+ +EG LT+++  +VSN  L        + S I    F P  +  P  L +     
Sbjct: 1220 SKYPKWNEGTLTQVKSTLVSNRNLLYCIRDTDIPSRICFTLFTPKYFWLPPCLSLPQNVQ 1279

Query: 1479 -------DEDTKDGDSSLFDQEKSVAEDKLGTDK----NYNEYEDDDMEDGELEGDSSSY 1527
                   D+    G  +L +   S  E+  G  K     YN + D    + +       +
Sbjct: 1280 QLWQQHPDKAALVGPHNLRNLTMS-EEEVFGNGKCAESTYNSFLDSCRANQQTHNAGMDF 1338

Query: 1528 RV----------LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPS 1577
                        + +K LAD +EAL+GV     G      ++++ GI     P+ +G P 
Sbjct: 1339 SSEVDFCVGQVKMPNKVLADTLEALLGVIIKNYGLQHGFRMLEYFGI---CKPD-IGKPL 1394

Query: 1578 RPAC---VPESVLRS-----------VDFHALEDALKIKFKDRGLLVEAITHASRPSSGV 1623
                   +  + LR+           ++  ALE  L   F+DR  L++A+TH S P++ +
Sbjct: 1395 TQLLDLQLGSTQLRTNITKREVDEFLINHSALEHNLGYTFRDRAYLLQALTHPSNPTNRL 1454

Query: 1624 S-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
            + CYQ LEFVGDA+LD LI+ ++F   T + PG+LTDLR+A VNN   A + V+H++H  
Sbjct: 1455 TGCYQELEFVGDAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACICVRHRIHFF 1514

Query: 1683 LRHGSSALDRQIRDFVK------------------------------------------- 1699
            +   ++ L   I++FV+                                           
Sbjct: 1515 ILAENAMLSDSIQNFVRFQETQNHRVTNQVRILMEESDLMPGPLDSDDELEMAEADEQQA 1574

Query: 1700 ---EVLEELLKPGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
                +  +  KP    + +  +   PK LGD++E++  AI+LD  RD +  WQV   L +
Sbjct: 1575 SQPAITADTKKPEVGEYNISTNVDVPKTLGDVLEALIAAIYLDC-RDLNTTWQVVYKLFE 1633

Query: 1756 P--MVTPETLPMHPVRELQE 1773
            P  +     +P++P+R+L +
Sbjct: 1634 PELLEFSRNVPLNPIRQLND 1653



 Score =  130 bits (326), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 128/240 (53%), Gaps = 9/240 (3%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--MLAVFLVPK 360
           +AR YQL ++E   K+N I +L TG+GKT +A+L ++    +  +  ++    A+FL   
Sbjct: 2   EARDYQLRIVEYIAKRNGIIYLPTGSGKTYVAILALKRFSQNFDKSIEEGGQRALFLCNT 61

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQA  +R  T + VG Y GE+G D W   +W  E    QVLV TAQ++L++    
Sbjct: 62  VELARQQAVFVRRYTNFKVGFYVGEVGVDNWVRSKWTDEIRDNQVLVGTAQVILDMALQK 121

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK-RPSVFGMTASPVNLKGVSSQ 479
            + +++++++ILDECHH    HPY   M  F    +     P V G+T   V +KG   +
Sbjct: 122 HLDLKSVSIVILDECHHGTGHHPYHEFMRLFQMAQANATPLPRVVGLTG--VLIKGNEIK 179

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEYDKAASLWSLHEQLKQM 536
            + A K+  LES     + T+ D KE+E    H   P E +V Y+     + + E+++ +
Sbjct: 180 -NVAKKLKELESTYLGNIVTVSDMKEMENVMLHSTKPREYLVAYNDRNQTFEVIEEIRSL 238



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 31/307 (10%)

Query: 703 TPKVQSLIKIL---LKYQHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS 754
           TPKVQ  ++ L      ++ +D   ++FVER      +  L+L K  A +P L  V +  
Sbjct: 359 TPKVQRFLQYLKDTFANKNPKDICCLVFVERRYTCKCIYGLLL-KYIAAVPELRNVLAPQ 417

Query: 755 -LIGHNN-----SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
            ++G N         +    ++  I +FRDG   ++V +SV EEG+D++ CN V+  D  
Sbjct: 418 FMVGRNGIFLDFESVLERRWLRSAIQQFRDGEANMMVCSSVLEEGIDVQACNYVMILDPI 477

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATF-LRNARNSE----ETLRKEAIERTDL 863
           KT   Y+Q++GRAR   + ++L     N    +  ++  R +     E L+   +ER+D 
Sbjct: 478 KTFNMYVQTKGRARAKDASFVLFSSELNKPKISLQIQQYRQAHVEIREYLKDRVLERSDP 537

Query: 864 SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM- 922
               D  R    D +   V Q    GAV+  +SA+ LIH Y  Q+P+D +  + P F + 
Sbjct: 538 K--MDEIREHFQDQIKPYVNQ---NGAVLLASSALMLIHRYVQQMPTDAFGTVLPWFKLL 592

Query: 923 ---ERHE-KPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
              ER E       +Y   L LP N+   + +      +   A+ +    AC KLHE+G 
Sbjct: 593 DPNERRELTQNSQGKYVVSLNLPLNSALRDTIYSDPMPNGHWAKISAAFKACIKLHELGE 652

Query: 978 FTDMLLP 984
             +  LP
Sbjct: 653 LNERFLP 659



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 19/155 (12%)

Query: 1231 NAGDLEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY 1287
            N  D EG+IVT   A +  KR  V  +  ++TA S    K+      + +SY  +   KY
Sbjct: 864  NPKDFEGKIVTQWYANYDEKRMLVTKVHTDLTAMSMMQEKQ------QENSYYKFTMSKY 917

Query: 1288 GV---ELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI 1344
                 +++ K   LI  R        L+ +     +Q  +   +      V L PELCF 
Sbjct: 918  SNYIGDIVHKDHFLIEVRE-------LTDQMNFYVQQRVKTSALSKLRSKVMLIPELCFN 970

Query: 1345 HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN 1379
               PG L      LPSI+RRV  ML A  L+ +IN
Sbjct: 971  FGFPGDLWVKLLFLPSILRRVHYMLHAEALRVRIN 1005


>gi|19072784|gb|AAL84637.1|AF484523_1 endoribonuclease Dicer [Mus musculus]
          Length = 361

 Score =  163 bits (413), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 174/357 (48%), Gaps = 63/357 (17%)

Query: 1536 ADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----------ESDPE------------- 1571
            AD VEAL+G Y    G+ AA   +  +G++V             DP              
Sbjct: 1    ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSG 60

Query: 1572 ----------------EVGCPSRPA-CV-----PESVLRSV--DFHALEDALKIKFKDRG 1607
                            E GC   P  C+      E  L  +   F   E  +  +FK++ 
Sbjct: 61   SCASPVGPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKA 120

Query: 1608 LLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VN
Sbjct: 121  YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN 180

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGD 1717
            N  FA +AVK+  H + +  S  L   I DFVK  LE         EL +   +     D
Sbjct: 181  NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGMDSELRRSEEDEEKEED 240

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERC 1775
             + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      +P  PVREL E  
Sbjct: 241  IEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELLEME 300

Query: 1776 QQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             + A+    + +  G +  TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 301  PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 355



 Score = 50.1 bits (118), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 44/220 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 83   IPPRCMFDHP------DAEKTLNHLISGFET------FEKKINYRFKNKAYLLQAFTHAS 130

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 131  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 190

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
                 Y +A         +P +  V D+  K      F  EK             NE + 
Sbjct: 191  YDYHKYFKA--------VSPELFHVIDDFVK------FQLEK-------------NEMQG 223

Query: 1513 DDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             D E     E +     +   K + D+ E+L G  Y++ G
Sbjct: 224  MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSG 263


>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
          Length = 1520

 Score =  162 bits (411), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 123/221 (55%), Gaps = 6/221 (2%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRS----ICNDLQRQNKKMLAVFLVP 359
           AR YQL++L+ A +KNTI  L TGAGKT IAVLLI+     I +  +        +FLV 
Sbjct: 6   ARSYQLELLDSAIEKNTIVLLGTGAGKTFIAVLLIKQFSHEILDSFRDNPNSKRTIFLVT 65

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            V LV QQA  IR      VG Y GEMG D W   +W  E +   +LVMT QI L++L H
Sbjct: 66  TVALVTQQANYIRTHIDLNVGTYYGEMGVDAWRLTKWNSELECNHILVMTRQIFLDMLSH 125

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQ 479
             I M  +NL+I DECHHAVK  PY  +M  +        +P + G+TAS ++ K    +
Sbjct: 126 GFISMSRVNLIIFDECHHAVKNDPYVQIMKHYNDERYMCNKPHILGLTASIISGKCKPDK 185

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
           ++  I+   LE+ L++ V T  D  E+ K+   P E +V Y
Sbjct: 186 LEERIR--KLEATLNARVETATDLAEVAKYATNPQESLVTY 224



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 157/300 (52%), Gaps = 36/300 (12%)

Query: 703 TPKVQSLIKILLKYQHT--EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +PK   L++ILL  + +  EDF  I+FVE+ + A+ L ++  E+  L  ++ + ++GH +
Sbjct: 340 SPKFSKLLEILLNLRSSQAEDFCGIVFVEQRMTAMCLSQIITEI-KLPGIRCSFIVGHAS 398

Query: 761 SQE------------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           S              M   + QE + KFR G + LL+ATSV EEGLD+R+CNVVIR+D  
Sbjct: 399 SSGKIMEKKVSGSGGMNAKKQQEVLKKFRSGTLNLLIATSVVEEGLDVRKCNVVIRYDFP 458

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATF-LRNARNSEETLRKEAIERTDLSHLK 867
           KT  +++QS+GRAR   S Y+++I++   S  T  ++     EE L      R       
Sbjct: 459 KTFQSHVQSKGRARAKDSRYLVLIDQTQESKCTCDIKEYAKLEEMLASLCHNRESPDE-D 517

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME---- 923
           + SR +     P   Y    +G  + ++S++ L+H YC +LP D+Y+++ P+F +E    
Sbjct: 518 EVSRQLMHLMKPYQPYG--PSGPSLPIDSSLSLLHRYCQKLPGDQYTVMAPDFKLEPVDD 575

Query: 924 --------RHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEM 975
                   R+E     T + C + LP  +P    +G     + LA+Q+    A + LH++
Sbjct: 576 AICQLDGRRYE-----TLFMCTVYLPTCSPVRSAQGIAVPRVNLARQSAAFIAIQDLHKV 630



 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 38/272 (13%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSG--VSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            +L D L   F DR LL++A+TH S  +       YQRLEF+GDAVLD+LIT  L+  + +
Sbjct: 1240 SLYDKLSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYLITCCLYTEFPS 1299

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEVLEELLKPG- 1709
              PG++T+ R+A VNN  FA +AVK   LH +L + S +L R+I ++V+ + E+  + G 
Sbjct: 1300 YTPGQITETRSALVNNVTFAEIAVKKLSLHTYLLYLSPSLFRKITEYVEFLQEDERESGS 1359

Query: 1710 -----FNSFG------------------------LGDCKAPKVLGDIVESIAGAIFLDSG 1740
                 +  FG                        + + + PKVLGD++ES+AGA+FLDSG
Sbjct: 1360 EKELIYCRFGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDVLESLAGALFLDSG 1419

Query: 1741 RDTSVVWQVFQPLLDPMVTP---ETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEV 1797
                 VW  F P   P++     +  P+HP++EL  R +   E ++    RS +  T++V
Sbjct: 1420 MSLETVWSYFYPFFRPLIESFKEKGPPVHPIQELM-RTEPSVEIMQSSTRRSKHRCTIKV 1478

Query: 1798 YIDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
                +QV        K A+  AA+  +  +KE
Sbjct: 1479 IDKDIQVSCIAE-SYKTAKNGAAKRVIRKIKE 1509



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 142/359 (39%), Gaps = 100/359 (27%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKN---LLSPRFEHSEEQEGEG--EEILDKT 1332
            SY +Y+  KYG  +++   P +  + VS   N   LL  RF+ +         +E   ++
Sbjct: 825  SYFEYFLNKYGYSIVYICDPSLTCKPVSMGVNGVRLLVSRFKDTNRSSASAPDDESSQRS 884

Query: 1333 YYVFLPPELC------------------FIHPLPGSLV--RGAQRL-------------- 1358
              + L PELC                   IH L G L+    AQ +              
Sbjct: 885  SEIRLFPELCKVWPIPASFWKLCRCVPSIIHRLVGFLLAEELAQSISSFTGIGVTEVYEY 944

Query: 1359 ---PSIMRRVE-----------------SMLLAIQLKDKINYPVPA---------SKILE 1389
               P IMR  E                   ++     ++++  V A         S +L+
Sbjct: 945  RCHPDIMREGEPNEMEHNSESVFHWRDGGYIVDADTSNQLHSQVNAEGVIRGPSNSLLLQ 1004

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            +LT  S +++F  ER E LGD++LK  VS  LF    + HEG+LTR R   +SN  L   
Sbjct: 1005 SLTGTSAKDSFDLERLETLGDSFLKLAVSVSLFCGRGKDHEGKLTRSRINRISNFNLSFL 1064

Query: 1450 ALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT--DKN 1506
            A  KGL   +Q ++F P S W  PG        +   DS+L D    V  + L     K 
Sbjct: 1065 AKKKGLPGLLQTEQFEPLSGWIPPGF-------SLSLDSALPDH---VPPNTLPAVIQKY 1114

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
            Y                   Y  ++ K +AD  EAL+G Y + GG  A    + W+G+Q
Sbjct: 1115 Y-------------------YHKVTDKGIADSTEALLGAYLIAGGLGAGFSFLDWLGLQ 1154



 Score = 52.4 bits (124), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 14/172 (8%)

Query: 1387 ILEALTAASCQE----TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            +L+ALT  S       T  Y+R E LGDA L ++++  L+ ++P    GQ+T  R  +V+
Sbjct: 1255 LLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYLITCCLYTEFPSYTPGQITETRSALVN 1314

Query: 1443 NLVLYQYALSK-GLQSYIQADRFAPSRW-AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            N+   + A+ K  L +Y+     +PS +      +    ED ++  S     EK +   +
Sbjct: 1315 NVTFAEIAVKKLSLHTYLL--YLSPSLFRKITEYVEFLQEDERESGS-----EKELIYCR 1367

Query: 1501 LG-TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             G   +N +E  + D+   E E ++    +   K L DV+E+L G  +++ G
Sbjct: 1368 FGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDVLESLAGALFLDSG 1419


>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
 gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
          Length = 1727

 Score =  162 bits (411), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 216/469 (46%), Gaps = 83/469 (17%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            S+ L A+T +   + F  ER E+LGD++LK   S +L  +Y   +EG LT+++ ++VSN 
Sbjct: 1202 SEFLAAITTSGSADVFDMERLEMLGDSFLKMSGSLYLANRYADWNEGTLTQVKSKLVSNR 1261

Query: 1445 VLYQYALSKG-LQSYIQADRFAPS-RWAAPGV------LPVFDEDTKDG---------DS 1487
             L  Y LS+  + + I +  F P   W  PGV      L +++               D 
Sbjct: 1262 NLL-YCLSETDIPTRISSSLFTPKYTWIPPGVSLPRNVLALWNNKPDVAKLVGPHNLRDL 1320

Query: 1488 SLFDQEK----SVAEDKL-----GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADV 1538
            +L D+E     + +E  L     G  KN + +  D     EL        + + K +AD 
Sbjct: 1321 TLTDEESLITGTCSESTLSTFMDGCRKNMSSHHADTDFSAELNFCIGRANI-ADKVVADT 1379

Query: 1539 VEALIGVYYVEGGKDAANHLMKWIGIQVES---------DPEEVGCPSRPACVPESVLRS 1589
            +EAL+GV     G      ++++ GI             D    G   R       +   
Sbjct: 1380 LEALLGVVVKNYGLTHGFRMLEYFGICKADIGKPLTQLLDLRLGGANMRTNVSTTEIDSF 1439

Query: 1590 VDFHA-LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFF 1647
            +  HA LE  L   FKDRG L++A+TH S P++ ++ CYQ+LEF+GDA+LD LI+ ++F 
Sbjct: 1440 LINHANLEQNLGYTFKDRGYLLQALTHPSYPTNRITGCYQQLEFIGDAILDFLISGYIFE 1499

Query: 1648 SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------- 1699
            + T + PG+LTDLR+A VNN   A + V+HK+H+ +   ++ L   I  FV+        
Sbjct: 1500 NNTKMTPGQLTDLRSALVNNTTLACICVRHKIHLFILAENALLSEAIASFVQFQETQNHR 1559

Query: 1700 -----------------------------EVLEELLKPGFNSFG----LGDCKAPKVLGD 1726
                                         E  E     G  + G      +   PK LGD
Sbjct: 1560 VTNHVRILLEENDTTPLDVDGEVKSMEIDETTESEENNGVPTKGDYNMSQNVDVPKALGD 1619

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVRELQE 1773
            ++E++  A++LD  RD    WQV   L  P +   T  +P++P+R+L E
Sbjct: 1620 VLEALIAAVYLDC-RDLHRTWQVIYNLFKPEIKEFTRNVPINPIRQLNE 1667



 Score =  133 bits (335), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 153/299 (51%), Gaps = 30/299 (10%)

Query: 290 GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-- 347
            + +EA E  P    R YQL +++   ++N I +L TG+GKT +A+L ++    D+ +  
Sbjct: 3   SQDAEAAEIKP----RSYQLRLVDHITRQNGIIYLPTGSGKTFVAILALKRFSQDMDKTI 58

Query: 348 QNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
           ++    A+F+   V L  QQA  I+  T   VG Y GE G D W   +W+ E   KQV+V
Sbjct: 59  EDGGKRAIFMCNTVELARQQAVAIKRFTNLKVGFYVGEQGVDDWPRGQWETEIRDKQVMV 118

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
            TAQ++L++     +++++++++I+DECHH    HP+   M  F + +S E  P V G+T
Sbjct: 119 GTAQVMLDVFTQRHMELKSVSIVIIDECHHGTGHHPFHEFMRLFLYGSSNE-LPRVVGLT 177

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEK---HVPMPSEVVVEY---- 520
              V +KG   + + A ++ +LE+     + T+ D  +LE    H   P E +++Y    
Sbjct: 178 G--VLIKGNEVK-NVARRLKDLETTYRGNIITVSDTADLENVMLHSTKPKEYMIQYPAQC 234

Query: 521 -------DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYG 572
                  D    +++    L Q+++ V+       RRSK   M  RD   K  ++ ++ 
Sbjct: 235 QKYSLVADVERMIFNFFAVLDQLDIGVQ-----PQRRSK-GLMNLRDPHKKSAIKALFN 287



 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 32/308 (10%)

Query: 703 TPKVQSLIKILLKY---QHTEDFRAIIFVER-----VVAALVLPKVFAELPSLSFVKSAS 754
           TPKVQ  ++ L +    +  +D   ++FVER      +  LVL  + A       +    
Sbjct: 371 TPKVQRFLQYLKQTFAGKQPKDICCLVFVERRYTAKCIFGLVLHFIQATPELRDVLVPQF 430

Query: 755 LIGHNN-SQEMRT-----FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           ++G N+ SQ+  +     FQ +  I +FRDG   L++ +SV EEG+D++ CN V+  D  
Sbjct: 431 MVGRNSISQDFESVLEGKFQ-KSAIQQFRDGEANLMICSSVLEEGIDVQACNYVLILDSL 489

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHAT-----FLRNARNSEETLRKEAIERTDL 863
           KT   Y+Q++GRAR   + +I+     N    +     + +   +  E L+   +ER  L
Sbjct: 490 KTFNMYVQTKGRARSKEAVFIIFSADANTGEVSKQIGQYRQAHSDISEYLKGRVLERA-L 548

Query: 864 SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM- 922
               + +     D +P   ++ E  G+++  ++A+ L+H YC  LPSD +  + P   + 
Sbjct: 549 PLPNEITEHFQ-DIIPP--FKNEH-GSILLASNALILLHRYCQSLPSDAFGFVVPWINLV 604

Query: 923 ---ERHEKPGGPTEYS--CKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
              ER ++ G   EY     + LP  +   + +       ++ A+ +    ACK L+E+G
Sbjct: 605 EPKERVKRFGKSAEYKQVVSIVLPLTSSLKDTIYSYPMDCVKSAKVSAAFNACKLLYELG 664

Query: 977 AFTDMLLP 984
              +  LP
Sbjct: 665 ELGEKFLP 672


>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
 gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
          Length = 2336

 Score =  162 bits (410), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 179/384 (46%), Gaps = 86/384 (22%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP 1579
            +  K++AD VEALIG Y +E G   A   M W+GI+V           S+ E    P + 
Sbjct: 1945 IPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTPYKA 2004

Query: 1580 A--------------------CVPESVLRS-VDFHALE---------------------D 1597
                                   P  ++R+ + F  +E                      
Sbjct: 2005 TGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEEFEQ 2064

Query: 1598 ALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            AL  +F+DR  L++A+THAS  P+    CYQRLEF+GDA+LD+LIT+HL+       PG 
Sbjct: 2065 ALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGA 2124

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK----------------- 1699
            LTDLR+A VNN  FA +AV+H  H +  H S  L   I  FV+                 
Sbjct: 2125 LTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYYLP 2184

Query: 1700 ---EVLEELLKPGFNSFGLG-------DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
               + L E    G +  G G       D + PK LGD+ ESIAGAIFLDS      VW+V
Sbjct: 2185 DEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKV 2244

Query: 1750 FQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVG 1805
            ++ ++ P +     ++P  P+REL E   + A+  + +    G     TVEV+  G   G
Sbjct: 2245 YRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTFRG 2304

Query: 1806 VAQNPQKKMAQKLAARNALAVLKE 1829
            + +N   ++A+  AA+ AL  LK+
Sbjct: 2305 IGRN--YRIAKCTAAKCALRQLKK 2326



 Score = 74.3 bits (181), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++ +S+FP          Y+++ +YY +KY + +  ++QPL+     S   
Sbjct: 1121 FYVAEICNHLSPKSTFPGSN-------YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARL 1173

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1174 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTIHPFPASLWRAAVCLP 1231

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             ++ R+ ++LLA +++ ++
Sbjct: 1232 CVLYRINALLLADEIRRQV 1250



 Score = 67.4 bits (163), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  IL+ALT ++  +    ER E +GD++LK+ ++ +L+ +Y   HEG+L+ +R + 
Sbjct: 1742 PSPAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1800

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP 1472
            VSNL LY+    K L   + A +F P   W  P
Sbjct: 1801 VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1833



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 44/69 (63%)

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           + +E + +FR     LL+ TSV EEG+++ +CN+VIR++      +Y Q +GRA+ PG+ 
Sbjct: 599 KQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGAY 658

Query: 828 YILMIERGN 836
           ++L +   N
Sbjct: 659 HVLFVTPEN 667



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +L+A+T AS      T CY+R E LGDA L ++++R L+    Q   G LT +R  +V
Sbjct: 2074 SYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALV 2133

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N +    A+  G   Y            +PG+  V D   +        QE      ++
Sbjct: 2134 NNTIFASLAVRHGFHKYFLH--------LSPGLQEVIDRFVR------IQQENG---HRI 2176

Query: 1502 GTDKNYNEYEDDDM-------EDGELEGD--SSSYRVLSSKTLADVVEALIGVYYVE 1549
              ++ Y   EDD++       EDG  EG     +  V   K L DV E++ G  +++
Sbjct: 2177 TEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLD 2233



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
            Q   T A + L +A+  ++ YC++LPSD ++ L P +      + G    Y   ++LP N
Sbjct: 770  QSNGTCASLWLGNAIQTLNKYCAKLPSDTFTKLTPIWRCATTVRKGRKL-YQYTIRLPIN 828

Query: 944  APF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP-------------DKGSG 989
            +P+ E + G    +  LA++      C+ LH  G   +   P             +    
Sbjct: 829  SPWKEDILGLPMPTETLARRLAAYMTCRMLHAAGELDNSFQPFGKEAFRAFEADWENFEL 888

Query: 990  EQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFM 1044
            E+ +    ++  +P PGT + R++Y + +A +          D  T + L+H+ M
Sbjct: 889  EESDAKILSENSDPRPGTTKRRQYYYKRIASVFNE----CRPDAETVAYLYHIRM 939



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             ++++A+T  S  + G++  +RLE +GD+ L + IT +L+  Y N+  G+L+ LR+  V+
Sbjct: 1745 AIILQALT-MSNANDGIN-LERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1802

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  + +L
Sbjct: 1803 NLNLYRLGRRKRL 1815


>gi|71051733|gb|AAH98796.1| Dicer1 protein [Rattus norvegicus]
          Length = 401

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 181/370 (48%), Gaps = 63/370 (17%)

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------------- 1566
            D  + + ++ K++AD VEAL+G Y    G+ AA   +  +G++V                
Sbjct: 28   DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPA 87

Query: 1567 -------ESDPE-----------------EVGCPSRPA-CV-----PESVLRSV--DFHA 1594
                   +  P                  E GC   P  C+      E  L  +   F  
Sbjct: 88   QENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFEN 147

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             E  +   FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+       
Sbjct: 148  FEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 207

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE---------E 1704
            PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE         E
Sbjct: 208  PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE 267

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PET 1762
            L +   +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++      
Sbjct: 268  LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSAN 327

Query: 1763 LPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAAR 1821
            +P  PVREL E   + A+    + +  G +  TVE+   G   GV ++   ++A+  AAR
Sbjct: 328  VPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVELVGKGKFKGVGRS--YRIAKSAAAR 385

Query: 1822 NALAVLKEKE 1831
             AL  LK  +
Sbjct: 386  RALRSLKANQ 395



 Score = 49.3 bits (116), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-ASKILEALTAAS 1395
            +PP   F HP         + L  ++   E+       + KINY     + +L+A T AS
Sbjct: 123  IPPRCMFDHP------DAEKTLNHLISGFEN------FEKKINYIFKNKAYLLQAFTHAS 170

Query: 1396 CQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
                  T CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+ 
Sbjct: 171  YHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVK 230

Query: 1453 KGLQSYIQA 1461
                 Y +A
Sbjct: 231  YDYHKYFKA 239


>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
 gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
          Length = 2256

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 179/384 (46%), Gaps = 86/384 (22%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP 1579
            +  K++AD VEALIG Y +E G   A   M W+GI+V           S+ E    P + 
Sbjct: 1865 IPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTPYKA 1924

Query: 1580 A--------------------CVPESVLRS-VDFHALE---------------------D 1597
                                   P  ++R+ + F  +E                      
Sbjct: 1925 TGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEEFEQ 1984

Query: 1598 ALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            AL  +F+DR  L++A+THAS  P+    CYQRLEF+GDA+LD+LIT+HL+       PG 
Sbjct: 1985 ALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGA 2044

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK----------------- 1699
            LTDLR+A VNN  FA +AV+H  H +  H S  L   I  FV+                 
Sbjct: 2045 LTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYYLP 2104

Query: 1700 ---EVLEELLKPGFNSFGLG-------DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
               + L E    G +  G G       D + PK LGD+ ESIAGAIFLDS      VW+V
Sbjct: 2105 DEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKV 2164

Query: 1750 FQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVG 1805
            ++ ++ P +     ++P  P+REL E   + A+  + +    G     TVEV+  G   G
Sbjct: 2165 YRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTFRG 2224

Query: 1806 VAQNPQKKMAQKLAARNALAVLKE 1829
            + +N   ++A+  AA+ AL  LK+
Sbjct: 2225 IGRN--YRIAKCTAAKCALRQLKK 2246



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++ +S+FP          Y+++ +YY +KY + +  ++QPL+     S   
Sbjct: 1041 FYVAEICNHLSPKSTFPGSN-------YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARL 1093

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1094 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTIHPFPASLWRAAVCLP 1151

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             ++ R+ ++LLA +++ ++
Sbjct: 1152 CVLYRINALLLADEIRRQV 1170



 Score = 67.8 bits (164), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  IL+ALT ++  +    ER E +GD++LK+ ++ +L+ +Y   HEG+L+ +R + 
Sbjct: 1662 PSPAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1720

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP 1472
            VSNL LY+    K L   + A +F P   W  P
Sbjct: 1721 VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1753



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 44/69 (63%)

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           + +E + +FR     LL+ TSV EEG+++ +CN+VIR++      +Y Q +GRA+ PG+ 
Sbjct: 599 KQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGAY 658

Query: 828 YILMIERGN 836
           ++L +   N
Sbjct: 659 HVLFVTPEN 667



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +L+A+T AS      T CY+R E LGDA L ++++R L+    Q   G LT +R  +V
Sbjct: 1994 SYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALV 2053

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N +    A+  G   Y            +PG+  V D   +        QE      ++
Sbjct: 2054 NNTIFASLAVRHGFHKYFLH--------LSPGLQEVIDRFVR------IQQENG---HRI 2096

Query: 1502 GTDKNYNEYEDDDM-------EDGELEGD--SSSYRVLSSKTLADVVEALIGVYYVE 1549
              ++ Y   EDD++       EDG  EG     +  V   K L DV E++ G  +++
Sbjct: 2097 TEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLD 2153



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             ++++A+T  S  + G++  +RLE +GD+ L + IT +L+  Y N+  G+L+ LR+  V+
Sbjct: 1665 AIILQALT-MSNANDGIN-LERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  + +L
Sbjct: 1723 NLNLYRLGRRKRL 1735


>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
          Length = 1860

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 231/543 (42%), Gaps = 98/543 (18%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP+++   +S  +NLL          E + +E L+K  +V L P    + P+P  +V   
Sbjct: 1294 QPVVKAELLSLRRNLLD---------EFQTDENLNKDCFVILEP--LRVSPIPIDVVFMT 1342

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+I+ R+ES+L+A+     ++  +P +  L+ALT            Q  F       
Sbjct: 1343 MTFPAIINRIESILIALDACASLDLTIPPALALQALTKDGGGTGDLDVKQSNFQPGMGDN 1402

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD++LK   +  LF   P+ +E      R  ++ N  L+ + +   L  YI++
Sbjct: 1403 YERLEFLGDSFLKMATTISLFTLIPESNECGYHAERVLLICNQNLFNHGVEHNLHQYIRS 1462

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W                                        Y D  ++ G++ 
Sbjct: 1463 KSFDRRAW----------------------------------------YPDLPLKKGKVT 1482

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGC------ 1575
              + ++  L+ KT+ADV EALIG  Y+ G +   +  +K +   V+S   E+        
Sbjct: 1483 KTTMTHD-LADKTIADVCEALIGAAYLSGEEGNMDMGVKAVTRMVKSKNHEMEFFRDYFA 1541

Query: 1576 -----PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLE 1630
                 P   A       R VD   +      +F    LL     H S P   V  YQRLE
Sbjct: 1542 AFKVPPWHTAKSTTLQRRLVD--CVAKVTGYRFNSSALLQSVFKHPSWPYEAVPDYQRLE 1599

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL 1690
            F+GDA+LD ++   L+  +    P  LT+ + A V+N+    + V+  LH HL   +S+L
Sbjct: 1600 FLGDALLDMVVVDFLYKRFKLADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSSL 1659

Query: 1691 DRQIRDFVKEVLEELLK------------PGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1738
              QI ++V E+  EL K            P    F L     PKVL D+ E++ GA+F+D
Sbjct: 1660 TGQISEYVAEL--ELAKEDAHKVAKANRTPTRMDFWLHASLPPKVLADVAEALIGAMFVD 1717

Query: 1739 SGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQQAEGLEYKASRSGNLA 1793
            +  + SVV Q F   ++P  T   L       HPV  L ++ QQ+   + ++ S      
Sbjct: 1718 AKYNYSVVNQFFTRFVEPYFTEMVLYDTFASQHPVTVLCKKMQQELCCVNWRISVGSVPC 1777

Query: 1794 TVE 1796
            TVE
Sbjct: 1778 TVE 1780



 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 167/336 (49%), Gaps = 40/336 (11%)

Query: 293 SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK-- 350
           + ++ +M     R YQ+++ E+AK++NTI  L TG+GKTLIA LL+R  C + + +++  
Sbjct: 428 TASENRMIITTPREYQIELFERAKRENTIVVLPTGSGKTLIAALLLRH-CLEQELEDRAA 486

Query: 351 ---KMLAVFLVPKVPLVYQQAEVIREQTG-YVVGHYCGEMG----QDFWDAQRWQREFDT 402
              K +A F+V KV L +QQ  V+    G Y V  + G+M     +D+W+ Q     F  
Sbjct: 487 GKPKRVAFFVVEKVALCFQQFAVLNCNLGAYPVTKFWGKMSGTKTKDYWNKQ-----FSD 541

Query: 403 KQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS 462
              +V TAQILL+ L  + I M  INLL+ DE HHA K+HPY+ ++   Y     +K P 
Sbjct: 542 NMAIVCTAQILLDCLNSNFINMSQINLLVFDEVHHAKKEHPYARIIKNHYVHHEGDK-PR 600

Query: 463 VFGMTASPV-----NLKGVSSQVDCAI--KICNLESKLDSVVCTIKDRKELEKH-----V 510
           + GMTASPV     + +G + +++  +  KI  +    D +  ++  RK+L++      +
Sbjct: 601 ILGMTASPVDAQTKDFEGTAVEIETFLCSKIATVSG--DVLANSMDLRKQLQEKAYYDAL 658

Query: 511 PMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSS----SRRSKWQFMGARDAG---A 563
             P E      +      LH  L +  +   E A S+         W  +   D     A
Sbjct: 659 RFPEESKTALRELIVGQILHNALFKASLEFTEEASSTLGSWCADRYWHLLITEDETMQLA 718

Query: 564 KEELRQVYGVSERTESDGAANLIQKLRAI--NYALG 597
            +  R+        ++DGA + ++++R I  N  LG
Sbjct: 719 AKTDREFAKSFASIKADGATDAVRRVRDIVKNNVLG 754



 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 143/280 (51%), Gaps = 27/280 (9%)

Query: 705  KVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF--VKSASLIGHNNS 761
            KV+ L +ILL  +      R I+FVE+   A +L  ++ + P +    + ++ +IG  +S
Sbjct: 766  KVKKLHEILLNAFTFNGTKRCIVFVEKRYTACLLSDLYQQ-PEMGIRGMNASYMIGRQSS 824

Query: 762  QEM---RTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                   +F+ Q  T+ +F+ G V  L AT VAEEG+DI  C++V+RFDL  +V+ Y+QS
Sbjct: 825  ISNIGGMSFRDQVITLQRFKRGDVNCLFATPVAEEGIDIPDCDLVVRFDLFNSVIQYLQS 884

Query: 818  RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA 877
            RGRAR+  S YI M+E GN      L+ A     +L K  +       L+D     S+D 
Sbjct: 885  RGRARQQRSKYITMLEHGNSKQIRSLKQAERDAASLEKFIMSLPSDRKLQDE----SMDP 940

Query: 878  VPGT--------VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG 929
            V  T        VY + STGA ++ + ++G++  + S L S     L  EF++ +     
Sbjct: 941  VTATQNELTTQKVYVMPSTGARLTFSISLGVLAKFTSSLSSSDNGNL--EFVVSKQ---- 994

Query: 930  GPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAAC 969
            GPT +   + LP ++P   + G    S  LA+ +    AC
Sbjct: 995  GPT-FIADVILPDSSPLRSMSGIPQRSKALAKCSAAFEAC 1033


>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
          Length = 2259

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 179/384 (46%), Gaps = 86/384 (22%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------ESDPEEVGCPSRP 1579
            +  K++AD VEALIG Y +E G   A   M W+GI+V           S+ E    P + 
Sbjct: 1868 IPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNETALTPYKA 1927

Query: 1580 A--------------------CVPESVLRS-VDFHALE---------------------D 1597
                                   P  ++R+ + F  +E                      
Sbjct: 1928 TGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLLQGFEEFEQ 1987

Query: 1598 ALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGR 1656
            AL  +F+DR  L++A+THAS  P+    CYQRLEF+GDA+LD+LIT+HL+       PG 
Sbjct: 1988 ALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGA 2047

Query: 1657 LTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK----------------- 1699
            LTDLR+A VNN  FA +AV+H  H +  H S  L   I  FV+                 
Sbjct: 2048 LTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYYLP 2107

Query: 1700 ---EVLEELLKPGFNSFGLG-------DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
               + L E    G +  G G       D + PK LGD+ ESIAGAIFLDS      VW+V
Sbjct: 2108 DEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKV 2167

Query: 1750 FQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVG 1805
            ++ ++ P +     ++P  P+REL E   + A+  + +    G     TVEV+  G   G
Sbjct: 2168 YRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTFRG 2227

Query: 1806 VAQNPQKKMAQKLAARNALAVLKE 1829
            + +N   ++A+  AA+ AL  LK+
Sbjct: 2228 IGRN--YRIAKCTAAKCALRQLKK 2249



 Score = 74.3 bits (181), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 18/139 (12%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCK 1308
            FYV  I   ++ +S+FP          Y+++ +YY +KY + +  ++QPL+     S   
Sbjct: 1041 FYVAEICNHLSPKSTFPGSN-------YATFEEYYHRKYKIHIQNQRQPLLDVDHTSARL 1093

Query: 1309 NLLSPRF---------EHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            N L+PR+           SEE +    E L++     L PELC IHP P SL R A  LP
Sbjct: 1094 NFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQ--ILVPELCTIHPFPASLWRAAVCLP 1151

Query: 1360 SIMRRVESMLLAIQLKDKI 1378
             ++ R+ ++LLA +++ ++
Sbjct: 1152 CVLYRINALLLADEIRRQV 1170



 Score = 67.4 bits (163), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  IL+ALT ++  +    ER E +GD++LK+ ++ +L+ +Y   HEG+L+ +R + 
Sbjct: 1662 PSPAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1720

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP 1472
            VSNL LY+    K L   + A +F P   W  P
Sbjct: 1721 VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 1753



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 44/69 (63%)

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
           + +E + +FR     LL+ TSV EEG+++ +CN+VIR++      +Y Q +GRA+ PG+ 
Sbjct: 599 KQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSYAQCKGRAKAPGAY 658

Query: 828 YILMIERGN 836
           ++L +   N
Sbjct: 659 HVLFVTPEN 667



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 29/177 (16%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +L+A+T AS      T CY+R E LGDA L ++++R L+    Q   G LT +R  +V
Sbjct: 1997 SYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALV 2056

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N +    A+  G   Y            +PG+  V D   +        QE      ++
Sbjct: 2057 NNTIFASLAVRHGFHKYFLH--------LSPGLQEVIDRFVR------IQQENG---HRI 2099

Query: 1502 GTDKNYNEYEDDDM-------EDGELEGD--SSSYRVLSSKTLADVVEALIGVYYVE 1549
              ++ Y   EDD++       EDG  EG     +  V   K L DV E++ G  +++
Sbjct: 2100 TEEEYYLPDEDDELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLD 2156



 Score = 46.2 bits (108), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             ++++A+T  S  + G++  +RLE +GD+ L + IT +L+  Y N+  G+L+ LR+  V+
Sbjct: 1665 AIILQALT-MSNANDGIN-LERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 1722

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  + +L
Sbjct: 1723 NLNLYRLGRRKRL 1735


>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1460

 Score =  162 bits (409), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 132/225 (58%), Gaps = 11/225 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A+  N IA L+TG+GKT I++LLI+ I   LQ + K+ + VFLVPKV LV
Sbjct: 18  RRYQEEIFRRAQNSNVIAALDTGSGKTFISILLIKWIV--LQEKAKRKVIVFLVPKVALV 75

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQA+ I   T   V  + G +  D  D   W++ F+   + V  AQI LNIL HS   +
Sbjct: 76  KQQADSIAAHTPLRVKMFHGSLDLDLTDRANWKKSFEQSDLTVAAAQIFLNILTHSHWSV 135

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGVSSQVDCA 483
           E ++LLI DECHH  K H Y+ +M E++ T   + RP VFGMTASP+ N K      D  
Sbjct: 136 EKVSLLIFDECHHTRKNHAYNGIMHEYFQTIPSD-RPKVFGMTASPIWNPK------DAE 188

Query: 484 IKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
             +  LE  LD+ V  +++  +EL+++ P P EV+ E+   +  +
Sbjct: 189 GSLATLEKNLDATVIAVREHVEELQENSPRPVEVIKEFSPPSDTY 233



 Score =  158 bits (399), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 41/337 (12%)

Query: 684 SGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAE 743
           SG E   V I   +A    TPKV +L+++LL++ ++  F AI+FVE+   A  L K+   
Sbjct: 349 SGTEVPAVPIPVPLA--WCTPKVNALVEVLLEH-YSPTFHAIVFVEQRQVAACLAKILPC 405

Query: 744 LPSL-SFVKSASLIGH-----------NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAE 791
           +P L  +V+ A L+GH           +N++ M   + Q+T+  FR G++ LLVATSVAE
Sbjct: 406 IPELRGYVRCAELVGHGANHGHGPVVNSNARGMGLARQQDTVELFRQGKLNLLVATSVAE 465

Query: 792 EGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEE 851
           EGL    C++V+RFD  + ++ Y+QSRGRAR   S +++M ++ + +H         SE 
Sbjct: 466 EGLHFPACDIVVRFDPIQHMVGYVQSRGRARTKTSTFVIMAQKDHSAHLVRYNAFLKSEP 525

Query: 852 TLR-----KEAIERTDLSHLKDTSRLISVDAVPGTV-----YQVESTGAVVSLNSAVGLI 901
            L+     +E    T L   +D+      +  P  V     Y V STGAV++ +SAV L+
Sbjct: 526 ELKRVYQTREEPAATRLDPGEDSEEGEVEEDDPADVAVRERYIVPSTGAVLTYDSAVNLL 585

Query: 902 HFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK----LEGPVCSSM 957
           +  CS +P D Y+   P+        P    +Y+  L+LP + P         GP   S 
Sbjct: 586 NHLCSLIPHDAYT--PPQL-------PKYSGDYAVMLELPSSLPLPIDRLFFSGPERRSK 636

Query: 958 RLAQQAVCLAACKKLHEMGAFTDMLLP---DKGSGEQ 991
           R A++AV   A K+LH +  F D LLP    KG G +
Sbjct: 637 REAKRAVAFLAVKELHRLDVFDDYLLPATSSKGRGTE 673



 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 249/550 (45%), Gaps = 74/550 (13%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFP--RKEGYLGPLEYSSYADYYKQKYGVE----LI 1292
            ++ +   G+   + +IRY++T  S+ P   KE      EY +Y DY+ Q++  +     +
Sbjct: 824  VMNSNQYGRALVLRNIRYDLTPLSTTPPGSKES-----EYPTYRDYFVQRWTRKKREAFV 878

Query: 1293 FKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLV 1352
             +   LI    +  C + +    EH  + +    +I      + +P + C        + 
Sbjct: 879  PENSFLIEATYLPRCPSSVYRVREHLIDLDLCKRQIARAG--LLVPKDACRRVHFSEDVY 936

Query: 1353 RGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDA 1411
            R    LP + RRV  +  A Q + ++  P+ A  +L EA T  +   TF  +R E LGD+
Sbjct: 937  RAFLLLPKLCRRVTDVYRARQERIELGLPMIAEDLLIEASTLPTTSLTFNNQRLETLGDS 996

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
             LK   +  +  KYP +HEGQL+ +RQ  VSN  L   A    L+ ++ ++      W  
Sbjct: 997  VLKLGSTVHIMNKYPHRHEGQLSHLRQNSVSNRTLLSRAKEIELERFLNSESHNLHFWRY 1056

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
               +P      +D DS+L    +S                              + R   
Sbjct: 1057 --TVP------EDTDSTLCRIRRS------------------------------TRREFP 1078

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSRPACVPESVLRSV 1590
             ++L D +EA +G  +V GG D A      +G+      P  +    RP   P   L   
Sbjct: 1079 RRSLQDCMEATLGAAFVTGGIDMALQAGTALGLSFGGPIPWSLKYSRRPESSPAPHL--- 1135

Query: 1591 DFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
             F  L+++L  +F    LLVEA TH S  +S  S YQRLEF+GDAV+D ++  +L+  + 
Sbjct: 1136 -FADLQESLCYEFHRGDLLVEAATHPSFATSASSSYQRLEFLGDAVIDLVVLNYLYRRFP 1194

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVK----HK-LHVHLRHGSSALDRQIRDFVKEVLEEL 1705
                G+L+  R+ AV     A ++V+    HK L V+    SSA++R +       +E++
Sbjct: 1195 QANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELSSAINRHVPILESTSVEDI 1254

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD----TSVVWQVFQPLLDPMVTPE 1761
            +  G+          PK L D++ES+ GAIF+DS  +     SVV  +   +L+ +++P 
Sbjct: 1255 INKGWKY------DPPKALSDVLESVVGAIFVDSAYNFEKVASVVELIMSDVLE-LLSP- 1306

Query: 1762 TLPMHPVREL 1771
             LP  PV EL
Sbjct: 1307 NLPKDPVSEL 1316


>gi|356555908|ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 285

 Score =  162 bits (409), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/146 (52%), Positives = 106/146 (72%), Gaps = 1/146 (0%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           A  YQL+ L+ A ++NTI +LETG+GKTLIAV+L+RS  + L R+    ++VFLVP+V L
Sbjct: 26  AGSYQLEALDNAIRENTIVYLETGSGKTLIAVMLLRSYAHHL-RKPSPQISVFLVPQVVL 84

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAE +++ T   VG + G+MG DFWDA  W++E +  +V VMT  ILLN LRHS +K
Sbjct: 85  VSQQAEAVKKHTDLKVGMFWGDMGVDFWDATTWKQEVEKHEVFVMTPAILLNCLRHSFLK 144

Query: 424 MEAINLLILDECHHAVKKHPYSLVMS 449
           +  I +LI+DECHHA  KHPY+ +M+
Sbjct: 145 LNLIKVLIMDECHHARGKHPYACIMT 170



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 5/114 (4%)

Query: 1723 VLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGL 1782
            VLGDI+ES+AGAI +DS  +  VVWQ  +PLL+P+VTPETL +HP+REL E CQ+++  +
Sbjct: 171  VLGDIIESLAGAILVDSRFNKEVVWQSIRPLLEPLVTPETLKLHPIRELNELCQKRSYKI 230

Query: 1783 EYK-ASRSGNLAT--VEVYIDGV--QVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
              +  SR   +    +E+  DGV  +        +  A+K+A +  L  LKE+E
Sbjct: 231  VLEDVSRKDGVTNYRMELEADGVIHEYEYTGPALRDTAKKIACKEILNSLKEEE 284


>gi|312376926|gb|EFR23879.1| hypothetical protein AND_11908 [Anopheles darlingi]
          Length = 994

 Score =  161 bits (408), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 174/384 (45%), Gaps = 86/384 (22%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV----------------------- 1566
            +  K++AD VEALIG Y +E G   A   M W+GI+V                       
Sbjct: 603  IPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIRSNNGVPKAINTGNTQELVQ 662

Query: 1567 ----ESDPEEVG---CPSRPACVPESVLRSVD----------------FHALEDALKIKF 1603
                  D  E G    P  P          ++                F   E +L   F
Sbjct: 663  YGRGTVDITEYGHWVAPPSPMVRANITFGGLEAGAHATARELNRLLEGFEVFERSLGYHF 722

Query: 1604 KDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRA 1662
            +DR  L++A+THAS  P+    CYQRLEF+GDA+LD+LIT+HL+       PG LTDLR+
Sbjct: 723  QDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRS 782

Query: 1663 AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFV--------KEVLEELLKPGFNS-- 1712
            A VNN  FA +AV+H  H +  H S  L   I  FV        +   EE   P  +   
Sbjct: 783  ALVNNTIFAALAVRHGFHRYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYYLPDEDDDM 842

Query: 1713 --------------------FGLG---DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
                                 G G   D + PK LGD+ ESIAGAIFLDSG   + VW+V
Sbjct: 843  LAADGGFGGGFGEIEGGQALMGSGEAEDVEVPKALGDVFESIAGAIFLDSGMSLNTVWKV 902

Query: 1750 FQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGN--LATVEVYIDGVQVG 1805
            ++ ++ P +     ++P  P+REL E   + A+  + +    G     TVEV+  G   G
Sbjct: 903  YRKMMGPEIEKFSSSVPKSPIRELLEMEPETAKFGKPEKLADGRRVRVTVEVFGKGTFRG 962

Query: 1806 VAQNPQKKMAQKLAARNALAVLKE 1829
            + +N   ++A+  AA+ AL  LK+
Sbjct: 963  IGRN--YRIAKCTAAKCALRQLKK 984



 Score = 68.2 bits (165), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  IL+ALT ++  +    ER E +GD++LK+ ++ +L+ +Y   HEG+L+ +R + 
Sbjct: 375  PSPAI-ILQALTMSNANDGINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 433

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAP-SRWAAP 1472
            VSNL LY+    K L   + A +F P   W  P
Sbjct: 434  VSNLNLYRLGRRKRLGDCMIAAKFEPHDNWLPP 466



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 35/185 (18%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +L+A+T AS      T CY+R E LGDA L ++++R L+    Q   G LT +R  +V
Sbjct: 726  SYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQHSPGALTDLRSALV 785

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N +    A+  G   Y            +PG+  V D   +        QE      ++
Sbjct: 786  NNTIFAALAVRHGFHRYFLH--------LSPGLQEVIDRFVR------IQQENG---HRI 828

Query: 1502 GTDKNYNEYEDDDMEDGE---------------LEGDSSSYRVLSSKTLADVVEALIGVY 1546
              ++ Y   EDDDM   +               L G   +  V   K L DV E++ G  
Sbjct: 829  TEEEYYLPDEDDDMLAADGGFGGGFGEIEGGQALMGSGEAEDVEVPKALGDVFESIAGAI 888

Query: 1547 YVEGG 1551
            +++ G
Sbjct: 889  FLDSG 893



 Score = 46.2 bits (108), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             ++++A+T  S  + G++  +RLE +GD+ L + IT +L+  Y N+  G+L+ LR+  V+
Sbjct: 378  AIILQALT-MSNANDGINL-ERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQVS 435

Query: 1667 NENFARVAVKHKL 1679
            N N  R+  + +L
Sbjct: 436  NLNLYRLGRRKRL 448


>gi|189205613|ref|XP_001939141.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975234|gb|EDU41860.1| endoribonuclease dcr-1 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1572

 Score =  161 bits (407), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 134/237 (56%), Gaps = 8/237 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNK---KMLAVFLVPK 360
           R YQ ++ ++AK +N IA L+TG+GKT IA LL+R + + +L+ + K     +A FLV  
Sbjct: 118 RDYQTELFQRAKVENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGDAPKMAFFLVDS 177

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ+ V+R      V   CG MG   W  + WQ  FDT  V+V TA++L+  + HS
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVVVCTAEVLVQCMMHS 237

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I M  INLLI DE HHA   HPY+ +M ++Y H     KRP +FGMTASPV+ KG+S+ 
Sbjct: 238 FITMSQINLLIFDEAHHAKSNHPYARLMKDYYTHELDLSKRPRIFGMTASPVDTKGLSAD 297

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLK 534
                   +LE  L + + T  +       +  P E V  Y +    +   LH+++K
Sbjct: 298 -HIKQAASDLEKLLYAKIATTTESTLASNSISRPDEEVAVYTRLQDEFETPLHQKIK 353



 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 245/578 (42%), Gaps = 91/578 (15%)

Query: 1235 LEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY----GVE 1290
            ++   V   + G+R+YV  +   +  +   P+           S  DY   K+     + 
Sbjct: 920  IDQYFVDPMNGGRRYYVNRLAPHLKPQDPVPKGIPRQNHKFMDSILDYSDSKWLKTRDIS 979

Query: 1291 LIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGS 1350
                 QP++    + + +N L+ R E  ++++GE +++  KTY     PE   I  L   
Sbjct: 980  KWNPSQPVLEVEKIPFRRNHLA-RVE--DKEKGELDDL--KTYVC---PEPLLISNLATP 1031

Query: 1351 LVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS------CQETFC--- 1401
             V     LP+I+ R ES L+A+     ++  V  +  LEALT  S       +E      
Sbjct: 1032 FVVMCYVLPAIIHRFESYLIALDACGVLDLKVSPALALEALTKDSENSEEHGEEKINFKS 1091

Query: 1402 -----YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG-- 1454
                 YER E LGD +LK   S  +F++ P ++E +    R +M+ N  L + A+ K   
Sbjct: 1092 GMGPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKV 1151

Query: 1455 -----------LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
                       L +YI+ D F+   W   G+                         KL  
Sbjct: 1152 TSVDGTERDIKLYNYIRTDSFSRRTWYPDGM-------------------------KLLR 1186

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE---GGKDAA---NH 1557
             K  N+ EDD ++     GD         K++ADV EA IG  + E   GG+  A   + 
Sbjct: 1187 GKGVNKSEDDWLKLTHNLGD---------KSIADVCEAFIGAAFQEHYKGGRWNAADWDE 1237

Query: 1558 LMKWIGIQVESDPEEVGCPSRPAC---VPESVLRSVDFHALEDALKIK------FKDRGL 1608
             +K + +   S   E+   +       +P+  +       L+ A KI+      FK   L
Sbjct: 1238 TVKAVKLFANSPDHEMSKWTDYYAAYQMPKYQIADATAAMLDMACKIEAKHPYHFKYPRL 1297

Query: 1609 LVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            L  A  H S P     +  YQRLEF+GD++LD     HL++ Y +  P  LT+ +   V+
Sbjct: 1298 LRSAFAHPSYPYIYENIPNYQRLEFLGDSLLDMAFITHLYYKYPDKDPQWLTEHKTPMVS 1357

Query: 1667 NENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLG 1725
            N+    V VK   HV+++  ++ L  QIRD+V E  E E        + +   + PK L 
Sbjct: 1358 NKFLGAVCVKLGWHVYIKQNTAILTSQIRDYVLEAQEAEREASSAVDYWVTISEPPKCLA 1417

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
            D++E+   AIF+D+  D SVV   F   L P     TL
Sbjct: 1418 DVIEAYTAAIFVDAEFDFSVVQDFFNMHLKPFFEDMTL 1455



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 167/302 (55%), Gaps = 15/302 (4%)

Query: 696 AVADGKVTPKVQSLIKILLKY-QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
            ++D  V+ KV  L   L +Y + +++ R I+FVE+   A +L  +FA L   S ++ + 
Sbjct: 440 TLSDKDVSSKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGG-SNLRCSV 498

Query: 755 LIGHNNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
           L+G NN    +   ++    T+AKFR G +  L ATSVAEEGLDI QCN+V+RFDL +T+
Sbjct: 499 LVGVNNRISEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYRTM 558

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLR---KEAIERTDLSHL-K 867
           +AY+QSRGRAR   S Y+ M+E GN  H   + + +  E+ +R   ++  +   ++   K
Sbjct: 559 IAYVQSRGRARHRNSKYLHMLEDGNHDHRERIMDVKQDEQVMRNFCRDLPQDRQINEFDK 618

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIM---- 922
           D + L++ +      + V   GA +S  S++ +++ + + LP  DR ++L+P +++    
Sbjct: 619 DGTDLLTFEDKLFPTF-VTKPGAKLSYRSSLSILNHFVATLPGPDRQTMLQPTYVISSEV 677

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
           +R+        + C++ LP  +P   + G V     +A+ +     C +L++ G   D L
Sbjct: 678 QRNVLDPQRRGFVCEVILPEYSPVTSIIGDVQGKKTIAKCSAAFKTCLQLYKKGYLDDNL 737

Query: 983 LP 984
           LP
Sbjct: 738 LP 739


>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
          Length = 1347

 Score =  161 bits (407), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 198/391 (50%), Gaps = 54/391 (13%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P PA  IL+ALT     +    ER E++GD++LK  V+   + +    +EG+LT  R ++
Sbjct: 982  PSPAD-ILKALTPLYITDIVDSERLEVIGDSFLKIAVTLHFYQELISSNEGELTTRRCRI 1040

Query: 1441 VSNLVLYQYALSKGLQSYIQADRF-APSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAED 1499
            +SN+ L Q+A+ KG+   ++  +F     +  PG                  QE+++   
Sbjct: 1041 ISNMSLLQHAVPKGIHEMVECVKFRVRVNFVPPGA-----------------QERALLSG 1083

Query: 1500 K-LGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL 1558
            + L  D              E+   S  Y+   SK  AD VEALIGVY  + G   A   
Sbjct: 1084 RCLKADV------------AEMSRRSQYYK---SKMCADSVEALIGVYLEKCGPVGALEY 1128

Query: 1559 MKWIGIQVESDPEEVGCPSRPACVPESVLRSV---------DFHALEDALKIKFKDRGLL 1609
            ++W+ I +    E          +PE +             +   +++ L   F++  L+
Sbjct: 1129 LRWLDIPLGRYNEGDFLDRFELPLPEPLREDKKADVERWRKEILTVQETLGYIFQNELLV 1188

Query: 1610 VEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            +EAITH S R +     Y+RLEF+GDAV+D+LI+K+++ + ++L PG+LTD+RA+ V+N 
Sbjct: 1189 LEAITHKSYRYNRLTRSYERLEFLGDAVIDYLISKYIYTADSDLNPGQLTDVRASLVSNN 1248

Query: 1669 NFARVAVKHKLHVHLRHGSSALDRQIRDFVK--------EVLEELL-KPGFNSFGLGDCK 1719
             FA + V +KLH  ++H S  L +    FV+        ++L  ++ +   +   L    
Sbjct: 1249 TFAAIIVDNKLHTVMQHHSPLLLKLTNRFVEYRETEKRIDILAHMMGEEDEDLEDLEQVD 1308

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
             PK LGD++ES+ GA+FLDSG+D  VVW V 
Sbjct: 1309 IPKPLGDLMESLMGAVFLDSGKDLDVVWAVL 1339



 Score =  147 bits (370), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 152/302 (50%), Gaps = 22/302 (7%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           E  AR +QL++ E A K+N I  L TG GKTL++ LLI+ + +  +   +N    +VFL 
Sbjct: 23  ELAARHFQLELFELAVKQNVIICLGTGTGKTLVSALLIKELLHQTRERLENGGRRSVFLA 82

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P VPLV QQ   ++      V  + G M  D W   +W +EFD   VLVMT  IL NIL 
Sbjct: 83  PTVPLVQQQTAYLKRHLNASVASFVGAMRVDDWTGTQWWQEFDQHNVLVMTPTILNNILN 142

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
            + + M  INLLI DECH A  K PY  +M   Y +T    RP + G+TAS +N +  +S
Sbjct: 143 ANFVSMANINLLIFDECHCATGKDPYVQIMQNHYMSTHPTSRPRILGLTASVLNKRVKTS 202

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY--DKAASLWSLHEQ---- 532
           ++    +I  LE KL + + T     +   ++  P E++V+Y      SL + H +    
Sbjct: 203 EM--MDRIEELECKLGANLVTAFSAVD---YITRPREIIVKYAHRNERSLVTPHPKATAW 257

Query: 533 LKQMEVAV-----EEAAQSSSRRSKWQFMGARDAGAK----EELRQVYGVSERTESDGAA 583
           + +M  AV      E  +   R+     +    A  +    +ELRQ Y ++ERT     A
Sbjct: 258 VNEMLAAVGPFGCLEVIRRKIRQLNNMILSEIAAEHRLREAKELRQAYEIAERTICSWGA 317

Query: 584 NL 585
            L
Sbjct: 318 PL 319



 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 16/238 (6%)

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
           +  +  FR  ++ LL+ATSV EEG+DI  CN+V+R+D  K + +Y+QSRGRAR   S Y+
Sbjct: 410 ERVLQDFRKRQLNLLIATSVIEEGVDIPACNLVLRYDPPKNMRSYVQSRGRARGNPSMYL 469

Query: 830 LM--IERGNLSHATFLRNARNSEETLR------KEAIERTDLS-HLKDTSRLISVDAVPG 880
           L   ++   + H    +      + LR      +  IE + +  HL + S L ++     
Sbjct: 470 LFADVKAAPVIHQDIFQFKNIEFQLLRYCNAHHRTPIESSQMFLHLYNRSHLSNI----Y 525

Query: 881 TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQL 940
           +     +  A+++  +A  ++ +YC  L SDRY++ +P+++ E    P       C + L
Sbjct: 526 SKVHPNNCRAMITPFAARQILQWYCDSLGSDRYTLQKPDYVYETAASPSKLVR--CGIHL 583

Query: 941 PCNAPFEKL-EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQ 997
           P  +P + +  G    S   A+ +  +    +L+ +G  T+ LLP K     +  +D+
Sbjct: 584 PRQSPLQMIVYGAWEESSLTARTSAAINVLSRLYSLGELTEHLLPRKRKVALEVTIDE 641


>gi|238578670|ref|XP_002388796.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
 gi|215450407|gb|EEB89726.1| hypothetical protein MPER_12144 [Moniliophthora perniciosa FA553]
          Length = 463

 Score =  160 bits (406), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 230/512 (44%), Gaps = 71/512 (13%)

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
           AQI LN+L HS+  +  ++LL+ DECHH  K HPY+ +M E Y   S E RP VFG+TAS
Sbjct: 7   AQIFLNLLTHSLWGLNKVSLLVFDECHHTRKNHPYNGIMRE-YMLLSPEDRPKVFGLTAS 65

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWS 528
           P+      +  +  + +  L++ +D+ V  + D   EL +H P P EV+ EY        
Sbjct: 66  PIQ-----NAKNPLVSLNELQTNMDARVIGVLDHVDELAQHTPKPVEVIQEY-------- 112

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
                    +++E++  S    S W  +   D      + + +   ER            
Sbjct: 113 --------SISLEQS--SYPEPSLWSCINVFDRATLTAIAECWPDIERR----------- 151

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
               +  LG LG +CA   +      ++N   A YQ D+    S+   +V  +    +E 
Sbjct: 152 ---YHVTLGNLGPYCA---SLYLFMEMKNIISAFYQPDLN--PSFSDDLVVHVPHTTLED 203

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
                D  +VD                 L+D            ++ + V     TPK+++
Sbjct: 204 LPEHFD-DIVDI----------------LVDYEQFYSVRSDYFLLPSTVPLEWCTPKIKT 246

Query: 709 LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE--MR 765
           L+ IL+ + +T  F+ IIFVE+   A  L  V   +  L   VK     G+ N  E  +R
Sbjct: 247 LVDILVAH-YTPTFQGIIFVEQRQVATCLAGVLPYIEELKGLVKCGDFFGNVNDVEESLR 305

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
                          +T ++ATSVAEEGLD   C++VIRFD  + ++AY+QSRGRAR   
Sbjct: 306 GTLKCSRGPDVSSPNITAVIATSVAEEGLDFPACDIVIRFDPLQHMVAYVQSRGRARNKI 365

Query: 826 SDYILMIERGNL----SHATFLRNARNSEE--TLRKEAIERTDLSHLKDTSRLISVDAVP 879
           S +I+M+  G++     +  FL+   + ++   + +   +  D     +    + +D   
Sbjct: 366 SKFIIMLPEGDVISRAKYEAFLQAEVHLKDIYNVSRPPDDAMDEDSDSEADEEVELDTQD 425

Query: 880 GTVYQVESTGAVVSLNSAVGLIHFYCSQLPSD 911
              Y V  T A ++ ++++ L++  C+ +P D
Sbjct: 426 RERYVVPHTSAFINYDNSIALLNHLCALIPRD 457


>gi|115478498|ref|NP_001062844.1| Os09g0315100 [Oryza sativa Japonica Group]
 gi|113631077|dbj|BAF24758.1| Os09g0315100, partial [Oryza sativa Japonica Group]
          Length = 245

 Score =  160 bits (404), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 140/262 (53%), Gaps = 35/262 (13%)

Query: 1386 KILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
            +ILEALT   CQE F  E  E LGD++LK+V +R LF +Y  +HEG LT+M++ ++SN  
Sbjct: 17   QILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAA 76

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            L Q A S  L  YI A+ F P  W    ++P  D D +      F     +A + + + +
Sbjct: 77   LCQLACSSNLVGYIHAEEFNPRDW----IIPCLDYDERGNKKISF-----LAPNGMYSQR 127

Query: 1506 NYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
              +                     + SK +AD VEALIG Y    G+ AA  LMK +G+ 
Sbjct: 128  KMS---------------------IKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMN 166

Query: 1566 VESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG-VS 1624
            +E   E +    + +   E     +D  +LE  L  KF D  LL+EA+TH S  +SG  S
Sbjct: 167  IEFHTE-IPVERKISMKAEEF---IDVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTS 222

Query: 1625 CYQRLEFVGDAVLDHLITKHLF 1646
            CYQRLEF+GDA+LDHL T++ +
Sbjct: 223  CYQRLEFLGDAILDHLFTEYYY 244


>gi|347440704|emb|CCD33625.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 921

 Score =  160 bits (404), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 130/231 (56%), Gaps = 21/231 (9%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM-----LAVF 356
           E  R YQL++ E+AKK+N IA L+TG+GKT IAVLL+R I  D + +++ +     ++ F
Sbjct: 509 ESPRDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLRWII-DQELEDRAIGKPHRVSFF 567

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           LV  V L +QQ  V+R          CG MG D  D  +W++  DT  V+V TA+IL   
Sbjct: 568 LVDSVTLCHQQHSVLRNNLNQPTDMICGLMGTDLSDHIKWKKRLDTNMVIVCTAEILRQC 627

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPV--- 471
           L HS + M  INLLI DE HHA K HPY+ ++ +FY   +++    P +FGMTASPV   
Sbjct: 628 LHHSFVTMAQINLLIFDEAHHAKKDHPYARIIKDFYRNDTEKDIALPKIFGMTASPVDAR 687

Query: 472 -NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
            N+K  + +         LE  L S +CT +D   L+  +    E +  YD
Sbjct: 688 DNVKKAAEE---------LEGLLHSQICTAEDPSLLQYSIKGKPETLAYYD 729


>gi|330913942|ref|XP_003296428.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
 gi|311331414|gb|EFQ95479.1| hypothetical protein PTT_06534 [Pyrenophora teres f. teres 0-1]
          Length = 1572

 Score =  160 bits (404), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 128/223 (57%), Gaps = 10/223 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNK---KMLAVFLVPK 360
           R YQ ++ ++AK +N IA L+TG+GKT IA LL+R + + +L+ + K     +A FLV  
Sbjct: 118 RDYQTELFQRAKGENVIAVLDTGSGKTHIATLLLRHVLDAELEHRAKGGAPKMAFFLVDS 177

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ+ V+R      V   CG MG   W  + WQ  FDT  V+V TA++L+  + HS
Sbjct: 178 VNLVFQQSNVLRCGLDQNVEGICGSMGASLWSRKTWQTYFDTNMVIVCTAEVLVQCMMHS 237

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQ 479
            I M  INLLI DE HHA   HPY+ +M ++Y H     KRP +FGMTASPV+ KG+S+ 
Sbjct: 238 FITMSQINLLIFDEAHHAKSNHPYARLMKDYYAHELDLSKRPRIFGMTASPVDTKGLSAD 297

Query: 480 VDCAIKIC--NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
               IK    +LE  L + + T  +       +  P E V  Y
Sbjct: 298 ---HIKQAAGDLEKLLYAKIATTTESTLASNSISRPDEEVAIY 337



 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 245/574 (42%), Gaps = 91/574 (15%)

Query: 1239 IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY----GVELIFK 1294
             V   + G+R+YV  +   +  +   P+           S  DY   K+     +     
Sbjct: 924  FVDPMNGGRRYYVNRLAPHLKPQDPVPKGIPRQNHKFMDSILDYSDSKWLKTRDISKWNP 983

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
             QP++    + + +N L+ R E  ++++GE +++  KTY     PE   +  L    V  
Sbjct: 984  SQPVLEVEKIPFRRNHLA-RIE--DKEKGELDDL--KTYVC---PEPLLVSNLATPFVVM 1035

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS------CQETFC------- 1401
               LP+I+ R ES L+A+   + ++  V  +  LEALT  S       +E          
Sbjct: 1036 CYVLPAIIHRFESYLIALDACEVLDLKVSPALALEALTKDSENSEEHGEEKINFKSGMGP 1095

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG------ 1454
             YER E LGD +LK   S  +F++ P ++E +    R +M+ N  L + A+ K       
Sbjct: 1096 NYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLLETAIGKKKVTSAD 1155

Query: 1455 -------LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
                   L +YI+ D F+   W   G+                         KL   K  
Sbjct: 1156 GTERDIQLYNYIRTDSFSRRTWYPEGM-------------------------KLLRGKGV 1190

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE---GGKDAA---NHLMKW 1561
            N+ EDD ++     GD         K++ADV EA IG  + E   GG+  A   +  +K 
Sbjct: 1191 NKSEDDWLKLTHNLGD---------KSIADVCEAFIGAAFQEHYKGGRWNAADWDETVKA 1241

Query: 1562 IGIQVESDPEEVGCPSRPAC---VPESVLRSVDFHALEDALKIK------FKDRGLLVEA 1612
            + +   S   E+   +       +P+  +       L+ A KI+      FK   LL  A
Sbjct: 1242 VKLFANSPDHEMSNWADYYAAYQMPKYQIADATAAMLDMARKIEAKHPYHFKYPRLLRSA 1301

Query: 1613 ITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
              H S P     +  YQRLEF+GD++LD     HL++ Y +  P  LT+ +   V+N+  
Sbjct: 1302 FAHPSYPYIYENIPNYQRLEFLGDSLLDMAFITHLYYKYPDKDPQWLTEHKTPMVSNKFL 1361

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE-ELLKPGFNSFGLGDCKAPKVLGDIVE 1729
              V VK   HV+++  ++ L  QIRD+V E  E E    G   + +   + PK L D++E
Sbjct: 1362 GAVCVKLGWHVYIKQNTAILTSQIRDYVLEAQEAERESGGAVDYWVTISEPPKCLADVIE 1421

Query: 1730 SIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
            +   A+F+D+  D SVV   F   L P     TL
Sbjct: 1422 AYTAALFVDAEFDFSVVQDFFNLHLKPFFEDMTL 1455



 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 19/304 (6%)

Query: 696 AVADGKVTPKVQSLIKILLKY-QHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFVKS 752
            ++D  V+ KV  L   L +Y + +++ R I+FVE+   A +L  +FA L  P+L   + 
Sbjct: 440 TLSDKDVSSKVLKLHYWLHRYYERSDEARCIVFVEQRQTARLLQLIFASLGGPNL---RC 496

Query: 753 ASLIGHNNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           + L+G NN    +   ++    T+AKFR G +  L ATSVAEEGLDI QCN+V+RFDL +
Sbjct: 497 SVLVGVNNRINEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDLYR 556

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLR---KEAIERTDLSHL 866
           T++AY+QSRGRAR   S Y+ M+E GN  H   + + +  E+ +R   ++  +   ++  
Sbjct: 557 TMIAYVQSRGRARHRNSKYLHMLEEGNHDHRERIMDVKRDEQVMRNFCRDLPQDRQINEF 616

Query: 867 -KDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEFIM-- 922
            KD+  L+  +     ++ V   GA +S  S++ +++ + + LP  DR ++L+P +++  
Sbjct: 617 DKDSMNLLMFEDKSFPIF-VTKPGAKLSYRSSLSILNHFVATLPGPDRQTLLQPTYVISS 675

Query: 923 ERHEKPGGPTE--YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
           E       P    + C++ LP  +P   + G +     +A+ +     C +L++ G   D
Sbjct: 676 EFQHNAIDPQRRGFVCEVILPEYSPVTSIIGDIQGKKTIAKCSAAFKTCLQLYKKGYLDD 735

Query: 981 MLLP 984
            LLP
Sbjct: 736 NLLP 739


>gi|115462923|ref|NP_001055061.1| Os05g0271300 [Oryza sativa Japonica Group]
 gi|50878449|gb|AAT85223.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|55908895|gb|AAV67838.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578612|dbj|BAF16975.1| Os05g0271300 [Oryza sativa Japonica Group]
          Length = 344

 Score =  159 bits (403), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 171/347 (49%), Gaps = 58/347 (16%)

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            DP E+  P   A   E+  R      +E  L+ +F+D  LL EA+TH S     VS YQR
Sbjct: 14   DPVELPPPGFVADRAEAAAR------VERLLRYQFRDGRLLEEALTHQSFADDAVS-YQR 66

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEFVGD+ L    +  L+ +   L PG L+ LRAA ++ E  ARVAV+H L+  LR    
Sbjct: 67   LEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCP 126

Query: 1689 ALDRQIRDFVKEVLEELLKP----GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
             LD  +  F++ V +E   P        +G    KAPKVL DIVE+IA A+++D   D  
Sbjct: 127  RLDLLVGQFIETVKQE---PEDDLSTVPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLE 183

Query: 1745 VVWQ---------------------------------VFQPLLDPMVTPETLPMHPVREL 1771
             +W+                                 V + L +P++T ET+   PV  L
Sbjct: 184  KLWKRLTWLHGLQEIRWTVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTML 243

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA---LAVLK 1828
             E CQ+  +  ++K  + G +  V V++ G  VG+  + QK +A+  AAR+A   LA  K
Sbjct: 244  HELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAK 303

Query: 1829 EK--ETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            ++   T      GDE G+ R+       +Q LN+ C R+NWP P+++
Sbjct: 304  KQVLTTGVGNGLGDEIGELRE------CKQKLNEQCSRQNWPKPIFK 344


>gi|451856503|gb|EMD69794.1| hypothetical protein COCSADRAFT_341850 [Cochliobolus sativus
           ND90Pr]
          Length = 1575

 Score =  159 bits (403), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 133/239 (55%), Gaps = 12/239 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM-----LAVFLVP 359
           R YQ ++ ++AK +N IA L+TG+GKT IA LL+R +  D++  ++       +A FLV 
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVL-DMELDHRARGGIPRMAFFLVD 176

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            V LV+QQA V+R      V   CG MG   W    WQ  FD    +V TA++L+  + H
Sbjct: 177 SVNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMAIVCTAEVLVQCMMH 236

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSS 478
           S I M  INLLI DE HHA   HPY+ +M ++Y   T   +RP +FGMTASPV+ KG+S+
Sbjct: 237 SFIAMSQINLLIFDEAHHAKSNHPYARLMKDYYLQETDVSQRPRIFGMTASPVDTKGLSA 296

Query: 479 -QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLK 534
             +  A +  NLE  L S + T  +       +  P E V  Y +    +   LH+++K
Sbjct: 297 DHIKEAAR--NLEKLLHSKIATTTESTLASNSISRPDEEVAMYPRLREEYETPLHKKIK 353



 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 170/308 (55%), Gaps = 23/308 (7%)

Query: 694 GAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFV 750
              ++D  ++ KVQ L   L L Y+ +++ R I+FVE+   A +L  +F+++  P L   
Sbjct: 437 ACTLSDQDLSSKVQKLHYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHL--- 493

Query: 751 KSASLIGHNNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           + + L+G N+ +  +   ++    T+AKFR G +  L ATSVAEEGLDI QCN+V+RFDL
Sbjct: 494 RCSVLVGVNSREHEQNISLRNQIITVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDL 553

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHL- 866
            +T++AY+QSRGRAR   S Y+ MIE GN  H   + + +  E+ +R+   E     H+ 
Sbjct: 554 YRTMIAYVQSRGRARHRNSKYLHMIEEGNHDHRERVMDVKLDEQVMRQFCRELPQDRHID 613

Query: 867 ---KDTSRLISVD--AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEF 920
               D+  L++ +    P  + ++   GA +S  S++ +++ + + LP  DR ++L+P +
Sbjct: 614 EYDNDSMDLLTFEDQLYPSFITKL---GAKLSFRSSLAILNHFVATLPGPDRQTMLQPTY 670

Query: 921 IMERHEKPGG--PTE--YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
           ++       G  P    +  ++ LP ++P     G V S   +A+ +    AC +L++ G
Sbjct: 671 VVCPDLNYDGLDPQRRGFVSEVILPEHSPVNTTIGDVQSKKAIAKCSAAYKACLELYKKG 730

Query: 977 AFTDMLLP 984
              D LLP
Sbjct: 731 YLDDNLLP 738



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 233/586 (39%), Gaps = 104/586 (17%)

Query: 1234 DLEGR-IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY----YKQKYG 1288
            DL  R  V   + G+R+Y E     +  +   P+     G    SS  DY    + +   
Sbjct: 917  DLINRYFVDPGNGGRRYYSERFAPHLKPQDPVPKGLARQGHKFMSSILDYSDSTWTRSRN 976

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            +    + QP+++   +   +N L+ R E  E+ E    +        ++ PE   I  L 
Sbjct: 977  ISKWNQSQPVLQAEKIPLRRNQLA-RIEDKEKGEFGNLK-------AYICPEPFQISNLA 1028

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQE--------TF 1400
               V     LP+I+ R ES L+A++  + +N  V  +  LE+LT  S            F
Sbjct: 1029 TPFVVMCYVLPAIIHRFESYLIALEACNVLNLKVNPALALESLTKDSENSEEHDEEKINF 1088

Query: 1401 ------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
                   YER E LGD +LK   S  +F++ P ++E +    R +M+ N  L + A+ K 
Sbjct: 1089 KSGMGPNYERLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRRMEMLCNKNLMETAVGKK 1148

Query: 1455 -------------LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
                         L  YI+ + F+   W   G+                         KL
Sbjct: 1149 KVVSAEGTEQDLQLYKYIRTESFSRRTWYPEGL-------------------------KL 1183

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE---GG------- 1551
               K  N+ +DD ++     GD         K++ADV EA IG    E   GG       
Sbjct: 1184 LKGKGANKSQDDWLKLTHNLGD---------KSIADVCEAFIGAALQEHYTGGLWKPTDW 1234

Query: 1552 ----------KDAANHLM-KWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALK 1600
                       ++ +H M KW      SD  E     +      S         +E    
Sbjct: 1235 DEAVKAVKLFANSPDHTMSKW------SDYYEAYQKPKYQTADASAAMLDMAQKIEMKHP 1288

Query: 1601 IKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
              FK   LL  A  H S P     +  YQRLEF GDA+LD     HL+F Y +  P  LT
Sbjct: 1289 YHFKYPRLLRSAFAHPSYPYMYENIPSYQRLEFAGDALLDMAFITHLYFKYPDKDPHWLT 1348

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN-SFGLGD 1717
            + +   V+N+    V VK   HVH++  ++ L  QIRD+V E  E   + G    + +  
Sbjct: 1349 EHKTPMVSNKFLGAVCVKLGWHVHIKQNTATLTNQIRDYVLEAEEAEREAGGAVDYWVTI 1408

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL 1763
               PK L D++E+   +IF+DS  D  VV   F+  L P     TL
Sbjct: 1409 SDPPKCLADVIEAYVASIFVDSEFDFGVVQTFFEMHLKPFFLDMTL 1454


>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 1453

 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 131/229 (57%), Gaps = 9/229 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I+ LLI+ I    Q   +  + VFLVPKV LV
Sbjct: 15  RRYQEEIFVRAQQGNVIAALDTGSGKTFISTLLIKWI--SAQESTEHKITVFLVPKVALV 72

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ E I +QT   V  + G    D  D   W  +F+T  V VMTAQI LN+L HS   +
Sbjct: 73  QQQGEFIAKQTSLRVRMFSGATAHDMSDRGGWANDFETADVFVMTAQIFLNLLTHSHWSL 132

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
             + LL+ DECHH  K H Y+ +M E++  T++  RP VFGMTASP     + +  + A 
Sbjct: 133 SKVCLLVFDECHHTRKNHAYNGIMREYFQ-TAEGCRPKVFGMTASP-----IWNPRNAAE 186

Query: 485 KICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
            +  LE  LD+ V  +K+   EL  H P P E++  Y +A  ++  +++
Sbjct: 187 SLSTLEKNLDAKVIAVKEHVDELIGHSPRPEELIKTYRQAPEVYPEYQK 235



 Score =  148 bits (373), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 161/604 (26%), Positives = 251/604 (41%), Gaps = 70/604 (11%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVS 1305
            G    +  +R ++T  S+ P      G   + +Y DY+  KY  +      P I   G+ 
Sbjct: 814  GHPLLLRRMRPDVTPSSTPPAGSREAG---FPTYRDYWLHKYTRK---GHAPNISLDGIC 867

Query: 1306 YCKNLLSPRFEHSEEQEGE---GEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIM 1362
                +L      S   E +        D    V LP ELC    +P  + +    LP + 
Sbjct: 868  VEGIMLDRNNSCSYSLENDPLPSSASKDAGLTVILPIELCRWALIPRHVYQSFSILPELC 927

Query: 1363 RRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFL 1421
             R+  +  A +++  +  P     +L +A+T  S    F  +R E  GDA LK      L
Sbjct: 928  HRLTDVWRAHEVRTALKLPPIVDDLLVQAITLPSANAGFNNQRLETFGDAVLKLCAVVHL 987

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDED 1481
            + +YP +HEGQL  M++  ++N  L   AL  GL+ ++  +  +   W            
Sbjct: 988  YNRYPHRHEGQLDNMKRTAIANRTLLARALEHGLEEHLTPETQSIRLW----------RY 1037

Query: 1482 TKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEA 1541
               GD +LF                             +     + R    ++L D +EA
Sbjct: 1038 VVTGDEALF----------------------------AVRPCRRALRQYPRRSLQDCMEA 1069

Query: 1542 LIGVYYVEGGKDAANHLMKWIGIQVE-SDPEEVGCPSRPACVPESVLRSVDFHALEDALK 1600
            ++G  +  GG D A      +G+      P  V    R    P + L    F  L++ L 
Sbjct: 1070 ILGASFATGGIDMALRAGTALGLSFGGPTPWYVRYSGRLKEAPAAPL----FAGLQETLG 1125

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
              FK   LL+EAITH S  S+  S YQRLEF+GDA +D ++T++L+  + +   G+L+  
Sbjct: 1126 YTFKHGHLLLEAITHPSFRSTDCSSYQRLEFLGDAFIDMVVTEYLYRKFPSATSGQLSWA 1185

Query: 1661 RAAAVNNENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
            R+ AV    FA +AVK   LH  L   +  L   I   V  + E   +    +    D  
Sbjct: 1186 RSRAVCGPAFASIAVKRLALHKLLLINNVELSMAISKHVPILEEITDEEIIINGWKHD-- 1243

Query: 1720 APKVLGDIVESIAGAIFLDS----GRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE-- 1773
             PK L D++ES+ GA+F+D      +  ++   V + LL  +  P+ LP  PV EL    
Sbjct: 1244 PPKALSDVLESVLGALFVDCDYNYDKAAAITEMVLEDLLAAL-RPD-LPKDPVTELMVWV 1301

Query: 1774 -----RCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
                 RC    +G      R  +  +V V+ D +  G    P   MA+ LAA  A  VL 
Sbjct: 1302 AQSGCRCISFLKGQSRPEVRRYDCMSVLVH-DTIVAGPLAAPNLSMAKGLAAERAREVLA 1360

Query: 1829 EKET 1832
            + E+
Sbjct: 1361 DPES 1364



 Score =  145 bits (366), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 174/362 (48%), Gaps = 46/362 (12%)

Query: 690  DVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF 749
            D ++   +     +PKV+ L + L   ++T  F+ I+FVE+   A  L  +   +P L  
Sbjct: 345  DGVLPTPIPLSWCSPKVKVLAEELFS-RYTSTFQGIVFVEQRHIATCLASMLRRIPFLVH 403

Query: 750  -VKSASLIGHNNS-------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
             +K   L+GH +        + M     ++T+  FR+ R+ LLVATSVAEEGLD   C++
Sbjct: 404  TIKCEPLVGHGSGAVAKSHLKGMAMRNQRDTVQLFRERRLNLLVATSVAEEGLDFPACDL 463

Query: 802  VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT 861
            VIRFD  + ++ Y+QSRGRAR   S +I+M++ G+ + A        SE  L+K   +R 
Sbjct: 464  VIRFDPVQHMVGYLQSRGRARHKTSTFIIMVQEGSQAQAERYLEFLRSEPHLKKVYQQR- 522

Query: 862  DLSHLKDTSRLISVDAVPGTV-------YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
            DL            DA P          Y V STGA+++ N+A+ L++  CS +P DR++
Sbjct: 523  DLVPPDVEEEEDESDA-PDPFDLARRERYVVPSTGAILTYNTAISLLNHLCSLIPRDRFT 581

Query: 915  ILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK----LEGPVCSSMRLAQQAVCLAACK 970
             +           P    ++   + LP   P        EGP   S + A++A    A K
Sbjct: 582  PM---------HAPRYTGDFVATVTLPSTLPLPSNLLVYEGPPKRSKKEARRAAAFFAVK 632

Query: 971  KLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ----GEW 1026
             LH +  F D LLP K SG  Q   D++ +G P+           E V D+LQ      W
Sbjct: 633  SLHALNVFDDYLLPAKSSGAAQ---DEDSDGVPIKNV--------ESVPDMLQVPVCDPW 681

Query: 1027 IL 1028
            +L
Sbjct: 682  VL 683


>gi|218196456|gb|EEC78883.1| hypothetical protein OsI_19246 [Oryza sativa Indica Group]
 gi|222630918|gb|EEE63050.1| hypothetical protein OsJ_17858 [Oryza sativa Japonica Group]
          Length = 350

 Score =  159 bits (402), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 171/347 (49%), Gaps = 58/347 (16%)

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            DP E+  P   A   E+  R      +E  L+ +F+D  LL EA+TH S     VS YQR
Sbjct: 20   DPVELPPPGFVADRAEAAAR------VERLLRYQFRDGRLLEEALTHQSFADDAVS-YQR 72

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEFVGD+ L    +  L+ +   L PG L+ LRAA ++ E  ARVAV+H L+  LR    
Sbjct: 73   LEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCP 132

Query: 1689 ALDRQIRDFVKEVLEELLKP----GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTS 1744
             LD  +  F++ V +E   P        +G    KAPKVL DIVE+IA A+++D   D  
Sbjct: 133  RLDLLVGQFIETVKQE---PEDDLSTVPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLE 189

Query: 1745 VVWQ---------------------------------VFQPLLDPMVTPETLPMHPVREL 1771
             +W+                                 V + L +P++T ET+   PV  L
Sbjct: 190  KLWKRLTWLHGLQEIRWTVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTML 249

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA---LAVLK 1828
             E CQ+  +  ++K  + G +  V V++ G  VG+  + QK +A+  AAR+A   LA  K
Sbjct: 250  HELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAK 309

Query: 1829 EK--ETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYR 1873
            ++   T      GDE G+ R+       +Q LN+ C R+NWP P+++
Sbjct: 310  KQVLTTGVGNGLGDEIGELRE------CKQKLNEQCSRQNWPKPIFK 350


>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
          Length = 1378

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 178/681 (26%), Positives = 293/681 (43%), Gaps = 123/681 (18%)

Query: 341 ICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQR-WQR 398
           I  +L+R     +  FL P V L  Q  E ++     V +    G  G D W  QR W  
Sbjct: 26  ILAELERMKPGKIIWFLAPTVALCAQHHEYLQLNIPSVLIKMLIGADGVDRWTEQRQWDT 85

Query: 399 EFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-TSK 457
                +V+V + Q+LL+ L H  ++M  ++L+I DE H+ V K P + +M  FYH   S 
Sbjct: 86  VLKDVKVVVSSYQVLLDALTHGFVRMGRLSLIIFDEAHNCVNKAPGAKIMKSFYHPYKSI 145

Query: 458 EKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEV 516
              P + G++ASPV      S       + ++E  LD++ CT K  R +L   V +P   
Sbjct: 146 FPLPHILGLSASPVMRSSPQS-------LSDIEETLDAICCTPKIHRADLRLRVKLPLLS 198

Query: 517 VVEYD---------KAASLWSLHEQLKQME----VAVEEAAQSSSRRSKWQFMGARDAGA 563
           ++ Y            ASL  + + L   E    + ++ +    S+R   + + +    +
Sbjct: 199 IIYYTPESNIIVTKTVASLRKIVQSLNIFEDPYVLTLKRSDSEKSQRELAKVLKSFKTYS 258

Query: 564 KEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANY 623
           + +L+ +         D  +N I         L ELG W A                   
Sbjct: 259 QTQLKSI---------DKTSNEI--------ILVELGPWAA------------------- 282

Query: 624 QLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD----SENGFVEGGTNEIEEGELLD 679
                  + Y+S VV+         A+S KD  +V+    +E  ++     ++E      
Sbjct: 283 -------DYYISTVVTRYL-----KAMSAKDTFIVEDSPAAEKLYIAKALRQVE------ 324

Query: 680 SHVVSGGEHVDVIIGAAVAD-GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLP 738
                       I  + ++D GK++ KV+ L+ I+   Q    F AIIFV+      VL 
Sbjct: 325 ------------ISPSTLSDTGKISNKVEKLLGII--AQQKPPFSAIIFVQERATVSVLA 370

Query: 739 KVFAELP------SLSFVKSASLIGHNNSQ---EMRTFQMQETIAKFRDGRVTLLVATSV 789
            + +  P       +  +   SL G    Q    +   Q ++T++ F+ G++ +L+AT+V
Sbjct: 371 HLLSHHPLTKDRFKIGTMVGTSLNGKRTDQIGELVDVNQQKDTLSSFKRGKIDILIATNV 430

Query: 790 AEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNS 849
            EEG+D+  CN+VI F     + +++Q RGRAR+  S  IL+   G+   AT   N    
Sbjct: 431 LEEGIDVPACNLVICFSKPANLKSFVQRRGRARQQDSKLILLDASGD--KAT---NWHEL 485

Query: 850 EETLRKE-AIERTDLSHLK--DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCS 906
           E  +R+E   E  +L H+   +T+   S D     V ++ESTGA + L+SA+  ++ +CS
Sbjct: 486 ERKMREEYGKEMRELQHIYEIETADEQSED---DRVLRIESTGAQLDLDSALPHLYHFCS 542

Query: 907 QLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP--CNAPFEKLEGP-VCSSMRLAQQA 963
            L +  +  LRP+F+   +    G      K+ LP   + P    E      S R A + 
Sbjct: 543 VLTTKDFVDLRPDFV---YSSELGSEYVRAKVILPGSVSKPLRVHESRGSWLSERSAAKD 599

Query: 964 VCLAACKKLHEMGAFTDMLLP 984
               A   L+  G   D LLP
Sbjct: 600 AAFEAYSALYRGGLVNDNLLP 620



 Score =  125 bits (314), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 245/599 (40%), Gaps = 110/599 (18%)

Query: 1311 LSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLL 1370
            +S R +   + + E      K +   LP   C    +P  L R    +PSI   +E  L+
Sbjct: 826  VSRRADFLHKVQNEKPSSFTKQFSSVLPASTCVQDVMPAQLSRFGMMIPSITHHIEVQLV 885

Query: 1371 AIQLKDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
              +L   I   +  S    I  A+T AS      Y+R E LGD+ LK   S  L  ++  
Sbjct: 886  VDRLSRTILKDLEISDQSLIQTAITHASYSLDSNYQRLEFLGDSILKLCTSVQLVAEHLD 945

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
             HEG L+ M+ ++VSN    + A   GL  YI   +F  ++W      P++ +D      
Sbjct: 946  WHEGYLSAMKDRIVSNSRSSRAAAEVGLDEYIMTKKFTGAKWR-----PMYVDDL----- 995

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
                    V E K                           R +SSK L+DVVEALIG   
Sbjct: 996  -------VVTEQK--------------------------TREMSSKILSDVVEALIGACM 1022

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRG 1607
            V+GG   A   ++    ++   P E    +        +   +    +E  L   F  + 
Sbjct: 1023 VDGGIPKALKSLQLFFPELNWLPLETRQMTLYQQAANDLHLPIALRPVEQILAYTFTKKS 1082

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            LLVEA+TH S  +SG    +RLEF+GD++LD++I   ++   T L    +  LR+A VN 
Sbjct: 1083 LLVEAMTHPSY-TSGTQSLERLEFLGDSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNA 1141

Query: 1668 ENFARVAVK---------------HKLH-VH----------LRHGS--------SALDR- 1692
            +  A + ++               H++H  H          LRH S         AL R 
Sbjct: 1142 DFLAFLCMEMSIDQNVTNLTEGKNHRIHETHSRRRVSLVSFLRHSSVRLSIYQKEALSRH 1201

Query: 1693 -QIRDFVKEVLEELLK-PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF 1750
             ++RD   ++LE +     F    L    A K   D++ES+ GA+++DSG    V  Q+ 
Sbjct: 1202 AELRD---QILEAIYTGDTFPWALLSRLDARKFFSDMIESLLGAVWIDSG-SMEVCTQLI 1257

Query: 1751 QPL-----LDPMVTPETLPMHP------------VRELQERCQQQAEGLEYKASRSGNLA 1793
            + +     +  ++      MHP            VR +  R +   +  E  A     + 
Sbjct: 1258 ERMGVLRYMRRILKDGVRIMHPKEELGIVADSENVRYVLRREKMGGDATEVNADADEEVR 1317

Query: 1794 T---VEVYIDGVQ-VGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRKN 1848
            T     V++ G + V V    +K+  Q  AA  A+ +LK +   E +  G   GKKRK+
Sbjct: 1318 TEYRCTVFVGGEEIVEVRGGARKEEIQARAAEQAVRILKAR-GHEKRNGGAGEGKKRKS 1375


>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
           42464]
 gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
           42464]
          Length = 1475

 Score =  158 bits (400), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 185/726 (25%), Positives = 321/726 (44%), Gaps = 126/726 (17%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQL++LE++ KKN I  ++TG+GKT +A++ I++   +L+R +K  +A FL P V L
Sbjct: 81  ARAYQLEMLEESLKKNVIVAMDTGSGKTQVAIMRIQA---ELERGDK--IAWFLAPTVSL 135

Query: 364 VYQQAEVIREQTGYVVGHYC-GEMGQDFWDAQR--WQREFDTKQVLVMTAQILLNILRHS 420
             QQ E IR Q   V      G    + W ++   W       +++V T QIL + + H+
Sbjct: 136 AEQQFETIRAQIPGVQSRLILGSDNVEAWSSKPGVWDAVLFNTRIIVSTYQILFDAVTHA 195

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSS 478
           ++ + ++ ++++DE HH+   +P + +M E Y          P + G+TASP+    ++ 
Sbjct: 196 LVPLASLGIIVVDEAHHSKGNNPVARLMREHYVPNKARGLPVPHILGLTASPLMTSNLN- 254

Query: 479 QVDCAIKICNLESKLDSVVCTI-KDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
             D  +    LE  LD+V  T  K R+EL   V  P    + Y  AAS            
Sbjct: 255 --DLEV----LERTLDAVCKTPSKHREELMAQVNHPEMKTISYGGAAS------------ 296

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI----- 592
             +++AAQ +        +  R+   + ++RQ   V     +D  A   + L+ +     
Sbjct: 297 --LDDAAQPTP-----AMLRLRNTCLELDIRQDPFVRHLL-TDNTARGRETLKKVLLTKE 348

Query: 593 NYALGELGQWC--AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
            Y+  ++  +C  A++V ++F         A+Y         Y+ +V+S           
Sbjct: 349 TYSRSQMETFCRRAWEVWKTF-----GPWAADY---------YIYRVIS----------- 383

Query: 651 SKKDAKVVDSENGFVEGGTNEI-EEGELLD----SHVVSGGEHVDVIIGAAVADGKVTPK 705
                        F+ G  N   +EG+ L     +++      +D          +++PK
Sbjct: 384 ------------SFLRGSDNPPSQEGDSLGDQEWAYLAEAFRKLDAQPPPETP-TELSPK 430

Query: 706 VQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN---- 760
           V +L+  L    H  +   IIFV+   +  VL  + A  P  S   +  S++G +     
Sbjct: 431 VHALLDAL--ESHEGNPIGIIFVKERASVAVLSHILAVHPKTSRRYRVGSMVGTSRVPGR 488

Query: 761 -------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                  SQ+     +Q     FR G + LLVATSV EEG+D+  CN+VI FD    + +
Sbjct: 489 RRDILDLSQKDYLLALQ----AFRKGAINLLVATSVLEEGIDVPACNLVICFDKLDNLKS 544

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           +IQ RGRAR   S   L++E  +   +   R  +N E  ++++     D+   K   ++ 
Sbjct: 545 FIQRRGRARMSASHLYLLVEDESDPSS---RQWQNLEGEMKRKY--EDDMRENKRLEQIE 599

Query: 874 SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
             D +   + +   TGA +++  A   +  +C+ L + +Y    P +++  H+  G P +
Sbjct: 600 DSDDLDYPILRDRETGAQITILDAKAHLEHFCATLSTRKYVDWSPFYVV--HDLEGNPVD 657

Query: 934 Y------SCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
                     + LP + AP    FE L      S   A +     A  KL+E+G     +
Sbjct: 658 ARQPGLRKATVHLPVSLAPELRTFESLHA--WRSEAKACRDAAFQAYAKLYEVGLVNRNM 715

Query: 983 LPDKGS 988
           LP + S
Sbjct: 716 LPIRES 721



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 223/574 (38%), Gaps = 120/574 (20%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI--- 1387
            K Y   LP +      +P      A  +P+I R +E  L+A  L D    P   + +   
Sbjct: 943  KPYPRVLPADQVRADSIPAVYAHIAMFIPAITRALEVHLVAKDLLDTRLEPTGITDLSLV 1002

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            + A++A++ +    YER E LGDA LK+  +      YP   EG L+R++ ++VSN  L+
Sbjct: 1003 VAAISASAARGPTDYERVEFLGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLF 1062

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
              A+  GL  YI    F   +W      P + ED  +   S                   
Sbjct: 1063 HAAVDFGLDRYIIHKTFTMHKWR-----PAYVEDLLENPPS------------------- 1098

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                             +  R LS+KTLADVVEALIG  Y+ GG   A   M     + E
Sbjct: 1099 ----------------ETETRRLSTKTLADVVEALIGASYISGGTPKALACMSLFLPEFE 1142

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV-SCY 1626
                E          P+         +LE  L   F  R LLVEA+TH S     + +  
Sbjct: 1143 WHSIEHCREVLYNQAPDDEPLPATMRSLESLLGYTFTKRSLLVEAMTHPSCNGPNIRASL 1202

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLP--PGRLTDLRAAAVNNENFARVAV--------- 1675
             RLEF+GDA+LD+++ K LF   T  P     L  LR   VN +  A +A+         
Sbjct: 1203 DRLEFLGDAILDYIVVKALFDMSTPTPLENSTLHLLRTTLVNADILAFLALEWAITQDGF 1262

Query: 1676 --------------------------------------KHKLHVHLRHGSSALDRQIRDF 1697
                                                  +  L   LRH S  L    R  
Sbjct: 1263 DVVTTTTSTTTTTTLPSSSSGREDAGANTSVIVTARQTRLPLPSFLRHASPDLGLAQRAT 1322

Query: 1698 V-------KEVLEELLK-PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG--RDTSVVW 1747
                    + +L+ L + P +    L   +A K   D+VES+ GA+++DSG  R    V 
Sbjct: 1323 ALRHAAMREPILQALWRGPRYPWSLLSRLQAQKFHADVVESLLGAVWVDSGDMRQCEAVA 1382

Query: 1748 QV--FQPLLDPMVTPETLPMHPVREL---------QERCQQQAEGLEYKASRSGNLATVE 1796
            +     PL+  +V      +HP  EL         +   QQ  EG E     +  L   E
Sbjct: 1383 ERIGILPLMRRLVADRVWLLHPKEELGVLAGSRPVRYLVQQVPEGEE-----AERLFRCE 1437

Query: 1797 VYIDGVQVGVAQNP-QKKMAQKLAARNALAVLKE 1829
            V +DG  VG A+    ++ A+  AA  A A LKE
Sbjct: 1438 VAVDGEVVGRAEGAFSQEEARTRAAEEACARLKE 1471


>gi|168177333|pdb|3C4T|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
            Dicer
          Length = 265

 Score =  158 bits (399), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 142/250 (56%), Gaps = 15/250 (6%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            F   E  +  +FK++  L++A THAS   + ++  YQRLEF+GDA+LD+LITKHL+    
Sbjct: 15   FETFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPR 74

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------- 1703
               PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFVK  LE       
Sbjct: 75   QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEMQGM 134

Query: 1704 --ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT-- 1759
              EL +   +     D + PK +GDI ES+AGAI++DSG    VVWQV+ P++ P++   
Sbjct: 135  DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKF 194

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKL 1818
               +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  
Sbjct: 195  SANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSA 252

Query: 1819 AARNALAVLK 1828
            AAR AL  LK
Sbjct: 253  AARRALRSLK 262



 Score = 45.1 bits (105), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 32/183 (17%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T  Y+R E LGDA L +++++ L+    Q  
Sbjct: 18   FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
             G LT +R  +V+N +    A+      Y +A         +P +  V D+  K      
Sbjct: 78   PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA--------VSPELFHVIDDFVK------ 123

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDME-DGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
            F  EK             NE +  D E     E +     +   K + D+ E+L G  Y+
Sbjct: 124  FQLEK-------------NEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYM 170

Query: 1549 EGG 1551
            + G
Sbjct: 171  DSG 173


>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
          Length = 1392

 Score =  158 bits (399), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 183/682 (26%), Positives = 305/682 (44%), Gaps = 125/682 (18%)

Query: 297 EKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVF 356
           E  P   +R YQL++L+ + K+N I  ++TG+GKT IA+L IR+    L+  + + L  F
Sbjct: 25  EDAPFRASRAYQLEMLQMSLKENVIVAMDTGSGKTQIAILRIRA---QLESSSDQKLIWF 81

Query: 357 LVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
           L P V L  QQ   IR +   + +    G      W A  W+      Q +V T Q+LL+
Sbjct: 82  LAPTVLLCAQQVAAIRMEIPSISIRLIVGNDNVHTWGASTWKSLLSGTQAVVSTYQVLLD 141

Query: 416 ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH--TTSKE-----KRPSVFGMTA 468
            L H+ +K++A         H+ V  HP   +M+ FYH  TT +E      RP++ G+TA
Sbjct: 142 ALDHAFVKLDA---------HNCVGSHPGGKIMNHFYHYQTTPQEAANSSARPAILGLTA 192

Query: 469 SP---VNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDRKELEKHVPMPSEVVVEYDKAA 524
           +P    ++ GV            LE  LD+  V     R+EL +HV  P   ++E +  +
Sbjct: 193 TPSMQAHITGVE----------KLEKVLDAKCVSPSLHREELLRHVKRPQLRIIECESTS 242

Query: 525 ------SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE 578
                 S+ SL ++  +M++  +    S   ++  + M          L++V    +   
Sbjct: 243 TEHYTESMTSLRQECVKMDILEDPYVISLRTQNTDRSM--------RRLQRVMAEQKTWS 294

Query: 579 SDGAANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVKFQESYLSKV 637
               ++L+ + R I   LG    W A + + +S  T LQN E                  
Sbjct: 295 RLQVSSLLNRSRTIRNVLGP---WAADFYIWRSKHTFLQNLE------------------ 333

Query: 638 VSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHV---VSGGEHVDVIIG 694
                              VV S +G+       I E +L  + V   ++  E     IG
Sbjct: 334 ------------------SVVPSLDGW-------IPEEKLYIARVLQDIAALEPTPRPIG 368

Query: 695 AAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSA 753
                  V+ KV  L++ LL +Q   D   IIFV     A VL  +   +P +    +  
Sbjct: 369 ----QDSVSDKVHLLLRELLTFQ--GDVIGIIFVTERATAAVLAALLRSIPGIRDRYQIG 422

Query: 754 SLIGHNNSQEMRTFQMQE--------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
            ++G +N+Q +R   + E        T+ +FR+G + LLVAT+V EEG+D+  CN+VI F
Sbjct: 423 CMVGTSNNQ-LRKRSLYEFFGSNDLQTLHEFREGTINLLVATAVLEEGIDVPACNLVICF 481

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTDL 863
           D  ++  ++IQ RGRAR   S  +L   +     ++ +      EE ++K  +  ER + 
Sbjct: 482 DSPQSPKSFIQRRGRARMQDSTLLLFTHK----ESSIIDEWAVFEEEIQKLCQDSER-EH 536

Query: 864 SHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME 923
            HL+   RL   D      ++V  TGA +  ++A   +  +C  + S +Y+  RP+++ +
Sbjct: 537 QHLQTLERL---DEGIDFCFRVPYTGARLDHDNAKQHLEHFCRVISSRQYTDGRPDYVTK 593

Query: 924 RHEKPGGPTEYSCKLQLPCNAP 945
             E   G    + ++ LP + P
Sbjct: 594 LTEGDHG-LAITAQVFLPASLP 614



 Score =  113 bits (283), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 196/473 (41%), Gaps = 99/473 (20%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H  + + E + +  K Y   LP     +  +     R    +PSI+  +E+ML+  QL
Sbjct: 862  FLHPIKVDPETQILSQKQYASVLPVSYATMDSIHIKHARFGMLVPSIVHIIETMLIVRQL 921

Query: 1375 KDKINYPVPASKIL---EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
               +  P+  S      +A++A S  E   YER E LGD+ LK+  S    +      EG
Sbjct: 922  SVTLLDPLGISDYFLLRDAISARSAMEPTHYERLEFLGDSILKYCASMQAAVTNLDWSEG 981

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
             L++ ++++++N  L + A+  GL  +I +  F   +W                    F 
Sbjct: 982  YLSKYKERLIANSRLSRAAVETGLSRFILSMPFTGQKWRP------------------FH 1023

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
             E  +A                    G+++   S  R LS+K LADVVEALIGV Y  GG
Sbjct: 1024 LETVLA--------------------GKMK--PSPKRNLSTKVLADVVEALIGVAYTVGG 1061

Query: 1552 KDAANHLMKWIGIQVE-SDPEEVGCPSR-PACVPESVLRSVDFHALEDALKIKFKDRGLL 1609
                   +     + +  DP +  C     +C P   + S   H LE+ +   F  + LL
Sbjct: 1062 IPKTIQCLSIFITECDWMDPSD--CREEFFSCAPSHGVNSSYLHVLEELVGYSFTKKSLL 1119

Query: 1610 VEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
            +EA THAS         ++RLEF+GD++LD++I   L      L   ++  ++ A VN +
Sbjct: 1120 LEATTHASYIGDIFGRSWERLEFIGDSILDYIIVNKLINHTPPLAHSQMHIIKTAMVNMD 1179

Query: 1669 NFARVAV-KHKL------------------HVHL----RHGSS----------------- 1688
              A +++ +H+L                  H  L    RH SS                 
Sbjct: 1180 FLAFISLEEHELSQTESFVTESGTVLTENKHTALWKFIRHSSSGIGPAQLETAKRHVQFR 1239

Query: 1689 -ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
             A+ R IRD        L+K            A K   D+VE++ GA+++DSG
Sbjct: 1240 GAILRAIRDGDHYPWHILIK----------LHASKFYSDLVEAVVGALWVDSG 1282


>gi|238499729|ref|XP_002381099.1| dicer-1, putative [Aspergillus flavus NRRL3357]
 gi|220692852|gb|EED49198.1| dicer-1, putative [Aspergillus flavus NRRL3357]
          Length = 605

 Score =  158 bits (399), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 160/585 (27%), Positives = 250/585 (42%), Gaps = 88/585 (15%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QP++    V   +NLL        ++  + E+ ++   +V + P    I  +P  +   
Sbjct: 48   QQPVLEVELVRLRRNLL--------DKMTDTEKDVETRCFVCIEP--LRISAIPEEIAAS 97

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS-------CQETFC------ 1401
                P+I+ R+++ L+A++  + ++  V  +  LEA T  S        Q+         
Sbjct: 98   CLAFPAIINRLDAYLIALEGCNTLDLSVKPAYALEAFTKDSDNTEEHRVQQIHVQRGMGK 157

Query: 1402 -YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF++ P   E      R  ++ N  L+  AL K L  YI+
Sbjct: 158  NYERLEFLGDCFLKMATSISLFVQNPDDDEFDFHVNRMCLICNKNLFNTALKKELYQYIR 217

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F+   W   G+  +   D +         +K  AE K                    
Sbjct: 218  SRGFSRHTWYPDGLTLLHGRDHR---------KKVSAESK-------------------- 248

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEEVGC---P 1576
                     L  KT+ADV EALIG   + GG  +  +  +K +   V+S   +  C    
Sbjct: 249  -------HALREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSPNHKALCWADY 301

Query: 1577 SRPACVPESVLRSVDFHAL------EDALKIKFKDRGLLVEAITHASRPSS--GVSCYQR 1628
            +    +P+   +S D + L      E+ L  +FK   LL  A TH S PS+   V CYQR
Sbjct: 302  TSSYMLPKYQTQSPDGYELDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQR 361

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GD++LD +    LF+ Y +  P  LT+ + A  +N+    +AVK  LH HLRH S+
Sbjct: 362  LEFLGDSLLDMVCVDDLFYRYPDKDPQWLTEHKMAMASNKFLGALAVKLGLHTHLRHFSN 421

Query: 1689 ALDRQIRDFVKEV-LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
             L  QI  + +E+   E    G   + L     PK L D+VE+  GA F+DS     VV 
Sbjct: 422  PLQSQITHYAEEIQAAENESQGAVDYWLVTKDPPKCLPDMVEAYLGAAFVDSDFQFRVVE 481

Query: 1748 QVFQ----PLLDPMVTPETLP-MHPVRELQERCQQQAEGLEYKASRSGNLATVE------ 1796
              FQ         M   +T    HP   LQ R   +     Y   ++G +  V+      
Sbjct: 482  DFFQRHVKSYFHDMTIYDTFANKHPTTFLQNRLTNEYGCTNY-CLKAGEIPVVDGGTVSV 540

Query: 1797 ---VYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEK 1838
               V +  V +        + A+  A+  AL+VL+    +E +EK
Sbjct: 541  LAAVIVHEVVIAEGTASSGRYAKVKASEKALSVLENMGPSEFREK 585


>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora
           B]
          Length = 1702

 Score =  158 bits (399), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/224 (40%), Positives = 128/224 (57%), Gaps = 9/224 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  +A++ N IA L+TG+GKT I+ LLIR I      Q K  + VFLVPKV LV
Sbjct: 16  RRYQEEIFSRAQEGNVIAALDTGSGKTYISTLLIRWISVRDAGQGK--IIVFLVPKVALV 73

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ + I + T   V  +CG    D  D   W +E +   VLVMTAQ+ LNIL H    +
Sbjct: 74  DQQGDFIAKHTPLRVSKFCGATAIDMADRPGWLKELENVDVLVMTAQLFLNILTHGHWGL 133

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           + ++L+++DECHH  K H Y+ +M E++   ++ KRP +FGMTASP     V +  D   
Sbjct: 134 DKVSLMVIDECHHTRKNHAYNGIMREYFQLPTR-KRPKIFGMTASP-----VWNPRDAQE 187

Query: 485 KICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
            +  LE  LD+ V  ++    EL+ H P P E V EY  +  ++
Sbjct: 188 SLLTLERNLDAKVMAVRQHVDELKAHAPKPKEWVHEYPPSPEVY 231



 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 160/302 (52%), Gaps = 26/302 (8%)

Query: 703 TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNS 761
           +PKV+ LI IL   Q+T  F+ IIFVE+   A  L K+   +P LS  ++SA LIGH   
Sbjct: 361 SPKVRILIDILFD-QYTSTFQGIIFVEQRHVAACLAKMLPRVPQLSHLIRSAQLIGHGTG 419

Query: 762 QEMRTFQ--------MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
             M   +         Q+ +  FR+ ++ LLVATSVAEEGLD   C++VIRFD  + ++ 
Sbjct: 420 NSMYKIRGKGMAVRNQQDVVKLFREKQINLLVATSVAEEGLDFPACDLVIRFDPLQHMVG 479

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           Y+QSRGRAR   S +I+M+E+G+ +H    R    SE  +R+    R +  ++ D S  +
Sbjct: 480 YLQSRGRARHQTSTFIIMVEQGHEAHIARYRAFSESEPQIRQAYQTREEPRNVSDLSEEV 539

Query: 874 SVDAV--PGTV-----YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
               +  P  V     + V STGAV++  SA GL+H  C+ +P DR++       + ++E
Sbjct: 540 EEGEIIDPQDVAERERFVVPSTGAVLTYTSASGLLHQLCALVPRDRFT----PVALPKYE 595

Query: 927 KPGGPTEYSCKLQLPCNAPFEKL--EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              G    + +L L    P E L   GP   S + A++A    A K LH +    D LLP
Sbjct: 596 ---GDFISTIRLPLSLPLPPEHLVYTGPEKRSKKEAKRAAAFLAVKNLHVLNVIDDYLLP 652

Query: 985 DK 986
            K
Sbjct: 653 VK 654



 Score =  136 bits (342), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 255/620 (41%), Gaps = 87/620 (14%)

Query: 1237 GRIVTAAHS--GKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVEL--- 1291
            GR++    S  G+   + +IR ++T  S+ P      G   +++Y DY+ Q++  +    
Sbjct: 809  GRVLVMCSSEHGRPLILRNIRRDLTPMSAPPEGAREAG---HATYRDYWTQRWTRKRHVP 865

Query: 1292 -------IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI 1344
                     + +P +R    +Y         +HS+        I      +  P  +C +
Sbjct: 866  DVPEDGPCIEAEPFVRHISCAYS-------LDHSDI----SPPISTAAQVILYPQRMCRV 914

Query: 1345 HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASCQETFCYE 1403
              L   + R    LP +  R+  +  A   + ++  P  A  ++ +ALT  +    F  +
Sbjct: 915  AHLSEDIFRTFHVLPELCHRLTDVWRARTARAELGLPPIADDLMVQALTLPAAAAGFNNQ 974

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
              E LGDA LK   +  LF KYP +HEGQL  +R+  V N  L    L  GL+ Y+ ++ 
Sbjct: 975  LLETLGDAVLKLGAAVHLFNKYPHRHEGQLDMLRRTCVCNRTLLARGLEHGLEQYLTSET 1034

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
                 W                                     Y   E  D  D      
Sbjct: 1035 QHIRAW------------------------------------RYIAPEGHDPSDPRPYRH 1058

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD-PEEVGCPSRPACV 1582
            ++  R    +++ D +EA +G  +  GG   A      +G+      P       R    
Sbjct: 1059 AA--RSFPRRSIQDCMEATLGAAFATGGIQMALRAGTALGLSFGGPLPWTARYGGRLPAK 1116

Query: 1583 PESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLIT 1642
              S L    F  L++ L  +FK   LL+EA+TH S  S   + YQRLEF+GDA++D ++ 
Sbjct: 1117 DASPL----FTELQEVLGHQFKHGQLLLEAVTHPSFGSYETTSYQRLEFLGDALIDLVVM 1172

Query: 1643 KHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK-HKLHVHLRHGSSALDRQIRDFVKEV 1701
            ++L+F Y     G+L+  R+ AV     A VAV   +LH  +   +  L   I  +V  +
Sbjct: 1173 RYLYFKYPRATSGQLSWARSRAVCASALAWVAVNCLELHKMMLVNNVGLSVAIGKYVP-I 1231

Query: 1702 LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD---TSVVWQVFQPLLDPMV 1758
            L+E+      + G      PK + D++ES+ GA+ +D G D    + V ++    L  ++
Sbjct: 1232 LKEISNIDIINNGWKQ-DPPKAISDVLESVLGAVLVDCGYDFEKAAAVVELTMADLLAVL 1290

Query: 1759 TPETLPMHPVRELQ------ERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQK 1812
            TP+ LP  P+ EL       + C+      E K   + ++   ++ +    VG    P  
Sbjct: 1291 TPD-LPRDPISELMVWAAQSKCCKITFRRPELKRHDAYSIIAHDIDV----VGPVTAPNL 1345

Query: 1813 KMAQKLAARNALAVLKEKET 1832
              A+ LAA    AVL   ++
Sbjct: 1346 PRAKGLAAERGRAVLSNPDS 1365


>gi|195996297|ref|XP_002108017.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
 gi|190588793|gb|EDV28815.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
          Length = 707

 Score =  157 bits (398), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 261/619 (42%), Gaps = 107/619 (17%)

Query: 1249 FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIR-GRGVSYC 1307
            F+V ++  +M+  S F        P   S+Y++YYK KY +++    QPL+   R     
Sbjct: 119  FFVSNVCSDMSPSSKFT------NPDVASTYSEYYKIKYDIDIQDANQPLLEVARFKKMH 172

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
              LL+ +   S   +     +   +  + L PELC IH +P  L   +Q L  ++ RVES
Sbjct: 173  ITLLNAKQSGSITHDIRTLSVNSNSNSIVLIPELCLIHVIPAELWFLSQYLALVLYRVES 232

Query: 1368 MLLAIQLKD------------KINYPVPASK-----ILEALTAASCQETFCYERAELLGD 1410
            +LLA +L++             ++Y + A       +LEA+T +S Q+ F  ER E LGD
Sbjct: 233  ILLAFELRELLRSQANICDIYSVDYLITAVGSAKPCLLEAITLSSAQDHFNLERLEFLGD 292

Query: 1411 AYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-W 1469
             YL + ++    L++P     ++    + +  N  L++    + +  YI    F  ++ W
Sbjct: 293  RYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFRLGAGRRIPYYIVGCPFNQNKSW 352

Query: 1470 AAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV 1529
              PG                F   ++V+E  +   + Y                  +++ 
Sbjct: 353  VPPG----------------FVINQTVSELSIAMSREY------------------THQP 378

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRS 1589
            L+ K +AD VE LIG   +  G+++    M+W+G ++    + +          + ++ S
Sbjct: 379  LTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEISECLDGI----------QELIPS 428

Query: 1590 VDF---------HALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHL 1640
            +DF         +++E  L   F++R LL+ A+TH S        Y++L F+GD +L + 
Sbjct: 429  IDFRTNLYSETANSVETILNYSFRNRSLLMLALTHKSYSGLESISYEKLAFLGDTLLIYQ 488

Query: 1641 ITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKE 1700
            I   L+  YT+  P     L      N  +  VA+   L   L H S  L  QI D + +
Sbjct: 489  ICLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQI-DEIYQ 547

Query: 1701 VLEELLKPGFNSFGLGDCK-----------------APKVLGDIVESIAGAIFLDSGRDT 1743
             LE      F+S     C                   PK LGD   ++  A+FLD+  D 
Sbjct: 548  ALEADDVQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVPKELGDTFAAVVAAVFLDNYPDE 607

Query: 1744 SVVWQVFQPLLDPM-----VTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVY 1798
                ++   LL+P+        + LP+   +++ E    +     +  ++SG+ +     
Sbjct: 608  DTAGRIINSLLNPIFDVKYTCEDNLPVSLTQQMYESLPNRVRTF-FVDNKSGSYS----- 661

Query: 1799 IDGVQVGVAQNPQKKMAQK 1817
            I  V V +  + +K  A K
Sbjct: 662  ICNVSVVLKNSTEKTFAGK 680


>gi|167046020|gb|ABZ10541.1| dicer-like protein B [Trichoplax adhaerens]
          Length = 357

 Score =  157 bits (398), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 183/376 (48%), Gaps = 41/376 (10%)

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            L+ALT A   + F  E  E LGD+YLK+ VS   FL Y + HEGQL+ ++ ++VSN  LY
Sbjct: 1    LKALTLARANDDFNLETLEFLGDSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60

Query: 1448 QYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            Q  +  GL  YI       +  W  PG       D+   +  L     S+      T K 
Sbjct: 61   QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPTQK- 119

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLM-KWIGIQ 1565
                                   L +K +ADV+EAL+G   +E G+++AN+ +   +GI+
Sbjct: 120  -----------------------LKNKCIADVMEALLGGILLELGENSANNFITNNLGIK 156

Query: 1566 VESDPEEVGCPSRPACVPES-VLRSVDFHALEDALKIKFKDRGLLVEAITHAS----RPS 1620
            V      +      A    S +  + +   LE  L   FKDR LL+ A+THA+    R +
Sbjct: 157  VGRLSHNIAKLDDDARKEISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIA 216

Query: 1621 SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             GV CYQRLEF+GDA+L +++ +H + +  N  P  L D   A++ NE+ A + + + +H
Sbjct: 217  EGVECYQRLEFLGDAILQYIVVRHCYHANNNYKPADLHDFVEASLQNESLAVMTMVYGIH 276

Query: 1681 VHLRHGSSALDRQIRDFVK-----EVLEELL----KPGFNSFGLGD-CKAPKVLGDIVES 1730
             +  + S +L  QI   ++     E  E+ L    K    S  L D    PK LGD+ ES
Sbjct: 277  KYFFYNSPSLFSQINQLLQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFES 336

Query: 1731 IAGAIFLDSGRDTSVV 1746
            + GAIF+D GR   VV
Sbjct: 337  LIGAIFIDCGRSIEVV 352


>gi|119190771|ref|XP_001245992.1| hypothetical protein CIMG_05433 [Coccidioides immitis RS]
          Length = 1435

 Score =  157 bits (398), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 176/731 (24%), Positives = 320/731 (43%), Gaps = 140/731 (19%)

Query: 290 GKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-- 347
           G     +  +P  +AR YQL++L ++ ++N I  ++TG+GKT IA+L I+    +L+R  
Sbjct: 76  GTSKSQEALLPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQ---RELERCP 132

Query: 348 QNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
            +KK+                                           W       ++++
Sbjct: 133 AHKKI-------------------------------------------WDDILLNIRIVI 149

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----RPSV 463
            T Q+LL+ L +  + +  I+LL+ DE HH V+  P + +M +FYH   +E+     P +
Sbjct: 150 STPQVLLDALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLPHI 209

Query: 464 FGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDK 522
            G+TASP      + Q D  +    LE  L++V  T K  R+E+ + V MP    +EY  
Sbjct: 210 LGLTASPTTR---ARQTDLEV----LEINLNAVCVTPKMHREEMMQFVHMPEYRSIEYQP 262

Query: 523 AASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGAR-DAGAKEELRQVYGVSERTESDG 581
               +S    ++++ V + E    +    K  FM  R D  +++ L       +    D 
Sbjct: 263 DVQNFS--SIVEKLSVIINELDIENDPFVK--FMRRRNDLKSRQRLLDALENKKTPCLDQ 318

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
               +++ R I+    ELG W +                          E +L++ +  L
Sbjct: 319 LKRCLRRSRVIHR---ELGPWAS--------------------------ERFLTRCIMGL 349

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
           + +    A   + A     +N ++            + S VVS  E     +G      +
Sbjct: 350 KSKQT-NASGPQWADWDREDNSYMLN----------VLSQVVSSTE-----MGVQNPPDE 393

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ KV  LI  L+  +H      I+F E     ++L ++ +  P    +K+ + +G + S
Sbjct: 394 LSRKVHKLIDFLV-LEHVNGSIGIVFAEERTIVIMLAQLLSLHPRTKHIKTTAFLGSSAS 452

Query: 762 QEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
              ++              I   R G+  L++AT+V EEG+D+  C++VI FDL K + +
Sbjct: 453 VSRKSDITELHNPIDQSTAIDDLRTGKKDLIIATAVLEEGIDVPICDLVICFDLPKDLRS 512

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRL 872
           +IQ RGRARK GS + L +   + + ++ L      E+T+++  +E +  L H++    L
Sbjct: 513 FIQRRGRARKKGSKFALFLHSEDRATSSELHLM---EKTMKQLYLENKRALEHIQ---YL 566

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            +V+      ++V STGA+++L++A   +  +C  L S  +    PEF++E  +  G   
Sbjct: 567 ENVEEEGYDGFRVASTGALLTLSNARNHLSHFCGTL-SAEFIATDPEFVLEGDDTTG--- 622

Query: 933 EYSCKLQLP--CNAPFEKLEGPVC-SSMRLAQQAVCLAACKKLHEMGAFTDMLLP----- 984
            +S K+ LP   +    +  G +   + ++A++     A   L+E G   D L+P     
Sbjct: 623 -FSAKVILPSFLDPKLREFRGILLWKTEKMAKRDASFQAYVALYEAGLVNDYLMPAHHHI 681

Query: 985 -DKGSGEQQEK 994
            D+   EQ EK
Sbjct: 682 DDEDGLEQVEK 692



 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 192/456 (42%), Gaps = 98/456 (21%)

Query: 1332 TYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---IL 1388
            T   F P   C +  LP    + A  +P ++  +E+  +A +L   I +PV  S    +L
Sbjct: 917  TAKCFYPANNCSVDRLPVEYSQFALFIPCLIHSIENYFIANELAQTILHPVGFSNLSLVL 976

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
             A+++++ +E   Y+R E LGD+ LK   S  L   +P   EG+LT  +  +VSN  L  
Sbjct: 977  TAISSSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMRKGNIVSNGYLAN 1036

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             AL  GL  +I    F  ++W                                       
Sbjct: 1037 AALQTGLDKFILTKPFTGAKWRP------------------------------------- 1059

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
             Y  D +  G++   +   R +S+K LADVVEALIG   ++GG++   + +K     ++ 
Sbjct: 1060 SYNTDHINTGDM---TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIPDIKW 1116

Query: 1569 DPEEVGCPSRPACVPESVLRSVD----------FHALEDALKIKFKDRGLLVEAITHASR 1618
             P          CV  ++L   +             +E  +   FK + LL+ A+TH S 
Sbjct: 1117 SPLN-------ECV--NILHHQEDSFSDENNNMLSEIEGLVGYTFKKKPLLLAAVTHPSS 1167

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA------- 1671
              SG S YQRLEFVGD++LD ++ + LF S        +  +R A VN +  A       
Sbjct: 1168 KGSGHS-YQRLEFVGDSILDIIVVQELFESPRCFHHFDMHLMRTALVNADFLAFLCMNAY 1226

Query: 1672 --------------RVAV-----KHKLHVHLRHGSS-----ALDRQIRDFVK--EVLEEL 1705
                          RV V     +  L   ++H +S     A  R  + + K  E ++E 
Sbjct: 1227 REEDRGEAVENSKRRVTVAMTKRRAYLWGFMKHSASWDIVNAQQRAAKQYEKLHEEIDEK 1286

Query: 1706 LKPGFNSFGLGDCK--APKVLGDIVESIAGAIFLDS 1739
            L+          C+  A K   DIVESI GAIF+DS
Sbjct: 1287 LRSSKTYPWTLLCRLDAAKFFSDIVESILGAIFIDS 1322



 Score = 52.0 bits (123), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 24/161 (14%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            + F +  L++ AI+  S  +   S YQRLEF+GD++L    +  L   +   P GRLT  
Sbjct: 967  VGFSNLSLVLTAIS--SSAAREASNYQRLEFLGDSLLKLHTSIQLAADHPLWPEGRLTMR 1024

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--FGLGDC 1718
            +   V+N   A  A++           + LD+ I    K       +P +N+     GD 
Sbjct: 1025 KGNIVSNGYLANAALQ-----------TGLDKFI--LTKPFTGAKWRPSYNTDHINTGDM 1071

Query: 1719 KAP------KVLGDIVESIAGAIFLDSGRDTSV-VWQVFQP 1752
              P      KVL D+VE++ GA  +D G +  +   ++F P
Sbjct: 1072 TEPTREMSTKVLADVVEALIGAANIDGGENKILNCLKIFIP 1112


>gi|452003006|gb|EMD95463.1| hypothetical protein COCHEDRAFT_1026333 [Cochliobolus
           heterostrophus C5]
          Length = 1592

 Score =  157 bits (397), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 133/239 (55%), Gaps = 12/239 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM-----LAVFLVP 359
           R YQ ++ ++AK +N IA L+TG+GKT IA LL+R +  D++  ++       +A FLV 
Sbjct: 118 RDYQTELFQRAKSENVIAVLDTGSGKTHIATLLLRHVL-DMELDHRARGGIPRMAFFLVD 176

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
            V LV+QQA V+R      V   CG MG   W    WQ  FD   ++V TA++L+  + H
Sbjct: 177 SVNLVFQQANVLRCGLDQNVEGICGSMGASLWSKSTWQSYFDKNMIIVCTAEVLVQCMMH 236

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSS 478
           S + M  INLLI DE HHA   HPY+ +M ++Y       +RP +FGMTASPV+ KG+S+
Sbjct: 237 SFMTMSQINLLIFDEAHHAKSNHPYARLMKDYYLQEIDVSQRPRIFGMTASPVDTKGLSA 296

Query: 479 -QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWS--LHEQLK 534
             +  A +  NLE  L S + T  +       +  P E V  Y +    +   LH++++
Sbjct: 297 DHIKEAAR--NLEKLLHSKIATTAESTLASNSISRPDEEVAMYPRLQEEYETPLHQKIR 353



 Score =  149 bits (376), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 170/308 (55%), Gaps = 23/308 (7%)

Query: 694 GAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAEL--PSLSFV 750
              ++D  ++ KVQ L   L L Y+ +++ R I+FVE+   A +L  +F+++  P L   
Sbjct: 437 ACTLSDQDLSSKVQKLYYWLNLYYERSDEARCIVFVEQRQTARLLQLIFSQIGGPHL--- 493

Query: 751 KSASLIGHNNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           + + L+G N S+  +   ++    T+AKFR G +  L ATSVAEEGLDI QCN+V+RFDL
Sbjct: 494 RCSVLVGINTSEHEQNISLRNQILTVAKFRRGELNCLFATSVAEEGLDIPQCNLVVRFDL 553

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHL- 866
            +T++AY+QSRGRAR   S Y+ MIE GN  H   + + +  E+ +R+   E     H+ 
Sbjct: 554 YRTMIAYVQSRGRARHRNSKYLHMIEEGNHDHRERVMDVKLDEQVMRRFCRELPQDRHID 613

Query: 867 ---KDTSRLISVD--AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPS-DRYSILRPEF 920
               D+  L++ +    P  + ++   GA +S  S++ +++ + + LP  DR ++L+P +
Sbjct: 614 EYDNDSMDLLTFEDQLYPSFITKL---GAKLSFRSSLAILNHFVATLPGPDRQTMLQPTY 670

Query: 921 IMERHEKPGGPTE----YSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
           ++       G       +  ++ LP ++P   + G V S   +A+ +    AC +L++ G
Sbjct: 671 VVCPDLNYDGLDAQRRGFVSEVILPEHSPINTIIGDVQSKKAIAKCSAAYKACLELYKKG 730

Query: 977 AFTDMLLP 984
              D LLP
Sbjct: 731 YLDDNLLP 738



 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 234/603 (38%), Gaps = 121/603 (20%)

Query: 1234 DLEGR-IVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADY----YKQKYG 1288
            DL  R  V   + G+R+Y E     +  +   P+     G    SS  DY    + +   
Sbjct: 917  DLMNRYFVDPGNGGRRYYSERFAPHLKPQDPVPKGLSRQGHKFMSSILDYSDSTWTRNRN 976

Query: 1289 VELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLP 1348
            +    + QP+++   +   +N L+    H E++E      L     +++ PE   I  L 
Sbjct: 977  ILKWNQSQPVLQAERIPLRRNQLA----HIEDKEKGDFSNLK----IYICPEPFHISNLA 1028

Query: 1349 GSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAAS------------- 1395
               V     LP+I+ R ES L+A++    +   V  +  LEALT  S             
Sbjct: 1029 TPFVVMCYVLPAIIHRFESYLIALEACSVLELKVNPALALEALTKDSENSEEHDEEKINF 1088

Query: 1396 ------CQETFCYE------------RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
                    E + YE              E LGD +LK   S  +F++ P ++E +    R
Sbjct: 1089 KSGMGPNYERYGYELRMNGFKLTLGLSLEFLGDCFLKMATSLSVFVQQPDENEFEFHVRR 1148

Query: 1438 QQMVSNLVLYQYAL-----------SKGLQ--SYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
             +M+ N  L + A+            K LQ   YI+ + F+   W   G+          
Sbjct: 1149 MEMLCNKNLMETAVGNKKVVSPEGTEKDLQLYKYIRTESFSRRTWYPEGL---------- 1198

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                           +L   K  N+ +DD ++     GD         K++ADV EA IG
Sbjct: 1199 ---------------RLLKGKGANKSQDDWLKLTHNLGD---------KSIADVCEAFIG 1234

Query: 1545 --------------------VYYVEGGKDAANHLM-KWIGIQVESDPEEVGCPSRPACVP 1583
                                V  V+   ++ +H M KW      SD  E     +     
Sbjct: 1235 ATLQEHYTGDRWRPNDWDEAVKAVKLFANSPDHTMSKW------SDYYEAYQKPKYQTAE 1288

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLI 1641
             S         +E      FK   LL  A  H S P     +  YQRLEF GDA+LD   
Sbjct: 1289 ASAAMLDMARKIEMKHPYHFKYPRLLRSAFAHPSYPYMYENIPNYQRLEFAGDALLDMAF 1348

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
              HL+F Y +  P  LT+ +   V+N+    V VK   HV+++  ++ L  QIRD+V E 
Sbjct: 1349 ITHLYFKYPDKDPHWLTEHKTPMVSNKFLGAVCVKLGWHVYIKQNTATLTNQIRDYVLEA 1408

Query: 1702 LEELLKPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
             E   + G    + +   + PK L D++E+   +IF+D+  D  VV   F+  L P    
Sbjct: 1409 EEAEREAGGAVDYWVTISEPPKCLADVIEAYVASIFVDAEFDFGVVQTFFEMHLKPFFLD 1468

Query: 1761 ETL 1763
             TL
Sbjct: 1469 MTL 1471


>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
            3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
            [Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
            nidulans FGSC A4]
          Length = 1269

 Score =  157 bits (396), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 218/520 (41%), Gaps = 109/520 (20%)

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYC-------KNLLSPRFEHSEEQEGEGEEILDKTYYVF 1336
            + +YG  LIFK+     G     C       +NLL  R   ++++  E E +   T    
Sbjct: 621  RSRYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQ-RQTLAKKRPAEDEILGSPTKKRI 679

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPAS---KILEALTA 1393
            L    C I  LP S     + +P I+ R+E+ L+A +L + +   +       ++ A+T 
Sbjct: 680  LSASHCTIDRLPASETVFGRFIPVILDRLEAALVATRLCETVLRDIQFQDLRHVITAITM 739

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
               Q    Y+R E  GD+ LK+ V+  LF   P  HEG LT     +V N  L + AL +
Sbjct: 740  PLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQ 799

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL +YI ++RF P +W+AP                            L ++K Y      
Sbjct: 800  GLDAYIISNRFTPRKWSAP----------------------------LISEKLYA----- 826

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                      S+S R +S+K LADVVEALIG  Y++GG   A   +  +    E +  E 
Sbjct: 827  ----------SASTRSMSAKVLADVVEALIGAAYIDGGLHKAQSCI--VRFLPEIELPET 874

Query: 1574 GCPSRPACVPESVLRS----VDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQR 1628
              P RP  +P S        +    LE+ +   FKD+ LL+EA+TH S P  + +  YQR
Sbjct: 875  KLP-RPESMPMSKDHKKPHLIQQENLENHIGYTFKDKTLLMEALTHPSCPYDTSIQSYQR 933

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK---------- 1678
            LEF+GDAVLD LI   +   +     G +T ++ A VN    A + ++ K          
Sbjct: 934  LEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLLAFLCMQFKWAMPSPLTPS 993

Query: 1679 ----------------------------------LHVHLRHGSS-ALDRQIRDFVKEVLE 1703
                                              LHV    GSS AL R        +L 
Sbjct: 994  IDTGTETETEIISPPPKTLSLYSYLRYSPSRPLPLHVEPESGSSNALTRH-NLLCPSILH 1052

Query: 1704 ELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             L       + L     A K   D+VESI GAIF+DSG D
Sbjct: 1053 ALNNTTAYPWSLFSAIHADKFFSDVVESIIGAIFVDSGGD 1092



 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 154/309 (49%), Gaps = 23/309 (7%)

Query: 699 DGKVTPKVQSLIKILLKYQHTED--FRAIIFVERVVAALVLPKVFAELPSL-SFVKSASL 755
           D  V+PK ++LI  L+    TED  F  +IFVE+  A  V+  + +  PS     ++ S 
Sbjct: 166 DFPVSPKFEALISFLMS---TEDINFSGLIFVEQRAAVTVMSYLLSTHPSTRDRFRTGSF 222

Query: 756 IGHNNSQEMRTF-------QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           IG +NS   +T        +MQ +T+  FR GR  L+VAT V +EG+D+  C+VVI +++
Sbjct: 223 IGMSNSTNRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNI 282

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
            K   ++IQ RGRAR+  S Y +M+   +    + L   +  E+ + +  +E  D    +
Sbjct: 283 PKGFESFIQRRGRARRQNSTYSMMLSTED--DGSTLDKWQKFEKIMEEACLE--DRRRTE 338

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAV-GLIHFYCSQLPSDRYSILRPEFIMERHE 926
           +   L S+D    T + V STGA+++   A+  L+HF C  LP   Y   +PEF  ER++
Sbjct: 339 ELRALGSLDEDVCTRFCVRSTGAILTAEYAMQHLVHF-CDTLPRQNYVEDKPEFSFERND 397

Query: 927 KPGGPTEYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
             GG       L    N    + EG     + R A++     A K L+E G   D LLP 
Sbjct: 398 --GGLLRAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLPL 455

Query: 986 KGSGEQQEK 994
             S E   K
Sbjct: 456 TKSREFTRK 464



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 1601 IKFKDRGLLVEAITH--ASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            I+F+D   ++ AIT   A  P+     YQR EF GD+VL   +   LF++  N   G LT
Sbjct: 725  IQFQDLRHVITAITMPLAQAPTD----YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLT 780

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
            +   A V N    R A+   L  ++           R +   ++ E L    ++  +   
Sbjct: 781  ETLHALVQNARLTRAALDQGLDAYIISNRFT----PRKWSAPLISEKLYASASTRSM--- 833

Query: 1719 KAPKVLGDIVESIAGAIFLDSG--RDTSVVWQVFQPLLDP---MVTPETLPM 1765
             + KVL D+VE++ GA ++D G  +  S + +    +  P   +  PE++PM
Sbjct: 834  -SAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPM 884


>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
 gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
          Length = 1726

 Score =  157 bits (396), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 221/525 (42%), Gaps = 119/525 (22%)

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYC-------KNLLSPRFEHSEEQEGEGEEILDKTYYVF 1336
            + +YG  LIFK+     G     C       +NLL  R   ++++  E E +   T    
Sbjct: 1078 RSRYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQ-RQTLAKKRPAEDEILGSPTKKRI 1136

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTA 1393
            L    C I  LP S     + +P I+ R+E+ L+A +L + +   +       ++ A+T 
Sbjct: 1137 LSASHCTIDRLPASETVFGRFIPVILDRLEAALVATRLCETVLRDIQFQDLRHVITAITM 1196

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
               Q    Y+R E  GD+ LK+ V+  LF   P  HEG LT     +V N  L + AL +
Sbjct: 1197 PLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQ 1256

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL +YI ++RF P +W+AP                            L ++K Y      
Sbjct: 1257 GLDAYIISNRFTPRKWSAP----------------------------LISEKLYA----- 1283

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEE 1572
                      S+S R +S+K LADVVEALIG  Y++GG   A + +++++         E
Sbjct: 1284 ----------SASTRSMSAKVLADVVEALIGAAYIDGGLHKAQSCIVRFL--------PE 1325

Query: 1573 VGCPSRPACVPESVLRSVDFHA--------LEDALKIKFKDRGLLVEAITHASRP-SSGV 1623
            +  P      PES+  S D           LE+ +   FKD+ LL+EA+TH S P  + +
Sbjct: 1326 IELPETKLPRPESMPMSKDHKKPHLIQQENLENHIGYTFKDKTLLMEALTHPSCPYDTSI 1385

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK----- 1678
              YQRLEF+GDAVLD LI   +   +     G +T ++ A VN    A + ++ K     
Sbjct: 1386 QSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLLAFLCMQFKWAMPS 1445

Query: 1679 ---------------------------------------LHVHLRHGSS-ALDRQIRDFV 1698
                                                   LHV    GSS AL R      
Sbjct: 1446 PLTPSIDTGTETETEIISPPPKTLSLYSYLRYSPSRPLPLHVEPESGSSNALTRH-NLLC 1504

Query: 1699 KEVLEELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRD 1742
              +L  L       + L     A K   D+VESI GAIF+DSG D
Sbjct: 1505 PSILHALNNTTAYPWSLFSAIHADKFFSDVVESIIGAIFVDSGGD 1549



 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 154/309 (49%), Gaps = 23/309 (7%)

Query: 699 DGKVTPKVQSLIKILLKYQHTED--FRAIIFVERVVAALVLPKVFAELPSL-SFVKSASL 755
           D  V+PK ++LI  L+    TED  F  +IFVE+  A  V+  + +  PS     ++ S 
Sbjct: 623 DFPVSPKFEALISFLMS---TEDINFSGLIFVEQRAAVTVMSYLLSTHPSTRDRFRTGSF 679

Query: 756 IGHNNSQEMRTF-------QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           IG +NS   +T        +MQ +T+  FR GR  L+VAT V +EG+D+  C+VVI +++
Sbjct: 680 IGMSNSTNRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNI 739

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
            K   ++IQ RGRAR+  S Y +M+   +    + L   +  E+ + +  +E  D    +
Sbjct: 740 PKGFESFIQRRGRARRQNSTYSMMLSTED--DGSTLDKWQKFEKIMEEACLE--DRRRTE 795

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAV-GLIHFYCSQLPSDRYSILRPEFIMERHE 926
           +   L S+D    T + V STGA+++   A+  L+HF C  LP   Y   +PEF  ER++
Sbjct: 796 ELRALGSLDEDVCTRFCVRSTGAILTAEYAMQHLVHF-CDTLPRQNYVEDKPEFSFERND 854

Query: 927 KPGGPTEYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
             GG       L    N    + EG     + R A++     A K L+E G   D LLP 
Sbjct: 855 --GGLLRAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLPL 912

Query: 986 KGSGEQQEK 994
             S E   K
Sbjct: 913 TKSREFTRK 921



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 1601 IKFKDRGLLVEAITH--ASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            I+F+D   ++ AIT   A  P+     YQR EF GD+VL   +   LF++  N   G LT
Sbjct: 1182 IQFQDLRHVITAITMPLAQAPTD----YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLT 1237

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
            +   A V N    R A+   L  ++           R +   ++ E L    ++  +   
Sbjct: 1238 ETLHALVQNARLTRAALDQGLDAYIISNRFT----PRKWSAPLISEKLYASASTRSM--- 1290

Query: 1719 KAPKVLGDIVESIAGAIFLDSG--RDTSVVWQVFQPLLDP---MVTPETLPM 1765
             + KVL D+VE++ GA ++D G  +  S + +    +  P   +  PE++PM
Sbjct: 1291 -SAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPM 1341


>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
          Length = 1563

 Score =  156 bits (395), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 135/242 (55%), Gaps = 16/242 (6%)

Query: 278 ANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           A  +N      + ++SE ++ +  E  R YQ+++ E+AK+KN IA L TG+GKTLIA LL
Sbjct: 123 AQNLNHTSTALMVRESENRKII--ENPREYQIELFERAKRKNIIAVLPTGSGKTLIAALL 180

Query: 338 IRSICN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDA 393
           +R        D +    K +A FLV KV L  QQ  V+     + +   CG+M +  W  
Sbjct: 181 LRHTLEQETADRRAGKPKRIAFFLVEKVALALQQHAVLECNLEFPIDRVCGDMVRSDWIK 240

Query: 394 QRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH 453
           + W + +D   V+V TA IL   L  S I+M+ INLL+ DE HHA   HPY+ ++ ++Y 
Sbjct: 241 ESWMKRWDDNMVMVCTAAILQQCLARSFIRMDQINLLVFDEAHHAKGNHPYARIIKDYYI 300

Query: 454 T-TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDR----KELEK 508
           T   KE+RP +FGMTASPV+     +  D  I    LE  L S + TI++     K+++K
Sbjct: 301 TEPDKERRPKIFGMTASPVD-----ALTDVKIAAAQLEGLLHSEIATIEEDSVSFKQIQK 355

Query: 509 HV 510
            V
Sbjct: 356 EV 357



 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 220/527 (41%), Gaps = 100/527 (18%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++    VS  +NLL    +   + + EG  +     YV L P    I  LP  +V  A
Sbjct: 1002 QPVVEAELVSLRRNLL----DEFADSKHEGSRVC----YVILQP--LQISTLPVEVVAMA 1051

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------QETF--------C 1401
               P+I+ R+ES ++A+     +N  V     LEA+T  S       QE           
Sbjct: 1052 YNFPAIIHRIESNMIALDACRMLNLRVRPDLALEAMTKDSSNSEEHDQEKIDFQAGMGNN 1111

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   +  LF + P  +E +    R  ++ N  L+  AL K LQ YI++
Sbjct: 1112 YERLEFLGDCFLKMATTIALFTRIPDSNEFECHVERMLLICNQNLFNVALKKNLQEYIRS 1171

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
             +F    W   G+                 ++K+                      G+ +
Sbjct: 1172 KQFDRRSWYPQGL-----------------KQKA----------------------GKAQ 1192

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYV----EGGKDAA-----------NHLMKWIGIQV 1566
            G  +S+  L+ K++ADV EA+IG  Y+    EG  D A           NH MK      
Sbjct: 1193 GAQNSHS-LADKSIADVCEAIIGASYLSYTDEGNFDMAVRAVTAVVRNKNHDMK----SY 1247

Query: 1567 ESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS--GVS 1624
            E   +    P   A  P +V        +++ +  +FK   LL  A  H S P     V 
Sbjct: 1248 EDYYKAFKMPIWQAAEPSAVQMEASLQ-IKEQMGYEFKSPALLRSAFKHPSYPRQFESVP 1306

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR 1684
             YQRLEF+GDA+LD +    LF  + +  P  LT+ + A V+N     ++V+   +  + 
Sbjct: 1307 NYQRLEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVL 1366

Query: 1685 HGSSALDRQIRDFV---------KEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1735
            H +S +  QI+D+V          E + ++       + L     PK L D+VE+  GAI
Sbjct: 1367 HFNSIMANQIKDYVDALTHARQEAEAVAQISGTVSRDYWLNVKHPPKFLSDVVEAYIGAI 1426

Query: 1736 FLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQ 1777
            F+DSG D   V   F+  + P      L       HPV  L    QQ
Sbjct: 1427 FVDSGYDYGQVQAFFEKHIRPFFADMALYDSFASSHPVTTLARMMQQ 1473



 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 153/297 (51%), Gaps = 27/297 (9%)

Query: 702 VTPKVQSLI-KILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGH 758
           ++ KV  L+ ++ L++    D + IIFVE+   A++L  + + LP +   ++K A+L+G+
Sbjct: 467 LSSKVLCLLGQLELRFSAPTDHKCIIFVEKRNTAMILAHLLS-LPGIGPLYLKPAALVGN 525

Query: 759 --NNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
             +NS    +++ Q  TI KFR G    L+ATSVAEEG+DI  CN+VIRFDL  +V+ YI
Sbjct: 526 PSDNSPLAMSYKEQVMTITKFRRGEYNCLLATSVAEEGIDIADCNIVIRFDLFNSVIQYI 585

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           QS+GRAR   S+YI M E GN  H       R   +     ++ R   S L +  +++  
Sbjct: 586 QSKGRARHLNSEYICMAELGNGKH------TRAKIQANYDLSLIRQFCSTLPEDRKIVGW 639

Query: 876 DAVPG--------TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
           D              + V STGA ++   ++ ++  + S L  +  + L P +++     
Sbjct: 640 DPEAALHHGERDHKFHIVPSTGAKLTWTGSLVVLSNFASSLQVNDET-LSPSYMVSL--- 695

Query: 928 PGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
               +EY C++QLP  +P   + G +  +   A+ +     C KL + G  +  L P
Sbjct: 696 --IGSEYICEVQLPSKSPILSVSGTLQKNKAEARCSAAFEMCMKLIKGGFISSHLQP 750


>gi|198421916|ref|XP_002122382.1| PREDICTED: similar to rCG20888 [Ciona intestinalis]
          Length = 2053

 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 171/351 (48%), Gaps = 47/351 (13%)

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV---------ESDPEEV 1573
            D  +   L+ K++AD VEAL+G Y    G  +A  L+  +G+ V             +  
Sbjct: 1700 DLHTQHSLADKSIADCVEALLGAYLTTCGHRSAQLLLCHLGLNVLPKVAQAETSKTVDRF 1759

Query: 1574 GCPSRPA-----CVPESVLRS----VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVS 1624
            G  + P      C P    +     V     E  +   FK++  L++A THAS   + V+
Sbjct: 1760 GYLTPPTNKMLECRPNQQNKLDQLLVALSGFERKINYTFKNKAYLLQAFTHASYYYNTVT 1819

Query: 1625 -CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHL 1683
             CYQRLEF+GDAVLD LIT+HLF    +  PG LTDLR+A VNN  FA +AV +  H + 
Sbjct: 1820 DCYQRLEFLGDAVLDFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYF 1879

Query: 1684 RHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD-----------------------CKA 1720
            +  S  L   I DFV    ++    G ++  + D                        + 
Sbjct: 1880 KSISPELHHIIEDFVMYQQKQEDAQGMDAHLMRDYDRVEIVAPSSLEKDEEEGENEDVEV 1939

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQ 1778
            PK LGDI ES+AGAI++DSG D S VW+V+  ++ P++      +P  PVREL E   + 
Sbjct: 1940 PKALGDIFESVAGAIYMDSGMDLSSVWKVYSVMMLPLIEKFSACVPRSPVRELLEMEPET 1999

Query: 1779 AEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
            A+    +    G +  TVE+   G   GV ++   ++A+  AAR AL  LK
Sbjct: 2000 AKFSCAEKRYDGKVRVTVEIIGKGRFKGVGRS--YRIAKSAAARRALRYLK 2048



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 162/348 (46%), Gaps = 42/348 (12%)

Query: 724  AIIFVERVVAALVLPKVFAELP----SLSFVKSASLIGHNNSQ-------EMRTFQMQET 772
             I+FVE    A++L ++  EL     +L  V S+ L      +        M   + +E 
Sbjct: 526  GIVFVEERYVAMMLQRLLRELSKEDKNLKHVSSSHLTPGVEGERRGVDPASMDQSKQEEV 585

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            + KFR     LL+ T   E+   + +CN+++RFD+ K+  +Y +S+ RAR   S Y++++
Sbjct: 586  LRKFRSHESNLLICTGDLEDCAYMPKCNLIMRFDVPKSYRSYAESKSRARAQTSAYVMLV 645

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV-DAVPGTVYQVESTGAV 891
                 SH  F+   +  ++  +        L+ + D +    + + +P  +    +    
Sbjct: 646  RETEKSH--FMEKLQEYKKIEKVLLGPDWSLNEVYDNNEDDDIEEMIPPYIL---NRNTQ 700

Query: 892  VSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLE 950
            V++ +AV +++ YC++LPSD ++ L P   +      G    + C LQLP N+   E ++
Sbjct: 701  VNMKNAVRIVNRYCNRLPSDPFTHLSPRCEVVEVLNDGDSPMFMCILQLPINSHVREPVQ 760

Query: 951  GPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPL------ 1004
            G V  +++LAQQAV +  CK L+E G   + L+P       +E V   +E +P       
Sbjct: 761  GIVMPTLQLAQQAVAMETCKVLYEAGELDENLMPIG-----KETVKYAEELDPWKREVSS 815

Query: 1005 ----PGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVK 1048
                PG+ + R+ Y +    IL+          C      +LF+Y ++
Sbjct: 816  ITGRPGSTKKRQTYNKDSPQILR---------SCLPQPDINLFIYEIE 854



 Score = 83.6 bits (205), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 20/143 (13%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYC 1307
            RFYV  ++ +MT  SSFP  E       Y S+  YY+ KYG+++   KQPL+     S  
Sbjct: 1038 RFYVAELKDDMTPLSSFPSSE-------YESFLHYYQLKYGLDIRCLKQPLLDVDHTSSR 1090

Query: 1308 KNLLSPRFEHS----------EEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQR 1357
             NLL+PR  +           E++  + E + ++   V   PELC +HP+P SL R A  
Sbjct: 1091 LNLLTPRHLNQKGKALPMSSLEKKRAKYESLHNRQILV---PELCEVHPIPASLWRKAVC 1147

Query: 1358 LPSIMRRVESMLLAIQLKDKINY 1380
            LPS++ RV  +L+A +L+  I +
Sbjct: 1148 LPSVLYRVNQLLIAEELRKNIAF 1170



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 24/248 (9%)

Query: 275 GKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIA 334
           GK +   N +CN  +               RPYQ+++LE A K+NTI  L    GK  + 
Sbjct: 11  GKPSWTSNSQCNSFI--------------PRPYQIELLECAAKQNTIICLNGDFGKCFMY 56

Query: 335 VLLIRSIC--NDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWD 392
            + +R +   ++ +  N    AV L+ +  +V +Q+E++R      +      M   F D
Sbjct: 57  TMFLREVIIKHNGKLNNAPKFAVLLLKEDCMVNEQSELLRSHLDVDIISCTHNMTDSFTD 116

Query: 393 AQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHA-VKKHPYSLVMSEF 451
               Q   D  QVLV T ++ + +L  S+   + ++L+I D+CH   ++ HP   +M   
Sbjct: 117 ESLQQLCHD-HQVLVCTPEVFVKLLSISLYIAQYMDLVIFDDCHLVNIEMHPIRKIMKIL 175

Query: 452 YHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKH-V 510
                    P + G+T+S +N    + +++  I   ++E+ +     T  D   +++H +
Sbjct: 176 ---DENRYTPMILGLTSSLLNNNITADELNKCIH--SMETVMHCKAQTATDLIAVDRHNI 230

Query: 511 PMPSEVVV 518
             P E ++
Sbjct: 231 NPPVENII 238



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            IL+ALT ++  + F  ER E+LGD++LK  V+ +L+  YP+ HEG+L+ MR + VSN  L
Sbjct: 1461 ILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVSNYNL 1520

Query: 1447 YQYALSKGLQSYIQADRFAPS-RWAAPGVL 1475
            Y+     GL   +    F P+  W   G +
Sbjct: 1521 YRIGKQFGLAGKMTGLIFDPTVNWLPTGFV 1550



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 41/246 (16%)

Query: 1359 PSIMRRVESMLLAIQ-LKDKINYPVP-ASKILEALTAASC---QETFCYERAELLGDAYL 1413
            P+   +++ +L+A+   + KINY     + +L+A T AS      T CY+R E LGDA L
Sbjct: 1774 PNQQNKLDQLLVALSGFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQRLEFLGDAVL 1833

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
             ++++R LF        G LT +R  +V+N +    A+      Y ++         +P 
Sbjct: 1834 DFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKS--------ISPE 1885

Query: 1474 VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS-------- 1525
            +  + +      D  ++ Q++   ED  G D +       D +  E+   SS        
Sbjct: 1886 LHHIIE------DFVMYQQKQ---EDAQGMDAHLMR----DYDRVEIVAPSSLEKDEEEG 1932

Query: 1526 -SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPE 1584
             +  V   K L D+ E++ G  Y++ G D ++ + K   + +    E+       ACVP 
Sbjct: 1933 ENEDVEVPKALGDIFESVAGAIYMDSGMDLSS-VWKVYSVMMLPLIEKFS-----ACVPR 1986

Query: 1585 SVLRSV 1590
            S +R +
Sbjct: 1987 SPVREL 1992



 Score = 45.8 bits (107), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            GL+++A+T  S  S G +  +RLE +GD+ L H +T +L+ +Y     G+L+ +R+  V+
Sbjct: 1459 GLILQALT-LSNASDGFN-LERLEMLGDSFLKHAVTVYLYCTYPESHEGKLSYMRSKKVS 1516

Query: 1667 NENFARVA 1674
            N N  R+ 
Sbjct: 1517 NYNLYRIG 1524


>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
            Full=Endoribonuclease dcl2; Includes: RecName:
            Full=ATP-dependent helicase dcl2
          Length = 1429

 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 218/520 (41%), Gaps = 109/520 (20%)

Query: 1284 KQKYGVELIFKKQPLIRGRGVSYC-------KNLLSPRFEHSEEQEGEGEEILDKTYYVF 1336
            + +YG  LIFK+     G     C       +NLL  R   ++++  E E +   T    
Sbjct: 781  RSRYGELLIFKRWLNRSGDLELECDPYPSKRRNLLQ-RQTLAKKRPAEDEILGSPTKKRI 839

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTA 1393
            L    C I  LP S     + +P I+ R+E+ L+A +L + +   +       ++ A+T 
Sbjct: 840  LSASHCTIDRLPASETVFGRFIPVILDRLEAALVATRLCETVLRDIQFQDLRHVITAITM 899

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
               Q    Y+R E  GD+ LK+ V+  LF   P  HEG LT     +V N  L + AL +
Sbjct: 900  PLAQAPTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETLHALVQNARLTRAALDQ 959

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL +YI ++RF P +W+AP                            L ++K Y      
Sbjct: 960  GLDAYIISNRFTPRKWSAP----------------------------LISEKLYA----- 986

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                      S+S R +S+K LADVVEALIG  Y++GG   A   +  +    E +  E 
Sbjct: 987  ----------SASTRSMSAKVLADVVEALIGAAYIDGGLHKAQSCI--VRFLPEIELPET 1034

Query: 1574 GCPSRPACVPESVLRS----VDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQR 1628
              P RP  +P S        +    LE+ +   FKD+ LL+EA+TH S P  + +  YQR
Sbjct: 1035 KLP-RPESMPMSKDHKKPHLIQQENLENHIGYTFKDKTLLMEALTHPSCPYDTSIQSYQR 1093

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK---------- 1678
            LEF+GDAVLD LI   +   +     G +T ++ A VN    A + ++ K          
Sbjct: 1094 LEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLLAFLCMQFKWAMPSPLTPS 1153

Query: 1679 ----------------------------------LHVHLRHGSS-ALDRQIRDFVKEVLE 1703
                                              LHV    GSS AL R        +L 
Sbjct: 1154 IDTGTETETEIISPPPKTLSLYSYLRYSPSRPLPLHVEPESGSSNALTRH-NLLCPSILH 1212

Query: 1704 ELLKPGFNSFGL-GDCKAPKVLGDIVESIAGAIFLDSGRD 1742
             L       + L     A K   D+VESI GAIF+DSG D
Sbjct: 1213 ALNNTTAYPWSLFSAIHADKFFSDVVESIIGAIFVDSGGD 1252



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 154/309 (49%), Gaps = 23/309 (7%)

Query: 699 DGKVTPKVQSLIKILLKYQHTED--FRAIIFVERVVAALVLPKVFAELPSL-SFVKSASL 755
           D  V+PK ++LI  L+    TED  F  +IFVE+  A  V+  + +  PS     ++ S 
Sbjct: 326 DFPVSPKFEALISFLMS---TEDINFSGLIFVEQRAAVTVMSYLLSTHPSTRDRFRTGSF 382

Query: 756 IGHNNSQEMRTF-------QMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           IG +NS   +T        +MQ +T+  FR GR  L+VAT V +EG+D+  C+VVI +++
Sbjct: 383 IGMSNSTNRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNI 442

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
            K   ++IQ RGRAR+  S Y +M+   +    + L   +  E+ + +  +E  D    +
Sbjct: 443 PKGFESFIQRRGRARRQNSTYSMMLSTED--DGSTLDKWQKFEKIMEEACLE--DRRRTE 498

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAV-GLIHFYCSQLPSDRYSILRPEFIMERHE 926
           +   L S+D    T + V STGA+++   A+  L+HF C  LP   Y   +PEF  ER++
Sbjct: 499 ELRALGSLDEDVCTRFCVRSTGAILTAEYAMQHLVHF-CDTLPRQNYVEDKPEFSFERND 557

Query: 927 KPGGPTEYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD 985
             GG       L    N    + EG     + R A++     A K L+E G   D LLP 
Sbjct: 558 --GGLLRAKVILPSSVNPKVRRAEGKAWWKTERAAKKEAAFYAYKALYEHGLVNDNLLPL 615

Query: 986 KGSGEQQEK 994
             S E   K
Sbjct: 616 TKSREFTRK 624



 Score =  115 bits (287), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 125/246 (50%), Gaps = 24/246 (9%)

Query: 293 SEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKM 352
           S  +E+  E +AR YQL++ E + K N I  + TG+GKT IA+L    I ++L+  + K+
Sbjct: 3   SIPEERSAEHRARSYQLEMFEASLKGNIIVVMGTGSGKTQIALL---RIIHELENSDGKL 59

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGYVVGH-YCGEMGQDFWDAQR-WQREFDTKQVLVMTA 410
           +  FL P VPL  QQ  VI +    V      G    + W  Q  W    +  QV+V T 
Sbjct: 60  IW-FLAPTVPLCLQQHRVISQHIPAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTP 118

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE----KRPSVFGM 466
            +L + + H  +++  + LLI DE HH ++KHP +++M  FYH   +E      P + G+
Sbjct: 119 AVLHDAMTHGFVRISRLGLLIFDEAHHCIRKHPTNMIMRNFYHPALQEYGPGAVPRILGL 178

Query: 467 TASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYD---- 521
           TAS     G S +      +  +E  L+SV  T +  R+EL ++  MP    V Y     
Sbjct: 179 TAS----AGSSRE-----GLQTIEMNLNSVCTTPQAHRQELLEYTHMPELRRVLYTPLMK 229

Query: 522 KAASLW 527
           + ASLW
Sbjct: 230 ENASLW 235



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 1601 IKFKDRGLLVEAITH--ASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            I+F+D   ++ AIT   A  P+     YQR EF GD+VL   +   LF++  N   G LT
Sbjct: 885  IQFQDLRHVITAITMPLAQAPTD----YQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLT 940

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
            +   A V N    R A+   L  ++           R +   ++ E L    ++  +   
Sbjct: 941  ETLHALVQNARLTRAALDQGLDAYIISNRFT----PRKWSAPLISEKLYASASTRSM--- 993

Query: 1719 KAPKVLGDIVESIAGAIFLDSG--RDTSVVWQVFQPLLDP---MVTPETLPM 1765
             + KVL D+VE++ GA ++D G  +  S + +    +  P   +  PE++PM
Sbjct: 994  -SAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPEIELPETKLPRPESMPM 1044


>gi|413948832|gb|AFW81481.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
          Length = 285

 Score =  155 bits (393), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 127/221 (57%), Gaps = 2/221 (0%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E  L+ +F DR LL EA+TH S  S G   YQRLEFVGDA L    +  L+ +   L P
Sbjct: 44   VERLLRYQFCDRALLEEALTHQSF-SDGALSYQRLEFVGDAALGLAFSNFLYLTNPTLGP 102

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP-GFNSF 1713
            G L+ LRAA ++ E  ARVAV+H L+  LR     LD  +  F++ V +EL+       +
Sbjct: 103  GALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFIESVKQELMHDLATAPY 162

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQE 1773
            G    KAPKVL DIVE+IA A+++D   D   +W+V + L +P++T ET+   PV  L E
Sbjct: 163  GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVTTLHE 222

Query: 1774 RCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKM 1814
             CQ+  +  ++K  +   +  V V++ G  VG+  + QK +
Sbjct: 223  LCQKHGKVAQFKTWQKDGMIVVNVFVGGEMVGLGSSEQKSL 263


>gi|225563402|gb|EEH11681.1| dicer-like protein [Ajellomyces capsulatus G186AR]
          Length = 1436

 Score =  155 bits (392), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 198/447 (44%), Gaps = 90/447 (20%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSI+  VE  LLA +L   I  PV     S ++ A++A+
Sbjct: 878  PASDCSIDKLPLEYSMFALLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSLVITAISAS 937

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  +  L    P  HEG L+R +  +VSN  L   A+  G
Sbjct: 938  VAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYAAIETG 997

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W  P                               +K++ E E+ D
Sbjct: 998  LDKFILLDVFTGAKWRPP------------------------------CNKDHLESEEQD 1027

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            +   E+          S+KTLADVVEAL+    ++GG+  A   ++    +++  P E  
Sbjct: 1028 VPQREM----------STKTLADVVEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDR 1077

Query: 1575 CPSRPACVPESVLRSVD--FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +  + VPE+   ++   F  +E  +   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1078 VNALYSSVPEAYENTLTSWFQEVESLVGYVFNKKVFLVQAFTHPSNPGSKTSSYQRLEFV 1137

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------------NE 1668
            GDA+LDH+I  HLF +    P   +  +R A  N                         E
Sbjct: 1138 GDAILDHIIVYHLFNAPRTFPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKE 1197

Query: 1669 NFARVAVKHKLHV--HLRHGSS----ALDRQ-------IRDFVKEVLEELLKPGFNSFG- 1714
            N +     HK+ +  ++RHG+S    A  +Q       ++  + E LE     G +++  
Sbjct: 1198 NTSTTLTTHKVSLWQYMRHGTSWELTAAQQQTANQYETLQADISEALE-----GSHTYPW 1252

Query: 1715 --LGDCKAPKVLGDIVESIAGAIFLDS 1739
              L    A K   D++ES+ GAIF+DS
Sbjct: 1253 TLLSRLHAQKFFSDLIESVLGAIFIDS 1279



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 156/320 (48%), Gaps = 22/320 (6%)

Query: 701  KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSA 753
            +V+ K   LI +L K ++T DF  IIF ++     +L  + +  P L       +F+  +
Sbjct: 346  RVSGKANLLIDLLEK-EYTSDFTGIIFAQQRSTVTMLAHLISRHPRLKHMFVSGAFLGDS 404

Query: 754  SLIGHNNSQ-EMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
               G  ++  E+   + Q+ +I   R G+  LL+ATSV EEG+D+  C++VI FD    +
Sbjct: 405  GYAGRTSTIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVICFDTINNL 464

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSR 871
             ++IQ RGRARK  S +++ +   + S      N     E + K   E  D+  L+D   
Sbjct: 465  RSFIQRRGRARKERSKFVMFLNGDDNSQG----NKWTKMEDVMKSMYEE-DMRRLEDVWA 519

Query: 872  LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
              +V+      +++ESTGA+++  +A   +  +C+ L  + ++  RP F+   +E  G  
Sbjct: 520  KENVEEESDEDHRIESTGALLTFENARPHLEHFCATLQCE-FTDTRPVFMFRENELDGMV 578

Query: 932  TEYSCKLQLP--CNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
            T    K+ LP   +  F  ++G     + +LAQ+     A  KL++ G   D LLP    
Sbjct: 579  T---AKVLLPNVLDPKFRVIKGSKWWRTDQLAQRDAAFQAYLKLYQEGLVNDHLLPVHCM 635

Query: 989  GEQQEKVDQNDEGEPLPGTA 1008
              +   ++ +++G  L   A
Sbjct: 636  TMEHPALEYSEKGPNLVKVA 655



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 5/160 (3%)

Query: 277 EANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVL 336
           E+N +  +     G         P  + R YQL++LE + ++N I  ++TG+GKT +A+L
Sbjct: 20  ESNHVLADSKLVTGVIENGLNSTPVIKPRAYQLEMLEASLRENIIIAMDTGSGKTQVAIL 79

Query: 337 LIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQ-TGYVVGHYCGEMGQDFWDAQR 395
            IR   ++L+         FL P V L  QQ + I EQ + Y      G    ++W  ++
Sbjct: 80  RIR---HELETCAAHKFVWFLTPTVALAEQQHKSISEQLSAYETRLLLGSDNVNYWSTKK 136

Query: 396 -WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDE 434
            W       +++V T Q+LL+ + H  + M  I LL+ DE
Sbjct: 137 IWDDILLNIRIVVSTPQVLLDAMTHGFVTMPQIALLVFDE 176


>gi|240275433|gb|EER38947.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
          Length = 896

 Score =  155 bits (391), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 118/219 (53%), Gaps = 22/219 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK  N IA L+T                 D    N   ++ FLV  V LV
Sbjct: 94  REYQLELFEKAKAANIIAVLDTA----------------DRASGNPPRISFFLVDSVTLV 137

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           YQQA V++      +  +CG M  D W  + W++ F    ++V TA++L   L  S I+M
Sbjct: 138 YQQAAVLKANIDQNIDKFCGAMQTDLWSKETWEKHFSKNMIIVCTAEVLYQCLLRSFIRM 197

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQVDCA 483
           E INLLI DE HHA K+HPY+ ++ +FY      +KRP +FGMTASPV+ K     VD A
Sbjct: 198 EQINLLIFDEAHHAKKEHPYARIVKDFYLRRPETQKRPKIFGMTASPVDAK-----VDVA 252

Query: 484 IKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK 522
               NLE+ LDS + T  +   L + +  P+E +  YDK
Sbjct: 253 KAAKNLETLLDSQIATASNLDALRQAIARPTEQIWVYDK 291



 Score = 76.3 bits (186), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 803 IRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIER 860
           I FDL+ T++ YIQSRGRAR   S Y  M+ER NL HA+ ++ A+ +E  +R+  EA+  
Sbjct: 422 IVFDLSLTMIQYIQSRGRARHSNSIYAHMVERDNLIHASCIQEAQRAEHIMRRFCEALPE 481

Query: 861 TDLSHLKDTSRLISVDAVPGTVYQ---VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
             +  ++ +S  + ++      Y+   V STGA ++  S++ ++  Y S L  ++ +  +
Sbjct: 482 DRI--IRGSSDDLGMNLDKERYYKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETSPQ 539

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
             + +ER +  G    + C+  LP  +PF  L G   +    A+Q+     C  L + G 
Sbjct: 540 VNYFIERID--GA---FVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGI 594

Query: 978 FTDMLL 983
             D  L
Sbjct: 595 LDDHFL 600


>gi|167046022|gb|ABZ10542.1| dicer-like protein B [Placozoa sp. DMJ-2008]
          Length = 357

 Score =  155 bits (391), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 182/376 (48%), Gaps = 41/376 (10%)

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            L+ALT A   + F  E  E LG +YLK+ VS   FL Y + HEGQL+ ++ ++VSN  LY
Sbjct: 1    LKALTLARANDDFNLETLEFLGGSYLKYAVSISFFLSYSKFHEGQLSSLKSKIVSNENLY 60

Query: 1448 QYALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
            Q  +  GL  YI       +  W  PG       D+   +  L     S+      T K 
Sbjct: 61   QIGIKMGLPGYIIGHNVDQNDIWVPPGFSIAKKSDSIGLEEQLSTLNLSMTSRVHPTQK- 119

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLM-KWIGIQ 1565
                                   L +K +ADV+EAL+G   +E G+++AN+ +   +GI+
Sbjct: 120  -----------------------LKNKCIADVMEALLGGILLELGENSANNFITNNLGIK 156

Query: 1566 VESDPEEVGCPSRPACVPES-VLRSVDFHALEDALKIKFKDRGLLVEAITHAS----RPS 1620
            V      +      A    S +  + +   LE  L   FKDR LL+ A+THA+    R +
Sbjct: 157  VGRLSHNIAKLDDDARKEISKIYNAHNLKDLEAVLGYSFKDRKLLISALTHATYNHNRIA 216

Query: 1621 SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH 1680
             GV CYQRLEF+GDA+L +++ +H + +  N  P  L D   A++ NE+ A + + + +H
Sbjct: 217  EGVECYQRLEFLGDAILQYIVVRHCYHANNNYKPADLHDFVEASLQNESLAAMTMVYGIH 276

Query: 1681 VHLRHGSSALDRQIRDFVK-----EVLEELL----KPGFNSFGLGD-CKAPKVLGDIVES 1730
             +  + S +L  QI   ++     E  E+ L    K    S  L D    PK LGD+ ES
Sbjct: 277  KYFFYNSPSLFSQINQLLQIVDTNEECEQRLSTEEKALVYSNSLKDGVMIPKPLGDLFES 336

Query: 1731 IAGAIFLDSGRDTSVV 1746
            + GAIF+D GR   VV
Sbjct: 337  LIGAIFIDCGRSIEVV 352


>gi|325093360|gb|EGC46670.1| dicer-like protein [Ajellomyces capsulatus H88]
          Length = 1436

 Score =  154 bits (389), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 193/442 (43%), Gaps = 80/442 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSI+  VE  LLA +L   I  PV     S ++ A++A+
Sbjct: 878  PASDCSIDKLPLEYSMFALLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSLVITAISAS 937

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            + +E   Y+R E LGD+ LK+  +  L    P  HEG L+R +  +VSN  L   A+  G
Sbjct: 938  AAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYAAIETG 997

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W  P                               +K++ E E+  
Sbjct: 998  LDKFILLDVFTGAKWRPP------------------------------CNKDHLESEEQG 1027

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            +   E+          S+KTLADVVEAL+    ++GG+  A   ++    +++  P E  
Sbjct: 1028 VPQREM----------STKTLADVVEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDR 1077

Query: 1575 CPSRPACVPESVLRSVD--FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +  + VPE+   ++   F  +E  +   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1078 VNALYSSVPEAYENTLTSWFQEVESLVGYVFNKKVFLVQAFTHPSNPGSKTSSYQRLEFV 1137

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF +   LP   +  +R A  N +  A + +                 
Sbjct: 1138 GDAILDHIIVYHLFNAPRTLPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKE 1197

Query: 1676 ---------KHKLHVHLRHGSS--------ALDRQIRDFVKEVLEELLKPGFNSFG-LGD 1717
                     K  L  ++RHG+S            Q +    ++ E L K     +  L  
Sbjct: 1198 NTSTKLTTRKVSLWQYMRHGTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSR 1257

Query: 1718 CKAPKVLGDIVESIAGAIFLDS 1739
              A K   D++ES+ GAIF+DS
Sbjct: 1258 LHAQKFFSDLIESVLGAIFIDS 1279



 Score =  100 bits (250), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 148/296 (50%), Gaps = 22/296 (7%)

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSA 753
           +V+ K   LI +L K ++T DF  IIF ++     +L  + +  P L       +F+  +
Sbjct: 346 RVSGKANLLIDLLEK-EYTSDFTGIIFAQQRSTVTMLAHLISRHPRLKHMFLSGAFLGDS 404

Query: 754 SLIGHNNSQ-EMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
              G  ++  E+   + Q+ +I   R G+  LL+ATSV EEG+D+  C++VI FD    +
Sbjct: 405 GYAGRTSTIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVICFDTINNL 464

Query: 812 LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSR 871
            ++IQ RGRARK  S +++ +   + S         +  +++ +E     D+  L+D   
Sbjct: 465 RSFIQRRGRARKERSKFVMFLNGDDNSQGKKWTKMEDVMKSMYEE-----DMRRLEDVWA 519

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
             +V+      +++ESTGA+++  +A   +  +C+ L  + ++  RP F+   +E  G  
Sbjct: 520 KENVEEESDEDHRIESTGALLTFENARPHLEHFCATLQCE-FTDTRPVFMFRENELDGMV 578

Query: 932 TEYSCKLQLP--CNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           T    K+ LP   +  F  ++G     + +LAQ+     A  KL++ G   D LLP
Sbjct: 579 T---AKVLLPNVLDPKFRVIKGSKWWRTEQLAQRDAAFQAYLKLYQEGLVNDHLLP 631



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 300 PEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           P  + R YQL++LE + ++N I  ++TG+GKT +A+L IR   ++L+         FL P
Sbjct: 43  PVIKPRAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIR---HELETCAAHKFVWFLTP 99

Query: 360 KVPLVYQQAEVIREQ-TGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNIL 417
            V L  QQ + I +Q + Y      G    ++W  ++ W       +++V T Q+LL+ +
Sbjct: 100 TVALAEQQHKSISQQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAM 159

Query: 418 RHSIIKMEAINLLILDE 434
            H  + M  I LL+ DE
Sbjct: 160 THGFVTMPQIALLVFDE 176


>gi|409080003|gb|EKM80364.1| hypothetical protein AGABI1DRAFT_128037 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1365

 Score =  154 bits (389), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 245/566 (43%), Gaps = 57/566 (10%)

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
            N  +P G L      A    ++ R   A     R+ +  IR +MT  S    K G    L
Sbjct: 820  NWAVPFGDLTQLRKEAEDALIQDR---AVEFTNRYEILCIREDMTPTSEVEGKGGKTL-L 875

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            E      Y ++K    L    QP++    +    N L+P     E         L     
Sbjct: 876  EQC----YSRRKNFEGLAHPNQPILEVMRMPAPTNYLNPPISQLE---------LPAKTT 922

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDK-INYPVPASKILEALTA 1393
             +L PE C    +  S +R    LPSI+RR++  LL  QL  K +N+ V    ++ A ++
Sbjct: 923  QYLIPECCRRLTVSASTLRMGYLLPSIIRRIDEFLLIKQLNAKNLNHCVKDDLLIMATSS 982

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
                  + YER ELLGDA LK++ + ++F++     EG+L   RQ+ +SN  L       
Sbjct: 983  PLAGNDYNYERLELLGDALLKYLSTTYVFVQNLNGTEGELHTARQRFISNRQLCDIVSGW 1042

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDG--------DSSLFDQEKSVAEDKLGTDK 1505
            GL  YIQ   F    W  PG+  + D+  K+         D  L  +     ED++G  K
Sbjct: 1043 GLPGYIQLKPFNIKSWLPPGM--IIDDRQKESTVGGGVMDDGHLNMRPAQPNEDRIGASK 1100

Query: 1506 NYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
                      ++ +   +  +   +++KT+ADV EA+IG  Y+ GG+D+A    K + I 
Sbjct: 1101 R--------PKNKKRRLNKKTSSPIANKTVADVAEAIIGAAYISGGRDSALKATKALMIP 1152

Query: 1566 VESDPEEVGCPSRPACVPE----SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
              +D EE     R A  P             H +E     +F+   LL   +T  S    
Sbjct: 1153 F-TDVEEWADFGRKASAPRLDTGHAPEPSVMHFIETITGFRFQQPSLLRLTLTQNSM--- 1208

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH- 1680
             +  +QRLEF+GDAVLD L+ ++L+    +  PG L+ +++  V+N   A + V   LH 
Sbjct: 1209 EMKDHQRLEFLGDAVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLHR 1268

Query: 1681 -VHLRHGSSALDRQIRDFVK--------EVLEELLKPGFNSFGLGDCKAPKVLGDIVESI 1731
             VH+R     +   + D+ K        E      +    ++   D   PKVL D++ESI
Sbjct: 1269 FVHVRQQQKQV---VWDYEKALRGREAAETSSTSKEAARVTYFWMDLDVPKVLSDVIESI 1325

Query: 1732 AGAIFLDSGRDTSVVWQVFQPLLDPM 1757
             GA ++      + V  +F  +L P 
Sbjct: 1326 IGAAYISDDFSQAGVEVIFDKMLLPF 1351



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 22/297 (7%)

Query: 720  EDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRD 778
            ++FR IIFV+ R+VA L++  +   +P L F++  SL  +    +   F+      +F  
Sbjct: 381  DNFRGIIFVQKRIVAQLLVALIHISMPRLQFLRPISLTNYRVLSDSEAFE--RMTQQFVS 438

Query: 779  GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN-L 837
            G   LL+AT   E+   + +  VVI FD+ ++ ++   +R  A   G   I M+E+GN L
Sbjct: 439  GEYNLLIATKSFEDA-GLPKAPVVILFDVFESQISRAYTRRCASVQGGYLIHMLEQGNSL 497

Query: 838  SHATFLRNARNSE-----ETLRKEAIERTDLSHLKDTSRLISVDAVPG---TVYQVESTG 889
             H     +A + E      TL  +   R      ++++   S D+       V Q   TG
Sbjct: 498  HHYALSHSALDPEMIRWATTLENDYFNRAPPQPPQESNDPYSSDSEDDRDLEVIQDPITG 557

Query: 890  AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
              +  N +    H Y ++  +        +F+ ++       +E+ C++ L    P + +
Sbjct: 558  HHIRKNQSTIAFHRYAARADAQTKCEDLFKFVSQKSTY----SEWRCRINL-AGTPVDGV 612

Query: 950  EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPG 1006
             GP   +  LA++  C  AC +L   G              +  KV+ +DE    PG
Sbjct: 613  SGPAAPTKALARKEACYIACLRLQHFGLLDSAFF----FRTRARKVESHDETFDCPG 665


>gi|195996287|ref|XP_002108012.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
 gi|190588788|gb|EDV28810.1| hypothetical protein TRIADDRAFT_52058 [Trichoplax adhaerens]
          Length = 915

 Score =  154 bits (388), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 194/423 (45%), Gaps = 73/423 (17%)

Query: 1358 LPSIMRRV-ESMLLAIQLKDKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKW 1415
             P   RR+  S L + + K  +  P P+ S +L+ALT+ S  + F +ER E+LGD+YLK+
Sbjct: 440  FPKFHRRLLHSKLKSNRNKAVLKRPGPSVSMLLQALTSLSADDFFNHERLEILGDSYLKF 499

Query: 1416 VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL 1475
            + +   F + P   EG ++ MR   VSN  L + +  KGL  Y     F   +W  PG  
Sbjct: 500  ITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKGLTLYQFNTPFKLKQWLPPGFT 559

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYR-VLSSKT 1534
             + +                          N N   ++ + DG  + DS S++ V+S K 
Sbjct: 560  CIRN--------------------------NANLVANNMLTDGSKQRDSESFKQVMSVKN 593

Query: 1535 LADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-----------EVGCPSRPACVP 1583
            ++D VE L+GVY +  G   A  L+ WIG+ +  DP            E+        + 
Sbjct: 594  ISDTVEGLVGVYSLASGPVDAARLLPWIGLDI--DPNVLIEKDKSVNFEIPTTDEDIQLS 651

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
              +LR+ D+         +F +   L  A TH+S  S     YQRLE++GDA+L++L+ +
Sbjct: 652  SCILRNTDY---------QFNNFYWLRIAFTHSSVASEN---YQRLEYLGDAILEYLLIE 699

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR-HGSSALDRQIRDFVKEVL 1702
             ++       PG+++  ++    N+ F+ +A+  + + H+R H    LD  I D ++   
Sbjct: 700  FVYCRKPYFGPGKISHFKSVMTRNQTFSLIAIAFQFYTHIRCHSKLKLD--IMDSIQNFK 757

Query: 1703 EELL-------KPGFNSFG-----LGDC----KAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
            E LL       +P    F      L       K PKV  D+ E+   AI+LD G+    V
Sbjct: 758  EILLDNHQDDHQPDIGHFANLAYQLYTSNRYQKLPKVCADVFEAFIAAIYLDCGKKLRTV 817

Query: 1747 WQV 1749
            W+V
Sbjct: 818  WKV 820



 Score = 48.1 bits (113), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 1277 SSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVF 1336
            +++ DYYK +Y +++  K+Q L+  R +    N+L  +F        + ++     ++V 
Sbjct: 225  ATFYDYYKNQYSIDISDKEQKLVCLRKIPSNNNMLK-KFHRILTLTSKSKQ---SPHFV- 279

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI 1378
              PEL  IHPL  S       LPSI+ RVES+L   +L+ KI
Sbjct: 280  --PELLAIHPLSASRFMTTVCLPSILFRVESLLSVDELRLKI 319


>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
 gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
          Length = 1497

 Score =  154 bits (388), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 120/215 (55%), Gaps = 9/215 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++ E+AK++NTIA L TG+GKTLIA+LL++ I      D +R  +  ++ FLV  
Sbjct: 84  RDYQIELYERAKEENTIAVLATGSGKTLIAILLLKHIIRNELIDRERGQRHRISFFLVDS 143

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V LV+QQ  V++      V    G+MG D W+   W   F    V+V TA I++  L  S
Sbjct: 144 VTLVFQQTAVLKNNLDQAVASLFGDMGLDLWNEDVWMDYFTKNMVIVCTADIVVQCLLQS 203

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I ME INLLI DE HHA K+H Y+ +M E Y     E RP +FGMTASP++ K      
Sbjct: 204 YITMEDINLLIFDEAHHAKKEHAYARIMREGYLKAKPECRPRIFGMTASPLDAKR----- 258

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSE 515
           D       LES L S + T  +   L + V  P E
Sbjct: 259 DPVKAAQELESLLHSKIATASNLTLLRQVVGRPEE 293



 Score =  131 bits (329), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 188/439 (42%), Gaps = 63/439 (14%)

Query: 1344 IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC------- 1396
            I  +P ++       P+I+ R++S L+A +    +   +     LEA+T  S        
Sbjct: 976  ISAIPATVAASCFAFPAIITRIDSYLVAHECASLLGLEIQLGYALEAVTKDSDNTEEHRL 1035

Query: 1397 -QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
             Q  F       YER E LGD +LK   S  LF+  P   E  L   R  ++ N  L+  
Sbjct: 1036 EQIQFQRGMGKNYERLEFLGDCFLKMATSISLFVGSPNDQEFDLHVNRMTLICNRNLFNT 1095

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A  + +  YI++  F+   W   G+                     +   K   DK    
Sbjct: 1096 AKERKIYEYIRSKGFSRRNWYPEGM--------------------KLLRGKANEDKA--- 1132

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGK-DAANHLMKWIGIQVES 1568
                          S+    L  KT+ADV EALIG   + GG  +  +  +K +   V S
Sbjct: 1133 --------------STHTHGLGEKTIADVCEALIGASLLSGGPVNRFDMAVKAVTRLVNS 1178

Query: 1569 DPEEV----GCPSRPACVPESVLRSVDF-----HALEDALKIKFKDRGLLVEAITHASRP 1619
            D   V    G  S  +     +  +  F     + ++  L  +FK   LL  A TH S P
Sbjct: 1179 DLHNVESWAGYSSHYSLPSYQIKEANGFEKDLANQIDKKLGYRFKYPRLLRSAFTHPSYP 1238

Query: 1620 S--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
            +  S V CYQRLEF+GD++LD +  ++L+  + +  P  LT+ + A V+N+    +AV+ 
Sbjct: 1239 TAWSIVPCYQRLEFLGDSLLDMVCIENLYERFPDRDPQWLTEHKMAMVSNKFLGSLAVRL 1298

Query: 1678 KLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFL 1737
             LH HL++ S+ L  +I   V++            F +     PK L D+VE+  GAIF+
Sbjct: 1299 DLHTHLQYFSNPLQGRIAQAVEDAQLAYESHQSVDFWIMIEDPPKCLSDMVEAYLGAIFV 1358

Query: 1738 DSGRDTSVVWQVFQPLLDP 1756
            DSG D  V+   +   + P
Sbjct: 1359 DSGFDFGVIESFYAKHIKP 1377



 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 149/295 (50%), Gaps = 22/295 (7%)

Query: 694 GAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPS------ 746
           G A+ + +++ KV+ L + L K ++   + + I+F ++   A +L  VF +L        
Sbjct: 400 GPAILE-QLSEKVRVLYQHLTKRFEEAPNTKCIVFTKQRNTAKLLEVVFKQLSVPHMRPG 458

Query: 747 -LSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
            L  + S  + G N++      Q + TI +FR G +  L ATSVAEEGLDI  CN+V+RF
Sbjct: 459 VLVGIGSGDICGMNSTYPQ---QFKATI-EFRKGELNCLFATSVAEEGLDIPDCNLVVRF 514

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAI-ERTD 862
           DL +T++ Y+QSRGRAR+  S Y  MIE  N+ H T L     +EE +R+  EA+ E   
Sbjct: 515 DLYETLIQYVQSRGRARRSESIYAHMIEIDNMEHETKLDEVHQTEELMRRFCEALPEDRL 574

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI-LRPEFI 921
           L +  D    I         Y++ESTGA ++ +SA+ ++  Y S L  +       P ++
Sbjct: 575 LGNNNDALSAILEKDSRKRQYKIESTGATLTYHSAIMVLARYASSLQYENNETGSHPHYV 634

Query: 922 MERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
             + +       Y C++ LP  +P   L G       LA+Q+     C  L   G
Sbjct: 635 TTQIKG-----MYECEVILPKGSPIRGLMGKPEPRKSLAKQSAAFETCILLRNNG 684


>gi|224116530|ref|XP_002317324.1| predicted protein [Populus trichocarpa]
 gi|222860389|gb|EEE97936.1| predicted protein [Populus trichocarpa]
          Length = 217

 Score =  153 bits (387), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 129/210 (61%), Gaps = 6/210 (2%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  L  KFK++  L EA+TH+S   S  + YQR+EF+GDA L   ++ +++ +Y  L 
Sbjct: 7    AVEKILNYKFKNKRHLEEALTHSSYTDS--ASYQRMEFLGDAALGLALSNYVYLAYPQLD 64

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            PG L+ LRAA ++ E  ARVA+KH L+  +RH ++ALD ++++F   V  E        +
Sbjct: 65   PGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFSDAVSGEDDDDAL-VY 123

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G G  KAPK+L DIVES+A A+++D   D    W +F+ +L+P+VT E L     PV  L
Sbjct: 124  G-GSIKAPKILADIVESVAAAVYVDVDFDLQTFWVIFRGILEPIVTLEDLQQQPQPVTML 182

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDG 1801
             ERCQ+Q + ++ K  ++   +   VY+DG
Sbjct: 183  FERCQKQGKNVDIKHWKNEAKSIASVYVDG 212



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 38/188 (20%)

Query: 1378 INYPVPASKILE-ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRM 1436
            +NY     + LE ALT +S  ++  Y+R E LGDA L   +S +++L YPQ   G L+ +
Sbjct: 12   LNYKFKNKRHLEEALTHSSYTDSASYQRMEFLGDAALGLALSNYVYLAYPQLDPGHLSLL 71

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSV 1496
            R   +S   L + A+  GL  +++ +                        ++L D+ K  
Sbjct: 72   RAANISTEKLARVAIKHGLYRFVRHNA-----------------------TALDDKVKEF 108

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
            ++   G        EDDD  D  + G S    + + K LAD+VE++    YV+   D   
Sbjct: 109  SDAVSG--------EDDD--DALVYGGS----IKAPKILADIVESVAAAVYVDVDFDLQT 154

Query: 1557 HLMKWIGI 1564
              + + GI
Sbjct: 155  FWVIFRGI 162


>gi|425768112|gb|EKV06652.1| Dicer-like protein 2 [Penicillium digitatum Pd1]
 gi|425769791|gb|EKV08273.1| Dicer-like protein 2 [Penicillium digitatum PHI26]
          Length = 796

 Score =  153 bits (386), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 230/539 (42%), Gaps = 109/539 (20%)

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
            +NLL  R  +  E   +GE    K  YV LP   C I  LP         + +I+ R+E+
Sbjct: 271  RNLLQKRALNVAE---DGEADAPKKSYV-LPAVACVIDKLPAKQGLFGLFISAILDRLEA 326

Query: 1368 MLLAIQLKDKINYPVPASKI---LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
             L+A +L D I   V    I   + A++A   Q +  Y+R E  GD+ LK+ VS  LF +
Sbjct: 327  SLVAHRLNDTILKGVGIQNIDHVITAISAPIAQASTNYQRFEFFGDSVLKFTVSCQLFFR 386

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
                HEG L+  R ++V N  L   AL  G+  +I   RF P +WAAP +          
Sbjct: 387  NTNWHEGYLSESRDKLVQNTRLAHAALDIGIDCFILTSRFTPRKWAAPLI---------- 436

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                                              +LE  S++ R +S+K LADVVE+LIG
Sbjct: 437  --------------------------------RNKLEA-STAKRSISTKVLADVVESLIG 463

Query: 1545 VYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFK 1604
              YV+GG   A   +     +++    E+   + P     S L  ++ H L   +   FK
Sbjct: 464  AAYVDGGIRKAQACLHRFLPEIDLFTTEISPLTLPPSKGASSL--INHHRLAGLIGYTFK 521

Query: 1605 DRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
            D  LL EA+THAS    +    YQRLEF+GDAVLD ++   +      +  G +T L+ +
Sbjct: 522  DPALLTEALTHASCEYDTSTQSYQRLEFLGDAVLDMVVMAVIAAHPVEMDQGPMTLLKHS 581

Query: 1664 AVNNENFARVA----------------------VKHKLHVHL-----RHGS-------SA 1689
             VN    A                         V H+  +HL      HG        + 
Sbjct: 582  VVNANLLAFFCMELCAPDEPTHVPQFANGEINFVPHQGQIHLWRFLRSHGPNVKSAREAC 641

Query: 1690 LDRQ--IRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV-- 1745
            L+R   +RD +++ LE   +  +  F     +A K L DIVES+ GAIF+D G +  V  
Sbjct: 642  LERHHGLRDEIRDALEHGSQYPWELF--ARLRADKFLSDIVESVLGAIFIDCGGNLDVCR 699

Query: 1746 --------VWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASR--SGNLAT 1794
                    VW + + + D +       +HP R   +   + A  L +K  R  SG +AT
Sbjct: 700  AFVERIGLVWYIRRVIADGVNV-----VHP-RNTAQNMVKGAGTLVFKRKRVESGGMAT 752


>gi|301106324|ref|XP_002902245.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
 gi|262098865|gb|EEY56917.1| RNA-dependent RNA Polymerase1 (RDR1) [Phytophthora infestans T30-4]
          Length = 2680

 Score =  153 bits (386), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 242/551 (43%), Gaps = 69/551 (12%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQ+++   A  +NTI +L TG GKTL+A+     + ++++  N   L VF VP  P
Sbjct: 197 QLRRYQVELTISALLENTIVYLPTGCGKTLVAI----KVLDEMKHLNPNKLVVFFVPTGP 252

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV QQA  IR ++ + V    G+ G+                 L +T Q  LN+L +   
Sbjct: 253 LVSQQAAYIRRESDFRVKEMSGQHGRTGAATSDPITVDGDVDALAVTPQYFLNLLFNDRT 312

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           K+   ++++ DE HHA   HPY  ++ +   T     RP +  +TASP   +GV  +   
Sbjct: 313 KITDYSVMVFDEAHHATGNHPYCELLKKL-ATIDLRTRPHILALTASPFG-EGV-RETSG 369

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
              + NL    ++VV                +  +   D  AS      Q     V V+E
Sbjct: 370 QTALNNLARAFNAVV---------------NAPTIAAEDLEASFIPKEAQW----VTVQE 410

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSER--------------TESDGAANLIQK 588
           +      R           G K  +   Y +  R              T+    +  + K
Sbjct: 411 SEHERKLRE----------GIKRYIESFYTLIRRLMNGQVIPFEGNYDTDDMELSQFLAK 460

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
           LR +     ++ +      A +  T ++  +R+   L++ FQ  +L KV S      + G
Sbjct: 461 LRILREQAEKMARG---PKADTDTTGVEKSKRSLSDLELIFQ--HLLKVASSFYNLSIHG 515

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAV-------ADGK 701
           A +  +A        F +    E ++G+   + V+    +  ++I A V           
Sbjct: 516 AGTVAEAL----RRIFSDLEAAESKKGK--RAFVLVEPAYRAIMIPALVNFPLETFTGTD 569

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ +V  + + + +     + RAI+FV R   A++L K    L  L  +     +GHN+ 
Sbjct: 570 ISNRVHLVAECIRRANFDHNSRAIVFVRRRKTAILLAKAMEALDVLRELNPTRFVGHNSY 629

Query: 762 QEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
           + M   + Q  T+ +FR GR+ LLVAT+V EEGLD+ +C++VI+FD    V + IQSRGR
Sbjct: 630 EGMSWEEEQRPTLDRFRQGRIRLLVATNVLEEGLDVPECSLVIQFDGVIGVTSLIQSRGR 689

Query: 821 ARKPGSDYILM 831
           AR   S +I+ 
Sbjct: 690 ARHRDSSFIIF 700


>gi|240255863|ref|NP_680697.4| protein RNAse II-like 1 [Arabidopsis thaliana]
 gi|332658200|gb|AEE83600.1| protein RNAse II-like 1 [Arabidopsis thaliana]
          Length = 264

 Score =  152 bits (385), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 132/236 (55%), Gaps = 9/236 (3%)

Query: 1590 VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY 1649
            ++  +LE  L  KFKD+ LL++A T AS        Y+ LE +GD++L+  I       Y
Sbjct: 27   MEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLY 86

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG 1709
                PG LT LRA  V+ E  ARVAV H+L+ +LRH    L+ QI +FV    E + K  
Sbjct: 87   PKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFV----EAMEKYP 142

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVR 1769
             +S GL   K PKVL DIVES  GAIF+D    T  VW+V +PLL+P++  + +  HP+ 
Sbjct: 143  LHSNGL--LKVPKVLADIVESTIGAIFMDCNS-TETVWKVIKPLLEPIIHLDKMKSHPMT 199

Query: 1770 ELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNAL 1824
            EL E CQ++   L  K +   N  T   +I+   VG   +P KK  A+  AA+NA+
Sbjct: 200  ELNEMCQKRNLKLTSKDTWEEN-QTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254


>gi|168177328|pdb|3C4B|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
            Dicer
          Length = 265

 Score =  152 bits (385), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 138/250 (55%), Gaps = 15/250 (6%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            F   E  +  +FK++  L++A THAS   + ++  YQRLEF+GDA+LD+LITKHL+    
Sbjct: 15   FETFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPR 74

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------- 1703
               PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFVK  LE       
Sbjct: 75   QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKNEXQGX 134

Query: 1704 --ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT-- 1759
              EL +   +     D + PK  GDI ES+AGAI+ DSG    VVWQV+ P   P++   
Sbjct: 135  DSELRRSEEDEEKEEDIEVPKAXGDIFESLAGAIYXDSGXSLEVVWQVYYPXXQPLIEKF 194

Query: 1760 PETLPMHPVRELQERCQQQAEGLEYKASRSGNL-ATVEVYIDGVQVGVAQNPQKKMAQKL 1818
               +P  PVREL E   + A+    + +  G +  TVEV   G   GV ++   ++A+  
Sbjct: 195  SANVPRSPVRELLEXEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS--YRIAKSA 252

Query: 1819 AARNALAVLK 1828
            AAR AL  LK
Sbjct: 253  AARRALRSLK 262



 Score = 45.1 bits (105), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T  Y+R E LGDA L +++++ L+    Q  
Sbjct: 18   FEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDAILDYLITKHLYEDPRQHS 77

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 78   PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 109


>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
 gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
          Length = 1384

 Score =  152 bits (384), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 191/442 (43%), Gaps = 89/442 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAASC 1396
            E C I  LP ++      + +I+ ++E  L+A +L+D I   V       I+ A++    
Sbjct: 884  EACTIDRLPFTMAIFGLFISAIVEQLEIELIATRLRDTILRDVSFKSTDHIITAISTPLA 943

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
                 Y+R E LGD+ LK+ VS  LF ++P  HEG L+  R  +V N  L + AL  GL 
Sbjct: 944  HRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLD 1003

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            +YI   R A  +W+AP +                                          
Sbjct: 1004 AYIVTKRLASRKWSAPLI------------------------------------------ 1021

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
              E  G   + R +S+K LADVVEALIG  YV+GG   A   ++    ++     +    
Sbjct: 1022 -SEKLGRVPAKRQMSTKVLADVVEALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTA 1080

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDA 1635
            +R +  PES  R +    L+D +   F+D  LLVEA+TH S    S    YQRLE++GDA
Sbjct: 1081 AR-SVAPESA-RHMMNDRLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDA 1138

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------------NENFA 1671
            VLD +I   +F      P G +T ++ A VN                         ++FA
Sbjct: 1139 VLDMVIVSAIFNHRIQRPQGDMTKIKHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFA 1198

Query: 1672 RVAVKHKLHV------------HLRHGSSALDRQIRDFVKEVLEELLK-PGFNSFGLGDC 1718
              + +  + +              R  S A  R +RD   E+   LL+ P +    L   
Sbjct: 1199 VTSSQESVELWRFMRYRGQGLKAARDASLARHRALRD---EIASSLLQAPHYPWHALSRL 1255

Query: 1719 KAPKVLGDIVESIAGAIFLDSG 1740
             A K   DI+ES+ GAIF+DSG
Sbjct: 1256 NADKFFSDIIESVLGAIFVDSG 1277



 Score =  151 bits (382), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 186/729 (25%), Positives = 308/729 (42%), Gaps = 144/729 (19%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-------ND-----LQRQNK 350
           Q R YQL++LE + K+N I           +AV  + S         ND      +RQN 
Sbjct: 15  QPRNYQLEMLEASMKENII-----------VAVCSLNSYVKLQNGNDNDPLDGYRERQNA 63

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFW-DAQRWQREFDTKQVLVM 408
            + A        L  QQ EVI      V       + + + W D   W    +  +V+V 
Sbjct: 64  YVFA--------LCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVS 115

Query: 409 TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VF 464
           T  +L + L H  +KM  + LLI DE HH  ++H  + +M +FYH T  +  P+    + 
Sbjct: 116 THAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTKSGPAAVPRIM 175

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEK--HVP-------MPS 514
           G+TASPV    V S      ++  +ES LD+V  T +  R+EL K  H P        P+
Sbjct: 176 GLTASPV----VRSNHQ---ELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPT 228

Query: 515 EVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSR-----RSKWQFMGARDAGAKEELRQ 569
           +       + +L +L+   + +++  +   Q   +     R+  + +       +E+LR+
Sbjct: 229 DPAGFRSASLTLGALYHAWENLDIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRR 288

Query: 570 VYGVSERTESDGAANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVK 628
                           + + R I     ELG+W A Y +  S             QL  +
Sbjct: 289 ---------------FVDRSRHI---FEELGEWAAEYYIYASI-----------KQLRDR 319

Query: 629 FQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEH 688
            ++SY+S                               G  +E E+  L+D   +S    
Sbjct: 320 VRDSYMS-------------------------------GDWDEAEKAYLVD--FLSKIPT 346

Query: 689 VDVIIGAAVADG-KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-S 746
            D+       DG +++PK +SL+  L      E F  +IFV++ V    +  + +  P +
Sbjct: 347 SDIHFALNDPDGFRISPKFESLLNFLDSSDQRE-FSGLIFVKQRVTVSAMTSLLSVHPYT 405

Query: 747 LSFVKSASLIGHNNSQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQ 798
               + A+ +G +NS        ++   Q+Q +T+  FR GR  L++AT V EEG+D+  
Sbjct: 406 RERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGIDLSA 465

Query: 799 CNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           C+VV+ +D    + ++IQ RGRAR+  S + +M    + S         +  + L +  I
Sbjct: 466 CSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADV------SRWQDLEQAMI 519

Query: 859 E--RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSIL 916
           E  + D   L+  S L S+D         +ST AV++ + A+  +H +C+ LP   Y  +
Sbjct: 520 EAYQDDERQLQSVSALESLDEEVMERLTGDSTSAVLTADMAMAHLHHFCAVLPPQPYVDM 579

Query: 917 RPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEM 975
           RP F  E +E   G  + +  L    +    + EG     + R A +     A K L+E 
Sbjct: 580 RPVFSFETNED--GLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKSLYEF 637

Query: 976 GAFTDMLLP 984
           G   D LLP
Sbjct: 638 GLVNDHLLP 646



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 1601 IKFKDRGLLVEAITHASRP-SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
            + FK    ++ AI   S P +  ++ YQR EF+GD++L   ++  LFF + N   G L++
Sbjct: 926  VSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSE 982

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
             R   V N   A+ A+   L  ++     A  +     + E L  +  P           
Sbjct: 983  GRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRV--PAKRQM------ 1034

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTS 1744
            + KVL D+VE++ GA ++D G  T+
Sbjct: 1035 STKVLADVVEALIGAAYVDGGHSTA 1059


>gi|240276002|gb|EER39515.1| dicer-like protein [Ajellomyces capsulatus H143]
          Length = 800

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 193/442 (43%), Gaps = 80/442 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSI+  VE  LLA +L   I  PV     S ++ A++A+
Sbjct: 242  PASDCSIDKLPLEYSMFALLAPSIIHNVEIYLLAEELNKTILRPVAFTDLSLVITAISAS 301

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            + +E   Y+R E LGD+ LK+  +  L    P  HEG L+R +  +VSN  L   A+  G
Sbjct: 302  AAREATNYQRIEFLGDSILKFQTTLQLTAANPIWHEGLLSRAKDTVVSNKRLSYAAIETG 361

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W  P                               +K++ E E+  
Sbjct: 362  LDKFILLDVFTGAKWRPP------------------------------CNKDHLESEEQG 391

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            +            R +S+KTLADVVEAL+    ++GG+  A   ++    +++  P E  
Sbjct: 392  VPQ----------REMSTKTLADVVEALLAAATLDGGQRKAEKCLEIFLPELQWMPLEDR 441

Query: 1575 CPSRPACVPESVLRSVD--FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +  + VPE+   ++   F  +E  +   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 442  VNALYSSVPEAYENTLTSWFQEVESLVGYVFNKKVFLVQAFTHPSNPGSKTSSYQRLEFV 501

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF +   LP   +  +R A  N +  A + +                 
Sbjct: 502  GDAILDHIIVYHLFNAPRILPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKE 561

Query: 1676 ---------KHKLHVHLRHGSS--------ALDRQIRDFVKEVLEELLKPGFNSFG-LGD 1717
                     K  L  ++RHG+S            Q +    ++ E L K     +  L  
Sbjct: 562  NTSTKLTTRKVSLWQYMRHGTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSR 621

Query: 1718 CKAPKVLGDIVESIAGAIFLDS 1739
              A K   D++ES+ GAIF+DS
Sbjct: 622  LHAQKFFSDLIESVLGAIFIDS 643


>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
          Length = 1384

 Score =  151 bits (381), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 186/729 (25%), Positives = 308/729 (42%), Gaps = 144/729 (19%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-------ND-----LQRQNK 350
           Q R YQL++LE + K+N I           +AV  + S         ND      +RQN 
Sbjct: 15  QPRNYQLEMLEASMKENII-----------VAVCSLNSYVKLQNGNDNDPLDGYRERQNA 63

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFW-DAQRWQREFDTKQVLVM 408
            + A        L  QQ EVI      V       + + + W D   W    +  +V+V 
Sbjct: 64  YVFA--------LCIQQHEVIASNLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVS 115

Query: 409 TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPS----VF 464
           T  +L + L H  +KM  + LLI DE HH  ++H  + +M +FYH T  +  P+    + 
Sbjct: 116 THAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYHPTLTKSGPAAVPRIM 175

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEK--HVP-------MPS 514
           G+TASPV    V S      ++  +ES LD+V  T +  R+EL K  H P        P+
Sbjct: 176 GLTASPV----VRSNHQ---ELLMVESNLDAVCRTPRLHRQELLKFTHRPHLQQIWYTPT 228

Query: 515 EVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSR-----RSKWQFMGARDAGAKEELRQ 569
           +       + +L +L+   + +++  +   Q   +     R+  + +       +E+LR+
Sbjct: 229 DPAGFRSASLTLGALYHAWENLDIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQLRR 288

Query: 570 VYGVSERTESDGAANLIQKLRAINYALGELGQWCA-YKVAQSFLTALQNDERANYQLDVK 628
                           + + R I     ELG+W A Y +  S             QL  +
Sbjct: 289 ---------------FVDRSRHI---FEELGEWAAEYYIYASI-----------KQLRDR 319

Query: 629 FQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEH 688
            ++SY+S                               G  +E E+  L+D   +S    
Sbjct: 320 VRDSYMS-------------------------------GDWDEAEKAYLVD--FLSKIPT 346

Query: 689 VDVIIGAAVADG-KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-S 746
            D+       DG +++PK +SL+  L      E F  +IFV++ V    +  + +  P +
Sbjct: 347 SDIHFALNDPDGFRISPKFESLLNFLDSSDQRE-FSGLIFVKQRVTVSAMTSLLSVHPYT 405

Query: 747 LSFVKSASLIGHNNSQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQ 798
               + A+ +G +NS        ++   Q+Q +T+  FR GR  L++AT V EEG+D+  
Sbjct: 406 RERFRCAAYVGWSNSSASKDILGDLLNMQLQRDTLDDFRSGRKNLIIATDVLEEGIDLSA 465

Query: 799 CNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           C+VV+ +D    + ++IQ RGRAR+  S + +M    + S         +  + L +  I
Sbjct: 466 CSVVVCYDKPPNLKSFIQRRGRARRKQSTFAIMFPTDDTSADV------SRWQDLEQAMI 519

Query: 859 E--RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSIL 916
           E  + D   L+  S L S+D         +ST AV++ + A+  +H +C+ LP   Y  +
Sbjct: 520 EAYQDDERQLQSVSALESLDEEVMERLTGDSTSAVLTADMAMAHLHHFCAVLPPQPYVDM 579

Query: 917 RPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEM 975
           RP F  E +E   G  + +  L    +    + EG     + R A +     A K L+E 
Sbjct: 580 RPVFSFETNED--GLLKGTVILPSCVHPKVRRTEGRRWWRTERAAMKETAFQAYKSLYEF 637

Query: 976 GAFTDMLLP 984
           G   D LLP
Sbjct: 638 GLVNDHLLP 646



 Score =  149 bits (376), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 192/442 (43%), Gaps = 89/442 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAASC 1396
            E C I  LP ++      + +I+ ++E  L+A +L+D I   V       I+ A++    
Sbjct: 884  EACTIDRLPFTMAIFGLFISAIVEQLEIELIATRLRDTILRDVSFKSTDHIITAISTPLA 943

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
                 Y+R E LGD+ LK+ VS  LF ++P  HEG L+  R  +V N  L + AL  GL 
Sbjct: 944  HRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGRDMIVQNPRLAKAALDTGLD 1003

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
            +YI   R A  +W+AP +                        +KL               
Sbjct: 1004 AYIVTKRLASRKWSAPLI-----------------------SEKLER------------- 1027

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
                     + R +S+K LADVVEALIG  YV+GG   A   ++    ++     +    
Sbjct: 1028 -------VPAKRQMSTKVLADVVEALIGAAYVDGGHSTAQACIRRFLPEINLHAVDTRTA 1080

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDA 1635
            +R +  PES  R +    L+D +   F+D  LLVEA+TH S    S    YQRLE++GDA
Sbjct: 1081 AR-SVAPESA-RHMMNDRLKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDA 1138

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------------NENFA 1671
            VLD +I   +F      P G +T ++ A VN                         ++FA
Sbjct: 1139 VLDMVIVSAIFNHRIQRPQGDMTKIKHAVVNANLLAFLCMEFAISEEKLDVAQTSKDSFA 1198

Query: 1672 RVAVKHKLHV------------HLRHGSSALDRQIRDFVKEVLEELLK-PGFNSFGLGDC 1718
              + +  + +              R  S A  R +RD   E+   LL+ P +    L   
Sbjct: 1199 VTSSQESVELWRFMRYRGQGLKAARDASLARHRALRD---EIASSLLQAPHYPWHALSRL 1255

Query: 1719 KAPKVLGDIVESIAGAIFLDSG 1740
             A K   DI+ES+ GAIF+DSG
Sbjct: 1256 NADKFFSDIIESVLGAIFVDSG 1277



 Score = 57.8 bits (138), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 12/145 (8%)

Query: 1601 IKFKDRGLLVEAITHASRP-SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
            + FK    ++ AI   S P +  ++ YQR EF+GD++L   ++  LFF + N   G L++
Sbjct: 926  VSFKSTDHIITAI---STPLAHRLTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSE 982

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
             R   V N   A+ A+   L  ++     A  +     + E LE +  P           
Sbjct: 983  GRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLERV--PAKRQM------ 1034

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTS 1744
            + KVL D+VE++ GA ++D G  T+
Sbjct: 1035 STKVLADVVEALIGAAYVDGGHSTA 1059


>gi|226294068|gb|EEH49488.1| Dicer [Paracoccidioides brasiliensis Pb18]
          Length = 1423

 Score =  151 bits (381), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 213/487 (43%), Gaps = 78/487 (16%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++R   V   +NLL    EH      +GEE    +YY+   PE   I  LP  +   A
Sbjct: 869  QPVVRAELVRLRRNLLDRTTEH------KGEE---TSYYIC--PEPLRISALPAPVAVFA 917

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
               P+++ R+ES L+A++  +K+   +     LEALT  S         Q  F       
Sbjct: 918  FTFPAMISRIESYLIALEACNKLQLTIIPELALEALTKDSDNTEEHRAEQIHFQRGMGKN 977

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   S  LF       E      R  ++ N  L+  A+S G+  +++ 
Sbjct: 978  YERLEFLGDCFLKMSTSISLFAMNADDDEFDFHVKRMCLICNQNLFNTAMSLGIYEFVRT 1037

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F+   W   G+                     + + K  ++   N++           
Sbjct: 1038 QGFSRRNWYPEGI--------------------KLLQGKAKSETAENKHS---------- 1067

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGK--------DAANHLMKWIGIQVESDPEEV 1573
                    L+ K++AD+ EALIG   + GG+         A    +     QV      V
Sbjct: 1068 --------LADKSIADICEALIGASLLSGGRVHRFDTAVKAVTAFVNSENHQVSDWQSYV 1119

Query: 1574 GCPSRPAC-VPESVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRL 1629
            G  S P   + E+    +D    + D L  +FK   LL  A THAS P+  S V CYQRL
Sbjct: 1120 GLYSLPRYQIAEADDTQLDLAQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVPCYQRL 1179

Query: 1630 EFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSA 1689
            EF+GD++LD +  +HL+  Y +  P  LT+ + A V+N+    VAVK  LH HL + S A
Sbjct: 1180 EFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSKA 1239

Query: 1690 LDRQIRDFVKEVLEELLKPGFNS--FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
            L  QI  + +E+     +   +S  F       PK L D++E+  GAIF+DS     VV 
Sbjct: 1240 LLGQITRYAEEIEATETE-SIDSPDFWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVVE 1298

Query: 1748 QVFQPLL 1754
              FQ  L
Sbjct: 1299 DFFQQCL 1305



 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 159/639 (24%), Positives = 265/639 (41%), Gaps = 132/639 (20%)

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           P  YQ     + +T  ++      +  D W  + W+R F    ++V TA++L   L HS 
Sbjct: 98  PREYQLELFEKAKTTNIIAVLDTALQTDLWSKETWKRHFSKNMIIVCTAEVLYQCLLHSF 157

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQV 480
           I+ME INLLI DE HH  K HPY+ ++ +FY   T  + RP +FGMTASPV+ K     V
Sbjct: 158 IQMEQINLLIFDEAHHTKKDHPYARIVKDFYLQMTESQHRPKIFGMTASPVDAK-----V 212

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAV 540
           D    + +LE  LDS + T  +   L + V  P+E    YD             +++ A 
Sbjct: 213 DVVTAVKSLEMLLDSQIATASNLDALRQSVARPTEQEWVYD-------------RLDPAF 259

Query: 541 EEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY-ALGEL 599
           E     S      QF                         G  ++++K+   +  A   L
Sbjct: 260 ETDLYKSMHS---QF-------------------------GNISVLKKMFICSLEATSTL 291

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G+WC+                 ++   +   E  L K+         EG++S++    + 
Sbjct: 292 GRWCS-----------------DWLWTIVLDEPSLPKL---------EGSISRR---YIR 322

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAV-----ADGKVTPKVQSLIKILL 714
           + +G    G +E+         + S  E V VI              ++PKV+ L   L 
Sbjct: 323 TSSGNHTKGVDEM---------IKSLREAVKVIKDHTFYTPVDCPEHLSPKVRLLHHQLS 373

Query: 715 KY--QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ---EMRTFQM 769
           KY  +HT D + ++FVE+  +A +L ++F+ L     +++  LIG    +   E  +F+ 
Sbjct: 374 KYFERHT-DTKCVVFVEKRHSARLLGELFS-LIGTRHMRTGVLIGVRTDEAGGEKVSFRQ 431

Query: 770 Q-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
           Q  T+ KFR G +  LV   +A   + +   N    +D+                    Y
Sbjct: 432 QFWTLLKFRKGELNCLVCFMIAPPKIFVPLFN----YDM-------------------QY 468

Query: 829 ILMIERGNLSHATFLRNARNSEETLRK--EAI--ERTDLSHLKDTSRLISVDAVPGTVYQ 884
             M+ER NL H   L  A+ +E  +R+  E++  +R       +  + +  +    T + 
Sbjct: 469 AHMMERDNLIHQRCLDEAQEAENIMRQFCESLPEDRIIRGASDELDKFLYKERCRKT-FT 527

Query: 885 VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNA 944
           V STG+ ++ NSA+ ++  Y S L  +     R  + +  H   G    + C++ LP  +
Sbjct: 528 VPSTGSKLTYNSALAVLAHYASSLQYENEMSTRANYFI--HRIRGA---FVCEVVLPEKS 582

Query: 945 PFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
           P   L G    +   A+Q+     C  L + G   D  L
Sbjct: 583 PVRGLTGRPAVAKLSAKQSAAFETCLMLRKNGLLDDYFL 621


>gi|357462179|ref|XP_003601371.1| Ribonuclease 3-like protein [Medicago truncatula]
 gi|355490419|gb|AES71622.1| Ribonuclease 3-like protein [Medicago truncatula]
          Length = 322

 Score =  150 bits (380), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 7/237 (2%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
             + +E+ L  +FK++ LL EA+TH +  +   + Y+RLE+VGDAVL+ L+ +  F SY N
Sbjct: 69   LYEVEEILGYEFKNKQLLEEALTHTTYGAE--NDYERLEYVGDAVLNLLMAREQFVSYPN 126

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
            L PG LT LR+  V++E  ARVA+ H L  +LRH    L  Q+   +     E       
Sbjct: 127  LKPGILTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQVSLGIGIGQIEAFTKAIE 186

Query: 1712 SFGL---GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPV 1768
             + +   G    PK L D+VES  GA+F+D      +VW+VF+ LL+P++ P T+  HPV
Sbjct: 187  DYPIHSNGHIHVPKDLADMVESTIGALFIDCDSSLEIVWKVFRKLLEPIIEPNTVEKHPV 246

Query: 1769 RELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKK-MAQKLAARNAL 1824
             ELQE CQ++   L++      ++  ++V+I+   VG      KK +A   AA+NAL
Sbjct: 247  SELQEVCQKKKLNLQFVDLWEKSM-NIDVFINEKFVGRGTYGSKKDIAHYRAAKNAL 302



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EALT  +      YER E +GDA L  +++R  F+ YP    G LT++R + V +  L +
Sbjct: 88   EALTHTTYGAENDYERLEYVGDAVLNLLMAREQFVSYPNLKPGILTQLRSKNVDSEKLAR 147

Query: 1449 YALSKGLQSYIQ 1460
             A++ GL  Y++
Sbjct: 148  VAINHGLDRYLR 159


>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
          Length = 1386

 Score =  150 bits (380), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 207/457 (45%), Gaps = 61/457 (13%)

Query: 1317 HSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD 1376
            H+     + +  L + +   LP +LC    +P +L +    LPS+ R V   L A  L +
Sbjct: 855  HASNNLLKSKTTLAQPHRTLLPLKLCTGTHIPRTLWKVFSYLPSLTRLVHDSLQATALFE 914

Query: 1377 KINYPVPASKI-LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTR 1435
            ++N+P  +  + ++ALT       + Y+  E +GD +LK   S  ++L + +K EG ++ 
Sbjct: 915  QLNFPTISLLLGMQALTPPGVGVPWDYQTLETVGDTFLKLATSVHVYLSHLKKGEGDMSH 974

Query: 1436 MRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKS 1495
            +R + V N  L + A+   L S+I + RF   R                           
Sbjct: 975  VRSKSVDNAYLRRKAVQANLPSFILSQRFRTDR--------------------------- 1007

Query: 1496 VAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD-- 1553
                          + D   EDG+   + S  R +  + L+DVVEAL+G  ++ GG +  
Sbjct: 1008 --------------FRDAQTEDGKELANGSFSRTIPRRVLSDVVEALLGAGFLTGGIELG 1053

Query: 1554 --AANHLMKWIGIQVESDPEEVGCPSRPACV----PESVLRSVDFHALEDALKIKFKDRG 1607
                  L    G  V  +   +      A +    P  +L+      L+  +   FK++ 
Sbjct: 1054 LKVGTALDLCFGGTVPWNQRTLNLSFESAALSRLDPSILLKC---ETLQQKIGYVFKEQL 1110

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            LLV+A+TH S  S   +CY+R E++GDAV+D  I +H F  + N     LT  RA  V+N
Sbjct: 1111 LLVQALTHRSANSFMTNCYEREEWLGDAVIDMWIVEHAFKRFANATAEELTLARARVVSN 1170

Query: 1668 ENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKAP 1721
             +   +A+K   L   + H S   D+  R+ ++ +     +EE      N F + D   P
Sbjct: 1171 GSLGFLAIKKLGLQEIIMHKSENFDQACREAIEAIEPFTKIEEFFSKMDNLFVVFD--PP 1228

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            K+L D++E+I G++F+DSG D   V++    + + ++
Sbjct: 1229 KILNDVLEAIVGSVFIDSGFDLQTVYRTLDIIFEDVI 1265



 Score =  133 bits (335), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 50/374 (13%)

Query: 667  GGTNEIEEGELLD-SH-------VVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQH 718
            G T ++  G LLD SH       +    E VD+     + + +++ KV +L KIL+ Y+ 
Sbjct: 285  GSTKQLMSGRLLDPSHQERIQGLIKQLDETVDI---DDIPEDQLSAKVIALNKILVNYKE 341

Query: 719  TED---FRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE-------MRTF 767
             +D   F  I+FVER   A +LP +      L  F++ A+L GH    E       M + 
Sbjct: 342  KDDHGNFLCIVFVERRQHAQLLPILLERNTQLKDFLRPAALTGHGGHNENDIIGIKMDSR 401

Query: 768  QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
              ++T+AKFR G   L +ATSVAEEGLD R C VVIRFDL  T   YIQSRGRAR   S+
Sbjct: 402  TQKKTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARDSE 461

Query: 828  YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQV-E 886
            YI+M+  G  S + +L  +   E+ L+    +R +   + +      V++ P  + ++ +
Sbjct: 462  YIVMLPAG--SSSKYLAFS-GEEDNLKAALYDRPENELIGEG----EVESTPQLICRLPD 514

Query: 887  STGAVVSLNSAVGLIHFYCSQLPSDRY-SILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
               ++++ ++A  L++  C  +P D +  I+ PE+     E       + C++ LP  A 
Sbjct: 515  GKDSILTYSAATSLLNDVCQLIPPDEFLPIVAPEY-----EMTCLGDNFICQVTLPPMAA 569

Query: 946  FE----KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEG 1001
             +      +G   ++ + A+++    AC+ L E G   +  LP +          ++  G
Sbjct: 570  LDPSQRTFKGLEMTTKKEAKRSAAFEACRVLRERGVLNEHFLPQR----------EDKTG 619

Query: 1002 EPLPGTARHREFYP 1015
            +P     R  E  P
Sbjct: 620  KPCDADGRELETAP 633



 Score =  120 bits (302), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 28/244 (11%)

Query: 292 KSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR-SICNDLQRQNK 350
           ++ +  K+P    R YQ ++LE+AKK+N I   +TG GKTL+A+ LI  +        + 
Sbjct: 13  QNSSSSKIP----RLYQAELLEEAKKRNIIIRADTGTGKTLVALNLIAWTAAQPKSNPDD 68

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTA 410
            ++  FLVP  PLV+QQAE I+ Q+   V  Y G++  + W+  +WQ E +   VLV TA
Sbjct: 69  HLIQAFLVPTRPLVHQQAEYIQSQSILRVKAYTGDLQPELWNIDKWQSELNEVDVLVSTA 128

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK---EKRPSVFGMT 467
           Q               ++LLI DE HH  K H Y+ +M   YH  +K    + P + G+T
Sbjct: 129 Q---------------VSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKNPTNRLPKILGLT 173

Query: 468 ASPV-NLKGVSSQVDCAIKICNLESKLDSVVCTIKDR-KELEKHVPMPSEVVVEYDKAAS 525
           ASP+ N K +    D    I +L+S L + +  +K    ++ +H   P+E+ + ++ +  
Sbjct: 174 ASPIWNYKDLDKAED---DIRSLQSSLAAQIYEVKRHIDDVSQHNFKPTELAIYFEPSPD 230

Query: 526 LWSL 529
              L
Sbjct: 231 FVKL 234


>gi|125586950|gb|EAZ27614.1| hypothetical protein OsJ_11558 [Oryza sativa Japonica Group]
          Length = 258

 Score =  150 bits (379), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 11/215 (5%)

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHG 1686
             RLEF+GDA+LDHL T++ +  Y +  P  LTDLR+A+VNN  +A  AVK  L+ H+ H 
Sbjct: 45   MRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHS 104

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFN-SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
            SS L R++  +++E  +    P +    G+G    PKVLGD++ESIAGAI+LDS  D  V
Sbjct: 105  SSELHRKMSYYLEEFGQSFTGPSYGWEAGIG---LPKVLGDVIESIAGAIYLDSKCDKEV 161

Query: 1746 VWQVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATV-------EVY 1798
            VW+  + LL+P+ TPET+   PV+ LQE C +++  + Y+ +    +++V       E  
Sbjct: 162  VWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETT 221

Query: 1799 IDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETA 1833
                + G  +   KK+A K   ++ +A  K+ E A
Sbjct: 222  YSATKSGPCKLVAKKLASKAVLKDLIAGHKDTEAA 256


>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
          Length = 1461

 Score =  150 bits (379), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 123/221 (55%), Gaps = 17/221 (7%)

Query: 289 VGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDL--- 345
           V K SEA   +  EQAR YQ+++ E AKK NTI  L TG GKT I+VLL++   +++   
Sbjct: 14  VEKNSEA---LLAEQARSYQIELFEFAKKHNTIVCLGTGTGKTFISVLLVKHFEHEVAGP 70

Query: 346 -------QRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQR 398
                  +   K+   VFL P VPLV QQ+ V+ +     V  Y G M  D W ++ W R
Sbjct: 71  WIEGSYGEPIGKR--TVFLAPSVPLVEQQSAVLAQHMTVKVASYVGSMDTDRWSSENWNR 128

Query: 399 EFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE 458
           EF+   VLVMT ++    + H  + ME INLL+LDECH A    PY  +M  + +   K 
Sbjct: 129 EFNENGVLVMTPEVCRIAIDHGFLPMENINLLVLDECHRATGDDPYVKIMENYANLGDKS 188

Query: 459 KRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCT 499
           +RP + G+TAS VN K    +V    KI +LE+ LDSV  T
Sbjct: 189 RRPRILGLTASVVNAKVQGFEVQ--KKIRDLEACLDSVAKT 227



 Score =  120 bits (300), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 31/305 (10%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFV-ERVVAALV---LPKVFAELPSLSFVKSASLIG 757
           V P++  L++++ +++ T +  A++FV ER+VA ++   + ++  E  S +F++ + ++G
Sbjct: 344 VPPRMTRLLEVIRRFEKT-NLSAVVFVKERLVAYVLYNWMRQLSVEDSSFAFIRCSFIVG 402

Query: 758 HNN----------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
                        S +M +    + +  FR+G   L+ ATSV EEG+D+  CN++IRFD 
Sbjct: 403 QAQINYAREIDPESLKMNSKAQNKVMKNFRNGEYNLMFATSVIEEGMDVPACNLIIRFDP 462

Query: 808 AKTVLAYIQSRGRAR-KPGSDYILMIERGNLSHATFLRNARNSEETLRKEA-IERTDLSH 865
              V +Y QS+GRAR KP    +L  E   L     L + + +E+ + K    ER   + 
Sbjct: 463 PMDVRSYTQSKGRARAKPSLYVVLSSESDRLMTEALLDSYQETEQLVMKCCGTERIAPTA 522

Query: 866 LKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERH 925
            +   + +    +P  VY      A ++  SA+ +I+ YC +    +Y  L P F ME  
Sbjct: 523 FETAEKFVDDPDLPPYVY----GRARITAKSAISIIYGYCQRFMRLKYPNLFPFFDME-- 576

Query: 926 EKPGGPTEYSCKLQLPCNAPF-EKLEG---PVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
           E P G   + C L +P   P  EK+     P  S  + A+  V L  CK+LH+ G   D 
Sbjct: 577 ETPDG---FVCTLSMPIVCPVKEKISNRARPFPSKDK-AKSYVALEMCKRLHQCGELADN 632

Query: 982 LLPDK 986
           LLP +
Sbjct: 633 LLPRR 637



 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 168/364 (46%), Gaps = 54/364 (14%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK-YPQKHEGQLTRMRQQ 1439
            P P   +++ALT   C+E F  ER ELLGD++L+ +VS F  +  YP K   +L  +RQ 
Sbjct: 1084 PSPCD-LMKALTTRGCEEIFDLERLELLGDSFLQ-IVSTFAVMDWYPDKSISELNVLRQY 1141

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQE------ 1493
             V+N  L   A  KGL   ++A  F     A+   LP F   T   +  L  +E      
Sbjct: 1142 EVNNSHLLYRAHEKGLTQVLEAQPFR----ASYNFLP-FGHRTAPFEQKLLQREFLCCLV 1196

Query: 1494 --------------------KSVAED-----KLGTDKNYNEYEDDDMEDGE-----LEGD 1523
                                K++ E      + G +K  N Y D+ + D E      E  
Sbjct: 1197 KHWGFEAVSSVPRLKDLRFCKNIQEALNHFAESGEEK-INAYVDEKIYDSEDLPKRHEIP 1255

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-------DPEEVGCP 1576
              S+    +K   DVVEA+ GVY  + G   A    KWIG            D  ++   
Sbjct: 1256 VRSFHDFKAKIGGDVVEAMAGVYLEKCGPVGALRFFKWIGKDFGDTETNNFLDAFKLDFS 1315

Query: 1577 SRPACVPESVLR-SVDFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGD 1634
            +     PE + + S     +E  +  KFK RGL ++AITH S R         +L FVG+
Sbjct: 1316 AAQKVPPEQMRQYSHLIDKVERQVGYKFKSRGLALQAITHHSCREHLLTDDMDKLAFVGE 1375

Query: 1635 AVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQI 1694
            AV+D+L+T +++   T+L PG+LTDLR+A +N +  A   V+ +LH  L H S+ L   I
Sbjct: 1376 AVIDYLLTLYIYGLSTSLNPGQLTDLRSALINKQVTAYAVVRAELHTVLLHTSNKLFSAI 1435

Query: 1695 RDFV 1698
            + ++
Sbjct: 1436 KKYL 1439


>gi|344271077|ref|XP_003407368.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Loxodonta
           africana]
          Length = 926

 Score =  150 bits (378), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 250/560 (44%), Gaps = 79/560 (14%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   A+  KNTI    TG GKT +++L    IC + L++  Q +K   VF  
Sbjct: 243 KPRNYQLELALPAQNGKNTIICAPTGCGKTFVSIL----ICEHHLKKFPQGQKGKIVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQ  V     E+ GY V    G   ++    Q      +   ++V+T QIL+N
Sbjct: 299 VQIPVYEQQKSVFSKYFERLGYTVAGISGATSEEVPVRQI----VENNDIIVLTPQILVN 354

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L+  II  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V
Sbjct: 355 NLKDGIIPSLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVV--VEYDKAASLW 527
            +       D  + IC L + LD SV+ T+KD  KELE+ V  P +    VE        
Sbjct: 414 GVGDAKDITDAKMYICKLCAALDTSVIATVKDNLKELEEIVNKPQKFFRKVETRTTNKFK 473

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
            +   + Q+ V +E+ A+S                  EEL  +  +  R           
Sbjct: 474 CI---ISQLMVEIEKMAES----------------VFEELESLSHIQNR----------- 503

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV- 646
                 Y   +  QW         + A+Q      +Q+  K +ES + K + L    L  
Sbjct: 504 -----EYGTQKYEQW---------IIAVQKACMV-FQMPDKNEESRICKALFLYTSHLRK 548

Query: 647 --EGAVSKKDAKVVDSENGFVEGGTNEIEEG--ELLDSHVVSGGEHVDVIIGAAVADGKV 702
             +  +  +DA++ D+ +   +  TN    G  E+         E +  +   ++     
Sbjct: 549 YNDALMINEDARIKDALDFLKDFFTNVRAAGFDEIEQDLTQRFEEKLQELEYVSMDPNNE 608

Query: 703 TPKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI--GHN 759
            PK+Q L  IL +  H   D R I+FV+       L K   E P LSF+K   L   G  
Sbjct: 609 NPKLQDLSFILQEEYHVNPDSRTILFVKTRALVDALKKWIEENPKLSFLKPGILTGRGRT 668

Query: 760 NSQEMRTFQMQETIA-KFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           N +   T   Q+ +   FR +    +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+
Sbjct: 669 NQKIGMTLPAQKCVLDTFRSNSDSKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQT 728

Query: 818 RGRARKPGSDYILMIERGNL 837
           RGR R  GS   L+  + ++
Sbjct: 729 RGRGRARGSKCFLVTSKADV 748


>gi|315258243|gb|ADT91700.1| dicer-like protein 2 [Nicotiana attenuata]
          Length = 239

 Score =  150 bits (378), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 36/263 (13%)

Query: 1437 RQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSV 1496
            + +++SN  L +   ++ +  +I+++ F    W  PG          +     FD+E  +
Sbjct: 3    KNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPG---------DNSQVQNFDEELLM 53

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
               K+                      S   + + SK +ADVVEALIG +   GG+ AA 
Sbjct: 54   PSVKMY---------------------SRGRQKIKSKRVADVVEALIGAFLSSGGEVAAL 92

Query: 1557 HLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHA 1616
              MKW+G+ ++     V  P+ P   P +  + V+   LE  L  KF D  LLVEA+TH 
Sbjct: 93   SFMKWLGVDIDF----VDAPT-PRHFPMNAEKLVNVRYLESLLDYKFHDPSLLVEALTHG 147

Query: 1617 SRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV 1675
            S     +  CYQRLEF+GDAVLD+ +T HL+F Y  L PG +TDLR+A+VNNE +A+ AV
Sbjct: 148  SYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAV 207

Query: 1676 KHKLHVHLRHGSSALDRQIRDFV 1698
            K  LH H+ H S  L RQI + V
Sbjct: 208  KAGLHKHILHASQDLQRQIVNTV 230



 Score = 53.1 bits (126), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 13/139 (9%)

Query: 1325 GEEILDKTYYVFLPPELCFIH-PLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP 1383
            G E+   ++  +L  ++ F+  P P      A++L ++ R +ES+L       K + P  
Sbjct: 86   GGEVAALSFMKWLGVDIDFVDAPTPRHFPMNAEKLVNV-RYLESLL-----DYKFHDP-- 137

Query: 1384 ASKILEALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
             S ++EALT  S    +   CY+R E LGDA L + V+  L+ KYP    G +T +R   
Sbjct: 138  -SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSAS 196

Query: 1441 VSNLVLYQYALSKGLQSYI 1459
            V+N    Q A+  GL  +I
Sbjct: 197  VNNECYAQAAVKAGLHKHI 215


>gi|154282055|ref|XP_001541840.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412019|gb|EDN07407.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1437

 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 189/442 (42%), Gaps = 80/442 (18%)

Query: 1338 PPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTAA 1394
            P   C I  LP      A   PSI+  VE  L+A +L   I  P+     S ++ A++A+
Sbjct: 878  PASDCSIDKLPLEYSMFALLAPSIIHNVEIYLIAEELNKTILRPIAFTDLSLVITAISAS 937

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
              +E   Y+R E LGD+ LK+  +  L       HEG L+R +  +VSN  L   A+  G
Sbjct: 938  VAREATNYQRIEFLGDSILKFQTTLQLTATNLIWHEGLLSRAKDTVVSNKRLSYAAIEAG 997

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  +I  D F  ++W  P                                     Y  D 
Sbjct: 998  LDKFILLDVFTGAKWRPP-------------------------------------YNKDH 1020

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVG 1574
            +E  E      + R +S+KTLADVVEAL+    ++GG+  A   ++    +++  P E  
Sbjct: 1021 LESEE---QGVAQREMSTKTLADVVEALLAAATLDGGQRKAEKCLEIFLPEIQWMPLEDR 1077

Query: 1575 CPSRPACVPESVLRSVD--FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFV 1632
              +  + VPE+   ++   F  +E  +   F  +  LV+A TH S P S  S YQRLEFV
Sbjct: 1078 VNALYSSVPEAYENTLTSWFQEVESLVGYVFNKKVFLVQAFTHPSNPGSKTSSYQRLEFV 1137

Query: 1633 GDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV----------------- 1675
            GDA+LDH+I  HLF +   LP   +  +R A  N +  A + +                 
Sbjct: 1138 GDAILDHIIVHHLFNAPRALPHFDMHLMRTALANADFLAFLCIGMSTERVRGEIAECSKE 1197

Query: 1676 ---------KHKLHVHLRHGSS--------ALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
                     K  L  ++RHG+S            Q +    ++ E L K     + L   
Sbjct: 1198 NTSTKLTTRKVSLWQYMRHGTSWELTAAQQQTANQYQTLQADISEALEKSHTYPWTLLSR 1257

Query: 1719 KAP-KVLGDIVESIAGAIFLDS 1739
              P K   D++ES+ GAIF+DS
Sbjct: 1258 FHPQKFFSDLIESVLGAIFIDS 1279



 Score =  134 bits (338), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 167/710 (23%), Positives = 312/710 (43%), Gaps = 135/710 (19%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQL++LE + ++N I  ++TG+GKT +A+L IR   ++L+         FL P V 
Sbjct: 46  KPRAYQLEMLEASLRENIIIAMDTGSGKTQVAILRIR---HELETCAAHKFVWFLTPTVA 102

Query: 363 LVYQQAEVIREQ-TGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHS 420
           L  QQ + I +Q + Y      G    ++W  ++ W       +++V T Q+LL+ + H 
Sbjct: 103 LAEQQHKNISQQLSAYETRLLLGSDNVNYWSTKKIWDDILLNIRIVVSTPQVLLDAMTHG 162

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + M  I L                LV  E              GM  S     G     
Sbjct: 163 FVTMPQIAL----------------LVFDE--------------GMFPS----HGCYMYC 188

Query: 481 DCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASLWS-----LHEQLK 534
             A  I  +E  L++   T +  R+EL ++V  P    V + +  SL S     L+E L+
Sbjct: 189 TSANWISAIEDNLNARCETPRIHREELMRYVHRPELCTVNFQEDYSLGSDILRSLYEILQ 248

Query: 535 QMEVA----VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
            +++     ++   Q   +RS+   + A       E R+ + +++ ++      L+++  
Sbjct: 249 AVDMEQDPWIKNLRQQKDQRSQKNLLNAL------EKRKTFCMAQMSK------LLRQAV 296

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
           +I+    +LGQW A                          ++++S+V+  L     E   
Sbjct: 297 SIH---EDLGQWAA--------------------------DAFISEVLKRL-----ETKR 322

Query: 651 SKKDAKVVDS----ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
           +++   ++D+    E  FV    +++         +  G ++ D          +V+ K 
Sbjct: 323 ARQPTDILDTLERKEANFVFETLSQLP--------IQPGKQYWDS------EPDRVSGKA 368

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSASLIGHN 759
             LI  LL+ ++T DF  I+F ++     +L  + +  P L       +F+  +   G  
Sbjct: 369 NLLID-LLEREYTSDFTGIVFAQQRSTVTMLAHLISRHPRLKHKFVSGAFLGDSGYAGRT 427

Query: 760 NSQ-EMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           ++  E+   + Q+ +I   R G+  LL+ATSV EEG+D+  C++V+ FD    + ++IQ 
Sbjct: 428 STIIELHDLKTQKGSIDDLRSGKKNLLIATSVLEEGIDVSACHLVVCFDTISNLRSFIQR 487

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDA 877
           RGRARK  S +++ +   + S         +  +++ +E     D+  L+D     +V+ 
Sbjct: 488 RGRARKERSKFVMFLNGDDNSQGKKWTKMEDVMKSMYEE-----DMRRLEDVWAKENVEE 542

Query: 878 VPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCK 937
                 ++ESTGA+++  +A   +  +C+ L  + ++  RP F+   +E  G  T    K
Sbjct: 543 ESDEDRRIESTGALLTFENARPHLEHFCATLQCE-FTDTRPVFMFRENELGGMVT---AK 598

Query: 938 LQLP--CNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           + LP   +  F  ++G     + +LAQ+     A  KL++ G   D LLP
Sbjct: 599 VLLPNVLDPKFRVIKGSKWWRTEKLAQRDAAFQAYLKLYQEGLVNDHLLP 648


>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
 gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
          Length = 2074

 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 224/515 (43%), Gaps = 97/515 (18%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +P   +  ALTA    E   Y+R E LGD  LK++    +F +YP  HEG LT+ +   V
Sbjct: 1488 IPLDVLTVALTAPVAGERHNYQRLETLGDTVLKFLAGIQIFAEYPMWHEGYLTKRKDHAV 1547

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRW-------AAPG------VLPVFDEDTKD---- 1484
            +N+ L +  + +G+  +I  DR    +W       A P       V P+ D   +D    
Sbjct: 1548 ANVRLAKECVKRGVVRWIIRDRLLGKKWKPRYITKADPSRGEPMDVDPIPDVVKRDKPKD 1607

Query: 1485 -GDSSLFDQEKSVAEDKLGTDK----NYNEYEDDDME----DGELEGD-------SSSYR 1528
             G   +  +E SV++ ++  DK    N     DDD +    + +++G+         + +
Sbjct: 1608 TGAKEIGAKETSVSDAEMKVDKGEESNAEAKIDDDGKGLKAETKVQGEKKKKKKNKQANK 1667

Query: 1529 VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLR 1588
             LS+K LADV+E+LIG  Y+ GG        K+  + ++  P     P+R   +   V  
Sbjct: 1668 QLSTKVLADVIESLIGAAYISGGFPLGYECAKFFDLGLKWAP----LPTRVDQILSRVQP 1723

Query: 1589 SVDFHA------LEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLI 1641
              D         +E  L   FK + LL+EA+THAS R       Y+R+EF+GD++LD ++
Sbjct: 1724 EDDIPIPPQLADVEHMLGYTFKRKILLIEALTHASYREHINTISYERMEFIGDSILDMVV 1783

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV-------------------------- 1675
            T  L+ +     PG +   R+A VN    A + +                          
Sbjct: 1784 TDMLYRAPREYSPGHIHLRRSAVVNGHFLAYICLGMWRELEGVMPQPSASSNAGKDDWNP 1843

Query: 1676 ------------KHKLHVH--LRHGSSALDRQIRDFV------KEVLEELLKPG--FNSF 1713
                         H++H+   L H S  +   +R+ V      +E + + L+ G  F   
Sbjct: 1844 YLNPPTFEEGTTAHRIHLSQCLLHSSQQVLDDLRNTVERYELRREEIADALEHGSIFPWS 1903

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPV 1768
             L   +APK L DIVES  GA F+DSG    VV  + +     P+L+ ++  +   +HPV
Sbjct: 1904 SLTRLQAPKFLSDIVESTIGAAFIDSGFSIPVVTSIIRRIGILPVLERIIRDDVDVLHPV 1963

Query: 1769 RELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ 1803
              L     Q    +EYK  +        V +DGV+
Sbjct: 1964 SRLSMWAAQNERKVEYKYEKKRGDVACTVVVDGVE 1998



 Score =  144 bits (363), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 129/221 (58%), Gaps = 21/221 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++L+++ ++N I  L+TG+GKT IAVL I+   ++L+R+N+K +  FL P V L 
Sbjct: 36  RAYQQEMLDESLRRNIIIALDTGSGKTHIAVLRIK---HELERENRK-ICWFLAPTVALC 91

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            QQ  VI+      VG   G    D W +A  W+   +T +V+V T Q+ L+ LRH  I 
Sbjct: 92  QQQQSVIKTYIPGPVGLISGAHQPDQWKNAALWKSVLETHRVIVSTPQVFLDALRHGYIN 151

Query: 424 ME-AINLLILDECHHAVKKHPYSLVMSEFY---------HTTSKEKRPSVFGMTASPVNL 473
           M   I LL+ DE HHA  KHPY+L+M +FY         H      RP V G+TASP+  
Sbjct: 152 MGLQIGLLVFDEAHHAADKHPYNLIMKDFYFKLPARSPMHDADFPCRPMVLGLTASPIFG 211

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMP 513
            G    V+ A ++  +E+ LD+++CT + +RKEL +HV  P
Sbjct: 212 SG---DVNKAFRL--IEAHLDAMICTPRYNRKELAQHVHRP 247



 Score = 86.7 bits (213), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 143/341 (41%), Gaps = 68/341 (19%)

Query: 703 TPKVQSLIKILLKYQH-----TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
           T KV+ L++ LL+ +       E F  I+FV+R  A L L ++    P   F K +  +G
Sbjct: 399 TDKVRVLVECLLEEKEEVEGLNESFSGIVFVQRRDAVLALAELLKHHP---FTKDSFTVG 455

Query: 758 ---------HNNS----QEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVI 803
                    H +S        T Q Q+ T++ FR G   L++ATSVAEEGLDI  C  VI
Sbjct: 456 VLLGTSDSAHRHSLMDVTRHITKQSQDSTLSSFRLGIHNLILATSVAEEGLDIPACGSVI 515

Query: 804 RFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDL 863
           R+D    + ++IQSRGRAR+  S + LM +         +   R  EE +  E   R   
Sbjct: 516 RWDPPPNMASWIQSRGRARRKRSTFTLMYDVEEDRAQANVAKWREVEERM-VEMYSRNSG 574

Query: 864 SHLKDTSRLISVDAVPG-------TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDR---- 912
               D    + V+   G        V  VESTGA ++ +SAV  +  +C+ +        
Sbjct: 575 GREGDAG--VDVEDWEGEEPDDFDAVLSVESTGAYLTPHSAVSHLAHFCAVISRSGSNEN 632

Query: 913 ---YSILRPEFI----------------------MERHEKPGGPTEYSCKLQLPCNAPFE 947
              Y I  P+++                         H+   GP  ++  + LP + P  
Sbjct: 633 RPIYDIDPPDYVPGLHLTAPSAAGSQSTGFASSMAHAHQPYAGP--WTSTVTLPRSLPLP 690

Query: 948 K----LEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                   P  + +   + A  LA    LHE+G   + LLP
Sbjct: 691 TRSFTTAKPYATKLAAHRHAAFLA-YSYLHEVGLLNEHLLP 730



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 38/222 (17%)

Query: 1364 RVESMLLAIQLKDKINYPVPAS--------------KIL--EALTAASCQE---TFCYER 1404
            RV+ +L  +Q +D I  P+P                KIL  EALT AS +E   T  YER
Sbjct: 1713 RVDQILSRVQPEDDI--PIPPQLADVEHMLGYTFKRKILLIEALTHASYREHINTISYER 1770

Query: 1405 AELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRF 1464
             E +GD+ L  VV+  L+ + P+++      +R+  V N     Y +  G+   ++    
Sbjct: 1771 MEFIGDSILDMVVTDMLY-RAPREYSPGHIHLRRSAVVNGHFLAY-ICLGMWRELEGVMP 1828

Query: 1465 APSR--------WAAPGVLPVFDEDTKDG----DSSLFDQEKSVAEDKLGTDKNYN---E 1509
             PS         W      P F+E T          L    + V +D   T + Y    E
Sbjct: 1829 QPSASSNAGKDDWNPYLNPPTFEEGTTAHRIHLSQCLLHSSQQVLDDLRNTVERYELRRE 1888

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
               D +E G +   SS  R+ + K L+D+VE+ IG  +++ G
Sbjct: 1889 EIADALEHGSIFPWSSLTRLQAPKFLSDIVESTIGAAFIDSG 1930


>gi|328773741|gb|EGF83778.1| hypothetical protein BATDEDRAFT_85615 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1746

 Score =  149 bits (376), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 223/544 (40%), Gaps = 81/544 (14%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKIN-YP--VPASKILEALTA 1393
            L P+   + P+   L   A  LPSI+  + +  LA +   K   YP  +P S ++ A T 
Sbjct: 1247 LVPDAFRVSPISAKLTMVAHYLPSILYSLHTACLAAEFDQKYGLYPKQIPLSTLMSAFTT 1306

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             +      YER E LGD  LK+ V+ +L   Y     GQL+ +   +VSN  L++ A   
Sbjct: 1307 PAANSITNYERLETLGDKVLKFGVAHYLHSSYQSYEVGQLSTILSGLVSNKNLFEIAQQH 1366

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
             L   +    F  + W  P              S  F+    VA                
Sbjct: 1367 SLTGMLNTAPFQSNSWTPP--------------SFCFETRIFVAPTA------------- 1399

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
                     D    RV   K  +D +EAL+G Y++E G +AA HLM+   +  E  P   
Sbjct: 1400 -------SVDCLDNRVFCGKKQSDFIEALLGAYFLECGVEAALHLMRTFRLINEIPPHCF 1452

Query: 1572 -----------EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS 1620
                       ++     P     S L       ++  L   F +  LL+ A+     P 
Sbjct: 1453 RHGDTNKLHDHQISSMQNPIL---SRLDQETVDHVQQKLSYNFHNPELLLIALM---TPF 1506

Query: 1621 SGV-SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL 1679
              V S ++RLEF+GDA++D L+ ++ +  Y +  P  L+ +  A V    F ++ V  KL
Sbjct: 1507 YFVKSKFERLEFLGDAIMDILVARYFYRHYKHADPCSLSKMIQATVCKPAFCKILVSLKL 1566

Query: 1680 HVHLRHGSSALDRQIRDFVKEVLEELLKPGF-------NSFGLGD--CKAPKVLGDIVES 1730
            H HL   S     Q+    KE +  +L   +       ++F   D     PKVL D+ E 
Sbjct: 1567 HEHLLQSS-----QLSQHSKEAI--VLYANYIQNSHSQHAFKQADKAIDGPKVLCDVFEV 1619

Query: 1731 IAGAIFLDSG----RDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQQ---AEGLE 1783
            I  AIF+D+G    R   V++      +   +  ET+   P+R+L    Q Q   +E LE
Sbjct: 1620 IVAAIFIDTGYNLERTRLVIFPYVHSFIQSNINLETITEPPIRQLFAFVQSQGFSSEKLE 1679

Query: 1784 YK-ASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDEN 1842
                S +       V   G  +  +Q    K+A++ A+  AL VLK  + A  K+  + N
Sbjct: 1680 LSDESNADGFHKASVVFYGTVLATSQATTLKLAKQHASIKALNVLKHTKKATLKDMVNLN 1739

Query: 1843 GKKR 1846
              K+
Sbjct: 1740 SCKQ 1743



 Score =  118 bits (295), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 138/605 (22%), Positives = 251/605 (41%), Gaps = 92/605 (15%)

Query: 299 MPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDL------------- 345
           M EE  +PYQ+ V E+A   N IAF+++   KTL++++LI +I   L             
Sbjct: 1   MLEENIKPYQIRVYEEAIHHNVIAFMDSNDYKTLVSIMLIDAITEKLPLVHVQPSQQTYS 60

Query: 346 -----------QRQNKKML----AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDF 390
                        QN + L     +  V     V ++A  I + T  VV  Y GE     
Sbjct: 61  TSENNLAVSTYHIQNSETLNSRKTIVCVGTKGAVKEKANEIHQYTDLVVRGYSGEESSSI 120

Query: 391 --WDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM-EAINLLILDECHHAVKKHPYSLV 447
              D   WQ+EF   QVLVM  Q+ +N+L    + + + I L+I DECHH+     +  +
Sbjct: 121 SHLDYNHWQKEFSNSQVLVMPQQLFVNLLTRKYLDLSKHICLIIFDECHHSRNAQEHQAI 180

Query: 448 MSEFY-HTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKEL 506
           M+ FY H   +  RP +F +++ P++   ++ + D    + +L          + DR++ 
Sbjct: 181 MNGFYCHIPVRSPRPKIFVVSSIPIHSISMNLK-DLEKNLKDLMVMFSCQTVVVPDRRQ- 238

Query: 507 EKHVPMPSEV-VVEYDKAA----SLWSLH-------EQLKQMEVAVEEAAQSSSRRSKWQ 554
           +   P  ++V V+EYD       SL++ H       ++L+     + +A    +  S   
Sbjct: 239 DNIQPRNTDVTVLEYDSTTNDFNSLFTFHSTDSHDRKELQSYFCKLPQARDGGNAFSDES 298

Query: 555 FMGAR-----DAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQ 609
           +  +      +  A +   Q+   +   +S       ++L+ I     ELG WC  K+ +
Sbjct: 299 YTVSTQQLDDEIAAAQHFIQLQHDTVSIDSKRLIVTEKQLKRIRATFSELGVWCTIKLVK 358

Query: 610 SFL---TALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGF-- 664
             L    A  + +R    LD  F ++              + ++       + S+N +  
Sbjct: 359 EILGVTHAAASKKRKAVHLDDTFTDTDW------------QSSLKSSSTNSLPSQNDYTS 406

Query: 665 ---VEGGTNEIEEGELLDSHVVSGGEHVDVI-IG-------AAVADGKVTPKVQSLIKIL 713
              +      I+   LL +   +  +  D I  G         V D +   K+ +LI+  
Sbjct: 407 ISEIPTADISIKVHTLLKTLAKNHNQSTDTINFGKQPFQSLVYVHDDQTAEKLCNLIQ-- 464

Query: 714 LKYQHTEDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQET 772
                   F+   F+    +    +  +  E PS S   S S++ H  + E  T   Q T
Sbjct: 465 -----CSAFQKYPFIRCGFINGSTIHMMNTESPSYSV--SHSVVDH--AFEKGTNSTQNT 515

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG-RARKPGSDYILM 831
           + +F+   + +LV ++  +    + +C +VI FD  +  L Y + +G     PGS +I+M
Sbjct: 516 LQRFKSRELNVLVVSNFGQNRCHLPKCGLVILFDWPRKQLCYERLKGYTGGVPGSQFIVM 575

Query: 832 IERGN 836
           + +G+
Sbjct: 576 VAKGH 580


>gi|358332039|dbj|GAA50765.1| endoribonuclease Dicer homolog 4 [Clonorchis sinensis]
          Length = 1042

 Score =  149 bits (375), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 208/462 (45%), Gaps = 106/462 (22%)

Query: 1374 LKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ-KHEGQ 1432
            +K   + P PA  ++E+LT    ++    ER ELLGD+ L+ + +  ++   P+   EGQ
Sbjct: 561  VKPNEHVPNPA-DLVESLTLLGARDAVNLERLELLGDSVLQLISTLTVYSGSPEGADEGQ 619

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDT----KDGDSS 1488
            LT  R  +VSN  L   A+  G Q+Y     ++P       + P +D  +    +D D+ 
Sbjct: 620  LTARRVDLVSNSNLCNIAVRLGWQNYCTGQVYSPPDHF---IFPCYDLSSSVPYRDSDTR 676

Query: 1489 LFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
            LF +                                     L+ K+LAD+VEA++G +  
Sbjct: 677  LFVR-------------------------------------LTDKSLADMVEAIVGCFLQ 699

Query: 1549 EGGKDAANHLMKWIGIQVESDP----EEVGC--------------------PSRP----- 1579
              G  AA  L+ ++GI   ++P    +EVG                     P RP     
Sbjct: 700  HMGLPAAFRLLTYLGISPYANPSSQGKEVGAWDQLLSETQQNNRHHIRHSTPFRPLEVRP 759

Query: 1580 --------------ACVPESVLR-------SVDFHALEDALKIKFKDRGLLVEAITHASR 1618
                          + +P  + +       SV    L++ L  +FKD  LL+ A+TH S 
Sbjct: 760  TFYLPDRNCPAGSTSILPNEIEKDDLIERLSVRLVGLQNILGYQFKDISLLIRALTHQSS 819

Query: 1619 PSSGV-SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
            P + +   YQRLEF+GDAVL ++IT +L+  +    PG+LT+ R+  V+N + A   V+H
Sbjct: 820  PQTSLFGSYQRLEFLGDAVLGYVITIYLYEKHVEFDPGQLTESRSNIVSNNSLACAIVEH 879

Query: 1678 KLHVHLRHGSSALDRQIRDFVKEVLEELLKPG-----FNSFGLGDCKAPKVLGDIVESIA 1732
            +LH ++ H   A D  +  F++ +L+            N   L   +  K+L D+ E+I 
Sbjct: 880  QLHPYIIHNQPAFDTAV-TFIQFILDTTTSVSDQLELLNQEVLKGLRV-KILADVFEAIV 937

Query: 1733 GAIFLDSGRDTSVVWQVFQPLLDPMVTPETL--PMHPVRELQ 1772
            GAIF+D+    S V Q+   LLDP +    L  PM+P++ + 
Sbjct: 938  GAIFVDTKGSLSTVSQLIHRLLDPRIDDYLLRNPMNPLKSMH 979



 Score = 49.7 bits (117), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 54/190 (28%)

Query: 1369 LLAIQLKDKINYPVPASKILEALTAASCQETFC---YERAELLGDAYLKWVVSRFLFLKY 1425
            +L  Q KD        S ++ ALT  S  +T     Y+R E LGDA L +V++ +L+ K+
Sbjct: 799  ILGYQFKD-------ISLLIRALTHQSSPQTSLFGSYQRLEFLGDAVLGYVITIYLYEKH 851

Query: 1426 PQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTK-- 1483
             +   GQLT  R  +VSN  L    +   L  YI  ++            P FD      
Sbjct: 852  VEFDPGQLTESRSNIVSNNSLACAIVEHQLHPYIIHNQ------------PAFDTAVTFI 899

Query: 1484 ----DGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVV 1539
                D  +S+ DQ + + ++ L                          + L  K LADV 
Sbjct: 900  QFILDTTTSVSDQLELLNQEVL--------------------------KGLRVKILADVF 933

Query: 1540 EALIGVYYVE 1549
            EA++G  +V+
Sbjct: 934  EAIVGAIFVD 943


>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
          Length = 1482

 Score =  149 bits (375), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 235/556 (42%), Gaps = 86/556 (15%)

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQ 1356
            PL+  +      N L P    SE    E          +FL P L  +  +    V  A 
Sbjct: 920  PLLEVQAFPQRANFLIPLAAPSEGLPNEES--------IFLLPSLATVELVSNQDVYFAM 971

Query: 1357 RLPSIMRRVESMLLAIQLKDKI--NYPV---PASKILEALTAASCQETFCYERAELLGDA 1411
             LPS++R + ++L  + L++ +    PV   P S +  A+TA   QE   Y+R E LGD 
Sbjct: 972  YLPSVLRALANVLTVVSLRETLLAGSPVSQAPFSLLTTAVTAPVSQELSNYQRLETLGDT 1031

Query: 1412 YLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAA 1471
             LK+V +  LF  +P  HEG L R +   VSN+ L + A+SK L  +I  DRF P +W  
Sbjct: 1032 VLKYVTTIQLFADHPLWHEGYLARRKDHAVSNIQLAKQAISKRLYQWIIRDRFVPRKWRP 1091

Query: 1472 PGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLS 1531
              +  V  ++    ++   D +K   +                               LS
Sbjct: 1092 HYITDVDVQNVSTEETIPLDDKKKKTQ------------------------------ALS 1121

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVD 1591
            +K LADVVE+LIG  Y  GG D A       G+ +      V   +  A   E       
Sbjct: 1122 TKVLADVVESLIGAAYEHGGFDLAVDCTSIFGMGLTWKKIPVHIENILAITEELENPPPQ 1181

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSY- 1649
               +E  +  +F  + LLV+A+THAS      S  Y+RLEF+GD+ LD ++T  L+ +  
Sbjct: 1182 LALVERMIGYQFSRKALLVQALTHASYHGDTASMSYERLEFLGDSALDMIVTDFLYHAPG 1241

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAV------------------------KHKLHVH--L 1683
             N  PG +   + A VN+   A + +                        +  +H++  L
Sbjct: 1242 KNYKPGHMHIRKEALVNSHFLAFICLRTHTDVDGISHRWTPAEGVTTTPDRQTIHLYQCL 1301

Query: 1684 RHGSS-ALDRQIRDFVK------EVLEELLKPGFNSF-GLGDCKAPKVLGDIVESIAGAI 1735
             H S   LD Q   F +      ++ + L +     +  L   ++PK + D+VES+ GA+
Sbjct: 1302 LHSSHRVLDDQNVAFGRYKRGGQDIQDALDRDAIYPWAALTSLQSPKFVSDMVESLLGAV 1361

Query: 1736 FLDSGRDTSVVWQVFQPL-----LDPMVTPETLPMHPVRELQERCQQQAEGLEYK--ASR 1788
            F+D+  D   V  V + L     ++ +V  +    HP+  L     +Q    + K   +R
Sbjct: 1362 FVDAAGDLGAVRGVLRTLGVVGIMERIVADDVDVQHPISRLTIWADKQEPKRKAKLEVTR 1421

Query: 1789 SGNLATVEVYIDGVQV 1804
            +    +  V +DG +V
Sbjct: 1422 ADGNVSCAVLVDGSEV 1437



 Score =  121 bits (304), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 125/231 (54%), Gaps = 22/231 (9%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ ++L+++ + N +  L+TG+GKT IAVL ++    + +R+  K+ + FL P V 
Sbjct: 16  RTRGYQQEMLDESLRMNLVIALDTGSGKTHIAVLRMKL---ESERELSKV-SWFLAPTVA 71

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           LV QQ+EVI+      V    G      W D + W+   DT +V+V T QILL+ L H  
Sbjct: 72  LVEQQSEVIKSAIPVSVTAISGASEPKQWIDPKLWRSVLDTHRVIVSTPQILLDALHHGY 131

Query: 422 IKM-EAINLLILDECHHAVKKHPYSLVMSEFYHT---------TSKEKRPSVFGMTASPV 471
           I +   I LLI DE HHA+ KHPY+++M  FY +         T+   RP V G+TASP+
Sbjct: 132 IDLGRDIGLLIFDEAHHAMSKHPYNMIMQNFYFSLPPRSECVNTNGRMRPMVLGLTASPI 191

Query: 472 NLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYD 521
                   VD +     LE  LDS + + +  R+EL ++V  P    + YD
Sbjct: 192 ----YGGNVDASFH--ALERNLDSTIRSSRMHREELAQYVHRPVFKHIFYD 236



 Score =  114 bits (286), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 140/306 (45%), Gaps = 32/306 (10%)

Query: 720 EDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQEMRTF----------Q 768
           E +  ++FV R    L L +V   LP      +   L+G ++S     F           
Sbjct: 404 ESYSGLVFVTRRDTVLALAEVLRRLPQTGQLFRIGCLVGSSSSFSRHAFLDITRQLVIDS 463

Query: 769 MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
             +T+A+FR G   L+++TSVAEEG+DI+ C  VIRFDL    +++ QSRGRARK  S +
Sbjct: 464 HLDTLAEFRSGEKNLIISTSVAEEGIDIQACGSVIRFDLPPNTVSWAQSRGRARKSRSSF 523

Query: 829 ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVEST 888
           +LM E G    A   +     E+T  K      D + +         D      Y V ST
Sbjct: 524 VLMFENG----AEQRQKVEEWEQTEYKMMTLYNDPNRISGAVFEEDDDEEVDLQYVVPST 579

Query: 889 GAVVSLNSAVGLIHFYCSQLPSDRYS-----ILRPEFIMERH----EKPGGPT---EYSC 936
           GA+++L+SA   ++ +C+ LP+  Y      +  P+F  + H    E+ G P     +  
Sbjct: 580 GAILTLHSATSHLNHFCAVLPNSAYQYAAYDLDPPDFPEDWHSKQDEEKGIPVYQGPWGA 639

Query: 937 KLQLPCNAP--FEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE--Q 991
            + LP   P        P    + R AQ+ V   A  +LH+ G   D LLP   + E  Q
Sbjct: 640 TITLPRALPKHLRTFTTPREHRTKRSAQRHVAFQAYVELHKAGLLNDHLLPLTSAMEPDQ 699

Query: 992 QEKVDQ 997
            E+V Q
Sbjct: 700 GEEVKQ 705


>gi|221361575|emb|CAX18336.1| dicel-like 1 [Nicotiana benthamiana]
          Length = 79

 Score =  148 bits (374), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/79 (86%), Positives = 74/79 (93%)

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            VGDAVLDHLIT+HLFF+YT+LPPGRLTDLRAAAVNNENFARVAVKH LH+HLRHGSSAL+
Sbjct: 1    VGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALE 60

Query: 1692 RQIRDFVKEVLEELLKPGF 1710
            +QIRDFV EV  EL KPGF
Sbjct: 61   KQIRDFVSEVKNELSKPGF 79


>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1469

 Score =  148 bits (374), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 166/590 (28%), Positives = 262/590 (44%), Gaps = 115/590 (19%)

Query: 1316 EHSEEQEGEGEEI--LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQ 1373
            E  E +E  GE++  L+ TY     P +  + P+       A  LP+++R +  +     
Sbjct: 900  EELELRELYGEKLSELEVTY-----PLIVLLSPVDADY---AFLLPALLRSIGMLTTTHS 951

Query: 1374 LKDKINYP------VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
            L+  +  P      +P   ++ A+TA S  E   Y+R E LGD  LK+V    L  +YP 
Sbjct: 952  LQKAVFTPASPISSIPMQLLMVAITAPSSNERKNYQRLETLGDTVLKFVCGIQLLSEYPL 1011

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
             HEG LTR +   VSN+ L +  +++ L  +I  D     +W  P  L            
Sbjct: 1012 WHEGYLTRKKDHAVSNVRLAKENVARELYRWIIRDMLLGKKW-KPHYL------------ 1058

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
            S  D E +   DK+         E+ + +  + +G S S   LS+K LADVVE++IG  Y
Sbjct: 1059 SKKDAETTPEPDKMTV-------EEVNTKKKKKKGKSQS---LSTKVLADVVESIIGAAY 1108

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDF------HAL---EDA 1598
            + GG D     +K+  + ++  P     P+R   + + + R+ D       H L   E  
Sbjct: 1109 LHGGFDLGYECIKFFDLGLKWQP----LPTR---IEQLLSRARDSEETPYPHQLVDVESM 1161

Query: 1599 LKIKFKDRGLLVEAITHAS--RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY-TNLPPG 1655
            L   F  + LL+EA+THAS  +     S Y+R+EF+GD++LD ++T +L+ +      PG
Sbjct: 1162 LGYTFNHKLLLIEALTHASYQQDQYTSSSYERMEFLGDSILDMIVTDYLYRAPGKEYSPG 1221

Query: 1656 RLTDLRAAAVNNENFARVAVKHKLHVH--------------------------------- 1682
             +   ++A VN    A + ++  LH                                   
Sbjct: 1222 HMHLRKSAVVNAHFLAFICLRTCLHFDASMPRPSPDSQGDQGPVKIELAPDSQEIYLWQC 1281

Query: 1683 LRHGSS-ALDRQIRDFV-----KEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGA 1734
            L H S   LD Q   F+     K V+E+ L+ G  F    L   +APK L D+VES+ GA
Sbjct: 1282 LLHSSPRVLDDQSNTFIRFRKCKAVIEKALEKGIIFPWAALTRLQAPKFLSDMVESLIGA 1341

Query: 1735 IFLDSGRDTSVVWQVFQP-----LLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRS 1789
            IFLDS  D   V  V +      +L+ +V  +   +HPV  L +   +  + +EYK  +S
Sbjct: 1342 IFLDSNGDMDCVKGVLRKTGIIQILERIVRDDVDILHPVSRLSDWASKNDKEIEYKFEKS 1401

Query: 1790 -GNLATV-------EVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             GN++ +       E+    V  G A   + K A   AA  A+   K ++
Sbjct: 1402 KGNVSCIILVNGKEEIRETAVYRGTASQDEVKFA---AAEKAILTFKLRD 1448



 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 17/217 (7%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQ ++LE++ +KN I  L+TG+GKTLIAVL ++   +++ R+  K+   F  P V L
Sbjct: 13  TRGYQQEMLEESLRKNIIIALDTGSGKTLIAVLRLK---HEIHREPTKV-CWFFAPTVAL 68

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQ  VI+      VG   G +  D W +A  W++   T +V+V T Q+ L+ LRH  +
Sbjct: 69  CEQQKSVIQTYLPVSVGLISGSLEPDQWRNAALWEKVIRTHRVMVSTPQVFLDALRHGYL 128

Query: 423 KM-EAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTASPVNLKGVS 477
            +   I LL+ DE HHAV  HPY+ +M EFY       S   RP+V G+TASP+    V 
Sbjct: 129 VLGRDICLLVFDEAHHAVDNHPYNRIMQEFYFDLPIQGSDFVRPAVLGLTASPIYGGNVV 188

Query: 478 SQVDCAIKICNLESKLDSVV-CTIKDRKELEKHVPMP 513
                      +E+ LDS +    + R EL + V  P
Sbjct: 189 KAFQ------TIEANLDSTIRAPRRHRAELAQFVYKP 219



 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 55/325 (16%)

Query: 705 KVQSLIKILLKYQ-----HTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGH 758
           KV+ L++ LL  +     H E +  IIFV+R  A L L ++ +  P +    +   LIG 
Sbjct: 375 KVRVLVECLLAEKAEAEAHDEAYSGIIFVQRRDAVLALAELLSNHPQTKDQFRVGLLIGT 434

Query: 759 NNSQEMRTFQ----------MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           + S                  ++TIA F+ G   L+V+TSVAEEG+DI+ C  VIR+D  
Sbjct: 435 SESSYRHAVMDITRNLIRESQEDTIADFKIGEKNLIVSTSVAEEGIDIQACGSVIRWDPP 494

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
             + ++ QSRGRAR+  S + +M E G          ++N ++  + E +ER  ++   D
Sbjct: 495 PNMASWAQSRGRARRQRSTFTVMFEDG----------SKNQKDVAKWENLERQMVALYND 544

Query: 869 TSRLISV------------DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDR---- 912
            +R +              +     V++  STGA+++L+SAV  +  +C+ +P+      
Sbjct: 545 PTRDLEFILDEQDSDEMEEEEDDDWVFRHPSTGALLTLHSAVSHLSHFCAVIPNSAHVDN 604

Query: 913 ---YSILRPEFI-----MERHEKPGGPTE--YSCKLQLPCNAPFEKLEGPV---CSSMRL 959
              Y I  P+FI     +E H +   P    Y  K+ LP   P    E  V     +   
Sbjct: 605 RPLYDIDPPDFIEGWHALEPHARAIIPYTGPYGSKVTLPRALPLPTREFFVERMYDTKIS 664

Query: 960 AQQAVCLAACKKLHEMGAFTDMLLP 984
           A +     A   L+E G   D LLP
Sbjct: 665 AHRHAAFRAYFSLYEAGLLNDNLLP 689


>gi|33772149|gb|AAQ54511.1| DEAD/DEAH box helicase factory [Malus x domestica]
          Length = 70

 Score =  148 bits (374), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/70 (98%), Positives = 69/70 (98%)

Query: 401 DTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR 460
           DTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT KEKR
Sbjct: 1   DTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKR 60

Query: 461 PSVFGMTASP 470
           PSVFGMTASP
Sbjct: 61  PSVFGMTASP 70


>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus
           heterostrophus C5]
          Length = 1426

 Score =  148 bits (373), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 185/717 (25%), Positives = 309/717 (43%), Gaps = 107/717 (14%)

Query: 300 PEE--QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           P+E    R YQ +++ ++ K N I  ++TG+GKT IA+   R+   +L+      L  FL
Sbjct: 21  PDEVFHLRGYQAEMIAESMKANIIVVMDTGSGKTHIAIERARA---ELEMCKPDKLVWFL 77

Query: 358 VPKVPLVYQQAEVIREQT-GYVVGHY--CGEMGQDFWDAQR-WQREFDTK-QVLVMTAQI 412
            P V L  QQ EV +    GY  GH   CG    + W  Q  W   F    ++++ T QI
Sbjct: 78  APTVALCEQQYEVFQANLPGY--GHLLLCGR-DVELWTTQSVWNNVFQHNVRIVISTHQI 134

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTAS 469
           LL+ L H  + ++ + LLI DE HH   KHP   +MS+FY    T S    P V G++AS
Sbjct: 135 LLDALTHGFMSLQRLALLIFDEAHHCTLKHPAHKIMSDFYTPQLTDSTFALPKVLGLSAS 194

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAAS--- 525
           PV     + Q   AI     E  L + V T K  R EL + V  P  + V Y +  S   
Sbjct: 195 PVMRAAANKQGLEAI-----ERNLQATVRTPKLYRSELLRSVHRPELIQVNYTRDPSTGS 249

Query: 526 ----LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDG 581
               L++L       ++  +    S   + +  +  +R      + R+ Y        D 
Sbjct: 250 PSVLLFALKNACVNYDLMDDPYVISLLEQQRNGYNVSRQLQKLWDSRKTYCY------DQ 303

Query: 582 AANLIQKLRAINYALGELG-QWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSL 640
              L+ K  A+   LG    +   YK    F   L +D+  +   D   ++ +L K+   
Sbjct: 304 LKQLVSKAEAMAQELGNSAMEHYVYKCVNDF-KNLVHDQSCDLSTD---EKRHLLKIFQH 359

Query: 641 LQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG 700
           L      G  S                         +L+S        +D+I+  AV + 
Sbjct: 360 LPTRHTTGISSP------------------------ILESLSHKVNVLIDIIVAEAVTNS 395

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHN 759
                               +F +I+FVE+ V    L ++    P + + ++  + +G +
Sbjct: 396 --------------------NFTSIVFVEQRVWVASLAEILTSHPRTKALLRVGTFVGMS 435

Query: 760 NSQEMRTF--------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
            S + ++           Q  +  F+ G + L++ATSV EEG+DI  C++V+ F+  KT+
Sbjct: 436 QSSQHKSSVFNYADPKNQQTVLDDFKAGIINLVLATSVLEEGIDIPSCHLVVCFEAPKTL 495

Query: 812 LAYIQSRGRARKPGSD-YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTS 870
             ++Q RGRAR+  S  YIL+ + G++  AT   + +  E  ++K   +    + L+   
Sbjct: 496 KGFVQRRGRARQQRSRYYILVPDMGDVYSAT---SWQYLEAQMKKAYEDHERQTALRSEE 552

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
             I  +       ++E+TGA+++L++A+  ++ +C++L S  Y   RPEF     +    
Sbjct: 553 ECI--EEYDSRCLRIETTGALLTLDNAMQHLYHFCARLSSGTYVDARPEF-----DFTNI 605

Query: 931 PTEYSCKLQLPCNAPFEKLEGP---VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             + S K  LP +               + R+AQ+     A K L+  G   + LLP
Sbjct: 606 NGQISAKASLPISVDLTVRTANSSRTWKTERMAQKDAAFEAYKTLYFAGLVNENLLP 662



 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 188/443 (42%), Gaps = 99/443 (22%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK-----ILEALTAASC 1396
            C +  LP S    A   PSI  ++E+ ++A  L+  I   V         +L ALT ++ 
Sbjct: 907  CVVDNLPASYAILASLFPSITHKLETYMVANTLRTTILQSVDIDVSHLPILLLALTPSAT 966

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            +    Y+R E LGD  LK++ S  L   + +  EG LT  + ++VSN  L + AL+KGL 
Sbjct: 967  EGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKGKLVSNGYLARAALAKGLD 1026

Query: 1457 SYIQADRFAPSRWA---APGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
             +I   RF  ++W       +L + +  TK        QE+S                  
Sbjct: 1027 GFILYKRFTGAKWKPRYVSQMLSITNPPTK--------QERS------------------ 1060

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WIGIQV 1566
                              SK +ADV+E+LIG  YV GG   A   +K       W+ I  
Sbjct: 1061 ------------------SKLIADVIESLIGASYVVGGFSKAFACVKALLPLENWMPIPQ 1102

Query: 1567 ESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC- 1625
             +D      P + + V    + ++  HA        F ++ LL+EA+TH +       C 
Sbjct: 1103 ANDTLYNAAPEQDSVVGAITVENLVGHA--------FNNKALLLEALTHPTFRGLNTFCS 1154

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN------------------- 1666
            Y+R EF+GDAVLD++++K L+     LP  ++  +R A VN                   
Sbjct: 1155 YEREEFLGDAVLDYIVSKRLYSHRPELPHYKMHGIRTAMVNASFLAYSMFETTVEEVFTN 1214

Query: 1667 NENFARVAVKHKLHVHLRHGSSAL----------DRQIRDFVKEVLEELLKPGFNSFGLG 1716
             E     A +  L   LR  S  L            + R  + E L+   +  +++  L 
Sbjct: 1215 KETLQPEAHQKALWQFLRFTSHELVTSRNLAIQRHSEARIQIAEALQHDARFPWHALSLT 1274

Query: 1717 DCKAPKVLGDIVESIAGAIFLDS 1739
            D   PK L DIVES+ GA+++DS
Sbjct: 1275 D--PPKFLSDIVESMIGALYIDS 1295



 Score = 51.6 bits (122), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 17/156 (10%)

Query: 1585 SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKH 1644
            ++L+SVD         I      +L+ A+T ++  + G   YQRLEF+GD +L  + + H
Sbjct: 942  TILQSVD---------IDVSHLPILLLALTPSA--TEGEENYQRLEFLGDCILKFITSLH 990

Query: 1645 LFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEE 1704
            L  ++  +P G LT  +   V+N   AR A+   L   + +      +    +V ++L  
Sbjct: 991  LMATHLRMPEGMLTGKKGKLVSNGYLARAALAKGLDGFILYKRFTGAKWKPRYVSQMLSI 1050

Query: 1705 LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
               P          ++ K++ D++ES+ GA ++  G
Sbjct: 1051 TNPPTKQE------RSSKLIADVIESLIGASYVVGG 1080


>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
 gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum
           commune H4-8]
          Length = 1342

 Score =  147 bits (372), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/217 (41%), Positives = 121/217 (55%), Gaps = 9/217 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++  QA+  N IA L+TG+GKT I ++LI+ I +  Q QNK  L VFLVP+V LV
Sbjct: 1   RQYQEEIFRQAQAGNRIAALDTGSGKTYIGLMLIKWIAS--QPQNKDKLIVFLVPRVALV 58

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ   I   +   V    G+   D  D + W   F T  VLVMTAQI L++L HS   +
Sbjct: 59  EQQGNFIAANSTLRVTQKHGQNALDMADREGWAAVFATSDVLVMTAQIYLDLLTHSHWSI 118

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
              +L+I DECHHA K  PY  +M E+ H  +  +RP VFG+TASP     +    +   
Sbjct: 119 AHTSLIIFDECHHAQKNDPYRQIMDEYRH-CAPGQRPRVFGLTASP-----IWDARNPGK 172

Query: 485 KICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEY 520
            +  LE+KLD+ V  ++    EL+ H   P EV+  Y
Sbjct: 173 ALAALETKLDAQVVGVRLHAGELDAHTARPREVIKTY 209



 Score =  145 bits (366), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 224/491 (45%), Gaps = 73/491 (14%)

Query: 1358 LPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFCYERAELLGDAYLKWV 1416
            LPS++RR   +  A + +  +  P +    +++ALT       F  +R E LGDA L+  
Sbjct: 899  LPSLLRRATDVYRADRARLALGLPYIERDLLIQALTLPCAGMPFNNQRLETLGDAVLELS 958

Query: 1417 VSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLP 1476
             +  LF KYP +HEGQLT +RQ  +SN  L   A    L+ ++ ++  + S W       
Sbjct: 959  TTVHLFNKYPHRHEGQLTPLRQICISNKCLLTRAREVQLERFLTSETHSLSIW------- 1011

Query: 1477 VFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLA 1536
                                                D +ED E+    +  R+   ++L 
Sbjct: 1012 ------------------------------------DYVEDSEVPARCAR-RLFPRRSLQ 1034

Query: 1537 DVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALE 1596
            D +EA++G  Y+ GG D A H    +G+             R   VP   L    F  L+
Sbjct: 1035 DCMEAILGASYLTGGIDTALHAGTALGLAFGGSVPWPRRYPRRRRVPTPDL----FSELQ 1090

Query: 1597 DALKIKFKDRGLLVEAITHASRPS-SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPG 1655
              L   F+D GLL EA+TH+S  S      Y+RLEF+GDAV++  +  +L+  + +    
Sbjct: 1091 AKLGYTFRDGGLLCEALTHSSFASLDSYGSYERLEFLGDAVINLAVVDYLYRKFPDANSD 1150

Query: 1656 RLTDLRAAAVNNENFARVAVKH-KLH----VHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
            +L+  RA AV N+  + ++VKH +LH    V+    S A+++       +   E+L  G+
Sbjct: 1151 QLSLPRARAVCNQALSALSVKHLQLHKSVLVNNVELSIAINKHAPILEDKPYPEILVKGW 1210

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPV 1768
                      PKVL DI ESI GA+F+D+G D  +   V +  ++ ++      +P  PV
Sbjct: 1211 K------LDPPKVLSDIFESIVGAVFVDTGYDYEITAAVVEQAMEGLLVHLSPAMPRDPV 1264

Query: 1769 REL-----QERCQQQAEGLEYKASRSGNLAT-VEVYIDGVQV-GVAQNPQKKMAQKLAAR 1821
             EL     +  C++Q   +E++  R       + +Y+ G  + G        +++KLA+ 
Sbjct: 1265 SELIIWVAKSTCREQ---IEFRFVRRKQYPDGIAIYLHGTLLAGPITTMNHLVSRKLASE 1321

Query: 1822 NALAVLKEKET 1832
             ALA L++ ++
Sbjct: 1322 RALADLRDPQS 1332



 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 148/310 (47%), Gaps = 28/310 (9%)

Query: 690 DVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-S 748
           D+    A+ D   +PKV +L+ +LL  Q     R I+FV++   AL L  +   L  L  
Sbjct: 326 DLAASDALLDDWFSPKVHALVDVLLA-QDLATSRGIVFVDQRQVALCLALILPRLSRLQG 384

Query: 749 FVKSASLIGHNNSQE-MRTFQMQETIA-KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
            V+ AS IG N   +  +    Q  +A +FR G V LL+ATSVAEEG D + C++V+RFD
Sbjct: 385 LVRCASFIGQNPGIDGPKAIGSQRDVASQFRSGEVNLLIATSVAEEGHDFQACDLVVRFD 444

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLR-----KEAIERT 861
             + ++ Y+QSRGRAR   S +++M+  G+          R  E  LR     + A + T
Sbjct: 445 PLQHLVGYLQSRGRARNKSSMFVVMLPEGDEPSRAKYDFFRKCEPQLREVYNTRSAEDAT 504

Query: 862 DLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFI 921
            ++   D   L          + V STGA+++ ++A+GL+   CS +P D +S       
Sbjct: 505 SVNVDDDAEELSPEMLAERERFVVPSTGAILTYDNAIGLLGHLCSLIPRDPFS------- 557

Query: 922 MERHEKPGGPT---EYSCKLQLPCNAPFEKLE----GPVCSSMRLAQQAVCLAACKKLHE 974
                 P  P    ++   +QLP + P    E    G   ++ + A+++      + LH 
Sbjct: 558 -----PPPAPVYTGDFISTVQLPRSIPLPPAELVFQGATKATKKEAKRSAAFRTVRYLHA 612

Query: 975 MGAFTDMLLP 984
              F   LLP
Sbjct: 613 KDVFDAYLLP 622


>gi|426204654|gb|AFY13245.1| dicer-2, partial [Schistocerca gregaria]
          Length = 357

 Score =  147 bits (371), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 172/352 (48%), Gaps = 41/352 (11%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI--------NYPVP---- 1383
            +  PELC I PL  +L      LPS++ ++  +  A +L   +        +Y +P    
Sbjct: 6    YFNPELCDIIPLSAALCLKIHLLPSVLHKLTVLAAAYELCQMVPISKGSVLDYEMPENAG 65

Query: 1384 ---------------ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1428
                            + + +ALTAASC + F  E  E LGD++LK+ VS FLF+ Y   
Sbjct: 66   DIQLLNSDFGGCGLTLNDVEQALTAASCDDLFNSETLETLGDSFLKFAVSLFLFIHYKSH 125

Query: 1429 HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSR-WAAPGVL---PVFDEDTKD 1484
            HEG L+ ++ ++VSN   Y  A  K + S +Q  RF P   W  PG     PV  +   +
Sbjct: 126  HEGTLSSIKMKVVSNWHFYNVAKGKDIGSKLQIHRFVPDETWVPPGFTVPQPVRRKFLSE 185

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
              +  + ++ + +E +   D+  +     ++            + +S K+LAD +EAL G
Sbjct: 186  HIAPEYLKKLNPSEIEHSMDQLVDMRNTWNLAMPNNSELFIGVQTVSDKSLADALEALTG 245

Query: 1545 VYYVEGGKDAANHLMKWIGI--QVESDPEEVG--CPSRPACVPESVLRSVDFHA-----L 1595
            VY    G   A  L+  +G+    ++ P  +    P RP        + +DFH      L
Sbjct: 246  VYLKAYGLSGAIALLNSLGVLPAKKASPHILFERPPERPLLQESLRHQYLDFHLGDTEEL 305

Query: 1596 EDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
            E+ L  +FKDRG L++A+TH S   + ++ CYQRLEF+GDA+LD L+T +++
Sbjct: 306  EETLNYRFKDRGFLLQALTHPSWSDNRITDCYQRLEFLGDAILDFLVTSYIY 357


>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
          Length = 1362

 Score =  147 bits (371), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 179/697 (25%), Positives = 295/697 (42%), Gaps = 124/697 (17%)

Query: 324 LETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHY 382
           ++TG+GKT +AVL IR+   +++R + K +  FL P V L  QQ  V++ Q   V +   
Sbjct: 1   MDTGSGKTQVAVLRIRA---EVERTSSKHIVWFLAPTVSLCAQQFAVLQSQIPEVQIKFL 57

Query: 383 CGEMGQDFWDAQ-RWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKK 441
            GE   D W  Q  W       +++V T QILL+ L H+ ++ME ++L++ DE H+ + K
Sbjct: 58  SGEDNVDAWSDQGTWDEVLHNVRIVVSTYQILLDALSHAFVRMERLSLVVFDEAHNCIGK 117

Query: 442 HPYSLVMSEFYHTTSKEKR-----PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSV 496
            P S +M+ FYH   +EKR     P + G+TASP       S+ +    I  LE+ LD+V
Sbjct: 118 SPGSKIMTVFYH---EEKRRGHHIPHILGLTASPT----FGSKAE---GIVTLEATLDAV 167

Query: 497 V-CTIKDRKELEKHVPMPSEVVVEY------DKAASLWSLHEQLKQMEVA----VEEAAQ 545
                  R +L   V  P+   V Y      +   SL SL + ++ +++     V     
Sbjct: 168 CKSPTMHRSDLLVCVRKPTMAFVSYQPQECPELPGSLRSLRKVIQSLDILDDPYVLHLQS 227

Query: 546 SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
             + RS+ + M      A  E    Y  ++ T     ANLI   R I     E   W   
Sbjct: 228 EGTDRSRRELM------AVLESHDTYIQNQMTSFGRQANLI--FRDIGIWATEYYIWV-- 277

Query: 606 KVAQSFLTALQNDERANYQLDV--KFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENG 663
            V   F  ALQ+    +  LD   K ++ YL+ V+S ++C                    
Sbjct: 278 -VISRFTAALQSQ---STWLDTWKKEEKEYLAMVLSQVEC-------------------- 313

Query: 664 FVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFR 723
                            H  S  EH       ++    ++ KV +LI+ L   Q   D  
Sbjct: 314 -----------------HCPS--EH-------SINREVLSEKVYTLIEQL--SQDKTDVI 345

Query: 724 AIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNNSQ-------EMRTFQMQETIAK 775
            I+F        VL  + A    L    +  +++G +  Q       ++   +  +++ +
Sbjct: 346 GIVFARERATVSVLCHLLASHKLLRERYRIGAMVGTSQFQARKRDVWDLSRVEDLQSLHQ 405

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILM---- 831
           FR G+  LL+ATSV EEG+D+  CN+V  FD    + ++IQ RGRAR   S  +++    
Sbjct: 406 FRTGKTNLLIATSVLEEGIDVPACNLVFCFDNPPNLKSFIQRRGRARMRESKLLMLHSSE 465

Query: 832 -IERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGA 890
            I +   +    +++    +E   +   +  D    KD             ++ ++ TGA
Sbjct: 466 SIPKEWEAMEAEMKSQYEEQERELERLQDMEDTEESKD------------MMFVIDRTGA 513

Query: 891 VVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLE 950
           V+ L++A   +   C  L    +   RP++I+++ +    P      + LP   P    +
Sbjct: 514 VLDLDNAKQHLDHLCRILSPGEFIDWRPDYIIQKQDTSEAPY-LRVTVVLPSYLPSHVRK 572

Query: 951 G---PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
                   S R A +     A   L++ G   D LLP
Sbjct: 573 ADSQKAWKSERNATKDAAFQAYVDLYKAGLVNDNLLP 609



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 230/560 (41%), Gaps = 116/560 (20%)

Query: 1344 IHPLPGSLV--------RGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALT 1392
            ++P+P + V        R    +PSI+ R+E+ L+A +L   +  P+  S    +L A++
Sbjct: 836  VYPMPWAKVDTVSTDYARFGVLIPSILHRIETHLVARELSAGLLRPLAISDPALVLTAIS 895

Query: 1393 AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
              S  E   YER E LGD+ LK+  +  +    P   E  L+  +  +V+N  L + A+ 
Sbjct: 896  TGSAAEPTNYERIEFLGDSILKFSTTINVAALNPDWPERLLSFKKDGIVANSTLCKAAIK 955

Query: 1453 KGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYED 1512
             GL  +I    F   +W      P+                                Y D
Sbjct: 956  HGLDRFILTKPFTGQKWR-----PI--------------------------------YVD 978

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE 1572
            D +      GD  S R +S+KTLAD+VEALIG   ++GG + A   M     Q++    +
Sbjct: 979  DVLH----RGDEKSTRRISTKTLADIVEALIGASMIDGGLEKALKCMSIFLQQIKWRTLD 1034

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEF 1631
                +     P  V        LE  +  +FK + LLV+++THAS    + + C +RLEF
Sbjct: 1035 DCRQALYDAAPPDVELPSTLEPLEQLVGHEFKKKALLVQSMTHASFTLGNTLGCLERLEF 1094

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK------------- 1678
            +GD+VLD++I   LF     L    +  L+ A VN +    ++++               
Sbjct: 1095 IGDSVLDYVIVSRLFAVTPPLSHQTMHLLKTAMVNGDFLGFLSLEQSVSQDEVVIGGDPT 1154

Query: 1679 --------------LHVHLRHGSSALDRQ----------IRDFVKEVLEELLKPGFNSFG 1714
                          L   +RH S A+  +          +RD + + +E      +    
Sbjct: 1155 GKEPILRHSRFSLPLWKFMRHQSPAIGLEEVKVSKRYAGLRDQIIDSMER--GQTYPWAL 1212

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL-----LDPMVTPETLPMHPVR 1769
            L   +  K   DI ES+ GA+++DSG D  V  +V +       LD ++      +HP  
Sbjct: 1213 LARMQLRKFYSDIFESLLGAVYVDSG-DLEVCARVVERFGILGYLDRILRDNVHALHPKE 1271

Query: 1770 ELQERCQQQAEGLEYKASRS-------------GNLATVE----VYIDGVQVGVAQNPQK 1812
            EL     +++        ++             G    VE    V  D V+V  A+    
Sbjct: 1272 ELGHLADKESVTYVLDVRQTDEGEKEYLCKVLVGTRCVVEVDGGVTRDEVKVKAAEAAVS 1331

Query: 1813 KM-AQKLAARNALAVLKEKE 1831
            K+ A+KLAA+    V++E++
Sbjct: 1332 KLKAEKLAAKTEGMVIREED 1351


>gi|357619534|gb|EHJ72068.1| putative dicer 1 [Danaus plexippus]
          Length = 754

 Score =  147 bits (371), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/255 (40%), Positives = 140/255 (54%), Gaps = 25/255 (9%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            + ALE+ L+ +F+DR LL+ A+THAS  ++ ++ CYQRLEF+GDA+LD+LIT+HL+    
Sbjct: 502  YDALENTLQYRFRDRSLLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLYEDPR 561

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK-------EVLE 1703
               PG LTDLR+A VNN  FA +A +H  H + RH S  L+  +  +VK        + E
Sbjct: 562  RHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTKYVKIQEENGHSISE 621

Query: 1704 ELLKPGFNSFGLG-DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP-- 1760
            E      +      D + PK LGD+ ES+AGAIFLDSG   + VW+    LL   +    
Sbjct: 622  EHYLIQEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLAAVWRAVGGLLRAELDAFS 681

Query: 1761 ETLPMHPVRELQERCQQQAEGLEYKASRSGNLA-------TVEVYIDGVQVGVAQNPQKK 1813
               P  PVREL E     AE    K  +   LA        VEV+  G   GV +N   +
Sbjct: 682  AAAPKSPVRELLE-----AEPDTAKFGKPERLADGRRVRVCVEVFGRGSFKGVGRN--YR 734

Query: 1814 MAQKLAARNALAVLK 1828
            +A+  AAR AL  L+
Sbjct: 735  IAKGTAARCALRHLR 749



 Score = 60.5 bits (145), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 35/201 (17%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHE-GQLTRMRQQM 1440
            S +L ALT ASC     T CY+R E LGDA L ++++R L+ + P++H  G LT +R  +
Sbjct: 517  SLLLTALTHASCHNNTLTDCYQRLEFLGDAILDYLITRHLY-EDPRRHSPGALTDLRSAL 575

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            V+N +    A   G   Y         R  +PG+  V  +  K  +    +   S++E+ 
Sbjct: 576  VNNTIFATLAARHGFHKYF--------RHMSPGLNEVLTKYVKIQE----ENGHSISEE- 622

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
                  +   ++D+ME  E         V   K L D+ E++ G  +++ G   A  + +
Sbjct: 623  ------HYLIQEDEMEQAE--------DVEVPKALGDLFESVAGAIFLDSGMSLAA-VWR 667

Query: 1561 WIG--IQVESDPEEVGCPSRP 1579
             +G  ++ E D      P  P
Sbjct: 668  AVGGLLRAELDAFSAAAPKSP 688



 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 1380 YPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQ 1438
            +P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+   P  HEG+L+ MR 
Sbjct: 286  HPGPSPSVILQALTMSNANDGINLERLETIGDSFLKFAITAYLYCALPAVHEGKLSHMRS 345

Query: 1439 Q 1439
            +
Sbjct: 346  K 346


>gi|443427939|pdb|2LRS|A Chain A, The Second Dsrbd Domain From A. Thaliana Dicer-like 1
          Length = 71

 Score =  147 bits (371), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/70 (88%), Positives = 68/70 (97%)

Query: 1859 NDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDSA 1918
            NDICLR+NWPMP YRCV+EGGPAHAKRFT+ VRVNT+D+GWTDEC+GEPMPSVKKAKDSA
Sbjct: 1    NDICLRKNWPMPSYRCVKEGGPAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSA 60

Query: 1919 AVLLLELLNK 1928
            AVLLLELLNK
Sbjct: 61   AVLLLELLNK 70


>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
 gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
          Length = 1348

 Score =  147 bits (370), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 180/344 (52%), Gaps = 27/344 (7%)

Query: 703  TPKVQSLIKILLKYQHT---ED--FRAIIFV-ERVVAALV---LPKVFAELPSLSFVKSA 753
            TPK++ L+++L  ++ T   ED     I+FV ERVVA ++   L +V  E+   +FV+  
Sbjct: 406  TPKLKKLLEVLRVFRPTGPEEDSSLCGIVFVKERVVARVLCAWLGRVAEEVAPYAFVRPH 465

Query: 754  SLIGH------NNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
             ++GH      +  +   +F+ Q + + +FR     LLVATSV EEG+D+ +C++V+RFD
Sbjct: 466  FVVGHGGVAGQSTKESGMSFKQQCKVLEQFRRQECNLLVATSVVEEGMDVPKCSLVVRFD 525

Query: 807  LAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHL 866
                  +Y+QS+GRAR   S Y++M+ R +   +     A +  E+L             
Sbjct: 526  FPPDYRSYVQSKGRARARRSLYLMMVSRDDCQLSCSNLQAYHVVESLLMNKCRERKAPLD 585

Query: 867  KDTSRLISVDAVPGTVYQVESTGAV-VSLNSAVGLIHFYCSQLPSDRYSILRPEFIM--- 922
             +     +VD +      V+  GA  +++ SA+GL++ YC +LPSD ++ L+P++ +   
Sbjct: 586  SEVVLSFAVDEMLPPYMPVKRDGAARITMTSAIGLVNRYCVKLPSDIFTRLQPDYTILPV 645

Query: 923  ERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
             R +K      Y C + LP  +P  E ++G    + R A+ A  L  CK+LH+MG   D 
Sbjct: 646  NREDK----EYYVCTVYLPMTSPLKEPIQGQPMETKRYAKMAAALETCKRLHQMGELDDN 701

Query: 982  LLPDKGS--GEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQ 1023
            LLP K +    ++ + +    G P PGT + R  Y + V  + +
Sbjct: 702  LLPVKRTLALLEEPEEEAEQPGVPKPGTKKRRRVYSKRVCRLFR 745



 Score =  131 bits (329), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 170/367 (46%), Gaps = 75/367 (20%)

Query: 1533 KTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-----ESDPEEVGCPSRPACVP--ES 1585
            K++AD VEALIG Y +  G   A  +MKW+G+++     E   E  G        P   +
Sbjct: 984  KSVADSVEALIGAYLLVCGPVGALKVMKWMGVRLTQCDLEGGAEGSGVRGFWGFPPPQTA 1043

Query: 1586 VLRSV-----DFHAL-----------EDALKIKFKDRGLLVEAITHASRPSSGVS-CYQR 1628
            +LR V     D  AL           E AL   F DR  L++A+THAS   + ++ CYQR
Sbjct: 1044 LLRHVPHPEEDLAALMELMADTVADVERALGYTFVDRSFLLQAVTHASYYRNRLTDCYQR 1103

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            LEF+GDAV+D+L+T++L+       PG+LTDLR++ VNN  FA + VK+ LH   +H + 
Sbjct: 1104 LEFLGDAVIDYLVTRYLYELPRKFNPGQLTDLRSSLVNNTFFASLVVKYGLHGCFKHCNP 1163

Query: 1689 ALDRQIRDFVK------------------------------------------EVLEELL 1706
            +L   I  FV                                           +VLE   
Sbjct: 1164 SLFSAIGRFVNYQAQAREEEREEGELPDEDREERQEFPDLNAPLDGAEDDTYWKVLERHY 1223

Query: 1707 KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PETLP 1764
                      + + PK LGD+ ES+ GA+FLD G     VW++   +    +    + +P
Sbjct: 1224 CHEEECQEPEEVEVPKALGDLFESLMGAVFLDCGMSLDRVWRIIYRMFGQEIESFSQNVP 1283

Query: 1765 MHPVRELQERCQQQAEGLEYKASRSG-NLATVEVYIDGVQVG-VAQNPQKKMAQKLAARN 1822
            + PV+EL ER +    G    A   G N   V++ + G     VA+N  KK+A+   A+ 
Sbjct: 1284 VPPVKELTERFRDARFG---PAELLGNNKVKVQLTVTGKTFSCVAKN--KKLAKMALAKK 1338

Query: 1823 ALAVLKE 1829
             L ++K+
Sbjct: 1339 CLRMVKQ 1345



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 121/253 (47%), Gaps = 56/253 (22%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVPLV 364
           +++++ E AK+ NTI  L TG GKT IAV+LI+ +  D++   +       FL P VPLV
Sbjct: 115 FEVELFEGAKEANTIVCLGTGTGKTFIAVMLIKEMEKDIRVPFEEGGKRTFFLAPTVPLV 174

Query: 365 YQQAEVIREQT-----GYV----------------------------------------- 378
            QQ + I+  T     GY+                                         
Sbjct: 175 AQQQKAIQAHTSLHVGGYIGDMNVDNWDAARWHKEFVNSQVKLLFLPLVAQQQKAIQAHT 234

Query: 379 ---VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDEC 435
              VG Y G+M  D WDA RW +EF   QVLVMT +I   IL H+ + +  +NLLILDEC
Sbjct: 235 SLRVGGYIGDMNVDNWDAARWHKEFVNSQVLVMTPEIFKIILHHAFLPLSRVNLLILDEC 294

Query: 436 HHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDS 495
           H AVK+H Y  +M        +   P V G+TAS +N K   +QV+   K+  LE  + S
Sbjct: 295 HRAVKQHTYREIM-RCMDVVEQGLCPRVLGLTASVINSKATEAQVE--HKMHGLEMAMRS 351

Query: 496 VVCTIKDRKELEK 508
            V T   RK LEK
Sbjct: 352 RVLTA--RKLLEK 362



 Score = 66.2 bits (160), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 3/99 (3%)

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMT 467
           MT +I   IL H+ + +  +NLLILDECH AVK+H Y  +M        +   P V G+T
Sbjct: 1   MTPEIFKIILHHAFLPLSRVNLLILDECHRAVKQHTYREIM-RCMDVVEQGLCPRVLGLT 59

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKEL 506
           AS +N K   +QV+   K+  LE  + S V T+ D+  +
Sbjct: 60  ASVINSKATEAQVE--HKMHGLEMAMRSRVLTVSDQASM 96



 Score = 49.7 bits (117), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 1322 EGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP 1381
            EG  E    + ++ F PP+   +  +P       + L ++M  +   +  ++      + 
Sbjct: 1023 EGGAEGSGVRGFWGFPPPQTALLRHVP----HPEEDLAALMELMADTVADVERALGYTF- 1077

Query: 1382 VPASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQK-HEGQLTRMR 1437
            V  S +L+A+T AS      T CY+R E LGDA + ++V+R+L+ + P+K + GQLT +R
Sbjct: 1078 VDRSFLLQAVTHASYYRNRLTDCYQRLEFLGDAVIDYLVTRYLY-ELPRKFNPGQLTDLR 1136

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
              +V+N       +  GL    +     PS ++A G
Sbjct: 1137 SSLVNNTFFASLVVKYGLHGCFK--HCNPSLFSAIG 1170


>gi|156371137|ref|XP_001628622.1| predicted protein [Nematostella vectensis]
 gi|156215603|gb|EDO36559.1| predicted protein [Nematostella vectensis]
          Length = 261

 Score =  147 bits (370), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 147/254 (57%), Gaps = 20/254 (7%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRP---SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            +E +L   F+DR +L++A+TH S P   SS  S Y++LEF+GDA+LD+L+T+H+   +  
Sbjct: 9    VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 68

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV--LEE----- 1704
            L PG +TDLR+A VNN + A + ++   H H+R  S AL + +R FV+ +  +EE     
Sbjct: 69   LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEKETRP 128

Query: 1705 ---LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPE 1761
               LL    +  G    + PKVLGD+ E++ GA+++D GRD  + W V  PLL P++   
Sbjct: 129  DQLLLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPIIEHY 188

Query: 1762 T--LPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQ--VGVAQNPQKKMAQK 1817
            +  LP+ P R+L E     A       +  G+ A  E+ + G    +G  +N Q  +A+ 
Sbjct: 189  SVHLPISPTRQLVEMMPGAATFTCLSQNVIGHHA-CELVVKGYGRFMGTGRNAQ--IARS 245

Query: 1818 LAARNALAVLKEKE 1831
             AA++ALA +K K+
Sbjct: 246  TAAQHALARIKSKQ 259



 Score = 47.8 bits (112), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 30/172 (17%)

Query: 1387 ILEALTAASCQETFC-----YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +L+ALT  S    +      YE+ E LGDA L ++V+R +  ++P+   G +T +R  +V
Sbjct: 23   LLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPRLSPGAITDLRSAVV 82

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N  L    + +    ++++   A           +F    +      F +  S  E+K 
Sbjct: 83   NNYSLACLTIQRDFHKHMRSMSMA-----------LFKVVRR------FVRRLSEIEEK- 124

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
                   E   D +    +E       +   K L D+ EAL+G  YV+ G+D
Sbjct: 125  -------ETRPDQLLLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCGRD 169


>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
            antarctica T-34]
          Length = 1764

 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 227/564 (40%), Gaps = 98/564 (17%)

Query: 1233 GDLEGRIVTAAH---SGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYG- 1288
            G L+ R++T  H   S   +  + +R+++TA S  P K G     E  +Y   +  KY  
Sbjct: 1129 GSLQNRVLTRQHGYASNALYIFQDVRHDLTAISPLPPKTGTETVDETQTYLSQHLTKYAR 1188

Query: 1289 -------VELI--FKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPP 1339
                     L+      PL+    +    NLL+     S         I+ + Y VF   
Sbjct: 1189 RVNADEAAALVTQLASTPLVAVTKLGKLTNLLTAPSRGSRAAATPVRFIIPRFYRVF--- 1245

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKILEALTAASCQE 1398
                  PL   ++     LPSI+ R + +LLA Q  D + +  +    +LEAL + + + 
Sbjct: 1246 ------PLRSDVLSSVLALPSILARYDQLLLASQCNDTLFSGALEVDLVLEALASPAARC 1299

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
               YER E LGD +LK V +   F     + E +L    + +++N+ L +          
Sbjct: 1300 GLDYERLEFLGDTFLKLVATCHTFTTQLGRTEAELHLANKGILTNVRLLR---------- 1349

Query: 1459 IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
             +A R    RWA                  LF      A  K  T           ++ G
Sbjct: 1350 -EARRLQLGRWA------------------LFASADFRA--KRCTAPMSGWMGGALLQAG 1388

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSR 1578
             +E       V+  KTL DVVEALIG   + GG DAA H+ + + +              
Sbjct: 1389 PVEVGPGETDVIREKTLPDVVEALIGAALLGGGTDAALHVCRVLTL-------------- 1434

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRG-------------------------LLVEAI 1613
               +PES+ R  DF+ L   LK+    +G                         L +EA 
Sbjct: 1435 ---IPESIRRLDDFNTLLQELKLTSVTQGWERRVDRSGLDHLQSLFGHVYRYPHLGLEAF 1491

Query: 1614 THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            TH S  +S +  YQRLEF+GDA LD  I +++F ++ +L PG LT L+    +N   A +
Sbjct: 1492 THPSLLASVLPSYQRLEFLGDAWLDLYIVRYIFSAHPDLSPGELTALKGMLASNSTLAAL 1551

Query: 1674 AVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAG 1733
              +  LH ++   S  L   +  +   +  E    G   +   D   PK L D VE+   
Sbjct: 1552 GHRLGLHRYVASNSEVLVSTLSAYSTAM--EGAGEGTAYWHKVDVGVPKALADAVEASFA 1609

Query: 1734 AIFLDSGRDTSVVWQVFQPLLDPM 1757
            +I +DS  D S+   VF  L  P 
Sbjct: 1610 SIVVDSSFDPSMAQGVFDRLFVPF 1633



 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 129/232 (55%), Gaps = 21/232 (9%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR----QNKKMLAVFLVPK 360
           R YQL++ + AK  N +  L+TG+GKTLI+VLL++ I +          K+ ++ FLV  
Sbjct: 257 RSYQLELAQIAKSGNVLVCLDTGSGKTLISVLLLQHIHSQPAPPPYPATKRKVSFFLVNL 316

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQ----------DFWDAQRWQREFDTKQVLVMTA 410
           VPLV+QQ+ VI   +   VG   GE+ +          D W A +W     + QV+V TA
Sbjct: 317 VPLVHQQSSVIAGNSDLAVGKLYGELKEATRGRNKLTVDNWHAPQWAALLQSHQVIVATA 376

Query: 411 QILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
           Q  L+ L H  IKM  +NL+I DE HHA+K HP+  +M ++Y     ++RP +FGMTASP
Sbjct: 377 QCFLDALIHGFIKMSDLNLIIFDEVHHALKNHPFFRIM-KYYRLAPADQRPKIFGMTASP 435

Query: 471 VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRK--ELEKHVPMPSEVVVEY 520
           +  +  S     A     L+S +D+ + T+      +L+K    P E+VVE+
Sbjct: 436 IFTR--SGMFHEAAHY--LQSIMDARIHTVSKAALDDLDKVKQKPDELVVEF 483



 Score =  121 bits (304), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 24/304 (7%)

Query: 703 TPKVQSLIKILLKYQ-HTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN- 760
           +PK+  L+++L  ++    +F AI+FVER   A +L K+    P L F+    L+GH+N 
Sbjct: 647 SPKLLRLVELLQCFEPDAANFCAIVFVERRQTATLLVKLIKRAPGLGFIHPEFLLGHDNG 706

Query: 761 -----SQEMRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                +  M      + + +FR    T LLVATS+AEEGLDI+  N+VIRFDL    +++
Sbjct: 707 SAAGGAPAMDWHDQVQVLNRFRRRAPTNLLVATSIAEEGLDIQAANLVIRFDLFNRHISF 766

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERT-------DLSH 865
           +QSRGRAR  GS +ILM E GN  HA  + NA ++E    K  +AI  +       D   
Sbjct: 767 LQSRGRARARGSRFILMAESGNADHAKVILNAFDTEARRSKWLDAITESGGDGGDADAVL 826

Query: 866 LKDTSRLISV-----DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF 920
             +  + + +     DA P       +TGA +    A  L+  Y + L S+        +
Sbjct: 827 CDEWQQRLHIEPQDPDAEPAI--HEPTTGARLYAEDAPSLVAHYAATLHSEHLKDAVLAY 884

Query: 921 IMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
            M+  +  GG   +SC L+LP  A    ++   CSS + A++   L AC++L ++G   +
Sbjct: 885 RMQCTDVLGGTPAFSCTLELPSTAAVRSVDSGPCSSKKRAKRMAALRACQQLRQLGELDE 944

Query: 981 MLLP 984
            L+P
Sbjct: 945 WLMP 948


>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
            77-13-4]
 gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
            77-13-4]
          Length = 1452

 Score =  146 bits (369), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 256/629 (40%), Gaps = 117/629 (18%)

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYY 1334
            EYS+ + YY  +  V+   + QP+++ + +S  +N L          E + +E ++   +
Sbjct: 868  EYSN-SLYYNTRLKVKWR-EDQPVVKAQMLSLRRNYLD---------EFQVDEEVNNDCF 916

Query: 1335 VFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAA 1394
            V L P    + P+P  +       P+I+ R+++ L+ +     ++ P+P    LEA+T  
Sbjct: 917  VILEP--LRVSPIPLDVAFMVMAFPAIIHRIDAALITLDACAMLDLPIPPVLALEAMTKD 974

Query: 1395 SC--------QETF------CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            S         Q  F       YER E LGD++LK   +  LF   P+  E      R  +
Sbjct: 975  SDNSGEHDEEQVNFQPGMGSNYERLEFLGDSFLKMATTISLFTLIPESDECGYHVERMIL 1034

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            + N  L+ +A+ + L  YI++  F    W                               
Sbjct: 1035 ICNQNLFNHAVDRKLHEYIRSKAFDRRSW------------------------------- 1063

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
                     Y D  ++ G+       +  L+ K++ADV EALIG  Y+ G   + +  +K
Sbjct: 1064 ---------YPDLPLKKGKAPKTEMRHN-LADKSIADVCEALIGAAYLSGKGGSMDLAVK 1113

Query: 1561 WIGIQVESDPEEV-------GCPSRPACVPESV----LRSVDFHALEDALKIKFKDRGLL 1609
             +   V+S   ++            PA           R VD   + DA+  +FK   LL
Sbjct: 1114 AVTRMVKSKNHKMEKFEDYFAAFKMPAWQQAEANVNQRRLVD--CVADAVGYRFKWPALL 1171

Query: 1610 VEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNEN 1669
              A  H S P   V  YQRLEF+GDA+LD  I  +LF  +    P  LT+ + A  +N+ 
Sbjct: 1172 RSAFKHPSWPYDPVPNYQRLEFLGDALLDMAIVDNLFQRFPQADPQWLTEHKMAMASNQF 1231

Query: 1670 FARVAVKHKLHVHLRHGSSALDRQIRDFVK--EVLEELLKPGFNS--------FGLGDCK 1719
               + VK  LH HL   +S+L  QI  +    E+ EE  +    +        F L    
Sbjct: 1232 LGCLCVKLDLHKHLTSTTSSLIGQISSYASELELAEEDARQEAKANKTAMRKDFWLRASA 1291

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQER 1774
             PK   D++E++ GA+F+D+  D +VV   F   ++P      L       HPV  L ++
Sbjct: 1292 PPKAFADVMEALVGAMFVDAKYDYTVVRNFFTRFIEPYFEDMALYDSFANKHPVTYLSKK 1351

Query: 1775 CQQQAEGLEYKASRSGNLATVEVYIDGVQ----VGVAQNPQKKMAQKLA----------A 1820
             QQ      ++ S       VE  I  +     V V    QK +A   A          A
Sbjct: 1352 MQQDLGCTNWRVSAENVPCGVEEGIAALTESDVVAVFMVHQKVVANATAKSGRYAKIAVA 1411

Query: 1821 RNALAVLKEKETAEAKEKGDENGKKRKNG 1849
            + ALA+L E E       GD    KR  G
Sbjct: 1412 KRALAMLDEHE-------GDFETMKRALG 1433



 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 126/249 (50%), Gaps = 17/249 (6%)

Query: 264 LGSWEADHNR-----AGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKK 318
           L  W + + R     +    N  N +    + K SE+++ +     R YQ+++ E+AK+K
Sbjct: 16  LKEWVSKNQREVTRSSAAALNDPNFQSVAHLIKTSESRKII--ATPREYQIELFERAKQK 73

Query: 319 NTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPKVPLVYQQAEVIREQ 374
           NTI  L TG GKTLIA LL+R        D      K +A FLV KV L YQQ  V+   
Sbjct: 74  NTIVVLPTGTGKTLIAALLLRHYLEQEMEDRAIGKPKKVAFFLVEKVALCYQQYAVLNCN 133

Query: 375 TG-YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILD 433
            G + +  + G M       Q W ++F    V+V TAQIL++ L    IKM  INLLI D
Sbjct: 134 LGEHPITKFWGNMKGMVRKKQYWDQQFSENMVVVCTAQILVDCLNDGFIKMSQINLLIFD 193

Query: 434 ECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKL 493
           E HHA K HPY+ +M   Y     E RP + GMTASPV+    S   D       LE+ L
Sbjct: 194 EAHHAKKDHPYARIMRNHYIRYQGE-RPRILGMTASPVD----SQTKDVKAAALELETFL 248

Query: 494 DSVVCTIKD 502
            S + T+ +
Sbjct: 249 CSEIATVSN 257



 Score =  110 bits (276), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 22/283 (7%)

Query: 701 KVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAE----LPSL-SFVKSAS 754
           +++PK++ L +ILL  +      R I+FVE+   A +L  ++ +    +P + ++    S
Sbjct: 361 ELSPKMKKLHEILLHAFTRDSTKRCIVFVEKRHTAWLLSDLYQQQGMRIPGMVAYYMIGS 420

Query: 755 LIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
               +    M       T+ KF+ G +  L AT+VAEEG+D+  C++VIRFDL  +V+ Y
Sbjct: 421 QSASSTHSNMSHRDQVVTLQKFKRGSINCLFATTVAEEGIDVPDCDLVIRFDLYNSVIQY 480

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS 874
           +QS+GRAR+  S YI M+E GN+     L+ A      L+K  +       L+D      
Sbjct: 481 LQSKGRARQSNSRYITMLEEGNMGQLRSLKQAERDSTALQKFCLSLPADRKLEDD----V 536

Query: 875 VDAVPG-----TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG 929
           VDAV        VY++ STGA ++   ++ ++  Y + +     S  + EF + +     
Sbjct: 537 VDAVQDELLVQKVYEIPSTGARLTFAHSMDVLSKYAASITPGVSS--KVEFTVTKL---- 590

Query: 930 GPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
           GP ++   + LP  +P + + G    S  LA+ +    AC KL
Sbjct: 591 GP-KFIADVILPDASPLKAMSGFPQRSKLLAKYSAAFEACVKL 632


>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
            Full=Endoribonuclease dcl2; Includes: RecName:
            Full=ATP-dependent helicase dcl2
          Length = 1377

 Score =  145 bits (365), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 228/545 (41%), Gaps = 119/545 (21%)

Query: 1284 KQKYGVELIFKKQPLIRGRGVSY----CKNLLSPRFEHSEEQEGEGEEILDKTYYV---- 1335
            + +Y   L+FKK  +     V+     C +L   R     +   +GE +           
Sbjct: 820  RTRYDEPLLFKKWVVTEDGDVAVVEMECHSLPKRRNLLQRQTLAQGEIVTTAVDTAPAKA 879

Query: 1336 -FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEAL 1391
              +P   C I  LP +       + +I+ R+E+ L+A +L + I   V  S    ++ A+
Sbjct: 880  RIIPATACTIDRLPFTDTIFGLFISAILDRLEATLIATRLCETILQDVQFSSTRHVITAI 939

Query: 1392 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            +A + Q    Y+R E  GD+ LK+ VS  L++++P   EG L+  R ++V N  L + AL
Sbjct: 940  SAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAAL 999

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
              GL ++I   RF P +W AP +                  EK+V               
Sbjct: 1000 DVGLDAFILTRRFTPRKWTAPLI-----------------SEKAV--------------- 1027

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE 1571
                   E+ G     R LSSK LADVVE+LIG  Y++GG+  A+  ++ +  ++E    
Sbjct: 1028 -------EVAGK----RPLSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEI--- 1073

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALK----IKFKDRGLLVEAITHAS-RPSSGVSCY 1626
               CP  P  V ES       H + D+LK      F +  LLVEA+TH S R  +    Y
Sbjct: 1074 ---CPITPPPVHESAP-----HVMNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSY 1125

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFA------RVAVKH--- 1677
            QRLEF+GDAVLD ++   +       P G +T ++ A  N    A       VA +H   
Sbjct: 1126 QRLEFLGDAVLDMVVVHAMAHHAVECPQGEMTMIKHALTNANLLAFFCMEFVVAQEHTDV 1185

Query: 1678 ------------------KLHVHLRHGSSALD------------RQIRDFVKEVLEELLK 1707
                              +L   +R  S ALD             Q+R  +   L    +
Sbjct: 1186 DAVPAAGGFALRSEQKPIELWRFMR--SEALDLNNARETVLHRHSQLRAEIVHALHHGAQ 1243

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPET 1762
              + +  L    A K   DIVESI GAIF+DS  D  V     +     P L  ++    
Sbjct: 1244 YPWQA--LSQLNADKFFSDIVESILGAIFVDSRGDLDVCAMFVERIGLLPYLRRILADRV 1301

Query: 1763 LPMHP 1767
              MHP
Sbjct: 1302 DVMHP 1306



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 33/300 (11%)

Query: 703 TPKVQSLIKILLKYQHTED--FRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHN 759
           +PK+++LI  L     T+D  F  +IF ++     VL  + +  P +    + A+ +G +
Sbjct: 365 SPKLEALISFL---SSTDDSTFSGLIFAKQRATVTVLATLLSVHPLTKDRFRCAAFVGWS 421

Query: 760 NSQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
                     E+ + QMQ +T+++FR G+  L+VAT V EEG+DI  C+VVI +D    V
Sbjct: 422 GGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANV 481

Query: 812 LAYIQSRGRARKPGSDYILMI----ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
            +++Q RGRAR+  S + ++     E  +L     L  A    E  + +  +R +   L+
Sbjct: 482 KSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEAMI--EAYQDDERKRCEALALE 539

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
             + +++        ++VESTGAV++ ++AV  +H +CS LP   Y   RPE   E    
Sbjct: 540 TMAEVVT------ERFEVESTGAVLTADTAVARLHHFCSILPQQPYVDNRPELSFEY--- 590

Query: 928 PGGPTEYSCKLQLP-CNAP-FEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             G        +LP C  P   +  G    ++ R A +      CK+L+E G   D LLP
Sbjct: 591 -DGTGRRRGTFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLLP 649



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 17/216 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++ E + ++N I  ++TG+GKT +A+L    I N+L+ +  + L  FL P V L 
Sbjct: 17  RNYQTEMFEASLQENIIVAMDTGSGKTHVALL---RIMNELETRRPQKLIWFLAPTVALC 73

Query: 365 YQQAEVIREQTGYVVGH-YCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
           +QQ +VI +    V      G+   + W  Q  W       QV+V T  +L + + +  +
Sbjct: 74  FQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVLADAMSNGFV 133

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTASPVNLKGVSS 478
           ++  + LLI DE HH +++HP + +M +FYH T      +  P + G+TASPV     +S
Sbjct: 134 RVSQLGLLIFDEAHHCMRRHPANRIMQDFYHPTLVKQGPDAVPGILGLTASPV--VRTNS 191

Query: 479 QVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMP 513
           Q     ++  +ES ++++  T +  R+EL  H   P
Sbjct: 192 Q-----ELSMIESNMNAICKTPRAHRQELLTHTHRP 222


>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
 gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
          Length = 1490

 Score =  144 bits (363), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 201/448 (44%), Gaps = 90/448 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEALTA 1393
            +P     I  LP    + A  +PS++  +   LLA +L   I  P+    I   L A+TA
Sbjct: 986  IPARQSCISMLPVGFAKFALFIPSLIHTIGRYLLAEELSKTILSPIGFQNIQLVLTAITA 1045

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S +E   Y+R E LGD+ LK   S  L  ++P  HEG L++ +  +VSN  L++ A+  
Sbjct: 1046 TSAREDTNYQRLEFLGDSALKLHASMQLLAEHPLWHEGILSKKKDSIVSNSRLWKAAVDT 1105

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W      P+++                            + Y D+
Sbjct: 1106 GLDQFILTTCFTGAKWR-----PLYN----------------------------STYTDN 1132

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
              + GE      S R LS+KTLADVVE+LIGV  ++GG++     ++    ++   P   
Sbjct: 1133 AGKIGE-----KSTRKLSTKTLADVVESLIGVAIIDGGENKVLRCLELFLPEINWLPSGE 1187

Query: 1572 --EVGCPSRPAC---VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCY 1626
              E+   S P      P  +L  +     E  +   F  + LL  +++H S P SG++ Y
Sbjct: 1188 RIEILYDSAPDFNDDCPRDILSKI-----EPLIDYSFTKKALLAASLSHPSNPISGMT-Y 1241

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH--------- 1677
            QRLEF+GD++LD+++T+ LF     +P   +  +R A VN +  A + +           
Sbjct: 1242 QRLEFLGDSILDNIVTRALFRCKKEIPHQDMHLIRTALVNADFLAFLCMNTSTDETREDV 1301

Query: 1678 -----------------KLHVHLRHGSS-------ALDRQIRDFVKEVLEELLKPG--FN 1711
                              L  ++ H S+       A+ R   + +++ +E  L+ G  + 
Sbjct: 1302 CVSPTGEVEVTSSTRQVSLWQYMSHSSTDIVETQQAMARTFEE-LRDQIENALRSGARYP 1360

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
               L    APK   DI+ESI GAIF+DS
Sbjct: 1361 WTLLSTLNAPKFFSDIIESILGAIFIDS 1388



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 174/721 (24%), Positives = 307/721 (42%), Gaps = 125/721 (17%)

Query: 310 DVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAE 369
           D L      NTI       G    A+L IR    +L+R +   L  FL P+VPL  QQ  
Sbjct: 120 DQLNDQAPSNTI-------GHIYSAILRIR---YELERCSNDKLVWFLAPRVPLAEQQYR 169

Query: 370 VIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSIIKMEAI 427
            I EQ   Y      G    + W  Q+ W       +++V T QILL++L +  I +  I
Sbjct: 170 AISEQLPAYQTKILTGADNLERWSTQQIWDAFLLNTRIVVSTPQILLDVLSNGFITLRRI 229

Query: 428 NLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKIC 487
            LL+ DE             +SE          PS+ G+TASP + K +   +   ++  
Sbjct: 230 ALLVFDEDQ-----------LSE------TNDLPSILGLTASPTS-KLIEDSLSLLMESR 271

Query: 488 NLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASL-WSLHEQLKQMEVAVEEAAQ 545
            LE  LD+   T    R+E+ ++V +P    + Y K + +  ++  +   M   ++  + 
Sbjct: 272 QLEQNLDAFCKTPAIHREEMMQYVHIPELRRISYQKDSIIPHNMEMKFLHMLDDIDIESD 331

Query: 546 SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAY 605
              +R K    G  D+ + E+  +        ++     L +    I++  GELG W   
Sbjct: 332 PFFQRHK----GKTDSKSTEKCLRALA----RKTPCLDQLKRCFTKISHMYGELGHW--- 380

Query: 606 KVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFV 665
             + +F++ +    R                               +K AK+VD  + + 
Sbjct: 381 -ASSAFISEIYRRTR-------------------------------EKRAKLVD--HSWS 406

Query: 666 EGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK---VTPKVQSLIKILLKYQHTEDF 722
           E   ++        S + +  E V  I+G    +     V+ KV+ LI  LL  + T   
Sbjct: 407 EWDRDD-------SSFMCNALEPVVAIMGERCWNSTPDAVSQKVEHLID-LLSSELTGSS 458

Query: 723 RAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN--------SQEMRTFQMQETIA 774
           R IIFVE+   A++L  + +  P L+ +KS   +G++         ++  +   M+ +IA
Sbjct: 459 RGIIFVEQRATAVMLSHLISHYPELTHIKSDYFLGNSAFSDRKADLTELSKPGDMKNSIA 518

Query: 775 KFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL---- 830
             + G+  LLVATSV EEG+D+  C++V+ FD  K + +++Q RGRARK  S +++    
Sbjct: 519 DLKSGKKNLLVATSVLEEGIDVSACDLVVCFDPPKQLRSFVQRRGRARKKSSKFVIFYAE 578

Query: 831 --------------MIERGNLSHATFLRNARNSEETLRKEAIE-RTDLSHLKDTSRLISV 875
                         +++   LS+  F+   R  ++    E    R + +    T  L+  
Sbjct: 579 DDTATYKDWEAMEDIMKERYLSNKEFIERLREEDDEEEVEYESLRIESTGYGVTPGLVLW 638

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
           D +    Y V    A+++L +A   +  +CS +P + ++  +P+FI+    K G     +
Sbjct: 639 DCLLTIYYSVR---ALLTLENARAHLSHFCSTIPCE-FTDTQPDFII---SKTGIKDMLT 691

Query: 936 CKLQLPC--NAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
            K+ LP   +  F + EG       ++A++     A  +L++ G   D L+P+      +
Sbjct: 692 AKVLLPTVLDLQFREFEGIQAWKREKMAKRDAAFQAYLQLYKAGLVNDHLMPEHCRTTDE 751

Query: 993 E 993
           E
Sbjct: 752 E 752


>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
          Length = 1732

 Score =  144 bits (362), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 206/440 (46%), Gaps = 54/440 (12%)

Query: 1381 PVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            P P   I++ALT  + QE F  ER ELLGD++L+ V +  +  + P     +L  +RQ  
Sbjct: 1193 PSPCD-IMKALTTKASQEVFDLERLELLGDSFLQIVATFSVLDRNPNMSISELNVLRQYE 1251

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAP-GVLPVFDED-------------TKDGD 1486
            V+N  L   A  K L S ++A  F  +    P G  P+  E+               D D
Sbjct: 1252 VNNRHLLCRAHDKKLTSVLEAYPFKATHNFLPLGCRPIPHEEKLLRRDILCLLVQCFDYD 1311

Query: 1487 SSLFDQEKSVAE--------DKLGTDKNYNEYE-------DDDMEDGELEGDSSSYRVLS 1531
              L  + K++          +K   ++  N  E        DD      +    S+    
Sbjct: 1312 EDLTPKLKNLRHCKFIRRLLEKFAREQPSNLQEMAKYAFLQDDQLPLRHDVPVRSFHDFK 1371

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP-------SRPACVPE 1584
            +K   DVVEAL G Y  + G   A    +WIG+ +  D E            S    +P 
Sbjct: 1372 AKVGGDVVEALAGTYLEQCGPIGALRFFRWIGMDL-GDTESNNFLDAFKLDFSAAQNIPA 1430

Query: 1585 SVLRSVDF--HALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLI 1641
              L+S  +    +E  +   FK +GL+++AITH S R       Y RL F+G+AV D+L+
Sbjct: 1431 ECLKSYQYLIEKVEKQIDFTFKSKGLVLQAITHHSCRDHLLTEDYNRLAFIGEAVADYLL 1490

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            T +++   +NL PG+L+DLR+A +NN+  A   V+ +LH  L + +S L   IR +++ +
Sbjct: 1491 TLYIYGLSSNLDPGQLSDLRSALINNQVTAYAVVRAELHTVLLYTNSKLFSAIRKYLENI 1550

Query: 1702 LEELLKPGFNSFGLGD--------CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
             +  L+   N+  LGD         + P+ L  I++SI GA+F+DSG+    VW++   +
Sbjct: 1551 DDIGLR--LNTV-LGDWETDDAEEAEVPRPLARILQSILGAVFIDSGKSFESVWRILVRI 1607

Query: 1754 L--DPMVTPETLPMHPVREL 1771
            +  +  +    +P+ P  EL
Sbjct: 1608 MGHEIALFSRNVPIPPTTEL 1627



 Score =  140 bits (353), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 14/202 (6%)

Query: 298 KMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ--------RQN 349
           ++ EEQAR YQ+++ E AKK NTI  L TG GKT I+VLLI+ + + +         R  
Sbjct: 109 QLIEEQARSYQVELFEYAKKHNTIVCLGTGTGKTFISVLLIKYLEHQVTGPWLDESGRTP 168

Query: 350 KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMT 409
                +FL P VPLV QQ+ V+       VG Y G M  D W ++ W +E     VLVMT
Sbjct: 169 VGKRTIFLAPNVPLVEQQSAVLACHMTVKVGTYVGSMNTDRWTSEHWNKELQEHGVLVMT 228

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTAS 469
            ++    + H  I +E INLL+LDECH A    PY  +M E Y   +   RP + G+TAS
Sbjct: 229 PEVCRIAVDHGFIPLENINLLVLDECHRATGVDPYVKIM-ENYKNLNANDRPRILGLTAS 287

Query: 470 PVNLKGVSSQVDCAIKICNLES 491
            VN     +QV  +I+ C+  S
Sbjct: 288 VVN-----AQVPISIRSCDATS 304



 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 26/303 (8%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP---SLSFVKSASLIGH 758
           V PK+++L++I+ +++  +   A++FV+  + A VL      L      SFV  + ++G 
Sbjct: 451 VPPKMKTLLQIIKQFE-GKTLSAVVFVQERLVAYVLYIWMTHLSREDEFSFVNCSFIVGQ 509

Query: 759 NN----------SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           N           S +M     ++ +  FR G   L+ ATSV EEG+D+  CN+++RFD  
Sbjct: 510 NQGAYGRDVDQESMKMNAKAQKKVMRDFRGGIYNLMFATSVIEEGMDVPACNLIVRFDPP 569

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEA--IERTDLSHL 866
             V +Y QS+GRAR   S Y+L+     L+    L ++    E L      IER+  +  
Sbjct: 570 MDVRSYTQSKGRARAKPSLYVLLSSESELAKTKALLDSYQETEQLVMHCCGIERSPPTAS 629

Query: 867 KDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE 926
           +    L     +P   Y VE   A ++  SA+ +IH YC Q    +Y  + P F  E  E
Sbjct: 630 QSLEFLKEDPDLPP--YVVEHARARITAQSAISVIHSYCQQFMRMKYPNVFPFFDFE--E 685

Query: 927 KPGGPTEYSCKLQLPCNAPF-EKLEGPV--CSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             GG   Y C L +P   P  EK+        S   A+  V L  CK+LH  G  +D LL
Sbjct: 686 TAGG---YICTLTMPIVCPLREKVSNATRPFESKDKAKMFVALEMCKRLHACGELSDNLL 742

Query: 984 PDK 986
           P +
Sbjct: 743 PRR 745



 Score = 44.3 bits (103), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 8/138 (5%)

Query: 1247 KRFYV-ESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKY----GVELIFKKQPLIRG 1301
            +RFYV + I       +  P   GY G  +  S+ADY  +K       +L+   QP++  
Sbjct: 990  RRFYVTKPIATNEKGVALTPETTGYYGFNKSMSFADYALRKTLRAGPSKLLKAHQPVLTV 1049

Query: 1302 RGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSI 1361
                    +L  RFE+ +E+           Y   L P+ C +H +  SL R    +PSI
Sbjct: 1050 EHAHKRLQMLYSRFENQQERRQNYVSDFGTKY---LLPQFCAVHSIKASLWRKICSIPSI 1106

Query: 1362 MRRVESMLLAIQLKDKIN 1379
            + R+  +L A  ++ +I+
Sbjct: 1107 LYRLNRLLTAETIRHEIS 1124


>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1416

 Score =  144 bits (362), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 115/205 (56%), Gaps = 15/205 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ-------NKKMLAVFL 357
           R YQ+D+ E+AK++NTI  L+TG+GKTLIA LL+R I   LQR+       +K   A FL
Sbjct: 3   REYQVDLYERAKQENTIVVLDTGSGKTLIAALLMRHI---LQRELQYRADGHKHQYAFFL 59

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           V KV L +QQ  V+     + +G + GEM       + W ++F      V TAQILL++L
Sbjct: 60  VEKVALCFQQHAVLTCNLEFPIGKFYGEMTGIIRTQEYWDKQFAEHMAFVCTAQILLDLL 119

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
               I M  INL++ DE HHA K HPY+ ++ + Y     E RP + GMTASPV+    +
Sbjct: 120 ACGFISMSQINLIVFDEAHHAKKSHPYARIIKDHYLRAGNE-RPRILGMTASPVD----A 174

Query: 478 SQVDCAIKICNLESKLDSVVCTIKD 502
              D       LES L S + TI D
Sbjct: 175 LTRDVRYAAAELESMLCSKIATITD 199



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 209/520 (40%), Gaps = 90/520 (17%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++    +   +N L   F      +G+G      T Y+ L P    + P+    V  A
Sbjct: 857  QPVVNAELLPIRRNFLDEFFV---TDDGDG------TCYIILEP--LRVSPIYIDAVAMA 905

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
              LP +M RV+S+L+A +    +   + +   LEA+T  S         Q  F       
Sbjct: 906  LVLPVVMYRVDSVLIAQEACSLVGLTIRSDLALEAVTKDSFNTEEHGEHQVDFQPGMGRN 965

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   +  +F  +P   E +    R  M+ N  L+++A+ KG+ +YI+ 
Sbjct: 966  YERLEFLGDTFLKMATTISVFTLFPTADEFEYHVTRMVMLCNQNLFKHAVEKGMPAYIRT 1025

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W    +        K G ++                                 
Sbjct: 1026 KAFDRRTWYPSNM------TLKRGKAA--------------------------------- 1046

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV-------ESDPEEVG 1574
              + S   LS K++ADV EALIG  Y+       +  +K +   V        S  +   
Sbjct: 1047 -KTESKHCLSHKSIADVCEALIGAAYMSSSPGDMDMAVKAVAAMVCSINHTMTSYKDYFA 1105

Query: 1575 CPSRPACVPE--SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEF 1631
              + P    +  +  + +    + +    +FK   L   A  H S    + +  YQRLEF
Sbjct: 1106 TFTAPKWYSQQATAAQRLTVDKVAEITGYRFKAAPLARSAFRHPSYVFENNIRDYQRLEF 1165

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD +LD  I   LF  +    P  LT+ + A V+N+    + VK  LH H+   +S+L 
Sbjct: 1166 LGDGLLDMAIVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSSLL 1225

Query: 1692 RQIRDF------VKEVLEELLKPGFNS----FGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
              I  +       +E   + L+    S    F +   + PKVL D+VE++ GA+F+DS  
Sbjct: 1226 GDIGRYAAQLEQAEETARQTLRAEAESIPQNFWVDVPQPPKVLADVVEALVGAMFVDSEY 1285

Query: 1742 DTSVVWQVF----QPLLDPMVTPETLPM-HPVRELQERCQ 1776
              SVV   F    QP  + M    +    HPV  L  + +
Sbjct: 1286 SFSVVLDFFTKFIQPYFEDMALYSSFASNHPVTTLAHKLE 1325



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 26/300 (8%)

Query: 703 TPKVQSLIKILLK-----YQHTEDFRAIIFVERVVAALVLPKVFAE----LPSLSFVKSA 753
           +P++ S +K+L +     +   +  R I+FV+    A +L  +F +    +P ++     
Sbjct: 322 SPELSSKVKLLHEVLEDAFCKRQTKRCIVFVQARSTAFILADLFQQPGMLIPGMTV---G 378

Query: 754 SLIGHNNSQEMRTFQMQE----TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
            +IG  ++     +        ++ KFR G    L ATSVAEEG+D+ +C+V++RFDL  
Sbjct: 379 YMIGSQSTSSSAAYMSYREQIVSLQKFRYGETNCLFATSVAEEGIDVPECDVIVRFDLYS 438

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD- 868
           + + YIQS+GRAR+  S YI M+E GNL H   LR A      LR+      +   ++D 
Sbjct: 439 SAIQYIQSKGRARQKSSLYISMMEEGNLDHMRKLRRAVRDAHALRQFCSALPEDRKVQDF 498

Query: 869 ---TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP-EFIMER 924
                 L+S +      + +  TGA ++  +++ ++  + S  P++    + P E+I+  
Sbjct: 499 VITPELLVSHEQATQKTFAIAETGAQLTFITSLDVLAKFASSFPNEAEDGIMPLEYIVNT 558

Query: 925 HEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             K     ++  ++ LP  +P + + G    S +LA+ +    AC +L +    T  L P
Sbjct: 559 VGK-----KFIARVVLPEGSPIKTITGEAQQSKQLARCSAAFEACVRLIQKKYITGNLQP 613


>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1635

 Score =  143 bits (361), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 229/555 (41%), Gaps = 115/555 (20%)

Query: 1284 KQKYGVELIFKKQPLIRGRGVSY----CKNLLSPRFEHSEEQEGEGEEILDKTYYV---- 1335
            + +Y   L+FKK  +     V+     C +L   R     +   +GE +           
Sbjct: 794  RTRYDEPLLFKKWVVTEDGDVAVVEMECHSLPKRRNLLQRQTLAQGEIVTTAVDTAPAKA 853

Query: 1336 -FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEAL 1391
              +P   C I  LP +       + +I+ R+E+ L+A +L + I   V  S    ++ A+
Sbjct: 854  RIIPATACTIDRLPFTDTIFGLFISAILDRLEATLIATRLCETILQDVQFSSTRHVITAI 913

Query: 1392 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            +A + Q    Y+R E  GD+ LK+ VS  L++++P   EG L+  R ++V N  L + AL
Sbjct: 914  SAPTAQSPTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGRDEIVQNNRLARAAL 973

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
              GL ++I   RF P +W AP +                  EK+V               
Sbjct: 974  DVGLDAFILTRRFTPRKWTAPLI-----------------SEKAV--------------- 1001

Query: 1512 DDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE 1571
                   E+ G     R LSSK LADVVE+LIG  Y++GG+  A+  ++ +  ++E    
Sbjct: 1002 -------EVAGK----RPLSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEI--- 1047

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALK----IKFKDRGLLVEAITHAS-RPSSGVSCY 1626
               CP  P  V ES       H + D+LK      F +  LLVEA+TH S R  +    Y
Sbjct: 1048 ---CPITPPPVHESAP-----HVMNDSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSY 1099

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE------------------ 1668
            QRLEF+GDAVLD ++   +       P G +T ++ A  N                    
Sbjct: 1100 QRLEFLGDAVLDMVVVHAMAHHAVECPQGEMTMIKHALTNANLLAFFCMEFVVAQEHTDV 1159

Query: 1669 -------NFARVAVKHKLHVHLRHGSSALD------------RQIRDFVKEVLEELLKPG 1709
                    FA  + +  + +     S ALD             Q+R  +   L    +  
Sbjct: 1160 DAVPAAGGFALRSEQKPIELWRFMRSEALDLNNARETVLHRHSQLRAEIVHALHHGAQYP 1219

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLP 1764
            + +  L    A K   DIVESI GAIF+DS  D  V     +     P L  ++      
Sbjct: 1220 WQA--LSQLNADKFFSDIVESILGAIFVDSRGDLDVCAMFVERIGLLPYLRRILADRVDV 1277

Query: 1765 MHPVRELQERCQQQA 1779
            MHP    Q   + +A
Sbjct: 1278 MHPRHTAQRLSKGEA 1292



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 33/300 (11%)

Query: 703 TPKVQSLIKILLKYQHTED--FRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHN 759
           +PK+++LI  L     T+D  F  +IF ++     VL  + +  P +    + A+ +G +
Sbjct: 339 SPKLEALISFL---SSTDDSTFSGLIFAKQRATVTVLATLLSVHPLTKDRFRCAAFVGWS 395

Query: 760 NSQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
                     E+ + QMQ +T+++FR G+  L+VAT V EEG+DI  C+VVI +D    V
Sbjct: 396 GGGNRKDLIGELLSMQMQRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANV 455

Query: 812 LAYIQSRGRARKPGSDYILMI----ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
            +++Q RGRAR+  S + ++     E  +L     L  A    E  + +  +R +   L+
Sbjct: 456 KSFVQRRGRARRKESTFAILFSTDDELCDLRKWQLLEEAMI--EAYQDDERKRCEALALE 513

Query: 868 DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
             + +++        ++VESTGAV++ ++AV  +H +CS LP   Y   RPE   E    
Sbjct: 514 TMAEVVT------ERFEVESTGAVLTADTAVARLHHFCSILPQQPYVDNRPELSFEY--- 564

Query: 928 PGGPTEYSCKLQLP-CNAP-FEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             G        +LP C  P   +  G    ++ R A +      CK+L+E G   D LLP
Sbjct: 565 -DGTGRRRGTFKLPSCVHPDVRRTRGEKWWTTERAATKEAAFQTCKRLYEFGLLNDHLLP 623



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 14/176 (7%)

Query: 345 LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGH-YCGEMGQDFWDAQR-WQREFDT 402
           LQ      L  FL P V L +QQ +VI +    V      G+   + W  Q  W      
Sbjct: 28  LQENIIVALIWFLAPTVALCFQQHDVITKNLPAVKSRTLTGQDKVELWTEQAIWDAILKD 87

Query: 403 KQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKE 458
            QV+V T  +L + + +  +++  + LLI DE HH +++HP + +M +FYH T      +
Sbjct: 88  MQVVVSTHAVLADAMSNGFVRVSQLGLLIFDEAHHCMRRHPANRIMQDFYHPTLVKQGPD 147

Query: 459 KRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMP 513
             P + G+TASPV     +SQ     ++  +ES ++++  T +  R+EL  H   P
Sbjct: 148 AVPGILGLTASPV--VRTNSQ-----ELSMIESNMNAICKTPRAHRQELLTHTHRP 196


>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
            B]
          Length = 1511

 Score =  143 bits (361), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 243/537 (45%), Gaps = 76/537 (14%)

Query: 1325 GEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPA 1384
            GE   D+  Y+ + P+   +  +    ++ A  +PSIMR     L  + L+ ++    P 
Sbjct: 945  GEGFRDEDTYL-VHPQFATVDLVSRDDLQYALLIPSIMRWCSITLTVMSLRKQLLAKNPI 1003

Query: 1385 SKI-----LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
            S++       A TA   QE   Y+R E LGD  LK++ S  LF +YP  HEG L R +  
Sbjct: 1004 SEVPLALLTTATTAPVAQEQTNYQRLETLGDTVLKFLASLQLFAQYPLWHEGYLARRKDH 1063

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAED 1499
             VSN  L + AL K L  +I  +RF P +W      P++    ++  + + + E S++ +
Sbjct: 1064 AVSNARLAREALGKCLYRWIIRERFVPRKWK-----PLY--RVQEPSTIITNAEHSISSE 1116

Query: 1500 KLGTDKNYNEYEDD-DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL 1558
            +   D    E E + D E  +        + LS+K LADVVEALIG  Y  GG D A   
Sbjct: 1117 Q---DSIPVEAEQEVDTELQKKLKKKKQSQQLSTKVLADVVEALIGASYEHGGFDLAADC 1173

Query: 1559 MKWIGI-----QVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
                G+     +V     E+   + P   P + L     + +E  L   FK + LLVEA+
Sbjct: 1174 AALFGMGLTWKKVPDRISEILARTEPLEEPPTQL-----YLVERILNYTFKRKELLVEAL 1228

Query: 1614 THAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFS----YTNLPPGRLTDLRAAAVNNE 1668
            THAS         Y+RLEF+GD  LD ++T +L+ +    YT   PG +   + + VN+ 
Sbjct: 1229 THASYHGEHAAMSYERLEFLGDCALDMVVTDYLYHAPGKEYT---PGHMHLRKESLVNSH 1285

Query: 1669 NFARVAVK------------------------HKLHVH--LRHGS-SALDRQIRDFVK-- 1699
              A + ++                         ++H+H  L H S   L+ Q   F +  
Sbjct: 1286 FLAFICLRAFTTTEATSAHWTPKKGTSTTTEHQQIHLHQCLMHSSRRVLEDQHIAFSRFE 1345

Query: 1700 ---EVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL- 1753
                 +EE+L  G  +    L   +APK L D++ES+ GA++LD+      V +V + L 
Sbjct: 1346 KSGRKIEEMLLRGTMYPWAALTSLQAPKFLSDMLESLLGAVYLDTEGSLEAVREVMRVLG 1405

Query: 1754 ----LDPMVTPETLPMHPVRELQERCQQQA--EGLEYKASRSGNLATVEVYIDGVQV 1804
                ++ +V  +    HPV  L     QQ     ++Y+  +     +  V +DG ++
Sbjct: 1406 IIEVMEHIVMADVDVQHPVSRLAIWAAQQVPQHKIKYEIEKKDGNVSCAVVMDGEEI 1462



 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 125/223 (56%), Gaps = 22/223 (9%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ ++L+++ ++N +  ++TG+GKT IAVL ++    + +R+ +K ++ FL P V 
Sbjct: 21  RTRGYQKEMLDESLRRNIVIAMDTGSGKTHIAVLRMKL---EAERETQK-ISWFLAPTVA 76

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           LV QQ EVI       VG   G    + W DA  W++   T +++V T Q+LL+ L H+ 
Sbjct: 77  LVEQQREVIASAIPVSVGIISGASEPNQWKDANLWRKIIQTHRIMVTTPQVLLDALHHAY 136

Query: 422 IKM-EAINLLILDECHHAVKKHPYSLVMSEFYHT---------TSKEKRPSVFGMTASPV 471
           I +   I LL+ DE HHAVK HPY+ VMS FY           +    RP + G+TASPV
Sbjct: 137 IDLGRDIGLLVFDEAHHAVKVHPYNAVMSNFYFDLPPRDPTRGSQGRVRPMILGLTASPV 196

Query: 472 NLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMP 513
                   VD +  +  LE  LDSV+ + + ++ EL +HV  P
Sbjct: 197 ----YGGNVDKSFMV--LEKNLDSVIRSTRLNQDELAQHVHRP 233



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 135/301 (44%), Gaps = 50/301 (16%)

Query: 720 EDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQEMRTF----------Q 768
           E +  ++FV R    + L ++ +  P ++       L+G +NS +  +F           
Sbjct: 409 ETYSGLVFVTRRDTVVALSELLSRFPEVAQRFNIGCLLGSSNSFQRHSFLDITRSIPKDS 468

Query: 769 MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY 828
              T+  F+ G   L+++TSVAEEG+DI+ C  VIRFD    ++++ QSRGRAR+  S +
Sbjct: 469 QSATLRDFKIGDKNLIISTSVAEEGIDIQACGSVIRFDPPVNMVSWAQSRGRARRKKSTF 528

Query: 829 ILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPG-------- 880
           ILM E G + H              + E IE   ++   D SR    DA           
Sbjct: 529 ILMFEDGGVHHKL----------VQQWEDIEARMMALYNDVSR----DAASAPEPEDDED 574

Query: 881 ---TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG------- 930
                Y VESTGAV++L+SA   ++ +CS LPS  +    P + ++  E P G       
Sbjct: 575 DESEEYVVESTGAVLTLHSATSHLNHFCSVLPSAHHGDFLPVYDLDPPEFPEGWHVTREA 634

Query: 931 ----PTEYSCKLQLPCNAPFE-KLEGPVC--SSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
                  +  K+ LP   P + ++    C   S R A +     A   LH+ G   D LL
Sbjct: 635 VPIYTGPWGAKVTLPRALPKDLRVFSTECVYGSKRSAHRHAAFKAYVALHKAGLLNDNLL 694

Query: 984 P 984
           P
Sbjct: 695 P 695


>gi|300709179|ref|XP_002996756.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
 gi|239606080|gb|EEQ83085.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
          Length = 1131

 Score =  143 bits (360), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 200/459 (43%), Gaps = 65/459 (14%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H +E+E E           F   E+ ++  +  S+    +R        E + L  + 
Sbjct: 715  FSHKKEKEPE-----------FHACEIIYVTVVKKSIKSDYKRFVEYFNIFEILALTYEF 763

Query: 1375 KDKINYPVPASKILEALTAASC----QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            K  +N+ +  S +  + T        Q    YER E +GD+ LK+ VS+FLF +    + 
Sbjct: 764  KVNMNFSISHSNLAISFTLQDSLNGQQNDLGYERFEFIGDSVLKYSVSKFLFTE-CGYNL 822

Query: 1431 GQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPV-FDEDTKDGDS-- 1487
             +L   +  +V N  LY+      LQ Y   +R+    +  P +L + FD+   +  +  
Sbjct: 823  NKLVSTKDSLVCNDHLYRVGRQINLQKYFSLNRYTEHLFQPPAILDLEFDKSLIESLNLK 882

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
            +LF         KL + K   + +D ++E G+             K  AD+VE+LIGV+Y
Sbjct: 883  NLFQNNNQYNFVKLYSRK---QSQDTNLEKGK-------------KVYADIVESLIGVHY 926

Query: 1548 VEGGKDAANHLMKWIGI------QVESDPEEVGCPSRPA-CVPESVLRSVDFHALEDALK 1600
            +E G   A + +K IGI      +  S+      P+    C  E +L   +   +E  + 
Sbjct: 927  IEQGFQKAWNFIKSIGILENHGSKRHSNNFMTKTPNIILLCEYEGILPLANILKVEKIIN 986

Query: 1601 IKFKDRGLLVEAITHASRPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
              FK++G + +A+ H S   +  G   +Q+LE VGD  LD  ++ ++FF YT+  P  L 
Sbjct: 987  YTFKNKGYIEKAMIHPSYKDNIFGSERFQKLELVGDCFLDLKVSDYIFFKYTDADPETLH 1046

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
              R + VNN  FA +  K  L+       + L  Q RDF                   + 
Sbjct: 1047 THRKSLVNNHTFAMILFKSGLY---DFSFTGLSDQTRDF------------------NNN 1085

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            K  K  GDI E++AGA+ LDS  D  +    F+ +L  M
Sbjct: 1086 KVSKCYGDIFEALAGAVILDSEFDFEMTDMFFKTVLKLM 1124


>gi|340386816|ref|XP_003391904.1| PREDICTED: endoribonuclease Dicer-like, partial [Amphimedon
            queenslandica]
          Length = 380

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 68/312 (21%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP------------- 1576
            ++ K++AD VEALIG + V GG +    LMKW GI++      +  P             
Sbjct: 21   VTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTHSLLLA 80

Query: 1577 -----------SRPACVPESVLRSVD------------FHALEDALKIKFKDRGLLVEAI 1613
                       S PA    S L  +D              +++  ++  FK+  LL+EA+
Sbjct: 81   ESDSIFSSHFRSPPAPKLASKLAPLDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEAM 140

Query: 1614 THASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFAR 1672
            TH+S   + ++ CYQRLEF+GDA+LD+L+T H++ S ++  PGR+T+LR+A V N  FA 
Sbjct: 141  THSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRFAE 200

Query: 1673 VAVKHKLHVHLRHGSSALDRQIRDFVKEV-----------LEELLKPGFNSFGL------ 1715
            +A+   LH  L HGS  L   ++ + + +           LEE+     +S  +      
Sbjct: 201  LAISLNLHRSLCHGSPNLFNDMKKYAQSLKQREKEDRERKLEEMSINDDDSAQVIVESME 260

Query: 1716 ------------GDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT--PE 1761
                           + PK L D  E++AGA+F+DSG +   VW+ F P L+P+      
Sbjct: 261  DGDIDDDEDEDDDIIEPPKSLSDCFEALAGAVFIDSGMNLQTVWETFSPFLEPLFEKFKN 320

Query: 1762 TLPMHPVRELQE 1773
              P+ P+ EL +
Sbjct: 321  DPPLTPICELHK 332



 Score = 45.8 bits (107), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 29/178 (16%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            ++EA+T +S      T CY+R E LGDA L ++V+  ++        G++T +R  +V N
Sbjct: 136  LIEAMTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCN 195

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
                + A+S  L            R    G   +F+ D K    SL  +EK   E KL  
Sbjct: 196  SRFAELAISLNLH-----------RSLCHGSPNLFN-DMKKYAQSLKQREKEDRERKL-E 242

Query: 1504 DKNYNEYEDDDMEDGELEG----------DSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
            + + N   DDD     +E           D     +   K+L+D  EAL G  +++ G
Sbjct: 243  EMSIN---DDDSAQVIVESMEDGDIDDDEDEDDDIIEPPKSLSDCFEALAGAVFIDSG 297


>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
 gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control protein
            dcr1; AltName: Full=RNA interference pathway protein
            dcr1; Includes: RecName: Full=Endoribonuclease dcr1;
            Includes: RecName: Full=ATP-dependent helicase dcr1
 gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
          Length = 1374

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 191/406 (47%), Gaps = 50/406 (12%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCY 1402
            +I P+   L   A  +PSI+  +E++L+A    +            +ALT+A  Q  F Y
Sbjct: 870  YILPVSRHLKNSALLIPSILYHIENLLVASSFIEHFRLDCKIDTACQALTSAESQLNFDY 929

Query: 1403 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD 1462
            +R E  GD +LK   S  +FLK+P   E QL   R++++SN  LY+ A+   L  Y  + 
Sbjct: 930  DRLEFYGDCFLKLGASITVFLKFPDTQEYQLHFNRKKIISNCNLYKVAIDCELPKYALST 989

Query: 1463 RFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEG 1522
                  W   G    F + T D       Q+                             
Sbjct: 990  PLEIRHWCPYG----FQKSTSDKCRYAVLQK----------------------------- 1016

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKW--IGIQVESDPEEVGCPSRPA 1580
                   LS K +AD+VEA IG   ++ G D+A  + K   +G+   S+ +E        
Sbjct: 1017 -------LSVKRIADMVEASIGACLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLN 1069

Query: 1581 CVPESVLRSVDF---HALEDALKIKFKDRGLLVEAITHASRPSS-GV-SCYQRLEFVGDA 1635
               +S LR+V F     +E+ +   FK++ LL  A  H S  S  G+   YQ+LEF+GDA
Sbjct: 1070 TYADS-LRNVQFPYSSYIEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFLGDA 1128

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            VLD++I ++L+  Y N   G LTD ++  V N++ + +     LH +++H S+A+   I 
Sbjct: 1129 VLDYIIVQYLYKKYPNATSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCDAIF 1188

Query: 1696 DFVKEVLEELLKPGF-NSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
            ++ +E++E   +    N +   +  +PK + D +E++  AIFLDSG
Sbjct: 1189 EY-QELIEAFRETASENPWFWFEIDSPKFISDTLEAMICAIFLDSG 1233



 Score =  130 bits (328), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 151/294 (51%), Gaps = 25/294 (8%)

Query: 702 VTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           VT KV  L+++L   Y+ ++  R +IFVER   A  L  +F +  +L  +++ S IGH  
Sbjct: 341 VTDKVFKLLELLKATYRKSDSVRTVIFVERKATAFTL-SLFMKTLNLPNIRAHSFIGHGP 399

Query: 761 SQE---MRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
           S +     TF+ Q +T+ KF+ G+  +L+AT+VAEEG+D+  CN+VIRF++ +TV  Y+Q
Sbjct: 400 SDQGEFSMTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQ 459

Query: 817 SRGRARKPGSDYILMIERGN-LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           SRGRAR   S +++ +     L H   L   +N +  L       ++LS+      L+  
Sbjct: 460 SRGRARAMASKFLIFLNTEELLIHERILHEEKNLKFAL-------SELSNSNIFDSLVCE 512

Query: 876 D---AVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
           +        VY+V  TGA+++   AV L++ +C+ L  D Y+   P F  +    P    
Sbjct: 513 ERERVTDDIVYEVGETGALLTGLYAVSLLYNFCNTLSRDVYTRYYPTFTAQ----PCLSG 568

Query: 933 EYSCKLQLP--CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            Y  +++LP  C  P    +G    S+R A+Q      C  L  MG     L P
Sbjct: 569 WYCFEVELPKACKVP--AAQGSPAKSIRKAKQNAAFIMCLDLIRMGLIDKHLKP 620



 Score =  120 bits (300), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 17/227 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND---LQRQN--KKMLAVFLVP 359
           R YQ DV   A K+NT+  + TGAGKTL+AV LI+    +   +Q  N   K ++VFLV 
Sbjct: 13  RKYQQDVYNIASKQNTLLVMRTGAGKTLLAVKLIKQKLEEQILIQESNLEHKKISVFLVN 72

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           KVPLV+QQAE IR Q    VG + GE+  +    Q          V+V+TA +    L  
Sbjct: 73  KVPLVFQQAEYIRSQLPAKVGMFYGELSIEM-SEQLLTNIILKYNVIVITADLFYLFLAR 131

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH----TTSKE--KRPSVFGMTASPVNL 473
             + +  +NL+I DECHHA+    Y+ +M++FYH      SK+    P +FGMTASP   
Sbjct: 132 GFLSINDLNLIIFDECHHAIGNDAYARIMNDFYHRAKAVLSKKHFTLPRIFGMTASPFTG 191

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
           K    + +   ++   E   DS    + +  EL  +  +P E  V Y
Sbjct: 192 K----KGNLYHRLYQWEQLFDSKAHVVSEN-ELADYFCLPEESYVMY 233


>gi|76624102|ref|XP_580928.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1 [Bos
           taurus]
 gi|297477666|ref|XP_002689526.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Bos taurus]
 gi|296484925|tpg|DAA27040.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Bos taurus]
          Length = 942

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 254/578 (43%), Gaps = 67/578 (11%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQL++   A+K KNTI    TG GKT +++L+         +  K  + VF V +V
Sbjct: 240 KPRNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGRKGKVVVFAV-QV 298

Query: 362 PLVYQQAEVIRE---QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           PL  QQ  V  E   + GY V    GE      D    ++  +   ++++T QIL+N L+
Sbjct: 299 PLYEQQKSVFSEYFERFGYKVSGISGETA----DNISVEQIVENNDIIILTPQILVNSLK 354

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVNLK 474
              I  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V + 
Sbjct: 355 DGTIPSLSIFTLMIFDECHNTNKHHPYNMIMFHYLDQKLGGSSDSLPQVIGLTAS-VGVG 413

Query: 475 GVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
              +  +    IC L + LD+ VV T++D  +ELE+ V  P +   +             
Sbjct: 414 DAKNTAEATEYICKLCASLDTAVVTTVRDNLEELEEVVYKPQKFFRK------------- 460

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
                  VE       +R   Q M   +A AK    ++  V+           + +++  
Sbjct: 461 -------VESRTTDRFKRIISQLMAETEALAKSIFEELGTVTLEN--------LSRIQNR 505

Query: 593 NYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGA 649
           N+   +  QW         + A+Q      +Q+  K +ES + K + L    L    +  
Sbjct: 506 NFGTQKYEQW---------IIAVQKACMV-FQMPDKEEESRICKALFLYTSHLRKYNDAL 555

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDV-IIGAAVADGKVTPKVQ 707
           +  +DA++ D+ N       N    G + ++  +    E   + + G ++       K++
Sbjct: 556 IINEDARMKDALNYLKNFFKNVRAAGFDAIEQDLTQRFEEKLLELEGISMDPSNENAKLK 615

Query: 708 SLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQE 763
            L  IL  +Y    + R I+FV+       L     E P LSF+K   L G    N +  
Sbjct: 616 DLCFILQEEYHLNPETRTILFVKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMG 675

Query: 764 MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           M     +  +  FR  R + +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+RGR R
Sbjct: 676 MTLPAQKCALDAFRTNRDSKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 735

Query: 823 KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
             GS   L+    ++     L      +E +  E+I R
Sbjct: 736 ARGSKCFLLTSNADVIEKEKLNIC---QEKMMNESISR 770


>gi|440893954|gb|ELR46543.1| Putative ATP-dependent RNA helicase DDX58, partial [Bos grunniens
           mutus]
          Length = 927

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 246/555 (44%), Gaps = 64/555 (11%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQL++   A+K KNTI    TG GKT +++L+         +  K  + VF V +V
Sbjct: 240 KPRNYQLELALPAQKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGRKGKVVVFAV-QV 298

Query: 362 PLVYQQAEVIRE---QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           PL  QQ  V  E   + GY V    GE      D    ++  +   ++++T QIL+N L+
Sbjct: 299 PLYEQQKSVFSEHFERFGYKVSGISGETA----DNISVEQIVENNDIIILTPQILVNSLK 354

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVNLK 474
              I  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V + 
Sbjct: 355 DGTIPSLSIFTLMIFDECHNTNKHHPYNMIMFHYLDQKLGGSSDSLPQVLGLTAS-VGVG 413

Query: 475 GVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
              +  +    IC L + LD+ VV T++D  +ELE+ V  P +   +             
Sbjct: 414 DAKNTAEATEYICKLCASLDTAVVTTVRDNLEELEEVVYKPQKFFRK------------- 460

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
                  VE       +R   Q M   +A AK    ++  V+           + +++  
Sbjct: 461 -------VESRTTDRFKRIISQLMAETEALAKSIFEELGTVTLEN--------LSRIQNR 505

Query: 593 NYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGA 649
           N+   +  QW         + A+Q      +Q+  K +ES + K + L    L    +  
Sbjct: 506 NFGTQKYEQW---------IIAVQKACMV-FQMPDKEEESRICKALFLYTSHLRKYNDAL 555

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDV-IIGAAVADGKVTPKVQ 707
           +  +DA++ D+ N       N    G + ++  +    E   + + G ++       K++
Sbjct: 556 IINEDARMKDALNYLKNFFKNVRAAGFDAIEQDLTQRFEEKLLELEGISMDPSNENAKLK 615

Query: 708 SLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQE 763
            L  IL  +Y    + R I+FV+       L     E P LSF+K   L G    N +  
Sbjct: 616 DLCFILQEEYHLNPETRTILFVKTRALVDALKNWIEENPKLSFLKPGILTGRGRTNQTMG 675

Query: 764 MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           M     +  +  FR  R + +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+RGR R
Sbjct: 676 MTLPAQKCALDAFRTNRDSKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 735

Query: 823 KPGSDYILMIERGNL 837
             GS   L+    ++
Sbjct: 736 ARGSKCFLLTSNADV 750


>gi|426222380|ref|XP_004005372.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Ovis aries]
          Length = 943

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 247/555 (44%), Gaps = 64/555 (11%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R +QL++   A+K KNTI    TG GKT +A+L+          Q +K   VF   ++
Sbjct: 241 KPRNFQLELALPAQKGKNTIICAPTGCGKTFVALLICEHHLKQFP-QGRKGKVVFFAVQL 299

Query: 362 PLVYQQAEVIRE---QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           PL  QQ     E   + GY V    GE+     D+   ++  +   ++++T QIL+N L+
Sbjct: 300 PLYEQQKSAFSEYFERLGYKVSGISGEIA----DSVSVEQIVENNDIIILTPQILVNSLK 355

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVNLK 474
              I  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V + 
Sbjct: 356 DGTIPSLSIFTLMIFDECHNTNKNHPYNMIMFNYLDQKLGGSSDSLPQVVGLTAS-VGVG 414

Query: 475 GVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
              ++ +    IC L + LD SV+ T++D  +ELE+    P ++  +             
Sbjct: 415 DAKNEAEATEYICRLCASLDTSVLTTVRDNLEELEEVFYKPQKLFRK------------- 461

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
                  VE       +    Q M   +A AK    ++  V+           + +++  
Sbjct: 462 -------VESRTTDKFKCVISQLMAETEALAKSIFEELGTVTLEN--------LSRIQNR 506

Query: 593 NYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGA 649
           N+   +  QW         + A+Q      +Q+  K +ES + K + L    L    +  
Sbjct: 507 NFGTQKYEQW---------IIAVQKACMV-FQMPDKDEESRICKALFLYTSHLRKYNDAL 556

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEG-ELLDSHVVSGGEHVDV-IIGAAVADGKVTPKVQ 707
           +  +DA++ D+ N      +N    G + ++  +    E   V +   +V      PK++
Sbjct: 557 IISEDARMKDALNYLKNFFSNVRAAGFDAIEQDLTQRFEEKLVELEDISVDPSNENPKLK 616

Query: 708 SLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQE 763
            L  IL  +Y    + R I+FV+       L K   E P LS +K   L G    N +  
Sbjct: 617 DLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEENPKLSLLKPCILTGRGRTNQTMG 676

Query: 764 MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           M     +  +  FR  R + +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+RGR R
Sbjct: 677 MTLPAQKCALDAFRTNRDSKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGR 736

Query: 823 KPGSDYILMIERGNL 837
             GS   L+    ++
Sbjct: 737 ARGSKCFLLTSNADV 751


>gi|255589974|ref|XP_002535144.1| dicer-1, putative [Ricinus communis]
 gi|223523936|gb|EEF27239.1| dicer-1, putative [Ricinus communis]
          Length = 259

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/155 (52%), Positives = 98/155 (63%), Gaps = 7/155 (4%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             +E+ LK KFK+R LL EA T +S P    S Y+RLE VGD+VL+ L TK  +F Y NLP
Sbjct: 34   GVEEILKYKFKNRSLLEEAFTDSSFPGKCFS-YERLEHVGDSVLNLLFTKEHYFKYPNLP 92

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            PG LT LRAA V+ E  ARVAVKH  H  LRH    L+ QIR+F + +LE  L    +S 
Sbjct: 93   PGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLLEEQIREFSQAILEYPL----HSN 148

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            GL D   PKVL DIVES  GA+F+DS      VW+
Sbjct: 149  GLVDV--PKVLADIVESAIGAVFIDSNSSVDTVWK 181


>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1431

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 36/343 (10%)

Query: 667 GGTNEIEEGELLDSH----VVSGGEHVDVIIGAA-VADGKVTPKVQSLIKILLKYQHTED 721
           GG+N++  G L+D +    + S  + V+ ++    + + +++ KV +L KIL+ Y+  +D
Sbjct: 300 GGSNQLMSGRLVDPNYQERIQSLIKEVEKLVDIDDIPENQLSSKVIALYKILVNYKEKDD 359

Query: 722 ---FRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE-------MRTFQMQ 770
              F  I+FVER   A +LP +      L  F++ A+L GH +  E       M +    
Sbjct: 360 HNNFLCIVFVERRQHAQLLPILLERNVQLKDFLRPAALTGHGSGNENDLIGIKMDSRTQN 419

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            T+AKFR G   L +ATSVAEEGLD R C VVIRFDL  T   YIQSRGRAR   SDYI+
Sbjct: 420 RTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 479

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQV-ESTG 889
           M+  G    A         EE L+    +R     ++D       ++ P  + Q+ +   
Sbjct: 480 MLPTGT---ANKYLAFSGKEEQLKAALYDRPQDELIEDGEE----ESTPQLICQLADGKE 532

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRY-SILRPEF-IMERHEKPGGPTEYSCKLQLPCNAPF- 946
           ++++ ++A  L++  C  +P D +  ++ PE+ +ME  E+      + C++ LP  A   
Sbjct: 533 SILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMMELGER------FKCRVTLPPMAALP 586

Query: 947 ---EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                  G    +   A+++    ACK L E+G   +  LP +
Sbjct: 587 PSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQR 629



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 130/231 (56%), Gaps = 9/231 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK-MLAVFLVPKVPL 363
           R YQ ++LE+AKK+N I   +TG GKT++AV LI       + +NK   +  FLVP  PL
Sbjct: 22  RLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKAKNKNHQIQAFLVPTRPL 81

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +QQAE I++     +  Y G++  + W+ ++W  E +   VLV TAQI  +++     K
Sbjct: 82  AHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLISKGYWK 141

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE---KRPSVFGMTASPV-NLKGVSSQ 479
           +E ++LLI DE HH  K H Y+ +M   YH  +K+   + P + G+TASP+ N K +  +
Sbjct: 142 LEDVSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNFKDL-EK 200

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAASLWSL 529
            +  IK  +L+S L + +  +K   E + +H   P+E VV ++ A     L
Sbjct: 201 AESDIK--SLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYFEPAPDFQQL 249



 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 76/454 (16%)

Query: 1329 LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPA-SKI 1387
            L   Y   LP +LC    +P ++ +    LPS+ R +   + A  L  ++++P+    + 
Sbjct: 885  LAHPYRTLLPLKLCQGTHIPRTIWKVFSYLPSLTRLLHDSIQATALFMRLDFPMTLLPRG 944

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            ++ALT       + Y+  E +GDA+LK   S  ++L + +K EG ++ +R + V N  L 
Sbjct: 945  IQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVDNDYLR 1004

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+   L S I   RF   R                                       
Sbjct: 1005 RKAIQANLPSSILGQRFRTDR--------------------------------------- 1025

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
              + D   EDG+   + +  R +  + L+DVVEAL+G  ++ GG +        +G+++ 
Sbjct: 1026 --FRDAQTEDGKELPNGNFSRNVPRRVLSDVVEALLGAGFLTGGIE--------LGLKIG 1075

Query: 1568 SDPEEVGCPSRPAC---------------VPESVLRSVDFHALEDALKIKFKDRGLLVEA 1612
            +  +     + P                 +  S+L  +   ALE+ +   FK++ LLV+A
Sbjct: 1076 TALDLCFGGTTPWNERTLNIAFEGTAHDKLASSIL--LKCQALEEKIGYVFKEKLLLVQA 1133

Query: 1613 ITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFAR 1672
            +TH S  S   +CY+R E++GDAV+D  I +H +  + N     LT  RA  V+N +   
Sbjct: 1134 LTHRSANSFMTNCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLARAKLVSNGSLGF 1193

Query: 1673 VAVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKAPKVLGD 1726
            +A+K   LH  + H S + ++   + +K +     +EE      N F + D   PK+L D
Sbjct: 1194 LAIKKLGLHKVIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENLFVVFD--PPKILND 1251

Query: 1727 IVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
            ++E+I GA+F+DS  D   V++    + +  VTP
Sbjct: 1252 VLEAIVGAVFIDSRFDLPTVYRTIDKIFED-VTP 1284


>gi|154283385|ref|XP_001542488.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410668|gb|EDN06056.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1359

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 216/489 (44%), Gaps = 79/489 (16%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQP++R   V   +NLL    + + EQE  GEE     YY+   PE   I  LP  +   
Sbjct: 823  KQPVVRAELVRLRRNLL----DRATEQE-RGEET---AYYIC--PEPLRISALPPPVAAF 872

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A   P+I+ R+ES L++++  DK+   +     LEALT  S         Q  F      
Sbjct: 873  AFAFPAIISRIESYLISLEACDKLQLSIETHLALEALTKDSDNTEEHRKEQIHFQRGMGK 932

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   S  LF   P   E      R  ++ N  L+  A+   L  +++
Sbjct: 933  NYERLEFLGDCFLKMATSISLFAMNPDNDEFDFHVKRMCLICNQNLFNTAVRLKLYEFVR 992

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F+   W   G+                                        +  G+ 
Sbjct: 993  TQGFSRRNWYPEGI---------------------------------------KLLQGKA 1013

Query: 1521 EGDSSSYR-VLSSKTLADVVEALIGVYYVEGGKDAA-NHLMKWIGIQVESDPEEVGCPSR 1578
            + +S+  +  L  KT+AD+ EALIG   + GGK    +  +K + + V+SD   V   + 
Sbjct: 1014 QPESAQNKQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNS 1073

Query: 1579 PA---CVPESVLRSVDFHALEDALKI------KFKDRGLLVEAITHASRPS--SGVSCYQ 1627
                  +P   +   D   L+ A +I       F    LL  A THAS PS  S V CYQ
Sbjct: 1074 YIDLYSLPSYQIAQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQ 1133

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            RLEF+GD++LD +  ++L+  Y +  P  LT+ + A V+N+    V VK  LH HL + S
Sbjct: 1134 RLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYIS 1193

Query: 1688 SALDRQIRDFVKEVLEELLKPGFNSFGLGDCKA--PKVLGDIVESIAGAIFLDSGRDTSV 1745
            +AL  QI  + +E+ E  +    +S       +  PK L D++E+  GAIF+DS     V
Sbjct: 1194 NALFGQITRYAEEI-EVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEV 1252

Query: 1746 VWQVFQPLL 1754
            V   FQ  L
Sbjct: 1253 VEDFFQRYL 1261



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 20/205 (9%)

Query: 392 DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEF 451
           D + W++ F    ++V TA++L   L  S I+ME INLLI DE H A K+HPY+ ++ +F
Sbjct: 114 DTETWEKHFSKNMIIVCTAEVLCQCLLRSFIRMEQINLLIFDEAHRAKKEHPYARIVKDF 173

Query: 452 Y-HTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHV 510
           Y      +KRP +FGMTASPV+ K     VD A    NLE+ LDS + T  +   L + +
Sbjct: 174 YLRRPEAQKRPKIFGMTASPVDAK-----VDVAKAAKNLETLLDSQIATASNLDALRQAI 228

Query: 511 PMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEEL--- 567
             P+E          +W + E  K    A+E ++      S W +  A +A    +L   
Sbjct: 229 ARPTE---------QIWVIRELEKIFFYALEASSMLGKWCSDWLWTFALEATELPKLEGR 279

Query: 568 --RQVYGVSERTESDGAANLIQKLR 590
             +     S R  S G    I+ LR
Sbjct: 280 VSKNYMQSSSRDHSKGLDEAIKLLR 304



 Score = 51.2 bits (121), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 139/352 (39%), Gaps = 73/352 (20%)

Query: 646 VEGAVSKK--DAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
           +EG VSK    +   D   G  E      E G+L+ +H       VD           ++
Sbjct: 276 LEGRVSKNYMQSSSRDHSKGLDEAIKLLREAGQLIRNHTFDTP--VD-------CPAHLS 326

Query: 704 PKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-HNNS 761
            KV+ L+  L L ++   D + I+FV++   A +L ++F+ + +   +++  LIG  ++ 
Sbjct: 327 SKVRLLLHELSLYFERHTDTKCIVFVQQRHTARLLAELFSRIGT-RHMQTGILIGVQHDG 385

Query: 762 QEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                F  ++   T+ KFR G +  LV                                 
Sbjct: 386 IGGANFSFRQQFLTLLKFRKGELNCLV--------------------------------- 412

Query: 819 GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAI--------ERTDLSHLKD 868
            R       Y  M+ER NL HA+ ++ A+ +E  +R+  EA+           DL    D
Sbjct: 413 -RPELDHDSYAHMVERDNLIHASCIQEAQRAEHIMRRFCEALPEDRIIRGSSDDLGMNLD 471

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
             R           + V STGA ++  S++ ++  Y S L  ++ +  +  + +ER +  
Sbjct: 472 KERY-------HKSFTVHSTGATLTYPSSLVVLAHYASSLQYEKETSPQVNYFIERIDGA 524

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTD 980
                + C+  LP  +PF  L G   +    A+Q+     C  L + G   D
Sbjct: 525 -----FVCEAILPEKSPFRGLTGKPSARKLHARQSAAFETCLMLRKNGILDD 571


>gi|160285502|pdb|2EB1|A Chain A, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
            Human Dicer
 gi|160285503|pdb|2EB1|B Chain B, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
            Human Dicer
 gi|160285504|pdb|2EB1|C Chain C, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
            Human Dicer
          Length = 200

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 107/177 (60%), Gaps = 10/177 (5%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYT 1650
            F   E  +  +FK++  L++A THAS   + ++ CYQRLEF+GDA+LD+LITKHL+    
Sbjct: 8    FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPR 67

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE------- 1703
               PG LTDLR+A VNN  FA +AVK+  H + +  S  L   I DFV+  LE       
Sbjct: 68   QHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGM 127

Query: 1704 --ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
              EL +   +     D + PK +GDI ES+AGAI++DSG     VWQV+ P++ P++
Sbjct: 128  DSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLI 184



 Score = 48.5 bits (114), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 1374 LKDKINYPVP-ASKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
             + KINY     + +L+A T AS      T CY+R E LGDA L +++++ L+    Q  
Sbjct: 11   FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 70

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
             G LT +R  +V+N +    A+      Y +A
Sbjct: 71   PGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 102


>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1431

 Score =  141 bits (356), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 36/343 (10%)

Query: 667 GGTNEIEEGELLDSH----VVSGGEHVDVIIGAA-VADGKVTPKVQSLIKILLKYQHTED 721
           GG+N++  G L+D +    + S  + V+ ++    + + +++ KV +L KIL+ Y+  +D
Sbjct: 300 GGSNQLMSGRLVDPNYQERIQSLIKEVEKLVDIDDIPENQLSSKVIALYKILVNYKEKDD 359

Query: 722 ---FRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE-------MRTFQMQ 770
              F  I+FVER   A +LP +      L  F++ A+L GH +  E       M +    
Sbjct: 360 HNNFLCIVFVERRQHAQLLPILLERNVQLKDFLRPAALTGHGSGNENDLIGIKMDSKTQN 419

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            T+AKFR G   L +ATSVAEEGLD R C VVIRFDL  T   YIQSRGRAR   SDYI+
Sbjct: 420 RTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 479

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQV-ESTG 889
           M+  G    A         EE L+    +R     ++D       ++ P  + Q+ +   
Sbjct: 480 MLPTGT---ANKYLAFSGKEEQLKAALYDRPQDELIEDGEE----ESTPQLICQLADGKE 532

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRY-SILRPEF-IMERHEKPGGPTEYSCKLQLPCNAPF- 946
           ++++ ++A  L++  C  +P D +  ++ PE+ +ME  E+      + C++ LP  A   
Sbjct: 533 SILTYSAATSLLNDVCQLIPPDEFLPVVAPEYEMMELGER------FKCRVTLPPMAALP 586

Query: 947 ---EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                  G    +   A+++    ACK L E+G   +  LP +
Sbjct: 587 PSRRTFTGLEMGTKNGAKRSAAFEACKVLRELGVLNEHFLPQR 629



 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 204/460 (44%), Gaps = 78/460 (16%)

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP 1383
            + E  L   Y   LP +LC    +P ++ +    LPS+ R +   + A  L  ++++P+ 
Sbjct: 880  QSESTLAHPYRTLLPLKLCQGTHIPRTIWKVFSYLPSLTRLLHDSIQATALFMRLDFPMT 939

Query: 1384 A-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
               + ++ALT       + Y+  E +GDA+LK   S  ++L + +K EG ++ +R + V 
Sbjct: 940  LLPRGIQALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYLSHLRKGEGDMSHVRSKSVD 999

Query: 1443 NLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLG 1502
            N  L + A+   L S I   RF   R                                  
Sbjct: 1000 NDYLRRKAIQANLPSSILGQRFRTDR---------------------------------- 1025

Query: 1503 TDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL---- 1558
                   + D   EDG+   + +  R +  + L+DVVEAL+G  ++ GG +    +    
Sbjct: 1026 -------FRDAQTEDGKELPNGNFSRNVPRRVLSDVVEALLGAGFLTGGIELGLKIGTAL 1078

Query: 1559 -------MKW----IGIQVESDP-EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDR 1606
                     W    + I  E    +++  P    C            ALE+ +   FK++
Sbjct: 1079 DLCFGGTTPWNERTLNIAFEGTAHDKLASPILLKC-----------QALEEKIGYVFKEK 1127

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             LLV+A+TH S  S   +CY+R E++GDAV+D  I +H +  + N     LT  RA  V+
Sbjct: 1128 LLLVQALTHRSANSFMTNCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLARAKLVS 1187

Query: 1667 NENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKA 1720
            N +   +A+K   LH  + H S + ++   + +K +     +EE      N F + D   
Sbjct: 1188 NGSLGFLAIKKLGLHKMIMHKSESFEQACVEAIKAIEPFTSIEEFFSNLENLFVVFD--P 1245

Query: 1721 PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP 1760
            PK+L D++E+I GA+F+DS  D   V++    + +  VTP
Sbjct: 1246 PKILNDVLEAIVGAVFIDSRFDLPTVYRTIDKIFED-VTP 1284



 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 9/231 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK-MLAVFLVPKVPL 363
           R YQ ++LE+AKK+N I   +TG GKT++AV LI       +  NK   +  FLVP  PL
Sbjct: 22  RLYQTELLEEAKKRNIIIRADTGTGKTIVAVNLIAWTAVKTKANNKNHQIQAFLVPTRPL 81

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +QQAE I++     +  Y G++  + W+ ++W  E +   VLV TAQI  +++     K
Sbjct: 82  AHQQAEYIQKHCTLRIKAYTGDLQPELWNIRKWHSELNEVDVLVSTAQIFYDLISKGYWK 141

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE---KRPSVFGMTASPV-NLKGVSSQ 479
           +E ++LLI DE HH  K H Y+ +M   YH  +K+   + P + G+TASP+ N K +  +
Sbjct: 142 LEDVSLLIFDEAHHCRKNHVYNQIMRSHYHRLAKDSTVRLPKILGLTASPIWNFKDL-EK 200

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAASLWSL 529
            +  IK  NL+S L + +  +K   E + +H   P+E VV ++ A     L
Sbjct: 201 AESDIK--NLQSALAAQIYEVKKHTEDVCRHNFKPNEQVVYFEPAPDFQQL 249


>gi|167046028|gb|ABZ10545.1| dicer-like protein D [Trichoplax adhaerens]
          Length = 351

 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 171/384 (44%), Gaps = 71/384 (18%)

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            S  + F +ER E+LGD+YLK++ +   F + P   EG ++ MR   VSN  L + +  KG
Sbjct: 1    SADDFFNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKG 60

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  Y     F   +W  PG   +                            N N   ++ 
Sbjct: 61   LTLYQFNTPFKLKQWLPPGFTCI--------------------------RNNANLVANNM 94

Query: 1515 MEDGELEGDSSSYR-VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
            + DG  + DS S++ V+S K ++D VE L+GVY +  G   A  L+ WIG+ +  DP   
Sbjct: 95   LTDGSKQRDSESFKQVMSVKNISDTVEGLVGVYSLASGPVDAARLLPWIGLDI--DPNVL 152

Query: 1572 ---------EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
                     E+        +   +LR+ D+         +F +   L  A TH+S  S  
Sbjct: 153  IEKDKSVNFEIPTTDEDIQLSSCILRNTDY---------QFNNFYWLRIAFTHSSVASEN 203

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
               YQRLE++GDA+L++L+ + ++       PG+++  ++    N+ F+ +A+  + + H
Sbjct: 204  ---YQRLEYLGDAILEYLLIEFVYCRKPYFGPGKISHFKSVMTRNQTFSLIAIAFQFYTH 260

Query: 1683 LR-HGSSALDRQIRDFVKEVLEELL-------KPGFNSFGLGDC---------KAPKVLG 1725
            +R H    LD  I D ++   E LL       +P    F              K PKV  
Sbjct: 261  IRCHSKLKLD--IMDSIQNFKEILLDNHQDDHQPDIGHFANLAYQLYTSNRYQKLPKVCA 318

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQV 1749
            D+ E+   AI+LD G+    VW+V
Sbjct: 319  DVFEAFIAAIYLDCGKKLRTVWKV 342


>gi|320590575|gb|EFX03018.1| rnase3 domain containing protein [Grosmannia clavigera kw1407]
          Length = 1246

 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 226/531 (42%), Gaps = 88/531 (16%)

Query: 1292 IFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSL 1351
            I + QP++    ++  +NLL  R  H +  E +           FL  E   I PLP  +
Sbjct: 644  IKENQPVVEAEIITNRRNLLDDRV-HLDNPEQK---------ICFLVLETLKISPLPAEI 693

Query: 1352 VRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEALTAASCQETFC--------- 1401
            V  A  +P I+ R+ES L+A++    I  P +     LEA+T   C              
Sbjct: 694  VAMAFNIPVIIHRIESTLIALEATSVIGIPRIRPELALEAVTK-DCDNPDAQDETPLNFQ 752

Query: 1402 ------YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
                  YER ELLGD++LK   S  LF   P K E +    R  M+ N  L+  AL   L
Sbjct: 753  AGMGRNYERLELLGDSFLKLATSIALFTLVPDKDEFEYHVQRMCMICNRNLFNNALDMKL 812

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            + YI++  F  + W  P +    +E  K  D+  +         + G            +
Sbjct: 813  EEYIRSREFDRT-WYPPTI----EEAGKSTDNDNYSDNTPAPPSQNGLV----------L 857

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL-MKWIGIQVESD----- 1569
            + G+      ++  L  KT+ADV EA+IG  Y+   ++    L ++ +   V+S      
Sbjct: 858  QKGK-RTQLPTHHPLGDKTIADVCEAMIGAAYLTTYEERNFDLAVQAVSAVVKSKLHPMQ 916

Query: 1570 -----------PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
                       P    CPS  A +  +V  + D       L  +F+   LL  A TH S 
Sbjct: 917  SYAEYYTAYKPPGWQLCPSTAAQLHMAVSIAKD-------LGYQFRFPRLLRSAFTHPSY 969

Query: 1619 PS--SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK 1676
            P     +  YQRLEF+GDA+LD  I  +LF  ++N  P  LT+ + A V+N+  A ++V 
Sbjct: 970  PRIYENLPSYQRLEFLGDALLDMAIVDYLFHKFSNKDPQWLTEHKMAMVSNQFLAFLSVS 1029

Query: 1677 HKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD-------------CKAPKV 1723
               H H+   S  + +QI ++V +V EE ++    +   G                 PK 
Sbjct: 1030 LGFHRHILSFSGEMRKQILEYVTKVEEERVRAESEAVEAGRPASEFARDYWVHVTHPPKA 1089

Query: 1724 LGDIVESIAGAIFLDSGRDT-SVVWQVF----QPLLDPMVTPETLP-MHPV 1768
            L D++E+  GA+F+DS  D    V + F    QP    M   +T    HPV
Sbjct: 1090 LADVLEAYVGALFVDSEYDYHGTVLKFFNTHVQPYFKDMSLYDTFANKHPV 1140



 Score =  140 bits (353), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 10/224 (4%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFL 357
           E  R YQ+++ E+AK+KN IA L+TG+GKTLIA LL+R + +    D  +     L+ FL
Sbjct: 122 ESPRDYQVELFEKAKQKNVIAVLDTGSGKTLIAALLLRHMIDKELEDRSQGKPARLSFFL 181

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNI 416
           V KV LV+QQ  V+     + V  + G+     W ++  W         +V TA ILL  
Sbjct: 182 VDKVALVFQQHAVLECNLSHSVAKFSGDKVDLRWTSKSFWDDVLRDNMAIVCTADILLKC 241

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
           L HS + ME INLLI DE HH  K H Y+ ++ +FY       RP +FGMTASPV+    
Sbjct: 242 LHHSYVCMEQINLLIFDEAHHTKKNHAYARIIKDFYAHECPSNRPKIFGMTASPVD---- 297

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
            ++ + A     LE+ L S + T+ +   L        E V+ Y
Sbjct: 298 -ARTNIAQAAEELEALLHSEIATVSNDLLLHSVAKPKKEWVLHY 340


>gi|294463153|gb|ADE77113.1| unknown [Picea sitchensis]
          Length = 173

 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/144 (53%), Positives = 98/144 (68%), Gaps = 7/144 (4%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            LED LK KFK + LL EAITH+S  ++    Y++LEFVGD+VL +L+TKHL+ +Y  L  
Sbjct: 22   LEDILKYKFKSKSLLKEAITHSS--NNNTESYEKLEFVGDSVLGYLVTKHLYCAYPKLYQ 79

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT LR+  V+ E FARV VKHK H +L   + AL + I DFVK++ +E       SF 
Sbjct: 80   GTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNAPALQQIIEDFVKDIEDE-----SKSFR 134

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLD 1738
             GD K PKVL DIVESIAGA+F+D
Sbjct: 135  CGDFKPPKVLADIVESIAGAVFVD 158



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 47/181 (25%)

Query: 1373 QLKDKINYPVPASKIL-EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
            +L+D + Y   +  +L EA+T +S   T  YE+ E +GD+ L ++V++ L+  YP+ ++G
Sbjct: 21   ELEDILKYKFKSKSLLKEAITHSSNNNTESYEKLEFVGDSVLGYLVTKHLYCAYPKLYQG 80

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
             LT +R + V      +  +      Y+  +        AP +  + ++  KD       
Sbjct: 81   TLTLLRSRNVDTEKFARVCVKHKFHQYLLLN--------APALQQIIEDFVKD------- 125

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRV---LSSKTLADVVEALIGVYYV 1548
                                        +E +S S+R       K LAD+VE++ G  +V
Sbjct: 126  ----------------------------IEDESKSFRCGDFKPPKVLADIVESIAGAVFV 157

Query: 1549 E 1549
            +
Sbjct: 158  D 158


>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
           Full=Endoribonuclease DCL-1; Includes: RecName:
           Full=ATP-dependent helicase DCL-1
 gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
          Length = 1548

 Score =  141 bits (355), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 130/224 (58%), Gaps = 12/224 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNKKM---LAVFLVPK 360
           R YQ+++ E+AK++NTIA L+TG+GKTLIA LL+    N +L+ + K +   +A FLV K
Sbjct: 100 RDYQMELFERAKQQNTIAVLDTGSGKTLIAALLLDHTVNQELEDRAKGLPRRIAFFLVEK 159

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L +QQ  V+     + V  + GE  ++ W    W+ +    +V+V TA+IL   L+++
Sbjct: 160 VALAFQQHAVLECNLAHSVAVFSGESIKNTWTKGFWETQLADHEVIVCTAEILNQCLQYA 219

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSS 478
            I+++ INLL+ DE HH  K HPY+ ++ ++Y +      + P +FGMTASPV+     +
Sbjct: 220 YIRIDQINLLVFDEAHHTKKNHPYARIIKDYYASGKDRGLRLPRIFGMTASPVD-----A 274

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMP-SEVVVEYD 521
            +D       LE  L S + T  D   L + V  P  E++ +Y+
Sbjct: 275 LIDVRQAAIELEGLLHSRIATTADPDALRRAVGRPKKEIIYKYN 318



 Score =  124 bits (310), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 242/620 (39%), Gaps = 133/620 (21%)

Query: 1227 DSCANAGD-----LEGRIVTAAHSG-KRFYVESIRYEMTAESSFP-------------RK 1267
            D+ A  GD      + + +   H G +RF+++ IR ++T  S  P             R+
Sbjct: 880  DAEAYTGDEPEEFFQDKYIVDPHDGARRFWLQGIRKDLTCTSPVPADVEHQPTHRQWKRR 939

Query: 1268 EGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEE 1327
            E     L +S  A    ++       + QP++ G+  +  +N L+   E S+        
Sbjct: 940  EVPHDILHWSLTAWKATREAHENKWKENQPVVVGKYATLRRNFLADINETSKNP------ 993

Query: 1328 ILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI 1387
                 Y+V  P     I PLP  +V  A  LPSI+ R+E  L+A+     +   +     
Sbjct: 994  ---FCYFVLEPMR---ISPLPVDVVAMAYLLPSIIHRIEQNLIALDACRLLQLDIHPDLA 1047

Query: 1388 LEALTAAS----------CQETF-----------CYERAELLGDAYLKWVVSRFLFLKYP 1426
            LEALT  S            + F            YER ELLGD++LK   +  +F   P
Sbjct: 1048 LEALTKDSDNQGEDERMDSIQAFEPVNFQPGMGANYERLELLGDSFLKMATTIAVFTLIP 1107

Query: 1427 QKHEGQLTRMRQQMVSNLVLYQYALSKGLQ--SYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
             K E      R  M+ N  L+  A S  L+   YI++  F    W      PV       
Sbjct: 1108 NKDEFDYHCERMVMICNQNLFGVAKSDDLKLHEYIRSKSFERGTW-----YPVL------ 1156

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                    +    +  L T K  +E+                   L+ K++ADV EALIG
Sbjct: 1157 --------KLEFGKTHLKTLKQMDEHR------------------LADKSIADVCEALIG 1190

Query: 1545 VYYVEGGK----DAA--------NH----LMKWIGIQVESDPEEVGCPSRPACVPESVLR 1588
              Y+   K    D A        NH    + KW            G  + PA   E  + 
Sbjct: 1191 AAYMTTRKHDDYDLAVRAVTRLVNHKQHPMTKWDDYHAAY--VMPGWQTMPANAAELDMA 1248

Query: 1589 SVDFHALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDAVLDHLITKHLF 1646
                  + +A   +FK   +L  A  H SRP     V  YQRLEF+GDA+ D     +LF
Sbjct: 1249 ----QKIHEATGYQFKHPRVLRSAFRHPSRPYVFDKVPHYQRLEFLGDALFDMACVDYLF 1304

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
                +  P  LT+ + A V+N+    +AV    H  + H  +++  QI ++V E+ E   
Sbjct: 1305 HIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFILHHHASIGSQIHEYVTEITEARR 1364

Query: 1707 KPGFNSFGLGDCKA-------------PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-- 1751
                 +   G  ++             PK + D++E+  GAIF+DS  D SVV Q F   
Sbjct: 1365 AAEDAAEAAGKPRSAYSRDYWVEAPQPPKCIPDVLEAYVGAIFVDSKYDYSVVQQFFHAH 1424

Query: 1752 --PLLDPMVTPETLP-MHPV 1768
              P    M   +T    HPV
Sbjct: 1425 VLPFFASMRMYDTFANKHPV 1444



 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 149/304 (49%), Gaps = 36/304 (11%)

Query: 700 GKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVF----AELPSLSFVKSASL 755
           G ++ K+++L K+L +Y      R I+FVER   A +L   F    AE+P L   K  SL
Sbjct: 420 GLLSSKLKTLSKLLEEYFTDSSIRCIVFVERRWTAKLLTDFFESHAAEIPGL---KVGSL 476

Query: 756 IGHN--NSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
           +G N        +F+ Q  TI  F+ G    + ATSVAEEGLDI  CN++IRFD+ KT++
Sbjct: 477 MGANAEGGSSQTSFREQIRTILSFKKGNTNCIFATSVAEEGLDIPDCNLIIRFDICKTMI 536

Query: 813 AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL 872
            YIQSRGRAR+  S YI +IE GN  H   +     +E+ LR+    + +   LK +   
Sbjct: 537 QYIQSRGRARQADSTYIHLIEGGNGDHRRIMHQNAENEKLLRRFCNTQPEDRLLKGSDYD 596

Query: 873 ISV---DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSD-----------RYSILRP 918
           +            Y ++STGA ++  +++ ++  + + L +             YSIL  
Sbjct: 597 MDFFLRQERNQRQYTIKSTGARLTYKNSLPILQAFLNTLRNQDDYAEGMDLVADYSILSV 656

Query: 919 EFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAF 978
           +         GG   + C++ +P  +P     G V S+ ++A+ +     C +L +    
Sbjct: 657 Q---------GG---FICEVMMPPLSPVTSAIGKVYSTKQVAKCSAAFELCFQLIQKKFL 704

Query: 979 TDML 982
            D L
Sbjct: 705 DDHL 708


>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1393

 Score =  141 bits (355), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 219/525 (41%), Gaps = 110/525 (20%)

Query: 1324 EGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP 1383
            +GE    K  Y+ LP   C I  LP         + +I+ R+E+ L+A +L D I   V 
Sbjct: 881  DGEADAPKKSYI-LPAAACVIDKLPAKQAVFGLFISAILDRLEASLVAHRLNDTILKGVG 939

Query: 1384 ASKILEALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
               I   +TA S    Q +  Y+R E  GD+ LK+ VS  LF +    HEG L+  R ++
Sbjct: 940  IKDIAHVITAISAPIAQASTNYQRYEFFGDSVLKFTVSCQLFFRNGNWHEGYLSESRDKL 999

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            + N  L + AL  G+ S++   RF P +W  P +                          
Sbjct: 1000 IQNSRLARAALDLGIDSFVLTSRFTPRKWTTPLI-------------------------- 1033

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
                   N+ E            S++ R +S+K LADVVE+LIG  YV+GG   A   + 
Sbjct: 1034 ------RNKLE-----------PSTAKRNISTKVLADVVESLIGAAYVDGGIREAQACLH 1076

Query: 1561 WIGIQVESDPEEVGCPSRPACVPE--SVLRSVDFHALEDALKIKFKDRGLLVEAITHAS- 1617
                ++     ++     P  +P+   V   ++ H L   +   F D  LL EA+THAS 
Sbjct: 1077 RFLPEINLFTNDIS----PLILPQGKGVSNLINHHRLAGLIGYTFNDPALLTEALTHASC 1132

Query: 1618 RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA--- 1674
               +    YQRLEF+GDAVLD ++   +      +  G +T L+ + VN    A      
Sbjct: 1133 EYDTSTQSYQRLEFLGDAVLDMVVMAVIAGHPVEMDQGPMTLLKHSVVNANLLAFFCMEL 1192

Query: 1675 -------------------VKHKLHVHL-----RHG-------SSALDRQ--IRDFVKEV 1701
                               V     +HL      HG        + L+R   +R  +++ 
Sbjct: 1193 CAPDEPSHVTQFTNGGINLVPRYDQIHLWRFLRSHGPNIKSAQEACLERHQGLRAEIRDA 1252

Query: 1702 LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV----------VWQVFQ 1751
            LE   +  +  F     +A K L DI+ES+ GAIF+D G D  V          VW + +
Sbjct: 1253 LENGTQYPWELF--ARLRADKFLSDIIESVLGAIFIDCGGDLDVCYAFVERIGLVWYIQR 1310

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASR--SGNLAT 1794
             + D +       +HP R + +   + A  L +K  R  SG +AT
Sbjct: 1311 VIADGVNV-----VHP-RNIAQNMVKGAGTLVFKRKRVESGGVAT 1349



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 30/241 (12%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKT-------------LIAVLL--IRSICNDLQR 347
           ++R YQL++LE ++K+N I  ++TG+GKT              + V    I  I ++L+ 
Sbjct: 14  RSRGYQLEMLEASRKENIIVAMDTGSGKTHMHVSSFTFCRHVFLTVFFSAILRIIDELEN 73

Query: 348 QNKK-MLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFW-DAQRWQREFDTKQ 404
            +    L  FL P V L  QQ EVI  Q   V      G    D W D   W +     +
Sbjct: 74  SDSPDKLIWFLAPTVALSLQQHEVITSQILSVKTKILTGLDNVDRWTDQGIWDKVLKDIR 133

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKR 460
           V+V T  +L + L H  ++M  + LL+ DE HH  K+HP + +M   YH T         
Sbjct: 134 VVVSTYAVLADALGHGFVRMSRLALLVFDEAHHCTKRHPANKIMQNHYHPTLLRSGPNAV 193

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVE 519
           P + G+TASPV ++   ++++       +ES L+++  T +  R EL ++   P    V 
Sbjct: 194 PRILGLTASPV-VRSSQNELE------TIESNLNAICKTPRVHRTELLENTHRPHLERVN 246

Query: 520 Y 520
           Y
Sbjct: 247 Y 247



 Score = 75.9 bits (185), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 37/303 (12%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNN 760
           V+ K++ L+  L K      F  ++F ++     VL ++ +  P +    + A+ +G ++
Sbjct: 377 VSVKLEMLLNFLEKMDR-PGFSGLLFAKQRATVSVLARILSIHPKTRDRFQCAAYVGWSS 435

Query: 761 SQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            +       ++    MQ +T+ +F+ GR  L+V T V EEG+D+  C++VI +D    + 
Sbjct: 436 DRNRKGCLGDLLHRDMQRDTLDEFKVGRKNLIVTTDVLEEGIDVSACSLVICYDKPANLK 495

Query: 813 AYIQSRGRARKPGSDYILMI----ERGNLSHATFLRNAR----NSEETLRKEA--IERTD 862
           +++Q RGRAR   S Y LMI    E  NL     L  A       +E  R+E   +E T+
Sbjct: 496 SFVQRRGRARHRESTYALMISNEDELLNLHKWQELEQAMIKAYQDDERRRREVYDLEATE 555

Query: 863 LSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIM 922
             H+K+  RL            VE T A+++ + A+  ++ +C+ LP D YS   P F  
Sbjct: 556 -EHVKE--RL-----------WVEKTSALLTADDALQHLYHFCAVLPVDEYSNNLPLFSF 601

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPV-CSSMRLAQQAVCLAACKKLHEMGAFTDM 981
           +  E   G    +  L    +    +  G     + R A++     A K LH  G   D 
Sbjct: 602 Q--ENSVGLLLGTVTLPNSVHPTVRRTTGKAWWRTERAARKETAFQAYKALHAYGLVNDN 659

Query: 982 LLP 984
           LLP
Sbjct: 660 LLP 662


>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
          Length = 1524

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 116/200 (58%), Gaps = 11/200 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNK-KMLAVFLVPKVP 362
           R YQLD+ E+AK++NTI  L+TG+GKT IAVLL+R +   +L++Q + K  A FLV KV 
Sbjct: 123 RQYQLDLFERAKQQNTIIVLDTGSGKTYIAVLLLRHVLALELEKQQQTKRTAFFLVDKVA 182

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           L  QQ   ++    Y VG + G+        + W  E     V+V TAQILL++L   ++
Sbjct: 183 LCLQQHRFLQANLEYPVGKFYGDKAS----MREWASEIQENMVIVCTAQILLDLLSSGLV 238

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           KM  +NLL+ DE HH  K HPY+ +M + Y    K  RP + GMTASPV+    S   D 
Sbjct: 239 KMNQVNLLVFDEAHHTKKNHPYASIMRDHY-IRMKADRPRILGMTASPVD----SKTRDF 293

Query: 483 AIKICNLESKLDSVVCTIKD 502
                +LE+ L S + T+ +
Sbjct: 294 YAAALDLEATLCSKIATVSE 313



 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 231/574 (40%), Gaps = 81/574 (14%)

Query: 1234 DLEGRIVTAAHSGKR-FYVESIRYEMTAESSFPR-------KEGYLGPLEYSSYADYYKQ 1285
            D   R V   + G R F+  ++     A    P        +  +      + Y++    
Sbjct: 916  DFMDRFVIDPYDGSRKFFTSNVNKNYQAFDPVPSGVPPPKSRSYFRAQRNIAQYSNSLSY 975

Query: 1286 KYGVELIFK-KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFI 1344
            K+   +I+  +QP+     +   +NLL         +  +G+    +  ++ L P    I
Sbjct: 976  KFRQSIIWNSEQPVFDAELLPLRRNLLC--------EPDQGDIHSPRGCFIILEP--LAI 1025

Query: 1345 HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAA----SCQETF 1400
              LP  +V  A  LP  +  +ES  +A+     I+  +     LEALT +      Q   
Sbjct: 1026 STLPVDVVVTALALPVTIYSIESAAIAMDACGLIDLAIYPPLALEALTKSEEDVDVQSNK 1085

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGDA+LK   +  LF   P K+E +    R  ++ N  L+ +A+ +GLQ Y++
Sbjct: 1086 NYERLEFLGDAFLKMATTISLFTLIPNKNEFEYHVERMILICNKNLFNHAVDRGLQEYVR 1145

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
            +  F    W                                        Y D  +  G+ 
Sbjct: 1146 SRGFDRRSW----------------------------------------YPDLVLRKGKK 1165

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYV---EGGKDAANHLMKWIG-----IQVESDPEE 1572
                +    L+ K++ADV EALIG  Y+   EG   A   + K +      +   SD  E
Sbjct: 1166 HKPVALTHRLADKSIADVCEALIGAAYMTEPEGMNLAVKAVTKMVQSRNHRMTKYSDYYE 1225

Query: 1573 VGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEF 1631
                     +P   +  +    +E ++  KF+   LL  A  H S P    +  YQRLEF
Sbjct: 1226 GYVQQAWQTIPPRPIEVLAADKVEGSIGYKFRSPKLLRSAFKHPSYPYEPELPNYQRLEF 1285

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GDA+LD  I   LF  Y    P  LT+ + A  +N  F+ + V+  LH H+    S++ 
Sbjct: 1286 LGDALLDVAIVDFLFRRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSMM 1345

Query: 1692 RQIRDFVKEVLEELLKPGFN----SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW 1747
              I  FV+++ +  L+         F L     PK L DI+E++ GA++ DS  D + V 
Sbjct: 1346 GHIAGFVEQIEKAKLQTEDGVLQLDFWLNTEHPPKALSDILEAVVGAMYEDSKYDYNSVR 1405

Query: 1748 QVFQPLLDPMVTPETL-----PMHPVRELQERCQ 1776
              F   + P     TL       HPV +L +  Q
Sbjct: 1406 DFFTKFIAPHFQDMTLYDTYAAGHPVTQLTKLMQ 1439



 Score = 99.0 bits (245), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 21/280 (7%)

Query: 705 KVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVF----AELPSLS--FVKSASLIG 757
           KV +L ++L   ++  +  R I+FV++   A +L + F      +P ++  FV   S   
Sbjct: 451 KVHALHEVLHDVFECQQGTRCIVFVQKRYIAFLLSEAFNLSVLRVPDMAAGFV-VGSQPA 509

Query: 758 HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            ++   M      E + +FR G    + AT VAEEG+DI +C+++IRFDL  + + YIQS
Sbjct: 510 SSSIVNMSIKDQTEALDRFRYGETNCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQS 569

Query: 818 RGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK-----EAIERTDLSHLKDTSRL 872
           +GRAR+  S YI M+ER N+ H   L  A      LR+      +  + D + + D   L
Sbjct: 570 KGRARQVHSVYINMVERDNIHHRRRLMQAARDVHALRRFCSSLPSDRKIDEAEIDDG--L 627

Query: 873 ISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
           + +       ++V  TGA ++ +S+ G++  + S +     +   PE+I+     P    
Sbjct: 628 LKLRVKSQISFEVPQTGARLTFDSSRGVLAKFVSSVCGG--ADAHPEYIV----TPTNTG 681

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
           +++  + LP + P +   G    S  LA+ +    AC +L
Sbjct: 682 KFTAIVLLPDSCPIKSSSGTPQRSKLLARGSAAFKACIEL 721


>gi|390331519|ref|XP_780474.2| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
           [Strongylocentrotus purpuratus]
          Length = 710

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 246/555 (44%), Gaps = 105/555 (18%)

Query: 321 IAFLETGAGKTLIAVLLI--RSIC-NDLQRQN-KKMLAVFLVPKVPLVYQQAE-VIREQT 375
           +  L TG GKT +A+ LI  R +  N +   N +K  +VF+V KVPLV QQ +  ++   
Sbjct: 1   MVVLPTGTGKTEVAIALISRRFLARNPVGATNHRKQKSVFVVNKVPLVKQQKDRCLKYLR 60

Query: 376 GY--VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA--INLLI 431
           G   V G    E+     D        D   + V+TAQ+L+N L+   IK+E   I LL+
Sbjct: 61  GMCEVAGASGEELNHVPLDIV-----IDANDITVLTAQVLVNALKDENIKLELSDIALLV 115

Query: 432 LDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTASP-VNLKGVSSQVDCAI-KI 486
           LDECHH  K +PY+++M+ +      T K  RP + GMTASP V       Q +C I K+
Sbjct: 116 LDECHHCQKSNPYNVLMAMYRDLKLNTPKLPRPQILGMTASPGVGDSKNMVQAECYITKL 175

Query: 487 CNLESKLDSVVCTIK---DRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEA 543
           C   + LD ++   K   D+ + + + P  ++++V   K   L   +             
Sbjct: 176 C---ANLDCIISRPKIYADKLKAKSNSPKETQIIV---KGRPLEDPY------------- 216

Query: 544 AQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWC 603
                                   R++  + ER E      L++  RA+     E  +  
Sbjct: 217 -----------------------FREISVIMERIED--KIKLVEAGRALVEGNDEFTKMV 251

Query: 604 AYKVAQSFLTALQNDERANYQLDVKFQESY--------LSKVVSLLQCELVEGAVSKKDA 655
           + + AQS+       E+    L  K QE+         L   VS L+ E        +DA
Sbjct: 252 SRRGAQSY-------EQGVVNLKKKIQETIENEDDRRELMACVSYLR-EYNNSLFINRDA 303

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG------------KVT 703
           +  D+   ++E   NE E          S     D+I+     D              + 
Sbjct: 304 RTSDAI-SYMEDYINEEERS--------SPSGPADMILKKMFRDKLQTLNRIANLHMSIN 354

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ 762
           P +  L K L K Y   E+  +IIF +   +A  L K   E P L+ +K+  LIG  N Q
Sbjct: 355 PVLNELGKQLKKAYAENEESLSIIFTKTRASAKALVKWLNEDPDLNGIKADMLIGSGN-Q 413

Query: 763 EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
            M + +    +  F+D +  +LV TSVAEEGLDIR+CN+V R++   + + ++Q++GR+R
Sbjct: 414 GMTSTEQNRNLQLFKDKKCRILVTTSVAEEGLDIRECNMVFRYNYVTSDIGHVQTKGRSR 473

Query: 823 KPGSDYILMIERGNL 837
              +  I +I   +L
Sbjct: 474 AKFNGKIFVIVNSDL 488


>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC 1015]
          Length = 1372

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 204/477 (42%), Gaps = 99/477 (20%)

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
            +NLL  +   +++ + E   I  K   +    E C I  LP +     + +  I+ R+E+
Sbjct: 839  RNLLHRQTLAAKQPDSETPAISSKIRLIL--AENCTIDKLPYAETIFGRFISVILDRLEA 896

Query: 1368 MLLAIQLKDKINYPVPASKI---LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
             L+A +L + I   +  S I   + A+TA S Q    Y+R E  GD+ LK+ VS  LF +
Sbjct: 897  TLVATRLCETILRDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQLFFQ 956

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
            +P  HEG L+  R ++V N  L + AL  GL ++I    F P +W+AP            
Sbjct: 957  HPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP------------ 1004

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                L  ++ S+   +                           R +S+K LADVVEALIG
Sbjct: 1005 ----LISEKISLTPKQ---------------------------RTMSTKVLADVVEALIG 1033

Query: 1545 VYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALED-----AL 1599
              Y++GG  AA+  +       E + E +   + P  +P+     V  H L D      +
Sbjct: 1034 ASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAP--MPKD---GVTNHTLNDDHLMAHI 1086

Query: 1600 KIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
               F ++ LLVE++TH S +  +    YQRLEF+GDAVLD  I   L      +P G +T
Sbjct: 1087 GYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMT 1146

Query: 1659 DLRAAAVNNENFARVAVKHKL----------------------HVHL--------RHGSS 1688
             ++ A VN    A   ++  L                      H+ L         H  +
Sbjct: 1147 KIKHAVVNANLLAFFCMEFALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQT 1206

Query: 1689 ALD------RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
            A D        +R  +   L+    P +    L    A K   DI+ESI GAIF+DS
Sbjct: 1207 ARDLALSRHSSLRGSIIHGLKH--SPSYPWKSLSQLNADKFFSDIIESILGAIFIDS 1261



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 154/306 (50%), Gaps = 26/306 (8%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN 760
           ++ K +SL++  L  +   +F  +IF ++     V+ K+ +  P      + AS +G + 
Sbjct: 352 ISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVGWSG 410

Query: 761 SQ------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                   E+   +MQ +T+++FR G+  L++AT V EEG+DI  C+VV+ FD    + +
Sbjct: 411 GGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKS 470

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSR 871
           ++Q RGRAR   S Y +M    + S      +A +  E L +  IE    D   L++   
Sbjct: 471 FVQRRGRARHRQSTYAIMFATDDES------SALSKWEDLEQAMIEAYEDDERRLREAWA 524

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP--- 928
           L +++       +V+STGAV++ ++AV  ++ +C+ LP   Y+   PEF  E+ +     
Sbjct: 525 LEAINEEVVERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDDADLLR 584

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
           G  T  SC      +    +++G     + R A++     A K+L+E G  +D LLP K 
Sbjct: 585 GTVTLPSC-----VHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKR 639

Query: 988 SGEQQE 993
           + E +E
Sbjct: 640 NLELKE 645



 Score = 88.6 bits (218), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 33/226 (14%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A E  P  + R YQ+++ E + K+N I             V ++RS    LQ      L 
Sbjct: 10  AGEDAPTYRPRSYQVEMFEASLKENII-------------VTVLRSSYALLQ------LI 50

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQI 412
            FL P V L  QQ + I +    V       + + + W  Q  W       QV+V T  +
Sbjct: 51  WFLTPTVALCLQQFKFISDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAV 110

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTA 468
           L + + H  +K+  + L+I DE HH +++HP + +M +FYH        E  P + G+TA
Sbjct: 111 LADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTA 170

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMP 513
           SPV    V S     +KI   ES LD+V  T +  R EL  H   P
Sbjct: 171 SPV----VRSNRQELLKI---ESNLDAVCKTPRTHRSELMTHTHRP 209



 Score = 57.4 bits (137), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E++LR ++F ++             ++ AIT  S  +  ++ YQR EF GD+VL   ++ 
Sbjct: 905  ETILRDLEFSSIRH-----------IITAITAPS--AQSLTNYQRYEFFGDSVLKFTVSC 951

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF + N   G L++ R   V N   AR A+   L   + +      +     + E + 
Sbjct: 952  QLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAPLISEKIS 1011

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L P   +       + KVL D+VE++ GA ++D G
Sbjct: 1012 --LTPKQRTM------STKVLADVVEALIGASYIDGG 1040


>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
          Length = 1352

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 216/511 (42%), Gaps = 109/511 (21%)

Query: 1284 KQKYGVELIFKK--------QPLIRGR--GVSYCKNLLSPRFEHSEEQEGEGEEILDKTY 1333
            + +Y   ++FK+         P++      V   +NLL  +   +++ + E   I  K  
Sbjct: 785  RSRYNEPMLFKRWVVSGQDDTPIVELECDAVPKRRNLLHRQTLAAKQPDSETPAISSKIR 844

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKI---LEA 1390
             +    E C I  LP +     + +  I+ R+E+ L+A +L + I   +  S I   + A
Sbjct: 845  LIL--AENCTIDKLPYAETIFGRFISVILDRLEATLVATRLCETILRDLEFSSIRHIITA 902

Query: 1391 LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            +TA S Q    Y+R E  GD+ LK+ VS  LF ++P  HEG L+  R ++V N  L + A
Sbjct: 903  ITAPSAQSLTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGRDEIVQNSRLARAA 962

Query: 1451 LSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
            L  GL ++I    F P +W+AP                L  ++ S+   +          
Sbjct: 963  LDAGLDAFIMNKMFTPRKWSAP----------------LISEKISLTPKQ---------- 996

Query: 1511 EDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP 1570
                             R +S+K LADVVEALIG  Y++GG  AA+  +       E + 
Sbjct: 997  -----------------RTMSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNL 1037

Query: 1571 EEVGCPSRPACVPESVLRSVDFHALED-----ALKIKFKDRGLLVEAITHAS-RPSSGVS 1624
            E +   + P  +P+     V  H L D      +   F ++ LLVE++TH S +  +   
Sbjct: 1038 ENIDRTTAP--MPKD---GVTNHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQ 1092

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKL----- 1679
             YQRLEF+GDAVLD  I   L      +P G +T ++ A VN    A   ++  L     
Sbjct: 1093 SYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFALTEKRT 1152

Query: 1680 -----------------HVHL--------RHGSSALD------RQIRDFVKEVLEELLKP 1708
                             H+ L         H  +A D        +R  +   L+    P
Sbjct: 1153 NVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQTARDLALSRHSSLRGSIIHGLKH--SP 1210

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
             +    L    A K   DI+ESI GAIF+DS
Sbjct: 1211 SYPWKSLSQLNADKFFSDIIESILGAIFIDS 1241



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 154/306 (50%), Gaps = 26/306 (8%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN 760
           ++ K +SL++  L  +   +F  +IF ++     V+ K+ +  P      + AS +G + 
Sbjct: 332 ISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVGWSG 390

Query: 761 SQ------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                   E+   +MQ +T+++FR G+  L++AT V EEG+DI  C+VV+ FD    + +
Sbjct: 391 GGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKS 450

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSR 871
           ++Q RGRAR   S Y +M    + S      +A +  E L +  IE    D   L++   
Sbjct: 451 FVQRRGRARHRQSTYAIMFATDDES------SALSKWEDLEQAMIEAYEDDERRLREAWA 504

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP--- 928
           L +++       +V+STGAV++ ++AV  ++ +C+ LP   Y+   PEF  E+ +     
Sbjct: 505 LEAINEEVVERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDDADLLR 564

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
           G  T  SC      +    +++G     + R A++     A K+L+E G  +D LLP K 
Sbjct: 565 GTVTLPSC-----VHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKR 619

Query: 988 SGEQQE 993
           + E +E
Sbjct: 620 NLELKE 625



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 14/172 (8%)

Query: 349 NKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVL 406
           N   L  FL P V L  QQ + + +    V       + + + W  Q  W       QV+
Sbjct: 44  NPHKLIWFLTPTVALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVV 103

Query: 407 VMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPS 462
           V T  +L + + H  +K+  + L+I DE HH +++HP + +M +FYH        E  P 
Sbjct: 104 VSTHAVLADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPK 163

Query: 463 VFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMP 513
           + G+TASPV    V S     +KI   ES LD+V  T +  R EL  H   P
Sbjct: 164 ILGLTASPV----VRSNRQELLKI---ESNLDAVCKTPRTHRSELMTHTHRP 208



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E++LR ++F ++             ++ AIT  S  +  ++ YQR EF GD+VL   ++ 
Sbjct: 885  ETILRDLEFSSIRH-----------IITAITAPS--AQSLTNYQRYEFFGDSVLKFTVSC 931

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF + N   G L++ R   V N   AR A+   L   + +      +     + E + 
Sbjct: 932  QLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAPLISEKIS 991

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L P   +       + KVL D+VE++ GA ++D G
Sbjct: 992  --LTPKQRTM------STKVLADVVEALIGASYIDGG 1020


>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
            Full=Endoribonuclease dcl2-1; Includes: RecName:
            Full=ATP-dependent helicase dcl2-1
          Length = 1387

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 204/477 (42%), Gaps = 99/477 (20%)

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
            +NLL  +   +++ + E   I  K   +    E C I  LP +     + +  I+ R+E+
Sbjct: 854  RNLLHRQTLAAKQPDSETPAISSKIRLIL--AENCTIDKLPYAETIFGRFISVILDRLEA 911

Query: 1368 MLLAIQLKDKINYPVPASKI---LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
             L+A +L + I   +  S I   + A+TA S Q    Y+R E  GD+ LK+ VS  LF +
Sbjct: 912  TLVATRLCETILRDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQLFFQ 971

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
            +P  HEG L+  R ++V N  L + AL  GL ++I    F P +W+AP            
Sbjct: 972  HPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP------------ 1019

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                L  ++ S+   +                           R +S+K LADVVEALIG
Sbjct: 1020 ----LISEKISLTPKQ---------------------------RTMSTKVLADVVEALIG 1048

Query: 1545 VYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALED-----AL 1599
              Y++GG  AA+  +       E + E +   + P  +P+     V  H L D      +
Sbjct: 1049 ASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAP--MPKD---GVTNHTLNDDHLMAHI 1101

Query: 1600 KIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
               F ++ LLVE++TH S +  +    YQRLEF+GDAVLD  I   L      +P G +T
Sbjct: 1102 GYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMT 1161

Query: 1659 DLRAAAVNNENFARVAVKHKL----------------------HVHL--------RHGSS 1688
             ++ A VN    A   ++  L                      H+ L         H  +
Sbjct: 1162 KIKHAVVNANLLAFFCMEFALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQT 1221

Query: 1689 ALD------RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
            A D        +R  +   L+    P +    L    A K   DI+ESI GAIF+DS
Sbjct: 1222 ARDLALSRHSSLRGSIIHGLKH--SPSYPWKSLSQLNADKFFSDIIESILGAIFIDS 1276



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 18/226 (7%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A E  P  + R YQ+++ E + K+N I  + TG+GKT IA+L    I  +L+  N   L 
Sbjct: 10  AGEDAPAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALL---RIIKELE-SNPHKLI 65

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQI 412
            FL P V L  QQ + + +    V       + + + W  Q  W       QV+V T  +
Sbjct: 66  WFLTPTVALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAV 125

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTA 468
           L + + H  +K+  + L+I DE HH +++HP + +M +FYH        E  P + G+TA
Sbjct: 126 LADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTA 185

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMP 513
           SPV    V S     +KI   ES LD+V  T +  R EL  H   P
Sbjct: 186 SPV----VRSNRQELLKI---ESNLDAVCKTPRTHRSELMTHTHRP 224



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 154/306 (50%), Gaps = 26/306 (8%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN 760
           ++ K +SL++  L  +   +F  +IF ++     V+ K+ +  P      + AS +G + 
Sbjct: 367 ISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVGWSG 425

Query: 761 SQ------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                   E+   +MQ +T+++FR G+  L++AT V EEG+DI  C+VV+ FD    + +
Sbjct: 426 GGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKS 485

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSR 871
           ++Q RGRAR   S Y +M    + S      +A +  E L +  IE    D   L++   
Sbjct: 486 FVQRRGRARHRQSTYAIMFATDDES------SALSKWEDLEQAMIEAYEDDERRLREAWA 539

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP--- 928
           L +++       +V+STGAV++ ++AV  ++ +C+ LP   Y+   PEF  E+ +     
Sbjct: 540 LEAINEEVVERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDDADLLR 599

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
           G  T  SC      +    +++G     + R A++     A K+L+E G  +D LLP K 
Sbjct: 600 GTVTLPSC-----VHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKR 654

Query: 988 SGEQQE 993
           + E +E
Sbjct: 655 NLELKE 660



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E++LR ++F ++             ++ AIT  S  +  ++ YQR EF GD+VL   ++ 
Sbjct: 920  ETILRDLEFSSIRH-----------IITAITAPS--AQSLTNYQRYEFFGDSVLKFTVSC 966

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF + N   G L++ R   V N   AR A+   L   + +      +     + E + 
Sbjct: 967  QLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAPLISEKIS 1026

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L P   +       + KVL D+VE++ GA ++D G
Sbjct: 1027 --LTPKQRTM------STKVLADVVEALIGASYIDGG 1055


>gi|349603393|gb|AEP99241.1| Endoribonuclease Dicer-like protein, partial [Equus caballus]
          Length = 223

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 125/219 (57%), Gaps = 14/219 (6%)

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR 1684
            CYQRLEF+GDA+LD+LITKHL+       PG LTDLR+A VNN  FA +AVK+  H + +
Sbjct: 1    CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 60

Query: 1685 HGSSALDRQIRDFVKEVLE---------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAI 1735
              S  L   I DFV+  LE         EL +   +     D + PK +GDI ES+AGAI
Sbjct: 61   AVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAI 120

Query: 1736 FLDSGRDTSVVWQVFQPLLDPMVT--PETLPMHPVRELQERCQQQAEGLEYKASRSGNL- 1792
            ++DSG    +VWQV+ P++ P++      +P  PVREL E   + A+    + +  G + 
Sbjct: 121  YMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVR 180

Query: 1793 ATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKE 1831
             TVEV   G   GV ++   ++A+  AAR AL  LK  +
Sbjct: 181  VTVEVVGKGKFKGVGRS--YRIAKSAAARRALRSLKANQ 217



 Score = 43.5 bits (101), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            CY+R E LGDA L +++++ L+    Q   G LT +R  +V+N +    A+      Y +
Sbjct: 1    CYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFK 60

Query: 1461 A 1461
            A
Sbjct: 61   A 61


>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
          Length = 1407

 Score =  140 bits (354), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 204/477 (42%), Gaps = 99/477 (20%)

Query: 1308 KNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVES 1367
            +NLL  +   +++ + E   I  K   +    E C I  LP +     + +  I+ R+E+
Sbjct: 854  RNLLHRQTLAAKQPDSETPAISSKIRLIL--AENCTIDKLPYAETIFGRFISVILDRLEA 911

Query: 1368 MLLAIQLKDKINYPVPASKI---LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLK 1424
             L+A +L + I   +  S I   + A+TA S Q    Y+R E  GD+ LK+ VS  LF +
Sbjct: 912  TLVATRLCETILRDLEFSSIRHIITAITAPSAQSLTNYQRYEFFGDSVLKFTVSCQLFFQ 971

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKD 1484
            +P  HEG L+  R ++V N  L + AL  GL ++I    F P +W+AP            
Sbjct: 972  HPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAP------------ 1019

Query: 1485 GDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIG 1544
                L  ++ S+   +                           R +S+K LADVVEALIG
Sbjct: 1020 ----LISEKISLTPKQ---------------------------RTMSTKVLADVVEALIG 1048

Query: 1545 VYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALED-----AL 1599
              Y++GG  AA+  +       E + E +   + P  +P+     V  H L D      +
Sbjct: 1049 ASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAP--MPKD---GVTNHTLNDDHLMAHI 1101

Query: 1600 KIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
               F ++ LLVE++TH S +  +    YQRLEF+GDAVLD  I   L      +P G +T
Sbjct: 1102 GYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLDMAIMSTLLSHPREIPQGLMT 1161

Query: 1659 DLRAAAVNNENFARVAVKHKL----------------------HVHL--------RHGSS 1688
             ++ A VN    A   ++  L                      H+ L         H  +
Sbjct: 1162 KIKHAVVNANLLAFFCMEFALTEKRTNVQVTPTGTVTLNPSTEHIELWRFMRYQGAHLQT 1221

Query: 1689 ALD------RQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
            A D        +R  +   L+    P +    L    A K   DI+ESI GAIF+DS
Sbjct: 1222 ARDLALSRHSSLRGSIIHGLKH--SPSYPWKSLSQLNADKFFSDIIESILGAIFIDS 1276



 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 18/226 (7%)

Query: 295 AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           A E  P  + R YQ+++ E + K+N I  + TG+GKT IA+L    I  +L+  N   L 
Sbjct: 10  AGEDAPAYRPRSYQVEMFEASLKENIIVTMGTGSGKTHIALL---RIIKELE-SNPHKLI 65

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-DFWDAQR-WQREFDTKQVLVMTAQI 412
            FL P V L  QQ + + +    V       + + + W  Q  W       QV+V T  +
Sbjct: 66  WFLTPTVALCLQQFKFLSDNIPAVRARTLTSLDKVELWTEQPVWDAILKEMQVVVSTHAV 125

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT----SKEKRPSVFGMTA 468
           L + + H  +K+  + L+I DE HH +++HP + +M +FYH        E  P + G+TA
Sbjct: 126 LADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQDFYHPALERHGAEAVPKILGLTA 185

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMP 513
           SPV    V S     +KI   ES LD+V  T +  R EL  H   P
Sbjct: 186 SPV----VRSNRQELLKI---ESNLDAVCKTPRTHRSELMTHTHRP 224



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 154/306 (50%), Gaps = 26/306 (8%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN 760
           ++ K +SL++  L  +   +F  +IF ++     V+ K+ +  P      + AS +G + 
Sbjct: 367 ISSKFRSLLE-FLDTKGEPNFSGLIFAKQRATVSVMEKLLSIHPVTKHRFRCASFVGWSG 425

Query: 761 SQ------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                   E+   +MQ +T+++FR G+  L++AT V EEG+DI  C+VV+ FD    + +
Sbjct: 426 GGSKDVLGELLDARMQRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKS 485

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE--RTDLSHLKDTSR 871
           ++Q RGRAR   S Y +M    + S      +A +  E L +  IE    D   L++   
Sbjct: 486 FVQRRGRARHRQSTYAIMFATDDES------SALSKWEDLEQAMIEAYEDDERRLREAWA 539

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP--- 928
           L +++       +V+STGAV++ ++AV  ++ +C+ LP   Y+   PEF  E+ +     
Sbjct: 540 LEAINEEVVERLEVQSTGAVLTADTAVAHLNHFCAVLPRQPYASNEPEFSYEKDDADLLR 599

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
           G  T  SC      +    +++G     + R A++     A K+L+E G  +D LLP K 
Sbjct: 600 GTVTLPSC-----VHPGVRRIQGQRWWQTERAARKEAAFQAYKRLYEFGLLSDHLLPFKR 654

Query: 988 SGEQQE 993
           + E +E
Sbjct: 655 NLELKE 660



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 21/157 (13%)

Query: 1584 ESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITK 1643
            E++LR ++F ++             ++ AIT  S  +  ++ YQR EF GD+VL   ++ 
Sbjct: 920  ETILRDLEFSSIRH-----------IITAITAPS--AQSLTNYQRYEFFGDSVLKFTVSC 966

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE 1703
             LFF + N   G L++ R   V N   AR A+   L   + +      +     + E + 
Sbjct: 967  QLFFQHPNWHEGYLSEGRDEIVQNSRLARAALDAGLDAFIMNKMFTPRKWSAPLISEKIS 1026

Query: 1704 ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
              L P   +       + KVL D+VE++ GA ++D G
Sbjct: 1027 --LTPKQRTM------STKVLADVVEALIGASYIDGG 1055


>gi|167046030|gb|ABZ10546.1| dicer-like protein D [Placozoa sp. DMJ-2008]
          Length = 351

 Score =  140 bits (353), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 170/384 (44%), Gaps = 71/384 (18%)

Query: 1395 SCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKG 1454
            S  + F +ER E+LGD+YLK++ +   F + P   EG ++ MR   VSN  L + +  KG
Sbjct: 1    SADDFFNHERLEILGDSYLKFITTADYFFRNPNMKEGAMSLMRAINVSNSHLSRTSKLKG 60

Query: 1455 LQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            L  Y     F   +W  PG   +                            N N   ++ 
Sbjct: 61   LTLYQFNTPFKLKQWLPPGFTCI--------------------------RNNANLVANNM 94

Query: 1515 MEDGELEGDSSSYR-VLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE-- 1571
            + DG  + DS S++ V+S K ++D VE L+GVY +  G   A  L+ WIG+ +  DP   
Sbjct: 95   LTDGSKQRDSESFKQVMSVKNISDTVEGLVGVYSLASGPVDAARLLPWIGLDI--DPNVL 152

Query: 1572 ---------EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
                     E+        +   +LR+ D+         +F +   L  A TH+S  S  
Sbjct: 153  IEKDKSVNFEIPTTDEDIQLSSCILRNTDY---------QFNNFYWLRIAFTHSSVASEN 203

Query: 1623 VSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
               YQRLE++GDA L++L+ + ++       PG+++  ++    N+ F+ +A+  + + H
Sbjct: 204  ---YQRLEYLGDATLEYLLIEFVYCRKPYFGPGKISHFKSVMTRNQTFSLIAIAFQFYTH 260

Query: 1683 LR-HGSSALDRQIRDFVKEVLEELL-------KPGFNSFGLGDC---------KAPKVLG 1725
            +R H    LD  I D ++   E LL       +P    F              K PKV  
Sbjct: 261  IRCHSKLKLD--IMDSIQNFKEILLDNHQDDHQPDIGHFANLAYQLYTSNRYQKLPKVCA 318

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQV 1749
            D+ E+   AI+LD G+    VW+V
Sbjct: 319  DVFEAFIAAIYLDCGKKLRTVWKV 342


>gi|156032684|ref|XP_001585179.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980]
 gi|154699150|gb|EDN98888.1| hypothetical protein SS1G_13747 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1867

 Score =  140 bits (352), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 187/791 (23%), Positives = 316/791 (39%), Gaps = 155/791 (19%)

Query: 439  VKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPV----NLKGVSSQVDCAIKICNLESK 492
            +K HPY+ ++ +FY + + E    P +FGMTASPV    N+K  + +         LE  
Sbjct: 558  LKDHPYARIIKDFYRSDTDEPISLPKIFGMTASPVDARDNIKKAAEE---------LEGL 608

Query: 493  LDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSK 552
            L S +CT  D   ++  +    E +  YD     +     LK + +  E           
Sbjct: 609  LHSQICTAVDPSLMQYSIKGKPETIAFYDCLGPRFHTPLYLKMLPLLEENPIFQKP---- 664

Query: 553  WQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFL 612
              F+  ++A              RT                     LG WCA ++   + 
Sbjct: 665  --FIFGKEAS-------------RT---------------------LGSWCADQI---WT 685

Query: 613  TALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEI 672
              LQ +E  + +L  K ++++ SK V      L E     ++AK +  ++ F        
Sbjct: 686  FCLQEEE--SKKLQAKTEQAHHSKKVPEPLEVLEERKEQLQEAKSIVKDHIFEP------ 737

Query: 673  EEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQHTEDFRAIIFV-ER 730
                    H  S  +  D           ++ KV +L+ IL  ++Q   + + I+FV ER
Sbjct: 738  -------PHFAS--KLSDDFATKVHYSTNLSTKVVALLSILKDRFQRPTNDKCIVFVRER 788

Query: 731  VVAALVLPKVFAELPSLSFVKSASLIGHNNSQ--EMR-TFQMQE-TIAKFRDGRVTLLVA 786
              A L+   +        F+K A L+G  ++   EM  TF+ Q  T+  FR+G++  L+A
Sbjct: 789  YTARLLASLLSTPEAGTPFLKVAPLVGTTSTSAGEMHITFRSQTLTMHDFRNGKINCLIA 848

Query: 787  TSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN---------- 836
            TSVAEEGLDI  CN+V+RFDL  TV+ YIQSRGRAR   S Y  M+E  N          
Sbjct: 849  TSVAEEGLDIPDCNLVVRFDLYSTVIQYIQSRGRARHVNSRYYHMVESHNEEQRRTIKEV 908

Query: 837  LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNS 896
            L H   L++  ++    RK      ++ +     R   V  VPG       + A ++   
Sbjct: 909  LKHEKLLKHFASALPEDRKLTGNNFNMDYFLRKERTHRVYTVPG-------SNAKLTYRM 961

Query: 897  AVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSS 956
            ++ ++  +   LP  + S LR ++++    K     ++ C++ LP  AP     G   ++
Sbjct: 962  SLTVLSAFVDSLPQAQDSALRVDYVVTTVNK-----QFICEVILPEEAPIRGAIGRPATT 1016

Query: 957  MRLAQQAVCLAACKKLHEMGAFTDMLLPD-KGSGEQQEKVDQNDEGEPLPGTARHREFYP 1015
             ++A+ +     C  LH+ G     LL   K S           +G       + RE Y 
Sbjct: 1017 KQVAKCSAAFETCVILHQKGYIDQFLLSTFKKSAHMMRNALLAVDG-------KKREAYE 1069

Query: 1016 EGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNN--------GISKDPFLTQVSDFA 1067
                  L   W+  G  G     +F++ + ++    +        G+     L  +  F 
Sbjct: 1070 MSTKPTL---WLSKGEQG-----IFYMTILSLISPESLDRASQPLGLLTRSPLPVLPQFL 1121

Query: 1068 VLF-------------SSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVP 1114
            + F             +S +  E  +L   ++  + +  DV  + Y +  D +  Y  VP
Sbjct: 1122 LHFGGGRNSPVSCVPLTSSVKLEGTTLDQVNMFTLCLFQDVFSKAYKSNPD-SMPYFLVP 1180

Query: 1115 VVSD------KSVDPMNELDWDLVEKITKTD------AWTNPLQRARPDVYLGTNERT-- 1160
            +         K  +PM+ +DW+ V+ +   +       W +     +PD Y      T  
Sbjct: 1181 INCPNHTGDWKDYEPMSIIDWETVQYVQDFENKQAGKPWEHKPWLGKPDEYFKNKFITDP 1240

Query: 1161 LGGDRREYGFG 1171
              G R+ +  G
Sbjct: 1241 FDGSRKLWSVG 1251



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 187/490 (38%), Gaps = 125/490 (25%)

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            ++QP++    +S  +NLL        ++   GE    K  +V L P    + PL  ++V 
Sbjct: 1298 EEQPVVEATYISLRRNLL--------DEFDTGEVETPKKCFVILEP--LKVSPLSTTVVA 1347

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF----- 1400
             A  LP+I+ RVES L+A++  D ++  +     LEA+T  S         Q  F     
Sbjct: 1348 MAYLLPAIIHRVESYLIALEATDLLHLDIRPDLALEAVTKDSDNSEEHGEEQTNFQRGMG 1407

Query: 1401 -CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
              YER E LGD +LK   S  L+   P   E +    R  ++ N  L+  AL   L  +I
Sbjct: 1408 NNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYRFI 1467

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            ++  F    W   G                      +   K  T  N ++          
Sbjct: 1468 RSAAFNRRAWYPEG--------------------PELLRGKTATAPNTHK---------- 1497

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
                      L  K++ADV EA+IG   +      ++H  K +   V +  E V   +  
Sbjct: 1498 ----------LGDKSIADVCEAMIGAALL------SHHESKSMDNAVRAVTEVVNSDNHK 1541

Query: 1580 ACV----------PE-----SVLRSVDF-HALEDALKIKFKDRGLLVEAITHASRPSS-- 1621
            A V          P+     +    +D    +E      FK   LL  A TH + P S  
Sbjct: 1542 AIVWSDYYKLYQKPKYQTAVATAAQIDLARQVETKHPYHFKYPRLLRSASTHPAYPFSYE 1601

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
             +  YQRLEF+GDA+LD  + + +   Y         D+  A +  +  A+ A K +   
Sbjct: 1602 QIPSYQRLEFLGDALLD--MVQKMVAEYA-------CDINEALIQAKADAKRAGKSE--- 1649

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGR 1741
                          D+  +    + +P            PK L D+VE+  GAIF+DS  
Sbjct: 1650 -------------DDYAPDYWITVRQP------------PKCLPDMVEAFIGAIFVDSEY 1684

Query: 1742 DTSVVWQVFQ 1751
                V + F+
Sbjct: 1685 KFEEVEKFFE 1694



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 33/42 (78%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN 343
           E  R YQL++ E+AKK+N IA L+TG+GKT IAVLL+R I +
Sbjct: 499 ESPRDYQLELFEKAKKQNLIAVLDTGSGKTFIAVLLLRYIID 540


>gi|351713047|gb|EHB15966.1| Putative ATP-dependent RNA helicase DDX58 [Heterocephalus glaber]
          Length = 925

 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 242/557 (43%), Gaps = 86/557 (15%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   AK+ KNTI +  TG GKT +++L    IC + LQ+  Q +K   VF  
Sbjct: 243 KPRSYQLELALPAKEGKNTIIYAPTGCGKTFVSLL----ICEHHLQKFSQGRKGKVVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            +VP+  QQ  V     E+ GY V    G   ++   AQ      ++  ++++T QILLN
Sbjct: 299 NQVPVYEQQKTVFSRYFERLGYRVTGISGATAENVPVAQT----IESNDIIILTPQILLN 354

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  +  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V
Sbjct: 355 NLKNGTVPSLSIFTLMIFDECHNTSKHHPYNMIMFNYLEQKLGGSSDPLPQVIGLTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLH 530
            +    +  +    IC L + LD SV+ T+K+  E  + V    + +    K  +     
Sbjct: 414 GVGDAKNTEEAIAYICKLCASLDASVIATVKENLEELEQVVYKPQKISRKVKPRTTNRFK 473

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
             + Q+    E  A+  S                EEL  ++ + +R              
Sbjct: 474 LIISQLMKETEHMAKIIS----------------EELGYLFEIQDRV------------- 504

Query: 591 AINYALGELGQWCA--YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
              +   +  QW    +K  + F            QL  K +ES + K + L    L   
Sbjct: 505 ---FGTQKYEQWIVEVHKACRVF------------QLPDKEEESRICKAMYLYTSHL--- 546

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEE----------GELLDSHVVSGGEHVDVIIGAAVA 698
              K +  ++ SE+  ++ G + +++           E+         E +  +   ++ 
Sbjct: 547 --RKYNDTLIISEDAQMKAGLDYLKDFFNNVRAAAFDEIEQDLTRRFEEKLPELENVSMD 604

Query: 699 DGKVTPKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
                PK++ L  IL +  H     R I+FV+       L K   E  +L+F+K   L G
Sbjct: 605 PSNENPKLKDLHLILQEEYHVNPKTRTILFVKTRALVDALKKWIEENSALNFLKPGILTG 664

Query: 758 H---NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
               +N   M     +  +  FR     +L+ATSVA+EG+DI QCN+VI ++    V+  
Sbjct: 665 RGRTSNKTGMTLPAQKCVLDSFRANGDNILIATSVADEGIDIAQCNLVILYEYVGNVIKM 724

Query: 815 IQSRGRARKPGSDYILM 831
           IQSRGR R  GS   L+
Sbjct: 725 IQSRGRGRAKGSKCYLL 741


>gi|449514052|ref|XP_002194560.2| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Taeniopygia
           guttata]
          Length = 927

 Score =  140 bits (352), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 275/627 (43%), Gaps = 78/627 (12%)

Query: 227 HYNGSSRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECN 286
           +YN S   ++R+ + +D +       D   +N       S EA+ +   K  + ++ EC 
Sbjct: 178 YYNASELWNIREDNGKDVDGEM---TDASENNFETIMTFSEEAECDNLSKNLSSVS-ECI 233

Query: 287 GKVGKKSEAKEKMPEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDL 345
            +     E K      +AR YQ+++ + A   KNT+    TG+GKT +AVL+      ++
Sbjct: 234 CESSSVYEPK------KARSYQIELAQPAIDGKNTLICAPTGSGKTFVAVLICEHHFQNI 287

Query: 346 QRQNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDT 402
               +K   VFL  K+P+  QQ  V R   E++GY V   CGE   +       +     
Sbjct: 288 P-SGRKAKVVFLATKMPVYEQQKNVFRQHFERSGYFVQGICGETVANI----SVENVIQD 342

Query: 403 KQVLVMTAQILLNILRHSIIK-MEAINLLILDECHHAVKKHPYSLVMSEFY---HTTSKE 458
             ++V+T QIL+NI+   I+  +    L+I DECH+    HPY+++M+ +      +S +
Sbjct: 343 SDIIVLTPQILVNIMDKGILSSLSIFTLMIFDECHNTAGNHPYNVLMTRYLDQKFDSSAK 402

Query: 459 KRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDRKE-LEKHVPMPSEV 516
           + P + G+TAS V +    S  +    IC L S LD   + T+++ K+ L++    P   
Sbjct: 403 QLPQIVGLTAS-VGVGNAKSTKETVEHICTLCSYLDIQAISTVRENKQDLQRFANKP--- 458

Query: 517 VVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSER 576
                       +H +  +M      A   S   S+ + +          +R++Y V   
Sbjct: 459 -----------EIHIRWVKMRAQNRFADIISGLMSETEVL----------MRKIYSV--- 494

Query: 577 TESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDER-ANYQLDVKFQESYLS 635
                  + I ++  I +       W      +  L  L++ E+ ++   D+     +L 
Sbjct: 495 -------DTISQINKIYFGTQRYEHWIVSTQKKCRLLQLEDKEKESSICRDLFICTEHLR 547

Query: 636 KVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDVII 693
           K    L        +  +DA++ D+     E  TN ++ G    L+  +    + ++  +
Sbjct: 548 KFNDAL--------IISEDARIEDALAYLNEFFTN-VKNGPYTELEKQLTEKFQEIEQEL 598

Query: 694 GAAVAD-GKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK 751
            A   D     PK++ L  IL + Y +    R I+F +       L K     P LS +K
Sbjct: 599 TALSKDESNENPKLEELACILDEAYHYNPQTRTILFAKTRALVAALKKWVEANPLLSHIK 658

Query: 752 SASLIGHNNSQEM--RTFQMQE-TIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
              ++G     +    T  MQ+  +  FR D  + LL+ATSVA+EG+DI +CN+V+ ++ 
Sbjct: 659 PDVMMGKGRRDQNVGMTLPMQKGVLDAFRNDKDIRLLIATSVADEGIDITECNLVVLYEY 718

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIER 834
              V   IQ RGR R   S  IL+  +
Sbjct: 719 FGNVTKMIQVRGRGRAKDSKCILVTSK 745


>gi|328874858|gb|EGG23223.1| RNA-directed RNA polymerase [Dictyostelium fasciculatum]
          Length = 2645

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 240/540 (44%), Gaps = 69/540 (12%)

Query: 307 YQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI--CNDLQRQNK----KMLAVFLVPK 360
           YQ +   Q+  KNTI  L TG GKT IAV++++ +   N+L+++ K    K + +FL  K
Sbjct: 172 YQWESTRQSVPKNTIVVLPTGKGKTKIAVMVMKILYQLNNLKQEEKETYQKRMILFLTNK 231

Query: 361 VPLVYQQAEVIREQTGYVVGHYC---GEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           +PL  QQA+ I++    +  H     GE G    D     R++D   V+V TA I+ N +
Sbjct: 232 IPLAEQQAKAIKQDCPDLKIHLRTGEGESGNIMED-----RQYD---VIVCTADIIRNWI 283

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
            +++  M+   L+I DECHHA  +H + + ++E      +E +P + G+TASP      +
Sbjct: 284 GYNMASMKDFYLVIYDECHHATGEHVF-VKLAEEIKKLDREFQPRILGLTASPSTGGKDT 342

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
           SQ+     + N+++   ++  TI   K L    P+  E +V       + +     K+++
Sbjct: 343 SQI-----MKNIDALERNIGSTIFRPKSLPMENPLEMESIVYQFTRQEIGT----RKEID 393

Query: 538 VAVEEAAQSSSRRSKWQFMGAR--DAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
             + EA +      K+     R  D       + +  + +         +      + Y 
Sbjct: 394 SVLAEATKRLCDELKFTDPNLRYNDQNYTSFYQGLKKLDDYHRDQNPPRMTSVPSGLLYK 453

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDA 655
           L  L      +  Q+ LT++  D + + +LD  +  +Y+               + K   
Sbjct: 454 LFNLIGILQVQGIQAVLTSIVEDLQMD-ELDSYYTSAYMY-------------YMKKIQK 499

Query: 656 KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK 715
            V+D    FV  GTN      L  S   +  ++++  I  +VA+  ++            
Sbjct: 500 GVLDQ---FV--GTNP----PLYSSKYKALRDYINNFIEKSVANDTIS------------ 538

Query: 716 YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAK 775
                D R I+FV+       L K+  + P    +KS   +GH     M T +    +  
Sbjct: 539 -----DVRGIVFVKTRQGCSDLIKLLKKEPVNLHIKSKLFVGHTGEDGMSTEKQNRIMES 593

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G    LVATSV EEG+D++QCN+VI FD    +   IQ RGRAR     +  +I+ G
Sbjct: 594 FRKGDCKFLVATSVLEEGIDVQQCNMVISFDPDLNLRNMIQRRGRARSKDGKFAYLIKEG 653


>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 1607

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 142/280 (50%), Gaps = 26/280 (9%)

Query: 245 EPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG-----------KKS 293
           +PR   E+ R  ++  +F   SW  + N+        N + N K G           K S
Sbjct: 108 KPRKISEKRR--ADNAIFE--SW-VEKNKVRLSQGSSNAKSNDKAGSTELGSDPTADKPS 162

Query: 294 EAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNK 350
            ++     E  R YQ+++ E+AK+KNTIA L+TG GKTLI++LLIR I     + + Q K
Sbjct: 163 RSQGMRIIEGPREYQIELFERAKQKNTIAVLDTGTGKTLISILLIRHIIEKELETRSQGK 222

Query: 351 KMLAVF-LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVM 408
           +  A F LV KV LV+QQ + +     + +    G+     W D + WQ+      V+V 
Sbjct: 223 ENRATFFLVDKVTLVWQQTKQLHSNLDFAITGIHGDSVTHLWNDIEYWQKLRSDNMVIVC 282

Query: 409 TAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT-TSKEKRPSVFGMT 467
           TA+IL   L    I M  INLL+ DE HH  K HPY+ ++ +FY T    + RP V GMT
Sbjct: 283 TAEILYTCLARGYINMRQINLLVFDEAHHTKKNHPYARIIKDFYVTEEDPDARPRVLGMT 342

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELE 507
           ASP + K +  +   +     LE  L S + TI D + L+
Sbjct: 343 ASPFDTKTIHIEKAAS----ELERLLHSEIATIADDELLK 378



 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 166/636 (26%), Positives = 258/636 (40%), Gaps = 123/636 (19%)

Query: 1197 DVVKASGLV--PDREAMQIHNADMPTGKLMMADSCANAGDL-EGRIVTAAHSGKR-FYVE 1252
            + V +  LV  P  +A+Q  NA        M DS +   +  + + V     G R F++ 
Sbjct: 929  ETVDSHALVDWPAIDAIQTPNA--------MPDSNSEPDEFFQHKFVADPFDGSRKFFMS 980

Query: 1253 SIRYEMTAESSFPRKEGYLGPLEYS-SYADYYKQKYGVEL-----------IFKKQPLIR 1300
             +R ++T +   P  E    P   S   A++    Y V L           + K  P++ 
Sbjct: 981  RVRRDLTPQDKVP--EDVPAPAHRSWRTAEHTILNYSVSLWSKSRDAIIPRLRKDAPVVE 1038

Query: 1301 GRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPS 1360
               VS  +NLL        +Q      +  +T ++ L  E   I  LP  +V  A   P+
Sbjct: 1039 AELVSLRRNLL--------DQNDAETAVPQRTCFLVL--ETLQISRLPVEVVSMAYNFPA 1088

Query: 1361 IMRRVESMLLAIQLKDKINYPVPASKILEALTAAS--------CQETF------CYERAE 1406
            I+ R+E+ L+A+   + +   +     LEA+T  S            F       YER E
Sbjct: 1089 IIYRLENNLIALNCCNLLGLSIRPDLALEAVTKDSDNSDEPDEAPVNFQGGMGKNYERLE 1148

Query: 1407 LLGDAYLKWVVSRFLF-LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
             LGD +LK   +  LF L    + E  + RM    + N  L   AL  GLQ YI++  F 
Sbjct: 1149 FLGDCFLKMATTIALFTLMAGDEFEYHVERMTD--ICNKNLLNVALDMGLQKYIRSKSFN 1206

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
               W   G+             +L   ++                         LE D++
Sbjct: 1207 RRTWYPSGL-------------TLLKGKR-------------------------LEADAT 1228

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEG--------GKDAANHLMKWIGIQVESDPEEVGCPS 1577
                L  K++ADV EALIG  Y+ G           A   L +     ++S  E      
Sbjct: 1229 --HSLGDKSIADVCEALIGAAYLTGRERNSFDMAVKAVTLLTRSQTHTMKSFAEYRAAYV 1286

Query: 1578 RP--ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS--SGVSCYQRLEFVG 1633
            +P    VP S L+      +++ +  +FKD  LL  A  H S P     +  YQRLEF+G
Sbjct: 1287 KPEWQTVPASRLQLELARRIKEKMGYEFKDARLLRSAFMHPSYPRVYENIPSYQRLEFLG 1346

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DA+LD     HLF  + +  P  LT+ + A V+N+ +  +AV+   H H+    + L  Q
Sbjct: 1347 DALLDMTCIDHLFGRFPDRDPQWLTEHKMAMVSNQFYGCLAVELGFHRHVVCLKTQLQGQ 1406

Query: 1694 IRDFVKEVLE----------ELLKPGFN---SFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
            I D+V  + E          +  +P  +   +F +     PK L D++E+  GA+F+D+G
Sbjct: 1407 IADWVDRLGERRRRAEQAAVDAGRPAADFARNFWVDMEHPPKCLPDVLEAYVGALFVDAG 1466

Query: 1741 RDTSVV---W-QVFQPLLDPMVTPETLPM-HPVREL 1771
             D   V   W +  +P    M   +T    HPV  L
Sbjct: 1467 YDYGAVEAFWAEHVRPWFADMAAYDTYSAHHPVTHL 1502



 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 144/291 (49%), Gaps = 20/291 (6%)

Query: 699 DGKVTPKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLS----FVKSA 753
           D  ++ K   L++IL +   +E   + I+FVER   A++L  +    P++S    ++ +A
Sbjct: 492 DDGLSSKTLKLLEILEENFCSETSTQCIVFVERRDVAVLLTDLVQN-PAMSVRFPYLNAA 550

Query: 754 SLI--GHNNSQEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKT 810
            LI  G  +S    + + QE T+  FR   +  L ATS+AEEGLDI  CN+VIRFDL KT
Sbjct: 551 YLIASGRGDSHTSISNKKQEATVWSFRLRELNCLFATSIAEEGLDIPGCNLVIRFDLHKT 610

Query: 811 VLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTS 870
            + YIQSRGRAR  GS +I M E GN  H       +  E T+R+      +   L+   
Sbjct: 611 TIQYIQSRGRARMAGSVFIQMTEMGNQDHMRSWYQHQADERTMRQFCAALPEDRILQRIG 670

Query: 871 RLISVDAVPG----TVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI-LRPEFIMERH 925
             +   A+ G     VY V  TGA ++   ++ ++  Y   LP +   +   PE+ +   
Sbjct: 671 ADVD-SALHGDQGQRVYVVPETGARLTYKHSLNVLAEYVGTLPVNVEGLSFGPEYTVI-- 727

Query: 926 EKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMG 976
              GG   +  ++ LP ++P     G +  S  +A+ +   A C  L E G
Sbjct: 728 PVIGG---FQGEVLLPESSPLRSATGSIQRSKAVAKCSAAYAMCISLIEAG 775


>gi|302826370|ref|XP_002994673.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
 gi|300137177|gb|EFJ04260.1| hypothetical protein SELMODRAFT_432577 [Selaginella moellendorffii]
          Length = 176

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 106/177 (59%), Gaps = 5/177 (2%)

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN 1711
            LPPG LTDLR+AAVNN+ FAR+ V+H LH HL+HG   LD +IR FV+ V E   KP  +
Sbjct: 1    LPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGLVELDCEIRKFVQNVKE---KPDAS 57

Query: 1712 SFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVREL 1771
             F   D  APKVLGD++ESI GAIF+D+  D   +W+V  PLL P+VTP TL  HPV  L
Sbjct: 58   CFE--DLSAPKVLGDLLESITGAIFVDTNFDLERLWRVVLPLLSPLVTPATLRFHPVHIL 115

Query: 1772 QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLK 1828
             E C ++   + +  + +        + +   V  +Q   +K A+  AA   LA L+
Sbjct: 116  MELCARKGMKVSFFRTEATTTEVRVTFGEESLVETSQEKPRKSAKIDAALKMLASLQ 172


>gi|260809266|ref|XP_002599427.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
 gi|229284705|gb|EEN55439.1| hypothetical protein BRAFLDRAFT_249506 [Branchiostoma floridae]
          Length = 672

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 240/566 (42%), Gaps = 103/566 (18%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ+++ EQA + +NTI    TG+GKT +A+ + R    D+  + +    VFLV KVPL
Sbjct: 2   RGYQMELAEQALQGRNTIICAPTGSGKTRVAIKITRDHLEDVDARRR---VVFLVNKVPL 58

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ +   E     Y +    GE   D    +    ++D   V+++TAQ+L N LR  +
Sbjct: 59  VEQQYKAFSEYLSPKYDILPLSGETAADIPVGETLP-DYD---VIILTAQVLENALRDEL 114

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----PSVFGMTAS--PVNLKG 475
           I ++  ++LI DECHH  K  PY+ +M+ +     + K     P + G+TAS      KG
Sbjct: 115 ISLDTFSMLIFDECHHCQKNDPYNAIMTRYIKQKVEMKSSISLPQIIGLTASLGVGKAKG 174

Query: 476 VSSQVDCAIKIC-NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY-----DKAASLWSL 529
               V+  +  C NL++   S V   KD  EL K+   P E V        D  A + ++
Sbjct: 175 QKEAVEHILGACANLDAAWISQVVEHKD--ELRKYNQKPDEEVKPVSGRSEDPFADMINM 232

Query: 530 HEQLKQMEVAVEEAAQSSSRRS----KWQFMGARDAGAKEELRQVYGVSERTESDGAANL 585
             +  +  +A+EE      R      +W    AR     +  R    VS           
Sbjct: 233 IMEDIEGTLAIEELKPPRQREKQAYEQWVVTLARKGAILKNKR----VS----------- 277

Query: 586 IQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
               RAI+ A   L ++           A+  D R    L       YL K V+ LQ   
Sbjct: 278 ----RAIHAATTHLRKYFD-------ALAINADARTKDAL------QYLDKFVTGLQ--- 317

Query: 646 VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT-P 704
                               E G +E +E   L  H     E +        AD K + P
Sbjct: 318 --------------------EAGFDETDED--LVKHFTEAKERLQ----EYAADEKYSNP 351

Query: 705 KVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           K+  L  ++L+ Y+   D R ++F +     + L     E P L  +    L+G   S+ 
Sbjct: 352 KLDQLKYMILQAYEEKPDSRCLLFCKTRALTIALLTWMQEDPDLRKLNPGRLVGAGASES 411

Query: 764 ----------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
                     M   Q  E +  F  G   ++++TSVAEEG+DI +CN V R+D     + 
Sbjct: 412 TGGEQLVNHCMTQNQQVELLEMFTTGGNKIVISTSVAEEGIDIAKCNFVFRYDYVGNEIG 471

Query: 814 YIQSRGRARKPGSDYILMIER--GNL 837
            +Q+RGR R  GS  +L+  R  GN+
Sbjct: 472 KVQTRGRGRAEGSKSVLIAGREGGNV 497


>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
 gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
          Length = 1017

 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 233/543 (42%), Gaps = 104/543 (19%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK-----ILEALTAASC 1396
            C + P+P      A  LPSI+ R    ++A  L+  +  PV         +  AL +++ 
Sbjct: 499  CIVDPVPAPYSVFALLLPSILHRFGMAIIAETLRTTLLGPVALDSAHSLLLTRALKSSAA 558

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
                 Y+R E LGD  LK++ +  L    P+  E  LT  + ++VSN  L +  ++ GL 
Sbjct: 559  DGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLD 618

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
             ++    F  ++WA     P +  D       L +   +V E++                
Sbjct: 619  RFMITKSFTGAKWA-----PRYAGDL------LAETGPAVKEER---------------- 651

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WIGIQVESD 1569
                          SSK +AD++E+LIG  Y  GG + A   ++       WI +   + 
Sbjct: 652  --------------SSKLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANS 697

Query: 1570 PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQR 1628
                  P+      E+ L  +D   LE  +   FK + LL+EA+THAS     V C Y+R
Sbjct: 698  ILHEAAPA------EADLMGLD--VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYER 749

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN--------------NENFARVA 1674
            LEF+GDAVLD++I+K L      L   ++  +R A VN               E   + +
Sbjct: 750  LEFLGDAVLDYIISKRLHAHSPELSHQKMHAIRTATVNASFLAFRLFETTIDEETINKTS 809

Query: 1675 V-----KHKLHVHLRHGSSALD----------RQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
            +     K  +   LR GS +L+           Q+RD +   L E  +  ++ F L D  
Sbjct: 810  MRPESQKRAIWQFLRSGSPSLNANRDNALRQHEQVRDEIIIGLNEAARFPWHLFALTD-- 867

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL-----LDPMVTPETLPMHPVREL--- 1771
             PK L D+VES+ GA+++DS  D      + + L     LD ++      +HP   L   
Sbjct: 868  PPKFLSDMVESVIGAVYIDSLGDILTCEAIVRRLGILDCLDHILCNGVDCLHPKERLGHL 927

Query: 1772 --QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVG-VAQNPQKKMAQKLAARNALAVLK 1828
               +  Q    G+  + +    +   +V + G  VG VA+  ++  A+ +AA  A+ VL+
Sbjct: 928  AVDKGVQYARVGMNTEPNEGDKMYKCQVKVGGEDVGDVAEGLKRLNAETVAAWKAVGVLE 987

Query: 1829 EKE 1831
             ++
Sbjct: 988  SRK 990



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 84/146 (57%), Gaps = 10/146 (6%)

Query: 700 GKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIG 757
           G ++ K+Q LIK L+ + +H  +F  ++FVE+ V    + +V A  P +   ++  + +G
Sbjct: 127 GSMSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDLLRVGTFVG 186

Query: 758 HNNSQEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
            + + + +            Q T+  FR G++ L++ATSV EEG+D+  C++V+ F+  K
Sbjct: 187 ESENSKRKANIASISEPRNQQATLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPK 246

Query: 810 TVLAYIQSRGRARKPGSDYILMIERG 835
            + +++Q RGRARK  S Y++ + + 
Sbjct: 247 NLKSFVQRRGRARKEESKYVIFVPQA 272


>gi|157272171|gb|ABV26717.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide [Sus scrofa]
          Length = 943

 Score =  139 bits (350), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 253/578 (43%), Gaps = 68/578 (11%)

Query: 282 NQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRS 340
           NQ  +      SEA       + R YQL++   A+  KNTI    TG GKT +++L    
Sbjct: 220 NQNLSQNSCSSSEAPHTYSPLKPRNYQLELALPAQNGKNTIICAPTGCGKTFVSLL---- 275

Query: 341 IC-NDLQR--QNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQ 394
           IC + L++  Q +K   VF   ++P+  QQ  V     E+ GY V    G       D  
Sbjct: 276 ICEHHLKKFPQGRKGKVVFFAIQLPVYEQQKSVFSKHFERLGYKVAGISGATS----DTV 331

Query: 395 RWQREFDTKQVLVMTAQILLNILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYH 453
             ++  +   ++++T QIL+N L +  I  +    L+I DECH+  K+HPY+++M  +  
Sbjct: 332 CVEQIVENNDIIILTPQILVNCLTNGTIPSLSVFTLMIFDECHNTSKQHPYNVIMFNYLD 391

Query: 454 TT---SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEK 508
                S +  P V G+TAS V +    ++ +    IC L + LD SV+ T++D  +ELE+
Sbjct: 392 RKLGGSSDSLPQVIGLTAS-VGVGDAKNKAEATEYICKLCASLDTSVIATVRDNLEELEE 450

Query: 509 HVPMPSEVV--VEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEE 566
            V  P +    VE         +  QL  ME+        S  +S ++ +G    G    
Sbjct: 451 VVYKPQKFFRKVELRTTDRFKCIISQL-MMEI-------ESLAKSIFEELGTITLGG--- 499

Query: 567 LRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLD 626
                              + +++  N+   +  QW      +  +  + + ++ +    
Sbjct: 500 -------------------LFQIQNSNFGTQKYEQWIVKVQKECAVFQMPDKDKESRICK 540

Query: 627 VKFQESYLSKVVSLLQCELVEGAVSKKDA--KVVDSENGFVEGGTNEIEEGELLDSHVVS 684
             F  SY+S +       ++      KDA   + D        G +EIE+   L      
Sbjct: 541 ALF--SYMSHLRIYNDALIINEHARMKDALDYLKDFFRNIRAAGFDEIEQD--LTQRFEE 596

Query: 685 GGEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAE 743
             + ++ I   ++      PK++ L  IL  +Y    + R I+FV+       L K   E
Sbjct: 597 KLQELESI---SIDPSNENPKLRDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIKE 653

Query: 744 LPSLSFVKSASLIGHNNSQE---MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQC 799
            P LSF+K + L G   + +   M     +  +  FR D    +L+ TSVA+EG+DI QC
Sbjct: 654 NPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKILITTSVADEGIDIAQC 713

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
           N+VI ++    V+  IQ+RGR R  GS   L+    +L
Sbjct: 714 NLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTANADL 751


>gi|356460981|ref|NP_998969.2| probable ATP-dependent RNA helicase DDX58 [Sus scrofa]
 gi|224176124|dbj|BAH23574.1| DEAD box polypeptide 58 [Sus scrofa]
          Length = 943

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 253/578 (43%), Gaps = 68/578 (11%)

Query: 282 NQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRS 340
           NQ  +      SEA       + R YQL++   A+  KNTI    TG GKT +++L    
Sbjct: 220 NQNLSQNSCSSSEAPHTYSPLKPRNYQLELALPAQNGKNTIICAPTGCGKTFVSLL---- 275

Query: 341 IC-NDLQR--QNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQ 394
           IC + L++  Q +K   VF   ++P+  QQ  V     E+ GY V    G       D  
Sbjct: 276 ICEHHLKKFPQGRKGKVVFFAIQLPVYEQQKSVFSKHFERLGYKVAGISGATS----DTV 331

Query: 395 RWQREFDTKQVLVMTAQILLNILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYH 453
             ++  +   ++++T QIL+N L +  I  +    L+I DECH+  K+HPY+++M  +  
Sbjct: 332 CVEQIVENSDIIILTPQILVNCLTNGTIPSLSVFTLMIFDECHNTSKQHPYNVIMFSYLD 391

Query: 454 TT---SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEK 508
                S +  P V G+TAS V +    ++ +    IC L + LD SV+ T++D  +ELE+
Sbjct: 392 RKLGGSSDSLPQVIGLTAS-VGVGDAKNKAEATEYICKLCASLDTSVIATVRDNLEELEE 450

Query: 509 HVPMPSEVV--VEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEE 566
            V  P +    VE         +  QL  ME+        S  +S ++ +G    G    
Sbjct: 451 VVYKPQKFFRKVELRTTDRFKCIISQL-MMEI-------ESLAKSIFEELGTITLGG--- 499

Query: 567 LRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLD 626
                              + +++  N+   +  QW      +  +  + + ++ +    
Sbjct: 500 -------------------LFQIQNSNFGTQKYEQWIVKVQKECAVFQMPDKDKESRICK 540

Query: 627 VKFQESYLSKVVSLLQCELVEGAVSKKDA--KVVDSENGFVEGGTNEIEEGELLDSHVVS 684
             F  SY+S +       ++      KDA   + D        G +EIE+   L      
Sbjct: 541 ALF--SYMSHLRIYNDALIINEHARMKDALDYLKDFFRNIRAAGFDEIEQD--LTQRFEE 596

Query: 685 GGEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAE 743
             + ++ I   ++      PK++ L  IL  +Y    + R I+FV+       L K   E
Sbjct: 597 KLQELESI---SIDPSNENPKLRDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIKE 653

Query: 744 LPSLSFVKSASLIGHNNSQE---MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQC 799
            P LSF+K + L G   + +   M     +  +  FR D    +L+ TSVA+EG+DI QC
Sbjct: 654 NPKLSFLKPSILTGRGKTNQNIGMTLPAQKCVLDTFRTDKDNKILITTSVADEGIDIAQC 713

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL 837
           N+VI ++    V+  IQ+RGR R  GS   L+    +L
Sbjct: 714 NLVILYEYVGNVIKMIQTRGRGRARGSKCFLLTANADL 751


>gi|302819689|ref|XP_002991514.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
 gi|300140716|gb|EFJ07436.1| hypothetical protein SELMODRAFT_429802 [Selaginella moellendorffii]
          Length = 569

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 120/224 (53%), Gaps = 22/224 (9%)

Query: 1215 NADMPTGKLMMADSCANAGDLEGRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPL 1274
            +ADM    L  A+   ++  L+  +V   H+G+ F V  +    TA S  P K G+    
Sbjct: 157  HADM----LCTANGYVHSSALQDMVVATVHNGRLFCVTGVLENFTAASLLP-KRGF---- 207

Query: 1275 EYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLL-SPRFEHSEEQEGEGEEILDKTY 1333
               +Y DYYK KY   L    QPL++ +      NLL  P+ +H   QE           
Sbjct: 208  ---TYIDYYKDKYQRTLRLPDQPLLKAKPTHAFHNLLIRPKEDHGSRQEES--------- 255

Query: 1334 YVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTA 1393
            +V LPPELC    +   L+R    +PS + +  S + AIQL+  +   +PA+KILEA+T+
Sbjct: 256  FVELPPELCLCLEIKSGLIRSLYFVPSFLHQFTSTVCAIQLRSPLWPWIPAAKILEAITS 315

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
              C E F YE  ELLGD++LK+VV++ LFL Y +KHEGQL+  R
Sbjct: 316  KKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARR 359



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 46/259 (17%)

Query: 1609 LVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR------- 1661
            ++EAIT  S+       Y+ LE +GD+ L +++T+ LF  Y     G+L+  R       
Sbjct: 309  ILEAIT--SKKCHEEFSYESLELLGDSFLKYVVTQKLFLVYDKKHEGQLSARRNTYATKN 366

Query: 1662 ----------AAAVNNENFARVAVKHKLHVHLR----------------------HGSSA 1689
                         + ++N +  +++HKL    +                      HGS  
Sbjct: 367  SILPTGLARACLPLIHQNASLESLEHKLQYKFQNRSLLVEAITHASQPNCLLCYQHGSVE 426

Query: 1690 LDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            LD +IR FV+ V E   KP  + F   D  APKVLGD++ESI GAIF+D+  D   +W+V
Sbjct: 427  LDCEIRKFVQNVKE---KPDASCFE--DLSAPKVLGDLLESITGAIFVDTNFDLEKLWRV 481

Query: 1750 FQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQN 1809
              PLL P+VTP TL  HPVR L E C +Q   + +  + +        + +   V  +Q 
Sbjct: 482  VLPLLSPLVTPGTLRFHPVRILMELCARQGMKVSFFRTEATTTEVRVTFGEESLVETSQE 541

Query: 1810 PQKKMAQKLAARNALAVLK 1828
              +K A+  AA   LA L+
Sbjct: 542  KPRKSAKIDAALKMLASLQ 560



 Score = 45.1 bits (105), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 2/48 (4%)

Query: 1580 ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
            AC+P  + ++    +LE  L+ KF++R LLVEAITHAS+P+  + CYQ
Sbjct: 376  ACLP-LIHQNASLESLEHKLQYKFQNRSLLVEAITHASQPNC-LLCYQ 421


>gi|66804721|ref|XP_636093.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
 gi|60464394|gb|EAL62541.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
          Length = 2417

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 246/555 (44%), Gaps = 75/555 (13%)

Query: 289 VGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
           + K  E  E +P    R YQ++   Q+ + NT+  L TG GKTL++++ +  + +   + 
Sbjct: 273 IPKFKEGVEIIP----RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQD 328

Query: 349 NK----KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
           N     K +A+FLV +VPLV QQA  I   T   V    GE+      A    +E+D   
Sbjct: 329 NSCGDSKRIALFLVDRVPLVTQQAGAIEAITNLKVCKLYGEINDSRTRAFVRSKEYD--- 385

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           VLV T   L+N+L    + +     +  DE HHA  +H ++ V+ ++   T    RP + 
Sbjct: 386 VLVSTVGSLVNLLEVRHLNILDFYFITFDEVHHATGEHDFNKVV-DYIRKTDLNYRPRIL 444

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKA 523
           G+TAS V++                 S +D V  +IKD +E +   V  P+ ++      
Sbjct: 445 GLTASLVSIGN---------------STIDIVQRSIKDMEERMLSRVFKPTSLLTN---- 485

Query: 524 ASLWSLHEQLKQMEVAVEEAAQSS-SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGA 582
               S   +L+   V+ + + Q S    S  +F+        +EL Q++      + DG 
Sbjct: 486 ----STQSELQPELVSFKTSGQESLIETSICEFL----VSNSKEL-QIFLNYSDVDLDGV 536

Query: 583 ANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQ 642
                                  +   SFL AL+  ++ + QL    +  Y+     L++
Sbjct: 537 -----------------------RGNPSFLKALERLDKYSKQL----ESIYIEYTKVLIE 569

Query: 643 CELVEGAVSKKDAKVVDSENGFVEGGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVADG 700
              +   +S +  K V +    +   TN+  E   +LL+      G++ D          
Sbjct: 570 LYALLSVLSTEGPKQVLTRLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKGST 629

Query: 701 KVTPKVQSLIKILLKYQHTE---DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
           +    + SL   +      E   D R ++FVE    A  L  +  + P   ++ +  L+G
Sbjct: 630 RYRKLISSLEYAISDASDGELQKDLRILVFVETRFGASNLTSMLKKEPFQEYLHTKRLVG 689

Query: 758 HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           HN    M + + Q  I KFRDG+  L+V T+V EEG+D++ CN+VI +D   ++ + IQ 
Sbjct: 690 HNGVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQR 749

Query: 818 RGRAR-KPGSDYILM 831
           RGRAR K  S +I++
Sbjct: 750 RGRARSKNESKFIII 764


>gi|167046039|gb|ABZ10551.1| dicer 2 [Nematostella vectensis]
          Length = 1162

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 119/198 (60%), Gaps = 19/198 (9%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRP---SSGVSCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            +E +L   F+DR +L++A+TH S P   SS  S Y++LEF+GDA+LD+L+T+H+   +  
Sbjct: 938  VEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPR 997

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV--LEE----- 1704
            L PG +TDLR+A VNN + A + ++   H H+R  S AL + +R FV+ +  +EE     
Sbjct: 998  LSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVRRLSEIEEKETRP 1057

Query: 1705 -------LLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
                   LL    +  G    + PKVLGD+ E++ GA+++D GRD  + W V  PLL P+
Sbjct: 1058 DQVYSKLLLTTVEDGRGGEAIEVPKVLGDLFEALLGALYVDCGRDEELAWSVIYPLLTPI 1117

Query: 1758 VTPET--LPMHPVRELQE 1773
            +   +  LP+ P R+L E
Sbjct: 1118 IEHYSVHLPISPTRQLVE 1135



 Score = 97.4 bits (241), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 14/202 (6%)

Query: 1381 PVPASK-ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQ 1439
            P P+S  IL ALT  S  +   +ER E+ GDA++K+ +S  L+  +P  +EG+L+ +R  
Sbjct: 577  PGPSSTLILRALTTTSANDIIDHERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGL 636

Query: 1440 MVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAE 1498
             VSN  L+    S+GL   I    F P   W  PG         ++   +L    +    
Sbjct: 637  RVSNQQLFYLGRSRGLAPLILTKPFEPVGSWVPPG---FSSSSMRNVHETLDVSPQHGVN 693

Query: 1499 DKLGTD--KNYNEYEDDDMEDGELEGD-------SSSYRVLSSKTLADVVEALIGVYYVE 1549
            D L  D   + +  E  D+   E  G+         ++ V+S KT+AD +EALIG   + 
Sbjct: 694  DVLNIDDEDSLDHSEIQDISGNECRGNVEPMLLPPHTFTVISDKTVADTIEALIGACLMS 753

Query: 1550 GGKDAANHLMKWIGIQVESDPE 1571
             G +AA  LM+W+ + V S P+
Sbjct: 754  SGTNAALRLMRWLDMDVSSCPD 775



 Score = 78.6 bits (192), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 12/145 (8%)

Query: 1239 IVTAAHSGKR--FYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQ 1296
            +VT A++  R  +YV  IRY+ +  S        + P    ++ DYYK +YGV+L  + Q
Sbjct: 309  VVTTAYAPSRLRYYVADIRYDESPTSP--FPSPSVAP----TFGDYYKDRYGVDL-SRDQ 361

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQE---GEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            PL+    VS   N L PR++ S+ ++    + +    +   V L PE+C IHP+PGSL R
Sbjct: 362  PLLDVDHVSSRLNFLRPRYKTSKGKDLALPDEKSKRSQRSRVSLVPEMCSIHPIPGSLWR 421

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKI 1378
                +PSI+ RV+++L+A +L+ K+
Sbjct: 422  DITNMPSILYRVDALLIAEELRQKL 446



 Score = 51.6 bits (122), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 26/172 (15%)

Query: 1387 ILEALTAASCQETFC-----YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +L+ALT  S    +      YE+ E LGDA L ++V+R +  ++P+   G +T +R  +V
Sbjct: 952  LLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQRFPRLSPGAITDLRSAVV 1011

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            +N  L    + +    ++++   A  +                       +   + E + 
Sbjct: 1012 NNYSLACLTIQRDFHKHMRSMSMALFKVV----------------RRFVRRLSEIEEKET 1055

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
              D+ Y++     +EDG   G++    +   K L D+ EAL+G  YV+ G+D
Sbjct: 1056 RPDQVYSKLLLTTVEDGR-GGEA----IEVPKVLGDLFEALLGALYVDCGRD 1102


>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
           SRZ2]
          Length = 1683

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 136/245 (55%), Gaps = 34/245 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI--CNDLQRQN------------K 350
           R YQL++ E AK  N +  L+TG+GKTLI+VLL++ +    + QR              +
Sbjct: 71  RSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQHVHEVQNAQRPPSPPQSPAPPAPQR 130

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQ-----------DFWDAQRWQRE 399
             ++ FLV  VPLV+QQ+ VI   +   VG   GE+             D W   +W   
Sbjct: 131 PKVSFFLVNLVPLVHQQSSVIAGHSNLSVGKLYGELKDTVRGKGNKLTVDGWREPQWSAL 190

Query: 400 FDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK 459
            ++ QV+V TAQ  L+ L H  IKM+ +NLLI DE HHA+K HP+  +M ++Y    +++
Sbjct: 191 LESHQVIVSTAQCFLDALIHGFIKMDDLNLLIFDEVHHALKNHPFFRIM-KYYRLAPEKE 249

Query: 460 RPSVFGMTASPVNLKGVSSQVDCAIKICN--LESKLDSVVC-TIKDRKELEKHVPMPSEV 516
           RP +FGMTASP+     + Q D A +     + +++ +V   T++D +E+++    P E+
Sbjct: 250 RPKIFGMTASPIFTS--TGQFDDASRYLQKVMNARIHTVSKDTLQDLREVKQK---PEEL 304

Query: 517 VVEYD 521
           V+E+D
Sbjct: 305 VIEFD 309



 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 153/299 (51%), Gaps = 20/299 (6%)

Query: 705 KVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           KV  LI+ L  ++ +  DF AIIFVER   A +L ++   +  L F+    L+GH N   
Sbjct: 497 KVLRLIETLKCFEPSAADFCAIIFVERRQTATLLVELIKRVAGLEFIHPEFLLGHENGSA 556

Query: 764 ------MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
                 M      + + +FR  + T LLVATS+AEEGLDI+  N+V+RFDL    ++++Q
Sbjct: 557 NGGAPGMDWHDQVQVLNRFRRRKPTNLLVATSIAEEGLDIQAANLVVRFDLFNRHISFLQ 616

Query: 817 SRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIERTD------LSHLKD 868
           SRGRAR   S +ILM ER N SHA  + NA N+E +  K  E I   +          + 
Sbjct: 617 SRGRARAKQSRFILMAERDNASHAQAILNAFNTEASRAKWLEGIAEAEHDAGFYAQEWQH 676

Query: 869 TSRLISVDAVPGTVYQVE-STGAVVSLNSAVGLIHFYCSQLPSD--RYSILRPEFIMERH 925
             R+   +A  G     E STGA +    A  L+  Y + L S+  + ++L  +     H
Sbjct: 677 QLRVERDEAGAGEECIFEPSTGARLFPEDAPSLVSHYAATLHSEYLKDAVLAYKLDSIPH 736

Query: 926 EKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              G P+ +SC L+LP  +    +E     S + A++ V   AC++L +MG   D L+P
Sbjct: 737 -GFGVPSTFSCTLELPSTSAVRSVESGEYRSKKQAKRMVAFKACQQLRDMGELDDYLMP 794



 Score = 82.4 bits (202), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 152/379 (40%), Gaps = 37/379 (9%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +LEALT+ +   +F YER E LGD +LK V +   F  +  + E +L    + +++N+ L
Sbjct: 1147 VLEALTSPAAGSSFDYERLEFLGDTFLKLVATCHTFTTHLGRTEAELHLANKAILTNVRL 1206

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
             +           +A R    RW                   +F   + V          
Sbjct: 1207 LK-----------EARRVRLERWG------------------VFGSCRCVVRRFWAPRVG 1237

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI---- 1562
                     E  E+  D      +  KTL+D+VEAL+G   +  G D A  + +      
Sbjct: 1238 GLGGRLVLGEGEEVVVDEDECEAVKEKTLSDMVEALLGAALLTAGPDLALLVCRVFNLLP 1297

Query: 1563 -GIQVESDPEEVGCPSRPACVPE---SVLRSVDFHALEDALKIKFKDRGLLVEAITHASR 1618
              I   +   ++    +   + E   S +       L+      ++   L +EA TH S 
Sbjct: 1298 ASITTLASFNDLLLTLKQQAIAENWQSRISRSGLDHLQSLFDHTYRYPHLGLEAFTHPSL 1357

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
             +S +  YQRLEF+GDA LD  I + +F       PG +T  +    +N     + V+  
Sbjct: 1358 LASVLPSYQRLEFLGDAWLDFCIVRMIFAEGEERSPGEMTAHKGVLASNGALGALGVRLG 1417

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLD 1738
            LH  +   S+ L   I  +   +     K  + +        PK + D+VE+   +I +D
Sbjct: 1418 LHAFVASDSAVLGDSIARYAAALGSVDEKGQYWTRLARGVVVPKAVADVVEASFASIVVD 1477

Query: 1739 SGRDTSVVWQVFQPLLDPM 1757
            SG D  VV +VF+ +  P 
Sbjct: 1478 SGFDARVVQRVFELMCVPF 1496


>gi|14475569|emb|CAC41974.1| putative RNA dependent RNA polymerase [Dictyostelium discoideum]
          Length = 1883

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 246/555 (44%), Gaps = 75/555 (13%)

Query: 289 VGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
           + K  E  E +P    R YQ++   Q+ + NT+  L TG GKTL++++ +  + +   + 
Sbjct: 20  IPKFKEGVEIIP----RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQD 75

Query: 349 NK----KMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
           N     K +A+FLV +VPLV QQA  I   T   V    GE+      A    +E+D   
Sbjct: 76  NSCGDSKRIALFLVDRVPLVTQQAGAIEAITNLKVCKLYGEINDSRTRAFVRSKEYD--- 132

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           VLV T   L+N+L    + +     +  DE HHA  +H ++ V+ ++   T    RP + 
Sbjct: 133 VLVSTVGSLVNLLEVRHLNILDFYFITFDEVHHATGEHDFNKVV-DYIRKTDLNYRPRIL 191

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKA 523
           G+TAS V++                 S +D V  +IKD +E +   V  P+ ++      
Sbjct: 192 GLTASLVSIGN---------------STIDIVQRSIKDMEERMLSRVFKPTSLLTN---- 232

Query: 524 ASLWSLHEQLKQMEVAVEEAAQSS-SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGA 582
               S   +L+   V+ + + Q S    S  +F+        +EL Q++      + DG 
Sbjct: 233 ----STQSELQPELVSFKTSGQESLIETSICEFL----VSNSKEL-QIFLNYSDVDLDGV 283

Query: 583 ANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQ 642
                                  +   SFL AL+  ++ + QL    +  Y+     L++
Sbjct: 284 -----------------------RGNPSFLKALERLDKYSKQL----ESIYIEYTKVLIE 316

Query: 643 CELVEGAVSKKDAKVVDSENGFVEGGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVADG 700
              +   +S +  K V +    +   TN+  E   +LL+      G++ D          
Sbjct: 317 LYALLSVLSTEGPKQVLTRLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKGST 376

Query: 701 KVTPKVQSLIKILLKYQHTE---DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
           +    + SL   +      E   D R ++FVE    A  L  +  + P   ++ +  L+G
Sbjct: 377 RYRKLISSLEYAISDASDGELQKDLRILVFVETRFGASNLTSMLKKEPFQEYLHTKRLVG 436

Query: 758 HNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
           HN    M + + Q  I KFRDG+  L+V T+V EEG+D++ CN+VI +D   ++ + IQ 
Sbjct: 437 HNGVDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLIQR 496

Query: 818 RGRAR-KPGSDYILM 831
           RGRAR K  S +I++
Sbjct: 497 RGRARSKNESKFIII 511


>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
           206040]
          Length = 1456

 Score =  138 bits (348), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 24/231 (10%)

Query: 289 VGKKSEAKEKMPEEQ------------ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVL 336
           +G + E  EK+P ++             R YQ+D+ E+AK +NTI  L+TG GKTLIA L
Sbjct: 22  MGSRLERLEKIPVDKLLRGSSERIIASPREYQIDLYERAKNENTIVVLDTGTGKTLIAAL 81

Query: 337 LIRSICNDLQRQNKKM-----LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFW 391
           L+R +  +++ +N++       A F+V KV L +QQ  V+     + +G   G+M  D  
Sbjct: 82  LLRRVL-EVEIENREKGYTPKSAFFIVEKVALCFQQYAVLTSNLEFPIGKIFGDMNGDIG 140

Query: 392 DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEF 451
           D + W+++F      V TAQ LL++     I M+ +NLL+ DE HH  K H Y+ +M   
Sbjct: 141 DPEFWRQQFSENMAFVCTAQTLLSMFGAGFISMDRVNLLVFDEAHHTKKNHAYARIME-- 198

Query: 452 YHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD 502
           Y+   + +RP + GMTASPV+    +S+ D  I   +LE  L   + TI D
Sbjct: 199 YYPRWENERPRILGMTASPVD----TSKGDVRIAAMDLEEMLCGKIATISD 245



 Score =  127 bits (318), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 227/569 (39%), Gaps = 112/569 (19%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            +QP++    +S  +N L   F   E          D T YV L P    + PLP  +V  
Sbjct: 875  EQPVVNAELLSIRRNFLDEYFIGDEA---------DNTCYVILEP--LVVSPLPIDIVFM 923

Query: 1355 AQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------ 1400
            A  LP +M R++S+L+A ++   ++  +     LEA+T  S         Q  F      
Sbjct: 924  ALLLPVVMYRIDSVLIASEVCSLVDLAIRPELALEAITKDSFNTEEHGEDQVDFQPGMGK 983

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             YER E LGD +LK   +  ++  YP ++E +    R  M++N  L+ +A+ K L  YI+
Sbjct: 984  NYERLEFLGDTFLKMATTISVYTLYPHENEFEYHVKRMLMLNNKNLFTHAIEKKLPGYIR 1043

Query: 1461 ADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL 1520
               F    W                                          D  ++ G+ 
Sbjct: 1044 TRAFDRRTWYP---------------------------------------SDLRLKKGKA 1064

Query: 1521 EGDSSSYRVLSSKTLADVVEALIGVYYVEG-GKDAANHLMKWIGIQVESDPEEV------ 1573
                +    LS K++ADV EALIG  Y+ G   ++ +  +K +   V S+   +      
Sbjct: 1065 TKAKARRHCLSHKSIADVCEALIGAAYLTGKSNNSMDMAVKAVTAMVSSENHTMINFSDY 1124

Query: 1574 ----GCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR--PSSGVSCYQ 1627
                  P      P +  R++    + + +  +F+   LL  A  H+S          YQ
Sbjct: 1125 RARYTTPEWHTYEPNAAQRNM-VERIAEIIGYRFQCAPLLRSAFKHSSYVYEEKIRRDYQ 1183

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            +LEF+GDA++D ++   L+  +    P  LT+ + A V+N+    + VK  L  HL   +
Sbjct: 1184 QLEFLGDALIDMVVVDFLYTRFPEADPKWLTEHKMAMVSNQFLGFLCVKLGLSKHLMLAT 1243

Query: 1688 SALDRQIRDFVKEVLEELL------KPGFNSFGLGDCKA-------------------PK 1722
            S+L   IR++  E  E         KP  N    G  K                    PK
Sbjct: 1244 SSLHSLIREYTAEAKEAEEKAKGCRKPHGNKAAAGSDKGASAEAPSVTLDFWAEIQQPPK 1303

Query: 1723 VLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-----PMHPVRELQERCQQ 1777
             L D+VE++ GA+F+DSG   SVV   F   + P     +L       HPV  L    Q+
Sbjct: 1304 ALADVVEALVGAMFVDSGYSFSVVQDFFAKFIQPYFEDMSLLSSFASNHPVTVLIHALQE 1363

Query: 1778 QAEGLEYKASRSGNLATVEVYIDGVQVGV 1806
                 ++K     ++A+V    D   V +
Sbjct: 1364 DYRCTQWKL----HMASVPPSTDDAGVAI 1388



 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 149/289 (51%), Gaps = 15/289 (5%)

Query: 702 VTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF--VKSASLIGH 758
           ++PKV++L +IL   +      R I+FVE+   A +L  +F + P +S   +++A +IG 
Sbjct: 349 LSPKVKTLHQILGNAFSQRLSKRCIVFVEQRTTAFLLADLFKQ-PGMSIPGMRTAYMIGS 407

Query: 759 NNSQEMRTFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
           N +       +++   ++ KF+ G    L ATSVAEEG+D+ +C+V++RFDL  + + YI
Sbjct: 408 NATSGAANMSLKDQVVSLQKFKRGEFNCLFATSVAEEGIDVPECDVIVRFDLCVSAIQYI 467

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           QS+GRAR+    Y+ ++E  N+ H    + A+++   L++      +   ++D      V
Sbjct: 468 QSKGRARQSSFLYVTLVESKNIHHHRKFQQAKSAAFELQRFCRALPEDRKVEDFDVRPEV 527

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
                T+   ES G +  ++S   L   Y S L  D   + + E++++  +K     ++ 
Sbjct: 528 LQSCETIIATESGGGLKLVDSLACLAK-YTSSLSRD--GLQKIEYVVKSDKK-----QFI 579

Query: 936 CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             + LP  +P + ++G    + +LA+ +    AC+ L E G     L P
Sbjct: 580 ASVVLPDGSPIKTIQGISQRTKQLARCSAAFEACRILIEKGYIDKHLRP 628


>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
            Full=Endoribonuclease DCL2; Includes: RecName:
            Full=ATP-dependent helicase DCL2
          Length = 1399

 Score =  138 bits (347), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 232/543 (42%), Gaps = 104/543 (19%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK-----ILEALTAASC 1396
            C + P+P      A  LPSI+ R    ++A  L+  +  PV         +  AL +++ 
Sbjct: 881  CIVDPVPAPYSVFALLLPSILHRFGMAIIAETLRTTLLGPVALDSAHSLLLTRALKSSAA 940

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
                 Y+R E LGD  LK++ +  L    P+  E  LT  + ++VSN  L +  ++ GL 
Sbjct: 941  DGNDNYQRLEFLGDCILKFIATVHLMAANPKWPESHLTAKKGRIVSNGFLARATIAAGLD 1000

Query: 1457 SYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
             ++    F  ++WA     P +  D       L +   +V E++                
Sbjct: 1001 RFMITKSFTGAKWA-----PRYAGDL------LAETGPAVKEER---------------- 1033

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN-------HLMKWIGIQVESD 1569
                          SSK +AD++E+LIG  Y  GG + A         L  WI +   + 
Sbjct: 1034 --------------SSKLIADIIESLIGACYTVGGFEKAVLCVQTLLPLEPWISVPAANS 1079

Query: 1570 PEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC-YQR 1628
                  P+      E+ L  +D   LE  +   FK + LL+EA+THAS     V C Y+R
Sbjct: 1080 ILHEAAPA------EADLMGLD--VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYER 1131

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN--------------NENFARVA 1674
            LEF+GDAVLD++I+K L      L   ++  +R A VN               E   + +
Sbjct: 1132 LEFLGDAVLDYIISKRLHAHSPELSHQKMHAIRTATVNASFLAFRLFETTIDEETINKTS 1191

Query: 1675 V-----KHKLHVHLRHGSSALD----------RQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
            +     K  +   LR GS +L+           Q+RD +   L E  +  ++ F L D  
Sbjct: 1192 MRPESQKRAIWQFLRSGSPSLNANRDNALRQHEQVRDEIIIGLNEAARFPWHLFALTD-- 1249

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL-----LDPMVTPETLPMHPVREL--- 1771
             PK L D+VES+ GA+++DS  D      + + L     LD ++      +HP   L   
Sbjct: 1250 PPKFLSDMVESVIGAVYIDSLGDILTCEAIVRRLGILDCLDHILCNGVDCLHPKERLGHL 1309

Query: 1772 --QERCQQQAEGLEYKASRSGNLATVEVYIDGVQVG-VAQNPQKKMAQKLAARNALAVLK 1828
               +  Q    G+  + +    +   +V + G  VG VA+  ++  A+ +AA  A+ VL+
Sbjct: 1310 AVDKGVQYARVGMNTEPNEGDKMYKCQVKVGGEDVGDVAEGLKRLNAETVAAWKAVGVLE 1369

Query: 1829 EKE 1831
             ++
Sbjct: 1370 SRK 1372



 Score =  108 bits (269), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 11/219 (5%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ +++E++ + N I  ++TG+GKT IA+   R+   +L+      +  FL P V L 
Sbjct: 12  RSYQAEMVEESMQSNIICVMDTGSGKTHIAIDRTRA---ELEICRPDKIVWFLAPTVTLC 68

Query: 365 YQQAEVIREQT-GYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            QQ  V +    GY +    G+   D W D   W       ++++ T Q+LL+ L H  +
Sbjct: 69  EQQFAVFKSNLPGYGIQLLSGKDNLDHWTDQGVWDDVLLNIRIVLSTHQVLLDALSHGFV 128

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
           KM  ++LLI DE HH   KHP   +MS+FY      + P + G++ASP+    V+S+   
Sbjct: 129 KMRNLSLLIFDEAHHCSLKHPAHRIMSDFYKPRIGTELPRILGLSASPIKTAKVTSE--- 185

Query: 483 AIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEY 520
              +  +E  L + V T K  R EL ++V  P  + ++Y
Sbjct: 186 --DLQQIERNLCATVKTPKLHRSELLRYVHRPHLMRIDY 222



 Score =  104 bits (259), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 32/340 (9%)

Query: 700  GKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIG 757
            G ++ K+Q LIK L+ + +H  +F  ++FVE+ V    + +V A  P +   ++  + +G
Sbjct: 359  GSMSHKLQLLIKFLVAEAKHDPEFTCLVFVEQRVWVACIAEVLAIHPETRDLLRVGTFVG 418

Query: 758  HNNSQEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
             + + + +            Q T+  FR G++ L++ATSV EEG+D+  C++V+ F+  K
Sbjct: 419  ESENSKRKANIASISEPRNQQATLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPK 478

Query: 810  TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT 869
             + +++Q RGRARK  S Y++ + +          + ++ EE ++   ++  DL  +K  
Sbjct: 479  NLKSFVQRRGRARKEESKYVIFVPQAGRRRDP--ESWQSLEEGMKAAYLD--DLRQVKLA 534

Query: 870  SRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPG 929
            +            ++V+STGA+++L++A   +H +CS L +  Y   RP+F      +PG
Sbjct: 535  TEKEQQSETGHRNFEVKSTGALLTLDNASQHLHHFCSILGAGPYIDNRPQFEFTE-IRPG 593

Query: 930  GPTEYSCKLQLPCNAPFEKLEG---PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
              T    ++ LP     E          ++ ++A+Q     A K L+  G   D LLP +
Sbjct: 594  VIT---ARVILPLTVDPEVRTACALDTWATEKMAKQDAAFEAYKALYVAGLVNDNLLPAR 650

Query: 987  GSGEQQ-----------EKVDQNDEGEPLPGTARHREFYP 1015
               + +             V  +   +P P  ARH++  P
Sbjct: 651  QEADDELSELQIPDHRPSLVPVSPTLDPWPLFARHQQQNP 690


>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1460

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 209/451 (46%), Gaps = 61/451 (13%)

Query: 1323 GEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP- 1381
             + E  + + + + LP +LC    +P S+ +    LPS+ R +   L A  L  ++++P 
Sbjct: 880  SKSESTVVQPHRILLPLKLCKGTHIPRSMWKVFSYLPSLTRLLHDSLQATTLFKRLDFPT 939

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +     ++ALT       + Y+  E LGDA+LK   S  ++L + +K EG ++ +R + V
Sbjct: 940  ISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHVYLSHLKKGEGDMSHVRSRSV 999

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
             N  L + A+   L + I + RF   R                                 
Sbjct: 1000 DNAYLRRKAIQANLPASILSQRFRTDR--------------------------------- 1026

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL--- 1558
                    + D   EDG+   + +  R +  + L+DVVEAL+G  ++ GG +    +   
Sbjct: 1027 --------FRDPQTEDGKELPNGNFSRKIPKRVLSDVVEALLGAGFLTGGIELGLKIGTA 1078

Query: 1559 --MKWIGIQVESD-PEEVGCPS--RPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
              + + G    S+ P  +G  S    A  P ++L+     ALE+ +   FK++ LLV+A+
Sbjct: 1079 LDLCFGGTAPWSERPVNIGLESITHDALEPSTLLKC---QALEEKIGYVFKEKLLLVQAL 1135

Query: 1614 THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            TH S  S   +CY+R E++GDAV+D  I +H +  + +     LT  RA  V+N +   +
Sbjct: 1136 THRSANSFMTNCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFL 1195

Query: 1674 AVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKAPKVLGDI 1727
            A+K   L   + H S   ++   + ++ +     +EE      N F + D   PK+L D+
Sbjct: 1196 ALKKLGLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFD--PPKILNDV 1253

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            +E+I GA+F+DSG +    ++    + + ++
Sbjct: 1254 LEAIVGAVFVDSGFNLQSAYRTLDIIFEDVI 1284



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 9/225 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++LE+AKK+N I   +TG GKT +A+ LI  I        +   +  FL P  PL
Sbjct: 23  RLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIAAQSPANHDDHRIQAFLAPTRPL 82

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +QQAE I++     V  Y G++  + W+  +W  E +   V+V TAQI  +++     K
Sbjct: 83  AHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVIVSTAQIFYDLISKGYWK 142

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE---KRPSVFGMTASPV-NLKGVSSQ 479
           +E ++LLI DE HH  K H Y+ +M   YH  +K+   + P + G+TASP+ N K +  +
Sbjct: 143 LEDVSLLIFDEAHHCRKNHIYNQIMRSHYHRLAKDPTVRLPKILGLTASPIWNYKDL-ER 201

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKA 523
            D  IK  +L+S L + +  +K   E + +H   P+E VV ++ +
Sbjct: 202 ADSDIK--SLQSALAAQIYEVKTHTEDVCQHNFKPNEKVVYFEPS 244



 Score =  117 bits (293), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 162/342 (47%), Gaps = 34/342 (9%)

Query: 667 GGTNEIEEGELLDSHVVSGGEHV-----DVIIGAAVADGKVTPKVQSLIKILLKYQ---H 718
           G +N+   G LLD +       V     +++    + + + + KV  L KIL+ Y+   +
Sbjct: 301 GASNQAMPGRLLDPNKQKQIREVIQELEELVNIDDIPETQFSSKVAVLNKILVSYKEKDN 360

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGH--NNSQEMRTFQM-----Q 770
            ++F  I+FVER   A +LP +      L  F++  +L GH   N  ++   +M      
Sbjct: 361 HDNFLCIVFVERRQHAQLLPFLLERNAQLKGFLRPTALTGHAGGNVNDLIGIKMDSRTQN 420

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           + +AKFR G   L +ATSVAEEGLD R C VVIRFDL  T   YIQSRGRAR   SDYI+
Sbjct: 421 KAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 480

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE-STG 889
           M+  G  +   +L      EE L+     R +   +++     +    P  + Q+     
Sbjct: 481 MLPNGTTN--KYLEFT-GKEEQLKAALYNRPEDELIEEGEEEWT----PQLICQLAGGKE 533

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRY-SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE- 947
           ++++ ++A  L++  C  +P D +  ++ P++     E       + C++ LP  A    
Sbjct: 534 SILTYSAATSLLNDVCQLIPPDEFLPVVAPQY-----EITWLGDNFQCQVTLPPMAALHP 588

Query: 948 ---KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                 G   ++ + A+++    ACK L E+       LP +
Sbjct: 589 SQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLNQHFLPQR 630


>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
          Length = 1752

 Score =  137 bits (346), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 228/548 (41%), Gaps = 73/548 (13%)

Query: 1235 LEGRIVT---AAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQ------ 1285
            L+GR +      HS   +  ESIR ++   S  P   G  G    + +   Y +      
Sbjct: 1009 LKGRTLVKQHGYHSHSLYQFESIRSDLCPNS--PLSSGAAGETYLTQHMKMYARHQASAD 1066

Query: 1286 KYGVELI---FKKQPLIRGRGVSYCKNLLSPRFEHS---EEQEGEGEEILDKTYYVFLPP 1339
            ++ VE++      QPL+  R +    NLLSP    S        +G  ++   +Y     
Sbjct: 1067 EHEVEVLAAQLANQPLLSVRKLPKISNLLSPPPSISFSATPATTQGARLIVPYFYA---- 1122

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLK-DKINYPVPASKILEALTAASCQE 1398
                +HPLP +L+R    LPSI  R + +LLA     D +   +   K+LEALT+ S   
Sbjct: 1123 ----LHPLPSTLLRSILLLPSIFTRYDQLLLAQACNNDLLEGRLDNDKVLEALTSPSAGS 1178

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
             F YER E LGD +LK + +   F  +  + E +L    + +V+N+ L + A   GL+ Y
Sbjct: 1179 AFDYERLEFLGDTFLKLIATCHTFTTHLGRTEAELHMANKGIVTNVRLLKEAKRLGLEKY 1238

Query: 1459 --IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDME 1516
              + +    P R+ AP +  V    T D                                
Sbjct: 1239 AILPSCNLLPRRFTAPVICNVGGALTNDPSMD---------------------------H 1271

Query: 1517 DGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCP 1576
            DG+++       V+  KTL+D+VE+LIG   +     + +       +        V C 
Sbjct: 1272 DGQVD-------VVKEKTLSDIVESLIGAALLSPSSSSPSSSSP-FFLLPFLSFLHVYCA 1323

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAV 1636
             +      S L       L+      ++   L +E+ TH S  +S +  YQRLEF+GDA 
Sbjct: 1324 FQRNW--SSRLNPPSLRHLQSLFSHTYRYPHLALESFTHPSLLASILPSYQRLEFLGDAW 1381

Query: 1637 LDHLITKHLFF---SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            +D  I   ++        L PG +T L+    +N   + + VK  LH  +   S+ L   
Sbjct: 1382 IDFFIVSRIYTEGGGLVVLDPGEMTALKGVLASNAALSALGVKLGLHKFIASNSAVLVES 1441

Query: 1694 IRDFVKEVLEELLKPGFNS----FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
            I  + K  LE++L+ G          G  + PK + D+VE+   +I +DSG D     +V
Sbjct: 1442 IAKYGKG-LEKVLRKGGGEGQYWTKAGMVQVPKAVADVVEASFASIVVDSGFDQDTAQRV 1500

Query: 1750 FQPLLDPM 1757
            F  +  P 
Sbjct: 1501 FGRIFTPF 1508



 Score =  133 bits (335), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 134/248 (54%), Gaps = 36/248 (14%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR------------SICNDLQRQN--- 349
           R YQL++ E AK  N +  L+TG+GKTLI+VLL++            S+      Q    
Sbjct: 83  RSYQLELAELAKAGNVLVCLDTGSGKTLISVLLLQYVHQHSSPPPTPSLAPSSGAQPFSS 142

Query: 350 ---KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEM-----------GQDFWDAQR 395
              ++ +A FLV  VPLV+QQ+ VI   +   VG   GE+             D W + +
Sbjct: 143 PAPQRKVAFFLVNLVPLVHQQSSVIAGNSRLSVGKLYGELKDSLRSKSSQLAVDDWRSPQ 202

Query: 396 WQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT 455
           W     + QV+V TAQ  L+ L H  IKM  +NLLI DE HHA+K HP+  +M ++Y   
Sbjct: 203 WSALLASHQVIVSTAQCFLDALIHGFIKMSDLNLLIFDEVHHALKNHPFFRIM-KYYRLA 261

Query: 456 SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK--DRKELEKHVPMP 513
            +E+RP +FGMTASP+   G S + D A +   L+  +D+ + T+     +ELE+    P
Sbjct: 262 KEEERPKIFGMTASPI-FTG-SGRFDEASQY--LQRAMDARIHTVSRGALRELEEVKRRP 317

Query: 514 SEVVVEYD 521
            E+VVE++
Sbjct: 318 EEMVVEFE 325



 Score =  128 bits (321), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 29/307 (9%)

Query: 703 TPKVQSLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN- 760
           +PK+  LI++L  ++ ++  F  IIFVER   A +L ++   +P L F+    L+GH+N 
Sbjct: 510 SPKLLRLIELLHCFEPSKSSFCGIIFVERRQTATLLVELVKRIPGLEFIHPEFLLGHDNG 569

Query: 761 -----SQEMRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                +  M      + + +FR  + T LL+ATS+AEEGLDI+  N+VIRFDL    +++
Sbjct: 570 AANGGAPGMDWHDQVQVLNRFRRRKPTNLLIATSIAEEGLDIQAANLVIRFDLFNRHISF 629

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHL------KD 868
           +QSRGRAR   S +ILM E+GN  HA  + NA  +E   R + ++     HL      +D
Sbjct: 630 LQSRGRARAKESRFILMAEKGNQEHAGTILNAFKTEAN-RAKWLDGIAEPHLAMPDWGED 688

Query: 869 TSRLISVDAVPGTVYQVE-----------STGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
             + + +D        VE           +TGA +    A  L+  Y + L S+    L+
Sbjct: 689 WQQKLRIDTDSQEGVGVEGGEEEKCMFEPTTGARLFPEDAPTLVSHYAASLHSE---YLK 745

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
              +  R EK  G   Y   L+LP  A    +E   C S + A++     AC++L  +G 
Sbjct: 746 DAVLAYRIEKVDGLPSYKAVLELPSTAAVRSVESDGCRSKKAAKRMAAFRACQQLRALGE 805

Query: 978 FTDMLLP 984
             + L+P
Sbjct: 806 LDEWLMP 812


>gi|410978420|ref|XP_003995589.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Felis catus]
          Length = 924

 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 239/549 (43%), Gaps = 69/549 (12%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQL++   AK+ KNTI    TG GKT +++L+      +   Q +K   VF   ++
Sbjct: 241 KPRNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLKNFP-QGQKGKVVFFAVQL 299

Query: 362 PLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P+  QQ  V     E+ GY V    G   ++    Q      +   ++++T QIL+N L+
Sbjct: 300 PVYEQQKSVFSNYFERLGYKVAGVSGATSENVSVKQI----VENNDIIILTPQILVNSLK 355

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVNLK 474
           +  I  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V + 
Sbjct: 356 NGTIPSLSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTAS-VGIG 414

Query: 475 GVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQ 532
              S  +    IC L + LD SV+ T+KD  +ELE+ V  P +   +             
Sbjct: 415 DAKSTAEAVEYICRLCASLDTSVIATVKDNLEELEEIVYKPQKFFRK------------- 461

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAI 592
                  VE       +    Q M   ++ AK    ++ G+S+             +R  
Sbjct: 462 -------VESRTTDRFKCIISQLMRETESLAKSIFDEIEGISQ-------------IRNR 501

Query: 593 NYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGA 649
            +   +  QW      Q   T         +QL  K +ES + K + L    L    +  
Sbjct: 502 EFGTQKYEQWIV--TVQKACTV--------FQLPDKDEESRICKALFLYTSHLRKYNDAL 551

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEG--ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
           +  + A++ D+ +   +  TN    G  E+         E +  +   ++      PK++
Sbjct: 552 IINEHARMKDALDYLKDFFTNVRAAGFDEIEQDLTRRFEEKLQKLESVSMDPSNENPKLK 611

Query: 708 SLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NNSQE 763
            L  IL  +Y    + R I+FV+       L K   E   LSF+K   L G    N +  
Sbjct: 612 DLCFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFLKPGILTGRGKTNQNTG 671

Query: 764 MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           M     +  +  FR +G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+RGR R
Sbjct: 672 MTLPAQKCALDAFRTNGDKKILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTRGRGR 731

Query: 823 KPGSDYILM 831
             GS   L+
Sbjct: 732 ARGSKCFLL 740


>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1403

 Score =  137 bits (345), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 9/231 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAV-LLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++LE+AKK+N I   +TG GKTL+A+ L++ +        N   +  FLVP  PL
Sbjct: 28  RLYQAELLEEAKKRNIIIRADTGTGKTLVALHLIVWTAAQTESAPNGHQIQAFLVPTRPL 87

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V+QQAE I+ Q+   V  Y G++  D W+  +W+       V+V TAQI  +++     K
Sbjct: 88  VHQQAEYIQSQSTLRVKAYAGDLPADLWNVDKWRSGLKEVDVIVSTAQIFHDLISKGFWK 147

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK---EKRPSVFGMTASPV-NLKGVSSQ 479
            E I+LLI DE HH  K H Y+ +M   YH  +K   ++ P + G+TASP+ N K +   
Sbjct: 148 FEDISLLIFDEAHHCRKDHVYNQIMRSHYHRLAKDPAQRLPKILGLTASPIWNYKDLER- 206

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAASLWSL 529
                 I +L+  L + +C +K   E + +H   P+E  V +D + +   L
Sbjct: 207 --AEKDIKDLQCSLAAQICEVKRHTEDVSQHNFKPNERAVYFDPSPAFQKL 255



 Score =  131 bits (330), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 178/362 (49%), Gaps = 44/362 (12%)

Query: 664 FVEGGTNEIEEGELLDSHVVSGGEHV-----DVIIGAAVADGKVTPKVQSLIKILLKYQH 718
            V GG N++  G LLD +     + V     +++    + + +++ KV +L K+L+KY+ 
Sbjct: 303 LVVGGPNQLMSGRLLDPNHQQKVKQVTNQLEELLSINDIPENQLSSKVIALNKLLVKYKE 362

Query: 719 TE---DFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQE-------MRTF 767
            +   DF  I+FVER     +L  +      L  F++  +L GH    E       M + 
Sbjct: 363 EDGRDDFLCIVFVERRQHTQLLFALLERNTQLKGFIRPGALAGHGGGNENDLLGIKMDSR 422

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSD 827
              +T+AKFR G   L +ATSVAEEGLD R C VVIRFD   T   YIQSRGRAR   SD
Sbjct: 423 AQNKTVAKFRTGEHNLTIATSVAEEGLDFRSCRVVIRFDQITTWKGYIQSRGRARARNSD 482

Query: 828 YILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI---SVDAVPGTVYQ 884
           YI+M+     S + +L  +   E+ L+    +R D       + LI   +V+  P  + +
Sbjct: 483 YIVMLPTD--SSSKYLAFS-GKEDELKAALYDRPD-------NELIGGGAVEPTPQLICR 532

Query: 885 V-ESTGAVVSLNSAVGLIHFYCSQLPSDRY-SILRPEF-IMERHEKPGGPTEYSCKLQLP 941
           + +   ++++  SA GL++  C  +P D +  +L PE+ IM   E       +  ++ LP
Sbjct: 533 LADGNDSILTYGSAPGLLNDVCQLIPQDEFLPVLAPEYEIMCLGE------SFKSQVTLP 586

Query: 942 CNAPF----EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK--GSGEQQEKV 995
             A          G   S+ + A+++    ACK L E+G   +  LP +   +G+ ++  
Sbjct: 587 PMAALPSSQRTFMGLEMSTKKEAKRSAAFEACKVLRELGVLNEHFLPHREDKTGQARDAD 646

Query: 996 DQ 997
           DQ
Sbjct: 647 DQ 648



 Score =  115 bits (288), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 232/542 (42%), Gaps = 85/542 (15%)

Query: 1323 GEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP- 1381
             + E +L + Y + LP +LC    +P SL +    LPS+ R +   L A  L  ++++P 
Sbjct: 875  SKSESLLTQPYRLLLPLKLCQGSRIPRSLWKVFSYLPSLTRLLHDALQAKFLFKRLDFPA 934

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +     + ALT       + Y+  E +GDA+LK   S  +++ + +K EG ++ +R + +
Sbjct: 935  ISLPHGIHALTPPGVGVPWDYQTLETVGDAFLKLATSVHVYISHLRKGEGDMSHVRARSI 994

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
             N  L + A+   L   I + RF   +                                 
Sbjct: 995  DNAYLRRKAVQANLPGSILSQRFRTGK--------------------------------- 1021

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY----VEGGKDAANH 1557
                    + D   E+G+   + +  R +  + L+DVVEAL+G       +E G      
Sbjct: 1022 --------FRDAQTEEGKELANGNFSRKIPRRVLSDVVEALLGAGLLTGGIELGLKVGTA 1073

Query: 1558 L-MKWIGIQVESDPE---EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
            L + + GI   S        G  +     P  +L       +E  +   FK++  LV+A+
Sbjct: 1074 LDLCFGGISPWSQRTLTISFGKDAHDKLDPSMLLTC---EQIERKINYVFKEKLFLVQAL 1130

Query: 1614 THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            TH S  S   +CY+R E++GDAV+D  I +H +  + N     L+  RA    N +   +
Sbjct: 1131 THRSANSFLTNCYEREEWLGDAVIDMWIVEHAYKRFDNATADELSLARAKVACNGSLGFL 1190

Query: 1674 AVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKAPKVLGDI 1727
            A+K   LH  + H S    +   + ++ +     + E      N F + D   PK+L D 
Sbjct: 1191 AIKKLGLHEFIMHKSDNFHQACAEAIEAIEPFTKISEFFSNINNLFVVFD--PPKILNDA 1248

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL------PMHPVRELQERCQ----- 1776
            +E+I GA+F+DSG +    ++V   + +  VTP         P+  +  L++R Q     
Sbjct: 1249 LEAIVGAVFVDSGLNLPTAYRVLDVIFED-VTPSLSRLAARDPVSTLLRLRDRYQCTELL 1307

Query: 1777 --------QQAEGLEYKASRSGNLATVEVYIDGVQVGVAQN-PQKKMAQKLAARNALAVL 1827
                       EG E K   S  +  +E +  G Q+G+ ++     +A++ A+  A+ VL
Sbjct: 1308 RTTTTINEPNPEG-EEKTPVSVRVCRIEFH--GQQIGIGRHQSSTSVAEQRASLEAIKVL 1364

Query: 1828 KE 1829
            +E
Sbjct: 1365 QE 1366


>gi|75050051|sp|Q9GLV6.1|DDX58_PIG RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
           Full=DEAD box protein 58; AltName: Full=RHIV-1; AltName:
           Full=RIG-I-like receptor 1; Short=RLR-1; AltName:
           Full=RNA helicase induced by virus; AltName:
           Full=Retinoic acid-inducible gene 1 protein;
           Short=RIG-1; AltName: Full=Retinoic acid-inducible gene
           I protein; Short=RIG-I
 gi|9957597|gb|AAG09428.1|AF181119_1 RNA helicase [Sus scrofa]
          Length = 940

 Score =  137 bits (345), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 242/554 (43%), Gaps = 62/554 (11%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQL++   A+  KNTI    TG GKT +++L+         R  +K   VF   ++
Sbjct: 240 KPRKYQLELALPAQNGKNTIICAPTGCGKTFVSLLICEHHLKKFPR-GRKGKVVFFAIQL 298

Query: 362 PLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P+  QQ  V     E+ GY V    G       D    ++  +   ++++T QIL+N L 
Sbjct: 299 PVYEQQKSVFSKHFERLGYKVAGISGATS----DTVCVEQIVENSDIIILTPQILVNCLT 354

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVNLK 474
           +  I  +    L+I DECH+  K+HPY+++M  +       S +  P V G+TAS V + 
Sbjct: 355 NGTIPSLSVFTLMIFDECHNTSKQHPYNVIMFSYLDRKLGGSSDSLPQVIGLTAS-VGVG 413

Query: 475 GVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVV--VEYDKAASLWSLH 530
              ++ +    IC L + LD SV+ T++D  +ELE+ V  P +    VE         + 
Sbjct: 414 DAKNKAEATEYICKLCASLDTSVIATVRDNLEELEEVVYKPQKFFRKVELRTTDRFKCII 473

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
            QL  ME+        S  +S ++ +G    G                       + +++
Sbjct: 474 SQL-MMEI-------ESLAKSIFEELGTITLGG----------------------LFQIQ 503

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
             N+   +  QW      +  +  + + ++ +      F  SY+S +       ++    
Sbjct: 504 NSNFGTQKYEQWIVKVQKECAVFQMPDKDKESRICKALF--SYMSHLRIYNDALIINEHA 561

Query: 651 SKKDA--KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
             KDA   + D        G +EIE+   L        + ++ I   ++      PK++ 
Sbjct: 562 RMKDALDYLKDFFRNIRAAGFDEIEQD--LTQRFEEKLQELESI---SIDPSNENPKLRD 616

Query: 709 LIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE---M 764
           L  IL  +Y    + R I+FV+       L K   E P LSF+K + L G   + +   M
Sbjct: 617 LCFILQEEYHLNPETRTILFVKTRALVDALKKWIKENPKLSFLKPSILTGRGKTNQNIGM 676

Query: 765 RTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
                +  +  FR D    +L+ TSVA+EG+DI QCN+VI ++    V+  IQ+RGR R 
Sbjct: 677 TLPAQKCVLDTFRTDKDNKILITTSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRA 736

Query: 824 PGSDYILMIERGNL 837
            GS   L+    +L
Sbjct: 737 RGSKCFLLTANADL 750


>gi|156368540|ref|XP_001627751.1| predicted protein [Nematostella vectensis]
 gi|156214670|gb|EDO35651.1| predicted protein [Nematostella vectensis]
          Length = 199

 Score =  137 bits (344), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 9/191 (4%)

Query: 1593 HALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTN 1651
               E  +  +F ++  L++A+THAS   + ++ CYQRLEF+GDA+LD L+T+ ++   TN
Sbjct: 2    QGFEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTN 61

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL---LKP 1708
            L PG LTDLR A VNN  FA +AVKH  +  L   S     +I  FV  V E     ++ 
Sbjct: 62   LDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQD 121

Query: 1709 GFNSFGLGD---CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--L 1763
             F +    D    +APKVLGDI ES+AGAIFLDSG D  + W+V+  +L P +   +  +
Sbjct: 122  PFLTLSNDDEEGIEAPKVLGDIFESVAGAIFLDSGMDLVLTWRVYYRMLKPYIDAYSADV 181

Query: 1764 PMHPVRELQER 1774
            P +PVR + E+
Sbjct: 182  PKNPVRLIHEK 192



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 32/170 (18%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            +++ALT AS  +   T CY+R E LGDA L ++V+  ++ +      G+LT +RQ +V+N
Sbjct: 18   LIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNN 77

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
             +  + A+  G    +   + +P  +   G   VF +  K       ++E    +D   T
Sbjct: 78   NIFAEIAVKHGFNKSLF--QMSPEWFNKIG---VFVDHVK-------EREARGIQDPFLT 125

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
              N       D E+G          + + K L D+ E++ G  +++ G D
Sbjct: 126  LSN-------DDEEG----------IEAPKVLGDIFESVAGAIFLDSGMD 158


>gi|66802840|ref|XP_635263.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
 gi|60463423|gb|EAL61608.1| RNA-directed RNA polymerase [Dictyostelium discoideum AX4]
          Length = 2403

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 246/557 (44%), Gaps = 79/557 (14%)

Query: 289 VGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQ 348
           + K  E  E +P    R YQ++   Q+ + NT+  L TG GKTL++++ +  + +   + 
Sbjct: 262 IPKFKEGVEIIP----RDYQIESYYQSTQDNTLLVLPTGMGKTLVSIMTLLEMFSINDQD 317

Query: 349 N----KKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
           N     K +A+FLV +VPLV QQA  I   T   V    GE+      A    +E+D   
Sbjct: 318 NSCGDSKRIALFLVDRVPLVTQQAGAIEAITNLKVCKLYGEINDSRTRAFVRSKEYD--- 374

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVF 464
           VLV T   L+N+L    + +     +  DE HHA  +H ++ V+ ++   T    RP + 
Sbjct: 375 VLVSTVGSLVNLLEVRHLNILDFYFITFDEVHHATGEHDFNKVV-DYIRKTDLNFRPRIL 433

Query: 465 GMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKA 523
           G+TAS V++                 S +D V  +IKD +E +   V  P+ ++      
Sbjct: 434 GLTASLVSIGN---------------STIDIVQRSIKDMEERMLSRVFKPTSLLTN---- 474

Query: 524 ASLWSLHEQLKQMEVAVEEAAQSS-SRRSKWQFMGARDAGAKEELRQVYGVSERTESDGA 582
               S   +L+   V+ + + Q S    S  +F+        +EL Q++      + DG 
Sbjct: 475 ----STQSELQPELVSFKTSGQESLIETSICEFL----VSNSKEL-QIFLNYSDVDLDGV 525

Query: 583 ANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQE--SYLSKVVSL 640
                                  +   SFL AL+  ++ + QL+  + E    L K+  L
Sbjct: 526 -----------------------RGNPSFLKALERLDKYSKQLESIYIEYTKVLIKLYEL 562

Query: 641 LQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVA 698
           L     EG       K V +    +   TN+  E   +LL+      G++ D        
Sbjct: 563 LSVLSTEG------PKQVLTGLDLLMQSTNQENELYNKLLELRYYISGQYEDRESNFEKG 616

Query: 699 DGKVTPKVQSLIKILLKYQHTE---DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASL 755
             +    + SL   +      E   D R ++FVE    A  L  +  + P   ++ +  L
Sbjct: 617 STRYRKLISSLEYAISDASDGELQKDLRILVFVETRSGASNLTSMLKKEPFQEYLHTKRL 676

Query: 756 IGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
           +GHN    M + + Q  I KFRDG+  L+V T+V EEG+D++ CN+VI +D   ++ + I
Sbjct: 677 VGHNGDDGMDSEKQQSIIRKFRDGKCRLIVTTNVLEEGIDVQDCNIVICYDGILSLKSLI 736

Query: 816 QSRGRAR-KPGSDYILM 831
           Q RGRAR K  S +I++
Sbjct: 737 QRRGRARSKNESKFIII 753


>gi|291383111|ref|XP_002708086.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I
           [Oryctolagus cuniculus]
          Length = 926

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 259/585 (44%), Gaps = 86/585 (14%)

Query: 303 QARPYQLDV-LEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQL++ L   K KNTI    TG GKT +++L+          Q +K   VF    V
Sbjct: 243 KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKTFP-QGQKGKVVFFANHV 301

Query: 362 PLVYQQAEVIRE---QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P+  QQ  V  E   + GY V    G   ++       Q+  +   ++V+T QIL+N L+
Sbjct: 302 PVYEQQKSVFSEYFERLGYSVAGIAGATVENV----PVQQIVENNDIIVLTPQILVNNLK 357

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK-----EKRPSVFGMTASPVN 472
              I  +    L+I DECH+  K+HPY+ +M  FY+   K     +  P V GMTAS V 
Sbjct: 358 DGTIPSLSVFTLMIFDECHNTCKQHPYNKIM--FYYLDQKLGGSSDPLPQVVGMTAS-VG 414

Query: 473 LKGVSSQVDCAIK-ICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSL 529
           + G +   D A++ IC L + LD SV+ T+K+  +EL++ V  P                
Sbjct: 415 V-GDAKNTDEAVEYICKLCASLDASVIATVKENLEELQEIVYTP---------------- 457

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
               +++   VE    +  +R   Q M   ++ AK+   ++  +S+             +
Sbjct: 458 ----QKISRRVESRTTNGFKRIISQLMRETESLAKDVFEELENLSQ-------------I 500

Query: 590 RAINYALGELGQWC--AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV- 646
           +   +   +  QW    +K  ++F            QL  K +ES + K + L    L  
Sbjct: 501 QNREFGTQKYEQWIVEVHKACRTF------------QLPDKDEESRICKALYLYTSHLRK 548

Query: 647 --EGAVSKKDAKVVDS----ENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADG 700
             +  +  + A++ D+     N F +      +E E   +    G   V  +   ++   
Sbjct: 549 YNDALIISEHAQMKDALNYLNNFFKDVRAAGFDETEQDLTRRFEG--KVQELETVSMDPS 606

Query: 701 KVTPKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
              PK++ L  IL +  H   + + I+FV+       + K   E   LSF+K   L G  
Sbjct: 607 NENPKLKDLYLILQEEYHVNPETKTILFVKTRALVDAIKKWIEENSKLSFLKPGILTGRG 666

Query: 760 NSQEMR--TFQMQETIA-KFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
            + +    T   Q+ +   FR +G   +L+ATSVA+EG+DI QCN+VI ++    V+  I
Sbjct: 667 KTSQTTGMTLPAQKCVLDAFRSNGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMI 726

Query: 816 QSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
           Q+RGR R  GS  +L+    ++       N    +E +  E+I R
Sbjct: 727 QTRGRGRAKGSKCLLLTSNADVIEK---ENINMYKEKMMNESILR 768


>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
          Length = 1001

 Score =  136 bits (343), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 12/185 (6%)

Query: 1602 KFKDRGLLVEAITHASRPSSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            KF ++  L++A TH S  S+ V+ CYQ+ EF+GDA+LD LIT H+  +  NL PG+LT  
Sbjct: 768  KFLNKSHLIQAFTHLSYLSNSVTGCYQQYEFLGDAILDFLITLHIQSNTQNLSPGQLTYF 827

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL-LKPGFNSFGLGDC- 1718
            R+A VNN  F  +A+KH  + ++   S+ L      F++ V ++  LK  +       C 
Sbjct: 828  RSAVVNNNTFGLLAIKHSFYKYIYSSSNELFSSYNSFIEIVKDDHGLKDEYFESPFVICP 887

Query: 1719 -------KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPET--LPMHPVR 1769
                   +APKVLGD+ ES+AGAIFLDSG D   VW+++ PLL P++      LP HP  
Sbjct: 888  TGSEEGYQAPKVLGDLFESVAGAIFLDSGLDLVTVWKIYYPLLKPVIDKYMIKLPRHPAV 947

Query: 1770 ELQER 1774
            +  E+
Sbjct: 948  DFFEK 952



 Score = 89.4 bits (220), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 721 DFRAIIFVERVVAALVLPKVF----AELPSLSFVKSASLIGHNNSQE-------MRTFQM 769
           +  AI+F +R   A+VL K+      +  +   + S  ++GH            MR+ + 
Sbjct: 190 ELHAIVFTQRRCTAVVLSKLINYQVEKDETYKGLNSDFVLGHAFDSNICLVDGSMRSEKQ 249

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
              ++ F+  +  +LV+TSV EEGLD+R+CN+V+RFD       Y QS+GRAR  GS +I
Sbjct: 250 NLILSNFKQDKFNVLVSTSVVEEGLDVRKCNLVVRFDGINNYREYAQSKGRARASGSKFI 309

Query: 830 LMIERGN-----LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ 884
           +M E G        H       +  EE L ++   R   +  +    ++  +     VY 
Sbjct: 310 IMTEEGQEFDTKKQHIV----MQQIEEILFEQCQNRVLPTDEEIEIEMMDEEDEDLPVYF 365

Query: 885 VES--TGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC 942
             +      ++ ++AV L++ YCS+LPSD++    P+F+    +         C L L C
Sbjct: 366 SHNGYDAPRITKDNAVSLLYRYCSRLPSDQFCKTNPKFLYHVLKNQFCA---ECMLPLNC 422

Query: 943 NAP 945
           + P
Sbjct: 423 SLP 425



 Score = 62.0 bits (149), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 45/207 (21%)

Query: 1278 SYADYYKQKYGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFL 1337
            ++  YY +KY +E I   +PLI    V  C   +S  F + E      ++ ++    V  
Sbjct: 580  TFVQYYLEKYNIE-ISPNKPLI---DVISCSQQIS--FTNCESNTNTKKKNVNMEKLV-- 631

Query: 1338 PPELCF-IHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI------------------ 1378
             PELC  +   P  L      LP I+   E   LA++LKD I                  
Sbjct: 632  -PELCKKVSLFPADLHFQLPCLPRIIYFYEYYFLALELKDMIAEKIKINKSENQGRYQSS 690

Query: 1379 ----------------NYPVPAS-KILEALTAASCQETFCYERAELLGDAYLKWVVSRFL 1421
                            N   P+  KI EALT       F  ER E+LGD++LK  VS F+
Sbjct: 691  VLDLENLLQLKNYVTENVKSPSVLKIFEALTTRQASMPFDLERLEVLGDSFLKQAVSIFV 750

Query: 1422 FLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            F + P  HEG+LT  R++ ++   L Q
Sbjct: 751  FFQNPSFHEGKLTIRRKKFLNKSHLIQ 777



 Score = 58.5 bits (140), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 29/202 (14%)

Query: 432 LDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIK------ 485
           +DECH+A KKH Y  +M E +    K + P + G+TAS +N K      D AIK      
Sbjct: 1   MDECHNATKKHSYVKLM-EIFGNYPKSEHPHILGLTASIINEKYTGVFNDQAIKSFLKNR 59

Query: 486 ICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL-----------K 534
           I  LE ++ S   T  D +   K    PSE+V  + K  S+    E +            
Sbjct: 60  ILGLERRMRSKCITCSDPQATTKFAAKPSEIVQTFKKGYSVNGFLEFVPVIESMKKILDT 119

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINY 594
           +++  +  A +  +R S+  F    D    E+L+    +SER   +  A  +  +R    
Sbjct: 120 KLDYFLCLANEKKTRVSRLSF----DDLLTEKLQ----LSER---NACAISVDAMRYCKE 168

Query: 595 ALGELGQWCAYKVAQSFLTALQ 616
            L  LG  C +  AQ  +  ++
Sbjct: 169 ILESLGPLCVFWAAQILIKQIE 190


>gi|358380675|gb|EHK18352.1| hypothetical protein TRIVIDRAFT_47151 [Trichoderma virens Gv29-8]
          Length = 1386

 Score =  136 bits (342), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 201/469 (42%), Gaps = 87/469 (18%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H  + +   ++   K Y    P     +  +P    +    +PSI+  +  M++A +L
Sbjct: 851  FLHRPQGDPSKDQATSKPYARVYPLPWATVDAIPVRHAQFGMLIPSIIHELGVMIMAKEL 910

Query: 1375 KDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
             + I   V       + +A+ A S  E   YER ELLGD+ LK+     +  +YP   EG
Sbjct: 911  ANNILRKVGIKNMDLVRQAICARSASEPVNYERVELLGDSILKFFTCIRVAAEYPDYPEG 970

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
             L+  R +++SN  L++ AL   L  ++    F   +W    +  V DE  ++G      
Sbjct: 971  YLSHKRDRLISNARLHKTALEFKLPRFLNTKPFTGQKWRPLYLDAVLDEVRQEG------ 1024

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
                                        LE  +S  R +S+KTLAD+VEALIGV YV+G 
Sbjct: 1025 ----------------------------LE-PTSQKRKISTKTLADMVEALIGVSYVDGH 1055

Query: 1552 KDAANHLM-------KWIGIQVESDPEEV--GCPSRPACVPESVLRSVDFHALEDALKIK 1602
             D A   +        W    VE+D   +    P+     P           LE  +   
Sbjct: 1056 LDKAVKCISLFLPETNWTS--VENDRRNIFDKVPADEPLPP-------TLEPLEGLIGYS 1106

Query: 1603 FKDRGLLVEAITHASRPS-SGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR 1661
            F+ + LL+EA+THAS  + +G    +RLEF+GDAVLD++I   LF     LP  R+  L+
Sbjct: 1107 FQKKALLIEALTHASYAAETGKRSLERLEFIGDAVLDNIIVTKLFNVKPELPHFRMHTLK 1166

Query: 1662 AAAVNNENFARVAVKHKLHV----------------------HLRHGSSALDRQIRDFVK 1699
               VN +  A + ++  L +                       +RH S  +  ++++ +K
Sbjct: 1167 TGLVNGDFIAFMTMERGLKLTEKIVTEDGTLKSEEMMSYLWTFMRHNSMHIGIEMKETMK 1226

Query: 1700 -------EVLEELLKPGFNSFGLGDCKAP-KVLGDIVESIAGAIFLDSG 1740
                   E+L+E+       + L     P K   D+ E+I GA+++DSG
Sbjct: 1227 RHAALRGEILDEMENGTHYPWALLAALNPKKFFSDVFEAILGAVWVDSG 1275



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 20/184 (10%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQ+++LEQ+ ++N I  ++TG+GKT +AVL I+S   +L+  + K +  F+ P V L
Sbjct: 3   ARAYQIEMLEQSLERNVIVAMDTGSGKTQVAVLRIKS---ELESCDPKKIVWFMAPTVSL 59

Query: 364 VYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQ +V++ Q   V +    G    + W  + W     T +V+V T Q+LL+ L H+ I
Sbjct: 60  CTQQKDVLKLQIPAVPMTLLAGNSAINAWGPEIWHTLLGTTRVVVSTPQVLLDALDHAYI 119

Query: 423 KMEAINLLILDE--------------CHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGM 466
            M  + LL+ DE               H+ + K+P   VM   YH   +     PS+ G+
Sbjct: 120 TMNHLALLVFDEGKNKTADTVCLIYIAHNCIGKNPGGRVMLNHYHPCKQVGGSVPSILGL 179

Query: 467 TASP 470
           TA+P
Sbjct: 180 TATP 183



 Score = 86.3 bits (212), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 9/173 (5%)

Query: 773 IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           +  FR G++ LL+ATSV EEG+D+  CN+VI FD   T  ++IQ RGRARK  S  ++  
Sbjct: 439 LLNFRHGKINLLIATSVLEEGIDVPACNLVICFDTPTTSKSFIQRRGRARKRDSKLVIFF 498

Query: 833 ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
           E  + +   ++      ++    E  E   LS L+D+      ++    V+ V STGA +
Sbjct: 499 ELESPALEKWITKEEEMKKLFDDEQREVRRLSQLEDS------ESPSDDVFIVPSTGARL 552

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAP 945
             ++A   +  +C  L    +   RP++I+ +    G  T   C + LP   P
Sbjct: 553 EFDNAKSHLEHFCRVLSPGEFVDSRPDYIIHKEPDSGSLT---CVVLLPPFLP 602



 Score = 50.1 bits (118), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 2/146 (1%)

Query: 1600 KIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
            K+  K+  L+ +AI   +R +S    Y+R+E +GD++L       +   Y + P G L+ 
Sbjct: 917  KVGIKNMDLVRQAI--CARSASEPVNYERVELLGDSILKFFTCIRVAAEYPDYPEGYLSH 974

Query: 1660 LRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK 1719
             R   ++N    + A++ KL   L        +    ++  VL+E+ + G          
Sbjct: 975  KRDRLISNARLHKTALEFKLPRFLNTKPFTGQKWRPLYLDAVLDEVRQEGLEPTSQKRKI 1034

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSV 1745
            + K L D+VE++ G  ++D   D +V
Sbjct: 1035 STKTLADMVEALIGVSYVDGHLDKAV 1060


>gi|301785794|ref|XP_002928312.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
           [Ailuropoda melanoleuca]
 gi|281341395|gb|EFB16979.1| hypothetical protein PANDA_018227 [Ailuropoda melanoleuca]
          Length = 928

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 246/558 (44%), Gaps = 70/558 (12%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   AK+ KNTI    TG GKT +++L    IC + L++  Q +K   VF  
Sbjct: 240 KPRNYQLELALPAKEGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPQGQKGKVVFFA 295

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQ  V     E+ GY V    G   +     +     +D   ++++T QIL+N
Sbjct: 296 IQLPVYEQQKSVFSKYFEKLGYKVAGVSGATSE-IVSVEEIVENYD---IIILTPQILVN 351

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            LR   +  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V
Sbjct: 352 SLRKGTVPSLSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTAS-V 410

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSL 529
                 +  +    IC L + LD SV+ T+KD  +ELE+ V  P +   +     +    
Sbjct: 411 GTGDAKNTTEAMEYICKLCASLDTSVIATVKDNLEELEEIVYKPQKFFRKVKLRTT---- 466

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
                + +  + +  + +   +K  F    D  +   L  V+ +  R             
Sbjct: 467 ----DRFKCIISQLMRETESLAKKIF----DELSTVTLENVFQIQNR------------- 505

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV--- 646
              N+   +  QW         L          +QL  K +ES + K + L    L    
Sbjct: 506 ---NFGTQKYEQWILSVQKTCIL----------FQLPDKEEESRICKALYLYTSHLRKYN 552

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEG-ELLDSHVV-SGGEHVDVIIGAAVADGKVTP 704
           +  +  + A++ D+ +   +   N    G + ++ H+     E +  +   ++  G   P
Sbjct: 553 DALIINEHARMKDALDYLKDFFANVRAAGFDEIEQHLTWRFEEKLRELESVSMDPGNENP 612

Query: 705 KVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---NN 760
           K+Q L  IL  +Y    + R I+FV+       L K   E   LSF+K   L G    N 
Sbjct: 613 KLQDLSFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFLKPGILTGRGKTNQ 672

Query: 761 SQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
           +  M     +  +  FR DG   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+RG
Sbjct: 673 NTGMTLPAQKCALDAFRTDGDKKILIATSVADEGIDIAQCNLVILYEYVGNVIRMIQTRG 732

Query: 820 RARKPGSDYILMIERGNL 837
           R R  GS   L+    ++
Sbjct: 733 RGRARGSKCFLLTSNADV 750


>gi|260809268|ref|XP_002599428.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
 gi|229284706|gb|EEN55440.1| hypothetical protein BRAFLDRAFT_249510 [Branchiostoma floridae]
          Length = 613

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 251/570 (44%), Gaps = 93/570 (16%)

Query: 298 KMPEEQA-------RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN 349
           K P EQ+       R YQ+++ E A + +NTI    TG+GKT +A+ + R          
Sbjct: 8   KPPPEQSELKDIPMRGYQMELAEPALEGRNTIICAPTGSGKTRVAIKITRDHLEVGAGVE 67

Query: 350 KKMLAVFLVPKVPLVYQQAEVIRE--QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLV 407
            +   VFLV K+PLV QQ    RE     Y +    GE   D    +    ++D   V++
Sbjct: 68  ARRRVVFLVNKMPLVEQQCNAFREYLSPKYDILPLSGETTADIPVGETLP-DYD---VII 123

Query: 408 MTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----PSV 463
           +TAQ+L N LR  +I ++  ++LI DECHH  K  PY+ +M+ +     + K     P +
Sbjct: 124 LTAQVLENALRDELITLDTFSMLIFDECHHCQKNDPYNAIMTRYIKQKVERKSSISLPQI 183

Query: 464 FGMTAS--PVNLKGVSSQVDCAIKIC-NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEY 520
            G+TAS      KG    V+  ++ C NL+++  S V  ++ ++EL+K+   P E V   
Sbjct: 184 IGLTASLGVGKAKGQKEAVEHILRACANLDAEWISQV--VEHKEELQKYNQKPDEEVKPV 241

Query: 521 -----DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
                D  A + ++  +  +  +A+E   +  S+R K  +            + V  ++ 
Sbjct: 242 SGRSEDPFADMINMIMEDIEKTLAIEADLKPPSQREKQAYE-----------QWVVNLAR 290

Query: 576 RTESDGAANLIQKL-RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYL 634
           +    GA    +K+ RAI+ A   L ++           A+  D R    L       YL
Sbjct: 291 K----GATLRDKKVSRAIHAATTHLRKYFDA-------LAINADARTKDAL------QYL 333

Query: 635 SKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIG 694
            K V+ LQ E  +G     D  +V                      H     E +     
Sbjct: 334 EKFVTGLQKEGFDGT----DVDLV---------------------KHFTEAKERLQ---- 364

Query: 695 AAVADGKVT-PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKS 752
              AD K + PK+  L  ++L+ Y+   D R ++F +     + L     E  +L  +  
Sbjct: 365 ECAADPKYSNPKLDQLKYMILQAYEEKPDSRCLLFCKTRALTIALLTWMQEDQALRKLNP 424

Query: 753 ASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
             L+G   S+    M   Q  E +  F  G   ++++TSVAEEG+DI +CN V R+D   
Sbjct: 425 GRLVGAGASESTGGMTQNQQVELLELFTTGGHKIVISTSVAEEGIDIAKCNFVFRYDYVG 484

Query: 810 TVLAYIQSRGRARKPGSDYILMIER--GNL 837
             +  +Q+RGR R  GS  +L+  R  GN+
Sbjct: 485 NEIGKVQTRGRGRAEGSKSVLIAGREGGNV 514


>gi|297836192|ref|XP_002885978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331818|gb|EFH62237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  135 bits (341), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 174/362 (48%), Gaps = 43/362 (11%)

Query: 1577 SRPACVP-----ESVLRSVD---FHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQR 1628
            S  +C+P     ES+   +D     A+E  L   F ++ LL EA+TH S   S +  +QR
Sbjct: 350  SNESCLPHERSLESLSSEIDSDPVKAVEKILNYSFTNKNLLREALTHNS---SNLLPFQR 406

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSS 1688
            L FVG A +      H++ +Y  L P  LT L+ A   N+ +ARVAVK  ++  L+    
Sbjct: 407  LMFVGKAGISLAFANHMYLTYPKLGPKELTMLQNANTCNDRYARVAVKRGIYQFLKCNVR 466

Query: 1689 ALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
               RQI +F+K + +E     F S      KAPK+L D+VES+AGA+++D  RD   +W+
Sbjct: 467  TSKRQIIEFIKMLGKEDDPDPFRS-----VKAPKILTDLVESVAGAVYIDVNRDVKRLWE 521

Query: 1749 VFQPLLDPMVTPETL--PMHPVRELQERCQQQAEGLEYK-----ASRSGNLATV-EVYID 1800
            + + L +P+ T + +    HP+  L     +  + +E++      S   N AT+ EVY+D
Sbjct: 522  ILRGLFEPIYTLDDIRRKPHPLLTLFCLGYKHGKRIEFRYRECEKSSGMNEATITEVYVD 581

Query: 1801 GVQVGVAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGD---ENGKKRKNGTQTFTRQT 1857
               +   ++  +  ++  AA  AL  L E    E         EN KK           T
Sbjct: 582  DKFIACGKSCNRAASKMRAATMALEKLSESMPIELVMDDSIEYENSKK-----------T 630

Query: 1858 LNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVKKAKDS 1917
            L +IC  R WP P++   R      +KRF  +V + T  +  T    G+     +KA+ +
Sbjct: 631  LIEICNERKWPNPIFSVERS-----SKRFVSSVTIETPTEEGTLYIEGDLEKGKEKAEYN 685

Query: 1918 AA 1919
            AA
Sbjct: 686  AA 687



 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 21/193 (10%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVS--CYQRLEFVGDAVLDHLITKHLFFSYTN 1651
            A+E  L   F D+ LL EAIT  S  ++  S   ++RLEF+GD+VL  + + H+  +Y N
Sbjct: 6    AVEKILNYTFTDKNLLKEAITKTSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEITYPN 65

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVH---------LRHGSSALDR------QIRD 1696
            L P  L D+R A V+NE FARVAV + LH           L   S  L        +I+D
Sbjct: 66   LHPNDLNDVRIANVSNETFARVAVNNNLHQFIIFDAPNPLLHKMSHVLTNKWCHVLKIKD 125

Query: 1697 FVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDP 1756
            F + V EE+    + +   G  KAPK L D+VE+IAGA+++D   D   VW++F+ L++P
Sbjct: 126  FSEAVKEEV----YPAPCGGLVKAPKFLADLVEAIAGAVYIDVDFDVQRVWEIFRVLVEP 181

Query: 1757 MVTPETLPMHPVR 1769
            + T + L   P R
Sbjct: 182  ICTLDDLRKQPER 194



 Score = 43.5 bits (101), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 1378 INYPVPASKIL-EALTAASCQET----FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
            +NY      +L EA+T  S   T      +ER E LGD+ L  V S  + + YP  H   
Sbjct: 11   LNYTFTDKNLLKEAITKTSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEITYPNLHPND 70

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
            L  +R   VSN    + A++  L  +I  D   P
Sbjct: 71   LNDVRIANVSNETFARVAVNNNLHQFIIFDAPNP 104


>gi|213408108|ref|XP_002174825.1| dicer [Schizosaccharomyces japonicus yFS275]
 gi|212002872|gb|EEB08532.1| dicer [Schizosaccharomyces japonicus yFS275]
          Length = 1384

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 145/297 (48%), Gaps = 30/297 (10%)

Query: 299 MPEEQA-RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC---NDLQRQNKKMLA 354
           + ++QA R YQ      A K+NT+  + TGAGKTL+A+ LI  +    N    +  K ++
Sbjct: 14  LTKKQALRNYQEVAYNIAIKQNTLLVMNTGAGKTLLAIKLIEYVLEQENSTCEKTSKRIS 73

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           +FLVPKVPLV QQA+ ++ Q    VG +CGE+   + D   +  +F    V+V+T  +L 
Sbjct: 74  IFLVPKVPLVEQQADYVQTQLNRPVGRFCGEISNLYHD-NVFAEKFMKNDVVVVTGGLLF 132

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK----RPSVFGMTASP 470
             L    IK+  +NLLI DECHHA K   Y  +M  FYH   +E      P VFGMTASP
Sbjct: 133 ECLSKGFIKLSDVNLLIFDECHHASKDDVYVRIMKYFYHEPLREHPETIMPRVFGMTASP 192

Query: 471 VNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD--------- 521
           +    + ++     +   LE   DS +C I D ++L K +  P   +++Y          
Sbjct: 193 L----MGNKWALEKEFNKLEDIYDSKLCIITD-EDLGKELRSPKTFILQYSIEDFSTQSK 247

Query: 522 KAASLWSLHEQLKQMEVAVEEAAQSSSRRS------KWQFMGARDAGAKEELRQVYG 572
            +   W L E   +++  +      +           WQF   R A  K + R++ G
Sbjct: 248 VSDRFWKLTENFDRLKQIITRVVTETVELGLWFGDYSWQFF-LRHALKKYDARRLRG 303



 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 156/312 (50%), Gaps = 25/312 (8%)

Query: 702 VTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           VT KV  L K L   +      R IIFVER V A +L K+F +      ++  SL+G+ +
Sbjct: 343 VTNKVIILYKFLRNLFATNSTARVIIFVERKVTAFLL-KLFFDKIDFEGIRVESLVGNGS 401

Query: 761 SQ---EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
           +Q   E  ++++Q E I +F+ G   +LVAT++AEEGLDI  C+VV RF L KT +  IQ
Sbjct: 402 NQAGDEQMSYKLQKEVIRRFKHGSANVLVATAIAEEGLDIPSCDVVFRFSLCKTAIQLIQ 461

Query: 817 SRGRARKPGSDYI-LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV 875
           S+GRAR   S ++ L+ E      +         +ETL      R+      +       
Sbjct: 462 SKGRARANTSIFVNLLSEDEKELFSELCTKEIILKETLYAYCCTRSPKVEFDNNITDFFN 521

Query: 876 DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
           D     +Y++E TGA+++   AV L++  C ++PSD Y++  PEF ++   +      ++
Sbjct: 522 D--DNELYKIEETGALLTPFIAVSLLYGLCQRIPSDPYTLYLPEFKIQNEGE-----HFT 574

Query: 936 CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHE---------MGAFTDMLLPDK 986
           C+L+LP          P C + + A++   + AC +L E         +  F D LL  +
Sbjct: 575 CELRLPAILKIPPYITPPCRNKKKAKRYAAVKACLQLIESELIDKRLRIKTFYDELL--E 632

Query: 987 GSGEQQEKVDQN 998
              E+QE   +N
Sbjct: 633 AEKEEQEHSMKN 644



 Score =  117 bits (292), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 186/430 (43%), Gaps = 59/430 (13%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASCQETFCY 1402
             I P P  +   A  LPS++   E + L   L+ ++   +    +LEA T+      F Y
Sbjct: 891  LIMPFPYEIRNSALLLPSLLYMFEQVHLVDALRVRLQAKISTKSLLEASTSPGSVLPFDY 950

Query: 1403 ERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQAD 1462
            +R E  GD +LK   S  +FL Y    E +L   R++++ N  L+  +    L  ++ ++
Sbjct: 951  DRYEFYGDTFLKLAASNSVFLSYLWVPECKLHIERKRIIRNSTLFTISKKHDLPGFLLSE 1010

Query: 1463 RFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEG 1522
             F    +   G  P                          T K+ N+     ME  +L  
Sbjct: 1011 PFVIKTFIPFGYQP--------------------------TQKSKNK-----MERSQL-- 1037

Query: 1523 DSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPA 1580
                   L++KT+AD+VE+ +G    + G D A  L   +G+     +  +E        
Sbjct: 1038 -------LANKTVADIVESSLGACLYDSGVDEALALGTRLGLNFYKTTKWDEWNSVFNVE 1090

Query: 1581 CVPESVLRSVDFHA--LEDALKIKFKDRGLLVEAITHAS--RPSSGVSCYQRLEFVGDAV 1636
             +  S       HA  LE  +   FK  GLL  A THAS  + +     YQ+LEF+GDAV
Sbjct: 1091 NLVPSAENDCFKHASGLESLVGYTFKHPGLLKIAFTHASYVKTTQTAVNYQQLEFLGDAV 1150

Query: 1637 LDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRD 1696
            LD ++ ++LF  Y N     LTD ++  V N++ A V+ K  L+  +   +  +    ++
Sbjct: 1151 LDFIVVRYLFKKYQNKTAAELTDTKSFYVCNKSLAYVSFKLGLYDFMLQDNEDIRNAYKE 1210

Query: 1697 FVKEVLEELLK--------PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
            + K V+++L +        P  +       + PK L DI ES   A++LDSG   S +  
Sbjct: 1211 Y-KSVIDKLQQDTKIDSNHPTPSEKFWLLIEPPKFLSDIFESFVCAVYLDSGFQFSAL-- 1267

Query: 1749 VFQPLLDPMV 1758
              +P L  +V
Sbjct: 1268 --EPFLKFLV 1275


>gi|390341546|ref|XP_797737.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
           [Strongylocentrotus purpuratus]
          Length = 783

 Score =  135 bits (339), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 248/553 (44%), Gaps = 74/553 (13%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           E    YQ+++ + A +  NT     TG+GKT +AV    ++  ++ R++     +F+V +
Sbjct: 83  ENLEDYQVELAKPALRGHNTCVVAPTGSGKTYVAV----AVAQEVLRKSPGKKVIFVVNQ 138

Query: 361 VPLVYQQAEVIREQTGYV--VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           V LVY+++ V ++   Y+  V + CG+ GQ                V+V+TAQIL++ L 
Sbjct: 139 VSLVYKRSTVFKK---YINDVAYICGDHGQPEITRLPLDEVLKKNDVVVLTAQILVDALT 195

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTAS--PVNLK 474
              +    I L+ILDECH   K+  Y+ +M+++     T+KE  P + GMTAS    N +
Sbjct: 196 KGQVSFNQIGLIILDECHETKKESQYNAIMAKYMEQKLTNKEPLPQILGMTASLGVGNAR 255

Query: 475 GVSSQVDCAIKICNLESKLDSV-VCTIKDRKE-LEKHVPMPSEVVVEYDKAASLWSLHEQ 532
              + +   +K+C   + +D V + T++  KE LEK V  P E             LH  
Sbjct: 256 SDKNAIQYMLKMC---ANMDVVKLSTVQKHKESLEKVVNEPDE------------GLHVV 300

Query: 533 LKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYG-VSERTESDGAANLIQK--- 588
             + E +  E  Q                   + + QV+  ++  T S      ++K   
Sbjct: 301 TSRTEDSFAEEIQ-------------------DLMYQVFKYINSSTGSSVLNTTVEKLSS 341

Query: 589 LRAINYALGELGQ-WCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
           LR+ N++        C  K        ++N + ++ QL +     YL +  S L    + 
Sbjct: 342 LRSSNHSRENFSHVLCTLKKE-----IIENFQSSDLQLSLMTCAQYLKEYSSALA---IH 393

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEI----EEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
                KDA  ++    F+   +N+      E  L+ +      E   + +     +    
Sbjct: 394 ETARTKDA--LEYLQEFIREKSNKAATSNTEKMLIRTFQDKQQELERISMSPKSPNNPAL 451

Query: 704 PKVQSLIKILLKYQHTED----FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            ++QSLI+  +    T++    FRAI+F + + +   L     E  SL  +    L+G  
Sbjct: 452 DELQSLIEGDIVTCQTQENNGPFRAILFTQTIASTWALKNWVMETDSLKDLHPEVLVGCR 511

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
           N   M     ++ +  FRDG   LL+ATS  ++G+DI  CN V R++     +A IQ+RG
Sbjct: 512 NPG-MNLRHQKDVLDNFRDGVHKLLIATSAMQQGIDIPACNFVYRYNYITDAVARIQARG 570

Query: 820 RARKPGSDYILMI 832
           R RKPG  + L++
Sbjct: 571 RTRKPGGRFDLVV 583


>gi|149408137|ref|NP_001092258.1| probable ATP-dependent RNA helicase DHX58 [Rattus norvegicus]
          Length = 678

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 240/565 (42%), Gaps = 114/565 (20%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQ--DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q AE  R      + V    G+MG    F    R      +  +L+ TA++L   L+ 
Sbjct: 60  VNQHAEEFRRMLDKQWTVTTLSGDMGSRAGFGLLAR------SHDLLICTAELLHLALKS 113

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEK-RPSVFGMTASPVNL 473
           S     +++   +L+++DECHH  K   Y+ ++S +  H   K K  P V G+TASP   
Sbjct: 114 SEEDEHVELTEFSLIVVDECHHTHKDTIYNTILSRYLEHKLKKAKPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSEVVVEYDKAAS----- 525
            G ++++  AI  I  L + LD+  ++       +L +H P P +   +YD         
Sbjct: 173 -GGATKLQGAIDHILQLCANLDTWRIMSPKNCYSQLLEHNPKPCK---QYDLCQRRTQDP 228

Query: 526 --------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
                   +  +H+QL+  ++  +   Q   ++       A +AG +E+  +VY +  R 
Sbjct: 229 FGDLLKKLMKQIHQQLEMPDLKQQFGTQMYEQQVVQLSKDAAEAGLQEQ--RVYALHLRR 286

Query: 578 ESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKV 637
            +D             Y    +  W A  + Q F     + ERA                
Sbjct: 287 YNDAL-----------YIHDTVRAWDALNMLQDFY----DTERA---------------- 315

Query: 638 VSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAV 697
                             ++V +E   +E          L D H  +        +    
Sbjct: 316 ---------------LKTQMVHAERWLLE----------LFDDHRKA--------LAQFA 342

Query: 698 ADGKVTPKVQSLIKILLKYQHTEDF-RAIIFVERVVAALVLPKVFAELPSLSFV--KSAS 754
           A G   PK++ L  ILLK   + D  R IIF      A  L     + P L  V  K   
Sbjct: 343 AQGPENPKLEMLEGILLKQFGSPDHTRGIIFTRTRQTASSLLLWLRQQPCLQTVNIKPQM 402

Query: 755 LIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
           LIG  N   S  M     QE I +FRDG++ LLVATSVAEEGLDI QCNVV+R+ L    
Sbjct: 403 LIGAGNTGQSTHMTQKDQQEVIQEFRDGKLNLLVATSVAEEGLDIAQCNVVVRYGLLTNE 462

Query: 812 LAYIQSRGRARKPGSDYILMIERGN 836
           ++ +Q+RGRAR   S Y  +   G+
Sbjct: 463 ISMVQARGRARAGQSVYSFVATEGS 487


>gi|358397707|gb|EHK47075.1| hypothetical protein TRIATDRAFT_291296 [Trichoderma atroviride IMI
            206040]
          Length = 1507

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 194/464 (41%), Gaps = 77/464 (16%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H  +   E E+   + Y    P E   +  +P +       +P+I+  +  ML+A +L
Sbjct: 967  FLHRLQGNPEKEQASSRPYSRVYPMEWAIVDTVPATHAMFGMIIPTIIHELGVMLMAKEL 1026

Query: 1375 KDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
               +  PV  S    + EA+ A S  E   YER E LGD+ LK        +  P   EG
Sbjct: 1027 ATTVLEPVGISDWGLVREAICARSANEPMNYERLEFLGDSILKLCTCIQAAVTKPDWPEG 1086

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFD 1491
             L+  R +++SN+ LYQ A+   L  ++    F   +W      P++ ED          
Sbjct: 1087 YLSYWRDRLISNVRLYQAAVDFRLPRFLVTKPFTGHKWR-----PLYLEDV--------- 1132

Query: 1492 QEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG 1551
                     L  D N    E                R LS+KTLADVVEALIG  Y EGG
Sbjct: 1133 ---------LQEDVNAPTTE----------------RRLSTKTLADVVEALIGASYCEGG 1167

Query: 1552 KDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVE 1611
               A   +     +++ D  + G       VP +         LE  L   F+ + LL E
Sbjct: 1168 IAMAEKCIAMFLSEIDWDGIDKGREILFNRVPPNERLPPILEPLERLLGYTFQRKALLTE 1227

Query: 1612 AITHASRPSSGV-----SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
            A+THAS  + GV        +R+EF+GDAVLDH+I   +F     LP   +  L+   VN
Sbjct: 1228 ALTHASFMADGVMDHGKRSLERMEFLGDAVLDHVIVTRIFEVRPELPHYTMHTLKTGLVN 1287

Query: 1667 NENFARVAVKHKL------------------HVHL----RHGSSALD-RQIRDFVK---- 1699
             +  A + ++H L                  H +L    RH ++++   Q+    +    
Sbjct: 1288 GDFLAFMTMEHGLKSMETVVTEEGSVENQETHTYLWQFMRHAANSIGIEQLATATRHAAL 1347

Query: 1700 --EVLEELLKPGFNSFGLGDCKAP-KVLGDIVESIAGAIFLDSG 1740
              E+L+ +       + L     P K   D+ E++ GA+++DSG
Sbjct: 1348 RAEILDVMENGAHYPWALLAALNPKKFYSDLFEAVLGAVWVDSG 1391



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 14/215 (6%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           +R YQL++LEQ+ ++N I  ++TG+GKT +AVL I++   +L+R + K +  F+ P V L
Sbjct: 124 SRAYQLEMLEQSLRQNVIVAMDTGSGKTQVAVLRIKA---ELERCDPKKIVWFITPTVHL 180

Query: 364 VYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
             QQ  V++ Q   V +    G      W  + W       +V++ T QILL+ L H+ +
Sbjct: 181 SAQQHTVLKLQIPSVPMQMLAGNRHLPTWTQEMWTPLLAKTRVVITTPQILLDALDHAYL 240

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTASPVNLKGVSSQV 480
           KME + L++ DE H+ V K+P   +M   YH   ++ +  P++ G+TA+P     + S+ 
Sbjct: 241 KMEHLALIVFDEVHNCVGKYPGGKIMQHHYHPCLSAGKSVPAILGLTATP----SIQSE- 295

Query: 481 DCAIKICNLESKLDS-VVCTIKDRKELEKHVPMPS 514
             A  +  LE  +D+  +     R EL K V  PS
Sbjct: 296 --ATDLVALEQLMDARCISPTLHRDELLKCVKRPS 328



 Score = 91.7 bits (226), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 724 AIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNNSQEMRTFQMQ-------ETIAK 775
            IIFVE  V   +L ++ +  P++    +  +++G ++    R            + +  
Sbjct: 491 GIIFVEERVMVKMLAEILSINPAIKKKYRVGTMVGSSSYSSKRRVVYDFGDKGDLKALQN 550

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           FR G++ LL+AT+V EEG+D+  CN+VI FD+ KT  ++IQ RGRAR   S  +L  + G
Sbjct: 551 FRSGKINLLIATAVLEEGIDVPACNLVICFDVPKTSKSFIQRRGRARMKDSRLVLFFDEG 610

Query: 836 NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV-YQVESTGAVVSL 894
           + S   +             E  E   L  ++++  L       GT+ Y    TGA +  
Sbjct: 611 DASSKKWEEKEDEMARLFEDEQREIQQLEMIEESESL-------GTICYTHPVTGARLDF 663

Query: 895 NSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQ---LPCNAPFEKLEG 951
           ++A   +  +C  L    +   RP++I+ + +  G     +  L    +P N P +    
Sbjct: 664 DNAKPHLEHFCRTLSPTEFVDSRPDYIIHKEDGVGSNALTATVLLPPFIPVN-PRQYNSA 722

Query: 952 PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKG 987
            V  S + A +     A   L++ G   D LLP K 
Sbjct: 723 SVWRSEKNATKDAAFQAYMALNDAGLLNDNLLPFKA 758


>gi|406356425|gb|AFS34609.1| retinoic acid-inducible protein I [Ictalurus punctatus]
          Length = 937

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 155/586 (26%), Positives = 249/586 (42%), Gaps = 68/586 (11%)

Query: 268 EADHNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKK-NTIAFLET 326
           E+D+  +  E +   Q   G  G  +   E+  E++ R YQ ++   A    NTI    T
Sbjct: 217 ESDNLMSNSETSVPEQCVEGTEGGVASVCERHTEKKLRKYQKELATAAYNGLNTIICAPT 276

Query: 327 GAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTG----YVVGH 381
           G GKT++AV     IC + L++  +K   VF+  KV +  QQ ++ +E         V  
Sbjct: 277 GCGKTIVAV----DICEHHLKKYPQKAKVVFMATKVEVYEQQYKLFKEHFSKDPDIRVKG 332

Query: 382 YCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL-RHSIIKMEAINLLILDECHHAVK 440
            CG+M                  VL+MT QIL+N L R  +  +    LL+LDECH+   
Sbjct: 333 VCGDMSDVSLPTL-----VSNNDVLLMTPQILVNALQRGDVESLNTFTLLLLDECHNTTG 387

Query: 441 KHPYSLVMSEFY---HTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDS-V 496
           KHPY+ +MS +    HTT     P V G TAS V +    +  +    IC L + LD+ V
Sbjct: 388 KHPYNNIMSLYIDTKHTTHTHSLPQVVGFTAS-VGIGSFKNVPEAENNICQLCANLDARV 446

Query: 497 VCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQF 555
           + T+ +   EL   V  P +   E     S       +K +   +E+ A S  +      
Sbjct: 447 ITTVTENIDELRSFVHTPEKDFFEVRPRTSEDPFISIIKSIMNNIEQLALSVYKIDTVSQ 506

Query: 556 MGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTAL 615
           +   D G++   + +  V +R             R + +   E  +    +V ++  T  
Sbjct: 507 VQKGDYGSQMYEQWIVDVQKRC------------RLLQFTDPEEER----RVCRALYTYT 550

Query: 616 QNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEG 675
           ++  + N  L +                   E A +K     +DS    +   +++  E 
Sbjct: 551 EHLRKYNDALIIN------------------EDARTKDALDFMDSFITDISNASSDPTEH 592

Query: 676 ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAA 734
            L+D +       + V      A+ K  PK++ L  IL  +Y +    R ++FV     A
Sbjct: 593 HLIDLYHAQRERLLQV-----AAEEKQNPKLEELQFILDEEYGNNVQTRTVLFVRTRALA 647

Query: 735 LVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQET-----IAKFRDGRVT-LLVATS 788
             L K   E  SL F+K   LIG     ++    M  T     +  F+    + +L+ATS
Sbjct: 648 DALKKWIEETESLKFLKPGVLIGRGRKSQLTGSGMTLTGQKGVLDSFKSSNESKILIATS 707

Query: 789 VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIER 834
           VA+EG+DI QCN+V+ ++    V+  +Q RGR R  GS   L+  R
Sbjct: 708 VADEGIDIPQCNLVLMYEYVGNVVTMVQVRGRGRAQGSRCFLISSR 753


>gi|328770756|gb|EGF80797.1| hypothetical protein BATDEDRAFT_24696 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1641

 Score =  134 bits (337), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 223/544 (40%), Gaps = 109/544 (20%)

Query: 1246 GKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKK-QPLIRGRGV 1304
             +++ V  + Y+    +  P+        ++++   YY  +   +   K  QPLIRG  +
Sbjct: 988  SRKYTVLDVCYDKNPSTVIPKM------FKFNTVKSYYMNQLKYQDTIKDDQPLIRGLSI 1041

Query: 1305 SYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
                    P  +  + +    E         +L P+   ++P+  + +  A  LP I ++
Sbjct: 1042 P-------PPVQTKQLRLVNHE--------AYLLPQFLGVYPIKRTHLHQALVLPLITQK 1086

Query: 1365 VESMLLAIQLKDKINYPVP-----------ASKILEALTAASCQET-FCYERAELLGDAY 1412
            +    LA  +K      +              K+L+  T +S     + YER E LGD++
Sbjct: 1087 IWHYFLARDIKYGYGLTLANQAFTGSQFSATPKLLQIATTSSASNMGYSYERLETLGDSF 1146

Query: 1413 LKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP 1472
            LK   S  LF + P K+EG +T+ R ++  N VL+Q AL  GLQ +I         W  P
Sbjct: 1147 LKIHQSLHLFCRNPFKNEGWMTQQRIKIEKNQVLHQKALDAGLQHFILTKPLTKRNWVPP 1206

Query: 1473 GVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSS 1532
                                            KN    ++                 +S+
Sbjct: 1207 A-------------------------------KNIRLNQE-----------------ISN 1218

Query: 1533 KTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQVESDPEE------VGCPSRPACVP-- 1583
            KTLA  +EA+IG    EGG + AA  + + +  + E+D             + P+     
Sbjct: 1219 KTLAGSIEAVIGACVEEGGVEQAALAVSRLLSDEYETDWSNYHHDLYTSIQASPSSTDYY 1278

Query: 1584 ESVLR--SVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 1641
            ESV+    +    +E+ +   F+D+ LL EA+TH+     G S +QRLEF+GDAVL +L 
Sbjct: 1279 ESVVHVDPIATKQIEEQIGYTFRDKTLLWEALTHSGTGKLG-SMFQRLEFLGDAVLSYLA 1337

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
             +HL+     L PG L+ LRA  V N+  A V+++  L  ++RH    ++  I  F   V
Sbjct: 1338 MQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRHTDMTMEAAIGRFTAWV 1397

Query: 1702 LEELLKPGFNSFGLGDC---------------KAPKVLGDIVESIAGAIFLDSGRDTSVV 1746
               L         +                   APK  GD+ ES+ GA+F+DS  D   V
Sbjct: 1398 QGYLASESSTPLPISTSATQIASARLFWNKGNTAPKTAGDVYESMLGAVFVDSQFDIHCV 1457

Query: 1747 WQVF 1750
              +F
Sbjct: 1458 QSMF 1461



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 149/786 (18%), Positives = 273/786 (34%), Gaps = 192/786 (24%)

Query: 337  LIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEV-------IREQTGYVVGH--YCGEMG 387
            L   I N +Q++N   + V L P +  +Y+ + +       + ++T ++  H        
Sbjct: 112  LSNQIYNLIQKEN---VVVALPPNINKIYKTSVILVPSSCSVIKKTQFINTHSKLHTNYT 168

Query: 388  QDFWDAQRWQREFDTKQ-----VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKH 442
            +D    +  Q EF TK+     ++VMTA  L+++L    + M   NL++ DECH      
Sbjct: 169  EDINIVEDLQTEFWTKKPIQADIVVMTASTLMHLLNKKYVLMSEFNLVVFDECHSICSDQ 228

Query: 443  PYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKD 502
             + L +  ++   +K       G+T+    L   +    C   +C L++KL S       
Sbjct: 229  SHRLFLHTYWTFNAKNISWRTLGVTS----LSNFNKDNLCD-SLCELQNKLLSKAVVSNM 283

Query: 503  RKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAG 562
            + ++    P P+E VV +                                       DA 
Sbjct: 284  QGDICLFKPPPTETVVYF---------------------------------------DAS 304

Query: 563  AKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVA-QSFLTALQNDERA 621
              + +  +Y    +   + A +L  +L  ++      G WC  ++   + L  L+  + A
Sbjct: 305  LSQSMPHIYDDIHKKCPELAQDLYCQLNVLSELCNLFGSWCVERLLDMTILWYLRKLKCA 364

Query: 622  N-YQLDVKFQESYLS-----KVVSLLQCEL-VEGAVSKKDAKVVDSENGFVEGGTNEIEE 674
              ++  +   +S L+     K  S  +C L    AV   D + +             I +
Sbjct: 365  ALFKTSMPVHDSSLTSCHNQKNDSFFECNLDCSKAVLYFDTRDI-------------ISQ 411

Query: 675  GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAA 734
             ELLD          D +    +   K+  +   ++K    +  +  F        +   
Sbjct: 412  AELLD----------DPLFSNPLWKTKLNSRSDRIVKFCTDHIVSSKF-------GLKHN 454

Query: 735  LVLPKVF--AELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEE 792
            L+LP  F  A  P+L  +K   L   N    M T     +I  FR G   LL+ T + EE
Sbjct: 455  LILPCTFMIASHPNLIVLKPLVL---NEPLGMDTSDNSISIDAFRKGNCNLLITTWIPEE 511

Query: 793  GLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEET 852
              DI   +VVI++D    V  Y Q + R     S +I+++ +          + +  E  
Sbjct: 512  ICDITPIHVVIQYDADMQVSDYKQYQKRQCFSESQFIVLMGKSAKDEPNCFMDIQQKESQ 571

Query: 853  LRKEAIERTDLSHLKDTSRLISVDAVPG-------------------------------- 880
            +    I+     H +  S  +  D V G                                
Sbjct: 572  MHAMPIQLLLDDHQQAVSSKLRCDQVTGMSLESTLDSISSPFSESPLVAPCSPTYHHRET 631

Query: 881  ------------TVYQVESTGAVVSLNSAVGLIHFYCSQL--------PSDRY------- 913
                          Y++ ++ +V+ L  ++ ++H YC+ L        P  RY       
Sbjct: 632  LDTFTSESLSQDITYEIPNSNSVIRLADSIRILHEYCATLTVNNVQYKPQYRYMQSKSLL 691

Query: 914  ---SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACK 970
                I+ P++I +  +K  GP                        S ++A++   L   K
Sbjct: 692  FYVEIVMPDYIRQECQKTIGPENV---------------------SKKIAKRMAALKLVK 730

Query: 971  KLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEPLPGTARHREF--YPEGVADILQGEWIL 1028
            +LH  G     L     +   + +   +D+ EP   T     F  +P  +  +    W +
Sbjct: 731  QLHLCGELDKFLEKSNVTALAKTRKKMHDQVEPASITPSFGSFDIFPLNIPTVFDCTWTV 790

Query: 1029 SGRDGC 1034
               D C
Sbjct: 791  ---DAC 793


>gi|45385112|gb|AAS59532.1| DEAD/H box polypeptide RIG-I [Mus musculus]
          Length = 926

 Score =  134 bits (337), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 256/585 (43%), Gaps = 92/585 (15%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF  
Sbjct: 243 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHRLKKFPCGQKGKVVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N
Sbjct: 299 NQIPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVN 354

Query: 416 ILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPV 471
            L + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V
Sbjct: 355 NLNNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSL 529
            +    +  +    IC L + LD SV+ T++D   ELE+ V  P ++     K AS  S 
Sbjct: 414 GVGDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKIS---RKVASRTS- 469

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
                  +  + +  + + + +K            EEL +++ +  R             
Sbjct: 470 ----NTFKCIISQLMKETEKLAK---------DVSEELGKLFQIQNR------------- 503

Query: 590 RAINYALGELGQWC--AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV- 646
               +   +  QW    +K    F            Q+  K +ES + K + L    L  
Sbjct: 504 ---EFGTQKYEQWIVGVHKACSVF------------QMADKEEESRVCKALFLYTSHLRK 548

Query: 647 --EGAVSKKDAKVVDSENGFVEGGTNEIEEG-------ELLDSHVVSGGEHVDVIIGAAV 697
             +  +  +DA++ D+ N +++   +++ E        EL         E   V  G + 
Sbjct: 549 YNDALIISEDAQMTDALN-YLKAFFHDVREAAFDETERELTRRFEEKLEELEKVSRGPSN 607

Query: 698 ADGKVTPKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLI 756
            +    PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L 
Sbjct: 608 EN----PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILT 663

Query: 757 GH---NNSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
           G    N +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+
Sbjct: 664 GRGRTNRATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVI 723

Query: 813 AYIQSRGRARKPGSDYILMIERGNL---SHATFLRNARNSEETLR 854
             IQ+RGR R   S   L+    ++     A  ++    +E  LR
Sbjct: 724 KMIQTRGRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILR 768


>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
          Length = 1842

 Score =  134 bits (336), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 160/625 (25%), Positives = 270/625 (43%), Gaps = 100/625 (16%)

Query: 599  LGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVV 658
            LG WC   V Q +   LQ +E  + +L  + ++++  K V     E +E  V +K  + +
Sbjct: 641  LGSWC---VDQIWTFCLQEEE--SKKLQARTEQAHHKKRVP----EPLE--VLEKRKEQL 689

Query: 659  DSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL-KYQ 717
            +     VE  T E         H  S    +D           ++ KV +L+ IL  ++Q
Sbjct: 690  EQAKSIVENHTFE-------PPHFAS--RLLDDFTTKVHYSNNLSTKVVALLSILKDRFQ 740

Query: 718  HTEDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ--EMR-TFQMQE-T 772
               + + I+FV ER  A L+   +        F+K+A L+G  ++   EM  TF+ Q  T
Sbjct: 741  RPTNDKCIVFVKERYTARLLASLLSTPEAGTPFLKAAPLVGTTSASAGEMHITFRSQTLT 800

Query: 773  IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
            +  FR+G++  L+ATSVAEEGLDI  CN+V+RFDL  TV+ YIQSRGRAR   S Y  M+
Sbjct: 801  MHNFRNGKINCLIATSVAEEGLDIPDCNLVVRFDLYNTVIQYIQSRGRARHINSRYYHMV 860

Query: 833  ERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL----ISVDAV-----PGTVY 883
            E  N          R  +E L+ E + +   S L +  +L     ++D          +Y
Sbjct: 861  ESHNEEQ------IRTIKEVLKHEKMLKLFASALPEDRKLTGNNFNMDYFLRKERGHRIY 914

Query: 884  QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN 943
             V ++ A ++   ++ ++  +   LP    S+LR ++++   +K     ++ C+  LP  
Sbjct: 915  PVPNSDAKLTYRMSLTVLSAFVDSLPRAPESVLRVDYVVTTVDK-----QFICEAILPEE 969

Query: 944  APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPD-KGSGEQQEKVDQNDEGE 1002
            AP     G   ++ ++A+ +     C  LH+ G   D LL   K S           +G 
Sbjct: 970  APIRGAIGRPATTKQVAKCSAAFETCVILHQKGYINDYLLSTFKRSAHMMRNALLAVDG- 1028

Query: 1003 PLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNN--------GI 1054
                  + +E Y       L   W   G+ G     +F++ + ++K  +N        G+
Sbjct: 1029 ------KKQEAYDMQTKPTL---WSSKGKQG-----IFYMTVLSLKSPDNLDRASQPLGL 1074

Query: 1055 SKDPFLTQVSDFAVLF-------------SSELDAELASLKNFHVRLMSIVLDVDVEPYT 1101
                 L  + +F + F             +S +  E   L   ++  + +  DV  + Y 
Sbjct: 1075 LTRSPLPDLPEFVLHFGAGRNSPTSCVPLASSITLEKNKLDQVNMFTLCLFQDVFSKAYK 1134

Query: 1102 TPWDP-AKAYLFVP------VVSDKSVDPMNELDWDLVEKITKTD------AWTNPLQRA 1148
            +  DP +  Y  VP      +V  KS +PM+ +DW+ VE +   +       W +     
Sbjct: 1135 S--DPDSMPYFLVPINCLNAIVDWKSQNPMSIIDWETVEYVQDFENKQADKPWEHKPWLG 1192

Query: 1149 RPDVYLGTNERT--LGGDRREYGFG 1171
            +PD Y      T    G R+ +  G
Sbjct: 1193 KPDDYFKDKFITDPFDGSRKLWSVG 1217



 Score =  120 bits (301), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 111/226 (49%), Gaps = 49/226 (21%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           E  R YQL++ E+AKK+N IA L+TG+GKT IAVLL+R I +                  
Sbjct: 421 ESPRDYQLELFEKAKKQNIIAVLDTGSGKTFIAVLLLRWIID------------------ 462

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
               Q+ E       + V  +             W++  DT  V+V TA+IL   L HS 
Sbjct: 463 ----QELEDRAIGKPHRVSFFL------------WKKRLDTNMVIVCTAEILRQCLHHSF 506

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPV----NLKG 475
           + M  INLLI DE HHA K HPY+ ++ +FY   +++    P +FGMTASPV    N+K 
Sbjct: 507 VTMAQINLLIFDEAHHAKKDHPYARIIKDFYRNDTEKDIALPKIFGMTASPVDARDNVKK 566

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
            + +         LE  L S +CT +D   L+  +    E +  YD
Sbjct: 567 AAEE---------LEGLLHSQICTAEDPSLLQYSIKGKPETLAYYD 603



 Score =  119 bits (299), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 157/609 (25%), Positives = 241/609 (39%), Gaps = 119/609 (19%)

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            ++QP+I    +S  +NLL       +E +G   E   K++ +  P +   + PLP ++  
Sbjct: 1264 EEQPVIEATYISLRRNLL-------DEFDGGELETSKKSFIILEPLK---VSPLPTTVGA 1313

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF----- 1400
             A  LP+I+ RVES L+A++  D ++  +     LEA+T  S         Q  F     
Sbjct: 1314 MAYLLPAIIHRVESYLIALEATDLLHLDIRPDLALEAVTKDSDNSGEHGEEQTNFQRGMG 1373

Query: 1401 -CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
              YER E LGD +LK   S  L+   P   E +    R  ++ N  L+  AL   L  YI
Sbjct: 1374 NNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYKYI 1433

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            ++  F    W   G                      +   K  T  N ++          
Sbjct: 1434 RSAAFNRRAWYPEG--------------------PELLRGKTATAPNTHK---------- 1463

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
                      L  K++ADV EA+IG   +      ++H  K +   V +  E V   +  
Sbjct: 1464 ----------LGDKSVADVCEAMIGAALL------SHHESKSMDNAVRAVTEVVNSDNHN 1507

Query: 1580 ACV----------PESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASR--PSS 1621
            A V          P+    +     ++ A +++      FK   LL  A  H +      
Sbjct: 1508 AVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIYE 1567

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
             + CYQRLEF+GD++LD      LF ++    P  LT+ + A V+N+    + VK   H 
Sbjct: 1568 QIPCYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGFHK 1627

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC-------------KAPKVLGDIV 1728
            HL    S + + I D+  ++ E L++   ++  +G               + PK L DIV
Sbjct: 1628 HLLTLDSQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPDIV 1687

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLL-----DPMVTPETLPMHPVRELQERCQQQAEGLE 1783
            E+  GAIF+DS  D   V + F+  +     D  +       HP   L    Q+   G E
Sbjct: 1688 EAFIGAIFVDSEYDYGEVEKFFEMHIRWYFEDMGIYDTYANKHPTTFLTNFLQKNM-GCE 1746

Query: 1784 YKASRS---------GNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAE 1834
              A  S          N+    V I    V  A     + A+  AARNAL  L   E   
Sbjct: 1747 DWAPVSKEVPGEDGRKNVVVCGVIIHNKVVSTATAESMRYARVGAARNALRKL---EGMS 1803

Query: 1835 AKEKGDENG 1843
             +E  DE G
Sbjct: 1804 VREFRDEYG 1812


>gi|217069801|gb|ACA61272.1| retinoic acid inducible protein I [Anas platyrhynchos]
 gi|388897634|gb|AFK82315.1| retinoic acid inducible protein I [Anas platyrhynchos]
          Length = 933

 Score =  134 bits (336), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 252/557 (45%), Gaps = 79/557 (14%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           ++AR YQ+++ + A   KN +    TG+GKT +++L+      ++    +K   VFL  K
Sbjct: 244 KKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMP-AGRKAKVVFLATK 302

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           VP+  QQ  V +   E+ GY V    G  G++F +    ++  +   ++V+T QIL+N  
Sbjct: 303 VPVYEQQKNVFKHHFERQGYSVQ---GISGENFSNVSV-EKVIEDSDIIVVTPQILVNSF 358

Query: 418 RH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTAS--PVN 472
              ++  +    L+I DECH+    HPY+++M+ +      S  + P + G+TAS    N
Sbjct: 359 EDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGN 418

Query: 473 LKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLH 530
            K +   ++    IC+L S LD   + T+++  +EL++ +  P     E D       +H
Sbjct: 419 AKNIEETIE---HICSLCSYLDIQAISTVRENIQELQRFMNKP-----EIDVRLVKRRIH 470

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
                       AA  S+  S+ + +          +R +Y V   +++           
Sbjct: 471 NPF---------AAIISNLMSETEAL----------MRTIYSVDTLSQNSKK-------- 503

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---E 647
             ++       W      +  L  L++ E          +ES + + + +    L    +
Sbjct: 504 --DFGTQNYEHWIVVTQRKCRLLQLEDKE----------EESRICRALFICTEHLRKYND 551

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDV-IIGAAVADGKVTP 704
             +  +DA+++D+ +   E  TN ++ G    L+ H+ +  +  +  +I  +  +    P
Sbjct: 552 ALIISEDARIIDALSYLTEFFTN-VKNGPYTELEQHLTAKFQEKEPELIALSKDETNENP 610

Query: 705 KVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           K++ L+ IL   Y++    R ++F +       L K   E P L+++K   L+G     +
Sbjct: 611 KLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQ 670

Query: 764 MRTFQMQ------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                +       +     +D R  LL+ATSVA+EG+DI QCN+V+ ++ +  V   IQ 
Sbjct: 671 TTGMTLPSQKGVLDAFKTSKDNR--LLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQV 728

Query: 818 RGRARKPGSDYILMIER 834
           RGR R  GS  IL+  +
Sbjct: 729 RGRGRAAGSKCILVTSK 745


>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1476

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 111/201 (55%), Gaps = 13/201 (6%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN---DLQRQNKKMLAVFLVPKV 361
           R YQ+D+ E+AK++NTI  L+TG+GKT IAVLL+R +     + Q+Q K+  A FLV KV
Sbjct: 123 RQYQIDLFERAKEQNTIIVLDTGSGKTYIAVLLLRHVLALELETQQQTKRT-AFFLVDKV 181

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            L  QQ   ++    Y VG   G+        + W  E     V+V TAQILL++L   +
Sbjct: 182 ALCLQQHRFLQANLEYPVGKLYGDKAS----MREWASEIQENMVIVCTAQILLDLLSSGL 237

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
           + M  INLL+ DE HH  K HPY+ +M + Y    K   P +  MTASPV+    S   D
Sbjct: 238 VTMNQINLLVFDEAHHTKKNHPYATIMRDHY-IRMKAHHPRILAMTASPVD----SKTRD 292

Query: 482 CAIKICNLESKLDSVVCTIKD 502
                 +LE+ L S + T+ +
Sbjct: 293 FYAAALDLEATLCSKIATVSE 313



 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 204/506 (40%), Gaps = 85/506 (16%)

Query: 1300 RGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLP 1359
            R RG ++ + L  P F             + +  Y+  P     +  LP  +V  A  LP
Sbjct: 942  RSRGYAFTQGLF-PYFR--------AVGYIYRKAYIQSPNTQANMFQLPVDVVVTAFALP 992

Query: 1360 SIMRRVESMLLAIQLKDKINYPVPASKILEALTA----ASCQETFCYERAELLGDAYLKW 1415
              +  +ES  +A+     I+  +     LEALT        Q +  YER E LGDA+LK 
Sbjct: 993  VAIYSIESAAIAMDACGSIDLAIYPPLALEALTKGEEDVDVQTSKNYERLEFLGDAFLKM 1052

Query: 1416 VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVL 1475
              +  LF   P ++E +    R  ++ N  L+ +A+ +GLQ Y+++  F    W      
Sbjct: 1053 ATTISLFTLIPNRNEFEYHVERMILICNKNLFNHAVDRGLQEYVRSRGFDRRSW------ 1106

Query: 1476 PVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTL 1535
                                              Y D  +  G+        + L+ K++
Sbjct: 1107 ----------------------------------YPDLVLRKGKKHKPVGLTQRLADKSI 1132

Query: 1536 ADVVEALIGVYYVEG--GKDAA-----------NHLMKWIGIQVES--DPEEVGCPSRPA 1580
            ADV EALIG  Y+    G D A           NH MK      E    P     PSRP 
Sbjct: 1133 ADVCEALIGAAYMTEPEGMDLAVKAVTVMVQSKNHRMKKYSDYYEKYVQPAWQTIPSRP- 1191

Query: 1581 CVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEFVGDAVLDH 1639
                  +  +    ++ ++   F+   LL  A  H S P    +  YQRLEF+GDA+LD 
Sbjct: 1192 ------IELLAVGKVKASIGYNFRSPKLLRSAFKHPSYPYEPELPNYQRLEFLGDALLDV 1245

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
             I   LF  Y    P  LT+ + A  +N  F+ + V+  LH H+    S++   I  FV+
Sbjct: 1246 AIVDFLFQRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSIMGHIAGFVE 1305

Query: 1700 EV--LEELLKPGFNS--FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLD 1755
            ++   +   + G     F L     PK L DI+E++ GA++ DS  D + V   F   + 
Sbjct: 1306 QIEKAKSQTEDGVLQLDFWLNTEHPPKALSDILEAVVGAMYEDSKYDYNSVRNFFTKFIA 1365

Query: 1756 PMVTPETL-----PMHPVRELQERCQ 1776
            P     TL       HPV +L +  Q
Sbjct: 1366 PYFQDMTLYDTYAGGHPVTQLTKLMQ 1391



 Score =  106 bits (265), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 223/523 (42%), Gaps = 45/523 (8%)

Query: 705  KVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQ 762
            KV +L +IL   ++  +  R I+FV++   A +L + F      +  + +  ++G   + 
Sbjct: 451  KVDALHEILHDAFESQQSTRCIVFVQKRYIAFLLSEAFNRSALRIQDMTAGFVVGSQPAS 510

Query: 763  E----MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                 M      E++ +FR G +  + AT VAEEG+DI +C+++IRFDL  + + YIQS+
Sbjct: 511  SSIVNMSIKDQIESLNRFRYGEINCIFATQVAEEGIDIPECDLIIRFDLYDSAIQYIQSK 570

Query: 819  GRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT---SRLISV 875
            GRAR+  S Y+ M+ER N+ H   L  A      LR+          + D      L+ +
Sbjct: 571  GRARQTNSVYVNMVERDNIQHRRKLIQATRDVHALRRFCSSLPSDRKINDVEINDGLLGL 630

Query: 876  DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYS 935
             A     ++V  TGA ++ +S+ G++  + S +     +   PE+I+   E      +++
Sbjct: 631  QAKSQISFEVPQTGARLTFDSSRGVLAKFVSSVCGG--ADAHPEYIVTSTEM----GKFT 684

Query: 936  CKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEM----GAFTDM---LLPDKGS 988
              + LP + P +   G    S  LA+ +    AC +L       G F      LLP    
Sbjct: 685  AIVLLPDSCPVKSFSGTPQRSKLLARGSAAFKACIELLNYKYIDGNFRSTLTRLLPKM-- 742

Query: 989  GEQQEKVDQNDEGEPLPGTARHREFYPEGVADILQGEWIL------SGRDGCTGSKLFHL 1042
              +  ++  +++ +   G     E + +     L    +       +GR G     L H 
Sbjct: 743  --RNARLALSEKKQSEYGMKSKPELWAQRATSQLFVTTLSIKGPGPTGRPGRPLCILTHA 800

Query: 1043 FMYTVKCVNNGISKDPFLT-QVSDFAVLFSSELDAELASLKNFHVRLMSIVL--DVDVEP 1099
             + T++ +   I  D   T  +  FAV  +   + ++ASL  F + L + V   D D + 
Sbjct: 801  ALPTIEPIRLWIDNDVQSTLALHQFAVPLTLTGE-DVASLAKFTLILFNDVFSKDFDCDS 859

Query: 1100 YTTPWDPAKAYLFVPVVSDKSVD-PMNE---LDWDLVEKITKTDAWTNPLQRARPDVYL- 1154
             + P+  A   L     + K  D P +E   +DWD+V+      A T P    RP  ++ 
Sbjct: 860  GSLPYFLAPCVLSTAATNLKETDCPWDERTVIDWDIVKGSEVACAPTFPTLLTRPVDFMD 919

Query: 1155 ----GTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAI 1193
                    R      +++       G AF Q   P +   G I
Sbjct: 920  RFVTDPIRRRTAPTEKKFALRARSRGYAFTQGLFPYFRAVGYI 962


>gi|353251997|pdb|4A2P|A Chain A, Structure Of Duck Rig-I Helicase Domain
 gi|353252013|pdb|4A36|A Chain A, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
           Dsrna And Atp Transition State Analogue
 gi|353252014|pdb|4A36|B Chain B, Structure Of Duck Rig-I Helicase Domain Bound To 19-Mer
           Dsrna And Atp Transition State Analogue
          Length = 556

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 253/560 (45%), Gaps = 79/560 (14%)

Query: 299 MPEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           M  ++AR YQ+++ + A   KN +    TG+GKT +++L+      ++    +K   VFL
Sbjct: 3   METKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMP-AGRKAKVVFL 61

Query: 358 VPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
             KVP+  QQ  V +   E+ GY V    G  G++F +    ++  +   ++V+T QIL+
Sbjct: 62  ATKVPVYEQQKNVFKHHFERQGYSVQ---GISGENFSNVS-VEKVIEDSDIIVVTPQILV 117

Query: 415 NILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTAS-- 469
           N     ++  +    L+I DECH+    HPY+++M+ +      S  + P + G+TAS  
Sbjct: 118 NSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVG 177

Query: 470 PVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
             N K +   ++    IC+L S LD   + T+++  +EL++ +  P     E D      
Sbjct: 178 VGNAKNIEETIE---HICSLCSYLDIQAISTVRENIQELQRFMNKP-----EIDVRLVKR 229

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
            +H            AA  S+  S+ + +          +R +Y V   +++        
Sbjct: 230 RIHNPF---------AAIISNLMSETEAL----------MRTIYSVDTLSQNSKK----- 265

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV- 646
                ++       W      +  L  L++ E          +ES + + + +    L  
Sbjct: 266 -----DFGTQNYEHWIVVTQRKCRLLQLEDKE----------EESRICRALFICTEHLRK 310

Query: 647 --EGAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDV-IIGAAVADGK 701
             +  +  +DA+++D+ +   E  TN ++ G    L+ H+ +  +  +  +I  +  +  
Sbjct: 311 YNDALIISEDARIIDALSYLTEFFTN-VKNGPYTELEQHLTAKFQEKEPELIALSKDETN 369

Query: 702 VTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
             PK++ L+ IL   Y++    R ++F +       L K   E P L+++K   L+G   
Sbjct: 370 ENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGR 429

Query: 761 SQEMRTFQMQ------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
             +     +       +     +D R  LL+ATSVA+EG+DI QCN+V+ ++ +  V   
Sbjct: 430 RDQTTGMTLPSQKGVLDAFKTSKDNR--LLIATSVADEGIDIVQCNLVVLYEYSGNVTKM 487

Query: 815 IQSRGRARKPGSDYILMIER 834
           IQ RGR R  GS  IL+  +
Sbjct: 488 IQVRGRGRAAGSKCILVTSK 507


>gi|353251998|pdb|4A2Q|A Chain A, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
 gi|353251999|pdb|4A2Q|B Chain B, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
 gi|353252000|pdb|4A2Q|D Chain D, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
 gi|353252001|pdb|4A2Q|E Chain E, Structure Of Duck Rig-I Tandem Cards And Helicase Domain
          Length = 797

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 135/557 (24%), Positives = 252/557 (45%), Gaps = 79/557 (14%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           ++AR YQ+++ + A   KN +    TG+GKT +++L+      ++    +K   VFL  K
Sbjct: 247 KKARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMP-AGRKAKVVFLATK 305

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           VP+  QQ  V +   E+ GY V    G  G++F +    ++  +   ++V+T QIL+N  
Sbjct: 306 VPVYEQQKNVFKHHFERQGYSVQ---GISGENFSNVS-VEKVIEDSDIIVVTPQILVNSF 361

Query: 418 RH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTAS--PVN 472
              ++  +    L+I DECH+    HPY+++M+ +      S  + P + G+TAS    N
Sbjct: 362 EDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSASQLPQILGLTASVGVGN 421

Query: 473 LKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLH 530
            K +   ++    IC+L S LD   + T+++  +EL++ +  P     E D       +H
Sbjct: 422 AKNIEETIE---HICSLCSYLDIQAISTVRENIQELQRFMNKP-----EIDVRLVKRRIH 473

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
                       AA  S+  S+ + +          +R +Y V   +++           
Sbjct: 474 NPF---------AAIISNLMSETEAL----------MRTIYSVDTLSQNSKK-------- 506

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---E 647
             ++       W      +  L  L++ E          +ES + + + +    L    +
Sbjct: 507 --DFGTQNYEHWIVVTQRKCRLLQLEDKE----------EESRICRALFICTEHLRKYND 554

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDV-IIGAAVADGKVTP 704
             +  +DA+++D+ +   E  TN ++ G    L+ H+ +  +  +  +I  +  +    P
Sbjct: 555 ALIISEDARIIDALSYLTEFFTN-VKNGPYTELEQHLTAKFQEKEPELIALSKDETNENP 613

Query: 705 KVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           K++ L+ IL   Y++    R ++F +       L K   E P L+++K   L+G     +
Sbjct: 614 KLEELVCILDDAYRYNPQTRTLLFAKTRALVSALKKCMEENPILNYIKPGVLMGRGRRDQ 673

Query: 764 MRTFQMQ------ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
                +       +     +D R  LL+ATSVA+EG+DI QCN+V+ ++ +  V   IQ 
Sbjct: 674 TTGMTLPSQKGVLDAFKTSKDNR--LLIATSVADEGIDIVQCNLVVLYEYSGNVTKMIQV 731

Query: 818 RGRARKPGSDYILMIER 834
           RGR R  GS  IL+  +
Sbjct: 732 RGRGRAAGSKCILVTSK 748


>gi|221361577|emb|CAX18337.1| dicel-like 2 [Nicotiana benthamiana]
          Length = 224

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 125/259 (48%), Gaps = 36/259 (13%)

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +P +K+LEA+T   C E F  E  E LGD++LK+  S  LF  Y   HEG LT  +  ++
Sbjct: 1    IPTAKVLEAITTKKCVEKFHLESLETLGDSFLKYAASIQLFKTYENHHEGLLTVKKNSII 60

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
            SN  L +   ++ +  +I+ + F    W  PG          +     FD+E  +   K+
Sbjct: 61   SNAALCKLGCARKIPGFIRNEPFDLKGWLIPG---------DNSQVYNFDEEVLMPSVKM 111

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKW 1561
                                  S   +   SK +ADVVEALIG +   GG+ AA   MKW
Sbjct: 112  Y---------------------SRGRQKTKSKRVADVVEALIGAFLSSGGEVAALSFMKW 150

Query: 1562 IGIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS 1621
            +GI ++     V  PS P   P +  + V+   LE  L  KF D  LLVEA+TH S    
Sbjct: 151  LGIDIDF----VDAPS-PRHFPMNAEKLVNVRYLESLLHYKFHDPSLLVEALTHGSYMLP 205

Query: 1622 GVS-CYQRLEFVGDAVLDH 1639
             +  CYQRLEF+GD VLD+
Sbjct: 206  EIPRCYQRLEFLGDVVLDY 224


>gi|345308281|ref|XP_001509166.2| PREDICTED: probable ATP-dependent RNA helicase DDX58
           [Ornithorhynchus anatinus]
          Length = 781

 Score =  133 bits (334), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 258/562 (45%), Gaps = 81/562 (14%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLV 358
           + AR YQ+++ + A   KNTI    TG GKT +A+++ +   N LQ     ++   VFLV
Sbjct: 97  QNARSYQMELAKPALVGKNTIICAPTGCGKTFVAIMICK---NHLQNMPNGQRGKVVFLV 153

Query: 359 PKVPLVYQQAEVIREQ---TGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            KVP+  QQ  V  EQ     Y V    GE   +       +       ++V+T QIL+N
Sbjct: 154 TKVPVYEQQKAVFIEQFERESYTVAGISGETAGN----TPVEHVIKNSDIIVLTPQILVN 209

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTASPV 471
            L++  +  +    L+I DECH+  K HPY+ +M  +      TS  + P + G+TAS V
Sbjct: 210 SLKNGTVPSLSMFTLMIFDECHNTDKSHPYNKIMINYLDNKLGTSACQLPQIVGLTAS-V 268

Query: 472 NLKGVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEVVVEYD-KAASLWS 528
            +    ++ +    IC L + LD+ ++ T+++   +LEK V  P ++  + + +  +L+ 
Sbjct: 269 GVGDAKNKNEAIQHICKLCACLDAPIISTVRENLDDLEKIVFKPQKLFRKVETRRVNLFK 328

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
             + + Q+    E+ A++   ++                R ++ V  R+           
Sbjct: 329 --DIVSQLMAETEKLAKNVHSKT----------------RCLFEVQNRS----------- 359

Query: 589 LRAINYALGELGQWCA--YKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
                +   +  QW     K+ + F            Q+  K +E  + K + +    L 
Sbjct: 360 -----FGTQKYEQWIVNIQKICKVF------------QIPDKEEERRICKTLFIYTSHLR 402

Query: 647 ---EGAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDV-IIGAAVADG 700
              +  +  +DA+  D+ + ++E   N ++ GE+  ++ +++   E     +   +  + 
Sbjct: 403 KYNDALIIHEDARTTDALD-YLEDFFNHVKSGEVDKIEQYLIQRFEEKQQELKNISRNEQ 461

Query: 701 KVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG-- 757
              PK++ L  +L  +Y    + R I+FV+    A  L +   E P L ++KS  L+G  
Sbjct: 462 NDNPKLKELCFLLEEEYHLNPESRTILFVKTRALANALKRWIEENPKLDYLKSDVLMGRG 521

Query: 758 -HNNSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
             N +  M     ++ +  F+  G   +L+ATSVA+EG+DI QCNVVI ++    V+  I
Sbjct: 522 KRNQATGMTLPLQKDVLETFKASGETKVLIATSVADEGIDIAQCNVVILYEYIGNVIKMI 581

Query: 816 QSRGRARKPGSDYILMIERGNL 837
           Q+RGR R   S   L+  +  L
Sbjct: 582 QTRGRGRAKDSKCFLVSSKEEL 603


>gi|328772805|gb|EGF82843.1| hypothetical protein BATDEDRAFT_23044 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1492

 Score =  132 bits (331), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 221/509 (43%), Gaps = 98/509 (19%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLA--------IQLKDKI---- 1378
            KTY +   P+ C I+P+    +     +P ++R++   LLA        I L +++    
Sbjct: 988  KTYVL---PQFCTIYPVKRLHLYQGLYMPLVIRQLWHRLLATDLYFGKEISLLNRMADHT 1044

Query: 1379 -NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
              + +    +   L A+S    + YER E+LGD++LK   S  LF   P + EG LT  R
Sbjct: 1045 PQFFINIETLQTVLVASSTDLPYSYERLEILGDSFLKIHQSLHLFALNPSQDEGWLTTSR 1104

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVA 1497
                 NL L + A   GLQ  I   RF+  +W  P          K  DS          
Sbjct: 1105 MVAEQNLELCRRATEVGLQGLILTTRFSRKQWVPPA---------KGHDS---------- 1145

Query: 1498 EDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANH 1557
                                          + +  K LADV EA+IG   ++GG   A+ 
Sbjct: 1146 -----------------------------MQSMPKKILADVTEAIIGGCLIDGGIVGASE 1176

Query: 1558 LMKWI---GIQVESDPEEVGCPSRPACVPESVLRSV-DFHAL-----EDALKIKFKDRGL 1608
             ++ +     Q E               P  ++R + D  +L     E  L   F+D+ +
Sbjct: 1177 AVRSLLNRDYQSEWGLYFTQYQLHRNVTPSHLVRFIGDIDSLVTLRIEAVLNYTFQDKSI 1236

Query: 1609 LVEAITHASRPSSGVSC---YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAV 1665
            L EA+TH+S  SS   C   YQRLEF+GDAVL  +ITK+L+    +  PG ++ L++  V
Sbjct: 1237 LWEALTHSS--SSFSICGLNYQRLEFLGDAVLSFIITKYLYTQLGSSSPGVISHLKSEMV 1294

Query: 1666 NNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFN---SFGLGDCKAPK 1722
             N+  A V+++  L   LR   S     +  + ++V+E L +P  +    F      APK
Sbjct: 1295 CNQFLACVSIRLGLIDWLRVKKSDTVWIVDAYAQQVIEHLSQPADSIQKIFWAHMTTAPK 1354

Query: 1723 VLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTP------------ETLPMHPVRE 1770
            + GD+ E+I GAIF+DS      + +V + +L+ ++ P            + +  + + E
Sbjct: 1355 ICGDVYEAILGAIFVDSKFS---IEKVDEFVLNSLIKPWWDHFSQIVQDGKVVLQNSIVE 1411

Query: 1771 LQERCQQ--QAEGLEYKASRSGNLATVEV 1797
            L++   +  +   +EY  +   N ATV +
Sbjct: 1412 LRDLVAEHLKCSAVEYTYTHIQNTATVAI 1440



 Score =  126 bits (316), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 3/175 (1%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI--CNDLQRQNKKMLAVFLVPK 360
           + R YQL + E AK +N IA L TG GKTLIA+LLI  +      +  N+K ++V LVP 
Sbjct: 50  EPRSYQLWLFELAKAENIIAVLPTGTGKTLIALLLIEHMHSIQSPEAANRK-ISVMLVPT 108

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           +PLV QQA+ I+  +    G     +     D + W+   +   V+VMTA+IL   L   
Sbjct: 109 IPLVSQQAQYIKMHSKLRTGFSSEGVSMKKHDFKYWKCALEENDVMVMTAEILKTSLDRG 168

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG 475
            I +  +NL++ DECHHA   HPY ++M   Y   S+  RP +FG+TASP   KG
Sbjct: 169 YISISMLNLIVFDECHHARNLHPYRVLMQTHYALCSEAIRPKIFGITASPAFGKG 223



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 14/214 (6%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           V+PKVQ LI ILL++++ E F  I+FV++   A V+  +    P L F+K   LIGH   
Sbjct: 410 VSPKVQCLIDILLEFRYIESFCGIVFVQQRSYASVIRMLIIAHPDLQFLKPKLLIGHGKR 469

Query: 762 QE-------MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
           +        M +   Q  +  FR G   LL+AT VAEEGLD       IRFD  +T+++Y
Sbjct: 470 KRAVGGLNGMSSTTQQSVVTAFRCGDCNLLIATQVAEEGLD-------IRFDKTQTLISY 522

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS 874
           IQSRGRAR+  S +I+++ + +      L   +  E  L+   ++  +      +S    
Sbjct: 523 IQSRGRARQNCSQFIVLVNKDDQQEEQSLHAIQQKEAHLQSLLVQSVNEKPEAVSSFTCD 582

Query: 875 VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQL 908
            D      Y +  TGAV++L +++  +  YC+ L
Sbjct: 583 SDDSDKFQYNIAHTGAVLNLYNSIKFLQEYCATL 616


>gi|38174359|gb|AAH61198.1| Dicer1 protein, partial [Mus musculus]
          Length = 421

 Score =  131 bits (330), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 165/349 (47%), Gaps = 42/349 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 35  RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 92

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
              V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 93  ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 152

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 153 YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 209

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQ-LKQMEVA 539
           +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+ L ++E A
Sbjct: 210 E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 267

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 268 LD-------------FINDCNVAVHSKERDSTLISKQILSDCRAVLVV-----------L 303

Query: 600 GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCE 644
           G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L  CE
Sbjct: 304 GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHAL--CE 350


>gi|167046024|gb|ABZ10543.1| dicer-like protein C [Trichoplax adhaerens]
          Length = 358

 Score =  131 bits (329), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 100/387 (25%), Positives = 183/387 (47%), Gaps = 60/387 (15%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +LEALT A  ++    ER E LGD++LK++++  LF+ +P+ HEGQLT    ++V N  L
Sbjct: 1    LLEALTLAEAEDDISLERLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNL 60

Query: 1447 YQYALSKGLQSYIQADRFAPSR---WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
             +   S  +  YI    F   +   W  PG                          KL +
Sbjct: 61   LKLGKSTPICEYIIGKPFNLLKNEGWIPPGY-------------------------KLLS 95

Query: 1504 DKNYNEYEDDDMEDGELEGDSS-SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWI 1562
             K  N    D+    +L+GD + +++  SSK++ADV++A++    +E  +  A + + W+
Sbjct: 96   SKVKNL---DEKVTSDLDGDKAVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWL 152

Query: 1563 GIQVESDPEEVGCPSRPACVPE----------SVLRSVDFHALEDALKIKFKDRGLLVEA 1612
                + D +     S  + +P+           +  + +   LE  +   F+++  ++ A
Sbjct: 153  ----DKDIKFTINASAASLLPDDDNISSNEINKIYETNNLERLEKVIGYSFQNKLFMIRA 208

Query: 1613 ITHAS--RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            +TH+S       +   Q+LEF+GD +L ++I +H F S+ +  P +L D + A VNN+  
Sbjct: 209  LTHSSYHHHDIAIESNQKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCL 268

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL-----------KPGFNSFGLGDCK 1719
            A + +   +  ++   S  L R I  F K +  + +           +  F +F   + K
Sbjct: 269  AVIGIAIGVSKYVFQESPDLFRDIDQFAKIITCDYMIDDEMNYNDRTEALFENF-TEEVK 327

Query: 1720 APKVLGDIVESIAGAIFLDSGRDTSVV 1746
             PK + D+VE++ GAI++D+G   + V
Sbjct: 328  IPKPVSDVVEALIGAIYIDTGESIAEV 354


>gi|116283663|gb|AAH19805.1| Dicer1 protein [Mus musculus]
          Length = 427

 Score =  130 bits (328), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 165/349 (47%), Gaps = 42/349 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN----DLQRQNKKMLAVFLVPK 360
           R YQ+++LE A   NTI  L TG+GKT IAVLL + + +    DL    K+   VFLV  
Sbjct: 45  RKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKR--TVFLVNS 102

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
              V QQ   +R  +   VG Y        W  +RW +EF   QVL+MT  + L +L++ 
Sbjct: 103 ANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNG 162

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            + +  INLL+ DECH A+  HPY  +M       S    P + G+TAS +N K    ++
Sbjct: 163 YLSLSDINLLVFDECHLAILDHPYREIMK---LCESCPSCPRILGLTASILNGKCDPEEL 219

Query: 481 DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQ-LKQMEVA 539
           +   KI  LE  L S   T  D   L+++   P E+VV+         L+E+ L ++E A
Sbjct: 220 E--EKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEAA 277

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           ++             F+   +     + R    +S++  SD  A L+            L
Sbjct: 278 LD-------------FINDCNVAVYSKERDSTLISKQILSDCRAVLVV-----------L 313

Query: 600 GQWCAYKVAQSFLTALQ----NDERANYQLDVKFQESYLSKVVSLLQCE 644
           G WCA KVA   +  LQ    +++   ++  + F ++ L K+ +L  CE
Sbjct: 314 GPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHAL--CE 360


>gi|254911056|ref|NP_001157171.1| retinoic acid-inducible gene-I [Salmo salar]
 gi|254692471|emb|CAX48607.2| retinoic acid-inducible gene-I [Salmo salar]
          Length = 962

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 156/608 (25%), Positives = 260/608 (42%), Gaps = 112/608 (18%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVP 359
           ++ R YQ ++ E   + KNT+    TG GKT++A+    +IC + L+ + K    VF+  
Sbjct: 266 KKMREYQRELAEPVFQGKNTVICAPTGCGKTVVAL----AICEHHLKVKGKGAKVVFMAT 321

Query: 360 KVPLVYQQAEVIREQ-----TGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           KV +  QQ ++ ++          +   CG  G    D    +   +   ++V+T QIL+
Sbjct: 322 KVDVFNQQYKLFQDHFQEKDPDIRINGLCGNQG----DQLSMKVVMENNDIIVLTPQILV 377

Query: 415 N-ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT-SKEKR----PSVFGMTA 468
           N +    I  +   +LLILDECH+   KHPY+++M+ +     SKE+     P + G+TA
Sbjct: 378 NAVAGGEITSLSCFSLLILDECHNTTGKHPYNIIMTSYLDAKLSKEQSGQHLPQIVGLTA 437

Query: 469 SPVNLKGVSSQVDCAIKICNLESKLDS-VVCTI-KDRKELEKHVPMPSE----------- 515
           S V +    +Q +    IC L + LDS ++ TI  +  EL+ +V  P +           
Sbjct: 438 S-VGIGSFKNQSEAENNICQLCASLDSRIISTIHTNTDELQSYVHTPEKEFFLVEKRHTD 496

Query: 516 --VVVEYDKAASLWSLHEQLKQME--VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVY 571
             + +  D  A +  L + +  +E   A+E     S +  +W      D   K  + Q+ 
Sbjct: 497 PFIRIIRDIMAKIEGLAKTVYNIESLSAIENRDYGSQKYEQW----IVDVQKKCRVLQLK 552

Query: 572 GVSERTESDGAA-NLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQ 630
              E +    A  N  + LR  N AL                  +  D R    LD    
Sbjct: 553 DQEEESRVCRALYNYTEHLRKYNDAL-----------------IINEDARTKDALD---- 591

Query: 631 ESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVD 690
             YLS  +  ++         ++     D + G + G              + SGG+   
Sbjct: 592 --YLSVFIQQVK-NAGHDETEQRLTAYFDGQQGVLRG--------------LSSGGQ--- 631

Query: 691 VIIGAAVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF 749
                     K  PK+  L  IL  +Y+  ++ ++++FV     A  L     E  SL F
Sbjct: 632 ----------KENPKLDMLQYILEEQYRQNDETKSVLFVRTRALADALKSWIEESDSLKF 681

Query: 750 VKSASLI--GHNNSQ----EMRTFQMQETIAKFR--DGRVTLLVATSVAEEGLDIRQCNV 801
           +K   LI  GH +SQ     M     +  +  F+  D +  +L+ATSVA+EG+DI QCN+
Sbjct: 682 LKPGVLIGRGHKSSQLTGTRMTLNSKKGVLDSFKSFDNQSKILIATSVADEGIDIPQCNL 741

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT 861
           V+ ++    V+  +Q RGR R  GS  IL+ ++ +             +  + KE I   
Sbjct: 742 VLMYEYVGNVVKMVQVRGRGRAQGSKCILVSDKKD--------RIDKEKHNMEKEKIVEK 793

Query: 862 DLSHLKDT 869
            +  L+DT
Sbjct: 794 AIRKLQDT 801


>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
          Length = 1557

 Score =  130 bits (327), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 9/176 (5%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSI-CNDLQRQNKK--MLAVFLVP 359
           + RPYQ +  + A+K N +    TG GKTL++++LIR     D +R+  K     +FL P
Sbjct: 2   EPRPYQAEAFDAARKANVVMVGATGVGKTLVSLMLIRDFYFEDARRRESKNHKWCIFLCP 61

Query: 360 KVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR- 418
              LV+QQA+  +  TG   G Y G+   D+W  ++W+ E D K+VLVMT   LLN+L  
Sbjct: 62  TQELVFQQAKSAQIFTGVRCGPYVGK-DLDYWGVKKWKEEMDNKEVLVMTPNALLNLLHR 120

Query: 419 -HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK--RPSVFGMTASPV 471
            +  + ++ + +L+ DECH A KKHPY+ VM+ FY    K +   P VFGMTASP 
Sbjct: 121 GNEYLSLKDVGVLVFDECHKARKKHPYARVMA-FYLELRKNRGPLPKVFGMTASPT 175



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 145/318 (45%), Gaps = 37/318 (11%)

Query: 702  VTP-KVQSLIKILLKYQH-----TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASL 755
            +TP +V +L+K LL+         ++FR ++FVER   A VL    +   S  F     +
Sbjct: 364  MTPGRVITLVKTLLRVSEQWGDEAKNFRCMVFVERRATARVLSAFLSHSLSGRFC-CGFV 422

Query: 756  IGHNNSQ--EMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
            +G  N++  +    +M +TI  FR G V +LV T    EG+D+ +CN+V+  D  KT  +
Sbjct: 423  VGRANARGDDFGRSRMAQTINMFRAGEVQILVTTDACSEGIDVPECNLVVSMDKIKTSRS 482

Query: 814  YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
             I +RGRAR  G  +++M+E G+      +   R S   +  E I+R  L H K + R+ 
Sbjct: 483  LIHTRGRARSKGGKFVIMVEDGD-----DMERDRVSLMLMESEDIKRFQLGHEKASVRVP 537

Query: 874  SVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTE 933
               + P  V+ +ES+GAVV ++ A  L++   S +  D + +L                 
Sbjct: 538  LRHSHPNMVHHIESSGAVVDMDMATPLMNQALSAVGCDFHPLL----------------- 580

Query: 934  YSCKLQLPCNAPFEKLEGPVCS-----SMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
              C+L+LP       ++  + +     S   A+ AV   A  ++ E G     L P +G 
Sbjct: 581  -ICRLELPSFMGMPTIDTAMLADEHFWSKSQARSAVSFLAVVQMLEKGYIDKRLNPTRGK 639

Query: 989  GEQQEKVDQNDEGEPLPG 1006
                       EG P  G
Sbjct: 640  AAWLRPRSGGGEGSPHQG 657



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 41/233 (17%)

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDP---------------EEVGC 1575
            S KT+ADVVEAL+G   V GG  +A ++M+W+G+   S                  EV  
Sbjct: 1250 SKKTIADVVEALLGAALVAGGNRSAAYIMEWLGLAAASAAATAAAAGEDPAAPPLPEVYV 1309

Query: 1576 PSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASR-----PSSGVSC--YQR 1628
             ++P     S     +   LE  L   F+   L ++AITH S      P   V    YQR
Sbjct: 1310 ATKP-----SARLMGNIRLLEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQR 1364

Query: 1629 LEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLR--AAAVNNENFARVAVKHKLHVHLRHG 1686
            LEF+GDAVL  ++T HL+F+ +   P  LT ++  ++ V N +   +A++  +H H+   
Sbjct: 1365 LEFLGDAVLGWMVTAHLYFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVH-HVLRA 1423

Query: 1687 SSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDS 1739
            S  +   I  F++           N+   G   APK   D++E++ GA+F+DS
Sbjct: 1424 SPKILGHIHAFIE-----------NNGVSGTGTAPKHPADVLEALIGAVFIDS 1465


>gi|432110823|gb|ELK34300.1| Putative ATP-dependent RNA helicase DDX58 [Myotis davidii]
          Length = 883

 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 242/558 (43%), Gaps = 62/558 (11%)

Query: 293 SEAKEKMPEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QN 349
           SEA       + R YQL++   A + KNTI    TG GKT +A+L+     + LQ+    
Sbjct: 185 SEASCTQSPIKPRNYQLELARPALEGKNTIICAPTGCGKTFVALLICE---HHLQKFPPG 241

Query: 350 KKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVL 406
           +K   VF   ++P+  QQ  VI    E+ GY +    G   ++    Q      +   ++
Sbjct: 242 QKGKIVFFANQLPVYEQQKSVILKYFERHGYKIAGISGATVENISVEQI----VENNDII 297

Query: 407 VMTAQILLNILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPS 462
           ++T QIL+N L++  I  +    L+I DECH+  K HPY+++M  +       S +  P 
Sbjct: 298 ILTPQILVNSLKNGTIPSLSVFTLMIFDECHNTSKLHPYNVIMFHYLDQKLGGSSDPLPQ 357

Query: 463 VFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEY 520
           V G+TAS V +    +  +    IC L + LD SVV T+KD  +ELE  +  P +    +
Sbjct: 358 VIGLTAS-VGVGDAKNTTEATEYICKLCASLDTSVVATVKDNLEELEGIIYKPQKF---F 413

Query: 521 DKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD 580
            K  S         + +  + E  + +   +K  F G     + E L Q+          
Sbjct: 414 RKVKS-----RTTNRFKCIISELMKETESLAKSIF-GELGTISLENLSQI---------- 457

Query: 581 GAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSL 640
                    +  N+   +  QW      +  +  L + E+ +      F   Y S +   
Sbjct: 458 ---------QNRNFGTQKYEQWIVAVQKKCAVLHLPDKEKESRICTALFL--YTSHLRKF 506

Query: 641 LQCELVEGAVSKKDA--KVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVA 698
               L+      KDA   + D  +     G +EIE+   L        + ++ I   ++ 
Sbjct: 507 NDALLINEHARTKDALDYLKDFFSNVRSAGFDEIEQD--LTRRFEEKLQELESI---SMD 561

Query: 699 DGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
                PK++ L  IL  +Y    + R I+FV+       L K   E   LSF+K   L G
Sbjct: 562 PSNENPKLKDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEENSKLSFLKPDILTG 621

Query: 758 HNNSQE---MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
              + +   M     +  +  FR  G   +L+ATSVA+EG+DI QCN+VI ++    V+ 
Sbjct: 622 RGKTSQNIGMTLPAQKCVLDAFRASGDKKILIATSVADEGIDIAQCNLVILYEYVGNVIK 681

Query: 814 YIQSRGRARKPGSDYILM 831
            IQ+RGR R  GS   L+
Sbjct: 682 MIQTRGRGRARGSKCFLL 699


>gi|242019168|ref|XP_002430037.1| dicer-1, putative [Pediculus humanus corporis]
 gi|212515099|gb|EEB17299.1| dicer-1, putative [Pediculus humanus corporis]
          Length = 701

 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 5/219 (2%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR-QNKKMLAVFLVPKVP- 362
           R YQ +++E AKK+N+I +L TG GKTLIA+ ++ S   ++++  N+    VF +     
Sbjct: 3   RNYQAELIEIAKKQNSIIYLPTGTGKTLIAIQVLLSKTQEIKKPYNEGGKRVFFIGATKV 62

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LVYQ A+V+   T + +G+Y G+M  D W+   W  EF  KQV+V+TA+IL  +L    I
Sbjct: 63  LVYQLAKVLCTHTKFKIGYYTGDMNVDSWNKDIWLGEFLKKQVMVLTAEILKGLLTLKFI 122

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
             E I+L++ DECHH    HPY  +M EF       K P + G++A+   LK    + D 
Sbjct: 123 GAENISLIVFDECHHGTLNHPYKRIMQEF-KDLPDSKLPLILGLSATL--LKMNIKKTDI 179

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD 521
            I +  +E    + + +I +  ++ +++ +  E ++ Y+
Sbjct: 180 EISLREMEETYRAKIISISENSDITRYMSVCVEKILNYN 218



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 153/336 (45%), Gaps = 41/336 (12%)

Query: 705  KVQSLIKILLKYQHTEDFR---AIIFVERVVAALVLPKVFAEL----PSLSFVKSASLIG 757
            KV+ LI  +  Y ++++F     ++FV R   AL+L  +   L     +   VK   ++ 
Sbjct: 317  KVKLLIDTIRDYFNSDNFDFKCGLVFVHRRQTALLLAFIMQRLRGCDKNFESVKPEFMVA 376

Query: 758  H---NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
                NN     + +  E + +   G + L+ AT++ EEG+D+  CN+VI FD  K   +Y
Sbjct: 377  SSYMNNDFVDISRKKNEIMKRMASGELNLIFATNILEEGIDLPACNLVISFDFPKGYSSY 436

Query: 815  IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLS----HLKDTS 870
            IQSRGRAR   S Y +  +     +   +   R+ E+TL +    R ++S    +L+  +
Sbjct: 437  IQSRGRARNENSIYYIFSDENEKKNEKLIDEYRDFEKTLNERI--RGEISLPDVYLEKCN 494

Query: 871  RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
            +  ++  V       +S    V    A+  +  YC QLP D ++ L PE     ++K G 
Sbjct: 495  KNETISIVG------KSDAIFVDGCMAIACVEKYCGQLPQDMFTFLCPEIF---YKKFGE 545

Query: 931  PTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE 990
                  KL      P + +EG + S+M+ A+++V +   K LHE+    D L        
Sbjct: 546  MKRAFLKLPFNSGIP-DVIEGDLKSNMKEAKKSVFMKTVKLLHELNLIDDSL---NMRQL 601

Query: 991  QQEKVD------------QNDEGEPLPGTARHREFY 1014
            + EKVD            + D+  P PGT   ++ Y
Sbjct: 602  EIEKVDFKSLFPHYKEEEKIDKTLPQPGTRNRKQIY 637


>gi|322798617|gb|EFZ20221.1| hypothetical protein SINV_06556 [Solenopsis invicta]
          Length = 386

 Score =  130 bits (326), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 149/285 (52%), Gaps = 30/285 (10%)

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
            L  D S + +LS+K+L  +    I   +++ G+   N +  +  I + +D  E+      
Sbjct: 60   LLNDKSGFGILSTKSLPKIPSFPI---FMKDGQLNVNVISDYTTIILNNDDIELLKRFHF 116

Query: 1580 ACVPE--SVLRSV---DFHALEDALKIKFKDRGLLVEAITHASRPSSGVS-CYQRLEFVG 1633
                   SV++S    D H LE++  I      ++ +A TH S  ++G++ CYQRLEF+G
Sbjct: 117  LLFTNIISVIKSFMIFDNHNLENSFLIV---PYVIFQAFTHPSYTANGLTECYQRLEFLG 173

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQ 1693
            DA+LD LIT +++    NL PG LTDLR+A VNN  FA +AV++ LH+ L   +  LD  
Sbjct: 174  DAILDFLITCYIYEKCGNLSPGELTDLRSALVNNITFACLAVRYGLHIALLAYAPKLDEI 233

Query: 1694 IRDFVK-------EVLEELLKPGFNSFGLGDCK------APKVLGDIVESIAGAIFLDSG 1740
            I  FVK        V +ELL          +C        PKVLGD+ ES+ GAI+LDSG
Sbjct: 234  IDRFVKFQEDRDYVVNDELLYVLIEE---EECNLVEYVDVPKVLGDLFESLIGAIYLDSG 290

Query: 1741 RDTSVVWQVFQPLLDPMV--TPETLPMHPVRELQERCQQQAEGLE 1783
            +D   +W++   L+   +     ++P  PVR + E    + + LE
Sbjct: 291  KDLVKIWEIIYTLMHKEIDEFSRSIPKQPVRVIYEHTDLRPKFLE 335



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 28/172 (16%)

Query: 1387 ILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN 1443
            I +A T  S      T CY+R E LGDA L ++++ +++ K      G+LT +R  +V+N
Sbjct: 148  IFQAFTHPSYTANGLTECYQRLEFLGDAILDFLITCYIYEKCGNLSPGELTDLRSALVNN 207

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
            +     A+  GL   + A  +AP       ++  F +  +D D  + D+   V  ++   
Sbjct: 208  ITFACLAVRYGLHIALLA--YAPK---LDEIIDRFVKFQEDRDYVVNDELLYVLIEE--E 260

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAA 1555
            + N  EY D                    K L D+ E+LIG  Y++ GKD  
Sbjct: 261  ECNLVEYVD------------------VPKVLGDLFESLIGAIYLDSGKDLV 294


>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
            77-13-4]
 gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
            77-13-4]
          Length = 1381

 Score =  129 bits (324), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 225/538 (41%), Gaps = 107/538 (19%)

Query: 1287 YGVELIFKKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHP 1346
            Y  EL  + +P +     +   +LL P    ++EQ+     +  K Y   LP     +  
Sbjct: 823  YEYELAPQDEPYLVVEKWTRRADLLHPPNNPNQEQK-----VNTKPYGRVLPISYTTVDM 877

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK---ILEALTAASCQETFCYE 1403
            +P  +V+    +PSI+  +   L+A +L   +  PV  +    +LEA+++ S  E   YE
Sbjct: 878  VPKRVVKVGMLIPSIIHEIGVQLVASELSTTLLQPVNINDLQLVLEAISSRSAHEPVDYE 937

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R E LGD+ LK+      + ++P   EG L   + Q+VSN  L++  L  GL  +I +  
Sbjct: 938  RLEFLGDSILKYCTVIQAYAEHPLWPEGLLVPFKDQLVSNKRLHRACLESGLSKFILSKA 997

Query: 1464 FAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGD 1523
            F    ++     P++ +D        F  E+SV              E  D         
Sbjct: 998  FTGRSYSGKKWKPLYLDD--------FLPEESV--------------EPLD--------- 1026

Query: 1524 SSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK--------WI----GIQVESDPE 1571
                R+   K LADVVEALIG  + +GG D A   +         W     G  +  +  
Sbjct: 1027 ----RITGHKNLADVVEALIGASFQDGGMDKALKCISVFLGDKCHWHEAGRGRDILFNSA 1082

Query: 1572 EVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS-SGVSCYQRLE 1630
              G P  P   P           LE+ +   F+ + LL+EA+TH S    +    Y++LE
Sbjct: 1083 LDGVPLPPTLEP-----------LEELIGYSFRKKSLLIEAVTHGSYAGDTHQRSYEQLE 1131

Query: 1631 FVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLH---------- 1680
            F+GDAVLD++I   +F     LP   L  ++ A VN E  A V ++H+L           
Sbjct: 1132 FLGDAVLDYIIVTKVFNVKPPLPHSDLHLIKTAMVNGEFLAFVNLEHRLRRVETDVNADG 1191

Query: 1681 ------------VHLRHGSSAL-DRQIRDFVKEVLEELLKPGFNSFG---------LGDC 1718
                          +R+ S A+ + Q+R    E  E L +   ++           L   
Sbjct: 1192 VTEDTIKTLALWQFMRYTSPAIGNEQVRTV--ERFETLRREIVDAIENGTHYPWTLLARF 1249

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVREL 1771
            +  K   D+ E++ GA+++DSG  T V   VF      P L+ ++  +    HP  EL
Sbjct: 1250 QPKKFYSDLFEALIGAVWVDSG-STEVCEGVFHRFGILPYLERIIRDKVHIKHPKEEL 1306



 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 156/324 (48%), Gaps = 34/324 (10%)

Query: 294 EAKEKMPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNK 350
           E KE+ P  +    R YQ ++LEQ+ ++N I  ++TG+GKT +AVL I+    +L++ + 
Sbjct: 3   EDKEESPAPEIINPRAYQREMLEQSLERNVIVAMDTGSGKTQVAVLRIQV---ELEKSSP 59

Query: 351 KMLAVFLVPKVPLVYQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMT 409
             +  FL   V L  QQ +VI+ Q   V +    G++  D W  + W +  +  +++V T
Sbjct: 60  DKIIWFLGKTVSLCEQQFKVIQRQNPSVSMKILTGQLNIDAWSPEVWPKILNGTRIVVST 119

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMT 467
            +IL + L H  +KM  ++L++ DE H+ VK+     +M  FYH         P++ G+T
Sbjct: 120 FEILHDALTHGFVKMSMLSLIVFDEVHNCVKRSSGRKIMLNFYHEDKNAGLPVPAILGLT 179

Query: 468 ASPVNLKGVSSQVDCAIKICNLESKLDSVVCT-IKDRKELEKHVPMPSEV--VVEYDKAA 524
           ASPV    ++S       I  LE+ +D++  T    R+EL + V  P  V  V EY K +
Sbjct: 180 ASPVISSDLAS-------IETLENTMDAICTTPTVHREELLQCVNKPHLVRSVYEYKKRS 232

Query: 525 SLW----SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESD 580
            L     +LH   + M++  +      SR         R+    + LR     ++    +
Sbjct: 233 ELTNLMRALHTAYQNMDITTDPEVLRFSR--------CRNEENLKRLRDAIMRNDTFSQN 284

Query: 581 GAANLIQKLRAINYALGELGQWCA 604
               L  + R I   L ELG W A
Sbjct: 285 QMKGLWNRSRVI---LEELGSWAA 305



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 133/278 (47%), Gaps = 22/278 (7%)

Query: 720 EDFRAIIFV-ERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQE------- 771
           +D   IIFV ER  A ++   + +  P  +  +  +++G ++S+  RT  M E       
Sbjct: 373 DDVVGIIFVKERTTANVLCDLLNSSPPVRARYRVGAMVGTSSSRS-RTQNMYEFNNGTST 431

Query: 772 -TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
             +  FR G V LLVATSV EEG+D+  CN+V  FD   T+ ++IQ RGRAR   S  I 
Sbjct: 432 QILEDFRSGVVNLLVATSVLEEGIDVPACNLVACFDETTTLKSFIQRRGRARMQESKMIA 491

Query: 831 MIERGNLSHATFLRNARNSEETL-RKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTG 889
           M      S  T  R     EE + R+   ++ +L  L + +R    D++    Y ++S+G
Sbjct: 492 M-----ESSLTSSRTWEELEEGMKRRYQDDQRELERLDELARSEQTDSI---YYIIKSSG 543

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
           A + L++A   +  +C  +    Y   RPE+I ++ +   G       L LP   P    
Sbjct: 544 ARLDLDNARQHLEHFCQVVFKADYVDRRPEYIFQKEQNELGEDMLRAVLTLPSGLPANLR 603

Query: 950 EGPVCSSMRLAQQAVCLAACK---KLHEMGAFTDMLLP 984
           +    SS +  + A+  AA +    L E G  ++ LLP
Sbjct: 604 KFRSSSSWKSEKNAMKDAAFRAYVALIEEGLVSENLLP 641


>gi|319656775|gb|ADV58759.1| retinoic acid inducible protein I [Anser anser]
          Length = 934

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 268/599 (44%), Gaps = 83/599 (13%)

Query: 289 VGKKSEAKEKMP----EEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICN 343
           +G  +E  +K P     ++AR YQ+++ + A   KN +    TG+GKT IA+L+      
Sbjct: 227 LGSAAEGIDKPPPVYEAKKARSYQIELAQPAINGKNALICAPTGSGKTFIALLVCEHHFQ 286

Query: 344 DLQRQNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREF 400
           ++    +K   VFL  KVP+  QQ  V +   E+ GY +    G  G++F +    +   
Sbjct: 287 NMP-AGRKGKVVFLATKVPVYEQQKNVFKQHFERQGYSIQ---GVSGENFSNVSV-ENVI 341

Query: 401 DTKQVLVMTAQILLNILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTS 456
           +   ++V+T QIL+N     ++  +    L+I DECH+    HPY+++M+ +      + 
Sbjct: 342 EDNDIIVLTPQILVNSFEDGTLTSLSVFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSP 401

Query: 457 KEKRPSVFGMTAS--PVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPM 512
             + P + G+TAS    N K +   ++    IC+L S LD   + T+++  ++L++ +  
Sbjct: 402 ASQLPQILGLTASVGVGNAKNIEETIE---HICSLCSYLDIQAISTVRENIQDLQRFMNK 458

Query: 513 PSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYG 572
           P     E D       +H            A   S   S+ + +          +R++Y 
Sbjct: 459 P-----EIDVRLVKRRVHNHF---------AVIISDLMSETEAL----------MRKIYS 494

Query: 573 VSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQES 632
           V   +++             ++   +   W      +  L  L++ E          +ES
Sbjct: 495 VGTVSQNSRK----------DFGTQKYEHWIVVTQRKCRLLQLEDKE----------EES 534

Query: 633 YLSKVVSLLQCELV---EGAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGE 687
            + + + +    L    +  +  +DA+++D+ +   E  TN ++ G    L+ H+ +  +
Sbjct: 535 RICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTN-VKNGPYTELEQHLTAKFQ 593

Query: 688 HVDVIIGAAVAD-GKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELP 745
             +  + A   D     PK++ L  IL   Y +    R ++F +       L K   E P
Sbjct: 594 EKEPELTALSKDETNENPKLEELACILDDAYCYNPQTRTLLFAKTRALVAALKKCMEENP 653

Query: 746 SLSFVKSASLIGHNNSQE---MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNV 801
            LS++K   L+G     +   M     +  +  F+  + + LL+ATSVA+EG+DI QCN+
Sbjct: 654 ILSYIKPDVLMGRGRRDQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDIAQCNL 713

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
           V+ ++ +  V   IQ RGR R  GS  IL+  +  +      +  R  EE + K AIE+
Sbjct: 714 VVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENE--KCNRYKEEMMNK-AIEK 769


>gi|334303056|gb|AEG75816.1| retinoic acid inducible protein I [Anser anser]
          Length = 933

 Score =  129 bits (323), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 265/586 (45%), Gaps = 87/586 (14%)

Query: 302 EQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQN----KKMLAVF 356
           ++AR YQ+++ + A   KN +    TG+G+T IA+L    +C + Q QN    +K   VF
Sbjct: 243 KKARSYQIELAQPAINGKNALICAPTGSGRTFIALL----VC-EHQFQNMPAGRKGKVVF 297

Query: 357 LVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
           L  KVP+  QQ  V +   E+ GY +    G  G++F +    +   +   ++V+T QIL
Sbjct: 298 LATKVPVYEQQKNVFKQHFERQGYSIQ---GVSGENFSNVS-VENVIEDNDIIVLTPQIL 353

Query: 414 LNILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTAS 469
           +N     ++  +    L+I DECH+    HPY+++M+ +      +   + P + G+TAS
Sbjct: 354 VNSFEDGTLTSLSVFTLMIFDECHNTTGNHPYNVLMTRYLEQKFNSPASQLPQILGLTAS 413

Query: 470 --PVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVVVEYDKAAS 525
               N K +   ++    IC+L S LD   + T+++  ++L++ +  P     E D    
Sbjct: 414 VGVGNAKNIEETIE---HICSLCSYLDIQAISTVRENIQDLQRFMNKP-----EIDVRLV 465

Query: 526 LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANL 585
              +H            A   S   S+ + +          +R++Y V   +++      
Sbjct: 466 KRRVHNHF---------AVIISDLMSETEAL----------MRKIYSVGTVSQNSRK--- 503

Query: 586 IQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCEL 645
                  ++   +   W      +  L  L++ E          +ES + + + +    L
Sbjct: 504 -------DFGTQKYEHWIVVTQRKCRLLQLEDKE----------EESRICRALFICAEHL 546

Query: 646 V---EGAVSKKDAKVVDSENGFVEGGTNEIEEGEL--LDSHVVSGGEHVDVIIGAAVAD- 699
               +  +  +DA+++D+ +   E  TN ++ G    L+ H+ +  +  +  + A   D 
Sbjct: 547 RKYNDALIISEDARIIDALSYLTEFFTN-VKNGPYAELEQHLTAKFQEKEPELTALSKDE 605

Query: 700 GKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH 758
               PK++ L  IL   Y++    R ++F +       L K   E P LS++K   L+G 
Sbjct: 606 TNENPKLEELACILDDAYRYNPQTRTLLFAKARALVAALKKCMEENPILSYIKPDVLMGR 665

Query: 759 NNSQE---MRTFQMQETIAKFRDGRVT-LLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
               +   M     +  +  F+  + + LL+ATSVA+EG+DI QCN+V+ ++ +  V   
Sbjct: 666 GRRDQKTGMTLPSQKGVLDAFKTSKDSRLLIATSVADEGIDIAQCNLVVLYEYSGNVTKM 725

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
           IQ RGR R  GS  IL+  +  +      +  R  EE + K AIE+
Sbjct: 726 IQVRGRGRAAGSKCILVTSKTEVVENE--KCNRYKEEMMNK-AIEK 768


>gi|258565145|ref|XP_002583317.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237907018|gb|EEP81419.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1194

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 187/451 (41%), Gaps = 82/451 (18%)

Query: 1329 LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASK-- 1386
            +  T   F P   C I  LP    R    +P ++  +E  L+A +L   I  PV  S   
Sbjct: 672  MHHTAKCFHPASECTIDKLPIQYTRFTLFIPCLIHNIEKTLIADELARTILRPVKFSDLS 731

Query: 1387 -ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLV 1445
             +L A++++  +E   Y+R E LGD+ LK   S  L  K  Q  EG LT  +  +VSN  
Sbjct: 732  LVLTAISSSVAREASNYQRLEFLGDSLLKLYTSIELAAKNLQWPEGLLTSRKSHVVSNSH 791

Query: 1446 LYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDK 1505
            L + A   GL  +I    F+ ++W                                    
Sbjct: 792  LAKAATETGLDRFILTKPFSGAKWRP---------------------------------- 817

Query: 1506 NYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQ 1565
                Y  D +  G+ EG   S RV+S+K LADVVEALIG   ++G  +     +K    +
Sbjct: 818  ---SYNTDHVHAGDEEG---SPRVMSTKVLADVVEALIGAANIDGADEKTLDCLKVFLPE 871

Query: 1566 VESDP--EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV 1623
            +   P  E VG   R A        S+    +E+ L   F  + L++ A+TH S  +S  
Sbjct: 872  INWSPLDESVGLLYRNA-TDSGDEYSMVLPEIEELLGYTFTKKSLVLAALTHPSSTTSRH 930

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVA--------- 1674
            S YQRLEF+GD+VLD ++ + LF S        +  +R A VN +  A +          
Sbjct: 931  S-YQRLEFIGDSVLDIIVVQALFGSPREFAHYNMHLMRTALVNADFLAFLCMNVYVEKDR 989

Query: 1675 ------VKHKLHVHLRHGSSAL-----DRQIRDFV---------KEVLEELLKPGFNSFG 1714
                  +K K+ + +    S L       Q  D V          E L+E +    NS  
Sbjct: 990  GEAVENIKKKVKIEMTKRKSHLWGFMKHSQSWDIVHAQNSAIKQHEELQEEINERLNSSQ 1049

Query: 1715 ------LGDCKAPKVLGDIVESIAGAIFLDS 1739
                  L    A K   DI+ESI GAIF+DS
Sbjct: 1050 SYPWTLLCRLDAAKFFSDIIESILGAIFIDS 1080



 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 31/332 (9%)

Query: 697  VADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP------SLSFV 750
            V   +V+ KV  LI   L+ +H      IIF       ++L  + +  P      +++F+
Sbjct: 150  VEPNEVSTKVNKLID-FLENEHVNGSIGIIFARERSTVVMLTHLLSLHPRTKHIGTIAFL 208

Query: 751  KSASLIGH-NNSQEMRTFQMQET-IAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
             S+S     ++  E+   + Q T +   R+G+  L++ATSV EEG+D+  C++VI FD  
Sbjct: 209  GSSSFASRKSDITELHNTKAQMTALDDLRNGKKNLIIATSVLEEGIDVPACDLVICFDFP 268

Query: 809  KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
            + + ++IQ RGRARK GS + L ++  +  HA  +   +  EET++   +E         
Sbjct: 269  QNLRSFIQRRGRARKKGSKFALFVDIQD--HAA-ISTLKAVEETMKGLYLENERTLEELQ 325

Query: 869  TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
                   D   G  ++++STGA+++L++A   +  +C  L  + Y+   P F+++  E  
Sbjct: 326  LLEEAEEDGYDG--FRIKSTGALLTLSNARNHLSHFCGILACE-YADTEPTFMVQGDELS 382

Query: 929  GGPTEYSCKLQLP--CNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP- 984
            G     S K+ LP        +  G     + R+A++     A   L++ G   D L+P 
Sbjct: 383  G----LSAKVILPNFFEPRLREFRGISTWRTERMAKRDAAFQAYVALYKAGLVNDYLMPI 438

Query: 985  --------DKGSGEQQEKVDQNDEGEPLPGTA 1008
                    D GS E+    + +D  +P    A
Sbjct: 439  NHRENSADDVGSMERPSFANVSDIFDPWATVA 470



 Score = 53.5 bits (127), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 24/161 (14%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            +KF D  L++ AI+  S  +   S YQRLEF+GD++L    +  L       P G LT  
Sbjct: 725  VKFSDLSLVLTAIS--SSVAREASNYQRLEFLGDSLLKLYTSIELAAKNLQWPEGLLTSR 782

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNS--FGLGD- 1717
            ++  V+N + A+ A +           + LDR I    K       +P +N+     GD 
Sbjct: 783  KSHVVSNSHLAKAATE-----------TGLDRFI--LTKPFSGAKWRPSYNTDHVHAGDE 829

Query: 1718 -----CKAPKVLGDIVESIAGAIFLDSGRDTSV-VWQVFQP 1752
                   + KVL D+VE++ GA  +D   + ++   +VF P
Sbjct: 830  EGSPRVMSTKVLADVVEALIGAANIDGADEKTLDCLKVFLP 870


>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1453

 Score =  128 bits (322), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 9/225 (4%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++LE+AKK+N I   +TG GKT +A+ LI  I        +   +  FL P  PL
Sbjct: 23  RLYQAELLEEAKKRNIIIRADTGTGKTFVALSLITWIAAQSPANHDDHRIQAFLAPTRPL 82

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
            +QQAE I++     V  Y G++  + W+  +W  E +   V+V TAQI  +++     K
Sbjct: 83  AHQQAEYIQKHCTLRVKAYTGDLQPELWNIDKWHSELNEVDVIVSTAQIFYDLISKGYWK 142

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE---KRPSVFGMTASPV-NLKGVSSQ 479
           +E ++LLI DE HH  K H Y+ +M   YH  +K+   + P + G+TASP+ N K +  +
Sbjct: 143 LEDVSLLIFDEAHHCRKNHIYNQIMRSHYHRLAKDPTVRLPKILGLTASPIWNYKDL-ER 201

Query: 480 VDCAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKA 523
            D  IK  +L+S L + +  +K   E + +H   P+E VV ++ +
Sbjct: 202 ADSDIK--SLQSALAAQIYEVKTHTEDVCQHNFKPNEKVVYFEPS 244



 Score =  123 bits (309), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 69/451 (15%)

Query: 1323 GEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP- 1381
             + E  + + + + LP +LC    +P S+ +    LPS+ R +   L A  L  ++++P 
Sbjct: 880  SKSESTVVQPHRILLPLKLCKGTHIPRSMWKVFSYLPSLTRLLHDTLQATALFKRLDFPT 939

Query: 1382 VPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            +     ++ALT       + Y+  E LGDA+LK   S  ++L + +K EG ++ +R + V
Sbjct: 940  ISLLHGIQALTPPGGGVPWDYQTLETLGDAFLKLATSVHVYLSHLKKGEGDMSHVRSRSV 999

Query: 1442 SNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKL 1501
             N  L + A        IQA+            LP          +S+  Q  S    + 
Sbjct: 1000 DNAYLRRKA--------IQAN------------LP----------ASILSQHPSTRRRQG 1029

Query: 1502 GTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHL--- 1558
               + ++                   R +  + L+DVVEAL+G  ++ GG +    +   
Sbjct: 1030 APQREFS-------------------RKIPKRVLSDVVEALLGAGFLTGGIELGLKIGTA 1070

Query: 1559 --MKWIGIQVESD-PEEVGCPS--RPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAI 1613
              + + G    S+ P  +G  S    A  P  +L+     ALE  +   FK++ LLV+A+
Sbjct: 1071 LDLCFGGTTPWSERPVNIGLESITHDALEPSILLKC---QALEKKIGYVFKEKLLLVQAL 1127

Query: 1614 THASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV 1673
            TH S  S   +CY+R E++GDAV+D  I +H +  + +     LT  RA  V+N +   +
Sbjct: 1128 THRSANSFMTNCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFL 1187

Query: 1674 AVKH-KLHVHLRHGSSALDRQIRDFVKEV-----LEELLKPGFNSFGLGDCKAPKVLGDI 1727
            A+K   L   + H S   ++   + ++ +     +EE      N F + D   PK+L D+
Sbjct: 1188 ALKKLGLQEIIMHASENFEQACTEAIEAIKPFAKIEEYFSTIDNLFVVFD--PPKILNDV 1245

Query: 1728 VESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
            +E+I GA+F+DSG +    ++    + + ++
Sbjct: 1246 LEAIVGAVFIDSGFNLHTAYRTLDIIFEDVI 1276



 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 34/342 (9%)

Query: 667 GGTNEIEEGELLDSHVVSGGEHVDVIIGAAV-----ADGKVTPKVQSLIKILLKYQ---H 718
           G +N++  G LLD +       +   +   V      + + + KV  L KIL+ Y+   +
Sbjct: 301 GASNQVMSGRLLDPNKQKQIREIIEELEELVNIDDIPETQFSSKVAVLNKILVSYKEKDN 360

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGH--NNSQEMRTFQM-----Q 770
            ++F  I+FVER   A +LP +      L  F++  +L GH   N  ++   +M      
Sbjct: 361 HDNFLCIVFVERRQHAQLLPFLLERNGQLKGFLRPTALTGHAGGNVNDLIGIKMDSRTQN 420

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           + +AKFR G   L +ATSVAEEGLD R C VVIRFDL  T   YIQSRGRAR   SDYI+
Sbjct: 421 KAVAKFRTGEYNLTIATSVAEEGLDFRSCRVVIRFDLITTWKGYIQSRGRARARESDYIV 480

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVE-STG 889
           M+  G  +   +L      EE L+     R +   +++     +    P  + Q+     
Sbjct: 481 MLPNGTTN--KYLEFT-GKEEQLKAALYNRPEDELIEEGEEEWT----PQLICQLAGGKE 533

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRY-SILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE- 947
           ++++ ++A  L++  C  +P D +  ++ P++     E       + C++ LP  A    
Sbjct: 534 SILTYSAATSLLNDVCQLIPPDEFLPVVAPQY-----EITWLGDNFQCQVTLPPMAALHP 588

Query: 948 ---KLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDK 986
                 G   ++ + A+++    ACK L E+       LP +
Sbjct: 589 SQRTFTGLAMATKKDAKRSAAFEACKVLRELDVLNQHFLPQR 630


>gi|340516882|gb|EGR47129.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1376

 Score =  128 bits (321), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 238/579 (41%), Gaps = 101/579 (17%)

Query: 1315 FEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            F H  +      E+  K Y    P     +  +P    +    +P+++  +  ML+A +L
Sbjct: 843  FLHRLQGNPAKNEVSSKPYARVYPLSWATVDTIPARHAQFGMLIPTMIHELGVMLMAKEL 902

Query: 1375 KDKINYPVPASK---ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEG 1431
               +   V  S    + EA++A S  E   YER E LGD+ LK+        + P   EG
Sbjct: 903  AYSVLDEVGISDLQLVKEAISARSASEPVNYERLEFLGDSILKFCACMRAAAEKPDYPEG 962

Query: 1432 QLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVF-DEDTKDGDSSLF 1490
             L+  R ++VSN  LY+ AL  GL  +I    F   +W      P++ DE  + GD +  
Sbjct: 963  YLSYWRDRLVSNSRLYKAALEFGLPRFILTKPFTGQKWR-----PLYLDEVLQQGDVATP 1017

Query: 1491 DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
            ++ K                                   LS+KTLADVVEALIG  YV+G
Sbjct: 1018 EKRK-----------------------------------LSTKTLADVVEALIGASYVDG 1042

Query: 1551 G-KDAANHLMKWI----GIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKD 1605
            G   A   + K++       V++D E +      A VP+          LE  +   F+ 
Sbjct: 1043 GLSKAVTCISKFVPEGSWTSVDADRESLF-----ARVPDGEPLPPPLEPLEKLIGYTFQK 1097

Query: 1606 RGLLVEAITHASRPSS-GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAA 1664
            + LL+EA+THAS  +  G    +RLEF+GDAVLD++I   LF     LP  R+  L+   
Sbjct: 1098 KALLMEALTHASYAADFGTRSLERLEFIGDAVLDNIIVTKLFRLKPALPHFRMHTLKTGL 1157

Query: 1665 VNNENFARVAVKHKLHV-----------------------HLRHGSSALDRQIRDFVKE- 1700
            VN +  A + ++H + +                        LR  S  +  ++++  K  
Sbjct: 1158 VNGDFLAFMTMEHGVQLAADPVVTEEATVEVPETISYLWSFLRQASFPIAIELKETNKRH 1217

Query: 1701 -VLEELLKPGFNS-----FGLGDCKAP-KVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-- 1751
              L E +    ++     + L    +P K   D+ E++ GA+++DSG   +    V Q  
Sbjct: 1218 AALREQIHEAMDNDDHYPWALLAALSPKKFYSDLFEAVLGAVWIDSGSLAACEGMVAQFG 1277

Query: 1752 --PLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVG---- 1805
                +D ++  E    HP  EL      +    E +   S   A    Y   V VG    
Sbjct: 1278 ILKYMDRLLRDEVHVQHPKEELGMWANTETVTYELEMKGSEESAGEREYFCKVFVGKREV 1337

Query: 1806 --VAQNPQKKMAQKLAARNALAVLKEKETAEAKEKGDEN 1842
              V     K+  +   A  AL +L+E+     K +G E+
Sbjct: 1338 VEVRGGVNKEEVKTKGATEALRILREE-----KRRGAED 1371



 Score = 92.4 bits (228), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 14/214 (6%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ+++L+++ K+N I  ++TG+GKT +AVL I+    +L+  +   +  F+ P V L 
Sbjct: 2   RAYQIEMLDKSLKQNVIVAMDTGSGKTQVAVLRIK---KELEICDASKIIWFIAPTVSLC 58

Query: 365 YQQAEVIREQTGYV-VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           +QQ +V++ Q   V +    G    D W    W    DT ++++ T Q+LL+ L H+ + 
Sbjct: 59  HQQHDVLKLQIPAVPMMTLAGNSNIDAWGPDIWAILLDTVRIVISTPQVLLDALDHAYLN 118

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHT--TSKEKRPSVFGMTASPVNLKGVSSQVD 481
           +  + LL+ DE H+ + + P   +M   YH    + E  P+V G+TA+P      S Q +
Sbjct: 119 LGLLALLVFDEVHNCIGRSPGGKIMLHHYHPRKLAGESVPAVLGLTATP------SIQSE 172

Query: 482 CAIKICNLESKLDS-VVCTIKDRKELEKHVPMPS 514
            A  I  LE  +D+  V     R EL K V  P+
Sbjct: 173 LA-DIDALEWLMDARCVSPTLHRDELLKCVKRPN 205



 Score = 85.5 bits (210), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 139/301 (46%), Gaps = 28/301 (9%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-SFVKSASLIGHNN 760
           ++ KV  LI  LL  +  E    IIFVE  V   +L +V +   ++ S  +  +++G +N
Sbjct: 354 ISDKVGKLIFELLSVE--EPTVGIIFVEERVMVAMLAEVLSVNHTITSRYRIGTMVGTSN 411

Query: 761 SQEMRT----FQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
               R     F  +   + +  FR G++ LL+ATSV EEG+D+  CN+VI FD   T  +
Sbjct: 412 YAGRRKAVYDFDQKTDYKDLQSFRSGKINLLIATSVLEEGIDVPACNLVICFDTPTTPKS 471

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERT--DLSHLKDTSR 871
           +IQ RGRAR   S+ +L  +  N   A     A+  E     E  ER   +L  L+D+  
Sbjct: 472 FIQRRGRARSKDSNLLLFFDDAN--PAILKWQAKEEEMNRIFEDEERAIRELGKLEDSES 529

Query: 872 LISVDAVPGTV-YQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
                  P T+ + V STGA +  ++A   +  +C  L    +   RP++I+ R +    
Sbjct: 530 -------PSTISFTVPSTGARLDFDNAKQHLEHFCRVLCPSDFVDSRPDYIIRREQ--DS 580

Query: 931 PTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACK---KLHEMGAFTDMLLPDKG 987
           P   +  L LP   P    +    S  R  + A   AA +    L++     + LLP K 
Sbjct: 581 PLLTAIVL-LPPFLPVNLRQHTSASPWRSEKNATKDAAYQAYIALYDAKLVNENLLPFKS 639

Query: 988 S 988
           S
Sbjct: 640 S 640


>gi|393215463|gb|EJD00954.1| ribonuclease III [Fomitiporia mediterranea MF3/22]
          Length = 1411

 Score =  127 bits (320), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 133/267 (49%), Gaps = 21/267 (7%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESV--- 1586
            L  K +ADV EA+IG  YV GG++ A  + K + + V           +    P  V   
Sbjct: 1049 LGDKAVADVAEAIIGAAYVTGGREIALKVTKALNVPVPHIDRWSDFGRKALAPPPEVTAR 1108

Query: 1587 LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
            LR+    A+E  +  +F    LL +A+THAS   + ++ Y+RLEF+GDA+LD L+ +H++
Sbjct: 1109 LRTGSIQAVEAIIGHQFNHPHLLAQALTHASIHGNEMTSYERLEFIGDAILDFLVIRHIY 1168

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELL 1706
               ++L PG LT L+ A V+N   A V V   LH HL   SSAL++ I+ +  E+ +  L
Sbjct: 1169 DRDSSLSPGALTLLKGAMVSNAALAAVCVWSGLHEHLLFESSALEKSIQSYAVELEQRQL 1228

Query: 1707 -----------KPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT----SVVWQVFQ 1751
                       +PG       D + PK L D+VESI GA+++              +V  
Sbjct: 1229 AEHEQAAREDRQPGQYWV---DVEPPKALSDVVESIFGAVYVSDNFSPIGAEKFFDKVLA 1285

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQ 1778
            P  D  +T  TL  HP + L E  Q Q
Sbjct: 1286 PFYDQHITLHTLSHHPTKILFELFQSQ 1312



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 96/182 (52%), Gaps = 9/182 (4%)

Query: 1295 KQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRG 1354
            KQPLI    V  C +L+S     +  Q  E +    K    +L PELC    +P S+ R 
Sbjct: 767  KQPLIE---VEVCSSLVS-HLNPTARQIAESKHHPAK----YLIPELCVKSTIPASVYRT 818

Query: 1355 AQRLPSIMRRVESMLLAIQLKDK-INYPVPASKILEALTAASCQETFCYERAELLGDAYL 1413
               LPSI+ ++E  LL  +L  K  ++ +    +L A+++ +      YER ELLGDAYL
Sbjct: 819  ISLLPSIISKLEDFLLIKELNAKYFDHSIAEYDLLAAVSSPAAFVDVDYERLELLGDAYL 878

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K++ S +LF+ +P  HEG L   RQ+++SN  L + A   GL  YIQ+   AP  W  P 
Sbjct: 879  KYLSSVYLFVTFPTLHEGALHVSRQRIISNRSLLRNANRCGLPQYIQSKPLAPRMWCPPN 938

Query: 1474 VL 1475
             +
Sbjct: 939  FI 940



 Score = 98.6 bits (244), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 140/332 (42%), Gaps = 44/332 (13%)

Query: 702  VTPKVQSLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHN 759
            +TPK   L+++L   +   D FR IIFV++   A VL  +   L   + F++  +L+GH 
Sbjct: 194  ITPKFARLMEVLKACEPQGDAFRGIIFVQKRSIAYVLADLLRTLDDQIGFIRPQALVGH- 252

Query: 760  NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
                       + +  FR G   LL+AT  AE+ L+I    +VIRFDL ++ ++Y   R 
Sbjct: 253  -------VLQSDVLDAFRTGVYNLLIATKFAED-LEICSATIVIRFDLFESQVSYAHCRA 304

Query: 820  RARKPGSDYILMIERGNLSHATFL----RNARNSEETLRK------EAIERTDLSHLKDT 869
            RAR      I M ERG+  H   L    R  R  E  +++       AI    L    D 
Sbjct: 305  RARGQQCHLIHMAERGSDVHRRILADVARIDRRMERWVQRVTTSVGSAIPPVPLRETVDP 364

Query: 870  SRLISVDAVPGT---VYQVESTGAVVSLNSAVGLIHFYCSQLPSD---RYSILRPEFIME 923
             R  S D          Q  +T   + +  A+ +++ + SQLP+       + +P F  E
Sbjct: 365  YRSDSDDEDNDDPESFVQDPTTSGRIFVQDAMTVVYRFASQLPAAGDVERRLNKPLFEYE 424

Query: 924  R-HEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
               + P   T Y C + LP  AP  ++ G    S   A++  C   C +L+ +GA    L
Sbjct: 425  ELQDGPSSKTMYICTVLLPPGAPLRRVSGSPSPSRSQARRMACYQTCYELYSLGALDYRL 484

Query: 983  LPDKGSGEQQEKVDQNDEGEPLPGTARHREFY 1014
             P                  PLP T   R  Y
Sbjct: 485  FPRP----------------PLPATRPQRTTY 500



 Score = 42.7 bits (99), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 1387 ILEALTAASCQ--ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            + +ALT AS    E   YER E +GDA L ++V R ++ +      G LT ++  MVSN 
Sbjct: 1131 LAQALTHASIHGNEMTSYERLEFIGDAILDFLVIRHIYDRDSSLSPGALTLLKGAMVSNA 1190

Query: 1445 VLYQYALSKGLQSYI 1459
             L    +  GL  ++
Sbjct: 1191 ALAAVCVWSGLHEHL 1205


>gi|20385628|gb|AAM21359.1| melanoma differentiation associated gene 5-like protein [Mus
           musculus]
          Length = 1025

 Score =  126 bits (317), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 151/582 (25%), Positives = 261/582 (44%), Gaps = 93/582 (15%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A   KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 305 PELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVLV 364

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV L  Q   + R++    +  +   +G    D Q    +     +  V++ TAQIL N
Sbjct: 365 NKVMLAEQ---LFRKEFNPYLKKWYRIIGLS-GDTQLKISFPEVVKSYDVIISTAQILEN 420

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFY------HTTSKEKRPSV 463
            L +        +++   +L+I+DECHH  K+  Y+ +M  +       +   K+ +P++
Sbjct: 421 SLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAI 480

Query: 464 -----FGMTASPVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEV 516
                 G+TASP  +     Q +    I N+ + LD+  + T+K+   +L+  +  P + 
Sbjct: 481 PLPQILGLTASP-GVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKK 539

Query: 517 VVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSER 576
            V  D         E+L ++  +++   Q S            D G +   +    + ++
Sbjct: 540 FVIADDTRE-NPFKEKLLEIMASIQTYCQKSP---------MSDFGTQHYEQWAIQMEKK 589

Query: 577 TESDGAAN---LIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 633
              DG        + LR  N AL ++        A S L A   DE+             
Sbjct: 590 AAKDGNRKDRVCAEHLRKYNEAL-QINDTIRMIDAYSHLEAFYTDEK------------- 635

Query: 634 LSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGT-NEIEEGELLDSHVVSGGEHVDVI 692
                             KK A + DS+    E  + N+  +G++  S  +   E  + +
Sbjct: 636 -----------------EKKFAVLNDSDKSDDEASSCNDQLKGDVKKS--LKLDETDEFL 676

Query: 693 IGAAVADGKVTPKV--------QSLIK----ILLKYQHTEDF-RAIIFVERVVAALVLPK 739
           +     + K+  K+        + LIK    IL ++  +E+  R IIF +   +   L +
Sbjct: 677 MNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQ 736

Query: 740 VFAELPSLS--FVKSASLIGHNNSQEMRTF---QMQETIAKFRDGRVTLLVATSVAEEGL 794
              E    +   VK+  LIG  +S E++     + +E I+KFR G + LL+AT+VAEEGL
Sbjct: 737 WIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGL 796

Query: 795 DIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
           DI++CN+VIR+ L    +A +Q+RGRAR   S Y+L+   G+
Sbjct: 797 DIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGS 838


>gi|444714076|gb|ELW54964.1| putative ATP-dependent RNA helicase DHX58 [Tupaia chinensis]
          Length = 680

 Score =  125 bits (315), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 257/592 (43%), Gaps = 128/592 (21%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDRAK----VVVLVNRVHL 59

Query: 364 VYQQAEVI-REQTG-YVVGHYCGEMGQDFWDAQRWQREFDTKQ--VLVMTAQILLNIL-- 417
           V Q AE   R   G + +    G+MG       R    +  +Q  +L+ TA++L   L  
Sbjct: 60  VTQHAEEFGRMLDGRWTMATLSGDMGP------RAGFGYLARQNDLLICTAKLLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRP--SVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y++++S++     +  RP   V G+TASP   
Sbjct: 114 PEEDEHVELTAFSLIVVDECHHTHKDTTYNIILSQYLEHKLRRTRPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSEVVVEYDKAAS----- 525
            G ++++D A+  I  L + LD+  ++     + +L +H   P +   +YD         
Sbjct: 173 -GRATKLDGAVDHILQLCANLDTWRIMSPQNCQPQLWEHNQQPCK---QYDLCHRRSQDP 228

Query: 526 --------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
                   +  +H+ ++  E++ +   Q   +R       A +AG +E  R+VY +  R 
Sbjct: 229 FGDLLKELMDQIHDHMEMPELSRDFGTQVYEQRVVELSQAAAEAGLQE--RRVYAIHLRR 286

Query: 578 ESDGAANLIQ-KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSK 636
            +D  A LI   +RA++              A + L    + ERA  ++ +   E +L  
Sbjct: 287 YND--ALLIHDTVRAVD--------------ALTMLQDFYDKERAT-KVQILRAERWL-- 327

Query: 637 VVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAA 696
                  EL EG                                       H + +   A
Sbjct: 328 ------LELFEG---------------------------------------HRNALTRLA 342

Query: 697 VADGKVTPKVQSLIKILLKYQHTEDF----RAIIFVERVVAALVLPKVFAELPSL-SFVK 751
           +  G   PK++ L +IL     + +     R IIF    ++   L     E PSL + V+
Sbjct: 343 IT-GPENPKLEMLEQILRNQFGSPNSPSSPRGIIFTRTRLSTHSLLLWLQEQPSLQAAVR 401

Query: 752 SASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           +  L G  +S +   M     QE I KFR G + LLVATSVAEEGLDI QCNVV+R+ L 
Sbjct: 402 AQVLTGAGSSSQNTHMTQRDQQEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLL 461

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER 860
              ++ +Q+RGRAR   S Y  +   G          +R     L  EA+ER
Sbjct: 462 TNEISMVQARGRARASQSVYSFVATEG----------SRELRRELTNEALER 503


>gi|328849595|gb|EGF98772.1| hypothetical protein MELLADRAFT_79606 [Melampsora larici-populina
           98AG31]
          Length = 1540

 Score =  125 bits (314), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 30/246 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK-MLAVFLVPKVPL 363
           R YQ ++LE+AK++N I   +TG GKTL+AVLL+  +    +  +++  +  FLVP  PL
Sbjct: 31  RLYQEELLEEAKRRNIIIRADTGTGKTLVAVLLMDWMAVQPKGDDQEHTIQAFLVPTRPL 90

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQA  IR  T   V  Y G++  + W+ ++W  +     V+V TAQI  +IL      
Sbjct: 91  VQQQASAIRSGTTLRVREYTGDLQPELWNVEKWHSDLKQTDVIVCTAQIFYDILSKGFWT 150

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE----KRPSVFGMTASPV-------- 471
           +E ++LL+ DE HH  K H Y+ +M   Y    ++    + P + G+TASP+        
Sbjct: 151 LENVSLLVFDEAHHCRKNHIYNQIMQVHYRRLDRDPDHRRVPKILGLTASPIWDCKSMVR 210

Query: 472 ---NLKGVSSQVDCAIKIC----------NLESKLDSVVCTIKDRK-ELEKHVPMPSEVV 517
              +++ VSS     +K+           +L+S L + +  IK R+ ++EK+   P E V
Sbjct: 211 AEKDIRHVSSN---RLKVSYLKLITFWFRSLQSDLSAQLYEIKVRRHDVEKYANKPKEEV 267

Query: 518 VEYDKA 523
           V +  A
Sbjct: 268 VYFTPA 273



 Score =  111 bits (278), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 62/298 (20%)

Query: 703 TPKVQSLIKILLKYQH--TEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHN 759
           TPK Q+L+KIL KY++   EDF AIIFVER   A +L  + +    L  F+K  +L GH 
Sbjct: 372 TPKFQALVKILSKYENMKAEDFHAIIFVERRTHAQLLNSLISRCAKLKGFIKPGALTGHG 431

Query: 760 NS-------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            +       + M +    +T+ KFR+  + L +AT+VAEEGLD R C +VIRFD   T  
Sbjct: 432 GTVASSGGNRGMDSKSQNQTVEKFRNREINLAIATNVAEEGLDFRACRLVIRFDDITTW- 490

Query: 813 AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRL 872
                +G                               E LR +   R +   + D    
Sbjct: 491 -----KG-------------------------------EELRTQLYGRPEDEEISDA--- 511

Query: 873 ISVDAVPGTVYQV-ESTGAVVSLNSAVGLIHFYCSQLPSDRYS-ILRPEFIMERHEKPGG 930
             +++ P  +  + +   A+++ N++V L++  C  LP D Y+ IL+P+F  E  ++ GG
Sbjct: 512 -ELESTPQLINSLGDGKDAILTHNASVSLLNEVCQLLPHDEYAEILKPKF--EDIQRSGG 568

Query: 931 PTEYSCKLQLPCNA---PFEKL-EGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              + C++ LP  A   P E++ E    +    A+Q+ C  AC+ L   G   +  +P
Sbjct: 569 ---FVCRVTLPPMAALSPSERVFESEPFTKKNKAKQSACFIACRALRSAGVLDEHFMP 623



 Score = 91.3 bits (225), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 10/172 (5%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            AL+  +  +FK   LL++A+TH S  S   +CY+R E++GDA++D  IT+H +  +++  
Sbjct: 1109 ALQHKIGYEFKQPLLLMQALTHRSADSFLTNCYEREEWLGDAIVDLWITEHCYRRFSDST 1168

Query: 1654 PGRLTDLRAAAVNNENFARVAVKH-KLHVHLRHGSSALDRQIRDFVKEVLEELLKPG--- 1709
              +LT  RA+ V N +   +++K   LH  ++H S   ++   D ++++ E  ++ G   
Sbjct: 1169 AAQLTFTRASLVTNASLGYLSLKKLGLHKMIQHDSRHFEKACDDALRDI-ESFIEVGSFY 1227

Query: 1710 ---FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV 1758
                NSF + D   PK+LGD +E+I GAIF+D G   SV ++    + + ++
Sbjct: 1228 DNLTNSFIVFD--PPKILGDALEAIVGAIFIDCGLHLSVAYRSLDKIFEDVL 1277



 Score = 54.3 bits (129), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 1/133 (0%)

Query: 1333 YYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEAL 1391
            + V LP        LP    +    +P++ RR+        L  KI+ P V       AL
Sbjct: 884  FRVLLPLSASQGSRLPSYFWKIFSFIPALTRRLHDASQVQALLKKIDVPHVSLDLATMAL 943

Query: 1392 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            T       + Y+  E +GDA+LK   S  ++L + +K EG ++ +R + V N  L   +L
Sbjct: 944  TQPGIDVPWDYQTLETVGDAFLKLATSVHVYLSHTKKGEGDMSALRSKSVDNEYLRSKSL 1003

Query: 1452 SKGLQSYIQADRF 1464
              GL SY+ + R+
Sbjct: 1004 QAGLGSYVLSSRY 1016



 Score = 45.1 bits (105), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)

Query: 1374 LKDKINYPVPASKIL-EALTAASCQE--TFCYERAELLGDAYLKWVVSRFLFLKYPQKHE 1430
            L+ KI Y      +L +ALT  S     T CYER E LGDA +   ++   + ++     
Sbjct: 1110 LQHKIGYEFKQPLLLMQALTHRSADSFLTNCYEREEWLGDAIVDLWITEHCYRRFSDSTA 1169

Query: 1431 GQLTRMRQQMVSNLVLYQYALSK-GLQSYIQAD 1462
             QLT  R  +V+N  L   +L K GL   IQ D
Sbjct: 1170 AQLTFTRASLVTNASLGYLSLKKLGLHKMIQHD 1202


>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
 gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
          Length = 1393

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 190/460 (41%), Gaps = 95/460 (20%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP-----ASKILEAL 1391
            LP   C +  LP      A   PSI+ + E  L+A QL+  +  PV         +++AL
Sbjct: 871  LPISDCMVDNLPAQYSIFALLFPSILHKFECDLIADQLRTSLLSPVAFQLLDLPLLVKAL 930

Query: 1392 TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYAL 1451
            T++S  E   Y++ E  GD  LK++ S  L    P++ E  LT+ +  +VSN  L + +L
Sbjct: 931  TSSSTGEVEDYQQLEFYGDCILKFISSLHLMAANPKEPESFLTQKKGNIVSNGSLTRASL 990

Query: 1452 SKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYE 1511
            S GL  Y+   RF  ++W                      Q + + E    T        
Sbjct: 991  SAGLDRYVITKRFTGAKW----------------------QPRLLVETVTVT-------- 1020

Query: 1512 DDDMEDGELEGDSSSYRV-LSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WIG 1563
                        S   +V LSSK +ADVVE++IG  +V GG   A   ++       WI 
Sbjct: 1021 ------------SPPNKVKLSSKLIADVVESIIGASFVVGGFPKAFACIQTLLPLENWIS 1068

Query: 1564 IQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV 1623
            I   ++         P     S L  +  H         F  + LL++AITHAS     V
Sbjct: 1069 IPDANNILYDFAQEGPTFTGLSTLERLIGHT--------FSKKFLLLDAITHASYLGPNV 1120

Query: 1624 SC-YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVH 1682
             C YQR EF+GDAVLD +ITK L+     L    +  +R A VN    A    +  +  H
Sbjct: 1121 HCDYQRTEFLGDAVLDFIITKRLYAHTPPLEHQTMHAIRTAMVNASFLAFRMFETTIDEH 1180

Query: 1683 LRHG--------SSALDRQIRDFVKEV---------------------LEELLKPGFNSF 1713
            L +         S AL + +R    +V                     LE   +  ++  
Sbjct: 1181 LTNKATLQTDVQSRALWQFLRSGAPQVNAAREIAFKQHQEARGQILVALERDARYPWHLL 1240

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
             L D   PK L DIVES+ GAI++DS  D S+     Q L
Sbjct: 1241 ALTD--PPKFLSDIVESVLGAIYIDSRGDFSICQAFVQRL 1278



 Score =  100 bits (249), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 130/246 (52%), Gaps = 29/246 (11%)

Query: 693 IGAAVADGKVTPKVQSLIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFV 750
           IG++++  K++ KV+ LI +L+ +     DF  ++FVE+ V    L ++ A  P + S  
Sbjct: 340 IGSSISPSKLSHKVEMLIDLLVSELMENPDFFGLVFVEQRVFVAALAQILATHPQTQSLF 399

Query: 751 KSASLIGHNNSQEMRT--FQMQE------TIAKFRDGRVTLLVATSVAEEGLDIRQCNVV 802
           +  + +G + S + +T    + E      T+  FR GR  L++ATSV EEG+DI  CN+V
Sbjct: 400 RVGTFVGESQSPKRKTNIANLAESRNQGATLDDFRAGRTNLMLATSVLEEGIDISSCNLV 459

Query: 803 IRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTD 862
           + F+  K + +++Q RGRARK  S Y +   +G          +R+SE     EA  R  
Sbjct: 460 VDFERPKNLKSFVQRRGRARKQRSKYFIFTPQGP--------GSRSSEYWQSLEADMR-- 509

Query: 863 LSHLKDTSRLISV--------DAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYS 914
               +D  R++ +        +   G  ++++STGA+++L++A   ++ +C+   +  + 
Sbjct: 510 -RAYEDELRIVKMANEREKVEEEEDGREFRIQSTGALLTLDNACQHLYHFCAVSATGSFV 568

Query: 915 ILRPEF 920
             RP+F
Sbjct: 569 DSRPQF 574



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 7/132 (5%)

Query: 347 RQNKKMLAVFLVPKVPLVYQQAEVIREQT-GYVVGHYCGEMGQDFW-DAQRWQREFDTKQ 404
           +QN  ++  FL P V L  QQ EV +    GY +    G+ G D W D   W       +
Sbjct: 34  QQNIIVVVWFLAPSVTLCEQQYEVFKYNLPGYGIQVLSGKDGVDHWTDQGTWDAVLHNVR 93

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTS-----KEK 459
           +++ T Q+LL+ L H+ ++M  + LLI DE H+    HP   +MS+FY   +     K  
Sbjct: 94  IVLSTHQVLLDALTHAFVRMSKLALLIFDEAHNCTLNHPARRIMSDFYKPFADAADPKSP 153

Query: 460 RPSVFGMTASPV 471
            P + G++ASPV
Sbjct: 154 VPKILGLSASPV 165


>gi|342879789|gb|EGU81025.1| hypothetical protein FOXB_08500 [Fusarium oxysporum Fo5176]
          Length = 580

 Score =  125 bits (313), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 218/505 (43%), Gaps = 85/505 (16%)

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +LEA+++ S +E   Y+R E LGD+ LK+      + ++P   EG L   + ++VSN  L
Sbjct: 10   VLEAVSSPSAREPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNHFKDRLVSNERL 69

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
             +  L KGL  +I +  F   +W                                     
Sbjct: 70   QRVCLEKGLSKFILSKPFTALKWRP----------------------------------- 94

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGG-KDAANHLMKWIGIQ 1565
               Y DD +++   +       V  SKTLADVVEALIG  Y +GG   A   +  ++G  
Sbjct: 95   --RYLDDILKE---KSAPRPAPVDGSKTLADVVEALIGASYQDGGLTKALKCISVFLGDS 149

Query: 1566 VESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSS-GVS 1624
                 E V      A  P  V    +   LED +K KFK + LL+EA+TH S  ++    
Sbjct: 150  CNWHQEGVARDILFAAAPSDVQLPSNLEPLEDLIKYKFKKKSLLIEAVTHGSYAAAMQEK 209

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARV----AVKHK-- 1678
             Y++LEF+GDA+LD+++   +F     +P GRL  ++ A VN E  + V    +++ K  
Sbjct: 210  SYEQLEFLGDAILDYIVVTKMFQHDPPIPTGRLHMIKTAIVNGEFLSLVNLVNSIQRKDL 269

Query: 1679 ----------------LHVHLRHGSSAL-------DRQIRDFVKEVLEELLKPGFNSFGL 1715
                            L   +R  SS +       + +     +E++  L   G   + L
Sbjct: 270  EVRPDGELVTKTTALPLWKFMRFNSSEMANVMVETEEKFESMRRELVIALWGDGHYPWAL 329

Query: 1716 GDCKAP-KVLGDIVESIAGAIFLDSG--RDTSVVWQVFQPL--LDPMVTPETLPMHPVRE 1770
                 P K   D+ E++ GA+++DSG   + + V + FQ +  L+ ++  +    HP  E
Sbjct: 330  LARLHPQKFYSDMFEALLGAVWVDSGSIEECTRVLETFQVMDYLEFVIKEDIHVQHPKEE 389

Query: 1771 LQERCQQQAEGLEYKAS---RSGNLATVEVYIDGVQVGVAQNPQKKM-AQKLAARNALAV 1826
            L +   +Q   ++Y  +         +  V I    VG  +    K+ A   AA NA+ +
Sbjct: 390  LSKFADRQK--MKYTTTLIEEPEPRWSCGVTIGERLVGEVEGSLNKVEAMTKAAENAIRL 447

Query: 1827 LKEKETAEAKEKGDENGKKRKNGTQ 1851
            L E+  AE  +   E+  +R +  Q
Sbjct: 448  LTEEMNAEGDQ---EHASQRDDLAQ 469



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTD 1659
            +  K+  L++EA+   S PS+     YQRLEF+GD++L        +  + + P G L  
Sbjct: 2    VGIKNLQLVLEAV---SSPSAREPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNH 58

Query: 1660 LRAAAVNNENFARVAVKHKL-HVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
             +   V+NE   RV ++  L    L    +AL  + R ++ ++L+E   P          
Sbjct: 59   FKDRLVSNERLQRVCLEKGLSKFILSKPFTALKWRPR-YLDDILKEKSAP-----RPAPV 112

Query: 1719 KAPKVLGDIVESIAGAIFLDSG 1740
               K L D+VE++ GA + D G
Sbjct: 113  DGSKTLADVVEALIGASYQDGG 134


>gi|402588900|gb|EJW82833.1| hypothetical protein WUBG_06256 [Wuchereria bancrofti]
          Length = 304

 Score =  124 bits (312), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 150/312 (48%), Gaps = 35/312 (11%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVPKVP 362
           R YQ+++L++A K+N I  L TG+GKT IAVLLI+     L    +N    A FLV KV 
Sbjct: 16  RDYQVELLDKACKRNIIVPLGTGSGKTFIAVLLIKEYTTKLVTPWKNGGKRAFFLVDKVS 75

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDT----KQVLVMTAQILLNILR 418
           LV QQA  I   T   VG   G + QD W       +FDT     +V V+TAQI L++L 
Sbjct: 76  LVEQQAAHIEHHTTLNVGKMHGHLNQDIWSEPA---KFDTFIALHEVTVLTAQIFLDLLD 132

Query: 419 HSIIKMEAINLLILDECHHAV-KKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
           H    M    ++I DECHH +  KHPY L+M  +   T  + RP + G+TAS ++ K   
Sbjct: 133 HGFFNMSNAAVIIFDECHHVLGSKHPYRLIMHRYGQLTEVD-RPRILGLTASLISSKIPP 191

Query: 478 SQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQME 537
           S ++  ++   LE  + S + T  D   + K+   P E V+        +    ++ +  
Sbjct: 192 SNLEHLLE--KLERIMHSSIETASDLVCISKYGAKPREYVI---MCHDFFCCTCEISKKV 246

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
           ++  E+ ++   +   +F    D   +   + V     RT+S                L 
Sbjct: 247 ISTLESLRTFCLKCT-EFHPEFDVDPR---KPVLEAVSRTKS---------------VLE 287

Query: 598 ELGQWCAYKVAQ 609
           +LG WCA+K+ Q
Sbjct: 288 QLGPWCAWKLCQ 299


>gi|391332351|ref|XP_003740599.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
          Length = 1610

 Score =  124 bits (311), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 13/187 (6%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ----------RQNKK 351
           E+AR YQ+++ + AK++NTI  L TG GKT I+VLL++ + +++             +  
Sbjct: 21  ERARSYQIELFKSAKERNTIVCLGTGTGKTYISVLLLKHLEHEVSGCWVDGEPATPGSGG 80

Query: 352 MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQ 411
             ++FL P VPLV QQ  V+       VG Y G M  D W  +RW  E     VLVMT  
Sbjct: 81  KRSIFLAPTVPLVEQQGAVLGRHLSVKVGIYVGAMQVDLWSRERWVNELKAHGVLVMTPA 140

Query: 412 ILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV 471
           IL N   H  I +  I+L+++DECH A     Y  +M + Y     + RP V G+T S +
Sbjct: 141 ILYNAACHGFIPLNKISLIVMDECHRATGDDNYVSIM-KLYKDLQPQDRPRVLGLTGSVI 199

Query: 472 N--LKGV 476
           N  L+GV
Sbjct: 200 NSALRGV 206



 Score =  114 bits (284), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 154/329 (46%), Gaps = 18/329 (5%)

Query: 687  EHVDVIIGAAVADGKVTPKVQSLIKILLKYQ-HTEDFRAIIFVERVVAALVLPKVFAELP 745
            E +   +G +     V PK+  L+++L  ++ +      I+FV+  V A VL +   EL 
Sbjct: 327  ERMKKFLGKSPPLLDVPPKMHRLLEVLAAFRTNPAGLCGIVFVKLRVIAYVLYQWLGELS 386

Query: 746  SLS---FVKSASLIGHN------NSQEMRTFQM-----QETIAKFRDGRVTLLVATSVAE 791
                  F++ A ++GHN      +++E   F+M     + TIA FRDG   LL+AT+V E
Sbjct: 387  KTDDWRFLRCAFIVGHNQAPMSTSNREFENFKMNSKAQRRTIAAFRDGVYNLLLATNVIE 446

Query: 792  EGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEE 851
            EG+D+  CN+V+RFD  +   +Y QS+GRAR   S Y+++ +         + ++    E
Sbjct: 447  EGMDVPACNLVVRFDAPRDARSYTQSKGRARARQSLYVVLCDENERLEVEDMIDSFQETE 506

Query: 852  TLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSD 911
             +     ++T  S   + S  +  D     +    +  A +S  SA+ ++ +YC  +  D
Sbjct: 507  RIVTTFCDQTRRSPDAEESETVLRDD--EFLEPFIAGEARISAKSAMSILCWYCQTIVHD 564

Query: 912  RYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKK 971
            +YS   PEF        G     +  L  P        + P+ +  + A+  + L  C+K
Sbjct: 565  QYSNSLPEFFTLDKNDEGFTMSLTMPLLCPVRESITNEDRPMPTRAK-AKAYLALEMCRK 623

Query: 972  LHEMGAFTDMLLPDKGSGEQQEKVDQNDE 1000
            LHE    T+ LLP K +  +      +DE
Sbjct: 624  LHEKRELTEHLLPRKLTTGRYSSAWMSDE 652



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 191/421 (45%), Gaps = 55/421 (13%)

Query: 1404 RAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
            R  L+G+++L+ V+   L  +    HE +L  +R   +S   L   A  + +   +   +
Sbjct: 1088 RYRLVGESFLQMVIGFSLHDQRRNLHEKELRSLRSYKISTRNLLVRAYERNITEILDNVK 1147

Query: 1464 F-APSRWAAPGV---------------LPVFDEDTKDGDSSLFDQE-----------KSV 1496
            F A   +  PG                L V+     + D SL  +E           K++
Sbjct: 1148 FIAKENFLPPGYRTLEKEEKLLDTTFRLAVYRSYGFEIDGSLCLRELRHATNLEEVVKAI 1207

Query: 1497 AEDKLGTDKNYNEYEDDDMEDGELEGDS--SSYRVLSSKTLADVVEALIGVYYVEGGKDA 1554
            AE  L  ++  +E     +E GEL        ++   ++  AD V+A+ G+   + G   
Sbjct: 1208 AE--LDPEELQHETLQTTLEAGELPSQVPVKKFQTYRARVAADAVKAITGLAVDKCGPSG 1265

Query: 1555 ANHLMKWIGIQ----VES----DPEEVGCPSRPACVPESVL--RSVDFHALEDALKIKFK 1604
            A  +M+W+G++    ++S    D   +   S      ++V+  R      +E  L+ +F+
Sbjct: 1266 ALRVMRWLGLEFGRSIDSPDFVDAFALNLDSLRVSDSDAVILNRLHQIETVESRLRYRFE 1325

Query: 1605 DRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAA 1663
             + L++EAITH S R  S      +L  +G  V+++LI+K +     ++    L +LRA+
Sbjct: 1326 HKALVLEAITHHSYRGDSLTQSNVQLCSIGAVVIEYLISKFIASLPLDVESYNLFELRAS 1385

Query: 1664 AVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD------ 1717
              +  N A +  K+ LH +L + + +L   IR+++  + +   +P   S  LGD      
Sbjct: 1386 ICSAVNHAHIVAKNGLHKNLLYTNQSLFTVIRNYIDCLDDYEPQP---SKSLGDWESDDT 1442

Query: 1718 --CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMV--TPETLPMHPVRELQE 1773
               + P  L +++ ++ GA+F+DSG++  +VW V+  L    +      +P+ P+REL  
Sbjct: 1443 DDDRVPLALAEMLMALVGAVFIDSGKNLEIVWSVYAELCGEQILRLANNIPISPIRELFA 1502

Query: 1774 R 1774
            R
Sbjct: 1503 R 1503


>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus ND90Pr]
          Length = 1435

 Score =  124 bits (311), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 189/447 (42%), Gaps = 107/447 (23%)

Query: 1342 CFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI---------NYPVPASKILEALT 1392
            C +  LP S    A   PSI  ++E+ ++A  L+  +         + P+    IL ALT
Sbjct: 904  CIVDDLPASYAVLASLFPSITHKLETYMVANALRTTVLQSVNIDISHLPI----ILLALT 959

Query: 1393 AASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALS 1452
             ++      Y+R E LGD  LK++ S  L   + +  EG LT  + ++VSN  L + AL+
Sbjct: 960  PSAVDGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALA 1019

Query: 1453 KGLQSYIQADRFAPSRWA---APGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            KGL  +I   RF  ++W       VL + +   K        QEKS              
Sbjct: 1020 KGLDEFILYKRFTGAKWKPRYVSQVLAITNPPAK--------QEKS-------------- 1057

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK-------WI 1562
                                  SK +ADV+E+LIG  YV GG   A   +K       W+
Sbjct: 1058 ----------------------SKLIADVIESLIGASYVVGGFSKAFACVKALLPLEDWM 1095

Query: 1563 GIQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
             I   +D      P +     +SV+  +    +E+ +   F ++ +L+EA+TH +     
Sbjct: 1096 PIPQANDTLYNAAPEQ-----DSVMGVI---PVENLVGHIFNNKAMLLEALTHPTFRGLN 1147

Query: 1623 VSC-YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV------ 1675
              C Y+R EF+GDAVLD++++K L+     LP  ++  +R A VN    A          
Sbjct: 1148 THCSYEREEFLGDAVLDYIVSKRLYSHRPELPHHKMHGIRTAMVNASFLAYSMFETTVEE 1207

Query: 1676 -------------KHKLHVHLRHGSSAL----------DRQIRDFVKEVLEELLKPGFNS 1712
                         +  L   LR  S  L            + R  + E L+   +  +++
Sbjct: 1208 IFTNKETLQPETHQRALWQFLRSTSHELVMSRNLAIRRHSEARIQITEALQHDARFPWHA 1267

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDS 1739
              L D   PK L DIVES+ GA+++DS
Sbjct: 1268 LSLTD--PPKFLSDIVESMIGALYIDS 1292



 Score =  103 bits (257), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 116/237 (48%), Gaps = 22/237 (9%)

Query: 300 PEE--QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           P+E    R YQ +++ ++ K N I  ++TG+GKT IA+   R+   +L+      L  FL
Sbjct: 18  PDEVFHLRGYQAEMIAESMKANIIVVMDTGSGKTHIAIERARA---ELETCKPDKLVWFL 74

Query: 358 VPKVPLVYQQAEVIREQT-GYVVGHY--CGEMGQDFWDAQR-WQREFDTKQVLVM-TAQI 412
            P V L  QQ EV +    GY  GH   CG    + W  QR W   F     +VM T QI
Sbjct: 75  APTVALCEQQYEVFQANLPGY--GHLLLCGR-DVELWTTQRAWNEVFQHNVRIVMSTHQI 131

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTAS 469
           LL+ L H  + ++ + LLI DE HH   KHP   +MS+FY     ++    P V G++AS
Sbjct: 132 LLDALTHGFMSLQKLALLIFDEAHHCTLKHPAHKIMSDFYMPRLSDRTFVLPRVLGLSAS 191

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAAS 525
           PV     + Q      +  +E  L + V T K  R EL + V  P  + V Y +  S
Sbjct: 192 PVMRAAANKQ-----GLETIERNLQATVRTPKLYRSELLRSVHRPELIQVNYTREPS 243



 Score = 75.5 bits (184), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 148/296 (50%), Gaps = 28/296 (9%)

Query: 705 KVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNSQ 762
           KV  LI I++    T  +F  ++FVE+ V    L ++ A  P + + ++  + +G + S 
Sbjct: 376 KVNVLIDIIVVEAATNLNFTGLVFVEQRVWVASLAEILASHPRTKTLLRIGTFVGTSQSS 435

Query: 763 EMRT-------FQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
           + ++        + Q+T+   F+ G + L++ TSV EEG+D+  C++V+ F+  KT+  +
Sbjct: 436 QHKSSIFNYANLKNQQTVLDDFKAGIINLVLTTSVLEEGIDVPSCHLVVCFEAPKTLKGF 495

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK--EAIER-TDLSHLKDTSR 871
           +Q RGRAR+  S Y +++   ++  A    + ++ E  +RK  E  ER T LS  K+   
Sbjct: 496 VQRRGRARQQRSRYYILVP--DMGDAYTSASWQSLEAQMRKAYEDDERQTALSFEKE--- 550

Query: 872 LISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGP 931
              ++       ++E+TGA+++L++A+  ++ +C++L S  Y   RPEF     +     
Sbjct: 551 --YIEEYDSRCLRIETTGALLTLDNAMQHLYHFCARLSSGTYVDARPEF-----DFTNVN 603

Query: 932 TEYSCKLQLPCNAPFEKLEGP---VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            + S K  LP                 + R+AQ+     A K L+  G   + LLP
Sbjct: 604 GQISAKASLPICVDLTVRTANSSRTWKTERMAQKDAAFEAYKTLYIAGLVNENLLP 659



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 9/152 (5%)

Query: 1613 ITHASRPSS--GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENF 1670
            I  A  PS+  G   YQRLEF+GD +L  + + HL  ++  +P G LT  ++  V+N   
Sbjct: 954  ILLALTPSAVDGEENYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYL 1013

Query: 1671 ARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAPKVLGDIVES 1730
            AR A+   L   + +      +    +V +VL     P          K+ K++ D++ES
Sbjct: 1014 ARAALAKGLDEFILYKRFTGAKWKPRYVSQVLAITNPPAKQE------KSSKLIADVIES 1067

Query: 1731 IAGAIFLDSGRDTSVVW-QVFQPLLDPMVTPE 1761
            + GA ++  G   +    +   PL D M  P+
Sbjct: 1068 LIGASYVVGGFSKAFACVKALLPLEDWMPIPQ 1099


>gi|256077012|ref|XP_002574802.1| ribonuclease III [Schistosoma mansoni]
          Length = 907

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 167/409 (40%), Gaps = 88/409 (21%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ-KHEGQLTRMRQQMVSN 1443
            + ++E  T    ++    ER E  GD++L ++ +  ++   PQ   EG L+  R  +VSN
Sbjct: 530  NNLIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSN 589

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
              L   A       Y     F+P     P    V  E  K                    
Sbjct: 590  AHLCDIACDLKWYEYCTGQTFSPPEHFLPPCYSVASEACK-------------------- 629

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                               D   Y  L+ K+LAD+VEALIG + +  G  AA +L+ +  
Sbjct: 630  ------------------YDPRLYTRLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQ 671

Query: 1564 IQVESDPEEVGCPSRPACVPESVLR-SVDFHALEDALKIKFKDRGLLVEAITHASRPSSG 1622
            I                  PE +L  +  F  L++ L   FK   LL EA+TH S  +  
Sbjct: 672  I-----------------CPEIILELNQRFFQLQEKLGYYFKGIELLAEAMTHQSSINKQ 714

Query: 1623 V-SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
                YQRLEF+GD++L H+I+ +LF    N  PG LT  R+  V+N N A V V+H ++ 
Sbjct: 715  YWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIYP 774

Query: 1682 HLRHGSSALDRQIRDFVK------------EVLEELLKPGFNSFGLGDCKAPKVLGDIVE 1729
             +  G+ +L   I D               E++ + +  G N          KVL D+ E
Sbjct: 775  FIDFGNCSLKACIDDIKSIHRQTDSHFERIELITKKVSSGLNV---------KVLADVFE 825

Query: 1730 SIAGAIFLDSGRDTSVVWQVFQPLL---------DPMVTPETLPMHPVR 1769
            SI GAIF+DS  +  V   +    L         + +V P +LP   +R
Sbjct: 826  SILGAIFVDSNGNHQVASSIIHRFLGKTMNSVITNLLVQPVSLPYPDIR 874



 Score = 49.7 bits (117), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 41/226 (18%)

Query: 1350 SLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVPASKIL-EALTAASC---QETFCYERA 1405
            +L+   Q  P I+  +       QL++K+ Y     ++L EA+T  S    Q    Y+R 
Sbjct: 665  NLLHYFQICPEIILELNQRFF--QLQEKLGYYFKGIELLAEAMTHQSSINKQYWGNYQRL 722

Query: 1406 ELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFA 1465
            E LGD+ L  ++S +LF K P    G LT  R  +VSN+ L    +   +  +I      
Sbjct: 723  EFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIYPFIDF---- 778

Query: 1466 PSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSS 1525
                               G+ SL    K+  +D     K+ +   D   E  EL     
Sbjct: 779  -------------------GNCSL----KACIDDI----KSIHRQTDSHFERIELITKKV 811

Query: 1526 SYRVLSSKTLADVVEALIGVYYVEGGKD---AANHLMKWIGIQVES 1568
            S   L+ K LADV E+++G  +V+   +   A++ + +++G  + S
Sbjct: 812  S-SGLNVKVLADVFESILGAIFVDSNGNHQVASSIIHRFLGKTMNS 856


>gi|347440705|emb|CCD33626.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 984

 Score =  123 bits (308), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 242/609 (39%), Gaps = 119/609 (19%)

Query: 1294 KKQPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVR 1353
            ++QP+I    +S  +NLL       +E +G GE    K  ++ L P    + PLP ++V 
Sbjct: 406  EEQPVIEATYISLRRNLL-------DEFDG-GELETSKKCFIILEP--LKVSPLPTTVVA 455

Query: 1354 GAQRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF----- 1400
             A  LP+I+ RVES L+A++  D ++  +     LEA+T  S         Q  F     
Sbjct: 456  MAYLLPAIIHRVESYLIALEATDLLHLDIRPDLALEAVTKDSDNSGEHGEEQTNFQRGMG 515

Query: 1401 -CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
              YER E LGD +LK   S  L+   P   E +    R  ++ N  L+  AL   L  YI
Sbjct: 516  NNYERLEFLGDCFLKMGTSISLYGLNPDSDEFRYHVDRMCLICNKNLFNTALKLELYKYI 575

Query: 1460 QADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGE 1519
            ++  F    W   G                      +   K  T  N ++          
Sbjct: 576  RSAAFNRRAWYPEG--------------------PELLRGKTATAPNTHK---------- 605

Query: 1520 LEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRP 1579
                      L  K++ADV EA+IG   +      ++H  K +   V +  E V   +  
Sbjct: 606  ----------LGDKSVADVCEAMIGAALL------SHHESKSMDNAVRAVTEVVNSDNHN 649

Query: 1580 ACV----------PESVLRSVDFHALEDALKIK------FKDRGLLVEAITHASR--PSS 1621
            A V          P+    +     ++ A +++      FK   LL  A  H +      
Sbjct: 650  AVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLFIYE 709

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHV 1681
             + CYQRLEF+GD++LD      LF ++    P  LT+ + A V+N+    + VK   H 
Sbjct: 710  QIPCYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLGFHK 769

Query: 1682 HLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC-------------KAPKVLGDIV 1728
            HL    S + + I D+  ++ E L++   ++  +G               + PK L DIV
Sbjct: 770  HLLTLDSQVQKMIADYSSDINEALIQAKTDAKRVGKVEDDYARDYWIAVRQPPKCLPDIV 829

Query: 1729 ESIAGAIFLDSGRDTSVVWQVFQPLL-----DPMVTPETLPMHPVRELQERCQQQAEGLE 1783
            E+  GAIF+DS  D   V + F+  +     D  +       HP   L    Q+   G E
Sbjct: 830  EAFIGAIFVDSEYDYGEVEKFFEMHIRWYFEDMGIYDTYANKHPTTFLTNFLQKNM-GCE 888

Query: 1784 YKASRS---------GNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEKETAE 1834
              A  S          N+    V I    V  A     + A+  AARNAL  L   E   
Sbjct: 889  DWAPVSKEVPGEDGRKNVVVCGVIIHNKVVSTATAESMRYARVGAARNALRKL---EGMS 945

Query: 1835 AKEKGDENG 1843
             +E  DE G
Sbjct: 946  VREFRDEYG 954



 Score = 47.4 bits (111), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 66/326 (20%), Positives = 131/326 (40%), Gaps = 57/326 (17%)

Query: 882  VYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLP 941
            +Y V ++ A ++   ++ ++  +   LP    S+LR ++++   +K     ++ C+  LP
Sbjct: 55   IYPVPNSDAKLTYRMSLTVLSAFVDSLPRAPESVLRVDYVVTTVDK-----QFICEAILP 109

Query: 942  CNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEG 1001
              AP     G   ++ ++A+ +     C  LH+ G   D LL    + ++   + +N   
Sbjct: 110  EEAPIRGAIGRPATTKQVAKCSAAFETCVILHQKGYINDYLL---STFKRSAHMMRN--- 163

Query: 1002 EPLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNN--------G 1053
              L    + +E Y       L   W   G+ G     +F++ + ++K  +N        G
Sbjct: 164  ALLAVDGKKQEAYDMQTKPTL---WSSKGKQG-----IFYMTVLSLKSPDNLDRASQPLG 215

Query: 1054 ISKDPFLTQVSDFAVLF-------------SSELDAELASLKNFHVRLMSIVLDVDVEPY 1100
            +     L  + +F + F             +S +  E   L   ++  + +  DV  + Y
Sbjct: 216  LLTRSPLPDLPEFVLHFGAGRNSPTSCVPLASSITLEKNKLDQVNMFTLCLFQDVFSKAY 275

Query: 1101 TTPWDP-AKAYLFVP------VVSDKSVDPMNELDWDLVEKITKTD------AWTNPLQR 1147
             +  DP +  Y  VP      +V  KS +PM+ +DW+ VE +   +       W +    
Sbjct: 276  KS--DPDSMPYFLVPINCLNAIVDWKSQNPMSIIDWETVEYVQDFENKQADKPWEHKPWL 333

Query: 1148 ARPDVYLGTNERT--LGGDRREYGFG 1171
             +PD Y      T    G R+ +  G
Sbjct: 334  GKPDDYFKDKFITDPFDGSRKLWSVG 359


>gi|281207108|gb|EFA81291.1| RNA-directed RNA polymerase [Polysphondylium pallidum PN500]
          Length = 2852

 Score =  122 bits (307), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 228/533 (42%), Gaps = 80/533 (15%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICN------DLQRQNKKMLAVF 356
           + R YQ++ L +A KKNT+  + TG GKTL+A++LI+ +        + Q  N K + +F
Sbjct: 413 KPREYQIESLARAIKKNTLLVIPTGLGKTLVAIMLIQQMVAVNQWTPEQQAGNHKRMVLF 472

Query: 357 LVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            V   PLV QQ + I++    +         +       ++ +     ++V T   ++N+
Sbjct: 473 TVNTNPLVEQQEKAIKKHNSTLTVLKLNSENRLSDRKINFKVQSKRPDIIVATCDSIINL 532

Query: 417 LRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
                + +   + +I DE HHA   H Y+ VM+ +    +K   P + G++ASP      
Sbjct: 533 FNTRKLCISDFHTIIFDEVHHATGDHSYTKVMTHYKEMEAK-LYPRILGLSASP------ 585

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQ--LK 534
           SS  D  IKI     K++ V+ +   R  L      P  + +E ++     +  E+   K
Sbjct: 586 SSGED-RIKITGNIMKMEKVLASSVFRPNL------PPTINLESNQLVFTLTQEEKDCFK 638

Query: 535 QMEVAVEEAAQSSSRRSKWQFMGA-----RDAGAKEELRQVYGVSERTESDGAANLIQKL 589
            ++  + E  ++    S +   G           +  L+Q Y  +   +   +  L   L
Sbjct: 639 VVKEKINERLKTIMMESNYFLKGMELSDNNHPSFRSNLKQFYTWTVHNDLKVSNELGDIL 698

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
           R        + +W      + F                       ++ ++ L+ +L   A
Sbjct: 699 R--------IFEWLMVTGVEGF-----------------------NQFLNYLENDLASTA 727

Query: 650 VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSL 709
           + +  ++       F+E         EL +  V  GG+ V       V   +    V+ L
Sbjct: 728 IQEGRSR------DFIE---------ELHNLVVEKGGKRV-------VNSSRYQRVVEKL 765

Query: 710 IKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQM 769
            + L   +   +FR IIFV++   +  L  +  + P  S V +  ++GHN    M + + 
Sbjct: 766 TEKLDSEEKVINFRGIIFVKKRSTSRSLVHMLKKEPINSKVNAKIIVGHNGEDGMDSEKQ 825

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           +  + KFR+G+  LLVATSV EEG+D+  CN V+ FD    + + IQ RGRAR
Sbjct: 826 ERIMVKFREGQSKLLVATSVLEEGIDVNTCNFVLCFDDDLDMRSMIQRRGRAR 878


>gi|307638596|gb|ACY78116.2| RNA helicase LGP2 [Ctenopharyngodon idella]
          Length = 680

 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 267/603 (44%), Gaps = 101/603 (16%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ +V++ A K +N+I +L TG GKT  AV + +     L+      +AV LV KV L
Sbjct: 6   RSYQEEVVQAALKGENSIIWLPTGGGKTRAAVYVAKK---HLETTRNAKVAV-LVNKVHL 61

Query: 364 VYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS-- 420
           V Q      E   Y+   Y    +  D  D   + R      +++ TAQIL N L  S  
Sbjct: 62  VDQHFN--NEFNPYLGKAYRVKAISGDSSDKDLFGRLVKDSDLIICTAQILENALNSSEE 119

Query: 421 --IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVN--LK 474
              +++   +LLI+DECHH  K+  Y+ +M  +     +++R  P V G+TASP     K
Sbjct: 120 EKHVELTDFSLLIIDECHHTQKESVYNKIMGRYVEKKVRKERKLPQVLGLTASPGTGGNK 179

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMPSEVVVEYD--KAASLWSLHE 531
            ++  V+  ++IC   + LDSV+ + K+   +L++ VP P +   +YD  +  +L    +
Sbjct: 180 TLAKAVEHVLQIC---ANLDSVIVSTKNYASKLKEVVPRPRK---QYDIVEKRALDPFGD 233

Query: 532 QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            LK M   + E   S+  RS  + +G +D  A     +  GV E                
Sbjct: 234 HLKLMMSLIHEFMPSTVSRSLRE-VGTQDYEADVVELEKTGVKEE--------------- 277

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
                  L   CA  + Q     L +D        V+  +++           +++   +
Sbjct: 278 -----NRLITQCALHLRQYNDALLIHD-------TVRMVDAF----------NVLDEFYN 315

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKV-TPKVQSLI 710
            +  K++D  + F++G         L D + V         +     D +   PK+  L 
Sbjct: 316 SRSNKLLDGTDFFLQG---------LFDENRVE--------LKQLALDARYENPKLAQLQ 358

Query: 711 KILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK-SASLIGHNNS--QEMRT 766
           + LLK ++  +  R IIF +       L         L  VK SA ++    +    M  
Sbjct: 359 RTLLKEFKENKMSRGIIFSKTRRGTHCLYDWVNANHELQKVKISAGILTGTGTGVNHMNQ 418

Query: 767 FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            + + TI  FR G + LL++TSVAEEGLDI +CN+V+R+ L    +A  Q+ GRAR   S
Sbjct: 419 NKQKNTIKDFRLGHLNLLISTSVAEEGLDIAECNLVVRYGLLTNEIAQQQASGRARALNS 478

Query: 827 DYILMIERGNLSHATFLRNARNSE--ETLRKEAIE----------RTDLSHLKDTSRLIS 874
            Y ++ E G       LR    +E  E+L   AI+          R  ++ L+ T+ LI 
Sbjct: 479 VYSVVAEEGGRE----LRREFTNEYLESLTSNAIDQVQSMSPREFRIKITELQQTAVLIR 534

Query: 875 VDA 877
           ++A
Sbjct: 535 IEA 537


>gi|345288243|gb|AEN80613.1| AT1G01040-like protein, partial [Capsella rubella]
 gi|345288245|gb|AEN80614.1| AT1G01040-like protein, partial [Capsella rubella]
 gi|345288247|gb|AEN80615.1| AT1G01040-like protein, partial [Capsella rubella]
          Length = 206

 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/267 (39%), Positives = 131/267 (49%), Gaps = 72/267 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E ST  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVSTTPQLIPGEVAFSVKDNGVQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDD-IGRRDRDPMRRREHYNGS 231
            KRARV   ++E S  S RGQ  S DKDR   RKR R+ D+ +  + RD    R      
Sbjct: 73  RKRARVCSYQSERSNLSGRGQANSRDKDRFLNRKRTRNWDEAVHNKKRDCYNHR------ 126

Query: 232 SRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG- 290
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +   +EC  KVG 
Sbjct: 127 -------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESARTRECEEKVGE 179

Query: 291 ---KKSEAKEKMPEEQARPYQLDVLEQ 314
              K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 180 NKSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|254692316|emb|CAY86112.1| retinoic acid-inducible gene-I [Cyprinidae sp. EPC]
          Length = 940

 Score =  122 bits (307), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 242/556 (43%), Gaps = 82/556 (14%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSIC-NDLQRQNKKMLAVFLVP 359
           E + R YQ ++ + A+ +NTI    TG GKT++AV    +IC N L+++  +   VFL  
Sbjct: 253 ERKLREYQKELTDAAEGQNTIICAPTGCGKTIVAV----AICENHLKKRPGRAKIVFLAT 308

Query: 360 KVPLVYQQAEVIREQTGYV-----VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           KV +  QQ ++ +E   +      V   CG+M      A   +   +T  ++V+TAQIL+
Sbjct: 309 KVDVYEQQYKLFKEHFSFTDPNIKVTGMCGDM------ALSVRLLIETHDIVVLTAQILV 362

Query: 415 NILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           N L+   +  ++ ++L++LDECH+   KHPY+ +M+ +  T        +   T S   +
Sbjct: 363 NALQSGEVPSLDMLSLILLDECHNTTGKHPYNNIMTRYLDT-------KLSSSTHSLPQI 415

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
            G+++ V                + T KDR E E ++    ++    D    + ++ + L
Sbjct: 416 VGLTASVG---------------IGTFKDRTEAENNIL---QLCANLDTRV-IATVTKHL 456

Query: 534 KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTE--SDGAANL--IQKL 589
            ++   V    +        +F           +R +  +    E  +    N+  +  +
Sbjct: 457 DELRTFVHTPEK--------EFFDVPRHTCDPFIRIIENIMRNIEHLAKNTYNIESLSNI 508

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQN-DERANYQLDVKFQESYLSKVVSLLQCELVEG 648
           +   Y   +  QW         + A++N DE      D+     +L K    L   ++  
Sbjct: 509 QNCEYGSQKYEQWIVSVQKSCRVIAMKNTDEERRICRDLYNYTEHLRKYNDAL---IINE 565

Query: 649 AVSKKDAKVVDSENGFVE----GGTNEIEE--GELLDSHVVSGGEHVDVIIGAAVADGKV 702
               KD+  +D  +GF E     G +E E     L DS      +   ++  A   +G+ 
Sbjct: 566 DARTKDS--LDFLDGFFEQVRNAGFDETERRLTALYDS------QRPQLLFLAT--EGQQ 615

Query: 703 TPKVQSLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
            PK++ L  IL +  H  D  R ++FV     A  + K   +  SL F+    LIG    
Sbjct: 616 NPKLEELRFILEEEYHNNDQTRTVLFVRTRALADAMKKWIDDTDSLKFLMPGVLIGKGRK 675

Query: 762 QEMRTFQMQETIAK-----FRDG-RVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
                  M  T  K     F+   +  +L+ATSVA+EG+DI QCN+V+ ++    V+  +
Sbjct: 676 SNFNGSVMTPTNKKGVLDSFKSSDQSKILIATSVADEGIDIPQCNLVLMYEYVGNVVKMV 735

Query: 816 QSRGRARKPGSDYILM 831
           Q RGR R  GS   L+
Sbjct: 736 QVRGRGRAQGSRCFLI 751


>gi|380422390|ref|NP_001244086.1| probable ATP-dependent RNA helicase DHX58 [Danio rerio]
 gi|344313235|gb|AEN04477.1| probable ATP-dependent helicase LGP2 [Danio rerio]
          Length = 679

 Score =  122 bits (306), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 156/613 (25%), Positives = 264/613 (43%), Gaps = 95/613 (15%)

Query: 301 EEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP 359
           E + RPYQ +V++ A + +N+I +L TG GKT  AV +       L+ +    +AV LV 
Sbjct: 2   ELRLRPYQEEVVQAALRGENSIIWLPTGGGKTRAAVYVAEK---HLETKANAKVAV-LVN 57

Query: 360 KVPLVYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           KV LV Q    ++E   Y+   Y    +  D  +   + R      +++ TAQIL N L 
Sbjct: 58  KVHLVDQH--YMKEFGHYLRHKYRIKAISGDSSEKDFFGRLVRVSDLVICTAQILENALN 115

Query: 419 H----SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYH-TTSKEKR-PSVFGMTASPVN 472
           +      +++    LL++DECHH  K+  Y+ +M  +      KE R P + G+TASP  
Sbjct: 116 NMDEDKHVEITDFTLLVIDECHHTNKESVYNKIMWRYVEKKVRKEGRLPQILGLTASPGT 175

Query: 473 --LKGVSSQVDCAIKIC-NLESKLDSVVCTIKDRKELEKHVPMPS---EVVVEYDKAASL 526
              K +   V+  ++IC NL+SK   +V T      L+  VP P    ++V   DK    
Sbjct: 176 GGNKSLDKAVEHVLQICANLDSK---IVSTKNYTPMLQNFVPKPKKEYDIVERRDKDP-- 230

Query: 527 WSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLI 586
               + LK M + + E    +  R      G R+ G +E                 A+++
Sbjct: 231 --FGDHLKSMMLMIHEFMPPTVSR------GLRELGTQEY---------------EADVV 267

Query: 587 QKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV 646
           +  +A       L   CA  + +     L ND        ++  +++           ++
Sbjct: 268 ELEKAGVKVNNRLIAQCALHLRKYNDALLIND-------TIRMVDAF----------RVL 310

Query: 647 EGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKV 706
           E   + + +K++D  + F++G     +E  L   H+ S   + +             PK+
Sbjct: 311 EEFYNSRSSKLLDGTDIFLQGL---FDENSLELKHLASDARYEN-------------PKL 354

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLP---KVFAELPSLSFVKSASLIGHNNSQE 763
             L   LL+     + R IIF +       L    K   EL  ++          N +  
Sbjct: 355 AQLQSRLLEEFQDTNSRGIIFSKTRRGTHCLNDWVKTNRELQRVNITAGILTGAGNGANN 414

Query: 764 MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
           M   + +  I+ FR G + LL++TSVAEEGLDI +CN+V+R+ L    +A  Q+ GRAR 
Sbjct: 415 MTQTEQKSVISHFRQGYLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARA 474

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVY 883
             S Y ++ + G           R   + L  E +E      + +  R+  VD     V+
Sbjct: 475 SNSVYSVVADVG----------GREVRKELVNEYLEDLTARAIDEVQRMSPVD-FRHKVF 523

Query: 884 QVESTGAVVSLNS 896
           +++ T  V+ + +
Sbjct: 524 ELQKTAVVIRMEA 536


>gi|301106827|ref|XP_002902496.1| dicer-like, putative [Phytophthora infestans T30-4]
 gi|262098370|gb|EEY56422.1| dicer-like, putative [Phytophthora infestans T30-4]
          Length = 717

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 7/173 (4%)

Query: 299 MPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           M E + R +Q +VLE A++KN +   +TG GKT +A+ L+       Q  +    A F+ 
Sbjct: 1   MEEVELRAFQREVLELAREKNVVMVGDTGIGKTFLAIALLSE-----QDYSGDKRAFFMA 55

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P   LV Q    IR+ +   V  YCG    D WDA +W+RE    +V V T +I+ N+L 
Sbjct: 56  PTRQLVVQITAKIRQTSTLRVNSYCGRTA-DLWDATQWERELQLTRVFVCTPEIVRNVLL 114

Query: 419 HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV 471
              + +  +NLL+ DECHH  K+HPY+ V+  F    S    P +FG TA P 
Sbjct: 115 KGYVSLSRMNLLVFDECHHVTKRHPYAQVIKMFNQENSA-CMPRIFGTTACPT 166



 Score = 97.1 bits (240), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 5/235 (2%)

Query: 753 ASLIGHNNSQEMRTFQ---MQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK 809
           AS++G  +  +   FQ   M+ T+ KF  G + +LV+T+V+ EG+D  QC ++I  D   
Sbjct: 456 ASILGRASRSDTAAFQLDKMETTLKKFESGSIRVLVSTAVSVEGVDFPQCGLIIVMDRVG 515

Query: 810 TVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDT 869
           T    +Q +GRAR        + E G+L H  + +      E + +    R  +  ++  
Sbjct: 516 TARKLMQLKGRARHEDGVVYYLAEEGDLGHEVYYKQLTREVEVIDQLEFSREKVETIQQQ 575

Query: 870 SRLISVDAVPGTVY--QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEK 927
            R I+ + +   V+  ++ESTGAV+ L+S++  I+ +C  LP+  +++           +
Sbjct: 576 PRSIAAEMMGAGVHKIEIESTGAVLDLDSSITCINQFCQSLPTRLFTVDAKRLYTITEAR 635

Query: 928 PGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
            GG + ++ +L LP     E        S   A+ +   +AC+KL E     D L
Sbjct: 636 YGGKSMFTAELNLPMELELETFRSDPMPSKASARASAAFSACQKLLEQQLIDDSL 690


>gi|259489686|tpe|CBF90161.1| TPA: RNA helicase/RNAse III, putative (AFU_orthologue;
           AFUA_5G11790) [Aspergillus nidulans FGSC A4]
          Length = 411

 Score =  122 bits (305), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 27/260 (10%)

Query: 352 MLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQ 411
           M+++FLV  V L Y+QA V+R      VG   G +G D W  Q W    +   V+V TA+
Sbjct: 41  MISIFLVDSVTLSYKQAGVLRNNLDMNVGRIFGALGFDLWSRQTWTEFLEKYMVVVCTAE 100

Query: 412 ILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV 471
           +L   L H+ I+ME INLL+ DE HH  K H  + ++ + Y  T++ KRP V GMTASPV
Sbjct: 101 VLYQCLLHAHIRMEQINLLVFDEAHHTKKDHVCARIIRDSYFPTAQSKRPRVLGMTASPV 160

Query: 472 NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDK-----AASL 526
           + KG     D A    NLE  LDS + T      + + V  P E    YD+        +
Sbjct: 161 DTKG-----DVAQAAMNLELYLDSKIATASQLSLVHQVVRRPKEEAWIYDRLEQSFGTEI 215

Query: 527 WSLHE----QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGA 582
           + L E     ++ +++    A Q+S    +W   G         L+ V+      + +G 
Sbjct: 216 YRLMEGRLGDIEDLKLVFRFAWQASFELGRWCSDGV--------LKYVFSAKMLPKLEGK 267

Query: 583 ANLIQKLR-----AINYALG 597
           +  + +LR     A +Y LG
Sbjct: 268 SKELSQLRDASEVASSYILG 287


>gi|167046026|gb|ABZ10544.1| dicer-like protein C [Placozoa sp. DMJ-2008]
          Length = 352

 Score =  122 bits (305), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 178/380 (46%), Gaps = 60/380 (15%)

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
            A  ++    E  E LGD++LK++++  LF+ +P+ HEGQLT    ++V N  L +   S 
Sbjct: 2    AEAEDDINLEGLEFLGDSFLKFIIAANLFISHPKYHEGQLTNELTKIVRNDNLLKLGKST 61

Query: 1454 GLQSYIQADRFAPSR---WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEY 1510
             +  YI    F   +   W  PG                          KL + K  N  
Sbjct: 62   PICEYIIGKPFNLLKNEGWIPPGY-------------------------KLLSSKVKNL- 95

Query: 1511 EDDDMEDGELEGDSS-SYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD 1569
              D+    +L+GD + +++  SSK++ADV++A++    +E  +  A + + W+    + D
Sbjct: 96   --DEKVTSDLDGDKAVTHQKFSSKSIADVMKAILAAILLEFDERHAKYFISWL----DKD 149

Query: 1570 PEEVGCPSRPACVPE----------SVLRSVDFHALEDALKIKFKDRGLLVEAITHAS-- 1617
             +     S  + +P+           +  + +   LE  +   F+++  ++ A+TH+S  
Sbjct: 150  IKFTINASAASLLPDDDDISSNEINEIYEANNLERLEKVIGYSFQNKLFMIRALTHSSYH 209

Query: 1618 RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKH 1677
              +  +   Q+LEF+GD +L ++I +H F S+ +  P +L D + A VNN+  A + +  
Sbjct: 210  HHNIAIESNQKLEFLGDTILQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLADIGIAI 269

Query: 1678 KLHVHLRHGSSALDRQIRDFVKEVLEELL-----------KPGFNSFGLGDCKAPKVLGD 1726
             +  ++   S  L R I  FVK +  + +           +  F +F   + K PK + D
Sbjct: 270  GVSKYIFQESPDLFRDINQFVKIITCDYMIDDEMNYNDRTEALFENF-TEEVKIPKPMSD 328

Query: 1727 IVESIAGAIFLDSGRDTSVV 1746
            +VE++ GAI++D+G   + V
Sbjct: 329  VVEALIGAIYIDTGESIAEV 348


>gi|389747383|gb|EIM88562.1| hypothetical protein STEHIDRAFT_155914 [Stereum hirsutum FP-91666
            SS1]
          Length = 1722

 Score =  121 bits (303), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 132/267 (49%), Gaps = 21/267 (7%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESV--- 1586
            L  KT+ADV EA++G  YV GG++AA    K + I V           +    P  V   
Sbjct: 1320 LGDKTVADVAEAIVGAAYVTGGREAALKASKALCIAVPRVDRWSDFGRKALAPPPDVTAR 1379

Query: 1587 LRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLF 1646
            LR+    A+E  L  KF+   LL +A+TH S     ++ Y+RLEF+GDA+LD ++ +H++
Sbjct: 1380 LRAGSIEAVEAILGHKFERPHLLAQALTHGSIQGYEITSYERLEFIGDAILDFMVIRHVY 1439

Query: 1647 FSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLE--- 1703
               T L PG +T L+ A V+N   A V +   L  +L   +  L   IR + +++ E   
Sbjct: 1440 DRDTKLSPGAMTLLKGAMVSNSALAAVCIWAGLDEYLMFEAPVLAHNIRAYAQKLREKQK 1499

Query: 1704 --------ELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVF----Q 1751
                    E   PG   + L + + PK L D+VESI GA ++        V +VF    +
Sbjct: 1500 EEYALAQQEGRSPG--QYWL-ETEPPKALSDVVESIIGATYISDNFSPVGVEKVFDKILK 1556

Query: 1752 PLLDPMVTPETLPMHPVRELQERCQQQ 1778
            P  D  +T +TL  HP + L E  Q Q
Sbjct: 1557 PFYDKHITLQTLSHHPTKILFELFQAQ 1583



 Score =  109 bits (273), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 116/237 (48%), Gaps = 18/237 (7%)

Query: 1247 KRFYVESIRYEMTAESS---FPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRG 1303
            +R +V  IR ++T  S     PR+EGY   +EY    ++ K   G  L    QPLI    
Sbjct: 967  RRHFVVRIRPDLTPMSKPVDSPREEGYDNFVEYCK--EHRKNFQG--LRNYDQPLIEVGR 1022

Query: 1304 VSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMR 1363
            V    N+L+P  + S            K    +L PELC    +  S  R A  LPSI R
Sbjct: 1023 VGVVMNVLNPVTKQSTPPT--------KPDVKYLIPELCCKFTIAASTFRTALLLPSITR 1074

Query: 1364 RVESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF 1422
            R+E +LL  +L     ++ +    +  A++A S    F YER ELLGDAYLK++ S +LF
Sbjct: 1075 RIEDLLLVKELNASFFDHSISEYHLHAAISAPSASVEFDYERLELLGDAYLKYLSSIYLF 1134

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAP--GVLPV 1477
            +  P +HEG L   R +++SN  L   A + GL  ++QA  F    W  P   VLP 
Sbjct: 1135 VTNPSQHEGALHSARLRIISNKALLHNADAAGLPPFVQAKTFVAKFWQPPYFEVLPT 1191



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 30/322 (9%)

Query: 702  VTPKVQSLIKILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
            V PK   L+ +L   +   D FR I+FV+R   ALV+  +   L  + +++  +L+GH N
Sbjct: 453  VMPKFLKLVHVLRSCRAYGDAFRGIVFVQRRAVALVMVDLLRTL-DMGYLRPHALVGHGN 511

Query: 761  SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
               +++    E +  F  G   LL+AT   E+ +D+ + ++V+R+DL ++ ++Y  SR R
Sbjct: 512  YGPLQS--ETEIVQAFGMGTYNLLIATKCGED-IDLPRASLVVRYDLFESQVSYGYSRAR 568

Query: 821  ARKPGSDYILMIERGNLSHATFLRN---------------ARNSEETLRKEAIERTDLSH 865
             R   S  + MI+RGN +H   L +               A   E  +    +  T   +
Sbjct: 569  TRGRESHLVHMIQRGNDTHRRMLTHLTQLSRPMHLWAEKVAAGPEGAVPPTILHETHDPY 628

Query: 866  LKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQ---LPSDRYSILRPEFIM 922
            L D+      +  P +  +  +T   + L  A  +I+   +    + +D     +P F  
Sbjct: 629  LSDSED----EDEPDSYIKDPTTSGRIRLQDATSVIYQVAASARGVTTDAVE-YQPLFGF 683

Query: 923  ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
            E            C + LP         G   SS   A++  C   C  L   G      
Sbjct: 684  EEVATNSAYPRVVCTVTLPEGPAIRTFRGGPSSSFSQARRTACFETCSGLFHAGLLDYHF 743

Query: 983  LPD--KGSGEQQEKVDQNDEGE 1002
             P   + S   + + D++D  E
Sbjct: 744  FPQPPRTSSPYRRRPDESDTLE 765



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 27/241 (11%)

Query: 310 DVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVP-----KVPLV 364
           D+L +AK  N IA L        +    +       +      +A+FLV        P V
Sbjct: 141 DILNEAKCGNVIALLRNYHDVLSLTRDHLEWALGYAKSSQTSRIALFLVEGESLETQPHV 200

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           Y  A  +   T   +  Y     +D   +  WQ    T  VLV++   LL +LR  I+ +
Sbjct: 201 Y--ARSLAASTNLRIESYSSSGDEDTQASNTWQDAL-TLDVLVLSPMHLLELLRTGIVDL 257

Query: 425 EAINLLILDECHHAVKK---HPYSLVMSEFYHTTSKEKRPSVFGMTAS--PVNLKGVS-S 478
             ++ + L +    +K    HP + VM+EFY    +  RP +        P + + +   
Sbjct: 258 AQLHTIYLRDAR-PIKDNDLHPMNRVMAEFYMPAEENLRPRIVACLPEHLPFDARMLKLE 316

Query: 479 QVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAA--SLWSLHEQLKQM 536
           Q+ C+ K+C +   +   +  + DR         P+E+VV Y++A+  S   L+ QL+ +
Sbjct: 317 QILCS-KVCGVSDDIREYILAMPDR---------PTELVVFYERASKYSYTLLYRQLRNI 366

Query: 537 E 537
           +
Sbjct: 367 D 367



 Score = 45.8 bits (107), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 35/167 (20%)

Query: 1387 ILEALTAASCQ--ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            + +ALT  S Q  E   YER E +GDA L ++V R ++ +  +   G +T ++  MVSN 
Sbjct: 1402 LAQALTHGSIQGYEITSYERLEFIGDAILDFMVIRHVYDRDTKLSPGAMTLLKGAMVSNS 1461

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
             L    +  GL  Y+  +             PV   + +     L +++K          
Sbjct: 1462 ALAAVCIWAGLDEYLMFE------------APVLAHNIRAYAQKLREKQK---------- 1499

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSS---KTLADVVEALIGVYYV 1548
                    ++    + EG S     L +   K L+DVVE++IG  Y+
Sbjct: 1500 --------EEYALAQQEGRSPGQYWLETEPPKALSDVVESIIGATYI 1538


>gi|345288239|gb|AEN80611.1| AT1G01040-like protein, partial [Capsella grandiflora]
          Length = 206

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 130/267 (48%), Gaps = 72/267 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E  T  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVXTTPQLIPGEVAFSVKDNGVQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDD-IGRRDRDPMRRREHYNGS 231
            KRARV   ++E S  S RGQ  S DKDR   RKR R+ D+ +  + RD    R      
Sbjct: 73  RKRARVCSYQSERSNLSGRGQXNSRDKDRFLNRKRTRNWDEAVHNKKRDCYNHR------ 126

Query: 232 SRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG- 290
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +   +EC  KVG 
Sbjct: 127 -------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESARTRECEEKVGE 179

Query: 291 ---KKSEAKEKMPEEQARPYQLDVLEQ 314
              K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 180 NKSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
 gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
            Full=Ribonuclease III-like protein 3; Short=RNase
            III-like protein 3; AltName: Full=Ribonuclease three-like
            protein 3
 gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
          Length = 957

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 10/174 (5%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  L   F ++ LL EAIT  S        + RLEF GD++L+   T ++  +Y NL 
Sbjct: 6    AVEKILNYSFVNKTLLKEAITQKS------PLFDRLEFFGDSILEVAFTNYICHTYPNLK 59

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
               L DLR A V+NE FAR+AV H LH  L   + +L +++++F + V +E        +
Sbjct: 60   VKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKE---DDPVPY 116

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHP 1767
            G G  KAPK+L D +ESIA  +F+D   D   +W++F+ LL+P+ TP+ L + P
Sbjct: 117  G-GLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQP 169



 Score = 90.9 bits (224), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 21/243 (8%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  L   F ++ LL E +TH + P      +Q L FVG++ L    TKHL+ +Y  L 
Sbjct: 417  AVEKILNYSFVNKTLLKELLTHNNSP-----LFQGLMFVGESALSLAFTKHLYLTYPMLE 471

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            P  L+ LR A   ++ +A VAVK  ++          ++   DF+     EL+    + +
Sbjct: 472  PKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFI-----ELMGKEDDPY 526

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM---HPVRE 1770
             +   KAPK+L +++  +AGA+++D   +   + ++F+ LL+P+ T + L M    P   
Sbjct: 527  RV--VKAPKILVNLLAGVAGAVYIDVKYNVQRLLEIFRVLLEPIYTLDDLRMQLKQPFLM 584

Query: 1771 LQERCQQQAEGLEYKASRSG----NLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAV 1826
            L     +  + ++++ S+ G    N+A  +VY+D + +      +   A+ LAA  A+  
Sbjct: 585  LFRLADKHGKQIDFRYSKDGGSRKNIA--QVYMDDMFIASGCAKRIDTAKLLAAEEAIQK 642

Query: 1827 LKE 1829
            L E
Sbjct: 643  LSE 645


>gi|406356427|gb|AFS34610.1| LGP2 [Ictalurus punctatus]
          Length = 677

 Score =  121 bits (303), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 154/550 (28%), Positives = 248/550 (45%), Gaps = 88/550 (16%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V++ A + +N+I +L TG GKT  AV + +     L+      +AV LV KV L
Sbjct: 6   RPYQQEVVQVALRGENSIIWLPTGGGKTRAAVYVAK---RHLETHPNGKVAV-LVNKVHL 61

Query: 364 VYQQAEV-IREQTGYVVGH--YCGEMGQ-DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q  +   R   G  V      G+  + DF+             +++ TAQIL N L +
Sbjct: 62  VDQHFQKEFRPHLGSSVKMVPISGDSNEKDFFGCV-----VRDSSLVICTAQILENALIN 116

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVN- 472
           +     +++    LLI+DECHH  K+  Y+ +M+ +     +  +  P + G+TASP   
Sbjct: 117 TEESKHVELTDFTLLIIDECHHTHKEGVYNKIMARYVRKKIERVKGLPQILGLTASPGTG 176

Query: 473 -LKGVSSQVDCAIKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEVVVEYDKA-ASLWS- 528
             K +   +   ++IC   + LDSV+ + K+ + EL++ VP P +    YD      W  
Sbjct: 177 GAKSLDGAITHVLEIC---ANLDSVIVSTKNYEAELKEAVPRPMK---NYDIVDERYWDP 230

Query: 529 LHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQK 588
             + LK M   + E      R+   + MG ++  A     +  GV E+        L   
Sbjct: 231 FGDHLKMMMKLIHEFMMLD-RKFTLREMGTQEYEADVVELEKKGVQEQNRLLARCAL--H 287

Query: 589 LRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEG 648
           LR  N AL                  L ND                 ++V  L+  L+E 
Sbjct: 288 LRKFNDAL------------------LIND---------------TVRMVDALR--LLEE 312

Query: 649 AVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
             + +   V+D  + F+ G  NE                 V+++  A+ A  +  PK++ 
Sbjct: 313 FYTTETRNVLDITDEFLTGLFNE---------------NKVELLQLASEASNE-NPKLER 356

Query: 709 LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL--SFVKSASLIGHNN-SQEMR 765
           L + L+     E+ R IIF +       L       P L  + +++A+L+G    +  M 
Sbjct: 357 LQRTLVDQFKDENSRGIIFAKTREITRCLYDWVRTNPELRRANIRAANLVGAGTGATHMT 416

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + ++TI  FR+G + LL++TSVAEEGLDI +CNVVIR+ L    +A  Q+ GRAR   
Sbjct: 417 QREQRDTIKTFREGELNLLISTSVAEEGLDIPECNVVIRYGLLTNEIAQQQASGRARAKN 476

Query: 826 SDYILMIERG 835
           S Y ++ + G
Sbjct: 477 SVYSVVAKAG 486


>gi|344313229|gb|AEN04474.1| probable ATP-dependent helicase LGP2 [Carassius auratus]
          Length = 680

 Score =  120 bits (302), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 164/603 (27%), Positives = 266/603 (44%), Gaps = 101/603 (16%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ +V++ A K +N+I +L TG GKT  AV + +     L+      +AV LV KV L
Sbjct: 6   RSYQEEVVQAALKGENSIIWLPTGGGKTRAAVYVAKK---HLETTRNAKVAV-LVNKVHL 61

Query: 364 VYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS-- 420
           V Q      E   Y+   Y    +  D  D   + R      +++ TAQIL N L  S  
Sbjct: 62  VDQHFN--NEFNPYLGKAYRVKAISGDSSDKDLFGRLVKDSDLIICTAQILENALNSSEE 119

Query: 421 --IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVN--LK 474
              +++   +LLI+DECHH  K+  Y+ +M  +     +++R  P V G+TASP     K
Sbjct: 120 EKHVELTDFSLLIIDECHHTQKESVYNKIMGRYVEKKVRKERKLPQVLGLTASPGTGGNK 179

Query: 475 GVSSQVDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMPSEVVVEYD--KAASLWSLHE 531
            ++  V+  ++IC   + LDSV+ + K+   +L++ VP P +   +YD  +  +L    +
Sbjct: 180 TLAKAVEHVLQIC---ANLDSVIVSTKNYASKLKEVVPRPRK---QYDIVEKRALDPFGD 233

Query: 532 QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            LK M   + E   S+  RS  + +G +D  A     +  GV E                
Sbjct: 234 HLKLMMSLIHEFMPSTVSRSLRE-VGTQDYEADVVELEKTGVKEE--------------- 277

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
                  L   CA  + Q     L +D        V+  +++           +++   +
Sbjct: 278 -----NRLITQCALHLRQYNDALLIHD-------TVRMVDAF----------NVLDEFYN 315

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKV-TPKVQSLI 710
            +  K++D  + F++G         L D + V         +     D +   PK+  L 
Sbjct: 316 SRSNKLLDGTDFFLQG---------LFDENRVE--------LKQLALDARYENPKLAQLQ 358

Query: 711 KILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVK-SASLIGHNNS--QEMRT 766
           + LLK ++  +  R IIF +       L         L  VK SA ++    +    M  
Sbjct: 359 RTLLKEFKENKMSRGIIFSKTRRGTHCLYDWVNANHELQKVKISAGILTGTGTGVNHMNQ 418

Query: 767 FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            + + TI  FR G + LL++TSVAEEGLDI +CN+V+R+ L    +A  Q+ GRAR   S
Sbjct: 419 NKQKNTIKDFRLGHLNLLISTSVAEEGLDIAECNLVVRYGLLTNEIAQQQASGRARALNS 478

Query: 827 DYILMIERGNLSHATFLRNARNSE--ETLRKEAIE----------RTDLSHLKDTSRLIS 874
            Y ++ E G       LR    +E  E+L   AI+          R  ++ L+  + LI 
Sbjct: 479 VYSVVAEEGGRE----LRREFTNEYLESLTSNAIDQVQSMSPREFRIKITELRQMAVLIR 534

Query: 875 VDA 877
           ++A
Sbjct: 535 IEA 537


>gi|345288231|gb|AEN80607.1| AT1G01040-like protein, partial [Capsella grandiflora]
 gi|345288233|gb|AEN80608.1| AT1G01040-like protein, partial [Capsella grandiflora]
          Length = 206

 Score =  120 bits (302), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/267 (39%), Positives = 130/267 (48%), Gaps = 72/267 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E  T  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVRTTPQLIPGEVAFSVKDNGVQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDD-IGRRDRDPMRRREHYNGS 231
            KRARV   ++E S  S RGQ  S DKDR   RKR R+ D+ +  + RD    R      
Sbjct: 73  RKRARVCSYQSERSNLSGRGQANSRDKDRFLNRKRTRNWDEAVHNKKRDCYNHR------ 126

Query: 232 SRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG- 290
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +   +EC  KVG 
Sbjct: 127 -------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESARTRECEEKVGE 179

Query: 291 ---KKSEAKEKMPEEQARPYQLDVLEQ 314
              K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 180 NKSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|296190081|ref|XP_002743043.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Callithrix
           jacchus]
          Length = 925

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 251/571 (43%), Gaps = 93/571 (16%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKTL+A+L    IC + L++  Q +K   VF  
Sbjct: 242 KPRSYQLELALPAKKGKNTIICAPTGCGKTLVALL----ICEHHLKKFPQGQKGKVVFFA 297

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQ  V     E+ GY V    G   ++    Q      +   ++++T QIL+N
Sbjct: 298 NQIPVYEQQKSVFSKYFERLGYRVTGISGATAENVPVKQI----VENNDIIILTPQILVN 353

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  I  +    L+I DECH+  K+HPY+++M  +       S    P V G+TAS V
Sbjct: 354 NLKNGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTAS-V 412

Query: 472 NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHE 531
            +    +  +    IC L + LD                            A+ + ++ +
Sbjct: 413 GVGDAKNTDEALDYICKLCASLD----------------------------ASVIATVQD 444

Query: 532 QLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRA 591
            LK++E  V +  Q   R+ + +          + +R+  G+++R   D   NL Q ++ 
Sbjct: 445 NLKELEQVVYKP-QKFFRKVESRISDKFKCIIAQLMRETEGLAKRICKD-LENLSQ-IQN 501

Query: 592 INYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
             +   +  QW    V ++ +          +Q+  K +ES + K + L    L      
Sbjct: 502 REFGTQKYEQWIV-TVQKACMV---------FQMPDKDEESRICKALFLYTSHL-----R 546

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGG-------------EHVDVIIGAAVA 698
           K +  ++ SE+  ++   + +++     S+V + G             E +  +   +  
Sbjct: 547 KYNDALIISEHARMKDALHYLKD---FFSNVRAAGFDETEQDLTQRFEEKLQELESISRD 603

Query: 699 DGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG 757
                PK++ L  IL + Y    +   I+FV+       L         LSF+K   L G
Sbjct: 604 PSNENPKLEDLCFILREEYHLNPETITILFVKTRALVDALKNWIEGNSKLSFLKPGILTG 663

Query: 758 HN--NSQEMRTFQMQETIA-KFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
            +  N     T   Q+ I   F+  G   +L+ATSVA+EG+DI QCN+VI ++    V+ 
Sbjct: 664 RSKTNQNTGMTLPAQKCILDSFKAHGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIK 723

Query: 814 YIQSRGRARKPGSDYILM------IERGNLS 838
            IQ+RGR R  GS   L+      IE+ N++
Sbjct: 724 MIQTRGRGRARGSKCFLLTSNAAVIEKENIN 754


>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
            Gv29-8]
          Length = 1373

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 212/533 (39%), Gaps = 103/533 (19%)

Query: 1296 QPLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGA 1355
            QP++    +   +N L   F   E          D T YV L P    + P+P  +V  A
Sbjct: 806  QPVVNAELLPIRRNFLDEFFVDDE---------CDGTCYVILEP--LRVSPIPVDVVSIA 854

Query: 1356 QRLPSIMRRVESMLLAIQLKDKINYPVPASKILEALTAASC--------QETF------C 1401
              LP ++ RV+S+L+A++     +  + +   LEA+T  S         Q  F       
Sbjct: 855  LVLPVVIYRVDSVLIALETCSLFDLAICSDLALEAVTKDSFNTEEHGEHQIDFQPGMGKN 914

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGD +LK   +  ++   P   E      R  M+ N  L+++A+ KG+ +YI+ 
Sbjct: 915  YERLEFLGDTFLKMATTISVYTIAPDADEFHYHVGRMMMLCNKNLFEHAVEKGMPAYIRT 974

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    W    +        K G ++                                 
Sbjct: 975  KAFDRRTWYPSNM------TLKRGKAA--------------------------------- 995

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPE---EVGCPSR 1578
              + +   LS K++ADV EALIG  Y+    +  +  +K +   V S+     E      
Sbjct: 996  -RTETKHCLSHKSIADVCEALIGAAYMTSTTENMDMAVKAVTAMVCSEHHTMLEYKDYFA 1054

Query: 1579 PACVPE------SVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQRLEF 1631
               VP+      S  + +    + +    +F+   L   A  H S    + +  YQ+LEF
Sbjct: 1055 TFQVPKWHGNHVSAAQRLTVDKVAEITGYRFQCAPLARSAFRHPSYVFETNIPDYQQLEF 1114

Query: 1632 VGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALD 1691
            +GD +LD  +   LF  +    P  LT+ + A V+N+    + VK  LH H+   +SAL 
Sbjct: 1115 LGDGLLDMAVVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSALL 1174

Query: 1692 RQIRDFVKEV--LEELLKP-------GFNSFGLGDCKA--------------PKVLGDIV 1728
              I  +  ++   EE+ +        G+ S G     A              PK L D+V
Sbjct: 1175 GDIGRYATQLEQAEEIARQKSQGGDLGYTSGGCFQAGAQPTPQDFWIEVPQPPKALADVV 1234

Query: 1729 ESIAGAIFLDSGRDTSVVWQVF----QPLLDPMVTPETLPM-HPVRELQERCQ 1776
            E++ GA+F+DSG   SVV   F    QP  + M    +    HPV  L  R Q
Sbjct: 1235 EALVGAMFVDSGYSFSVVLNFFTKFIQPFFEDMALYSSFASNHPVTALAHRLQ 1287



 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 143/290 (49%), Gaps = 30/290 (10%)

Query: 703 TPKVQSLIKILLKYQHTEDF-------RAIIFVERVVAALVLPKVF----AELPSLSFVK 751
           +P++ S +K L  Y+  ED        R I+FVE    A +L  +F     E+P +   K
Sbjct: 269 SPELSSKVKTL--YEVLEDAFCKRQAKRCIVFVEARSTAFLLADLFQQPGMEIPGM---K 323

Query: 752 SASLIGHNNSQEMRTFQMQE----TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           +A +IG + S     +        ++ KFR G    L ATSVAEEG+DI +C+V+IRFDL
Sbjct: 324 AAYMIGSHTSTASAAYMSYRDQIMSLQKFRYGETNCLFATSVAEEGIDIPECDVIIRFDL 383

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
             + + YIQS+GRAR+  S Y+ M+E GNL H   LR A      LR+      +   + 
Sbjct: 384 YTSAIQYIQSKGRARQKSSLYVSMMEEGNLEHMRKLRRATRDAHALRQFCSALPEDRKVP 443

Query: 868 D----TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRP-EFIM 922
           D       L + + V    Y V  TGA ++  +++ ++  Y S  P++    L P E+I+
Sbjct: 444 DFVIGPDVLAAQEQVTQKRYTVAGTGAQLTFITSLEVLAKYASSFPNNAIDGLLPLEYIV 503

Query: 923 ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKL 972
               K     ++  ++ LP  +P +   G V  S +LA+ +    AC  L
Sbjct: 504 TSIGK-----KFVARVILPDASPIKMFPGEVQKSKQLARCSAAFEACVHL 548



 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 353 LAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
           +A FLV KV L +QQ  V+     + +G + GEM       + W R+F      V TAQI
Sbjct: 20  IAFFLVEKVALCFQQHAVLTTNLEFPIGKFFGEMTGVVRSQEYWDRQFAENMAFVCTAQI 79

Query: 413 LLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVN 472
           LL++L    I M  INL++ DE HHA K HPY+ ++ + Y   S+++RP + GMTASPV+
Sbjct: 80  LLDLLACGFISMGQINLMVFDEAHHAKKSHPYARIIKDHY-LRSRDERPRILGMTASPVD 138

Query: 473 LKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELE 507
               +   D       LES L S + TI D   ++
Sbjct: 139 ----ALTKDVRYAAAELESMLCSKIATISDEALMQ 169


>gi|189182361|gb|ACD81882.1| dicer-like nuclease 1 [Chlamydomonas reinhardtii]
          Length = 2236

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 150/320 (46%), Gaps = 37/320 (11%)

Query: 702 VTPKVQSLIKILLKY---QHTED-----------FRAIIFVERVVAALVLPKVFAELPSL 747
           VTP VQ +++ LL     +H  D           + A++F +R VA + L ++  ELP+ 
Sbjct: 665 VTPAVQWVVRSLLALSTQRHPADSGGDGVSVSSGWSAMVFCQRKVACVALHRLLTELPAA 724

Query: 748 --SFVKSASLIG-----HNNSQEMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQC 799
               ++ A  +G     H+ S      + QE + + F  G + +L++TSV  EGLD R C
Sbjct: 725 RGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRAFSSGALNVLISTSVGAEGLDFRTC 784

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILM---------IERGNLSHATFLRNARNSE 850
           N VI  D    V  ++Q  GRAR PGS Y+L          I + +   A  +  A    
Sbjct: 785 NAVIMVDPPDHVTPFVQCAGRARAPGSCYLLFARDDRQQQAIAKRSREEADMVAKALKLS 844

Query: 851 ETLRKEAIERTDLSHLKDTSRLISVDAVP----GTVYQVESTGAVVSLNSAVGLIHFYCS 906
               +EA +R       +      VD V       +++V  TGAV+    A  L+  YC 
Sbjct: 845 TAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQNLFRVPHTGAVMCGPLAQNLLESYCR 904

Query: 907 QLPSDRYSI-LRPEFIMERHEKP-GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAV 964
            LP +   + L+P +  + +E P      +   + +P N+P   +EGP+ S+   A+Q  
Sbjct: 905 TLPGNSGDVLLQPYYSYQEYESPLTRRKAFVATVHMPANSPLGVVEGPMQSNKGDARQHA 964

Query: 965 CLAACKKLHEMGAFTDMLLP 984
           C+A  ++L+E+GA  + LLP
Sbjct: 965 CMATVRRLYELGALDEHLLP 984



 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++L  A++  +T+ + ETG GKT IAV  I     +L    +  LA FL P VPL
Sbjct: 9   REYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVAAGR--LAAFLAPTVPL 66

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAEV+    G  V  Y GE  +D  +   WQR      VL  T   L  ++ H+ I 
Sbjct: 67  VRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFIT 125

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASP 470
           +  + +++ DECHH    HPY++++  F  H T  ++RP + G+TASP
Sbjct: 126 IPQLGMIVFDECHHTNANHPYAVLLRVFVRHLTPPDQRPVLLGLTASP 173



 Score = 50.4 bits (119), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 46/161 (28%)

Query: 1399 TFCYERAELLGDAYLKWVVSRFLF---LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
             F  ER E LGDA LK++ + +++      P  HEG ++  R Q+V+N  LY  AL  GL
Sbjct: 1590 AFDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGL 1649

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            Q +++A             LP             +D E+ +        +++N  E    
Sbjct: 1650 QHHMRA-------------LP-------------YDMERVL------RGRHWNTGE---- 1673

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
                   +++  + +  K LAD VEAL+G +   G   A +
Sbjct: 1674 -------EAARAQEVRGKRLADCVEALVGCHLAPGVPTAGS 1707



 Score = 44.3 bits (103), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            +APKVL D+VE+  GAI+LDSG D +V  Q F+ LL
Sbjct: 2074 RAPKVLADVVEAALGAIWLDSGGDLAVCEQAFRRLL 2109


>gi|169665428|gb|ACA63429.1| dicer-like 1 protein [Chlamydomonas reinhardtii]
          Length = 2243

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 150/320 (46%), Gaps = 37/320 (11%)

Query: 702 VTPKVQSLIKILLKY---QHTED-----------FRAIIFVERVVAALVLPKVFAELPSL 747
           VTP VQ +++ LL     +H  D           + A++F +R VA + L ++  ELP+ 
Sbjct: 665 VTPAVQWVVRSLLALSTQRHPADSGGDGVSVSSGWSAMVFCQRKVACVALHRLLTELPAA 724

Query: 748 --SFVKSASLIG-----HNNSQEMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQC 799
               ++ A  +G     H+ S      + QE + + F  G + +L++TSV  EGLD R C
Sbjct: 725 RGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRAFSSGALNVLISTSVGAEGLDFRTC 784

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILM---------IERGNLSHATFLRNARNSE 850
           N VI  D    V  ++Q  GRAR PGS Y+L          I + +   A  +  A    
Sbjct: 785 NAVIMVDPPDHVTPFVQCAGRARAPGSCYLLFARDDRQQQAIAKRSREEADMVAKALKLS 844

Query: 851 ETLRKEAIERTDLSHLKDTSRLISVDAVP----GTVYQVESTGAVVSLNSAVGLIHFYCS 906
               +EA +R       +      VD V       +++V  TGAV+    A  L+  YC 
Sbjct: 845 TAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQNLFRVPHTGAVMCGPLAQNLLESYCR 904

Query: 907 QLPSDRYSI-LRPEFIMERHEKP-GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAV 964
            LP +   + L+P +  + +E P      +   + +P N+P   +EGP+ S+   A+Q  
Sbjct: 905 TLPGNSGDVLLQPYYSYQEYESPLTRRKAFVATVHMPANSPLGVVEGPMQSNKGDARQHA 964

Query: 965 CLAACKKLHEMGAFTDMLLP 984
           C+A  ++L+E+GA  + LLP
Sbjct: 965 CMATVRRLYELGALDEHLLP 984



 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++L  A++  +T+ + ETG GKT IAV  I     +L    +  LA FL P VPL
Sbjct: 9   REYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVAAGR--LAAFLAPTVPL 66

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAEV+    G  V  Y GE  +D  +   WQR      VL  T   L  ++ H+ I 
Sbjct: 67  VRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFIT 125

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASP 470
           +  + +++ DECHH    HPY++++  F  H T  ++RP + G+TASP
Sbjct: 126 IPQLGMIVFDECHHTNANHPYAVLLRVFVRHLTPPDQRPVLLGLTASP 173



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 46/155 (29%)

Query: 1399 TFCYERAELLGDAYLKWVVSRFLF---LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
             F  ER E LGDA LK++ + +++      P  HEG ++  R Q+V+N  LY  AL  GL
Sbjct: 1590 AFDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGL 1649

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            Q +++A             LP             +D E+ +        +++N  E    
Sbjct: 1650 QHHMRA-------------LP-------------YDMERVL------RGRHWNTGE---- 1673

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
                   +++  + +  K LAD VEAL+G +   G
Sbjct: 1674 -------EAARAQEVRGKRLADCVEALVGCHLAPG 1701



 Score = 44.3 bits (103), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
            +APKVL D+VE+  GAI+LDSG D +V  Q F+ LL
Sbjct: 2074 RAPKVLADVVEAALGAIWLDSGGDLAVCEQAFRRLL 2109


>gi|345288237|gb|AEN80610.1| AT1G01040-like protein, partial [Capsella grandiflora]
          Length = 206

 Score =  119 bits (298), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 130/266 (48%), Gaps = 70/266 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E  T  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVRTTPQLIPGEVAFSVKDNGXQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSS 232
            KRARV   ++E S  S RGQ  S DKDR   RKR R+ D+         ++R+ YN   
Sbjct: 73  RKRARVCSYQSERSNLSGRGQANSRDKDRFLNRKRTRNWDEAV-----HNKKRDCYNHR- 126

Query: 233 RKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG-- 290
                 +D RDRE RGYWERD++GSN +V+R G+WEADH R   + +   +EC  KVG  
Sbjct: 127 ------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVXKESARTRECEEKVGEN 180

Query: 291 --KKSEAKEKMPEEQARPYQLDVLEQ 314
             K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 181 KSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|371496114|gb|AEX31636.1| Dicer 2 [Aedes albopictus]
          Length = 821

 Score =  119 bits (297), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 299 MPEEQ---ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKK--ML 353
           MP+E     R YQ  +     +KNTI +L TGAGKT IA++ I+ +  DL +   +    
Sbjct: 5   MPQEDDFVPRDYQRSMKLICMQKNTIIYLPTGAGKTHIALMAIKEMGRDLDKPLTEGGKR 64

Query: 354 AVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
             F+V  V L  QQAE +     Y    Y  +   D W   +W  EF   QV+V T QIL
Sbjct: 65  TFFVVNTVALAKQQAEFLSRNLTYDTSIYTSDRNVDTWKQDKWLDEFAKFQVVVCTCQIL 124

Query: 414 LNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNL 473
           L++L+H  + ++ INLLI DECHH V +HP   +M +F     K   P V G++   +  
Sbjct: 125 LDVLKHGYLSIKHINLLIFDECHHGVGEHPMHGIMEQFLR-VPKSDHPRVIGLSGMLL-Y 182

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDR---KELEKHVPMPSEVVVEYD 521
           K + +    + ++  LE+  +S + T+       E+ +    P E++V YD
Sbjct: 183 KQIKTVDQVSPELERLENTFNSTIATVGSYDAFTEVCRFSTNPKELLVSYD 233



 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 57/402 (14%)

Query: 705  KVQSLIKILLK-YQHTEDFRA--IIFVERVVAALVLPKV----FAELPSLSFVKSASLIG 757
            K++ LI  L K Y+   D +A  ++FV+R  +A VL  V    F++      +    ++G
Sbjct: 361  KIRQLINELEKMYERNRDKKAKTLVFVQRRFSAKVLYHVLKIYFSQTEDADLILPDFMVG 420

Query: 758  HNNSQEMRTFQM------QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTV 811
             N S      Q+      +  I +F+     ++V T+V EEG+D++ CN VI++D  +T 
Sbjct: 421  SNGSMPESIEQILSAKKDRRVIERFKRNETNVIVTTNVLEEGIDLQMCNTVIKYDHPQTF 480

Query: 812  LAYIQSRGRARKPGSDYILMIERGNLSHATFLRNAR---NSEETLRK----EAIERTDLS 864
             +Y QS+GRAR   S Y++M+   N     FL   R   + E+ L++    + I R D  
Sbjct: 481  ASYQQSKGRARMKDSQYMVML--NNEERQKFLEKYRLYKSIEQELQRCLIGKTINRPDPL 538

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMER 924
               D  + +  + +P       + GA +   SAV L++ YC  +P D ++        ER
Sbjct: 539  D-ADVHKELYNEIIPPF---FTAKGAKLDALSAVQLLNRYCMGMPRDAFT--NTNVTWER 592

Query: 925  HEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
             +   G  +   ++ LP  +   EK+ G    +++LA+++    AC+KL+E    ++ L+
Sbjct: 593  VDLKNG--QIVVEVMLPLQSTVREKILGNPMRNIKLAKRSAAFNACRKLYENKELSEHLI 650

Query: 984  PDKGSGEQ--------QEKVDQNDEGEPLPGTAR----HREFYPEGVADILQGEWILSGR 1031
            P     +         +   D +++   L GT +    H   YP+               
Sbjct: 651  PIDCRNQLNNLKDVYFRHWADFDEDSGKLAGTQKCIRTHAIEYPKQTT------------ 698

Query: 1032 DGCTGSKLFHLFMYTVKCVNNGISKDPFLTQVSDFAVLFSSE 1073
             GC        ++Y ++ +  G  +DP    V+ F  L++SE
Sbjct: 699  -GCFPEPGKPCYIYVLR-IGAGFEQDPSNENVNIFHSLYNSE 738


>gi|414879097|tpg|DAA56228.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
          Length = 290

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 19/200 (9%)

Query: 406 LVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFG 465
           +VMT Q+LL+ LR + + ++ ++L+I DECHHA   HPY+ +M EFYH +  E +P+VFG
Sbjct: 1   MVMTPQVLLDALRQAFLILDMVSLMIFDECHHATGNHPYTRIMKEFYHGS--EHKPNVFG 58

Query: 466 MTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAA 524
           MTASP+  KGVSS +DC  ++  LE+ LDS + ++ DR+E+E  VP   EV   Y+ +  
Sbjct: 59  MTASPIIRKGVSSDLDCKNQLSELENILDSKIHSVVDREEIELCVPSAKEVNRYYEPRTV 118

Query: 525 SLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN 584
           S   L E+L+ +    +        RS  Q+  A D   KE  ++               
Sbjct: 119 SFDDLSEELEILCSKYDGLIIQLHNRSTNQYKDA-DEITKESRKR--------------- 162

Query: 585 LIQKLRAINYALGELGQWCA 604
           L   L  I Y L + G  CA
Sbjct: 163 LSNSLAKICYCLEDAGLLCA 182


>gi|345288241|gb|AEN80612.1| AT1G01040-like protein, partial [Capsella grandiflora]
          Length = 206

 Score =  118 bits (296), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 129/267 (48%), Gaps = 72/267 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E  T  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVRTTPQLIPGEVAFSVKDNGVQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDD-IGRRDRDPMRRREHYNGS 231
            KRARV   ++E S  S RG   S DKDR   RKR R+ D+ +  + RD    R      
Sbjct: 73  RKRARVCSYQSERSNLSGRGXANSRDKDRFLNRKRTRNWDEAVHNKKRDCYNHR------ 126

Query: 232 SRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG- 290
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +   +EC  KVG 
Sbjct: 127 -------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESARTRECEEKVGE 179

Query: 291 ---KKSEAKEKMPEEQARPYQLDVLEQ 314
              K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 180 NKSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|297794785|ref|XP_002865277.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311112|gb|EFH41536.1| hypothetical protein ARALYDRAFT_917014 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 786

 Score =  117 bits (294), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 48/271 (17%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
             +E  L   FK++ LL EAIT + R       ++RLEF+GD+VL+  +  ++  +Y NL 
Sbjct: 6    TVEKILNYSFKNKTLLKEAITLSPR-------FKRLEFLGDSVLEVALANYIHHAYPNLK 58

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLR-HGSSALDRQIRDFVKEVLEELLKPGFNS 1712
               L DLR A VNNE FAR  VKH L+  +    SS+   +I++F + V +E +   +  
Sbjct: 59   LQELCDLRTANVNNEKFARATVKHNLYQFIIGEKSSSPSEKIKEFSEAVSKEDVPVPYG- 117

Query: 1713 FGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW------------------------- 1747
               G  +APKVLGDIVESIAGA+++D   D    W                         
Sbjct: 118  ---GLVEAPKVLGDIVESIAGAVYIDVDFDVQRFWEVCCVCLFFITFVFLISMLLIKREE 174

Query: 1748 --QVFQPLLDPMVTPETLPMH---PVRELQERCQQQAEGLEYKASRSG----NLATVEVY 1798
              Q+F+ LL+P+ T + L M    P   L     +  + ++++ S+      N+A  EVY
Sbjct: 175  FLQIFRGLLEPIYTLDDLQMQPKPPFLTLFRLADKHGKRIDFRYSKDDHSKENIA--EVY 232

Query: 1799 IDGVQVGVAQNPQKKMAQKLAARNALAVLKE 1829
            +DG+ +         +A+ LAA  A+  L E
Sbjct: 233  LDGIFIASGCTKSLSVAKVLAAEEAVQKLSE 263



 Score =  103 bits (258), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 143/309 (46%), Gaps = 23/309 (7%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  L   F ++ LL EA+   S      S +Q+L FVG A L   IT H++  Y N  
Sbjct: 474  AVEKILNYVFTNKNLLKEALRQTS------SLFQKLRFVGRAALVLAITNHIYLRYPNFE 527

Query: 1654 PGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSF 1713
            P  L  L+     N+  ARVAVKH +H     G    +++I  F K V +E       S 
Sbjct: 528  PRELELLQRGNTCNKTLARVAVKHNIH-QFFIGQFKSEKKIEAFSKVVGKE--DDPVPSD 584

Query: 1714 GLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM--HPVREL 1771
            G  + +   VL D+VES+AGA+++D   D   +W+ F+ L +P+ T + L +   P+  L
Sbjct: 585  GRSE-RTTNVLSDLVESVAGAVYIDMNFDIKRLWESFRGLFEPLYTLDDLRLRPQPIHTL 643

Query: 1772 QERCQQQAEGLEYKASRSG-NLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVLKEK 1830
                 +  +  +++    G N     VY+D   +   +    +   K++A    AV K  
Sbjct: 644  SCLGDKDGKHFDFRYEEKGSNRYKAHVYLDDKLIASGKKKNSRDDAKMSAAME-AVRKLS 702

Query: 1831 ETAEAKEKGDENGKKRKNGTQTFTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAV 1890
            E+   +   D     R++      +  L +IC +R WP P+Y     G    +K +  + 
Sbjct: 703  ESMPVEIVMD-----RQDIVNEDAKDKLIEICNKRKWPNPVYSVESNG---KSKGYVCSA 754

Query: 1891 RVNT-TDKG 1898
            ++ T T++G
Sbjct: 755  KIETPTEEG 763



 Score = 47.8 bits (112), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 41/74 (55%)

Query: 1853 FTRQTLNDICLRRNWPMPLYRCVREGGPAHAKRFTYAVRVNTTDKGWTDECVGEPMPSVK 1912
            + +  L+ IC++  WP P+YR   E GP + ++F  +V++   +   +    G+  P  K
Sbjct: 364  YPKGKLHKICVKNKWPFPIYRIEEERGPKNEQKFVCSVKIEIPNIEGSFHMKGDAKPKKK 423

Query: 1913 KAKDSAAVLLLELL 1926
            +A++S+A  ++  L
Sbjct: 424  EAENSSAYHMIRAL 437


>gi|325185212|emb|CCA19701.1| dicerlike putative [Albugo laibachii Nc14]
          Length = 760

 Score =  117 bits (293), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 100/194 (51%), Gaps = 14/194 (7%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           E+  R +Q  +L +A+  N +   +TG GKT +A++L+     D  R NK+  A F+ P 
Sbjct: 9   EDTLRSFQQHILSRARHNNVVMVGDTGIGKTYVAIVLLSQ--QDYSR-NKR--AFFMAPT 63

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
             LV Q    IR+ T   V  YC     D+WD  +W++E    +V V T Q++ N L   
Sbjct: 64  RQLVLQIESKIRQITTLPVRAYCSSEF-DYWDEYQWEQELGFHRVFVTTPQVVRNALEKG 122

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I M+ INLL+ DECHH  K+HPY+ +M  +      + +P +FG TA P          
Sbjct: 123 YISMKNINLLVFDECHHVSKRHPYAHIMKLYDPNAHPDDKPRIFGATACPTQ-------- 174

Query: 481 DCAIKICNLESKLD 494
           +CA  +C    K+D
Sbjct: 175 NCAEHLCAEIHKVD 188



 Score = 76.6 bits (187), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 13/244 (5%)

Query: 751 KSASLIGHNNSQEMRTF---QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDL 807
           K + ++G  +  +   F    M+  + +F+ G+  +LV+TSV+ EG+D   C +++  D 
Sbjct: 495 KFSCILGQMSKADSAAFALSDMKTILDRFQQGKTRMLVSTSVSVEGVDFPLCGLIVVMDP 554

Query: 808 AKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLK 867
             +    IQ RGRAR        + E G++      ++     E +     E      L 
Sbjct: 555 VTSPRMLIQLRGRARHNDGAIYYLGEEGDVMDEVNYKSLLVKAEQINAMNFESDKQETLH 614

Query: 868 DTSRLISVDAVPGTVY-------QVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPE- 919
           +  R  SV  +    +        ++STGA++ L+S+   +H +C  LP   + +  P+ 
Sbjct: 615 NQPRSKSVRDLQTCQFVADDCQVAIKSTGAIIDLDSSTSSLHQFCQSLPPLLFDV-NPQK 673

Query: 920 -FIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAF 978
            F +E          Y  K+ LP        E  +  S  LA+    L AC+ L+E G  
Sbjct: 674 LFTIESLTTAHNKQMYKAKVSLPNQLGVSACESGLMPSKSLAKAVAALRACRSLYEQGLL 733

Query: 979 TDML 982
            D L
Sbjct: 734 DDKL 737


>gi|345288235|gb|AEN80609.1| AT1G01040-like protein, partial [Capsella grandiflora]
          Length = 206

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 128/267 (47%), Gaps = 72/267 (26%)

Query: 59  FFGGIDHILDSIKNGSGLPN-----SNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKD 113
           FFGGIDHILDSIKNG GLPN     +N ++     E  T  +    E    + +NG  K+
Sbjct: 1   FFGGIDHILDSIKNGGGLPNHGVSETNSHI----KEVXTTPQLIPGEVAFSVKDNGXQKN 56

Query: 114 GVDRKRKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRF 173
                                  GG   D  +KE G                     D+ 
Sbjct: 57  -----------------------GGNKRDEVSKEEG---------------------DKD 72

Query: 174 SKRARVSVCKNE-SQYSSRGQYCSSDKDRVFGRKRLRDLDD-IGRRDRDPMRRREHYNGS 231
            KRARV   ++E S  S RG   S DKDR   RKR R+ D+ +  + RD    R      
Sbjct: 73  RKRARVCSYQSERSNLSGRGXANSRDKDRFLNRKRTRNWDEAVHNKKRDCYNHR------ 126

Query: 232 SRKDVRDKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKVG- 290
                  +D RDRE RGYWERD++GSN +V+R G+WEADH R   + +   +EC  KVG 
Sbjct: 127 -------RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVXKESARTRECEEKVGE 179

Query: 291 ---KKSEAKEKMPEEQARPYQLDVLEQ 314
              K  E KEK+ EEQAR YQLDVLEQ
Sbjct: 180 NKSKTEEPKEKVVEEQARRYQLDVLEQ 206


>gi|449299331|gb|EMC95345.1| hypothetical protein BAUCODRAFT_46072, partial [Baudoinia
            compniacensis UAMH 10762]
          Length = 1298

 Score =  116 bits (291), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 192/458 (41%), Gaps = 95/458 (20%)

Query: 1340 ELCFIHPLPGSLVRGAQRLPSIMRRVE-----------SMLLAIQLKDKINYPVPASKIL 1388
            E C +   P    R A  +PSIM +V+           S+L  +QLK+          I 
Sbjct: 858  EDCTVEKTPLRSARFAAFIPSIMHQVDVRLTVQEMQHSSVLQDLQLKN-------GDLIQ 910

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EA++A S  E   Y R E LGDA LK+ VS  + + +P   E  LT  + + VSN  L Q
Sbjct: 911  EAISAPSAAEKSDYNRLEYLGDALLKFWVSINVMVLHPTWPEKYLTMEKSRRVSNNTLAQ 970

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             A +  L  +I    F  ++W      P++  +    D   F Q K +            
Sbjct: 971  AAHNLQLNRWILTKSFTGTKWR-----PIYASEVLRTD---FSQPKQI------------ 1010

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
                                  SSKTLADVVEALIG  Y++GG   A   ++ +  Q  S
Sbjct: 1011 ----------------------SSKTLADVVEALIGAAYLDGGYQNAYTCIRSLLKQCWS 1048

Query: 1569 DPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP-SSGVSCYQ 1627
            +   + C S    + ++    V    L   +   F+   LL+EA+THAS P    +  Y+
Sbjct: 1049 E-HYLICSSLRGHMEQTAADQVS-SDLGRFIGHHFRFPYLLIEALTHASLPFQRRMMSYE 1106

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR--- 1684
            RLEF+GDAVLD +I  +L  +   L    + D+  A VN        +  K+    R   
Sbjct: 1107 RLEFLGDAVLDAIIVPYLCGNARKLKASEMHDIHEALVNEHFLGYCCLNAKIEQEYRTVE 1166

Query: 1685 -----HGSSALDRQIR--DFVK---EVL--EELLKPGFNSF------GLGD--------- 1717
                 H  S   R ++  DF++   ++L  +++    F+ +       L D         
Sbjct: 1167 KTGDGHDVSTATRTLKLADFIRAGGQLLKAKQVAMANFDRYQDAVATALADGEEYPWPDL 1226

Query: 1718 --CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
                 PK   D+VES+ GA+++D+  D SV  Q    L
Sbjct: 1227 IAMNLPKAFSDVVESVLGALYIDTDGDMSVCEQFVAKL 1264



 Score =  112 bits (279), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 114/226 (50%), Gaps = 15/226 (6%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LE +   N I  + TG+GKTL+A+  IR   ++L+      L  FL   V L 
Sbjct: 6   RAYQREMLEASLCGNRI-IMPTGSGKTLVAIARIR---HELETSTPTKLIWFLANSVELC 61

Query: 365 YQQAEVIR-EQTGYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
            Q  E ++   + Y +    GE G D W  QR W       +V++ T  +L + L H+ +
Sbjct: 62  RQHLETLKLHLSAYPILSLTGEAGVDAWSEQRLWDAVLSDVRVVIGTPAVLKDALSHAFV 121

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-PSVFGMTASPVNLKGVSSQVD 481
           +M  + LL+ DE HH +K HP + +M  FYH  +  K  P + G+TASP     +++Q  
Sbjct: 122 RMSRLALLVFDEAHHCIKNHPMNAIMQHFYHPGNSHKEVPHILGLTASP----AINAQYG 177

Query: 482 CAIKICNLESKLDSVVCTIKDRKE-LEKHVPMPSEVVVEYDKAASL 526
               +  LE+ LD+ V T K   E L + V  P   +V+Y   + L
Sbjct: 178 ---SLTQLEANLDAFVATPKRSIEDLMRFVYPPHITIVQYPPTSIL 220



 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 138/295 (46%), Gaps = 22/295 (7%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVER--VVAALV-----LPKVFAELPSLSFVKSAS 754
           V+PK   L+ +L  Y   E  RAI+FV+   VV ALV       ++       SFV +++
Sbjct: 347 VSPKADRLLSLLAAYASPE-VRAIVFVKERAVVTALVHLLRNAEQLRGHYSIGSFVGTST 405

Query: 755 LIGHNNSQEMR-TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
             G ++  ++    Q Q  +  FR G   L+VATSV EEG+D+  CN+VI FD   T +A
Sbjct: 406 FEGRSSLADLADPRQQQNDLLGFRRGDKNLIVATSVLEEGIDVSACNLVINFDQPDTFIA 465

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
           ++Q RGRAR+  S Y L++   +   +    +   +EE   K   E       +  +   
Sbjct: 466 FLQRRGRARQENSRYFLLVSEDDTRASA---SKWQAEEAKMKREYESARAE--RAAAEAE 520

Query: 874 SVDAVPGTVYQVESTGAVVSLNSA-VGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
            V A+    Y+VESTGA++++N A   L HF  + + ++ Y    P+F   R    G   
Sbjct: 521 DVQALNARSYRVESTGALLTINDAKAHLYHFCNTSVQANNYVDTEPDFYAVR----GKDN 576

Query: 933 EYSCKLQLPCNAPFEKLEGPV---CSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
            ++  + LP     +          SS   A +     A   LH+ G  TD LLP
Sbjct: 577 AWTASVTLPSYVHPDVRSAASRDRWSSEAGAIKDAAFEAYVALHKAGLLTDNLLP 631


>gi|449528774|ref|XP_004171378.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 453

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 218/513 (42%), Gaps = 97/513 (18%)

Query: 825  GSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQ 884
             SDYILM++ G+ +  + L+    S E +R E++    L  +   S            Y 
Sbjct: 3    NSDYILMVKSGDSTTLSRLQRYLASGEIMRNESLCHASLPCVPFRSDY------DEESYY 56

Query: 885  VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNA 944
            VESTGAVV+L+S+VGLI+FYCS+LPSD Y    P +  E           +C L LP ++
Sbjct: 57   VESTGAVVTLSSSVGLIYFYCSRLPSDCYFKPTPRWDKE-----------TCTLHLPKSS 105

Query: 945  PFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQ--QEKVDQNDEGE 1002
            P +          + ++Q+ CL ACK+LH  GA TD L+P   + E   QE     D+ +
Sbjct: 106  PLQTFSSK--DDAKYSKQSACLEACKQLHTCGALTDNLVPQIVAEESVAQEWNKPLDDEQ 163

Query: 1003 PLPGTARHREFYPEGVADILQGEWILSGRDGCTGSKLFHLFMYTVKCVNNGISKDPFLTQ 1062
            P+          P                     S ++H ++  +        K  F   
Sbjct: 164  PIYVPPEFVHCCPHN------------------SSVVYHCYLIEL--------KQNFHYD 197

Query: 1063 VSDFAVLFSSELDAELASLKNFHVRLMSIVLDVDVEPYTTPWDPAKAYLFVPVVSDKSVD 1122
            +S   ++ +   + E      F V+ M   LDVD       +D    Y+ +  +S + V 
Sbjct: 198  ISAHNIVLAMRTELE------FEVQSMCHDLDVD----RGSFDVNFKYVGIIKLSPEQVL 247

Query: 1123 PMNELDWDLVEKITKTDAWTNPLQRARPDVYLGTNERTLG-GDRREYGFGKLRHGMAFGQ 1181
               +    +  ++     WT+ L           NE  LG G R +Y             
Sbjct: 248  LSRQFQRTIF-RVLLNHTWTDKLSE--------NNEICLGDGPRVDYLLL---------- 288

Query: 1182 KSHPTYGIRGAIAQFDVVKASGLVPDREAMQIHNADMPTGKLMMADSCANAG-----DLE 1236
               P+ G  G +  +++V  S LV  RE   +H   + + K +  D    +G      L+
Sbjct: 289  ---PSTG--GELISWEIV-LSVLVSSREYC-VHRG-ISSSKDVSYDVPTKSGLVCICRLQ 340

Query: 1237 GRIVTAAHSGKRFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQ 1296
              +V   H+   + + S+  E+   S    ++      E  +Y +YYK ++G++L F+KQ
Sbjct: 341  NSVVYTPHNDHVYCITSVLSELNGNSLLKIRKN-----EMMAYKEYYKVRHGIDLRFEKQ 395

Query: 1297 PLIRGRGVSYCKNLLSPRFEHSEEQEGEGEEIL 1329
            PL+RG+ +    N +  RF   +EQ G+ E +L
Sbjct: 396  PLLRGKKIFPVHNYIK-RFRKHKEQ-GDVEVVL 426


>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
          Length = 1216

 Score =  116 bits (290), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 149/297 (50%), Gaps = 22/297 (7%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSA- 753
           ++PK+Q LI +LL  +  E F  I+FVE+      +  V +  P L       +FV ++ 
Sbjct: 86  LSPKMQYLIDLLLA-EWREGFTGIVFVEQRATVAAMDHVLSNHPQLRDLFNIGTFVGTSV 144

Query: 754 -----SLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
                S +G  +  E+R    Q+T+ +FRDG+  L+VATSV EEG+D+  C++VI F+  
Sbjct: 145 TVRRKSHLGIGDLVEVR--HQQQTLDEFRDGKKNLIVATSVLEEGIDVSNCHIVICFEPP 202

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
           K + ++IQ RGRARK  S +++M+   + S A       + EE ++K  +   DL  ++ 
Sbjct: 203 KNLKSFIQRRGRARKQDSKFVIMLSDDS-SLAQSPDKWLDLEEQMKKAYL--NDLRQIQA 259

Query: 869 TSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKP 928
                 ++     +Y+ ESTGA+++L +A+  ++ +C+ L   ++  LRP F     E  
Sbjct: 260 AEAREQIEEGGDAIYRCESTGALLTLENAMQHLYHFCAILGGGQHVDLRPRFSFMVDEN- 318

Query: 929 GGPTEYSCKLQLPCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
              T     L    NA   +  G     + R A++     A   LH+ G   D LLP
Sbjct: 319 -DLTTAVVTLPTSVNAKLRQHRGKGAWLTERAARRDAAFQAYVALHKAGLVNDNLLP 374



 Score =  102 bits (255), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 153/363 (42%), Gaps = 76/363 (20%)

Query: 1336 FLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLL-------AIQLKDKINYPVPASKIL 1388
             LP +   I   P S  + A  +PSI+ R E  ++       AI+  D  NY +    +L
Sbjct: 614  ILPAKDFVIDGSPASYAKFAAFIPSIIHRYELFMIVQELCNTAIKDVDFENYEM----VL 669

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
             A+TA+S  E   Y+R E LGD  LK+  +  L        E  LT  + ++VSN  L +
Sbjct: 670  RAITASSTNEN-DYQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEKKDRVVSNGSLAK 728

Query: 1449 YALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYN 1508
             +   GL  +I    F  ++W                                       
Sbjct: 729  ASRRAGLDRFIITRAFTGAKWRP------------------------------------- 751

Query: 1509 EYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES 1568
             Y +D +    +E      R LSSKTLADVVE+LIG  Y+EGG   AN  +  +  ++  
Sbjct: 752  RYVNDVLALAAIELPEK--RDLSSKTLADVVESLIGAAYIEGGMPKANLCIATLLPKLSW 809

Query: 1569 DP--EEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS---SGV 1623
             P  E     ++ A         +     E+ +   FK++ LL+EA+TH S  S   +  
Sbjct: 810  CPLDESRHILAKHAAEDHISAPPIHLERAEELIGYTFKNKYLLLEALTHPSFTSYRDATT 869

Query: 1624 SCYQRLEFVGDAVLDHLITKHLF--------------------FSYTNLPPGRLTDLRAA 1663
            S YQRLEF+GDAVLD+LI++ L                     ++   LP G +   RAA
Sbjct: 870  SSYQRLEFLGDAVLDYLISRRLHAYRKPLSADSTSQKNPPPRGYAPDELPHGSMHATRAA 929

Query: 1664 AVN 1666
             VN
Sbjct: 930  LVN 932



 Score = 42.0 bits (97), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 25/149 (16%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDL 1660
            + F++  +++ AIT +S   +  + YQRLEF+GD +L       L     + P   LT+ 
Sbjct: 660  VDFENYEMVLRAITASS---TNENDYQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEK 716

Query: 1661 RAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF--NSFGLGDC 1718
            +   V+N + A+ + +           + LDR I    +       +P +  +   L   
Sbjct: 717  KDRVVSNGSLAKASRR-----------AGLDRFI--ITRAFTGAKWRPRYVNDVLALAAI 763

Query: 1719 KAP-------KVLGDIVESIAGAIFLDSG 1740
            + P       K L D+VES+ GA +++ G
Sbjct: 764  ELPEKRDLSSKTLADVVESLIGAAYIEGG 792


>gi|145489315|ref|XP_001430660.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|74830695|emb|CAI39097.1| Dicer-like ribonuclease with mutated helicase and Rnase III domains
           [Paramecium tetraurelia]
 gi|124397759|emb|CAK63262.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1596

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 35/268 (13%)

Query: 282 NQEC-NGKVGKKSE---AKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLL 337
           NQE  N KV    E     + + E + R YQ+++ E+   KN+I +LETG GKTL+ ++L
Sbjct: 85  NQEILNNKVNLLEEDDTIVDTIEEFEFRDYQIELYEKGIGKNSIIYLETGLGKTLVIIML 144

Query: 338 IRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIRE--------------------QTGY 377
           +       +  +KK+  VFL   V LV QQA+ I++                    + G 
Sbjct: 145 MWDRL--FKYPDKKI--VFLANTVQLVEQQAQQIKQKLPRVAELISDDDSMIVKAKEIGS 200

Query: 378 VVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHH 437
            +    G    D W+   WQ   +  ++LVMT QI LNILR  ++K+   + + +DECH+
Sbjct: 201 KLNVLHGSKCTDIWNQIMWQIILEESKILVMTTQIFLNILRKGLVKISNFSFIAMDECHN 260

Query: 438 AVKKHPYSLVMSEFYHTTS----KEKRPSVFGMTASPV-NLKGVSSQVDCAIKICNLESK 492
           A++ HPY+ ++ EFY  T      +  P + G TASPV N K VS+      ++  L + 
Sbjct: 261 AIQDHPYNYILKEFYLKTKFQSDNQFLPQIVGATASPVMNSKSVSNNQLLQ-ELLQLSAN 319

Query: 493 LDSVVCTIKDRKELEKHVPMPSEVVVEY 520
           +DS    I D + L+KH+     V + Y
Sbjct: 320 MDSQYLHI-DAQNLKKHIKEAQIVPIYY 346



 Score = 81.6 bits (200), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDY-I 829
           + I KFR G++ +L++TSVAEEG+DI  CN VI F+   +  AY+Q +GRARK  S + I
Sbjct: 614 DIINKFRQGKIKILISTSVAEEGIDIPMCNYVIGFNPISSSKAYVQMKGRARKENSQFMI 673

Query: 830 LMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV---YQVE 886
            M+++   +     +  +N+ + + +E         L    + +       T    +++E
Sbjct: 674 FMVDKLQQAQVQSHQQVQNNIKQIIEELTAPQRQQMLNKAMQTLQSKTYENTYFDSFEIE 733

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEF-IMERHEKPGGPTEYSCKLQLPCNAP 945
            +GA+++ N +  LI   C +         +P++ I + H       ++   L LP +  
Sbjct: 734 GSGALINTNWSCQLIQQLCQKFNQKDADKTQPKYAIYQLHGNAQTNQQFIAFLLLPISMK 793

Query: 946 FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDML 982
                G +  S + A+ +    A  +L++ G   D L
Sbjct: 794 SFIFYGKLAPSSKDAKASAAFEASVQLYQKGYIDDNL 830


>gi|242076430|ref|XP_002448151.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
 gi|241939334|gb|EES12479.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
          Length = 194

 Score =  115 bits (289), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 16/153 (10%)

Query: 298 KMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           K P   AR YQLD+ ++A ++N + +L TG GKT IAVLL+  +   L R+  + + +FL
Sbjct: 21  KDPRRIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLMYEL-GHLIRKPSREVCIFL 79

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            P +PLV Q            V  Y G  G++  D Q W++E    +VLVMT QILL+ L
Sbjct: 80  APTIPLVRQ------------VQRYYGS-GKNSRDHQAWEKEIGEYEVLVMTPQILLHNL 126

Query: 418 RHSIIKMEAINLLILDECHH--AVKKHPYSLVM 448
           RH  IKM++I LLI DECHH  A K+HPY+ +M
Sbjct: 127 RHCFIKMDSIALLIFDECHHAQAQKRHPYAQIM 159


>gi|325185579|emb|CCA20062.1| Dicerlike 1 (DCL1) putative [Albugo laibachii Nc14]
          Length = 1609

 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 46/265 (17%)

Query: 1532 SKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSVD 1591
            SK +ADV+EA+ G Y +  G+  A + + W+GI V  D  E      P C P+++     
Sbjct: 1301 SKWIADVLEAICGAYIIGHGEKGARYFLNWVGIHVLDDSFEFSKRFYPDCYPKTLFPEAF 1360

Query: 1592 FHA-------------------LEDALKIKFKDRGLLVEAITHAS-----------RPSS 1621
             H                    LE  L  +F+++ LL+EAITH S           +  S
Sbjct: 1361 KHVGKWKFSILHHETLVKKMRLLEQRLCYRFRNKLLLLEAITHPSVRRLEIVMDNEKRVS 1420

Query: 1622 GVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVK-HKLH 1680
                Y+RLE++GDA++++L   + F ++    PG L++ +AA V+N+   + A+    + 
Sbjct: 1421 WQGNYERLEYLGDALIEYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAIACFGVD 1480

Query: 1681 VHLRHGSSALDRQIRDFVKEVLE--------ELLKPGF--NSFGLGDCKA-----PKVLG 1725
              +  G    DR+I + +K +          + ++PG   NS    +C       PK+L 
Sbjct: 1481 EAICLGHVQFDREIMNKIKTIPRKYAVDYNVDTIQPGHSRNSTTKSNCTTNLLALPKILA 1540

Query: 1726 DIVESIAGAIFLDSGRDTSVVWQVF 1750
            D++E++  A+FLDSG+D  ++  VF
Sbjct: 1541 DVMEALVAAVFLDSGKDLGIIRDVF 1565



 Score = 44.3 bits (103), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 19/152 (12%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            YER E LGDA ++++   + FL +     G L+  +   VSN  L + A+          
Sbjct: 1425 YERLEYLGDALIEYLTVSYAFLAHDTWLPGSLSNWKAATVSNDALGKTAI---------- 1474

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
                    A  GV           D  + ++ K++   K   D N +  +     +   +
Sbjct: 1475 --------ACFGVDEAICLGHVQFDREIMNKIKTIPR-KYAVDYNVDTIQPGHSRNSTTK 1525

Query: 1522 GDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
             + ++  +   K LADV+EAL+   +++ GKD
Sbjct: 1526 SNCTTNLLALPKILADVMEALVAAVFLDSGKD 1557



 Score = 42.4 bits (98), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 1402 YERAELLGDAYLKWVVSRFLF-LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            YER E+LGD +LK   S +++ ++     EG L+ +R+ ++ N  L Q++L K L  YI
Sbjct: 1213 YERCEVLGDTFLKLETSWYMYQMRRDIPDEGTLSMLRRDIIRNDRLCQFSLLKELHHYI 1271


>gi|320585938|gb|EFW98617.1| RNA helicase rnase [Grosmannia clavigera kw1407]
          Length = 2671

 Score =  115 bits (288), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 119/228 (52%), Gaps = 16/228 (7%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           +R YQL++ E++ KKN I  ++TG GKT +A+L IR+   +L+R   K++  FL   V L
Sbjct: 75  SRAYQLEMFEESLKKNIIVAMDTGTGKTRVAILRIRT---ELERSPLKIV-WFLATTVFL 130

Query: 364 VYQQAEVIREQT-GYVVGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSI 421
             QQ + I  Q  G       G+ G D W  Q  W       +++V T Q+LL+ + H  
Sbjct: 131 CDQQFKAIVSQIPGAQAKIITGQSGVDAWSTQAVWDAVLLNVRIVVATHQVLLDAMHHGF 190

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT--SKEKRPSVFGMTASPVNLKGVSSQ 479
           +K+ +I+LL  DE H  VK+H    +MSEFY+      E  P++ GMTASPV+     ++
Sbjct: 191 VKISSISLLAFDEAHACVKEHAGKRIMSEFYYPALNRGEVVPAILGMTASPVH----GTK 246

Query: 480 VDCAIKICNLESKLDSVVCTIK-DRKELEKHVPMPSEVVVEYDKAASL 526
           +D   K   LE  L +V  T K  R EL  H   PS      D  A L
Sbjct: 247 LDGLDK---LEQTLHAVCRTPKRHRAELVAHTKQPSTSAHVCDPRAGL 291



 Score =  105 bits (261), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 194/478 (40%), Gaps = 111/478 (23%)

Query: 1320 EQEGEGEEI------LDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQ 1373
            E++GEGEE         + +Y  LP   C +  +P + V+    +P +M+ +E  L+A +
Sbjct: 1001 ERDGEGEEQGGSKGESKRPFYTVLPAASCRVDRMPMAAVQFGALIPPLMQVLEVHLVAAE 1060

Query: 1374 LKDKINY---PVP-ASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKH 1429
            L         PV   S I  A++A + +    YE  E +GDA LK + +     +     
Sbjct: 1061 LLSSTRLRELPVSDRSLITTAISAPAARLHDNYEVLEFIGDAVLKLMAAANCAAQNLDAP 1120

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            EG L+  + ++V+N  L + A   GL  +I                              
Sbjct: 1121 EGHLSLFKDRLVANSRLCRAATEFGLDRFI------------------------------ 1150

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
                       +G+  +  E+ D  +E  E +G      V+S+KTLADVVEALIG   V+
Sbjct: 1151 -----------VGSQWSLREWRDVKIEAEEEKGGEQ--LVMSTKTLADVVEALIGAALVD 1197

Query: 1550 GGKDAANHLMK--------WIGIQVESDPEEVGCPSRPAC-VPESVLRSVDFHALEDALK 1600
            GG   A   M+        W+ ++          P +    +P +         LE+ L 
Sbjct: 1198 GGLTRALECMRILLPERQPWLSLEKTRATLFAAAPKQTTWRIPTT---------LEELLG 1248

Query: 1601 IKFKDRGLLVEAITHASRPSSGV---SCYQRLEFVGDAVLDHLITKHLFFS----YTNLP 1653
             +F+   LL EA+TH S P  G+    C +RLEF+GDAVLD++I + L         +L 
Sbjct: 1249 YQFRRPSLLAEAMTHPSTP--GIREGGCMERLEFIGDAVLDYVIVQRLLGGKGGKRLDLE 1306

Query: 1654 PGRLTDLRAAAVN----------------------NENFARVAVKHKLHVHLRHGSS--- 1688
              ++  LR   VN                      +    R  +   L   +RHG S   
Sbjct: 1307 HQKMHLLRTTVVNAAFLGFAAMEFSISSEASTVTADGTVTRGEIATPLWAFMRHGGSDEM 1366

Query: 1689 -----ALDRQIRDFVKEVLEELLKPG-FNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
                 A  ++     + VL  L +   +    L   +  K   DIVE++ GA+++D+G
Sbjct: 1367 ARMQKAAQKRHAALRESVLAALWEGSEYPWVQLAQLRLEKGFSDIVEAVIGAVWVDAG 1424



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 143/357 (40%), Gaps = 67/357 (18%)

Query: 702  VTPKVQSLIKILLKYQHTEDFR--AIIFVERVVAALVLPKVFAELPSL------------ 747
            ++ KV  L++IL   +  E  R   I+FV+    A VL +V +  P L            
Sbjct: 422  LSAKVLKLVEIL---EACEARRPTGIVFVKERPMAAVLARVLSLHPRLHGRFRAGHVVGM 478

Query: 748  ----SFVKSASLI--GHNNSQE-MRTFQMQETIAKFRDGR-----VTLLVATSVAEEGLD 795
                + V  A+L+      SQE ++ F+      +   GR     + LLVATSV EEG+D
Sbjct: 479  SQMYTDVYEAALVLNPRKGSQEALQLFRGGAEAGEAGRGRREGSGINLLVATSVMEEGID 538

Query: 796  IRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI-----ERGNLSH---ATFLRNAR 847
            +  CN+V+  D   ++ AYIQ RGRAR+  S   L++      R  L+H          R
Sbjct: 539  VPACNLVVCIDELTSLKAYIQRRGRAREENSQMHLLLGEDLRGRRALTHEWEELEHEMKR 598

Query: 848  NSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQ 907
              E+ LR    E  DL        L   + +P    +V ST A +    A   +  +C+ 
Sbjct: 599  RYEDGLR----ELADLDGQPRDDGLDDENIMP--PLEVASTQAKLGARDAKNHLDHFCAT 652

Query: 908  LPSDRYSILRPEFIMERHEKPG----------------GPTEYSCKLQLPCNAPFEKLEG 951
              S R+   +P +I+E +E  G                 P      +QLP   P      
Sbjct: 653  STSARFVDWQPVYILEEYEGDGEYDGDFNGIFTRGTFASPRLLRATVQLPITLPAHLRR- 711

Query: 952  PVCSSMRLAQQAVCLA-----ACKKLHEMGAFTDMLLPDKGSGEQQEKVDQNDEGEP 1003
              CS     Q+    A     A K L+  G   D LLP K + E      +  EG P
Sbjct: 712  -ACSKYAWRQEEDACADAAFQAYKALYAAGLIGDNLLPPKAT-EDDGLAGRTIEGRP 766


>gi|410108626|gb|AFP73448.2| retinoic acid inducible protein 1, partial [Anser anser]
          Length = 672

 Score =  115 bits (287), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 246/557 (44%), Gaps = 78/557 (14%)

Query: 326 TGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHY 382
           TG+GKT +A+L+      ++    +K   VFL  KVP+  QQ  V +   E+ GY +   
Sbjct: 7   TGSGKTFVALLVCEHHFQNMP-AGRKGKVVFLATKVPVYEQQKNVFKQHFERRGYSIQ-- 63

Query: 383 CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH-SIIKMEAINLLILDECHHAVKK 441
            G  G++F +    +   +   ++V+T QIL+N     ++  +    L+I DECH+    
Sbjct: 64  -GVSGENFSNVS-VENVIEDNDIIVLTPQILVNSFEDGTLTSLSVFTLMIFDECHNTTGN 121

Query: 442 HPYSLVMSEFYH---TTSKEKRPSVFGMTASPV--NLKGVSSQVDCAIKICNLESKLD-S 495
           HPY+++M+ +      +   +   + G+TAS    N K +   ++    IC+L S LD  
Sbjct: 122 HPYNVLMTRYLEQKFNSPASQLSQILGLTASVGVGNAKNIEETIE---HICSLCSYLDIQ 178

Query: 496 VVCTIKDR-KELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQ 554
            + T+++  ++L++ +  P     E D       +H            A   S   S+ +
Sbjct: 179 AISTVRENIQDLQRFMNKP-----EIDVRLVKRRVHNHF---------AVIISDLMSETE 224

Query: 555 FMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCAYKVAQSFLTA 614
            +          +R++Y V   +++             ++   +   W      +  L  
Sbjct: 225 AL----------MRKIYSVGTVSQNSRK----------DFGTQKYEHWIVVTQRKCRLLQ 264

Query: 615 LQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGAVSKKDAKVVDSENGFVEGGTNE 671
           L++ E          +ES + + + +    L    +  +  +DA ++D+ +   E  TN 
Sbjct: 265 LEDKE----------EESRICRALFICTEHLRKYNDALIISEDAPIIDALSYLTEFFTN- 313

Query: 672 IEEGEL--LDSHVVSGGEHVDVIIGAAVAD-GKVTPKVQSLIKILL-KYQHTEDFRAIIF 727
           ++ G    L+ H+ +  +  +  + A   D     PK++ L  IL   Y++    R ++F
Sbjct: 314 VKNGPYTELEQHLTAKFQEKEPELTALSKDETNENPKLEELACILDDAYRYNPQTRTLLF 373

Query: 728 VERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE---MRTFQMQETIAKFRDGRVT-L 783
            +       L K   E P LS++K   L+G     +   M     +  +  F+  + + L
Sbjct: 374 AKTRALVAALKKCMEENPILSYIKPDVLMGRGRRDQKTGMTLPSQKGVLDAFKTSKDSRL 433

Query: 784 LVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFL 843
           L+ATSVA+EG+DI QCN+V+ ++ +  V   IQ RGR R  GS  IL+  +  +      
Sbjct: 434 LIATSVADEGIDIAQCNLVVLYEYSGNVTKMIQVRGRGRAAGSKCILVTSKTEVVENE-- 491

Query: 844 RNARNSEETLRKEAIER 860
           +  R  EE + K AIE+
Sbjct: 492 KCNRYKEEAMNK-AIEK 507


>gi|358332040|dbj|GAA50766.1| dicer-like protein 1 [Clonorchis sinensis]
          Length = 774

 Score =  114 bits (286), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 181/421 (42%), Gaps = 82/421 (19%)

Query: 1372 IQLKDKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP-QKH 1429
            +  K   +YP+P  +++L+A T     ++   ER E +GD+ L+ + +  ++     Q  
Sbjct: 363  VATKLPTSYPIPGPTELLKATTLLGAADSVNLERLEFIGDSLLQLITTLQVYQNSSLQAD 422

Query: 1430 EGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSL 1489
            E QLT  R  +VSN  LY   + +    Y     F                D +D    L
Sbjct: 423  EQQLTNKRSVLVSNANLYSIVVREQWYRYCTTRPF----------------DIRD----L 462

Query: 1490 FDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVE 1549
            F       +         ++Y++ D        D   Y  L+ K+LAD++EAL+G +   
Sbjct: 463  FIPPCYTLK---------SQYQEPD--------DPRIYVKLTDKSLADMIEALLGCFLQC 505

Query: 1550 GGKDAANHLMKWIGIQV--------ESDPEEVGCPSRPACVPESVLRSVDFHA------- 1594
             G   A  L++  GI           S      C  + A    + L  +   +       
Sbjct: 506  IGIRGACGLLQRFGISFMDCINDTFNSSASMWRCFFQDAVCLTNQLSKLTIGSARGDEAT 565

Query: 1595 ----------LEDALKIKFKDRGLLVEAITHASRPS-SGVSCYQRLEFVGDAVLDHLITK 1643
                      L+  L   FK++ LL EA TH+S  S     CYQRLEF+GDAVL ++++ 
Sbjct: 566  KAELDAGISILQGRLGYVFKNQALLHEARTHSSYSSLKPTVCYQRLEFLGDAVLGYVVSN 625

Query: 1644 HLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV-- 1701
             LF  + +  PG LT+ R+  VNN   ARV V  KLH  +RH   +L   + D ++ V  
Sbjct: 626  DLFKRFPDYDPGMLTNHRSLIVNNLVLARVLVDLKLHDGIRHNIPSLPSMV-DKLRSVRL 684

Query: 1702 --------LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPL 1753
                    L E ++    +  +      K+LGD+ ES+ GA+F+D+  D  V+  +   L
Sbjct: 685  ADVTSLSELREKIQTNITASPM------KILGDVFESLIGAVFVDTNGDLQVIQTIVHRL 738

Query: 1754 L 1754
            L
Sbjct: 739  L 739


>gi|377643882|gb|ADC81089.2| retinoic acid-inducible protein I [Ctenopharyngodon idella]
          Length = 947

 Score =  114 bits (285), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 164/623 (26%), Positives = 273/623 (43%), Gaps = 107/623 (17%)

Query: 301 EEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNKKMLAVFLV 358
           E + R YQ ++   A + +NTI    TG GKT++A+    +IC   L++  ++   VFL 
Sbjct: 254 EIKLREYQKELTAAAVQGQNTIICAPTGCGKTIVAL----AICEYHLKQSPRRAKIVFLA 309

Query: 359 PKVPLVYQQAEVI-----REQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
            KV +  QQ ++      R      V   CG+M        +W  E     ++VMTAQIL
Sbjct: 310 TKVDVYEQQYKLFMKHFSRTDPSIRVMGMCGDMDLSV----QWLIE--NHDIVVMTAQIL 363

Query: 414 LNILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTAS 469
           +N L+   +  +E ++L++LDECH+   KHPY+ +M+ +  T   +S    P + G+TAS
Sbjct: 364 VNALQSGEVPSLELLSLILLDECHNTTGKHPYNNIMTRYLDTKLSSSTHSLPQIVGLTAS 423

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
            V +    ++++    I  L + LD+ V+ T+K +  EL+ +V  P +   E  K  +  
Sbjct: 424 -VGIGSFKNRLEAENNILQLCANLDTRVITTVKKQLDELKTYVHTPEKEFFEVSK-HTYD 481

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
                +K +   +E+ AQ +        +  R+ G+++  + +  V +      +  +IQ
Sbjct: 482 PFIRIIKNIMSNIEQLAQKAFNIESLSNIQNREYGSQKYEQWIVSVQK------SCRVIQ 535

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
            ++  N    E  + C               E  NY         +L K    L   ++ 
Sbjct: 536 -MKDTN----EERRICR--------------ELYNYT-------EHLRKYNDAL---IIN 566

Query: 648 GAVSKKDAKVVDSENGFVE----GGTNEIEE--GELLDS------HVVSGGEHVDVIIGA 695
                KDA  +D  +GF E     G +E E     L DS      H+ S G+        
Sbjct: 567 EDARTKDA--LDYLDGFFEQVRNAGYDETERKLTALYDSQRPQLLHLASEGQQ------- 617

Query: 696 AVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
                   PK++ L  IL  +YQ+ ++ R ++FV+    A  + K   +  SL F+K   
Sbjct: 618 -------NPKLEELKFILEEEYQNNDETRTVLFVKTRALADAMKKWIDDTDSLKFLKPGV 670

Query: 755 LIGHNNSQEMRTFQMQETIAK-----FRDG-----RVTLLVATSVAEEGLDIRQCNVVIR 804
           LIG           M  T  K     F+       +  +L+ATSVA+EG+DI QCN+V+ 
Sbjct: 671 LIGKGRKSNFTGSVMTLTSKKGVLDSFKSTDQNSDQSKILIATSVADEGIDIPQCNLVLM 730

Query: 805 FDLAKTVLAYIQSRGRARKPGSDYILMI--------ERGNLSHATFLRNARNSEETLRKE 856
           ++    V+  +Q RGR R  GS   L+         ER N+     +  A    ++   E
Sbjct: 731 YEYVGNVVKMVQVRGRGRAQGSRCFLISSSKECIEKERINMIKEKIVEEAIVQLQSHPAE 790

Query: 857 AIERTDLSHLKDTSRLISVDAVP 879
              + D+   +D +R   V A P
Sbjct: 791 LSNKVDVLQREDKARRDHVSASP 813


>gi|350646449|emb|CCD58848.1| ribonuclease III, putative [Schistosoma mansoni]
          Length = 928

 Score =  114 bits (285), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 173/424 (40%), Gaps = 92/424 (21%)

Query: 1385 SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQ-KHEGQLTRMRQQMVSN 1443
            + ++E  T    ++    ER E  GD++L ++ +  ++   PQ   EG L+  R  +VSN
Sbjct: 530  NNLIEPTTLLGARDAVDLERLEFYGDSFLHFIATLCVYGTNPQDADEGCLSSKRGSLVSN 589

Query: 1444 LVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGT 1503
              L   A       Y     F+P     P    V  E  K                    
Sbjct: 590  AHLCDIACDLKWYEYCTGQTFSPPEHFLPPCYSVASEACK-------------------- 629

Query: 1504 DKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIG 1563
                               D   Y  L+ K+LAD+VEALIG + +  G  AA +L+ +  
Sbjct: 630  ------------------YDPRLYTRLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQ 671

Query: 1564 I--------------QVES------DPE---EVGC------PSRPACVPESVLRSVD--F 1592
            I              +VE+       P+   E+ C        R   + + ++  ++  F
Sbjct: 672  ICPVSWSTLKNDKHYKVEAPWHFFLQPKLYSELNCGNALNASCRSLHISKEIILELNQRF 731

Query: 1593 HALEDALKIKFKDRGLLVEAITHASRPSSGV-SCYQRLEFVGDAVLDHLITKHLFFSYTN 1651
              L++ L   FK   LL EA+TH S  +      YQRLEF+GD++L H+I+ +LF    N
Sbjct: 732  FQLQEKLGYYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPN 791

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK------------ 1699
              PG LT  R+  V+N N A V V+H ++  +  G+ +L   I D               
Sbjct: 792  SSPGALTTARSTVVSNINLANVVVEHDIYPFIDFGNCSLKACIDDIKSIHRQTDSHFERI 851

Query: 1700 EVLEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVT 1759
            E++ + +  G N          KVL D+ ESI GAIF+DS  +  V   +    L   +T
Sbjct: 852  ELITKKVSSGLNV---------KVLADVFESILGAIFVDSNGNHQVASSIIHRFLGKTMT 902

Query: 1760 PETL 1763
             + L
Sbjct: 903  TQLL 906



 Score = 48.5 bits (114), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 39/199 (19%)

Query: 1372 IQLKDKINYPVPASKIL-EALTAASC---QETFCYERAELLGDAYLKWVVSRFLFLKYPQ 1427
             QL++K+ Y     ++L EA+T  S    Q    Y+R E LGD+ L  ++S +LF K P 
Sbjct: 732  FQLQEKLGYYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPN 791

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
               G LT  R  +VSN+ L    +   +  +I                         G+ 
Sbjct: 792  SSPGALTTARSTVVSNINLANVVVEHDIYPFIDF-----------------------GNC 828

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
            SL    K+  +D     K+ +   D   E  EL     S   L+ K LADV E+++G  +
Sbjct: 829  SL----KACIDDI----KSIHRQTDSHFERIELITKKVS-SGLNVKVLADVFESILGAIF 879

Query: 1548 VEGGKD---AANHLMKWIG 1563
            V+   +   A++ + +++G
Sbjct: 880  VDSNGNHQVASSIIHRFLG 898


>gi|296923414|emb|CAZ27718.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Oncorhynchus mykiss]
          Length = 677

 Score =  113 bits (283), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 246/551 (44%), Gaps = 93/551 (16%)

Query: 307 YQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLVY 365
           YQ +V+++A + +N I +L TG GKT  AV + +     L+      +AV LV KV LV 
Sbjct: 8   YQEEVVQRALRGENIIIWLPTGGGKTRAAVYVAKK---HLENNPGAKVAV-LVNKVHLVD 63

Query: 366 QQAEVIREQTGYVVGHYC-----GEMGQ-DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           Q      E   Y+   Y      G+  Q DF+  +   + FD   +++ TAQIL N L +
Sbjct: 64  QHYN--NEFNPYLGSDYSLVSISGDCDQKDFFGCE--VKNFD---LVICTAQILENALTN 116

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVN- 472
                 +++    LLI+DECHH  K+  Y+ +M+ +     K +R  P + G+TASP   
Sbjct: 117 QEEGKHVELSQFTLLIIDECHHTHKEGVYNKIMARYVAQKLKGERRLPQILGLTASPGTG 176

Query: 473 -LKGVSSQVDCAIKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEVVVEYDKAASLWSLH 530
             K +   V+  ++IC   + LDSV+ + K    EL+K VP P +     D+        
Sbjct: 177 GAKSIKGAVEHVLQIC---ANLDSVIVSSKVYAPELKKKVPRPRKRFDIVDRRPQ-DPFG 232

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
           + LK M   + +           +F G ++  A   + +  GV++R              
Sbjct: 233 DHLKFMMQFIHDFMALGPEFPVREF-GTQEYEADVVILEKKGVTDR-------------- 277

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
             N  L +    CA  + Q     L ND        V+  +++           ++E   
Sbjct: 278 --NRLLAQ----CALHLRQYNDALLIND-------TVRMVDAF----------RVLESYY 314

Query: 651 SKKDAKVVDSENGFVEG--GTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQS 708
           S K +  +D  + F+ G    NE+E  +L      SG    +             PK+  
Sbjct: 315 STKSSTAMDGTDFFLLGLYQENEVELRKL------SGDARFE------------NPKMGK 356

Query: 709 LIKILL-KYQHTEDFRAIIFVERVVAALVLPKVFAELPSL--SFVKSASLIGHNNS-QEM 764
           L   LL ++      R I+F +   +   L    +  P+L  + +++A L G  N    M
Sbjct: 357 LQNTLLEQFVQGGHSRGILFSKTRKSICCLYDWVSNNPALQRAGIRAAILTGAGNGINYM 416

Query: 765 RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKP 824
              + ++TI  FR G + LL++TSVAEEGLDI +CN+V+R+ L    +A  Q+ GRAR  
Sbjct: 417 TQNEQKDTIRNFRLGSLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAS 476

Query: 825 GSDYILMIERG 835
            S Y ++ + G
Sbjct: 477 DSVYSVVAQAG 487


>gi|339261112|ref|XP_003368069.1| conserved hypothetical protein [Trichinella spiralis]
 gi|316963063|gb|EFV48890.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 654

 Score =  113 bits (282), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 30/269 (11%)

Query: 746 SLSFVKSASLIGHNNSQEMR--TFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQCNVV 802
           S S+++   ++G   S E+   +F  QE + K FR G++ LL ATS+ EEG+D+R CN V
Sbjct: 138 SYSYLEVDYVVGSRMSAEVAEPSFARQEEVLKNFRHGKLNLLAATSILEEGIDVRHCNYV 197

Query: 803 IRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNL-SHATFLRNARNSEETLRKEAIERT 861
           IRFD   T  +++QS+GRAR+  + Y ++++   L S    L +   +E+ L+    +  
Sbjct: 198 IRFDTPLTFRSFVQSKGRARQKIAYYTILVQDRFLKSFQEMLNSFVETEKFLKVNGRDLN 257

Query: 862 DLSHLKDTSRLIS-------------------VDAV--PGTVYQVES----TGAVVSLNS 896
            L+  KD  R  S                   VD++  P   Y  E+      A + L+S
Sbjct: 258 ILTRTKDRDRSYSGNNDQVDNCRKEVNLPNGDVDSLVEPYYTYFEENGLVKKAACLVLSS 317

Query: 897 AVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPF-EKLEGPVCS 955
           A  +I  YC++L  DR++   P+F ++          Y   +QLP  +P  +K+EG    
Sbjct: 318 AHNVIKRYCNKLRKDRFADSSPKFSVQTILNKDLSISYVATVQLPTTSPLKKKIEGKPMQ 377

Query: 956 SMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
           + +LA+ A      K LH MG   + L+P
Sbjct: 378 NAKLAEMAAAFETAKMLHAMGELNEFLIP 406


>gi|297804712|ref|XP_002870240.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316076|gb|EFH46499.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 89/159 (55%), Gaps = 7/159 (4%)

Query: 1590 VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY 1649
            ++  +LE  L  KFKD+ LLV+A T AS        Y+ LE +GD++L+  I       Y
Sbjct: 28   LEIESLEKILNYKFKDKRLLVQAFTDASYVDDKCDSYEILELLGDSILNMSIIDEFIKLY 87

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG 1709
                PG LT LRA  V+ E  ARVAVKH+L+ +LRH    L+ QI +FV    E + K  
Sbjct: 88   PKESPGPLTKLRAVNVDTEKLARVAVKHQLYRYLRHKKPLLEEQILEFV----EAMEKYP 143

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQ 1748
             +S GL   K PKVL DIVES  GA+F D    T  VW+
Sbjct: 144  LHSNGL--LKVPKVLADIVESTIGALFRDCN-STETVWE 179



 Score = 43.1 bits (100), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 1347 LPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI-NYPVPASKIL-EALTAASCQETFC--Y 1402
            L  ++V G     +I       LL I+  +KI NY     ++L +A T AS  +  C  Y
Sbjct: 5    LSNTVVEGEDNTKTIGSTAPDQLLEIESLEKILNYKFKDKRLLVQAFTDASYVDDKCDSY 64

Query: 1403 ERAELLGDAYLKW-VVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            E  ELLGD+ L   ++  F+ L YP++  G LT++R   V    L + A+   L  Y++
Sbjct: 65   EILELLGDSILNMSIIDEFIKL-YPKESPGPLTKLRAVNVDTEKLARVAVKHQLYRYLR 122


>gi|2244899|emb|CAB10321.1| UFD1 like protein [Arabidopsis thaliana]
 gi|7268289|emb|CAB78584.1| UFD1 like protein [Arabidopsis thaliana]
          Length = 778

 Score =  112 bits (281), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 90/160 (56%), Gaps = 7/160 (4%)

Query: 1590 VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY 1649
            ++  +LE  L  KFKD+ LL++A T AS        Y+ LE +GD++L+  I       Y
Sbjct: 52   MEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLY 111

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG 1709
                PG LT LRA  V+ E  ARVAV H+L+ +LRH    L+ QI +FV    E + K  
Sbjct: 112  PKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFV----EAMEKYP 167

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQV 1749
             +S GL   K PKVL DIVES  GAIF+D    T  VW++
Sbjct: 168  LHSNGL--LKVPKVLADIVESTIGAIFMDCN-STETVWKI 204


>gi|161579129|gb|ABX72052.1| Dicer-1 protein [Tribolium castaneum]
          Length = 157

 Score =  112 bits (280), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/157 (42%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 1541 ALIGVYYVEGGKDAANHLMKWIGIQVESDPE-----EVGCPSRPAC----VPESVLRSV- 1590
            ALIG Y +E G   A   M W+GI+V    E     E+  P  P       P   L  + 
Sbjct: 1    ALIGAYLIECGPRGALLFMAWLGIRVLPQLEDGTYGEIELPKSPLSNHLTYPREELDMLL 60

Query: 1591 -DFHALEDALKIKFKDRGLLVEAITHAS-RPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
              +   E  +  KF+DR  L++A+THAS  P++   CYQRLEF+GDAVLD+LIT+HL+  
Sbjct: 61   DGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYED 120

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRH 1685
                 PG LTDLR+A VNN  FA +AV++  H + R+
Sbjct: 121  TRMHSPGALTDLRSALVNNTIFASLAVRNGFHRYFRN 157



 Score = 52.0 bits (123), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 1385 SKILEALTAASCQE---TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMV 1441
            S +L+ALT AS      T CY+R E LGDA L ++++R L+        G LT +R  +V
Sbjct: 78   SYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALV 137

Query: 1442 SNLVLYQYALSKGLQSYIQ 1460
            +N +    A+  G   Y +
Sbjct: 138  NNTIFASLAVRNGFHRYFR 156


>gi|313224452|emb|CBY20242.1| unnamed protein product [Oikopleura dioica]
          Length = 2082

 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 185/424 (43%), Gaps = 68/424 (16%)

Query: 1383 PASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            P S +L ALT  +  + F  ER E  GD+++K   +R L+ KY    +G+LT  R   +S
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729

Query: 1443 N---LVLYQYALSKGLQSYIQADRFA----PSRWA-----APGVLPVFDEDTKDGDSSLF 1490
            N   L L +  LS G  S +Q  R+      SR       APG L  +  D    ++ +F
Sbjct: 1730 NANFLKLLKLRLSDG--SCLQIPRYMNCYDNSRKTSGVIRAPGYLYSYKLDDNGDETDIF 1787

Query: 1491 ----DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVY 1546
                D  + V+E    T  NY  +            DS   RV   K  ADVVE+LIG Y
Sbjct: 1788 PPVTDCSQFVSETFRDTHFNYMFF------------DSKDKRV--DKKTADVVESLIGAY 1833

Query: 1547 YVEGGKDAANHLMKWIG----IQVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIK 1602
             V GG+  A   +  +     + V+S PE +         P+   +S+    L++ L+  
Sbjct: 1834 LVTGGEKMAARFVIMLNNLYTMTVDSSPEFL---EEDLVEPDPRTQSI-IDELQNELEYT 1889

Query: 1603 FKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT-NLPPGRLTDLR 1661
            FK   L   A+            ++RLEF+GDAVLD+L+   L+   +  L  G+LTDL+
Sbjct: 1890 FKTPHLCRLALAKKKYTKDPKDNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLK 1949

Query: 1662 AAAVNNENFARVAVKHKL-HVHLRHGSSALDR--------QIRDF-------------VK 1699
             +  +N  F  +A    L    L   S+A D         Q ++              +K
Sbjct: 1950 QSITSNNLFGSLAFCMGLPQSTLMKASAAKDHISCMYKLEQFKNLLNKPKHGVPLNPDLK 2009

Query: 1700 EVLEELLKPGFNSFGLGDCKA-----PKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             VLE+       S   G   +     PK  GD+ ES+ GA++LD  +    +W +++  +
Sbjct: 2010 RVLEKANWNNKTSNRAGPYSSYLLDIPKWFGDVFESMFGAVWLDCNQCLPEIWDIYKSKI 2069

Query: 1755 DPMV 1758
             P++
Sbjct: 2070 IPVM 2073


>gi|242221926|ref|XP_002476701.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724029|gb|EED78105.1| predicted protein [Postia placenta Mad-698-R]
          Length = 232

 Score =  112 bits (280), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 49/269 (18%)

Query: 1390 ALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQY 1449
            ALTA   QE   Y+R E LGD  LK++ S  LF  YP  HEG L R +   VSN+ L + 
Sbjct: 1    ALTAPVAQELINYQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKC 60

Query: 1450 ALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNE 1509
            A+SKGL  +I  DRF P +W      P +    +D  S          E   G + +  +
Sbjct: 61   AISKGLYQWIIRDRFVPRKWR-----PHYMSGPEDIGSR--------TEGANGNNDDKKK 107

Query: 1510 YEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESD 1569
                           +  + LS+K LADVVE+LIG  Y  GG D A + +   G+     
Sbjct: 108  --------------KTKTQELSTKVLADVVESLIGAAYEHGGFDLAVNCISIFGL----- 148

Query: 1570 PEEVGCPSRPACVPESV------LRSVDF-----HALEDALKIKFKDRGLLVEAITHASR 1618
                G PS    +P+ +      +  +D+       +E  L  +F  + LLV+A+THAS 
Sbjct: 149  ----GLPSW-QTIPQHIDNIMTKIEELDYPPPQLSLVETMLGYEFTHKALLVQALTHASY 203

Query: 1619 PSSGVS-CYQRLEFVGDAVLDHLITKHLF 1646
                 +  Y+RLEF+GD+ LD ++T  L+
Sbjct: 204  HGDLTTMSYERLEFLGDSALDMVVTDWLY 232


>gi|452988240|gb|EME87995.1| hypothetical protein MYCFIDRAFT_104430, partial [Pseudocercospora
            fijiensis CIRAD86]
          Length = 1360

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 183/455 (40%), Gaps = 100/455 (21%)

Query: 1337 LPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYPVP---ASKILEALTA 1393
            +P   C I  +P      A  +PS++ R++  L A  L+      +     + IL+AL +
Sbjct: 860  VPASECTIERMPARYALFAAFVPSMLHRLDLALTAAILQAGTLGDIDVKNTTLILDALCS 919

Query: 1394 ASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSK 1453
             S  E   Y R E LGD  LK      +  ++ ++ EG LT  R ++V N  L + AL  
Sbjct: 920  PSAGEPADYNRLEYLGDQILKHCAEVQVMAQHLKRPEGSLTLQRDKIVRNSTLAKAALQA 979

Query: 1454 GLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDD 1513
            GL  +I    F  ++W  P                                         
Sbjct: 980  GLDEFIITKPFTGAKWRPPSF--------------------------------------- 1000

Query: 1514 DMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEV 1573
                 +  G     R +S+KTLADVVE+L+G  Y++GG       +K +       P E+
Sbjct: 1001 ----SKTSGLDCGKREISTKTLADVVESLVGAAYLDGGLAKGLQCIKILL------PNEI 1050

Query: 1574 GCPSRPACV--------PESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSC 1625
              P  P C         P +    + F  LE  +  +F+ + LL++AITH + P  G   
Sbjct: 1051 WHP-LPHCFNLLLSDLGPAASHDGLSF--LERMIGHEFEHKQLLMQAITHVTCPYKGQLS 1107

Query: 1626 YQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN-------ENFA------- 1671
            Y+RLEF+GD+VLD +IT HLF     L    L     A VN         N+A       
Sbjct: 1108 YERLEFLGDSVLDLVITPHLFAHKRLLRHWELHQAHEALVNKYFLGYCCMNYAIEQDEND 1167

Query: 1672 RVAVK----------HKLHVHLRHGSSALDRQIR--------DFVKEVLEELLKPGFNSF 1713
             VAV            K+H++    + +   Q+R          V E+ E L   G   +
Sbjct: 1168 IVAVADGSYRAMPKLRKVHLYDFLRADSQTAQMRRTAVAKFDAMVPEIAERL--QGGTEY 1225

Query: 1714 G---LGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
                L     PK   DI+ES+ GA+++DS  D  V
Sbjct: 1226 PWPELVTLSPPKFFSDIIESVLGALYIDSRGDFGV 1260



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 16/215 (7%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++LE + +KN I  ++TG+GKT IA+  IR    +L+R +K  L  FL P   L 
Sbjct: 4   RSYQTEMLEASVQKNIIVAMDTGSGKTHIALARIRV---ELERNDK--LVWFLTPSKTLA 58

Query: 365 YQQAEVIR-EQTGYVVGHYCGEMGQDFWDAQ-RWQREFDTKQVLVMTAQILLNILRHSII 422
            QQ +V+  E +GY      G    D W  Q  W       +++V T  ILL+ L H+ +
Sbjct: 59  EQQHQVLSAELSGYGTRLLTGADACDKWSDQGLWTAALTNVRLVVATPAILLDALTHAFM 118

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASP-VNLKGVSSQ 479
            M  + L + DE HH  KKHP + +M  FY    +  E  P + G++ASP +     +  
Sbjct: 119 HMTRLALCVFDEAHHCTKKHPMNSIMQLFYRPARERGESVPHILGLSASPHLPEAAAADH 178

Query: 480 VDCAIKICNLESKLDSVVCTIKD-RKELEKHVPMP 513
           V   I     ES L+++  T K  R+EL+  V  P
Sbjct: 179 VRRTI-----ESNLNAITVTPKQHRRELDTFVHPP 208



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 40/331 (12%)

Query: 702  VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNN 760
            +T K   L+++LLK+      R IIFVE+ V    L +    LP L+   + A+ +G + 
Sbjct: 350  ITAKATELLELLLKHA-DPSLRGIIFVEQRVLVTALAEWLRGLPQLNDQYQIAAFVGTST 408

Query: 761  SQ-------EMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
            S        ++ T Q Q   +  FR G   L+VAT+V EEG+DI  CN+VI FD  + ++
Sbjct: 409  STNRKISVADLVTLQDQARDLEAFRRGEKNLMVATNVLEEGIDISACNLVICFDPPQNLV 468

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHA----TFLRNARN---SEETLRK-EAIERTDLS 864
            +++Q RGRAR+  S Y +  +  ++  A    T L  A     S++T +  EA+E  DL 
Sbjct: 469  SFVQRRGRARQQHSKYFIFTKANDIGKAKQPWTLLEAAMKELYSDDTRQVCEALESHDLD 528

Query: 865  HLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDR--YSILRPEFIM 922
                 SR          +YQV+ST A+++L++A   ++ +CS   S+   Y  LRPEF  
Sbjct: 529  ---KESR----------IYQVQSTQALLTLDNAKSHLYHFCSVCISNAAGYVDLRPEFDT 575

Query: 923  ERHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSM---RLAQQAVCLAACKKLHEMGAFT 979
             + ++      ++  + LP     +        S     LA +     A   LH+ G   
Sbjct: 576  SQDQETH---LWTATVDLPAFVHPDLRSARSAESWSREELAIKDAAFEAYVALHQAGLIN 632

Query: 980  DMLLPDKGSGEQQEKVDQN-DEGEPLPGTAR 1009
            D LLP     E+ E   ++ D+   + G+ R
Sbjct: 633  DNLLPPLHEHEESESSGRHSDQSRLVDGSNR 663


>gi|261329404|emb|CBH12385.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 824

 Score =  111 bits (278), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 258/570 (45%), Gaps = 97/570 (17%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + RPYQ ++ E+A + ++I +L TG GKT++A     +I + ++R+++K + VF+V +VP
Sbjct: 19  ELRPYQQELFEKAIRGDSIIYLPTGGGKTVVAA----AIAHYMRRKHEKRI-VFVVNRVP 73

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK-QVLVMTAQILLN-ILRHS 420
           LV QQA+V+    G   G     +       + W    D     +V+T  I    I+   
Sbjct: 74  LVAQQAKVLESVLGK--GSRVATVRGGKKSVKSWSVLMDEGYDGVVITDSIFHEWIIGSP 131

Query: 421 IIKMEAINLLILDECHHA----VKKHPYSLVMSEFYHT--------------TSKEKRPS 462
               E   L+++DE H+A    +KK      + E+ H                S+   P 
Sbjct: 132 KAITEDTCLVVIDEVHNATGGCLKK------IFEYIHRICPREPQRCASNDGVSEPTLPL 185

Query: 463 VFGMTASPV-------NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSE 515
           + G+TASPV       +L  +     C  +I N+  K+D+++          + VP+P  
Sbjct: 186 LLGLTASPVLSFTRSDSLNKLIDVTRC--RIVNVTEKMDNLL----------QEVPLPLT 233

Query: 516 VVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
           V VEY  +    +    L++  VA+++  Q                  K+      G + 
Sbjct: 234 VGVEYYLSPPEEAFLFYLQRAAVALQDNLQ-----------------VKKNAHLRAGFAC 276

Query: 576 RTESDGAANLIQ--KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESY 633
              SDG  N     K++A +   GE+ ++ AY +A   L   Q   + N   +V    +Y
Sbjct: 277 PVASDGYINRCNEIKVKACSGTSGEVDRF-AYSIATFLLCVSQAFVKLN---EVSLGSAY 332

Query: 634 LSKVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVII 693
            + +   L   L E   S + A++V      +EG    + E          G +   V  
Sbjct: 333 KTVMDDKLFKSLQE---SPESAELVVP---ILEGLMKLLRESRHKYPERDPGQDDSSV-- 384

Query: 694 GAAVADGKVTPKVQSLIKILLKY-QHTE----DFRAIIFVERVVAALVLPKVFAELPSLS 748
                  +V+ +VQ L+++L    +H E    +   IIF +   +   + +   ++P+LS
Sbjct: 385 --GFDPFEVSSRVQFLLQLLSWIGKHVEANNGEVAGIIFCDTRASVFRITEAIEKIPTLS 442

Query: 749 -FVKSASLIGHNNS------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
              K  +L+G   +      + M   Q ++ I +FR G   LLVATS+AEEGLDI QCN+
Sbjct: 443 SLYKPRALVGKGKTLVDGEEKGMTDAQQRDVIDEFRKGNTRLLVATSLAEEGLDIAQCNL 502

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILM 831
           VIR+D   ++ ++IQSRGRAR+  + +I+ 
Sbjct: 503 VIRYDSCVSLRSFIQSRGRARRRNALFIVF 532


>gi|301612421|ref|XP_002935717.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Xenopus
           (Silurana) tropicalis]
          Length = 1032

 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 234/553 (42%), Gaps = 71/553 (12%)

Query: 303 QARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           + R YQ ++ + A   KNT+    TG+GKTL+++++ +    +     KK   +F+  KV
Sbjct: 261 KLRKYQEELAKPAFTGKNTMICAPTGSGKTLVSLVICKHHL-ECMPNGKKGKVLFMATKV 319

Query: 362 PLVYQQAEVI---REQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P+  QQ +V     E + Y V    GE  ++F          +   ++++T QIL+N L+
Sbjct: 320 PVYEQQKDVFCKYFEGSRYKVEGVSGETAENFPVGLV----IENSDIIILTPQILVNCLQ 375

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYH---TTSKEKRPSVFGMTAS--PVN 472
              +  +   +++I DECH+ +  HPY+++M  +            P + G+TAS     
Sbjct: 376 SGTVPSISVFSMMIFDECHNTIGNHPYNVLMFSYLDLKLNMPGVALPQIIGLTASVGTGK 435

Query: 473 LKGVSSQVDCAIKIC---NLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSL 529
            K +   +    ++C   N+E     V+ T+K+ KE        +E V +  K+ S+   
Sbjct: 436 AKSLPEAIHYITRLCASLNIE-----VISTVKEHKE------ELAETVFKPTKSISIAPQ 484

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKL 589
            E      +  E              M   +  AK+   ++Y +S              +
Sbjct: 485 RENDSFTAIMSE-------------IMSETEKMAKDFYPELYSMS-------------NI 518

Query: 590 RAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGA 649
           +  +Y   +  QW      Q     LQ D++           +Y   +       ++   
Sbjct: 519 QNRSYGTQKYEQWIV--DTQKKCCVLQMDDKNKEMRICSSLFTYTEHLRKYNDSIMINDD 576

Query: 650 VSKKDAK--VVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
              KDA   + +  N    G  NEIE+ +L +       + +D      ++   + PK++
Sbjct: 577 ARTKDALDFLENFFNNMKNGSFNEIEQ-KLYNMFQDKLPQLLD------ISKNNINPKLE 629

Query: 708 SLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG---HNNSQE 763
            L  IL + Y    + R+++FV+       L     E P L F+K   LIG    N S  
Sbjct: 630 ELQFILDESYHENPETRSLLFVKTRSLVSALKTWIEENPLLQFLKPEILIGRSKRNESLG 689

Query: 764 MRTFQMQETIAKFRD-GRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
           M     +  +  F++     LL+ATSVA+EG+DI+ CN+V+ ++    V   IQ RGR R
Sbjct: 690 MTLSSQKGALEAFKNSAESKLLIATSVADEGIDIQACNLVLLYEYVGNVTKMIQVRGRGR 749

Query: 823 KPGSDYILMIERG 835
              S   L+  +G
Sbjct: 750 AKDSKCFLITSKG 762


>gi|159473675|ref|XP_001694959.1| dicer-like protein [Chlamydomonas reinhardtii]
 gi|158276338|gb|EDP02111.1| dicer-like protein [Chlamydomonas reinhardtii]
          Length = 1927

 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++L  A++  +T+ + ETG GKT IAV  I     +L    +  LA FL P VPL
Sbjct: 9   REYQAELLRMARRHASTVIYAETGTGKTRIAVERILEAHGELVAAGR--LAAFLAPTVPL 66

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQAEV+    G  V  Y GE  +D  +   WQR      VL  T   L  ++ H+ I 
Sbjct: 67  VRQQAEVL-VAAGLRVVVYTGEDNRDARNRAGWQRLHQEADVLCATPDALNRLIAHAFIT 125

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEKRPSVFGMTASP 470
           +  + +++ DECHH    HPY++++  F  H T  ++RP + G+TASP
Sbjct: 126 IPQLGMIVFDECHHTNANHPYAVLLRVFVRHLTPPDQRPVLLGLTASP 173



 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 25/307 (8%)

Query: 702 VTPKVQSLIKILLKY---QHTED-----------FRAIIFVERVVAALVLPKVFAELPSL 747
           VTP VQ +++ LL     +H  D           + A++F +R VA + L ++  ELP+ 
Sbjct: 569 VTPAVQWVVRSLLALSTQRHPADSGGDGVSVSSGWSAMVFCQRKVACVALHRLLTELPAA 628

Query: 748 --SFVKSASLIG-----HNNSQEMRTFQMQETIAK-FRDGRVTLLVATSVAEEGLDIRQC 799
               ++ A  +G     H+ S      + QE + + F  G + +L++TSV  EGLD R C
Sbjct: 629 RGGAIRPAVFMGNTGAGHSASSLAMDGRKQERVRRAFSSGALNVLISTSVGAEGLDFRTC 688

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
           N VI  D    V  ++Q  GRAR PGS Y L+  R +       + +R   + + K    
Sbjct: 689 NAVIMVDPPDHVTPFVQCAGRARAPGSCY-LLFARDDRQQQAIAKRSREEADMVAKALKL 747

Query: 860 RTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSI-LRP 918
            T  +      +       P     V+     +  N    L+  YC  LP +   + L+P
Sbjct: 748 STAAAREAQQRQQTDPPVNPFFSQDVDVVTEELQQNLFRNLLESYCRTLPGNSGDVLLQP 807

Query: 919 EFIMERHEKP-GGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGA 977
            +  + +E P      +   + +P N+P   +EGP+ S+   A+Q  C+A  ++L+E+GA
Sbjct: 808 YYSYQEYESPLTRRKAFVATVHMPANSPLGVVEGPMQSNKGDARQHACMATVRRLYELGA 867

Query: 978 FTDMLLP 984
             + LLP
Sbjct: 868 LDEHLLP 874



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 46/155 (29%)

Query: 1399 TFCYERAELLGDAYLKWVVSRFLF---LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGL 1455
             F  ER E LGDA LK++ + +++      P  HEG ++  R Q+V+N  LY  AL  GL
Sbjct: 1398 AFDCERLETLGDAVLKYLATLYVYGTERDVPVSHEGVMSYKRDQLVANEALYGRALEAGL 1457

Query: 1456 QSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDM 1515
            Q +++A             LP             +D E+ +        +++N  E    
Sbjct: 1458 QHHMRA-------------LP-------------YDMERVL------RGRHWNTGE---- 1481

Query: 1516 EDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEG 1550
                   +++  + +  K LAD VEAL+G +   G
Sbjct: 1482 -------EAARAQEVRGKRLADCVEALVGCHLAPG 1509


>gi|344313225|gb|AEN04472.1| retinoic acid-inducible protein I [Carassius auratus]
          Length = 947

 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 253/567 (44%), Gaps = 99/567 (17%)

Query: 301 EEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICN-DLQRQNKKMLAVFLV 358
           E + R YQ ++   A + +NTI    TG GKT++A+    +IC   L++  ++   VFL 
Sbjct: 254 EIKLREYQKELTAAAVQGQNTIICAPTGCGKTIVAL----AICEYHLKQSPRRAKIVFLA 309

Query: 359 PKVPLVYQQAEVI-----REQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQIL 413
            KV +  QQ ++      R      V   CG+M        +W  E     ++VMTAQIL
Sbjct: 310 TKVDVYEQQYKLFMKHFSRTDPSIRVMGMCGDMDLSV----QWLIE--NHDIVVMTAQIL 363

Query: 414 LNILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT---TSKEKRPSVFGMTAS 469
           +N L+   +  +E ++L++LDECH+   KHPY+ +M+ +  T   +S    P + G+TAS
Sbjct: 364 VNALQSGEVPSLELLSLILLDECHNTTGKHPYNNIMTRYLDTKLSSSTHSLPQIVGLTAS 423

Query: 470 PVNLKGVSSQVDCAIKICNLESKLDS-VVCTIKDR-KELEKHVPMPSEVVVEYDKAASLW 527
            V +    ++++    I  L + LD+ V+ T+K +  EL+ +V  P +   E  K  +  
Sbjct: 424 -VGIGSFKNRLEAENNILQLCANLDTRVITTVKKQLDELKTYVHTPEKEFFEVSK-HTYD 481

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
                +K +   +E+ AQ +        +  R+ G+++  + +  V             Q
Sbjct: 482 PFIRIIKNIMSNIEQLAQKAFNIESLSNIQNREYGSQKYEQWIVSV-------------Q 528

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
           K R               +V Q   T   N+ER   +    + E +L K    L   ++ 
Sbjct: 529 KSR---------------RVIQMKDT---NEERRICRELYNYTE-HLRKYNDAL---IIN 566

Query: 648 GAVSKKDAKVVDSENGFVE----GGTNEIEE--GELLDS------HVVSGGEHVDVIIGA 695
                KDA  +D  +GF E     G +E E     L DS      H+ S G+        
Sbjct: 567 EDARTKDA--LDYLDGFFEQVRNAGYDETERKLTALYDSQRPQLLHLASEGQQ------- 617

Query: 696 AVADGKVTPKVQSLIKIL-LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS 754
                   PK++ L  IL  +YQ+ ++ R ++ V+    A  + K   +  SL F+K   
Sbjct: 618 -------NPKLEELKFILEEEYQNNDETRTVLLVKTRALADAMKKWIDDTDSLKFLKPGV 670

Query: 755 LIGHNNSQEMRTFQMQETIAK-----FRDG-----RVTLLVATSVAEEGLDIRQCNVVIR 804
           LIG           M  T  K     F+       +  +L+ATSVA+EG+DI QCN+V+ 
Sbjct: 671 LIGKGRKSNFTGSVMTLTSKKGVLDSFKSTDQNSDQSKILIATSVADEGIDIPQCNLVLM 730

Query: 805 FDLAKTVLAYIQSRGRARKPGSDYILM 831
           ++    V+  +Q RGR R  GS   L+
Sbjct: 731 YEYVGNVVKMVQVRGRGRAQGSRCFLI 757


>gi|167046032|gb|ABZ10547.1| dicer-like protein E [Trichoplax adhaerens]
          Length = 359

 Score =  111 bits (277), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 164/396 (41%), Gaps = 72/396 (18%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EA+T +S Q+ F  ER E LGD YL + ++    L++P     ++    + +  N  L++
Sbjct: 1    EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60

Query: 1449 YALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
                + +  YI    F  ++ W  PG                F   ++V+E  +   + Y
Sbjct: 61   LGAGRRIPYYIVGCPFNQNKSWVPPG----------------FVINQTVSELSIAMSREY 104

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                              +++ L+ K +AD VE LIG   +  G+++    M+W+G ++ 
Sbjct: 105  ------------------THQPLTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEIS 146

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDF---------HALEDALKIKFKDRGLLVEAITHASR 1618
               + +          + ++ S+DF         +++E  L   F++R LL+ A+TH S 
Sbjct: 147  ECLDGI----------QELIPSIDFRTNLYSETANSVETILNYSFRNRSLLMLALTHKSY 196

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
                   Y++L F+GD +L + I   L+  YT+  P     L      N  +  VA+   
Sbjct: 197  SGLESISYEKLAFLGDTLLIYQICLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASD 256

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK-----------------AP 1721
            L   L H S  L  QI D + + LE      F+S     C                   P
Sbjct: 257  LCKFLLHKSRELTLQI-DEIYQALEADDVQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVP 315

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            K LGD   ++  A+FLD+  D     ++   LL+P+
Sbjct: 316  KELGDTFAAVVAAVFLDNYPDEDTAGRIINSLLNPI 351


>gi|449550119|gb|EMD41084.1| hypothetical protein CERSUDRAFT_131598, partial [Ceriporiopsis
            subvermispora B]
          Length = 1587

 Score =  111 bits (277), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 116/237 (48%), Gaps = 15/237 (6%)

Query: 1248 RFYVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYK-QKYGVE--LIFKKQPLIRGRGV 1304
            R++  +IR ++T  S    K   L    Y S+ +Y K +K+G E  L     P+++    
Sbjct: 835  RYFTVAIRPDLTPLS---EKHDSLREQPYGSFFEYCKARKHGFEGWLAHPDAPMVQVTPA 891

Query: 1305 SYCKNLLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRR 1364
                N L+P  +            L KT   +L PELC    +P S  R    LP IMRR
Sbjct: 892  PPLVNNLNPVVKPPTYP-------LAKTPAKYLIPELCHRLTIPASSYRTTLLLPCIMRR 944

Query: 1365 VESMLLAIQLKDKI-NYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFL 1423
            ++  LL  +L  K+  + +    +L AL   S    F YER E LGDAYLK++ S + F+
Sbjct: 945  IDDQLLIKELNAKLFQHSISEHHLLPALFPPSADAEFDYERLEFLGDAYLKYLSSTYCFV 1004

Query: 1424 KYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDE 1480
              P+K+EG L   RQ+ +SN  L   ++  GL SY+Q+  F    W  P V P F+E
Sbjct: 1005 TMPRKNEGALHYARQRYISNKALRTGSVRLGLPSYVQSKAFVAKLW-TPSVAPEFEE 1060



 Score =  109 bits (272), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 28/347 (8%)

Query: 1530 LSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRS 1589
            L  K  ADVVEA+IG  Y+ GG++ A    K + + + +D E+    +R A        S
Sbjct: 1223 LGDKVCADVVEAIIGAAYLSGGQEVALRAAKVLNVGM-TDIEQWSDFARRATFITDPPAS 1281

Query: 1590 VDFH--------ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 1641
               H        A+E  +  +F+   LL++A+THAS     V  Y RLEF+GDA+LD L+
Sbjct: 1282 TRTHRGFLEMLRAVEGIVGCRFEKPHLLLQALTHASIRGYEVLNYDRLEFLGDAILDFLV 1341

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
             ++++  + NL  G LT L+ A V+N   A   V   L  +  H S      I+ + + +
Sbjct: 1342 IRYVYERHHNLSSGGLTLLKVAMVSNHVLAAFCVYCGLWQYALHASPDYAIAIQAYYERI 1401

Query: 1702 -----LEELLKPGFNSFG---LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW----QV 1749
                  EE L             D + PK+L D+VE++ GA+++  G   + +      V
Sbjct: 1402 NNSRAQEERLAASEGRLPGQYWHDTEPPKILSDVVEAVLGALYVSDGFSEANIVNFFDNV 1461

Query: 1750 FQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKA---SRSGNLATVEVYIDGVQVGV 1806
            F+P  D  +  +TL  HP + L E    QAEG +         GN+   +V +  V +  
Sbjct: 1462 FRPFYDRHIRLQTLSQHPKKTLFE--LMQAEGCQEHGIVKEVEGNVVRADVVVHDVVLAS 1519

Query: 1807 AQNPQKKMAQKLAARNALAVLKEKE--TAEAKEKGDENGKKRKNGTQ 1851
            A +P    A + A+  AL  L+      A   + G +  KK++   +
Sbjct: 1520 ATDPSTVAAVRRASLWALDALEGDPDFVARTCDCGSKPSKKKQKALE 1566



 Score = 80.1 bits (196), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 165/382 (43%), Gaps = 30/382 (7%)

Query: 626 DVKFQESYLSKVVSLLQCELVEGAVSK---KDAKVVDSENGFVEGGTNEIEEGELLDSH- 681
           +VKFQE+ L++  +L Q +   G++S    KDA+ V  E G            + L+ H 
Sbjct: 245 NVKFQETALAQ--TLRQAD-TGGSISPRLFKDARRVLRELGRCAADLYWRTVSDSLNQHL 301

Query: 682 --VVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQ-HTEDFRAIIFVERVVAALVLP 738
             +V+        + +      V PK  +L+ IL   + + +D R II V R V A ++ 
Sbjct: 302 QHIVNNWTFDMPNVESGSPRSNVAPKCATLVDILKACEPYADDLRCIILVRRRVVANMIA 361

Query: 739 KVFAELPS-LSFVKSASLIGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIR 797
           ++  +L   L FV  A + G   + E       E +A F  G   +LV T  A E +++ 
Sbjct: 362 ELLRQLDDELEFVHPAVVTGATLTNEPDA--CSEILANFSAGLCNVLVVTR-ASEDIEVP 418

Query: 798 QCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRK-- 855
           + ++VIRF++ ++ L+Y  S   +    S  + M ERGN +H   L      +  L++  
Sbjct: 419 KSSLVIRFNVLESQLSYANSHALSSGRQSHLVHMAERGNNTHHRILSFVTTLDNKLQEWI 478

Query: 856 --------EAIERTDLSHLKDTSRLISVDAVPGTVYQVES-TGAVVSLNSAVGLIHFYCS 906
                    A    +L    D  R    D      +  +  T A +    A+ +++   +
Sbjct: 479 THMASNPCGATPPGNLHESIDPYRSDDEDTADNDDHLKDPVTSAPLFKRDAMSVVYRLAA 538

Query: 907 QLPSDRYSILRPEF--IMERHEKPGGPTEYSCKLQLP--CNAPFEKLEGPVCSSMRLAQQ 962
            L      + RP F  +  + E  G P  + C + LP   + P   + GP C+++  A++
Sbjct: 539 SLQKTEEFVPRPLFALVTLQSELDGSPL-FRCTVHLPESPSLPLAPVTGPPCTTVSEARK 597

Query: 963 AVCLAACKKLHEMGAFTDMLLP 984
           A C   CK+L + G     L P
Sbjct: 598 AACFCLCKELADKGVLDYHLYP 619



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 29/172 (16%)

Query: 1387 ILEALTAASCQ--ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            +L+ALT AS +  E   Y+R E LGDA L ++V R+++ ++     G LT ++  MVSN 
Sbjct: 1309 LLQALTHASIRGYEVLNYDRLEFLGDAILDFLVIRYVYERHHNLSSGGLTLLKVAMVSNH 1368

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
            VL  + +  GL  Y        +  A+P          +  ++S   +E+  A +     
Sbjct: 1369 VLAAFCVYCGLWQY--------ALHASPDYAIAIQAYYERINNSRAQEERLAASEGRLPG 1420

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAAN 1556
            + +++ E                     K L+DVVEA++G  YV  G   AN
Sbjct: 1421 QYWHDTE-------------------PPKILSDVVEAVLGALYVSDGFSEAN 1453



 Score = 50.8 bits (120), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 30/230 (13%)

Query: 308 QLDVLEQAKKKNTIAFLETGAGK-TLIAVLLIRSICNDLQRQN----KKMLAVFLVPKVP 362
           Q DVL +AK +N IA +ET   K  LI  +L RS+  + +R      ++ + +F+V    
Sbjct: 27  QEDVLSRAKTENVIAVVETIHVKHELIRQILTRSVEAERRRAADDGPERRVVLFIVDDNS 86

Query: 363 LVYQQA-EVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
            + + A E+    + + V  Y   M     D  +W R      V+V++A +LL+ L+   
Sbjct: 87  AISRYATELAHMDSNFTVSAYTLAMHTTGID--QWSR-VRKHDVVVVSANLLLDSLQELS 143

Query: 422 IKMEAINLLIL---DECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSS 478
           +     +LL++   D        HP   ++SE+Y       RP  F +       K    
Sbjct: 144 VDFSQSHLLVISDADRIPTVQAPHPIIRIVSEYYSVIDPSVRPPAFSLFTCSAGRKN--- 200

Query: 479 QVDCAIKICNLESKLDSVVCTIK-------DRKELEKHVPMPSEVVVEYD 521
                + +   E  LD++  +IK       D   L +    P EVV  YD
Sbjct: 201 ----RVNVSRHEDLLDAIAYSIKGDDHPLPDSDTLNR----PMEVVALYD 242


>gi|345288249|gb|AEN80616.1| AT1G01040-like protein, partial [Neslia paniculata]
          Length = 207

 Score =  110 bits (276), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 129/261 (49%), Gaps = 59/261 (22%)

Query: 59  FFGGIDHILDSIKNGSGLPNSNGNLLKNGSEDSTGGENHQAEGLILLSNNGSDKDGVDRK 118
           FFGGIDHILDSIKNG       G L  +G  ++    +H  E  +               
Sbjct: 1   FFGGIDHILDSIKNG-------GGLPNHGVSETN---SHIKEVSVTTPQ----------- 39

Query: 119 RKLENCENVNGYLVNGKAGGRLSDHFTKENGVHRDNGNNDHEASRIRDFDSEDRFSKRAR 178
                       L+ G+    ++    K+NG+ ++ G  D       D D      KRA+
Sbjct: 40  ------------LIPGE----ITTFSVKDNGLQKNGGKRDQVCKEEGDKDC-----KRAK 78

Query: 179 V-SVCKNESQYSSRGQYCSSDKDRVFGRKRLRDLDDIGRRDRDPMRRREHYNGSSRKDVR 237
           V S   + S  S RGQ  S DKDR   RKR R+ D+         ++R+ YN        
Sbjct: 79  VCSYQSDRSNLSGRGQANSRDKDRFMNRKRTRNWDEAVH-----NKKRDSYNHR------ 127

Query: 238 DKDFRDREPRGYWERDRLGSNGMVFRLGSWEADHNRAGKEANGINQECNGKV----GKKS 293
            +D RDRE RGYWERD++GSN +V+R G+WEADH R  K+ +G  +ECN        K  
Sbjct: 128 -RDGRDREVRGYWERDKVGSNELVYRSGTWEADHERDVKKESGRTRECNDMAEENKSKPE 186

Query: 294 EAKEKMPEEQARPYQLDVLEQ 314
           E KEK+ EEQAR YQLDVLEQ
Sbjct: 187 ERKEKVVEEQARRYQLDVLEQ 207


>gi|313212467|emb|CBY36441.1| unnamed protein product [Oikopleura dioica]
          Length = 2196

 Score =  110 bits (275), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 199/464 (42%), Gaps = 95/464 (20%)

Query: 1383 PASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            P S +L ALT  +  + F  ER E  GD+++K   +R L+ KY    +G+LT  R   +S
Sbjct: 1670 PPSLLLRALTQPTANDFFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYIS 1729

Query: 1443 N---LVLYQYALSKGLQSYIQADRF---------------AP------SRWAAPGVLPVF 1478
            N   L L +  LS G  S +Q  R+               AP      +    P   P +
Sbjct: 1730 NANFLKLLKLRLSDG--SCLQIPRYMNCYDNSRKTSGVIRAPGYVYSYNENFCPNAQPWY 1787

Query: 1479 DEDTKDGDSSLF----DQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKT 1534
              D    ++ +F    D  + V+E+   T  NY  +            DS   RV   K 
Sbjct: 1788 KLDDNGDETEIFPPMTDCSQFVSENFRDTHFNYMFF------------DSKDKRV--DKK 1833

Query: 1535 LADVVEALIGVYYVEGGKDAA-------NHLMKWIGIQVESDPEEVGCPSRPACVPESVL 1587
             ADVVE+LIG Y V GG+  A       N+L K   + V+S PE +         P+   
Sbjct: 1834 TADVVESLIGAYLVTGGEKMAARFVIMLNNLYK---MTVDSSPEFL---EEDLVEPDPRT 1887

Query: 1588 RSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFF 1647
            +S+    L++ L+  FK   L   A+            ++RLEF+GDAVLD+L+   L+ 
Sbjct: 1888 QSI-IDELQNELEYTFKTPHLCRLALAKKKYTKDPKDNFERLEFLGDAVLDYLVVDELYN 1946

Query: 1648 SYT-NLPPGRLTDLRAAAVNNENFARVAVKHKL-HVHLRHGSSALDR--------QIRDF 1697
              +  L  G+LTDL+ +  +N  F  +A    L    L   S+A D         Q ++ 
Sbjct: 1947 RRSAALDSGQLTDLKQSITSNNLFGSLAFCMGLPQSTLMKASAAKDHISCMYKLEQFKNL 2006

Query: 1698 -------------VKEVLEELLKPGFNSFGLGDCKA-----PKVLGDIVESIAGAIFLDS 1739
                         +K VLE+       S   G   +     PK  GD+ ES+ GA++LD 
Sbjct: 2007 LNKPKHGVPLNPDLKRVLEKANWNNKTSNRAGPYSSYLLDIPKWFGDVFESMFGAVWLDC 2066

Query: 1740 GRDTSVVWQVFQPLLDPMV--------TPETL-PMHPVRELQER 1774
             +  S +W +++  + P++         PE +  ++P RE+ +R
Sbjct: 2067 NQCLSEIWDIYKSKIIPVMGIEGNRAYDPEFINTLNPRREIGKR 2110


>gi|348569861|ref|XP_003470716.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Cavia
           porcellus]
          Length = 914

 Score =  110 bits (274), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 240/556 (43%), Gaps = 95/556 (17%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           +AR YQL++   AK+ KNTI    TG GKT +++L+          Q +K   VF    V
Sbjct: 243 KARNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLLKFP-QGRKGKVVFFANHV 301

Query: 362 PLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR 418
           P+  QQ  V     E+ GY V    G   +    A+      +   ++V+T QIL+N L+
Sbjct: 302 PVYEQQKTVFSRYFERLGYSVTGISGATAEKVPVAET----IENNDIIVLTPQILVNNLK 357

Query: 419 HSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV-NLKGV 476
           +  I  +    L+I DECH+  K HPY+  M  F +   K       G ++ P+  + G+
Sbjct: 358 NGTIPSLSVFTLMIFDECHNTSKHHPYN--MIMFNYLDQK------LGESSDPLPQVIGL 409

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
           ++ V                   + D K +E+ +    ++    D A+ + ++ E L+++
Sbjct: 410 TASVG------------------VGDAKNIEEAMAYICKLCASLD-ASVIATVKENLEEL 450

Query: 537 EVAVEEAAQSSSR---RSKWQF-------MGARDAGAK---EELRQVYGVSERTESDGAA 583
           E  V +  + S +   R+  +F       M   +  AK   EEL  ++ + +R       
Sbjct: 451 EQVVYKPQKISRKVEPRTTNKFKLILCELMKETEYLAKSISEELGYLFQIQDRV------ 504

Query: 584 NLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQC 643
                     +   +  QW         + A+    R  +Q+  K +ES + K + L   
Sbjct: 505 ----------FGTQKYEQW---------IVAVHKACRL-FQMPDKEEESRICKAMYLYTS 544

Query: 644 ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
            L      K +  ++ SE+  ++   N +++     S+V +     D I        +V 
Sbjct: 545 HL-----RKYNDTLIISEDAQMKDALNYLKD---FFSNVRTAA--FDDIEQDLTRRFEVY 594

Query: 704 PKVQSLI---KILLK--YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH 758
             V S +    ++L+  Y    + R I+FV+       L K   E  +L+F+K   L G 
Sbjct: 595 TCVTSCVLRTHLILQEEYHLNPETRTILFVKTRALVDALKKWIEENSALNFLKPGILTGR 654

Query: 759 ---NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
              +N   M     +  +  FR     +L+ATSVA+EG+DI QCN+VI ++    V+  I
Sbjct: 655 GKTSNKTGMTLPAQKCVLDTFRSNGDNILIATSVADEGIDIAQCNLVILYEYVGNVIRMI 714

Query: 816 QSRGRARKPGSDYILM 831
           Q+RGR R  GS   L+
Sbjct: 715 QTRGRGRAKGSKCYLL 730


>gi|297794783|ref|XP_002865276.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311111|gb|EFH41535.1| hypothetical protein ARALYDRAFT_494464 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 892

 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 131/251 (52%), Gaps = 17/251 (6%)

Query: 1586 VLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            ++ S    A+E  L   F ++ LL E +TH + P      +QRL FVG+  L    TKHL
Sbjct: 344  LMDSDSVEAVEKILNYSFVNKNLLNELLTHNTSP-----LFQRLMFVGEPALSLAFTKHL 398

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            + +Y  L P  L+ LR A   N+ +ARVAVK  ++  +       +R I DF+ +++ + 
Sbjct: 399  YLTYPKLEPKDLSLLRDANACNDRYARVAVKKGIYQFIISNVEKPERMILDFI-DMMGKE 457

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL-- 1763
              P  + + +   KAPK+L ++V ++AGA+++D   +   +W++F+ L +P+ T + L  
Sbjct: 458  DDPDPDPYRV--VKAPKILANLVAAVAGAVYIDVNYNVQRLWEIFRGLFEPIYTLDDLRM 515

Query: 1764 -PMHPVRELQERCQQQAEGLEYKASR----SGNLATVEVYIDGVQVGVAQNPQKKMAQKL 1818
             P  P   L     +  + ++++ S+      N+A  +VY+D + +    + +   A+ L
Sbjct: 516  QPKPPFLMLFRLADKHGKRIDFRYSKVDGSRKNIA--QVYLDDMFIASGCSKRIDTAKLL 573

Query: 1819 AARNALAVLKE 1829
            AA  AL  L E
Sbjct: 574  AAEEALQKLSE 584



 Score = 62.4 bits (150), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 6/81 (7%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLP 1653
            A+E  L   F ++ LL +AIT  S      + + RLEF GD+VL+   T ++  +Y NL 
Sbjct: 6    AVEKILNYSFTNKTLLKDAITQRS------TLFDRLEFFGDSVLEVAFTNYIRHTYPNLK 59

Query: 1654 PGRLTDLRAAAVNNENFARVA 1674
               L DLR A V+NE FARVA
Sbjct: 60   VKELCDLRTANVSNEKFARVA 80


>gi|290993372|ref|XP_002679307.1| dicer helicase [Naegleria gruberi]
 gi|284092923|gb|EFC46563.1| dicer helicase [Naegleria gruberi]
          Length = 857

 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 125/247 (50%), Gaps = 30/247 (12%)

Query: 285 CNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICND 344
           C+  V   S A   +    AR YQ +++E  K +NTI    TGAGKT IA LLI  + N 
Sbjct: 89  CSESVVSNSTATSTLLS-NAREYQKELVEHCKDENTIIVAPTGAGKTFIAALLIHHMLN- 146

Query: 345 LQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQ 404
                KK+L  F+V ++ LV QQA  +RE     VG + GE        + W+ E     
Sbjct: 147 -LNPFKKVL--FIVNQISLVEQQARALREFGIEKVGAFHGEKKS----IKNWKLETKDFT 199

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---- 460
           VLV T QI+LN+L++S I  + + LLI DECHH    HP+ ++M ++Y    K ++    
Sbjct: 200 VLVCTIQIILNVLQYSDI-FDDLQLLIFDECHHTHSNHPFKVLMRDYY----KPRKHAGL 254

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIK----DRKELEKHVPMPS 514
             P + G++A+P     ++   +  +KI  L   LD   CT++    + +EL   V  PS
Sbjct: 255 LIPRILGLSATPAAKNTIA---ETLLKILQLGHDLD---CTVRQVENNEEELGTFVFTPS 308

Query: 515 EVVVEYD 521
              +  D
Sbjct: 309 MKSISVD 315



 Score = 73.9 bits (180), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 5/123 (4%)

Query: 708 SLIKILLKYQHT-EDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHNNSQEMR 765
           +L K+L +Y+ T ++ RA+IFV+  +      +     P L  ++K   L+G +    M 
Sbjct: 415 ALAKLLKQYKETGKELRALIFVKTRIGCKETLEFLQSEPDLKDYLKVDILLGKSG---MT 471

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
           + Q    +  FR G V  L++TSVAEEGLD+  C++VIR D  +T    IQSRGRAR   
Sbjct: 472 SNQQNTILDNFRQGIVNTLISTSVAEEGLDVPACSLVIRLDGIETTKTMIQSRGRARSAN 531

Query: 826 SDY 828
           S++
Sbjct: 532 SEF 534


>gi|72391252|ref|XP_845920.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175291|gb|AAX69436.1| hypothetical protein Tb927.7.2970 [Trypanosoma brucei]
 gi|70802456|gb|AAZ12361.1| hypothetical protein Tb927.7.2970 [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 824

 Score =  109 bits (273), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 257/569 (45%), Gaps = 99/569 (17%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           RPYQ ++ E+A + ++I +L TG GKT++A     +I + ++R+++K + VF+V +VPLV
Sbjct: 21  RPYQQELFEKAIRGDSIIYLPTGGGKTVVAA----AIAHYMRRKHEKRI-VFVVNRVPLV 75

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTK-QVLVMTAQILLN-ILRHSII 422
            QQA+V+    G   G     +       + W    D     +V+T  I    I+     
Sbjct: 76  AQQAKVLESVLGK--GSRVATVRGGKKSVKSWSVLVDEGCDGVVITDSIFHEWIIGSPKA 133

Query: 423 KMEAINLLILDECHHA----VKKHPYSLVMSEFYHT--------------TSKEKRPSVF 464
             E   L+++DE H+A    +KK      + E+ H                S+   P + 
Sbjct: 134 ITEDTCLVVIDEVHNATGGCLKK------IFEYIHRICPREPQRCASNDGVSEPTLPLLL 187

Query: 465 GMTASPV-------NLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVV 517
           G+TASPV       +L  +     C  +I N+  K+D+++          + VP+P  V 
Sbjct: 188 GLTASPVLSFTRSDSLNKLIDVTRC--RIVNVTEKMDNLL----------QEVPLPLTVG 235

Query: 518 VEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
           VEY  +    +    L++  VA+++                 +   K+      G +   
Sbjct: 236 VEYYLSPPEEAFLFYLQRAAVALQD-----------------NLKVKKNAHLRAGFACPV 278

Query: 578 ESDGAANLIQ--KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLS 635
            SDG  N     K++A +   GE+ ++ AY +A   L   Q   + N   +V    +Y +
Sbjct: 279 ASDGYINRCNEIKVKACSGTSGEVDRF-AYSIATFLLCVSQAFVKLN---EVSLGSAYKT 334

Query: 636 KVVSLLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGA 695
            +   L   L E   S + A++V      +EG    + E          G +   V    
Sbjct: 335 VMDDKLFKSLQE---SPESAELVVP---ILEGLMKLLRESRHKYPERDPGQDDSSV---- 384

Query: 696 AVADGKVTPKVQSLIKIL------LKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS- 748
                +V+ +VQ L+++L      ++  H E    IIF +   +   + +   ++P+LS 
Sbjct: 385 GFDPFEVSSRVQFLLQLLSWIGKHVEANHVE-VAGIIFCDTRASVFRITEAIEKIPTLSS 443

Query: 749 FVKSASLIGHNNS------QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVV 802
             K  +L+G   +      + M   Q ++ I +FR G   LLVATS+AEEGLDI QCN+V
Sbjct: 444 LYKPRALVGKGKTLVDGEEKGMTDAQQRDVIDEFRKGNTRLLVATSLAEEGLDIAQCNLV 503

Query: 803 IRFDLAKTVLAYIQSRGRARKPGSDYILM 831
           IR+D   ++ +++QSRGRAR+  + +I+ 
Sbjct: 504 IRYDSCVSLRSFVQSRGRARRRNALFIVF 532


>gi|240275432|gb|EER38946.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
          Length = 495

 Score =  108 bits (271), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 20/338 (5%)

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDA-ANHLMKWIGIQVESDPEEVGCPSRPA---CVP 1583
            + L  KT+AD+ EALIG   + GGK    +  +K + + V+SD   V   +       +P
Sbjct: 76   QALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSLP 135

Query: 1584 ESVLRSVDFHALEDALKI------KFKDRGLLVEAITHASRPS--SGVSCYQRLEFVGDA 1635
               +   D   L+ A +I       F    LL  A THAS PS  S V CYQRLEF+GD+
Sbjct: 136  SYQIVQADAGQLDLAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDS 195

Query: 1636 VLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIR 1695
            +LD +  ++L+  Y +  P  LT+ + A V+N+    V VK  LH HL + S+AL  QI 
Sbjct: 196  LLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYISNALFGQIT 255

Query: 1696 DFVKEVLEELLKPGFNSFGLGDCK-APKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLL 1754
             + +E+   + +   +          PK L D++E+  GAIF+DS     VV   FQ  L
Sbjct: 256  RYAEEIEVAVAESADSPDAWTTTSDPPKCLPDMLEAYIGAIFVDSNFSFEVVEDFFQRYL 315

Query: 1755 -----DPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVYIDGVQVGVAQN 1809
                 D  V       HP      R         Y   ++G +  V+     +   V  +
Sbjct: 316  KQYFEDMSVYDAFANKHPTTYFHNRLTIDFGCANY-CLKAGEVQMVDSTEPRIYAAVIVH 374

Query: 1810 PQKKMAQKLAARNALAVLKEKETAEAKEKGDENGKKRK 1847
              K +AQ +A+    A  K  E A AK +G  + K R+
Sbjct: 375  -DKFVAQGIASSVRYAKTKASEAALAKLEGLASFKFRE 411



 Score = 47.4 bits (111), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASCQETF----CYERAELLGDAYLKWVVSRFLFLK 1424
            LA Q+ +++ Y     ++L  A T AS    +    CY+R E LGD+ L  V   +L+  
Sbjct: 149  LAKQIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVEYLYHH 208

Query: 1425 YPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            YP +    LT  +  MVSN  L    +  GL  ++
Sbjct: 209  YPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHL 243


>gi|432867922|ref|XP_004071339.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like [Oryzias
           latipes]
          Length = 681

 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 163/554 (29%), Positives = 249/554 (44%), Gaps = 97/554 (17%)

Query: 299 MPEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           M + +   YQ +V+E+A K +N I +L TG GKT  AV + +         N K+  V L
Sbjct: 1   MADFELYKYQEEVVERALKGENIIIWLPTGGGKTRAAVYVAKRHLETTA--NAKV--VVL 56

Query: 358 VPKVPLVYQQ-AEVIREQTG--YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           V  V LV Q  ++  +   G  Y +    G   +  +  +  QR      V++ TAQIL 
Sbjct: 57  VNMVHLVDQHYSKEFKPHLGSLYNLIKVSGVSEEKDFFGKVVQR----NDVIICTAQILY 112

Query: 415 NIL------RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGM 466
           N L      +H  +++  I LLI+DECHH  K+  Y+ VM  +     K +R  P + G+
Sbjct: 113 NALIDKEEAKH--VELSDITLLIIDECHHTHKEAVYNKVMRCYMEKKLKGERQLPQILGL 170

Query: 467 TASPVN--LKGVSSQVDCAIKICNLESKLDSVVCTIKDRK-ELEKHVPMPSEV--VVEYD 521
           TASP     + +   V+  ++IC   + LDS + + K+ + EL K VP P +   +VE  
Sbjct: 171 TASPGTGGARILEDAVEHVLEIC---ANLDSAIVSTKNYEPELMKKVPRPVKTFDIVEKR 227

Query: 522 KAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMG-ARDAGAKEELRQVYGVSERTESD 580
            A  L    + LK M + + +            FM   RDA     LRQ  G  E  E+D
Sbjct: 228 HADPLG---DHLKWMMLQIHD------------FMNLPRDA----RLRQC-GTQE-YEAD 266

Query: 581 GAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSL 640
                 + +R  N  + +    CA  + Q     L ND        ++  ++Y S     
Sbjct: 267 VVILEQRGVRENNRLVAQ----CALHLRQYNDALLIND-------TLRMMDAYRS----- 310

Query: 641 LQCELVEGAVSKKDAKVVDSENGFVEG--GTNEIEEGEL-LDSHVVSGGEHVDVIIGAAV 697
                +E     K    +D  + F+ G    N++E  +L  DSH     E+ ++    +V
Sbjct: 311 -----LEEFYDSKTTTAMDGTDFFLLGLFEENQVELRKLAADSHF----ENPNMAKLESV 361

Query: 698 ADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL--SFVKSASL 755
              +  P V+S              R I+F +   +   L     +  +L  + VK+A L
Sbjct: 362 LLQQFGPSVKS--------------RGILFSKTRQSTRCLFDWVLKSRALQTAGVKAAIL 407

Query: 756 IGHNNSQEMRTFQMQ-ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAY 814
            G  N     T   Q ETI +FR G + LL++TSVAEEGLDI +CN+V+R+ L    +A 
Sbjct: 408 TGAGNGITYMTQNEQAETIRRFRQGDLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQ 467

Query: 815 IQSRGRARKPGSDY 828
            Q+ GRAR   S Y
Sbjct: 468 QQASGRARAVDSQY 481


>gi|167046034|gb|ABZ10548.1| dicer-like protein E [Placozoa sp. DMJ-2008]
          Length = 359

 Score =  108 bits (270), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 162/396 (40%), Gaps = 72/396 (18%)

Query: 1389 EALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQ 1448
            EA+T +S Q+ F  ER E LGD YL + ++    L++P     ++    + +  N  L++
Sbjct: 1    EAITLSSAQDHFNLERLEFLGDRYLNYKITLTTLLEHPSWSINEVINRMRFLTKNKKLFR 60

Query: 1449 YALSKGLQSYIQADRFAPSR-WAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
                + +  YI    F  ++ W  PG                F   ++V+E  +   + Y
Sbjct: 61   LGAGRRIPYYIVGCPFNQNKSWVPPG----------------FVINQTVSELSIAMSREY 104

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                              +++ L+ K +AD VE LIG   +  G+++    M+W+G ++ 
Sbjct: 105  ------------------THQPLTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGFEIS 146

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHA---------LEDALKIKFKDRGLLVEAITHASR 1618
               + +          + ++ S+DF A         +E  L   F++R LL+ A+TH S 
Sbjct: 147  ECLDGI----------QELIPSIDFRANLYSETANSVETILNYSFRNRSLLMLALTHKSY 196

Query: 1619 PSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
                   Y++L F+GD +L + I   L+  YT+  P     L      N  +  VA+   
Sbjct: 197  SGLESISYEKLAFLGDTLLIYQIYLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASD 256

Query: 1679 LHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK-----------------AP 1721
            L   L H S  L  QI D + + LE      F+S     C                   P
Sbjct: 257  LCKFLLHKSRELTLQI-DEIYQALEADDVQSFSSTVQSGCSYKMKTTLLLEKLSIEQFVP 315

Query: 1722 KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPM 1757
            K LGD   ++  A+FLD+        ++   LL+P+
Sbjct: 316  KELGDTFAAVVAAVFLDNYPHEDTAGRIINSLLNPI 351


>gi|167046016|gb|ABZ10539.1| dicer-like protein A [Trichoplax adhaerens]
          Length = 351

 Score =  108 bits (269), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 54/377 (14%)

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            +E   + + + +G  ++K V++  L+   P  +   LT  R+Q  S   L+  A    + 
Sbjct: 5    EEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNIP 64

Query: 1457 SYIQADRFAPSR-WAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            SYI +  F   + W  PG    +  +D    DS+L   E+++ E                
Sbjct: 65   SYIISKPFNQLKCWIPPGFTFSIRCKDDSSSDSAL--AERTIIE---------------- 106

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE-----SD 1569
                     S +   LS K++A+ + A++G       +    + +KW+G  +E     S+
Sbjct: 107  ---------SITDNFLSVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSISN 157

Query: 1570 PEEVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
              +V        + ES  +S     H  E+ L  KF +   L+ A TH+S        Y+
Sbjct: 158  GFDVWNEKITHMIEESNSQSWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGDSFNYE 217

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            +LEFVGD++L++L+ K+LF + T+    R       A++NE +  ++  +  H HL + S
Sbjct: 218  KLEFVGDSILNYLVIKYLFLA-TDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQS 275

Query: 1688 SALDRQIRDFVKEVLEELLKPG---------------FNSFGLGDCKAPKVLGDIVESIA 1732
              +   I  F K+   +LL+ G               F+     D   PK L D+ ES+A
Sbjct: 276  PFVKEMILGFEKKT-ADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLA 334

Query: 1733 GAIFLDSGRDTSVVWQV 1749
             AI+ DSG++ S VW +
Sbjct: 335  AAIYFDSGQNLSTVWNI 351


>gi|167046018|gb|ABZ10540.1| dicer-like protein A [Placozoa sp. DMJ-2008]
          Length = 351

 Score =  108 bits (269), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 96/377 (25%), Positives = 166/377 (44%), Gaps = 54/377 (14%)

Query: 1397 QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            +E   + + + +G  ++K V++  L+   P  +   LT  R+Q  S   L+  A    + 
Sbjct: 5    EEQCNFNKIKYIGKVFIKLVLAVNLYQTCPDDNSYALTMKRRQQSSEFYLFNLAAKTNIP 64

Query: 1457 SYIQADRFAPSR-WAAPG-VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDD 1514
            SYI +  F   + W  PG    +  +D    DS+L   E+++ E                
Sbjct: 65   SYIISKPFNQLKCWIPPGFTFSIRCKDDSSSDSAL--AERTIIE---------------- 106

Query: 1515 MEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE-----SD 1569
                     S +   LS K++A+ + A++G       +    + +KW+G  +E     S+
Sbjct: 107  ---------SITDNFLSVKSIAECISAIVGALLFPDNETEGLNFLKWLGFAIEPFSSISN 157

Query: 1570 PEEVGCPSRPACVPESVLRS--VDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQ 1627
              +V        + ES  +S     H  E+ L  KF +   L+ A TH+S        Y+
Sbjct: 158  GFDVWNEKITHMIQESNSQSWLEKLHKFEENLGYKFINIDYLILAFTHSSSEFGDSFNYE 217

Query: 1628 RLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS 1687
            +LEFVGD++L++L+ K+LF + T+    R       A++NE +  ++  +  H HL + S
Sbjct: 218  KLEFVGDSILNYLVIKYLFLA-TDQDITRSKFFYGIAISNEVYGLLSYAYNFH-HLFYQS 275

Query: 1688 SALDRQIRDFVKEVLEELLKPG---------------FNSFGLGDCKAPKVLGDIVESIA 1732
              +   I  F K+   +LL+ G               F+     D   PK L D+ ES+A
Sbjct: 276  PFVKEMILGFEKKT-ADLLEGGSIPRNGNKHDWVYTIFSKSIDDDFSIPKELADVFESLA 334

Query: 1733 GAIFLDSGRDTSVVWQV 1749
             AI+ DSG++ S VW +
Sbjct: 335  AAIYFDSGQNLSTVWNI 351


>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC 1015]
          Length = 1232

 Score =  108 bits (269), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 201/481 (41%), Gaps = 97/481 (20%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKI---LEALTAASCQ 1397
            F+  LP    + A   PSI   VE  ++A  L+ +++     P  +I     A+   S +
Sbjct: 796  FVDKLPSMFAQVALFTPSISHEVEVYMIAQILRQELSLRSVTPWQRIDLLAIAIRPTSIE 855

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
                +     +GDA++K++ +  LFL +   HEG L+ ++Q+ +S+  L       GL  
Sbjct: 856  HRATFRSLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGK 915

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            ++ +      RW  P V                           G +   NE        
Sbjct: 916  FLISKHLNGKRWVPPLVS--------------------------GIEPASNE-------- 941

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-DPEEVGCP 1576
                   +  R + + TLAD+ +A++G  + +GG + A      +  +++S +   +   
Sbjct: 942  -------ARQRSIGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDG 994

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV---SCYQRLEFVG 1633
            +     PE+ + S     +E+ L   F D+ L VE++TH S   +G+   + Y+RL F+G
Sbjct: 995  TYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPS--CTGLVQTTSYRRLSFLG 1052

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV---------------KHK 1678
             +VL+ ++  +L      + P R+  L++A  NN     +A+               +H 
Sbjct: 1053 ASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHN 1112

Query: 1679 LHVH-----------LRHGSSALDRQIRDFVK-----------EVLEELLKPGFNSFGLG 1716
            +H +           LR  S AL  ++ DFV+           E+ E+   P      LG
Sbjct: 1113 VHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALG 1172

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVREL 1771
            D    +VL DI++SI GA+F+DS    +    + +     PLL+  ++ +    HP   L
Sbjct: 1173 DM---RVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVPLLEHFISHQITTDHPKDTL 1229

Query: 1772 Q 1772
            Q
Sbjct: 1230 Q 1230



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 38/314 (12%)

Query: 696 AVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSAS 754
           A+   +++P  Q L+  L K  + E F  ++FV +    L L  +    P  S      +
Sbjct: 265 AIQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLIENHPLTSHLFTCGT 323

Query: 755 LIGHNNSQEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
            IG + +Q  +T            ET+ KFR G + L++ T   EEG+D+  CN V+ F+
Sbjct: 324 FIGMSTTQYSKTELGNLHDIRNQTETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFN 383

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIE---------RGNLSHATFLRNARNSEETLRKEA 857
              ++ ++IQ RGRAR+  S +I+++E         R  +     ++  +N+E    +  
Sbjct: 384 CQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIELVQKLQNAE----RRQ 439

Query: 858 IERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
           I   +L   K     +S+D        ++ TGA + +  AVG ++ +CS+LP+  Y   +
Sbjct: 440 IPANELDFDKYERISLSLD--------IDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNK 491

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCN---APFEKLEGPVCSSMRLAQQAVCLAACKKLHE 974
           P F  ER+        +   ++LP N   +          S ++ A++   L A K L++
Sbjct: 492 PLFTYERNNY----GRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKALYQ 547

Query: 975 MGAFTDMLLPDKGS 988
            G   D L+P + S
Sbjct: 548 AGLVNDYLVPTQVS 561



 Score = 55.8 bits (133), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 392 DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEF 451
           D   W       ++ V T Q+L + L H  +K+  ++LLI DE HH  K H  + +M   
Sbjct: 33  DKAIWDNALSGIKIAVSTYQVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANKIMQVH 92

Query: 452 YHTTSK---EKRPSVFGMTASPV 471
           YH   +   +  P + G+TASP+
Sbjct: 93  YHKQHQSGVQNLPKILGLTASPI 115


>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
          Length = 1379

 Score =  108 bits (269), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 201/481 (41%), Gaps = 97/481 (20%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKI---LEALTAASCQ 1397
            F+  LP    + A   PSI   VE  ++A  L+ +++     P  +I     A+   S +
Sbjct: 878  FVDKLPSMFAQVALFTPSISHEVEVYMIAQILRQELSLRSVTPWQRIDLLAIAIRPTSIE 937

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
                +     +GDA++K++ +  LFL +   HEG L+ ++Q+ +S+  L       GL  
Sbjct: 938  HRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGK 997

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            ++ +      RW  P V                           G +   NE        
Sbjct: 998  FLISKHLNGKRWVPPLVS--------------------------GIEPASNE-------- 1023

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-DPEEVGCP 1576
                   +  R + + TLAD+ +A++G  + +GG + A      +  +++S +   +   
Sbjct: 1024 -------ARQRSIGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDG 1076

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV---SCYQRLEFVG 1633
            +     PE+ + S     +E+ L   F D+ L VE++TH S   +G+   + Y+RL F+G
Sbjct: 1077 TYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPS--CTGLVQTTSYRRLSFLG 1134

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV---------------KHK 1678
             +VL+ ++  +L      + P R+  L++A  NN     +A+               +H 
Sbjct: 1135 ASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHN 1194

Query: 1679 LHVH-----------LRHGSSALDRQIRDFVK-----------EVLEELLKPGFNSFGLG 1716
            +H +           LR  S AL  ++ DFV+           E+ E+   P      LG
Sbjct: 1195 VHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALG 1254

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVREL 1771
            D    +VL DI++SI GA+F+DS    +    + +     PLL+  ++ +    HP   L
Sbjct: 1255 DM---RVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVPLLEHFISHQITTDHPKDTL 1311

Query: 1772 Q 1772
            Q
Sbjct: 1312 Q 1312



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 38/314 (12%)

Query: 696 AVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSAS 754
           A+   +++P  Q L+  L K  + E F  ++FV +    L L  +    P  S      +
Sbjct: 347 AIQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLIENHPLTSHLFTCGT 405

Query: 755 LIGHNNSQEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
            IG + +Q  +T            ET+ KFR G + L++ T   EEG+D+  CN V+ F+
Sbjct: 406 FIGMSTTQYSKTELGNLHDIRNQTETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFN 465

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIE---------RGNLSHATFLRNARNSEETLRKEA 857
              ++ ++IQ RGRAR+  S +I+++E         R  +     ++  +N+E    +  
Sbjct: 466 CQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIELVQKLQNAE----RRQ 521

Query: 858 IERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
           I   +L   K     +S+D        ++ TGA + +  AVG ++ +CS+LP+  Y   +
Sbjct: 522 IPANELDFDKYERISLSLD--------IDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNK 573

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCN---APFEKLEGPVCSSMRLAQQAVCLAACKKLHE 974
           P F  ER+        +   ++LP N   +          S ++ A++   L A K L++
Sbjct: 574 PLFTYERNNY----GRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKALYQ 629

Query: 975 MGAFTDMLLPDKGS 988
            G   D L+P + S
Sbjct: 630 AGLVNDYLVPTQVS 643



 Score = 74.3 bits (181), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 27/188 (14%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLI--------------AVLLIRSICNDLQ 346
           E + R YQL++L ++ K+N I  + TG GKT +              +   I  I  D+ 
Sbjct: 20  ELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVYDESYYVFDHMANRSNRAILRILADID 79

Query: 347 RQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVL 406
           + N       L P V L  QQ   I+  T ++     G   +  WD           ++ 
Sbjct: 80  KGNSDKFVWLLCPTVALSEQQ--YIQYATVFLPS---GAEDKAIWD-----NALSGIKIA 129

Query: 407 VMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK---EKRPSV 463
           V T Q+L + L H  +K+  ++LLI DE HH  K H  + +M   YH   +   +  P +
Sbjct: 130 VSTYQVLYDALSHGFVKLSQMSLLIFDEAHHCKKDHVANKIMQVHYHKQHQSGVQNLPKI 189

Query: 464 FGMTASPV 471
            G+TASP+
Sbjct: 190 LGLTASPI 197


>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
            Full=Endoribonuclease dcl2-2; Includes: RecName:
            Full=ATP-dependent helicase dcl2-2
          Length = 1362

 Score =  108 bits (269), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 201/481 (41%), Gaps = 97/481 (20%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKI---LEALTAASCQ 1397
            F+  LP    + A   PSI   VE  ++A  L+ +++     P  +I     A+   S +
Sbjct: 861  FVDKLPSMFAQVALFTPSISHEVEVYMIAQILRQELSLRSVTPWQRIDLLAIAIRPTSIE 920

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
                +     +GDA++K++ +  LFL +   HEG L+ ++Q+ +S+  L       GL  
Sbjct: 921  HRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGK 980

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            ++ +      RW  P V                           G +   NE        
Sbjct: 981  FLISKHLNGKRWVPPLVS--------------------------GIEPASNE-------- 1006

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-DPEEVGCP 1576
                   +  R + + TLAD+ +A++G  + +GG + A      +  +++S +   +   
Sbjct: 1007 -------ARQRSIGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDG 1059

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV---SCYQRLEFVG 1633
            +     PE+ + S     +E+ L   F D+ L VE++TH S   +G+   + Y+RL F+G
Sbjct: 1060 TYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPS--CTGLVQTTSYRRLSFLG 1117

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV---------------KHK 1678
             +VL+ ++  +L      + P R+  L++A  NN     +A+               +H 
Sbjct: 1118 ASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHN 1177

Query: 1679 LHVH-----------LRHGSSALDRQIRDFVK-----------EVLEELLKPGFNSFGLG 1716
            +H +           LR  S AL  ++ DFV+           E+ E+   P      LG
Sbjct: 1178 VHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALG 1237

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVREL 1771
            D    +VL DI++SI GA+F+DS    +    + +     PLL+  ++ +    HP   L
Sbjct: 1238 DM---RVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVPLLEHFISHQITTDHPKDTL 1294

Query: 1772 Q 1772
            Q
Sbjct: 1295 Q 1295



 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 144/314 (45%), Gaps = 38/314 (12%)

Query: 696 AVADGKVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSAS 754
           A+   +++P  Q L+  L K  + E F  ++FV +    L L  +    P  S      +
Sbjct: 330 AIQPEEISPMCQCLLDELSK-AYREGFCGLVFVTQRATVLALKWLIENHPLTSHLFTCGT 388

Query: 755 LIGHNNSQEMRT--------FQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFD 806
            IG + +Q  +T            ET+ KFR G + L++ T   EEG+D+  CN V+ F+
Sbjct: 389 FIGMSTTQYSKTELGNLHDIRNQTETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFN 448

Query: 807 LAKTVLAYIQSRGRARKPGSDYILMIE---------RGNLSHATFLRNARNSEETLRKEA 857
              ++ ++IQ RGRAR+  S +I+++E         R  +     ++  +N+E    +  
Sbjct: 449 CQLSLKSFIQRRGRARRENSQFIIIMEDESGPRYLKRLEMEEIELVQKLQNAE----RRQ 504

Query: 858 IERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILR 917
           I   +L   K     +S+D        ++ TGA + +  AVG ++ +CS+LP+  Y   +
Sbjct: 505 IPANELDFDKYERISLSLD--------IDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNK 556

Query: 918 PEFIMERHEKPGGPTEYSCKLQLPCN---APFEKLEGPVCSSMRLAQQAVCLAACKKLHE 974
           P F  ER+        +   ++LP N   +          S ++ A++   L A K L++
Sbjct: 557 PLFTYERNNY----GRFRAVVKLPSNLDPSLQSFSSSRSWSRLKYAREDAALQAYKALYQ 612

Query: 975 MGAFTDMLLPDKGS 988
            G   D L+P + S
Sbjct: 613 AGLVNDYLVPTQVS 626



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 16/174 (9%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           E + R YQL++L ++ K+N I  + TG GKT +A+L    I  D+ + N       L P 
Sbjct: 20  ELRIREYQLEMLNESLKRNLIVVMPTGTGKTQVAIL---RILADIDKGNSDKFVWLLCPT 76

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           V L  QQ   I+  T ++     G   +  WD           ++ V T Q+L + L H 
Sbjct: 77  VALSEQQ--YIQYATVFLPS---GAEDKAIWD-----NALSGIKIAVSTYQVLYDALSHG 126

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK---EKRPSVFGMTASPV 471
            +K+  ++LLI DE HH  K H  + +M   YH   +   +  P + G+TASP+
Sbjct: 127 FVKLSQMSLLIFDEAHHCKKDHVANKIMQVHYHKQHQSGVQNLPKILGLTASPI 180


>gi|71982860|ref|NP_492161.3| Protein DRH-3 [Caenorhabditis elegans]
 gi|38422755|emb|CAB02082.3| Protein DRH-3 [Caenorhabditis elegans]
          Length = 1119

 Score =  107 bits (268), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 146/580 (25%), Positives = 253/580 (43%), Gaps = 81/580 (13%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++++ A + KN +    TG+GKT +A+        +   Q K    V LVPK+PL
Sbjct: 372 RTYQEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHIEERTSQGKPSRVVLLVPKIPL 431

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL---- 417
           V QQ +   +     Y V  + G         +R   E     V VMT QIL+N+L    
Sbjct: 432 VGQQKDRFLKYCNGMYEVNGFHGSESSVSGTGRR--DEVIATHVSVMTPQILINMLQSVR 489

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLV---MSEFYHTTSKEKRPSVFGMTAS-PVNL 473
           ++  + +   +++I DE H A K HPY L+   + E+     K ++P + G+TAS  V +
Sbjct: 490 QNERLYVSDFSMMIFDEVHKAAKNHPYVLINQMVQEW-----KYEKPQIIGLTASLSVKV 544

Query: 474 KGVSSQVDCAIKICNLESKLDSVVCTIKDRK----ELEKHVPMPSEVVVEYDKAASLWSL 529
            G   +      I N+ + +++   +   R+    EL +HV  P + V            
Sbjct: 545 DGQKDENQMLNDIYNMLALINAPHLSTITRQSSIDELNEHVGKPDDSV------------ 592

Query: 530 HEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTES--DGAANLIQ 587
                  E+ +  A ++  R    +++        EEL  +   + R  +      N  +
Sbjct: 593 -------ELCL-PAKENILRDYIERYLNHAHGKFLEELASMSKSTGRNNTIPPNMINTFK 644

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSK--VVSLLQCEL 645
           K +  NY   E        + Q  L  L   E+ N Q   K+ + YL    +V L+   +
Sbjct: 645 KNQPKNY---EYYDSLLQGIIQE-LNKLNVPEKWNSQTWAKYMKVYLEARGIVDLMPAMV 700

Query: 646 VEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPK 705
               + K   K+ +S +  VE  T  I++ + L   + S                 V P+
Sbjct: 701 AFKYMEKAIGKLNESHSETVEYSTF-IKDHDTLKQTIQS-----------------VEPE 742

Query: 706 VQSLIKILL--KYQHTEDFRAIIFV------ERVVAALVLPKVFAELPSLSFVKSASLIG 757
           +   +K  L  ++    + R IIFV      +RV   L   KV  +  +        ++G
Sbjct: 743 IVLRLKNTLTNQFHVAPESRVIIFVTQRSTAQRVSDFLNESKVLDQFGNYGEQMVGYVLG 802

Query: 758 HNN--SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK-TVLAY 814
            N   + +  + + Q T+ KF +GR+ ++VATSV EEGLD+  CN++I+++ +  + +  
Sbjct: 803 TNKQGAVQQTSQEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIKYNCSSGSAIQL 862

Query: 815 IQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLR 854
           +Q RGRAR   S  +L+  + +++      NA  SE+ +R
Sbjct: 863 VQQRGRARAKNSRSVLLSVKSSINETE--TNALISEKYMR 900


>gi|317033008|ref|XP_001394728.2| hypothetical protein ANI_1_2258094 [Aspergillus niger CBS 513.88]
          Length = 889

 Score =  107 bits (267), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 112/481 (23%), Positives = 201/481 (41%), Gaps = 97/481 (20%)

Query: 1343 FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINY--PVPASKI---LEALTAASCQ 1397
            F+  LP    + A   PSI   VE  ++A  L+ +++     P  +I     A+   S +
Sbjct: 388  FVDKLPSMFAQVALFTPSISHEVEVYMIAQILRQELSLRSVTPWQRIDLLAIAIRPTSIE 447

Query: 1398 ETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQS 1457
                +     +GDA++K++ +  LFL +   HEG L+ ++Q+ +S+  L       GL  
Sbjct: 448  HRATFRLLAFIGDAFMKYLFAMQLFLHHHLWHEGLLSSLKQRNLSDAGLAHAIHQSGLGK 507

Query: 1458 YIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMED 1517
            ++ +      RW  P V                           G +   NE        
Sbjct: 508  FLISKHLNGKRWVPPLVS--------------------------GIEPASNE-------- 533

Query: 1518 GELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVES-DPEEVGCP 1576
                   +  R + + TLAD+ +A++G  + +GG + A      +  +++S +   +   
Sbjct: 534  -------ARQRSIGAATLADMTKAVVGAAFTDGGLNQAAACASVMFPKLKSWNASSLHDG 586

Query: 1577 SRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV---SCYQRLEFVG 1633
            +     PE+ + S     +E+ L   F D+ L VE++TH S   +G+   + Y+RL F+G
Sbjct: 587  TYSKTRPENAVASTAIVDMEELLGYTFTDKSLAVESMTHPS--CTGLVQTTSYRRLSFLG 644

Query: 1634 DAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAV---------------KHK 1678
             +VL+ ++  +L      + P R+  L++A  NN     +A+               +H 
Sbjct: 645  ASVLEWIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHN 704

Query: 1679 LHVH-----------LRHGSSALDRQIRDFVK-----------EVLEELLKPGFNSFGLG 1716
            +H +           LR  S AL  ++ DFV+           E+ E+   P      LG
Sbjct: 705  VHKNVTTCSIRLWDFLRLHSDALSTELSDFVQKSSEKADAIKHELWEQRFYPWVRLRALG 764

Query: 1717 DCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ-----PLLDPMVTPETLPMHPVREL 1771
            D    +VL DI++SI GA+F+DS    +    + +     PLL+  ++ +    HP   L
Sbjct: 765  DM---RVLSDIIQSIFGAVFIDSQATLASCDALAEKLGIVPLLEHFISHQITTDHPKDTL 821

Query: 1772 Q 1772
            Q
Sbjct: 822  Q 822



 Score = 42.0 bits (97), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 885 VESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCN- 943
           ++ TGA + +  AVG ++ +CS+LP+  Y   +P F  ER+        +   ++LP N 
Sbjct: 51  IDRTGAQLIMREAVGYLYNFCSKLPAQLYVSNKPLFTYERNNY----GRFRAVVKLPSNL 106

Query: 944 --APFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
             +          S ++ A++   L A K L++ G   D L+P + S
Sbjct: 107 DPSLQSFSSSRSWSRLKYAREDAALQAYKALYQAGLVNDYLVPTQVS 153


>gi|330797669|ref|XP_003286881.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
 gi|325083116|gb|EGC36577.1| hypothetical protein DICPUDRAFT_150900 [Dictyostelium purpureum]
          Length = 790

 Score =  107 bits (266), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 107/193 (55%), Gaps = 22/193 (11%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           +Q RPYQ+++ +++ K++ I  L TG GKTLI+ ++I+     ++  N     +F+V ++
Sbjct: 209 KQPRPYQIEIFKESMKQDIICCLPTGLGKTLISCMVIKR----MKELNPMKRIIFMVDRI 264

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           PLV QQ++VI E+TG  V       G  F + Q  Q  FD   VLV+   +L+N++ ++ 
Sbjct: 265 PLVQQQSKVIAEETGLQV---LAAHGDSFKNTQLSQ-SFD---VLVIIGALLINLIINNE 317

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP----------V 471
           I +    L++ DE HH VK HP+++ +  F     +  RP + G+TASP          +
Sbjct: 318 IDLNHFCLIVTDEAHHIVKGHPFAVALKHFPE-IERTNRPKLLGLTASPAGKKDFISTLI 376

Query: 472 NLKGVSSQVDCAI 484
           +LK +S    C +
Sbjct: 377 SLKVISRASHCKL 389



 Score = 82.0 bits (201), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 5/120 (4%)

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPS---LSFVKSASLIGHNNSQE--MRTFQMQETI 773
           + +FRAIIFV+   +A  L ++   + +    SF+K   ++GH +     M   + ++ I
Sbjct: 544 SSNFRAIIFVKTRKSAARLVEILNVIKNKGDFSFLKPTIVVGHGSKSNDGMSISKQKDAI 603

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE 833
            +FR  +  L+VATSV EEG D+ +CN+VIR D   TV A IQSRGR R   S +I +++
Sbjct: 604 DRFRQDKCNLIVATSVVEEGFDVPECNLVIRLDPPTTVTANIQSRGRLRSKDSYFIGIVK 663


>gi|281206201|gb|EFA80390.1| putative RNA helicase [Polysphondylium pallidum PN500]
          Length = 804

 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 14/184 (7%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQ    ++A + N I  + TG GKT IA ++I   C  +++ N K   +FLV ++P
Sbjct: 210 QPREYQKYFYKKAMEDNIICCIPTGLGKTQIAAMVI---CK-MKQMNPKKRILFLVERIP 265

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV QQ + IREQTG  V    G+M  D        +  D   VLV  + + LN+LR +  
Sbjct: 266 LVLQQEKYIREQTGLNVLGVHGDMSID-------AKLNDHHDVLVSISALFLNLLRDNKG 318

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            ME  +L++ DE HH VK H +S+++ + Y     + +P V G+TASP    G SS +D 
Sbjct: 319 VMEQYSLIVFDEAHHIVKDHSFSMLLKKHYKDMEDDVKPKVMGLTASPA---GKSSWIDT 375

Query: 483 AIKI 486
            I +
Sbjct: 376 FISL 379



 Score = 81.3 bits (199), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 13/152 (8%)

Query: 715 KYQHTEDFRAIIFVERVVAALVLPKVF---AELPSLSFVKSASLIGHNNSQE--MRTFQM 769
           K Q    F+AI+FV+   +A  L KV    A+     F+K   + GH +++     T   
Sbjct: 549 KNQTDPAFKAILFVKTRQSAEQLVKVLTTRAKEERYKFLKPGKVSGHGSTKSGGQSTASQ 608

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
           ++ + KFR G+  ++VAT+V EEGLD+ +CNVVIR D   TV AY QSRGR R   S++ 
Sbjct: 609 KDIVEKFRSGQHNVIVATAVLEEGLDVPECNVVIRIDSPATVTAYTQSRGRLRSKKSEFY 668

Query: 830 LMIE--RGNLSHATFLRNARNSEETLRKEAIE 859
            +++    N+ +A  ++     +E   KEAIE
Sbjct: 669 AILKDFESNI-YANLMK-----QEFYIKEAIE 694


>gi|346972329|gb|EGY15781.1| hypothetical protein VDAG_06945 [Verticillium dahliae VdLs.17]
          Length = 1187

 Score =  107 bits (266), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 227/578 (39%), Gaps = 123/578 (21%)

Query: 446 LVMSEFYHT--TSKEKRPSVFGMTASPV---NLKGVSSQVDCAIKICNLESKLDSVVCTI 500
           ++M  FYH    S    P V G+TASP+    L+G+ +          LE  LDSV  T 
Sbjct: 1   MIMMNFYHPRKQSALSVPHVLGLTASPIMRSRLEGLEA----------LEQTLDSVCVTP 50

Query: 501 K-DRKELEKHVPMPSEVVVEYD--------KAASLWSLHEQLKQMEVAVEEAAQSSSRRS 551
           +  R +L  HV  P+   V Y+        K  S+ SL E  + M++           R 
Sbjct: 51  RLHRDDLMTHVKRPTVCYVHYETTDAKDEPKPVSISSLREACRNMDI-----------RQ 99

Query: 552 KWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA----YKV 607
               +  RD G     R++  V    ++D    +          L +LG W A    +KV
Sbjct: 100 DPYVICLRDKGTDRARRELIKVLTSHKTDSQQQMKSFFNQSLRVLRDLGPWAAEYYIWKV 159

Query: 608 AQSFLTALQ-NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVE 666
              FL  ++  D R N Q + + ++ YL+ +  L Q  + E  VS               
Sbjct: 160 VTDFLAIIEARDHRMN-QRNTE-EKQYLANI--LRQISISEPPVS--------------- 200

Query: 667 GGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAII 726
                     +L +H  S                    KV  L++  L  + T+    II
Sbjct: 201 ----------MLSAHNTSN-------------------KVMVLME-YLSSKATDGTVGII 230

Query: 727 FVERVVAALVLPKVFAELP-------SLSFVKSAS--LIGHNNSQEM-RTFQMQETIAKF 776
           FV+    A +L  V    P       S+  V  AS  L+   +  ++ R     E + +F
Sbjct: 231 FVKERSTAAMLAHVIESHPLTQNRHSSVGVVVGASTHLVRKKDMWDLSRAAHETEPLLQF 290

Query: 777 RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
           R G + LL+ATSV EEG+D+  CN+VI FD  + + A++Q RGRARK  S  ++++   +
Sbjct: 291 RSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARKKDSSLVVLLPGTD 350

Query: 837 LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISV-------DAVPGTVYQVESTG 889
                +             E++E T  +H +   R I +       ++     Y VEST 
Sbjct: 351 HVPQDW-------------ESMEATMRTHYEREQREIQIMEQIEASESAKYEEYVVESTN 397

Query: 890 AVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKL 949
           A +   +A   +  +C QL    +   RPE+I  R    G P      + LP   P    
Sbjct: 398 ARLDFENAKAHLSNFCGQLSPGEFIDKRPEYI-PRVVDNGVPPSLRVTVLLPSYVPAAVR 456

Query: 950 EGPVCSSMRLAQQA---VCLAACKKLHEMGAFTDMLLP 984
                 S +   QA       A   L++ G   + +LP
Sbjct: 457 HAESRRSWKSEHQASKDAAFQAYVALYKAGLVNEHMLP 494



 Score = 58.2 bits (139), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 58/198 (29%)

Query: 1358 LPSIMRRVESMLLAIQLKDKI----NYPVPASKILEALTAASCQETFCYERAELLGDAYL 1413
            +P I   VE  L+A QL   +    N+  P S +L A++     E   YER ELLGD+ L
Sbjct: 750  IPFISHIVEVRLVAEQLSSSLLRDLNFSDP-SLVLAAISTKGSLEATNYERLELLGDSIL 808

Query: 1414 KWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPG 1473
            K   +          +   L      +VSN  L + AL  GL  ++  + F    W    
Sbjct: 809  KLCTT---------ANAAAL----HGLVSNSRLCRAALDAGLDKFVLTENFTCRTWR--- 852

Query: 1474 VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSK 1533
              P+                                Y +D ME G      S  R++S+K
Sbjct: 853  --PI--------------------------------YVNDMMEKG---ARDSGPRIMSTK 875

Query: 1534 TLADVVEALIGVYYVEGG 1551
            TLAD+VEALIG  Y++GG
Sbjct: 876  TLADIVEALIGAAYIDGG 893


>gi|145540581|ref|XP_001455980.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|74834199|emb|CAI44479.1| Dicer-like ribonuclease with helicase and Rnase III domains
           [Paramecium tetraurelia]
 gi|124423789|emb|CAK88583.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1797

 Score =  107 bits (266), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 111/234 (47%), Gaps = 52/234 (22%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ+D+ +++K+KN+I FLETG GKT IA++ I         QN K+  VFL   + 
Sbjct: 65  EIRDYQIDLFQKSKEKNSIIFLETGRGKTHIALMHIYYYIKKNGFQNTKL--VFLANTIQ 122

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMG---QDF----------------------------- 390
           LV QQ ++IR+Q  Y V     + G   QD+                             
Sbjct: 123 LVEQQCQLIRDQI-YSVAQEMEKKGLAPQDYHFDLQLFKDNSFKRKFIVPIHSKSILGID 181

Query: 391 -------WDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHP 443
                  W  +RW    +   VLVM  Q+LLN LR   +K+   +L+I DECHH  ++H 
Sbjct: 182 EGMDIQGWKKERWDDIINESCVLVMMGQMLLNALRRGYLKLPYFSLIIFDECHHCTQRHS 241

Query: 444 YSLVMSEFYHTTSKEK------RPSVFGMTASPVNLKGVSSQVDCAIKICNLES 491
           Y L++ EF      +K      +    G+TA+PV     S  ++ A+KI ++ S
Sbjct: 242 YRLIIKEFLECEKVKKQIQHSEKVKFLGLTATPV----TSVDIERAVKISSVPS 291



 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 190/436 (43%), Gaps = 77/436 (17%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQA 1461
            Y+  E LGDA LK + S  +F+++P  +E  L   R ++VSN  L ++++     + I+ 
Sbjct: 1324 YQVLEFLGDANLKLLSSIEVFVQFPFANEHLLHLERARIVSNENLRKFSIIHRFFNCIKC 1383

Query: 1462 DRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELE 1521
              F    ++ P  L   D++T++       Q +   E+K  T   Y +       +GE+ 
Sbjct: 1384 TNFD---YSPPEFL--LDKNTQELSEI---QPEKQKENKENTKYQYTQ-------NGEVI 1428

Query: 1522 GD-SSSYRVLSSKTLADVVEALIGVYYVEGGKD--AANHLMKWIGIQVESDPEEVGCPSR 1578
             +   +Y+ +  K  +DVVEAL G + ++  +D  A    +  IG+ ++    +V   + 
Sbjct: 1429 TELPKNYQPIPEKVHSDVVEALNGAFLIQYDEDINACQFFLHRIGV-LKYPLAQVKLKNS 1487

Query: 1579 PACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPS-------SGVSC------ 1625
                 + +L+  + ++LE+ +  KF D+ +L++AITH S  S           C      
Sbjct: 1488 TTLQAKGLLQK-NLNSLENIIGYKFNDQSILIQAITHQSFLSVLDFYNYRKCKCNFVEFQ 1546

Query: 1626 ----------------------------------YQRLEFVGDAVLDHLITKHLFFSYTN 1651
                                              Y+RLEF+GD+VLD ++ + L   +  
Sbjct: 1547 NTKNILQISNLNQNDINESLLTQLNQQQNRIDMSYERLEFLGDSVLDSVVVEWLVKEFNK 1606

Query: 1652 LPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGS----SALDRQIRDFVKEVLEELLK 1707
                 L   +   V N+  A V + +KL   L H +    +  + Q  + +K++  E   
Sbjct: 1607 EKVEDLALKKQCVVCNKALALVTLHYKLDQFLLHPTLHKVAHENHQTLNKIKQMYNEY-- 1664

Query: 1708 PGFNSFGLGDCKAP--KVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPM 1765
              ++         P  K+LGD+ ESI GAIF+DS  +  +  QV   LL P +   T P 
Sbjct: 1665 --YDDISKMYTSEPIIKILGDVFESIVGAIFVDSSFNYDLTKQVVFKLLMPFMQHFTSPN 1722

Query: 1766 HPVRELQERCQQQAEG 1781
              ++  Q+R  +  +G
Sbjct: 1723 QIIKNPQDRLFRYFKG 1738



 Score = 49.7 bits (117), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 21/236 (8%)

Query: 770 QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYI 829
           +E+I KF++    +LV+T+V EEG D+  C+ V  F    T+  +IQ  GRAR  GS + 
Sbjct: 593 KESIKKFKES-CNILVSTNVTEEGFDVPNCHYVFIFGEITTLKQFIQKIGRARAEGSVFY 651

Query: 830 LMIERGN----LSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS--VDAVPGTVY 883
            ++ +      ++    L   +   E   +E  +    S LK+    ++  ++ +P    
Sbjct: 652 FILPKEKELMWMAKEKVLFKTKECVERKIEELNKNNYYSDLKNRINSLNKQINNIPKFKE 711

Query: 884 Q------VESTGAVVSLNSAVGLIHFYCSQLPSDRY-----SILRPEFIMERHEKPGGPT 932
           +      V+ + A+V++N AV ++  Y +   +  Y     + +R  F  +  E P    
Sbjct: 712 EYYDCRLVKDSLALVNVNWAVEILSNYANIFKNFEYRGKDENYIRGIF-YQYTEFPS--L 768

Query: 933 EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGS 988
            + C L LP N       G +  +   A+++    A   L +    T+ L P K +
Sbjct: 769 GWKCVLILPKNFSDRYFIGDLMKTKEDAKRSAAFKAVLILKQKQMLTEDLRPVKSA 824


>gi|255970532|gb|ACU45742.1| dicer-like protein 1, partial [Sporothrix schenckii]
          Length = 1021

 Score =  106 bits (264), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 723 RAIIFVERVVAALVLPKVFAE----LPSLSFVKSASLIGHNNSQEM--RTFQMQE-TIAK 775
           R I+FVE+   A +L  +F +    +P+L   ++  L+G   S++M   TF+ Q  TI+K
Sbjct: 161 RCIVFVEQRYTATLLADLFQQEQMKIPNL---RTGVLVG-GGSKDMGKNTFRTQLLTISK 216

Query: 776 FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERG 835
           F+ G+V  L ATS+AEEGLDI          L  T++ YIQSRGRAR   S YI M E G
Sbjct: 217 FKRGQVNCLFATSIAEEGLDIPGLQPCHPLRLYGTMIQYIQSRGRARHQESTYIHMAELG 276

Query: 836 NLSHATFLRNARNSEETLR---KEAIERTDLSHLKDTSRLISVDAVPGTVYQVESTGAVV 892
           N+ H   L   + SE  +R       E   L    +       D     VY V ST A +
Sbjct: 277 NVDHRRLLAENKASENKMRDFCNALPENRKLEGNDNDMDYFLRDETDQQVYVVPSTQAKL 336

Query: 893 SLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEKLEGP 952
           +  S++ ++  Y S LP     + +PE+ +           + C++ LP ++P  +  G 
Sbjct: 337 TYRSSLVILAQYVSTLPEPSEGVPKPEYSVF-----CTADGFVCEVVLPSSSPIRQATGR 391

Query: 953 VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             S  ++A+ A   A C KL+E       L P
Sbjct: 392 PHSRKQVAKCAAAFAMCLKLYEKKYIDKHLHP 423



 Score = 73.2 bits (178), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 103/234 (44%), Gaps = 35/234 (14%)

Query: 1339 PELCFI-------HPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP-VPASKILEA 1390
            P  CFI        P+P   +     LP I+ R+ES L+A++    I  P +     LEA
Sbjct: 706  PSRCFIVLDTLRISPIPVDSIAMIFNLPPIIHRIESTLIALEAAAVIGLPSIYPGLALEA 765

Query: 1391 LTA-------ASCQETFC---------YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
             T        A   ET           YER ELLGD++LK   +  L+   P K+E +  
Sbjct: 766  CTKDCDVSDDAGATETAINFQAGMGRNYERLELLGDSFLKMASTIALYTLAPDKNEFEYH 825

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEK 1494
              R  M+ N  L+  AL  GL+ YI++  F  + +      PV DE  K    +     K
Sbjct: 826  VERMCMICNKNLFNNALEIGLEEYIRSKEFDRAWYP-----PVVDETVKLAAEA---AAK 877

Query: 1495 SVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYV 1548
            +   D+ G  K         ++ G  + +  SY  LS K++ADV EA+IG  Y+
Sbjct: 878  TGTPDENG--KTPTALHGLILKKGRKQQE-GSYHALSDKSIADVCEAMIGAAYL 928


>gi|146180696|ref|XP_001470932.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|146144409|gb|EDK31487.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 1822

 Score =  105 bits (263), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 50/239 (20%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ ++ + +  KN+I +LETGAGKT+IA +LI       ++  +K   +FL   V 
Sbjct: 104 EIRNYQKELFKNSYSKNSIIYLETGAGKTMIATMLINYFFQKQKKAPQKKKIIFLANTVQ 163

Query: 363 LVYQQ-AEV-------------------------------IREQTGYVV---GHYCGE-- 385
           LV QQ AE+                               I E+  ++V   G Y  +  
Sbjct: 164 LVKQQYAEIKNNLQRISEMMENDKEISQILKFQEGINYRRIFEKENHIVKCHGSYKQKDN 223

Query: 386 MGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYS 445
           +  + +  Q+W    +  ++ VM  Q+LLN LR   I++E I ++I DECHH  + HPY 
Sbjct: 224 LQIETFTKQKWDYLLENYEIFVMIGQVLLNGLRRGYIRIEDIEVIIYDECHHTRQDHPYC 283

Query: 446 LVMSEFYHTTSKEKR----PSVFGMTASPVNLKGVSSQVDCAIKI-CNLESKLDSVVCT 499
           L+  EFYH   +       P ++G+TASPV        +D  +K   N+  K  S +CT
Sbjct: 284 LIQYEFYHFHKRRNEQVQLPKIYGLTASPV--------LDIEVKSDSNIMKKKISELCT 334



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 44/273 (16%)

Query: 771  ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
            E I  FR   + ++++TSV EEG DI  CN+VI F+    + +++Q +GRARK  S +I+
Sbjct: 688  ENIEAFRKKELQIILSTSVTEEGFDIPSCNLVISFNKISNLKSFVQIKGRARKENSKFII 747

Query: 831  MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS----------VDAVPG 880
            M                 +++  +K+  E TD+   KD  + I           ++  P 
Sbjct: 748  M-----------------AKDKYQKQDYE-TDIESYKDLIQQIKEIAPKVEKQEIEIRPN 789

Query: 881  TVYQV--------ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPT 932
              Y++        + TGA+++ N +V L H Y +QL     S ++  F         G  
Sbjct: 790  YKYKIVKLTFNKNQETGAILNTNWSVNLFHTYANQLLYSYDSNIKGPFYYYIEITNVG-- 847

Query: 933  EYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEQQ 992
             + C++ +P  +  +       +    A++  C  A   L+      D +       E+ 
Sbjct: 848  -FICQIIVPSQSGLKTFCSNPQAQKEDAKKDACFQAVIILYRQYKIFDQI--QNSQSEKS 904

Query: 993  EKVDQNDEGEPLPGTARHREFYPEGVADILQGE 1025
            E + ++++ E L    +    Y +   D + GE
Sbjct: 905  ESLFEDEKDEKLTKILQK---YCKSYVDSVMGE 934



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)

Query: 1625 CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLR 1684
            C QRLEF+GDAVLD +I ++LF  + N  PG LT ++ + V N+    + +    +  + 
Sbjct: 1605 CNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKFII 1664

Query: 1685 HGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCKAP----------KVLGDIVESIAGA 1734
             GS   +++      E+  ELL      F +GD              K LGD++ES+ GA
Sbjct: 1665 -GSIQHNKE------EI--ELLLNNVEMF-MGDTSLMYDTTYNQSLIKTLGDVIESLVGA 1714

Query: 1735 IFLDSGRDTSVVWQ-VFQPLLDPMVTPETLPMHPVRELQ 1772
            IF+D+  D  +  + V + L   ++   T   H ++ LQ
Sbjct: 1715 IFIDNNLDYEITKKIVMETLFAEILQYFTGQEHRLKNLQ 1753



 Score = 49.7 bits (117), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 35/155 (22%)

Query: 1399 TFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSY 1458
              C +R E LGDA L  ++  +LF K+P    G+LT+M+  +V N  L    L KG   +
Sbjct: 1603 NLCNQRLEFLGDAVLDLIIVEYLFNKFPNSDPGELTQMKTSLVQNKTLCLINLMKGFYKF 1662

Query: 1459 IQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDG 1518
            I               +     + ++ +  L + E  + +  L  D  YN+         
Sbjct: 1663 I---------------IGSIQHNKEEIELLLNNVEMFMGDTSLMYDTTYNQ--------- 1698

Query: 1519 ELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKD 1553
                          KTL DV+E+L+G  +++   D
Sbjct: 1699 -----------SLIKTLGDVIESLVGAIFIDNNLD 1722


>gi|365902819|ref|ZP_09440642.1| ribonuclease III [Lactobacillus malefermentans KCTC 3548]
          Length = 232

 Score =  103 bits (257), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 37/249 (14%)

Query: 1594 ALEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSY 1649
            AL +   I FKD  LL EA+T AS     P+  +  Y+R+EF+GDAV+  ++++++F  Y
Sbjct: 8    ALAENFNIVFKDESLLDEALTQASYVNEHPNQNLKFYERIEFLGDAVMQFVVSEYIFKRY 67

Query: 1650 TNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPG 1709
              LP GRLT LRAA VN E+FA  A +   + ++R G                EEL    
Sbjct: 68   PQLPQGRLTRLRAAMVNEESFASFARECHFNDYIRLGKG--------------EELANAR 113

Query: 1710 FNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVW--QVFQPLLDPMVTPETLPMHP 1767
                     +   +L DI ES  GA+++D G    + +  QV  P LD     +      
Sbjct: 114  ---------ERDSLLCDIFESFVGAVYMDQGIKKVITFAEQVIYPKLDEGRFDDYFDHKT 164

Query: 1768 VRELQERCQQQA------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAAR 1821
              ELQE  Q+        + L+     +  +  V V ++ V++GV +   KK A++ AA+
Sbjct: 165  --ELQEMVQKNGPVSIDYQLLDENGPENDRVFKVAVLVNKVELGVGEAHSKKHAEQRAAK 222

Query: 1822 NALAVLKEK 1830
             AL  LK K
Sbjct: 223  VALDQLKRK 231



 Score = 57.0 bits (136), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 1389 EALTAASC------QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            EALT AS       Q    YER E LGDA +++VVS ++F +YPQ  +G+LTR+R  MV+
Sbjct: 25   EALTQASYVNEHPNQNLKFYERIEFLGDAVMQFVVSEYIFKRYPQLPQGRLTRLRAAMVN 84

Query: 1443 NLVLYQYALSKGLQSYIQ 1460
                  +A       YI+
Sbjct: 85   EESFASFARECHFNDYIR 102


>gi|169603375|ref|XP_001795109.1| hypothetical protein SNOG_04697 [Phaeosphaeria nodorum SN15]
 gi|160706381|gb|EAT88457.2| hypothetical protein SNOG_04697 [Phaeosphaeria nodorum SN15]
          Length = 1275

 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 233/555 (41%), Gaps = 100/555 (18%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ +++++    N +  L TG GKT IA     +I  +  R  K    VF+ P  PLV
Sbjct: 306 RDYQFNIVQRGLFNNLLVALPTGLGKTFIAA----TIMLNWYRWTKDSQIVFVAPTKPLV 361

Query: 365 YQQ-------AEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            QQ       A + R QT  + G     +  + W ++R         V  MT Q LLN L
Sbjct: 362 AQQIDACFHIAGIPRSQTTMLTGGVSPALRSEEWKSKR---------VFFMTPQTLLNDL 412

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGV 476
           +H     + + LL++DE H A   + Y  V+S F    ++  R  V  +TA+P  N++ V
Sbjct: 413 KHGYADPKKLVLLVVDEAHRATGAYAYVEVVS-FLRRFNQSFR--VLALTATPGANVESV 469

Query: 477 SSQVDCAIKICNLESKLDSV--VCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLK 534
              +D  + I  +E + ++   +C+    + +EKHV   S+   E +    L+S   Q  
Sbjct: 470 QKVID-GLDISRVEIRTENSMDICSYVHSRSIEKHVFQNSD---EMEMCMELYSHALQPL 525

Query: 535 QMEVAVEEAAQSSS-----------RRSKWQFMGARDA--GAKEELRQVYGVSERTESDG 581
              V    A  S +            R+KW     R A  G K  +  V+ +        
Sbjct: 526 VNTVNGLNAYWSKNPCDLTPYGCQQARNKWISEAGRHANQGVKSMVNAVFTI-------- 577

Query: 582 AANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLL 641
            A++ Q +  + Y     G    Y   + F        ++ Y+  +   ES+   +V L 
Sbjct: 578 LASISQAMDLLKYH----GMGPFYVKLKEFKKESDK-SKSKYRKQILDSESFQKLMVRL- 631

Query: 642 QCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGK 701
                +G V         +++ FV     E  +  +LD H V+ G + D + GA      
Sbjct: 632 -----QGWV---------TDDNFVGHPKLEFLQQVILD-HFVNAG-NGDNVEGA------ 669

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN-- 759
             P  Q+ I +   ++ + +   I  + +    ++ P+VF              +G +  
Sbjct: 670 --PPSQTRIMVFAHFRDSAE--EISRILKRHEPMIRPRVF--------------VGQSTG 711

Query: 760 -NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            NS+ M   +  E I +F+ G    L+ATS+ EEGLDI + +++I +D   + +  +Q  
Sbjct: 712 KNSEGMSQKEQLEAIEQFKQGTFNTLIATSIGEEGLDIGEVDLIICYDSKASPIRMLQRM 771

Query: 819 GRARKPGSDYILMIE 833
           GR  +     I+M++
Sbjct: 772 GRTGRKRQGKIVMLQ 786


>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
            NRRL 8126]
 gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
            NRRL 8126]
          Length = 1118

 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 167/692 (24%), Positives = 274/692 (39%), Gaps = 125/692 (18%)

Query: 353  LAVFLVPKVPLVYQQAEVIREQTGYVVGHYC-GEMGQDFWDAQRWQREFDTKQVLVMTAQ 411
            +A FL P V L  QQ EVIR Q   V      G    D W  +                 
Sbjct: 1    IAWFLAPTVSLAEQQFEVIRAQIPSVQSRLIRGADNVDAWSTR---------------PG 45

Query: 412  ILLNILRHSIIKMEAINLLILDEC--HHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMT 467
            +   +LR++ I + A      D C  H+ V K+  + +M E Y     +    P + G+T
Sbjct: 46   VWDAVLRNTRIVVAA------DLCVAHNPVGKNSVARLMREHYFPNKAKGLPVPHILGLT 99

Query: 468  ASPVNLKGVSSQVDCAIKICNLESKLDSVVCTI-KDRKELEKHVPMPSEVVVEYDKAASL 526
            ASP+    +    D  +    LE  LD+V  T  K R EL   V  P  +VV Y      
Sbjct: 100  ASPLMTSNLG---DLEV----LEQTLDAVCKTPSKHRDELMAQVNRPEMMVVSYGA---- 148

Query: 527  WSLHEQLKQMEVAVEEAAQSSS---RRSKWQFMGARDAGAKEELRQVYGVSERTESDGAA 583
                       + V+EAA   +    R    ++G       + L      + R E     
Sbjct: 149  -----------IPVDEAAAQPTPAMERLMKAYLGLDITRDPDILHLALNRTPRNE----- 192

Query: 584  NLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQC 643
               Q+LR +         +C  ++   +  A    +     L     + Y+ KV+S L  
Sbjct: 193  ---QRLRKL---FASRKTYCQTQMESFYRRACDMCQ----HLGPWAADYYIHKVISTL-- 240

Query: 644  ELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT 703
                         + D+++   EG +  +++   L   +   G      I  A+A     
Sbjct: 241  -------------LQDTDDSAQEGDSLTVKQRRYLVEALTPVGPGPAPQIPTALA----- 282

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELP-SLSFVKSASLIGHNNS- 761
            PKV +L+ IL +YQ       I+FV+      VL  + A  P +    +  S++G + + 
Sbjct: 283  PKVVALLGILERYQGNP--VGIVFVKERATVAVLSHILAVHPRTAGRYRVGSMVGTSATP 340

Query: 762  ---QEMRTFQMQETIAK---FRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
               Q+      +E I     FR G + LLVATSV EEG+D+  CN+VI FD  + + ++I
Sbjct: 341  GRRQDFLDLSQKEYILSLQAFRKGTINLLVATSVLEEGIDVPACNLVICFDRLENLKSFI 400

Query: 816  QSRGRARKPGSDYILMIE-RGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLIS 874
            Q RGRAR   S   L++E   + S   +L   R  +     +  E  +L  ++ +     
Sbjct: 401  QRRGRARMSASQLYLLVEDDSDKSSRIWLDLEREMKRKYEDDMRENKELEEIEKS----- 455

Query: 875  VDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEY 934
             D +   V + + TGA +++  A   +  +C+ L + ++    P +++  H+  G P + 
Sbjct: 456  -DVLDYPVLRDDKTGAQITIQDAKQHLEHFCATLSTRKFVDWSPFYVV--HDLEGNPIDA 512

Query: 935  ------SCKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLL 983
                     + LP + AP    FE +      S   A +     A  KL+E+G     LL
Sbjct: 513  RQRGLRKATVHLPVSLAPELRCFESIYA--WPSEANACKDAAFQAYAKLYEVGLVNRHLL 570

Query: 984  PDKGSGEQQE------KVDQNDEGEPLPGTAR 1009
            P + +   ++       V   D+  P P  A+
Sbjct: 571  PIRETDLVKDIETRAGVVPVRDQLNPWPAVAQ 602



 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 143/342 (41%), Gaps = 44/342 (12%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD---KINYPVPASKI 1387
            K Y   LP     +  +P         +P+I+  +E+ L+A  L +   +       S +
Sbjct: 800  KPYPRVLPASRLRVDSVPAVYAHVGLLIPAIVHALEAHLVAKDLLESRLERTGITDLSLV 859

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            + A++ ++ +    YER E LGD+ LK+  +     KY +  EG L+ ++ ++VSN  L+
Sbjct: 860  VMAISTSAARGPTDYERIEFLGDSILKFCTTINCAAKYLKYPEGCLSPLKDKIVSNSRLF 919

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+  GL  YI        +W      P + ED  +                       
Sbjct: 920  RAAVEFGLDRYIVHKTLTLHKWR-----PTYVEDLLENPPP------------------- 955

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVE 1567
                            ++  R+LS+KTLADVVEALI   Y+ GG   A   M     + E
Sbjct: 956  ----------------ATRTRMLSTKTLADVVEALIAASYISGGIPKALACMSLFLPEFE 999

Query: 1568 SDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV-SCY 1626
                E G        P      V    LE  +   F  + LLVEA+TH S    G+ +  
Sbjct: 1000 WKSIEQGREILYNEAPHDEPLPVTMRPLESLIGYTFTKKALLVEAMTHPSCTGPGIRASL 1059

Query: 1627 QRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNE 1668
             RLEF+GDA+LD+++   LF     L    L  LR A VN +
Sbjct: 1060 DRLEFLGDAILDYIVVNRLFSDPAGLDNSTLHLLRTALVNAD 1101



 Score = 56.2 bits (134), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 18/159 (11%)

Query: 1593 HALEDALKIK-----------FKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 1641
            HALE  L  K             D  L+V AI+ ++  + G + Y+R+EF+GD++L    
Sbjct: 832  HALEAHLVAKDLLESRLERTGITDLSLVVMAISTSA--ARGPTDYERIEFLGDSILKFCT 889

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            T +    Y   P G L+ L+   V+N    R AV+  L  ++ H +  L +    +V+++
Sbjct: 890  TINCAAKYLKYPEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHKWRPTYVEDL 949

Query: 1702 LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSG 1740
            LE    P   +  L      K L D+VE++  A ++  G
Sbjct: 950  LEN-PPPATRTRMLST----KTLADVVEALIAASYISGG 983


>gi|195996179|ref|XP_002107958.1| hypothetical protein TRIADDRAFT_17843 [Trichoplax adhaerens]
 gi|190588734|gb|EDV28756.1| hypothetical protein TRIADDRAFT_17843, partial [Trichoplax
           adhaerens]
          Length = 105

 Score =  102 bits (255), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/105 (48%), Positives = 71/105 (67%), Gaps = 2/105 (1%)

Query: 395 RWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHT 454
           +W+ E ++ QVLVMTA ILL IL+H  IK+  INLLI DECH AV +H Y+ +M ++ HT
Sbjct: 1   KWKEELESHQVLVMTAAILLQILQHGYIKVSHINLLIFDECHQAVGRHVYAQIMRDYVHT 60

Query: 455 TSKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCT 499
               +RP +FG+TAS ++ K   SQ++  +KI  LES + S V T
Sbjct: 61  EDAIRRPIIFGLTASVIHGKCKESQIE--LKIKQLESLMLSRVAT 103


>gi|402073770|gb|EJT69322.1| dicer-like protein 2 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 1538

 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 15/223 (6%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ + + ++N I  ++TG+GKT +AVL    I ++L+R +      FL P V L 
Sbjct: 74  RVYQLELFQASMEQNIIVSMDTGSGKTQVAVL---RIISELERTDADKRIWFLAPTVTLC 130

Query: 365 YQQAEVIREQTGYV-VGHYCGEMGQDFWDAQR-WQREFDTKQVLVMTAQILLNILRHSII 422
            QQ EV+R Q   + V    G+   D W  Q  W       +V+V T QIL + L HS +
Sbjct: 131 NQQFEVLRSQLPSIGVKILTGDDNVDSWSNQSIWDAVLFETRVVVCTYQILFDALSHSFV 190

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNLKGVSSQV 480
            ++ I+L++ DE H+ +  +    +M +FYH   +     P + G+TASPV    ++S  
Sbjct: 191 TLDTISLIVFDEAHNCLGNNSGRRMMMQFYHPRKESGLPVPHILGLTASPVMRSDITS-- 248

Query: 481 DCAIKICNLESKLDSVV-CTIKDRKELEKHVPMPSEVVVEYDK 522
                + +LE+ LD+V       R EL  +V  P   +  Y +
Sbjct: 249 -----MDSLEASLDAVCRGPTVHRDELLANVNRPLMAIDAYPR 286



 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 165/384 (42%), Gaps = 75/384 (19%)

Query: 1319 EEQEGEGEEILD--KTYYVFLPPELCFIH--PLPGSLVRGAQRLPSIMRRVESMLLAIQL 1374
            +EQ+G  +   D  + Y   +P   C +    L  ++ +    +PSI   +E+ ++A +L
Sbjct: 946  QEQQGSDQPPKDNKRPYPRIVPASDCIVDDDSLTMTMAQFGMLIPSITNAMENYMVAEEL 1005

Query: 1375 KDKINYPVPASK----ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF---LKYPQ 1427
                       K    ++ AL+A S Q    YER E LGD+ LK   S       L+YP 
Sbjct: 1006 LRTTPLGTLGFKDVALVVTALSAPSSQNVTNYERIEFLGDSILKLCASITCAANNLEYP- 1064

Query: 1428 KHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDS 1487
              EG L+ ++ ++VSN  L + A+  GL  +I   +     W                  
Sbjct: 1065 --EGYLSLVKDRIVSNSRLCRAAVKFGLDRFIITKQHTLRGW------------------ 1104

Query: 1488 SLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYY 1547
                  K V +                ME         + R LS+KTLADVVEALIG   
Sbjct: 1105 ------KRVLQA---------------ME---------AQRDLSTKTLADVVEALIGAAL 1134

Query: 1548 VEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLR-SVDFHALEDALKIKFKDR 1606
            +EGG D A   +       E    ++G        P+SV +  V    +E  L   F+++
Sbjct: 1135 IEGGMDKALRCISLFLPDEEWRSLDLGRQILYQAAPKSVKKLPVTMRPVEGLLGYTFRNK 1194

Query: 1607 GLLVEAITHASR--PSSGVSCYQRLEFVGDAVLDHLITKHLF-------FSYTNLPPGRL 1657
             LLVEA+TH+S   P S   C +RLEF+GD++LD ++ + LF             PP   
Sbjct: 1195 ALLVEALTHSSYSVPGSETGCLERLEFLGDSILDSVVVEKLFAIGGGDGDGDNGRPPLAH 1254

Query: 1658 TD---LRAAAVNNENFARVAVKHK 1678
            TD   LR A VN +  A + ++ +
Sbjct: 1255 TDMHLLRTAMVNGDFLAFLTMEWR 1278



 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 147/327 (44%), Gaps = 45/327 (13%)

Query: 704  PKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLS-FVKSASLIGHN-NS 761
            PK+Q+L+ +L  +Q       I+FV+    A VL  +  E P ++   K   ++G + N+
Sbjct: 421  PKLQALLTVLASHQGNP--VGIVFVKERATAAVLSSLLQEFPMINERYKVGYMVGTSRNA 478

Query: 762  QEMRTF---------QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVL 812
               R F         +    +  FR GR+ LLVATSV EEG+D+  CN+V+ FD    + 
Sbjct: 479  ARKRDFYDLSPMEDGKGASALDNFRSGRINLLVATSVLEEGIDVPVCNLVVCFDRPANLK 538

Query: 813  AYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIER-----TDLSHLK 867
            ++IQ RGRAR   S   L++E G        R   +  E L KE   R      +L HLK
Sbjct: 539  SFIQRRGRARMRSSQLHLLLEEGE-------RLVAHDWEALEKEMKRRYEDEMRELDHLK 591

Query: 868  ----DTSRLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIME 923
                + +   ++D  P    +   T A +++  A G +  +C  + S  +    PE+++ 
Sbjct: 592  QLEDEEAENTTMDG-PLAPLRARDTAAEITIKDAKGHLDHFCRVIGSRMFVDPSPEYLIN 650

Query: 924  RHEKPGGPTEYSCKLQLPCNAPFEKLEGPVCSSMRLAQQAVC----LAACKKLHEMGAFT 979
                    +E    + LP + P  KL     S   ++Q+  C    L A K L++ G   
Sbjct: 651  ETS-----SEIHATVLLPVSLPL-KLRRISSSRGWMSQKNACKDAALQAYKMLYDAGLLN 704

Query: 980  DMLLPDKGSGEQQEKVDQNDEGEPLPG 1006
              LLP +     +E V  N + E  PG
Sbjct: 705  QHLLPIR-----EEVVAANRDVEGRPG 726



 Score = 49.3 bits (116), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 21/164 (12%)

Query: 1582 VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLI 1641
            V E +LR+     L       FKD  L+V A++  S  S  V+ Y+R+EF+GD++L    
Sbjct: 1001 VAEELLRTTPLGTL------GFKDVALVVTALSAPS--SQNVTNYERIEFLGDSILKLCA 1052

Query: 1642 TKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEV 1701
            +     +    P G L+ ++   V+N    R AVK             LDR I    K+ 
Sbjct: 1053 SITCAANNLEYPEGYLSLVKDRIVSNSRLCRAAVKF-----------GLDRFI--ITKQH 1099

Query: 1702 LEELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV 1745
                 K    +       + K L D+VE++ GA  ++ G D ++
Sbjct: 1100 TLRGWKRVLQAMEAQRDLSTKTLADVVEALIGAALIEGGMDKAL 1143


>gi|258567594|ref|XP_002584541.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237905987|gb|EEP80388.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 217

 Score =  102 bits (253), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 22/141 (15%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL++ E+AK  N IA L+TG      +                          V LV
Sbjct: 98  REYQLELFEKAKTNNIIAVLDTGITIAFFSPCFF----------------------VTLV 135

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
           +QQA V++ Q    +  +CG M    WD + W +      V+V TA++L   L HS +KM
Sbjct: 136 FQQAAVLQNQIDQKIDKFCGAMETHLWDGETWAKHLANNMVIVCTAEVLHQCLLHSFVKM 195

Query: 425 EAINLLILDECHHAVKKHPYS 445
           E INLLI DE HHA K HPY+
Sbjct: 196 ENINLLIFDEAHHAKKDHPYA 216


>gi|334310595|ref|XP_003339511.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M protein-like
           [Monodelphis domestica]
          Length = 2027

 Score =  101 bits (252), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 229/552 (41%), Gaps = 83/552 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL + E A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 106 VRDYQLRISEAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 161

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E      G   GH     G  Q F   + W +    K+VL +T Q+++N L    
Sbjct: 162 VAQQIEACSRVMGIPQGHMAEMTGSTQAFIRKEIWHK----KRVLFLTPQVMMNDLSRGA 217

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
                I  L++DE H A+  + Y  V+ E    T   K   +  ++A+P N      QV 
Sbjct: 218 CPAVKIKCLVIDEAHKALGNYAYCQVVRELVKYT---KHFRILALSATPGNDTKAVQQVV 274

Query: 482 CAIKICNLE--SKLDSVVCTIKDRKELEKHVPMPSE--VVVEYDKAASLWSLHEQLKQME 537
             + I  +E  S+  S +      + +EK V    E  V ++      L +   +L ++ 
Sbjct: 275 SNLLIGQIELRSEDSSDILPFTHERRIEKLVVSLGEELVTIQNTYIQILETFASRLIRVN 334

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
           V +    Q     +K+Q + ARD   K+    + G        G   +I+   AI  +L 
Sbjct: 335 VLMR---QDIPNLTKFQIILARDLFRKKLSSHILG--------GQQGIIEGDFAICISL- 382

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
               +  Y++ Q      Q   R+ Y                +  C +++G  S    + 
Sbjct: 383 ----YHGYELLQ------QMGMRSLY----------------IFLCGIMDGTKSMTRTRN 416

Query: 658 VDSEN-GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY 716
             S N  F+E    E+      D H    G +    I +        PK++ L ++++++
Sbjct: 417 ELSRNEQFME--LFELLGKMFSDRHPNQIGPNDKKFIYSH-------PKLKKLEEVVVEH 467

Query: 717 ------QHTE----DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRT 766
                 Q+T     D R +IF     +   + ++  + P    V+  + +GH + +  + 
Sbjct: 468 FRTWKDQNTSEKKCDTRVMIFSSFRDSVQEIAEMLQKQPE---VRVMTFVGHASGKSTKG 524

Query: 767 FQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA-- 821
              +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR   
Sbjct: 525 LTQKEQLEVVKRFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPVRLVQRMGRTGR 584

Query: 822 RKPGSDYILMIE 833
           ++ G   I++ E
Sbjct: 585 KREGRIVIILTE 596


>gi|347525654|ref|YP_004832402.1| ribonuclease III [Lactobacillus ruminis ATCC 27782]
 gi|345284613|gb|AEN78466.1| ribonuclease III [Lactobacillus ruminis ATCC 27782]
          Length = 230

 Score =  101 bits (251), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 118/247 (47%), Gaps = 37/247 (14%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D   I  K+  L  EA THAS     P   +  Y+R+EF+GDAV+   ++++LF  Y 
Sbjct: 9    LKDDYGINVKNAELFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLFKRYP 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
            +LP G+L+ LRAA V  ++F++ A +     ++R G        R+              
Sbjct: 69   SLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKANARN-------------- 114

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV--VWQVFQPLLDPMVTPETLPMHPV 1768
                      P +L DI ES  GA++LD G+D  V  +  V  P LD M   + L  H  
Sbjct: 115  ---------RPSLLCDIFESFIGALYLDQGKDKVVEFISAVVFPKLD-MGWFDHLLDHKT 164

Query: 1769 RELQERCQQQAE-GLEY-----KASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
             ELQE  QQ  +  +EY     K   +    T+ VY DG ++G      KK A++ AA  
Sbjct: 165  -ELQEYLQQNGDCKIEYKMLDEKGPDNDKTYTMAVYADGKKIGEGVGSSKKNAEQAAAYQ 223

Query: 1823 ALAVLKE 1829
            AL V K+
Sbjct: 224  ALKVAKQ 230



 Score = 50.4 bits (119), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 7/98 (7%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLF 1422
            L  +LKD     V  +++  EA T AS       +    YER E LGDA ++  VS +LF
Sbjct: 5    LTKKLKDDYGINVKNAELFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLF 64

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             +YP   EG+L+R+R  MV      ++A       YI+
Sbjct: 65   KRYPSLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIR 102


>gi|226497706|ref|NP_001145700.1| uncharacterized protein LOC100279204 [Zea mays]
 gi|219884081|gb|ACL52415.1| unknown [Zea mays]
          Length = 270

 Score =  101 bits (251), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAIKI 486
           ++L+I DECHHA   HPY+ +M EFYH +  E +P+VFGMTASP+  KGVSS +DC  ++
Sbjct: 2   VSLMIFDECHHATGNHPYTRIMKEFYHGS--EHKPNVFGMTASPIIRKGVSSDLDCKNQL 59

Query: 487 CNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYD-KAASLWSLHEQLKQMEVAVEEAAQ 545
             LE+ LDS + ++ DR+E+E  VP   EV   Y+ +  S   L E+L+ +    +    
Sbjct: 60  SELENILDSKIHSVVDREEIELCVPSAKEVNRYYEPRTVSFDDLSEELEILCSKYDGLII 119

Query: 546 SSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA 604
               RS  Q+  A D   KE  ++               L   L  I Y L + G  CA
Sbjct: 120 QLHNRSTNQYKDA-DEITKESRKR---------------LSNSLAKICYCLEDAGLLCA 162


>gi|345306292|ref|XP_003428451.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group M
           protein-like, partial [Ornithorhynchus anatinus]
          Length = 2081

 Score =  100 bits (249), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 217/549 (39%), Gaps = 71/549 (12%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQL + E A  +NT+  L TG GKTL+A +LI     +  R       VFL P  PLV
Sbjct: 27  RSYQLRMAEAALFRNTLVCLPTGLGKTLVAAVLIY----NFYRWFPAGKVVFLAPTKPLV 82

Query: 365 YQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
            QQ             H     G  Q     + W     +K+VL +T Q+++N L     
Sbjct: 83  AQQRLACARLMAIPARHMALLTGSTQALTRKEIWT----SKRVLFLTPQVMVNDLSRGTC 138

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
               +  L++DE H A+  H Y  V+ E    T+  +   V  ++A+P +      QV  
Sbjct: 139 PAVTVKCLVVDEAHRALGNHAYCQVVRELTKYTTHFR---VLALSATPGSDTKSVQQVVS 195

Query: 483 AIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEVVVEYDKAAS-LWSLHEQLKQMEV 538
            + I  +E + +    ++    +R+  +  VP+  ++    D     L +    L +M V
Sbjct: 196 NLLIGQIELRSEDSPDIIPYSHERRVEKLVVPLGEDLAAIQDAYIQVLEAFASPLIRMNV 255

Query: 539 AVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGE 598
                 +  S  +K+Q + ARD   K     V G+ +    +G   L   L      L +
Sbjct: 256 LTR---RDISNLTKYQIVLARDQFRKNPSPNVVGIQQGV-VEGQLALCISLYHGFELLQQ 311

Query: 599 LGQWCAYKVAQSFLTALQNDERANYQLD--------VKFQESYLSKVVSLLQCELVEGA- 649
           +G    Y   +  +   +   R+  +L          K  E       +     +  GA 
Sbjct: 312 MGLRSFYMFLRGIMDGTKGLARSRNELGRNGDFMKLYKLLEGMFPDSRTPTGSNVGIGAT 371

Query: 650 -VSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVS--GGEHVDVIIGAAVADGKVTPKV 706
            +  +D K+  S     +     +E       H VS  G +   V+I ++  D      V
Sbjct: 372 RIGHEDQKIFYSHPKLKKLEEVVVEHFRTWKDHRVSENGCDSTRVMIFSSFRDS-----V 426

Query: 707 QSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRT 766
           Q +  +L  +QH    RA+ FV                            GH + + ++ 
Sbjct: 427 QEIADML--HQHHPVIRAMSFV----------------------------GHASGKNVKG 456

Query: 767 FQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
           F  +   E + +FRDG    LV+T V EEGLDI + ++++ FD  K+ +  +Q  GR  +
Sbjct: 457 FTQKEQLEVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGR 516

Query: 824 PGSDYILMI 832
                I++I
Sbjct: 517 KRQGRIVVI 525


>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1406

 Score =  100 bits (248), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 184/488 (37%), Gaps = 134/488 (27%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD---KINYPVPASKI 1387
            K Y   +P     +  +P         LP++   V   L+A  L D   +         +
Sbjct: 855  KPYPRVIPASQVKVDKIPTVFAHVGLMLPALTAAVGDYLVARDLLDGSLQTTGITGLDLV 914

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLY 1447
            + A+TA+  + +  YER E LGD+ LK+  +           +  L+  + ++VSN  L 
Sbjct: 915  VTAITASGARRSIDYERIEFLGDSILKFCTT------INCSAQCFLSASKDKIVSNYRLC 968

Query: 1448 QYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNY 1507
            + A+  GL  YI    +   +W      PVF ED                         Y
Sbjct: 969  KAAIDFGLARYIINTAYTTDKWR-----PVFVED-------------------------Y 998

Query: 1508 NEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLM-------K 1560
             E  D+   DG         R +S+KTLADVVEALIG  ++ GG + A   +       K
Sbjct: 999  LERTDNPSSDG------PKTREMSTKTLADVVEALIGASHISGGINKALACISLFLPEAK 1052

Query: 1561 WIGI----QVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHA 1616
            W  I    QV  D      P  P           + H LE  +   FK + LL+EA+TH 
Sbjct: 1053 WQSIDHGRQVLYDEAPDDEPLPP-----------NMHLLEKLIGYTFKKKSLLIEAMTH- 1100

Query: 1617 SRPSSGV----SCYQRLEFVGDAVLDHLITKHLFF---SYTNLP--PGRLTDLRAAAVNN 1667
              PS  V    +   RLEF+GDA+LD+L+ + LF      T LP    +L  LR A VN 
Sbjct: 1101 --PSFNVQDTRASLDRLEFLGDAILDYLVVESLFSLREPLTGLPLENSKLHLLRTALVNA 1158

Query: 1668 E-----------------------------------------------NFARVAVKHKLH 1680
            +                                               N      K  L 
Sbjct: 1159 DILGFLVMEWAIEEERYNAEVILPDPTSNPYLSPSRRTSSSSTTPPEINLISTTAKFPLW 1218

Query: 1681 VHLRHGSSALDRQI------RDFVKEVLEELLKPG--FNSFGLGDCKAPKVLGDIVESIA 1732
              LR+ S  +   I        F+++ +   L  G  +    L   +A K  GD+ ES+ 
Sbjct: 1219 SFLRYTSPEMGEHILSTQSRHSFLRDEIRHALDRGEKYPWPALTRLQAQKFYGDVFESLM 1278

Query: 1733 GAIFLDSG 1740
            GA+++DSG
Sbjct: 1279 GAVWVDSG 1286



 Score = 84.3 bits (207), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 38/307 (12%)

Query: 705 KVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSL-------SFVKSASLIG 757
           KVQ+L++IL    H  +   I+FV       VL  V +  P L       S V ++ L G
Sbjct: 344 KVQALLQILAS--HKGNPVGIVFVTERATTSVLSHVLSVHPVLESRYSVESMVGTSKLPG 401

Query: 758 HNNS-QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
             +S  ++ T +  E++ +FR G+V LLVATSV EEG+D+  CN+VI FD    + ++IQ
Sbjct: 402 GKHSFLDLTTKEDIESLHRFRKGKVNLLVATSVLEEGIDVPVCNLVICFDKPSNLKSFIQ 461

Query: 817 SRGRARKPGSDYILMI---ERGNLSHATFLRN--ARNSEETLRKEA-IERTDLSHLKDTS 870
            RGRAR   S+  ++    +  +L     L     R  E+ LR+ A +E+ + S   D  
Sbjct: 462 RRGRARMNESELWVLFKDDQDQSLEEWKELEQEMKRKYEDELREIAGLEQMEQSEADDYP 521

Query: 871 RLISVDAVPGTVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGG 930
           ++              +TGA ++++ A   +  +CS L + ++    P +I+  H+  G 
Sbjct: 522 KMTD-----------PTTGAQMTIHDAKQHLDHFCSTLSTRKFVNWAPFYII--HDLEGN 568

Query: 931 PTE--------YSCKLQLPCNAPFEKLEG-PVCSSMRLAQQAVCLAACKKLHEMGAFTDM 981
           P +         +  L +  +    + E      S   A +     A KKL+E G     
Sbjct: 569 PIDARKPGLRAATVNLPVSLSPSLRRAESLRAWPSEAFACKDAAFQAYKKLYEAGLIDKN 628

Query: 982 LLPDKGS 988
           +LP + +
Sbjct: 629 MLPARTT 635



 Score = 83.2 bits (204), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 35/287 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           AR YQ+++ +++ ++N I  ++TG+GKT +  +L   I  +L R  K  L  FL P V L
Sbjct: 6   ARAYQVEMFQESLQRNIIVAMDTGSGKTQVRAIL--RIQEELGRSPK--LIWFLAPTVQL 61

Query: 364 VYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQR--WQREFDTKQVLVMTAQILLN-ILRH 419
             QQ EVI +Q   V   + CG      W  +   WQ      +++V T QIL +  + H
Sbjct: 62  AAQQFEVIEKQIPGVQSRFICGADNVQAWKYKTGVWQAVLTNVRIVVSTYQILFDAAVAH 121

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPV---NLKGV 476
           + + +E+I+LL++DE         +SL +S    T   +  P + G+TASP+   NL G+
Sbjct: 122 AFVPLESISLLVIDEGE-------FSLSIS---LTMEGKPVPHILGLTASPLMRSNLAGI 171

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHV----PMPSEVVVEYDKAASLWSLHEQ 532
            +       IC    +    +    +R E++  +    P P         ++++  L + 
Sbjct: 172 ETLEQTLDAICRTPCRHRDELMAQVNRPEMKAFIYGDLPEPQNAT---PSSSNMTRLIDT 228

Query: 533 LKQMEVAVE-------EAAQSSSRRSKWQFMGARDAGAKEELRQVYG 572
           L+QM++  +       E     SR +    + +R+  ++++++ ++ 
Sbjct: 229 LRQMDITADPHIIRLREENTERSREALKSAIMSRNTQSQKQMKALFA 275


>gi|395504025|ref|XP_003756361.1| PREDICTED: Fanconi anemia group M protein, partial [Sarcophilus
           harrisii]
          Length = 1871

 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 228/551 (41%), Gaps = 76/551 (13%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL + E A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 105 VRDYQLRISEAALSCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 160

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E      G    H     G  Q F   + W      K+VL +T Q+++N L    
Sbjct: 161 VAQQIEACSRVMGIPQRHMAEMTGSTQAFARKEIWH----NKRVLFLTPQVMINDLSRGA 216

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
                I  L++DE H A+  + Y  V+ E    T   K   +  ++A+P +      QV 
Sbjct: 217 CPAVKIKCLVIDEAHKALGNYAYCQVVRELVKYT---KHFRILALSATPGSDTKAVQQVV 273

Query: 482 CAIKICNLE--SKLDSVVCTIKDRKELEKH-VPMPSEVV-VEYDKAASLWSLHEQLKQME 537
             + I  +E  S+  S +      + +EK  VP+  E+V V+      L +   +L ++ 
Sbjct: 274 SNLLIGQIELRSEDSSDILPFTHERRIEKIVVPLGEELVTVQNTYIQVLEAFASRLMRVN 333

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL- 596
           V + +   +    +K+Q + ARD   K       G        G   +I+   AI  +L 
Sbjct: 334 VLMRKDIPN---LTKFQIILARDLFRKNSSPHTLG--------GQQGIIEGDFAICISLY 382

Query: 597 --GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
              EL Q    +    FL  + +  +      +   ++ LS+    +  EL E       
Sbjct: 383 HGYELLQQMGMRSLYIFLCGIMDGTKG-----MTRTKNELSRNEQFM--ELFEQL----- 430

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
                  N F +  T      E++D + +  G +    I +        PK++ L ++++
Sbjct: 431 ------GNMFSDRNTT----SEIVDGNPIQRGHNDKKFIYSH-------PKLKKLEEVVV 473

Query: 715 KYQHTE----------DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEM 764
           ++  T           D R +IF     +   + ++    P+   V+  + +GH + +  
Sbjct: 474 EHFRTWKDQNSTEKKCDTRVMIFSSFRDSVQEIAEMLHHQPT---VRVMTFVGHASGKST 530

Query: 765 RTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
           +    +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR 
Sbjct: 531 KGLTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPVRLVQRMGRT 590

Query: 822 RKPGSDYILMI 832
            +     I++I
Sbjct: 591 GRKRQGRIVVI 601


>gi|312127786|ref|YP_003992660.1| ribonuclease iii [Caldicellulosiruptor hydrothermalis 108]
 gi|311777805|gb|ADQ07291.1| ribonuclease III [Caldicellulosiruptor hydrothermalis 108]
          Length = 222

 Score = 99.8 bits (247), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 126/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL  KFKD+ LL  A+TH S   S  +CY+RLEF+GDA L+ +++K+LF ++ +L  
Sbjct: 4    IEKALGYKFKDKNLLRLALTHKSATHSNKNCYERLEFLGDAALELVVSKYLFVNFPDLSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  + VA K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSEVAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D++E+I GAIF++SG D    ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILADVLEAIFGAIFIESGFDKLEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E +E K  +S      E++++G +V       KK AQ+ AA   
Sbjct: 160  EIVQREGKKKIVYKDCEIIEKKYFKS------ELFVEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 54.3 bits (129), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+ VVS++LF+ +P   EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELVVSKYLFVNFPDLSEGELTNIRAAVVCSQTLSEVAEKLNLKNHI 92


>gi|405958476|gb|EKC24603.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
          Length = 1198

 Score = 99.8 bits (247), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 122/221 (55%), Gaps = 9/221 (4%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ+++ + A + KN I    TG+GKT +A+ +I++     +R N   +A FLV +  L
Sbjct: 505 RSYQMELAQAALQDKNCIIVAPTGSGKTHVAMKIIQNHREKRRRLNIPKVA-FLVEQSAL 563

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
             QQ +V +E  G  V    GE  Q     Q        K VLV+TAQIL+N L    I+
Sbjct: 564 AEQQGKVCKEYLGCKVKVITGE-KQRTESLQSLSCWIQKKDVLVITAQILVNALATGDIQ 622

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNLKGVSSQV 480
           +EA +L++ DECHH+  KHPY+ +M+ +     ++K    P + G+TAS V +    ++ 
Sbjct: 623 IEAFSLIVFDECHHSHAKHPYNQIMAYYLDLKLEDKHKQLPQIVGLTAS-VGVGKAKNEE 681

Query: 481 DCAIKICNLESKLDS-VVCTIKDRK-ELEKHVPMPSEVVVE 519
                I ++ + +D+  +C +++ K EL +HV +P + VV+
Sbjct: 682 KAMDWIFSMMANMDAEELCVVEENKAELAQHVNIPDQDVVK 722



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 4/138 (2%)

Query: 703  TPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG---H 758
             PK+  L +++L+ + +  D R IIFV        + +   E   L  +K     G    
Sbjct: 866  NPKLMELRRLILQAFGNDADSRGIIFVRTRDLVKAIHRWMMETDDLRHLKPVMFTGAQAK 925

Query: 759  NNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +++  M   Q  + ++ F++GR  +++ATSVAEEGLDI++CN+VIR+      +A +Q+R
Sbjct: 926  SSAGGMTKVQQIDALSLFKEGRHKIVIATSVAEEGLDIQKCNLVIRYSYVSNEIAMVQAR 985

Query: 819  GRARKPGSDYILMIERGN 836
            GR R+    Y ++ E+G+
Sbjct: 986  GRGRRENGKYFVVAEQGD 1003


>gi|312622598|ref|YP_004024211.1| ribonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203065|gb|ADQ46392.1| ribonuclease III [Caldicellulosiruptor kronotskyensis 2002]
          Length = 222

 Score = 99.8 bits (247), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL  KFKD+ LL  A+TH S   S  +CY+RLEF+GDA L+  ++K+LF  +  L  
Sbjct: 4    IEKALGYKFKDKNLLRLALTHKSATHSNKNCYERLEFLGDAALELAVSKYLFVHFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  +++A K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D+VE+I GAIF++SG +    ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILADVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E +E K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EFVQKEGQKKIVYKDYEIIEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + EKE
Sbjct: 214  LLEMGEKE 221



 Score = 53.1 bits (126), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+  VS++LF+ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELAVSKYLFVHFPELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHI 92


>gi|344995859|ref|YP_004798202.1| ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
 gi|343964078|gb|AEM73225.1| Ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
          Length = 222

 Score = 99.4 bits (246), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL   FKD+ LL  A+TH S   S  +CY+RLEF+GDA L+  ++K+LF  +  L  
Sbjct: 4    IERALGYTFKDKNLLRLALTHKSATHSNKNCYERLEFLGDAALELAVSKYLFVHFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  ++VA K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D++E+I GAIF++SG D    ++  + +P +   VT +    +  + LQ
Sbjct: 105  ----ENKSILADVLEAIFGAIFIESGFDIVEKIIVNLLKPYIQKAVTGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E +E K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EIVQREGNKKIVYKDCEIIEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 53.5 bits (127), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+  VS++LF+ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELAVSKYLFVHFPELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHI 92


>gi|403277961|ref|XP_003930608.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 2047

 Score = 99.4 bits (246), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 230/551 (41%), Gaps = 70/551 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL++   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLNISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAQMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKFTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEVV-VEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+V ++      L +    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELVAIQKTYIQILEAFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +    +  S  +K+Q + ARD   K     + G+ +    +G   +   L      L
Sbjct: 319 NVLMR---RDISNLTKYQIILARDQFRKNPSPNIVGIQQGI-IEGEFAICISLYHGYELL 374

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQL--DVKFQESY--LSKVVSLLQCELVEG--AV 650
            ++G    Y      +   +   R+  +L  +  F + Y  L  + +  +     G  A+
Sbjct: 375 QQMGMRSLYFFLCGIMDGTKGMTRSKNELSRNEDFMKLYKHLEGMFAHTRSTSANGISAI 434

Query: 651 SKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEH--VDVIIGAAVADGKVTPKVQS 708
            + D K V       +     IE  +  ++   SG +H    V+I ++  D      VQ 
Sbjct: 435 QQGDKKFVYGHPKLKKLEEVVIEHFKSWNAENTSGKKHDETRVMIFSSFRDS-----VQE 489

Query: 709 LIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQ 768
           + ++L ++Q T   R + FV                            GH + +  + F 
Sbjct: 490 IAEMLSQHQPT--IRVMTFV----------------------------GHASGKSTKGFT 519

Query: 769 MQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA-RKP 824
            +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR  RK 
Sbjct: 520 QKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKR 579

Query: 825 GSDYILMIERG 835
               ++++  G
Sbjct: 580 QGRIVVILSEG 590


>gi|312135000|ref|YP_004002338.1| ribonuclease iii [Caldicellulosiruptor owensensis OL]
 gi|311775051|gb|ADQ04538.1| ribonuclease III [Caldicellulosiruptor owensensis OL]
          Length = 222

 Score = 99.0 bits (245), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL  KF+D+ LL  A+TH S   S  +CY+RLEF+GDA L+  ++K+L+  +  L  
Sbjct: 4    IEKALGYKFEDKNLLRLALTHKSATHSNKNCYERLEFLGDAALELAVSKYLYVYFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  ++VA K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGK-----------REKMEKFY-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D++E++ GAIF++SG DT   ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILADVLEALFGAIFIESGFDTVEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E LE K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EIVQREGQKKIVYKDCEILEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 51.2 bits (121), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+  VS++L++ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELAVSKYLYVYFPELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHI 92


>gi|390354545|ref|XP_788029.3| PREDICTED: probable ATP-dependent RNA helicase DDX58-like
           [Strongylocentrotus purpuratus]
          Length = 608

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 195/437 (44%), Gaps = 44/437 (10%)

Query: 405 VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRP--S 462
           V+V+TAQIL++ L    +    I +++ DECH   K+  Y+ +M+++     K K+P   
Sbjct: 10  VVVLTAQILVDALTKGQVSFNQIGIIVFDECHETKKESQYNAIMAKYMEQKLKNKKPLPQ 69

Query: 463 VFGMTAS--PVNLKGVSSQVDCAIKICNLESKLDSV-VCTIKDRKELEKHVPMPSEVVVE 519
           + GMTAS    N +   +     +K+C   + +D V + T+K  KE  + V    E  + 
Sbjct: 70  ILGMTASLGVGNARSDKNAFQYMLKMC---ANMDVVKLSTVKKHKESLEKVVNKPEEGLH 126

Query: 520 YDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTES 579
              + +  S  E+++ +   V +   SS+  S             E+L      S RT +
Sbjct: 127 VVTSRTEDSFAEEIQDLMYQVFKYINSSTGSSVLN-------TTVEKLS-----SLRTSN 174

Query: 580 DGAANLIQKLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVS 639
               N    L  +   + E  Q    ++    +T  Q  ++  Y   +   E+  +K   
Sbjct: 175 HSRENFSHVLCKLKKEIAENSQSSDLQLG--LMTCAQYLKK--YSSALAIHETARTK--D 228

Query: 640 LLQCELVEGAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVAD 699
            LQC  ++  + +K +K V +    +   T + ++ EL             + +     +
Sbjct: 229 ALQC--LQEFIKEKSSKAVTTNTEKILIRTFQEKQQEL-----------EKISMSPKSPN 275

Query: 700 GKVTPKVQSLIKILLKYQHTED----FRAIIFVERVVAALVLPKVFAELPSLSFVKSASL 755
                ++Q+LI+  +    T++    FRAI+F + + +   L K   E  SL  +    L
Sbjct: 276 NPALDELQNLIERDIVTCRTQENNGPFRAILFTQTIASTWALQKWVMETDSLKDLHPEVL 335

Query: 756 IGHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI 815
           +G  N   M      + +  FR+G   LL+ATSV ++G+DI  CN V R++     +A I
Sbjct: 336 VGCRNPG-MNLRHQTDVLDNFRNGVHKLLIATSVIQQGIDIPACNFVYRYNYITDAVARI 394

Query: 816 QSRGRARKPGSDYILMI 832
           Q+RGR RKPG  + L++
Sbjct: 395 QARGRTRKPGGRFDLVV 411


>gi|323340721|ref|ZP_08080973.1| ribonuclease III [Lactobacillus ruminis ATCC 25644]
 gi|417974281|ref|ZP_12615102.1| ribonuclease III [Lactobacillus ruminis ATCC 25644]
 gi|323091844|gb|EFZ34464.1| ribonuclease III [Lactobacillus ruminis ATCC 25644]
 gi|346329278|gb|EGX97576.1| ribonuclease III [Lactobacillus ruminis ATCC 25644]
          Length = 230

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 37/247 (14%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D   I  K+  L  EA THAS     P   +  Y+R+EF+GDAV+   ++++LF  Y 
Sbjct: 9    LKDDYGINVKNTDLFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLFKRYP 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
            +LP G+L+ LRAA V  ++F++ A +     ++R G        R+              
Sbjct: 69   SLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKADARN-------------- 114

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV--VWQVFQPLLDPMVTPETLPMHPV 1768
                        +L DI ES  GA++LD G+D  V  +  V  P LD M   + L  H  
Sbjct: 115  ---------RSSLLCDIFESFIGALYLDQGKDKVVEFISAVVFPKLD-MGWFDHLLDHKT 164

Query: 1769 RELQERCQQQAE-GLEY-----KASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
             ELQE  QQ  +  +EY     K   +    T+ VY DG ++G      KK A++ AA  
Sbjct: 165  -ELQEYLQQNGDCKIEYKMLDEKGPDNDKTYTMAVYADGKKIGEGVGSSKKNAEQAAAYQ 223

Query: 1823 ALAVLKE 1829
            AL V K+
Sbjct: 224  ALKVAKQ 230



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLF 1422
            L  +LKD     V  + +  EA T AS       +    YER E LGDA ++  VS +LF
Sbjct: 5    LTKKLKDDYGINVKNTDLFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLF 64

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             +YP   EG+L+R+R  MV      ++A       YI+
Sbjct: 65   KRYPSLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIR 102


>gi|302412697|ref|XP_003004181.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261356757|gb|EEY19185.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 1240

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 199/507 (39%), Gaps = 128/507 (25%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKI----NYPVPASK 1386
            K Y    P     I  +P         +PSI   VE  L+A QL   +    N+  P S 
Sbjct: 723  KPYARVYPAPWAKIDTIPLDHAYFGALIPSISHIVEVRLVAEQLSSSLLRDLNFSDP-SL 781

Query: 1387 ILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVL 1446
            +L A++     E   YER E LGD+ LK   +    +     H          +VSN  L
Sbjct: 782  VLTAISTKGSLEATNYERLEFLGDSILKLCTT----VNAAALH---------GLVSNSRL 828

Query: 1447 YQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKN 1506
             + AL  GL  ++  + F    W      P+                             
Sbjct: 829  CRAALDAGLDKFVLTENFTCRTWR-----PI----------------------------- 854

Query: 1507 YNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV 1566
               Y +  +E G      S  R +S+KTLADVVEALIG  Y++GG      L K IG  +
Sbjct: 855  ---YVNGMLETG---ARDSGPREISTKTLADVVEALIGAAYIDGG------LAKAIGC-I 901

Query: 1567 ESDPEEVGCPSRPAC-------VPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRP 1619
                 E+     PAC        P  V        LE+ +   F  + LL+E+ITHAS  
Sbjct: 902  SIFLRELEWKLLPACQEILHSLAPPDVSLPPMLVPLEELIDYTFTKKILLIESITHASFT 961

Query: 1620 SSGVS-CYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHK 1678
            +  V+ C +RLEF+GDA+LD ++  HLF    NL   R+  L+ A+VN +    +A++  
Sbjct: 962  AGHVNGCLERLEFLGDAILDDIVVSHLF--PLNLSHDRMHLLKTASVNGDLLGFLALESH 1019

Query: 1679 -------LHVHLRHGSSALDRQ---------------------IRDFVKEVLEELLKPG- 1709
                   + V+     + L+ Q                     +R    EV+++  K   
Sbjct: 1020 AEEDEVIIDVNFSPSDTDLNPQNPAGMEQKLKRTRRKIPLWKFMRHSSIEVVQQQTKAAG 1079

Query: 1710 ---------FNSFG---------LGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQ 1751
                      ++ G         L      K L D+VE++ GA+++DSG D     +V +
Sbjct: 1080 AHADLRGQIIHALGHGSSYPWSLLARLHPAKFLSDMVEAVLGAVWVDSG-DMRACVRVTE 1138

Query: 1752 -----PLLDPMVTPETLPMHPVRELQE 1773
                 P+L  +   +   +HP  EL E
Sbjct: 1139 RLGILPVLSRLAKDDVHVLHPKSELGE 1165



 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 143/579 (24%), Positives = 225/579 (38%), Gaps = 125/579 (21%)

Query: 446 LVMSEFYHTTSKEKR--PSVFGMTASPV---NLKGVSSQVDCAIKICNLESKLDSVVCTI 500
           ++M  FYH   +     P V G+TASP+    L+G+ +          LE  LDSV  T 
Sbjct: 1   MIMMNFYHPRKQSALWVPHVLGLTASPIMRSRLEGLEA----------LERTLDSVCVTP 50

Query: 501 K-DRKELEKHVPMPSEVVVEYDKA--------ASLWSLHEQLKQMEVAVEEAAQSSSRRS 551
           +  R +L  HV  P+   V Y+           S+ SL E  + M++           R 
Sbjct: 51  RLHRDDLMTHVKRPTVSYVHYETTDAKGGPTPVSILSLREACRNMDI-----------RQ 99

Query: 552 KWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQWCA----YKV 607
               +  RD G     R++  V    E+     +          L +LG W A    +KV
Sbjct: 100 DPFILHLRDKGTDRARRELIKVLTSHETYSQQQMKSFFNQSLRVLRDLGPWAAEYYIWKV 159

Query: 608 AQSFLTALQ-NDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSENGFVE 666
              FL   + +D R N Q   + ++ YL+ +  L Q  + E  VS       ++ N F+ 
Sbjct: 160 ISDFLAITEASDHRMN-QWKTE-EKQYLANI--LRQISISEPQVSMLSTH--NTSNKFM- 212

Query: 667 GGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKYQHTEDFRAII 726
                     +L  H+ S                                  T+    II
Sbjct: 213 ----------MLIEHMSSKA--------------------------------TDGTAGII 230

Query: 727 FVERVVAALVLPKVFAELPSLSFVKSAS--LIGHNN----SQEM----RTFQMQETIAKF 776
           FV+    A +L  V    P    + S+   ++G +N     ++M    R     E + +F
Sbjct: 231 FVKERSTAAMLAHVIESHPLTPNMYSSVGVVVGTSNHLVRKKDMWDLSRAAHETEPLLQF 290

Query: 777 RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIE-RG 835
           R G + LL+ATSV EEG+D+  CN+VI FD  + + A++Q RGRARK  S  ++++   G
Sbjct: 291 RSGHLNLLIATSVLEEGIDVPACNLVICFDEPENLKAFVQRRGRARKKDSSLVVLLPGTG 350

Query: 836 NLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI----SVDAVPGTVYQ---VEST 888
           ++                  E++E T  +H +   R I     ++A   T Y+   VEST
Sbjct: 351 HVPQDW--------------ESMEATMRTHYEKERREIRIMEQIEASESTEYEEYIVEST 396

Query: 889 GAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFEK 948
            A +   +A   +  +C QL    +   RPE+I  R      P      + LP   P   
Sbjct: 397 NARLDFENAKAHLSHFCGQLSPGEFIDKRPEYI-PRVVDDEEPPSLRVTVLLPSYIPAAV 455

Query: 949 LEGPVCSSMRLAQQA---VCLAACKKLHEMGAFTDMLLP 984
                  S +   QA       A   L++ G   + +LP
Sbjct: 456 RHAESRRSWKSEHQASKDAAFQAYLALYDAGLVNEHMLP 494


>gi|198428257|ref|XP_002120168.1| PREDICTED: similar to Ddx58 protein [Ciona intestinalis]
          Length = 926

 Score = 98.6 bits (244), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 107/214 (50%), Gaps = 14/214 (6%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQL++ EQA +  N++    TG GKTL+A    + IC +  R+N     VFLVP+V L
Sbjct: 262 RNYQLELAEQALQGNNSLIVAPTGTGKTLVA----QHICTEHLRRNPNSKIVFLVPRVVL 317

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ +    Q  Y  G  C    ++  +A          ++  MT QIL N L      
Sbjct: 318 VEQQHDAFDSQMKYEQGMLCKISSENTTNAAP-NFLIMGHKITFMTPQILFNYLEKDCDF 376

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK----EKRPSVFGMTASPVNLKGVSSQ 479
           +  + LLI DECHHA+K  PY+ +M  ++   +K    +  P V GMTASP  + G  S 
Sbjct: 377 INELGLLIYDECHHAMKGDPYNSIMKVYHDNLTKYNGAKPLPQVIGMTASP-GVGGAKSV 435

Query: 480 VDCAIKICNLESKLD---SVVCTIKDRKELEKHV 510
                 I  L + L+   + V  I+++KEL KH 
Sbjct: 436 QAATQHIKRLLANLNVTTAPVEVIENKKELGKHT 469



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 702 VTPKVQSLIKILL-KYQHTEDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGHN 759
            +P ++ L +IL  ++    + + IIFV  R +A  ++  +  +   L   +   +    
Sbjct: 610 TSPILRKLFEILTAEFVDFPESKCIIFVRTRCIAKALVTCLMEDFYDLKPKQLTGVGASA 669

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
               M   + ++TI+ FRDG   ++VATSVAEEG DI  CN+VI ++ +   + ++Q +G
Sbjct: 670 GDGGMTRVEQEDTISSFRDGSTKIIVATSVAEEGFDIPACNLVIAYNYSTNEIGHVQRQG 729

Query: 820 RARKPGSDYILMIERGN 836
           R R   S   L+   G+
Sbjct: 730 RGRAKESKMFLLAYEGS 746


>gi|302872013|ref|YP_003840649.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
 gi|302574872|gb|ADL42663.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
          Length = 222

 Score = 98.2 bits (243), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL  KF+D+ LL  A+TH S   S  +CY+RLEF+GDA L+  ++K+L+  +  L  
Sbjct: 4    IEKALGYKFEDKNLLKLALTHKSATHSNKNCYERLEFLGDAALELAVSKYLYVYFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  ++VA K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D++E++ GAIF++SG DT   ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILADVLEALFGAIFIESGFDTVEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E LE K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EIVQREGQKKIVYKDCEILEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 51.2 bits (121), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+  VS++L++ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELAVSKYLYVYFPELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHI 92


>gi|405969612|gb|EKC34573.1| Putative ATP-dependent RNA helicase DDX58 [Crassostrea gigas]
          Length = 902

 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 124/243 (51%), Gaps = 31/243 (12%)

Query: 296 KEKMPEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           KE  P    R YQL++ E A   +NTI   ETG GKT +A+ L +     L  +N   + 
Sbjct: 212 KETFPTLTMRNYQLELAEIALSGRNTIICAETGTGKTYVALYLTQ---QHLASKNDACV- 267

Query: 355 VFLVPKVPLVYQQAEVI-REQTGYVVGHY----CGEMGQDFWDAQRWQREFDTKQVLVMT 409
           VFL     LV QQ E   R    Y V H        MG+    A+      +  QVL MT
Sbjct: 268 VFLARTNALVEQQYEKFSRFLYKYKVYHLKTDKTAAMGRKLAMAK------ENHQVLFMT 321

Query: 410 AQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGM 466
            QILLN +    I ++ ++LLILDECHH  K+ PY+ VM ++ H     K+   P V G+
Sbjct: 322 PQILLNNINSKQISLQEVSLLILDECHHTRKREPYNNVMKQYLHLKRDSKKTSLPQVLGL 381

Query: 467 TASPVNLKGVSSQVDCAIK-ICNLESKLDSV-VCTIKDRKE--------LEKHVPMPSEV 516
           TA+ + + G SS +D A+  I ++ + LD + +  +K+ KE        +EK   +P ++
Sbjct: 382 TAT-IGV-GKSSTLDGAVSHILSVCASLDVLDISMVKNNKEELEKTKKLMEKEKDLPKQI 439

Query: 517 VVE 519
           ++E
Sbjct: 440 ILE 442



 Score = 60.1 bits (144), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 5/107 (4%)

Query: 720 EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQMQETIAKFRDG 779
           +D + +IFVE    A  L K   E   +   ++A   G      M   +  +T+ K+R G
Sbjct: 598 DDVKGMIFVETRATAFALAKYITEELKMMGYRAAPFTG-----SMLEEEKTDTLKKYRKG 652

Query: 780 RVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            + LLVATSV  EG+D+   N +I ++        +Q  GRAR+ GS
Sbjct: 653 EINLLVATSVGSEGIDVPDSNFIITYNYTGNEADIMQMSGRARRQGS 699


>gi|393238282|gb|EJD45820.1| hypothetical protein AURDEDRAFT_124545 [Auricularia delicata
           TFB-10046 SS5]
          Length = 1121

 Score = 98.2 bits (243), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 28/222 (12%)

Query: 271 HNRAGKEANGINQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKKKNTIAFLETGAGK 330
           H   G  +  ++      VG  ++  E  PEE        +L ++ K+N    LE+G+G+
Sbjct: 249 HKLRGMMSPAVSSMAKSSVGTPADYSE--PEE--------MLNESLKRNITIVLESGSGE 298

Query: 331 TLIAVLLIR----------------SICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQ 374
           T IAVL +R                + C    R    +  ++   +V L  QQ  ++  +
Sbjct: 299 THIAVLRLRLEVERQAALGTNKASWTSCPPCARPLTPLRPLWTQWQVALCQQQHRLLERE 358

Query: 375 TGYVVGHYCGEMGQDFW-DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEA-INLLIL 432
               VG   G +  D W  A  W++     QV+V T Q+LL+ LRH+ + +   + LLI 
Sbjct: 359 LPCSVGFISGALQPDKWTSAGVWKQVVSINQVVVSTPQVLLDALRHAYMDLGLDVGLLIF 418

Query: 433 DECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLK 474
           DE HHA++ HPY+ +M EFY       +  + G+TASP+N++
Sbjct: 419 DEAHHALRGHPYNRIMREFYDPLEAADKQFIMGLTASPLNVE 460



 Score = 89.0 bits (219), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 131/296 (44%), Gaps = 44/296 (14%)

Query: 722 FRAIIFVERVVAALVLPKV-FAELPSLSFVKSASLIGHNNSQEMRTFQ----------MQ 770
           +  IIFV    A+L+L KV FA   +        L+G +N +  R              +
Sbjct: 632 YSGIIFVTLRTASLLLSKVIFAHPKTRDAFHVGYLMGWSNDERRRNVPELLVGGNDKAQE 691

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           ET+    DGR+  L+A SV EEGLD+ +CN  IRF+    +  ++QSRGRAR   S +++
Sbjct: 692 ETLKDCADGRLNWLIAPSVLEEGLDVARCNCAIRFNPGNNITGWVQSRGRARARRSSFVV 751

Query: 831 MIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGT----VYQVE 886
           M          F       E  L+  A+ER   +  K+  R  +V A P       ++VE
Sbjct: 752 M----------FSTMQDGQEHMLKCTALEREMNAKYKEAMRKRAVGAPPREERRHYFKVE 801

Query: 887 STGAVVSLNSAVGLIHFYCSQLPSDRYS-------ILRPEFIMERHEKPG----GPTE-- 933
            TGA+++LN+    I  +C +LP   Y+       I  P+  ME    PG     P E  
Sbjct: 802 QTGALLTLNNPTAHISHFCDKLPHSAYARMVPIYDIFPPDGFMEP-LAPGQALPAPKEES 860

Query: 934 --YSCKLQL--PCNAPFEKLEGP-VCSSMRLAQQAVCLAACKKLHEMGAFTDMLLP 984
             + C L L    +    K   P V  S + A++ V    C+KL   G     LLP
Sbjct: 861 KLFGCTLMLLNVVSPALRKHVTPMVHPSEKAAKRQVAFDVCQKLFNAGLVNPNLLP 916



 Score = 44.3 bits (103), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 30/48 (62%)

Query: 1513 DDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMK 1560
            D   +G L     +   LS+K LADVVE+LIGV +  GG DAA H+++
Sbjct: 1038 DPPPEGPLSNQHENVPRLSTKVLADVVESLIGVAHENGGYDAAVHMLR 1085


>gi|397615349|gb|EJK63376.1| hypothetical protein THAOC_15968 [Thalassiosira oceanica]
          Length = 1692

 Score = 98.2 bits (243), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 32/223 (14%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-------------- 346
           E   R YQ+ +LE+ K+ N I  L TG GKT+I+++LIR   +  Q              
Sbjct: 276 EGSLRNYQVHLLEKCKRSNVIVHLATGMGKTMISIMLIRDYLSKRQAASDTAPASTIETT 335

Query: 347 ----------RQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRW 396
                     R   K   +FLVP + L  Q ++ +R      V   C           R 
Sbjct: 336 LASGQEGLVSRVYSKRQILFLVPSIALCVQHSDTLRANLNCTVATACHTSSH----TARS 391

Query: 397 QREFDTKQVLVMTAQILLNILRH--SIIKMEAINLLILDECHHA-VKKHPYSLVMSEFYH 453
           + E     V+V T     ++L+H   ++ +  ++L+++DE H+A  K H Y+ +M  FYH
Sbjct: 392 RDEISRSDVIVATHGTAKDLLQHYPDVLALSNLDLMVIDEAHYAGTKDHNYATIMKLFYH 451

Query: 454 TTSKEKRPSVFGMTASP-VNLKGVSSQVDCAIKICNLESKLDS 495
           T     RP V G+TASP +N K   +     +K+  LE  LDS
Sbjct: 452 TLPVGLRPHVLGLTASPLINAKVSDTAERLQVKLGELERTLDS 494



 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 206/545 (37%), Gaps = 123/545 (22%)

Query: 1250 YVESIRYEMTAESSFPRKEGYLGPLEYSSYADYYKQKYGVELIFKKQPLIRGRGVSYCKN 1309
            Y  S+ Y +   S    ++G+    EY+S+  Y+ +KYGV  +     L         K 
Sbjct: 1121 YNPSVSYIVYGPSGNLCRDGFPN-TEYTSFLHYFSEKYGVTTLCPTSKLF------VAKR 1173

Query: 1310 LLSPRFEHSEEQEGEGEEILDKTYYVFLPPELCFIHPLPG-SLVRGAQRLPSIMRRVESM 1368
            +      HS    G  EE +     + LP E+C   P+   S+V  +  LP  +  VE  
Sbjct: 1174 VWDMPHSHSVLGPGAAEEDVAHAANLELPAEVCQESPMADPSIVLQSTLLPQFLYLVERR 1233

Query: 1369 LLAIQLKDKI--NYPV---------PASKILEALTAASCQETFCYERAELLGDAYLKWVV 1417
            L A         NY V         P S ++E LT  +C+    YER E LGDA LK V 
Sbjct: 1234 LTAEAFIRHCQENYEVLGECLSRAGPDS-VMEVLTTKTCRMPQDYERLEWLGDAVLKLVQ 1292

Query: 1418 SRFLFLKYPQK---HEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGV 1474
            +  L L+Y      HEG L  +R  M SN  L + A   G   +I               
Sbjct: 1293 TDSL-LQYSDTSYLHEGYLHMLRSVMGSNERLERVAEECGFNHFI--------------- 1336

Query: 1475 LPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGELEGDSSSYRVL---- 1530
                                      L    N  E+    ++    + D SS + L    
Sbjct: 1337 --------------------------LSCPLNREEWRPSRLQ--LRKHDDSSTKALPPTP 1368

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEEVGCPSRPACVPESVLRSV 1590
            S K  ADVVEA++G+ +V+ G   +  +   IG+                 V    L   
Sbjct: 1369 SGKVCADVVEAILGLIFVQFGFAKSVEVSLEIGLTF---------------VNADKLSRR 1413

Query: 1591 DF-HALED-----ALKIKF-----KDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1639
            DF  ALED     A    F      D  LL EA+TH S  S     YQ LE+ GDA +  
Sbjct: 1414 DFWSALEDDGELLAFATNFTGQPISDPRLLHEAVTHPSCVSKPCRSYQTLEWAGDAAVCL 1473

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
                 LF     L    L  L +   +N++ A +        HL      +D ++ +   
Sbjct: 1474 AARNWLFHKKEKLSVPTLVVLESTLTSNQSLAYIG-------HLNGVQRIIDHRMSEL-- 1524

Query: 1700 EVLEELLKPG-FNSF------GLGDCKAPKVLGDIVESIAGAIFLDSGRDTS--VVWQVF 1750
                    PG F S+      GL     PKV+ D+VES+ GA+ +D G +        V 
Sbjct: 1525 --------PGRFESYKFQLRRGLWATDPPKVIPDVVESLIGAVHVDQGVEAGQEAAAYVL 1576

Query: 1751 QPLLD 1755
            +PLLD
Sbjct: 1577 RPLLD 1581



 Score = 79.0 bits (193), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 50/324 (15%)

Query: 703 TPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVF----------AELPSLSFVKS 752
           T K+ +L+ +L+     +D   ++FVER + A+ L   F           ++ S S V++
Sbjct: 613 TEKMSTLVGLLVDLLKHDDPVGVVFVERRITAIALSHYFNQNKPLDHLGVDIRSDSLVRN 672

Query: 753 ASLI------GHNNSQEM-------RTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQC 799
           AS I        ++ Q++       +T +++  I K R     +L+ATSV EEG+D+  C
Sbjct: 673 ASKIFKYLSNSSSHDQQVVDQDFLHQTKRIRSVINKLRTRETNVLIATSVVEEGVDVEAC 732

Query: 800 NVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
           + +I FD  KT+ +YIQ +GRAR+  + +  ++++   S    L +A+ +E+ +      
Sbjct: 733 SFIISFDRMKTIKSYIQMKGRARQKQASFYTLVDKCE-SQILDLPDAQKTEKRIHDFVAS 791

Query: 860 RTDLSHLKDTSRLISVDAVPGTVYQVESTGAV-----------VSLNSAVGLIHFYCSQL 908
                +L    R    +A   + Y  E   A+             L SA  L++ Y   +
Sbjct: 792 SQTAINLSQPLR-DPANAYFDSPYSTEEEAAMHRGKYSTRISFADLQSAKSLLNRYSMSV 850

Query: 909 PSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPCNAPFE--------KLEGPVCSSMRLA 960
           P D  S    E  M  H       E S  L LP + P E        +L G    + +  
Sbjct: 851 PIDPSSRSSKE-AMTLHMPCYQERENS--LSLPSHLPPEFRIVSLPRELRG---QNAKRK 904

Query: 961 QQAVCLAACKKLHEMGAFTDMLLP 984
              + LA+  +LH++G   D LLP
Sbjct: 905 MNLLALASIVRLHKLGLLNDRLLP 928


>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
 gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
          Length = 1227

 Score = 98.2 bits (243), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 146/345 (42%), Gaps = 52/345 (15%)

Query: 1331 KTYYVFLPPELCFIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKD---KINYPVPASKI 1387
            K Y   LP +   +  +P    +    +P+I   +E  L+A  L +   +       S I
Sbjct: 890  KPYPRILPADQVRVDKVPAIYAQIGMMIPAITHALEVHLVAKDLLESRLEQTGITDLSLI 949

Query: 1388 LEALTAASCQETFCYERAELLGDAYLKWVVS---RFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            + A+TA++ +    YER E LGD+ LK+  +      +LK+P   EG L+ ++ ++VSN 
Sbjct: 950  VTAITASAARGPTDYERIEFLGDSILKFCTTINCSATYLKFP---EGCLSPLKDKIVSNS 1006

Query: 1445 VLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDKLGTD 1504
             L++ A+  GL  YI    F   +W      P + ED       L +   S  E      
Sbjct: 1007 RLFRAAVDFGLDRYIIHKAFTLHKWR-----PTYVED-------LIENPPSATET----- 1049

Query: 1505 KNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGI 1564
                                   R +S+K +ADVVEALIG  +V GG   A   M     
Sbjct: 1050 -----------------------RRISTKIIADVVEALIGTAFVSGGISKALACMSLFLP 1086

Query: 1565 QVESDPEEVGCPSRPACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGV- 1623
             V  +  E G        P+          LE  +   F  + LLVEA+TH S    G+ 
Sbjct: 1087 DVAWNSIEYGREVMYNEAPDDEPLPRTMRQLESLVGYTFTKKALLVEAMTHPSCNGPGIR 1146

Query: 1624 SCYQRLEFVGDAVLDHLITKHLFFSYTNLP--PGRLTDLRAAAVN 1666
            +   RLEF+GDA+LD+++   LF      P     L  LR A VN
Sbjct: 1147 ASLDRLEFLGDAILDYVVVNKLFAISDPAPLENSSLHLLRTALVN 1191



 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 167/684 (24%), Positives = 279/684 (40%), Gaps = 118/684 (17%)

Query: 356  FLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            FL P V L  QQ E IR Q   V       +G D  DA  W     + Q  V  A +LLN
Sbjct: 98   FLAPTVSLAEQQFEAIRAQIPGVQSKLI--LGSDSVDA--W-----STQPGVWDA-VLLN 147

Query: 416  ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKE--KRPSVFGMTASPVNL 473
                 I ++  I        H+A  ++P + +M E Y  +  E    P + G+TASP+  
Sbjct: 148  T---PIPQLTLI-------AHNAKGRNPIARLMKEHYVPSKAEGLPVPHILGLTASPLMR 197

Query: 474  KGVSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQL 533
              +S   D  +    LE  LD+V  T    ++         E++ + ++     + +  +
Sbjct: 198  SNLS---DLEV----LEQTLDAVCKTPSKHRD---------ELMAQVNRPEMKVTAYGSM 241

Query: 534  KQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAIN 593
               E   E     +  +S +  +  R       L     ++++T    A      L    
Sbjct: 242  INPETDTEPTPTMAKLKSAYLELDIRQDPYVRHL-----LTDKTPRGRARLKKVLLTKQT 296

Query: 594  YALGELGQWC--AYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
            Y   ++  +C  A+ + +S          A+Y         Y+ +V+S         A  
Sbjct: 297  YCRSQMEAFCRGAFDICKSC-----GPWAADY---------YIHRVIS---------AFV 333

Query: 652  KKDAKVVDSENGFVEGGTNE-IEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
            K  A V         G TNE + E E    ++V     VD      +    ++PKVQ+L+
Sbjct: 334  KDPAPVA-------PGHTNENLAEQE--RKYLVEAFLKVDAQAPPEIPT-TLSPKVQALL 383

Query: 711  KILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSF-VKSASLIGHNN----SQEMR 765
              L    H E+   I+FV       VL  + A  P  S   +  S++G +      Q+  
Sbjct: 384  GAL--ESHQENPFGIVFVRERATVAVLSHILAVHPKTSHRYRVGSMVGTSRVPGRRQDFL 441

Query: 766  TFQMQE---TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR 822
                +E   ++  FR G + LLVATSV EEG+D+  CN+VI FD    + ++IQ RGRAR
Sbjct: 442  DLSQKEYLLSLLSFRKGTINLLVATSVLEEGIDVPACNLVICFDKPDNLKSFIQRRGRAR 501

Query: 823  KPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDAVPGTV 882
               S   L++E      +   R  +N E+ ++++  +      +++  RL  ++ +    
Sbjct: 502  MSASRLYLLVEDEADGSS---RGWQNLEQEMKRKYED-----DMRENQRLEEIENIEDMD 553

Query: 883  YQV---ESTGAVVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHE----KPGGPTEYS 935
            Y V   + TGA +++  A   +  +C+ L + ++    P +++   E     P  P    
Sbjct: 554  YPVLRSQETGAQITILDAKSHLEHFCATLSTRKFVDWSPFYVVHDLEGNPVDPHQPGLRK 613

Query: 936  CKLQLPCN-AP----FEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGE 990
              + LP + AP    F+ L+    +S   A +     A  KL+E+G     LLP +    
Sbjct: 614  ATVHLPVSLAPELRCFQSLQA--WTSEANACKDAAFQAYAKLYEVGLVNHNLLPIR---- 667

Query: 991  QQEKVDQNDEGEPLPGTARHREFY 1014
               + D   + EP  G A  RE +
Sbjct: 668  ---ETDLIKDVEPRVGMATVREQF 688



 Score = 58.9 bits (141), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 11/140 (7%)

Query: 1603 FKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRA 1662
              D  L+V AIT ++  + G + Y+R+EF+GD++L    T +   +Y   P G L+ L+ 
Sbjct: 943  ITDLSLIVTAITASA--ARGPTDYERIEFLGDSILKFCTTINCSATYLKFPEGCLSPLKD 1000

Query: 1663 AAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK--A 1720
              V+N    R AV   L  ++ H +  L +    +V++++E       N     + +  +
Sbjct: 1001 KIVSNSRLFRAAVDFGLDRYIIHKAFTLHKWRPTYVEDLIE-------NPPSATETRRIS 1053

Query: 1721 PKVLGDIVESIAGAIFLDSG 1740
             K++ D+VE++ G  F+  G
Sbjct: 1054 TKIIADVVEALIGTAFVSGG 1073


>gi|335996787|ref|ZP_08562704.1| ribonuclease III [Lactobacillus ruminis SPM0211]
 gi|335351857|gb|EGM53348.1| ribonuclease III [Lactobacillus ruminis SPM0211]
          Length = 230

 Score = 97.8 bits (242), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 116/247 (46%), Gaps = 37/247 (14%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D   I  K+  L  EA THAS     P   +  Y+R+EF+GDAV+   ++++LF  Y 
Sbjct: 9    LKDDYGINVKNTDLFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLFKRYP 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
            + P G+L+ LRAA V  ++F++ A +     ++R G        R+              
Sbjct: 69   SFPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKADARN-------------- 114

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV--VWQVFQPLLDPMVTPETLPMHPV 1768
                        +L DI ES  GA++LD G+D  V  +  V  P LD M   + L  H  
Sbjct: 115  ---------RSSLLCDIFESFIGALYLDQGKDKVVEFISAVVFPKLD-MGWFDHLLDHKT 164

Query: 1769 RELQERCQQQAE-GLEY-----KASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
             ELQE  QQ  +  +EY     K   +    T+ VY DG ++G      KK A++ AA  
Sbjct: 165  -ELQEYLQQNGDCKIEYKMLDEKGPDNDKTYTMAVYADGKKIGEGVGSSKKNAEQAAAYQ 223

Query: 1823 ALAVLKE 1829
            AL V K+
Sbjct: 224  ALKVAKQ 230



 Score = 50.4 bits (119), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLF 1422
            L  +LKD     V  + +  EA T AS       +    YER E LGDA ++  VS +LF
Sbjct: 5    LTKKLKDDYGINVKNTDLFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVSEYLF 64

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             +YP   EG+L+R+R  MV      ++A       YI+
Sbjct: 65   KRYPSFPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIR 102


>gi|350579040|ref|XP_003480507.1| PREDICTED: Fanconi anemia group M protein [Sus scrofa]
          Length = 2053

 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 225/553 (40%), Gaps = 79/553 (14%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL++   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 100 VRDYQLNIARTALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 155

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E      G    H     G  Q F   + W    D+K+VL +T Q+++N L    
Sbjct: 156 VTQQIEACYRVMGIPQSHMAEMTGSTQVFTRKEIW----DSKRVLFLTPQVMVNDLSRGA 211

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V   +
Sbjct: 212 CPAAEIKCLVIDEAHRALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAVQQVI 268

Query: 481 -DCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKA--ASLWSLHEQLKQME 537
            +  I+   L S+    +      + +EK V   SE +    KA    L +    L Q  
Sbjct: 269 TNLLIEQIELRSEDAPDILPYSHERRVEKLVVPLSEELAAIQKAYIQILEAFAHSLIQRN 328

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
           V +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L 
Sbjct: 329 VLMR---RDIPNLTKYQIILARDQFRKNPSPNIVGMQQ--------GIIEGEFAICISL- 376

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
               +  Y++ Q      Q   R+ Y                   C +++G      AK 
Sbjct: 377 ----YHGYELLQ------QMGMRSLY----------------FFLCGIMDGTKGMTRAKN 410

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVT---PKVQSLIKILL 714
             S N       N +   E + +H  S        I     D K     PK++ L ++++
Sbjct: 411 ELSRNEDFMKLYNHL---EYMFAHTRSTSTSGISAIQKGDKDKKFCYSHPKLKKLEEVVV 467

Query: 715 KY------QHTED-----FRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ 762
           ++      Q+T D      R +IF   R     +   +    P    ++  + +GH + +
Sbjct: 468 EHFKSWNAQNTSDKKCDKTRVMIFSSFRDSVQEIAEMLLRHQP---IIRVMTFVGHASGK 524

Query: 763 EMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            M+ F  +   E + +FR G    LV+T V EEGLDI + +++I FD  K+ +  +Q  G
Sbjct: 525 SMKGFTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMG 584

Query: 820 RARKPGSDYILMI 832
           R  +     I++I
Sbjct: 585 RTGRKRQGRIVVI 597


>gi|410339047|gb|JAA38470.1| Fanconi anemia, complementation group M [Pan troglodytes]
          Length = 2048

 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 127/559 (22%), Positives = 236/559 (42%), Gaps = 84/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+A L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLACLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  +TA+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALTATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L S    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQVLESFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECVFARTRST 426

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             +             G + I++G+     V S                   PK++ L +
Sbjct: 427 SAN-------------GISAIQQGDKNKKFVYSH------------------PKLKKLEE 455

Query: 712 ILLKY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +++++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH +
Sbjct: 456 VVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHAS 513

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q 
Sbjct: 514 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQR 573

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 574 MGRTGRKRQGRIVVILSEG 592


>gi|339448388|ref|ZP_08651944.1| ribonuclease III [Lactobacillus fructivorans KCTC 3543]
          Length = 235

 Score = 97.4 bits (241), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 111/245 (45%), Gaps = 37/245 (15%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            LED   IKF D  LL EA+T AS     P  G+  Y+RLEF+GDAV   +++ ++F  + 
Sbjct: 9    LEDKFNIKFNDESLLDEAMTQASYVNEHPGQGLKFYERLEFLGDAVYQLVVSDYIFRRFP 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
             LP GRLT LRAA VN  +F+R A +     ++R G        R               
Sbjct: 69   ELPQGRLTRLRAAMVNEHSFSRFARECHFDKYIRLGKGEEKANAR--------------- 113

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPV 1768
                    +   +L DI ES  GA++LD G  T       V  P LD     E       
Sbjct: 114  --------QRDSLLCDIFESFIGAVYLDQGMATVKHFCEIVIFPKLDEGWFDEFFDHKT- 164

Query: 1769 RELQERCQQQAE-GLEYK-ASRSG----NLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
             ELQE  Q+     L+Y+  S  G        V V I+G ++GV     KK A++ AA+ 
Sbjct: 165  -ELQEVVQEDGPVDLDYELVSEDGPDNDRKFKVAVKINGKEMGVGLGHSKKDAEQKAAKK 223

Query: 1823 ALAVL 1827
            AL  L
Sbjct: 224  ALNEL 228



 Score = 53.9 bits (128), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 7/94 (7%)

Query: 1374 LKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLFLKYP 1426
            L+DK N       +L EA+T AS       Q    YER E LGDA  + VVS ++F ++P
Sbjct: 9    LEDKFNIKFNDESLLDEAMTQASYVNEHPGQGLKFYERLEFLGDAVYQLVVSDYIFRRFP 68

Query: 1427 QKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            +  +G+LTR+R  MV+     ++A       YI+
Sbjct: 69   ELPQGRLTRLRAAMVNEHSFSRFARECHFDKYIR 102


>gi|73963567|ref|XP_537429.2| PREDICTED: Fanconi anemia group M protein [Canis lupus familiaris]
          Length = 2047

 Score = 97.4 bits (241), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 131/590 (22%), Positives = 239/590 (40%), Gaps = 71/590 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   +   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLQITRTSLFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E      G    H     G  Q F   + W+    +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYRVMGIPQSHMAEMTGTTQAFTRKEIWR----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVD 481
                I  L++DE H A+  + Y  V+ E +  T+  +   +  ++A+P +      QV 
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELFKYTNHFR---ILALSATPGSDIKAIQQVI 259

Query: 482 CAIKICNLE--SKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKA--ASLWSLHEQLKQME 537
             ++I  +E  S+    +      + +EK V    E +    KA    L +    L Q  
Sbjct: 260 TNLRIGQIELRSEDSPDILPYSHERRVEKLVVPLGEELAAIQKAYIQVLEAFASSLIQRN 319

Query: 538 VAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALG 597
           + +    +     +K+Q + ARD   K     + G+ +    +G   +   L      L 
Sbjct: 320 ILMR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQGI-IEGEFAICISLYHGYELLQ 375

Query: 598 ELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKV 657
           ++G    Y      +   +   RA  +L     E ++ K+ + L C       +      
Sbjct: 376 QMGMRSLYFFLCGIMDGTKGMTRAKNELSR--NEDFM-KLYNHLACMFAHTCGT------ 426

Query: 658 VDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY- 716
             S NGF     + I++G+       S                   PK++ L +++L++ 
Sbjct: 427 --SANGF-----STIQKGDKDKKFFYSH------------------PKLKKLEEVVLEHF 461

Query: 717 -----QHT-----EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRT 766
                Q+T     ++ R +IF     +   + ++   L     ++  + +GH + + M+ 
Sbjct: 462 KSWNIQNTSEKKCDETRVMIFSSFRDSVQEIAEML--LQHQPVIRVMTFVGHASGKSMKG 519

Query: 767 FQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARK 823
           F  +   E + +FR G    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR  +
Sbjct: 520 FTQKEQLEVVKQFRSGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGR 579

Query: 824 PGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKDTSRLI 873
                I++I        T+ ++  N     +  +  R  L   + + R++
Sbjct: 580 KRKGRIVVILAEGREERTYNQSQSNKRSIYKAISGNRQVLHFYQGSPRMV 629


>gi|339264092|ref|XP_003366828.1| endoribonuclease Dicer [Trichinella spiralis]
 gi|316961980|gb|EFV48479.1| endoribonuclease Dicer [Trichinella spiralis]
          Length = 325

 Score = 97.1 bits (240), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 42/257 (16%)

Query: 1558 LMKWIGIQVESDPEEV-----------------GCPSRPACV-PESVLRSV----DFHAL 1595
            L+KW GI ++ +   +                  C      + PE+ + S+    D ++ 
Sbjct: 7    LLKWFGIDIDGNLMNLLSSSSSSSSSSSSSSTAFCSENCVLIGPEAKIHSIWTAYDLNSF 66

Query: 1596 EDALKIKFKDRGLLVEAITHA---SRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNL 1652
            E  +  +F ++  L++A+TH+      +     Y+RLEF+GDA+LD+LI++HL+ S    
Sbjct: 67   EAKIGYRFTNKAYLIQALTHSLYNEVETPVTDSYERLEFLGDAILDYLISRHLYSSKRIR 126

Query: 1653 PPGRLTDLRAAAVNNE----NFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
             PG L+DLRAA VNN     N   ++V  +  + +R    +++     ++ E  ++  + 
Sbjct: 127  SPGLLSDLRAALVNNYFLYFNAELLSVNERFVLAMRGLKESVNFHNELYMMEEEQDDDEK 186

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETL----- 1763
              + F     + PK LGDI ES+AGAIFLDS    + VWQV+  ++   +  +       
Sbjct: 187  ETSEFA-EHVEVPKPLGDIFESVAGAIFLDSHCSLATVWQVYYNMIAEEIGKQRSDFTSF 245

Query: 1764 -------PMHPVRELQE 1773
                   P+ PVR L E
Sbjct: 246  NKCLCHPPISPVRHLLE 262


>gi|379055823|emb|CCD32415.1| dicer-1, partial [Rhopalosiphum padi]
          Length = 318

 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  N+P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 54   DLNNHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 113

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 114  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTSL 173

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T        + E+ + + K+G       + +DD+E+  L    +  + 
Sbjct: 174  WNMITLPTFKDPTDK------EIEEVIQQFKVG-------FSNDDLENTPLFVPYNLVTQ 220

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGC---PSRPACV 1582
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    PS P   
Sbjct: 221  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPSLDNSKLGYLKPPSSPLLR 280

Query: 1583 ----PESVLRSV--DFHALEDALKIKFKDRGLLVEAIT 1614
                PE  L  +   F + E  L  +F+DR  L++A+T
Sbjct: 281  NVHDPEGELAKLMNGFESFEQHLGYRFQDRSYLLQAMT 318



 Score = 42.7 bits (99), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+N
Sbjct: 65   VLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSN 122

Query: 1668 ENFARVA 1674
             N  R+ 
Sbjct: 123  LNLYRLG 129


>gi|116333590|ref|YP_795117.1| ribonuclease III [Lactobacillus brevis ATCC 367]
 gi|116098937|gb|ABJ64086.1| dsRNA-specific ribonuclease [Lactobacillus brevis ATCC 367]
          Length = 229

 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 112/246 (45%), Gaps = 37/246 (15%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D   I FKD+ LL EA T AS     P  G+  Y+R+EF+GDAV+  +++ ++F  Y 
Sbjct: 9    LKDRFDIHFKDQSLLDEAFTQASYVNEHPHQGLKFYERIEFLGDAVMQLVVSNYIFRRYP 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
             +P GRLT LRAA VN ++FA  A +     ++R G      Q R               
Sbjct: 69   AMPQGRLTRLRAAMVNEQSFASFARECHFDQYIRLGRGEEKAQAR--------------- 113

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD--TSVVWQVFQPLLDPMVTPETLPMHPV 1768
                    +   +L DI ES  GA+++D G D     V  V  P LD     E       
Sbjct: 114  --------QRDSLLCDIFESFIGALYMDQGLDKVVEFVTTVVFPKLDEGRFDEFFDHKT- 164

Query: 1769 RELQERCQQQA------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
             ELQE  Q+          L+ +   +     V VY+D   +G      KK A++ AAR+
Sbjct: 165  -ELQELVQKNGPVDIDYRLLDEEGPDNDRAFKVAVYVDDKLLGEGHGHSKKHAEQNAARH 223

Query: 1823 ALAVLK 1828
            AL  LK
Sbjct: 224  ALENLK 229



 Score = 55.5 bits (132), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLF 1422
            L  +LKD+ +       +L EA T AS       Q    YER E LGDA ++ VVS ++F
Sbjct: 5    LNQELKDRFDIHFKDQSLLDEAFTQASYVNEHPHQGLKFYERIEFLGDAVMQLVVSNYIF 64

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQADR 1463
             +YP   +G+LTR+R  MV+      +A       YI+  R
Sbjct: 65   RRYPAMPQGRLTRLRAAMVNEQSFASFARECHFDQYIRLGR 105


>gi|379055825|emb|CCD32416.1| dicer-1, partial [Rhopalosiphum padi]
          Length = 318

 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 52/278 (18%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  N+P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 54   DLNNHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 113

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 114  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTSL 173

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T        + E+ + + K+G       + +DD+E+  L    +  + 
Sbjct: 174  WNMITLPTFKDPTDK------EIEEVIQQFKVG-------FSNDDLENTPLFVPYNLVTQ 220

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGC---PSRPACV 1582
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    PS P   
Sbjct: 221  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPSLDNSKLGYLKPPSSPLLR 280

Query: 1583 ----PESVLRSV--DFHALEDALKIKFKDRGLLVEAIT 1614
                PE  L  +   F + E  L  +F+DR  L++A+T
Sbjct: 281  NVHDPEGELAKLMNGFESFEQHLGYRFQDRSYLLQAMT 318



 Score = 42.7 bits (99), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+N
Sbjct: 65   VLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSN 122

Query: 1668 ENFARVA 1674
             N  R+ 
Sbjct: 123  LNLYRLG 129


>gi|313665378|ref|YP_004047249.1| ribonuclease III [Mycoplasma leachii PG50]
 gi|312949374|gb|ADR23970.1| ribonuclease III [Mycoplasma leachii PG50]
          Length = 232

 Score = 97.1 bits (240), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 38/242 (15%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            IK  D+ +  EA+TH S  +       YQRLEF+GDA+L    +K LFF+Y+ L  G LT
Sbjct: 12   IKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYTSKFLFFNYSKLGEGELT 71

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
             LRA+ V  E+ +R+A    L   +R G S               EL+  G+        
Sbjct: 72   RLRASIVREESLSRIARDINLGQLIRLGHS---------------ELMTKGY-------- 108

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVW---QVFQPLLDPMVTPETLPMHPVRELQERC 1775
            +   +L DI E++  AI+LD   +  ++W    +F+ + DP     T       ELQE  
Sbjct: 109  EKQSILADIFEALTAAIYLDQSEEGLLIWLEQTLFKYMKDPTFINVTKDFK--SELQELL 166

Query: 1776 QQQ--------AEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            Q +         E  E+ A+ +  L TV + +DG + GV +   K+ A++ AA + L+ L
Sbjct: 167  QSEKRSDLKYITENEEFFANENKTLYTVSINLDGQKFGVGKGYSKQEAEQNAASDCLSKL 226

Query: 1828 KE 1829
            K+
Sbjct: 227  KK 228



 Score = 46.2 bits (108), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 34/61 (55%)

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            + Y+R E LGDA L+   S+FLF  Y +  EG+LTR+R  +V    L + A    L   I
Sbjct: 37   YSYQRLEFLGDAILQMYTSKFLFFNYSKLGEGELTRLRASIVREESLSRIARDINLGQLI 96

Query: 1460 Q 1460
            +
Sbjct: 97   R 97


>gi|449668207|ref|XP_002154892.2| PREDICTED: uncharacterized protein LOC100214913 [Hydra
           magnipapillata]
          Length = 712

 Score = 97.1 bits (240), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 301 EEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPK 360
           +++ R YQ+    +A + N I  L+TG GKTLIA +LI  +C      N + + + +V +
Sbjct: 157 KKEPRQYQIQAFIEALQSNLIVVLKTGFGKTLIASMLIGRMC----EINPQKMGLMIVDR 212

Query: 361 VPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHS 420
           +PLV+Q A  I   T   V   CGE        +    +FD   VL++TA    ++++  
Sbjct: 213 IPLVFQHAASISSDTNLRVVSLCGENKTKHTIKRINDGDFD---VLIITAGAFYDMVKQK 269

Query: 421 IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQV 480
            I      ++++DECHHA   H Y  V+ + + +     +P + G+TASP+N K ++   
Sbjct: 270 YIDANMFCVVVIDECHHATGGHKYLDVL-QIFTSMPLANQPRILGLTASPINAKTITQAT 328

Query: 481 D 481
           D
Sbjct: 329 D 329


>gi|281201329|gb|EFA75541.1| hypothetical protein PPL_11046 [Polysphondylium pallidum PN500]
          Length = 1128

 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 14/184 (7%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQ    ++A + N I  + TG GKT IA ++I    + ++  N K   +FLV ++P
Sbjct: 200 QPRKYQKYFYKKAMEDNIICCIPTGLGKTQIAAMVI----SKMKEMNPKKRILFLVERIP 255

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV Q    I +QTG  V    G+M  D        +  D   VLV  +   LN+L+ + +
Sbjct: 256 LVLQLENYIHDQTGLNVIGVHGDMSID-------AKLNDHHDVLVSISSFFLNLLKFNKV 308

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            M   +L++ DE HH VK + +S+++   Y    ++ +P V G+TASP    G SS +D 
Sbjct: 309 VMGQYSLIVFDEAHHMVKDNSFSMLLKNHYKAMKEDVKPKVMGLTASP---GGKSSWIDT 365

Query: 483 AIKI 486
            I +
Sbjct: 366 FISL 369



 Score = 65.1 bits (157), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 46/77 (59%)

Query: 757 GHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
           G   S    T   ++ + KFR G+  ++VAT+V EEGLD+ +CNVVIR D   TV A+ Q
Sbjct: 555 GSTKSGGQSTKSQKDNVEKFRSGQYNVIVATAVLEEGLDVPKCNVVIRIDSPATVTAFTQ 614

Query: 817 SRGRARKPGSDYILMIE 833
            RG  R   S++  +++
Sbjct: 615 CRGHLRSKKSEFYAILK 631


>gi|403297888|ref|XP_003939778.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 [Saimiri
           boliviensis boliviensis]
          Length = 937

 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 138/558 (24%), Positives = 239/558 (42%), Gaps = 71/558 (12%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLVPK 360
           R YQL++   AKK KNTI    TG GKT +A+L    IC + L++  Q +K   VF   +
Sbjct: 244 RSYQLELALPAKKGKNTIICAPTGCGKTFVALL----ICEHHLKKFPQGQKGKVVFFANQ 299

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           +P+  QQ  V     E+ GY V    G       D    ++  +   ++++T QIL+N L
Sbjct: 300 IPVYEQQKSVFSKYFERLGYRVTGISGATA----DNAPVKQMVENNDIIILTPQILVNNL 355

Query: 418 RHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGV 476
           ++  I  +    L+I DEC                 H TSK+   ++         L G 
Sbjct: 356 KNGTIPSLSVFTLMIFDEC-----------------HNTSKQHPYNMIMFNYLDQKLGGS 398

Query: 477 SSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQM 536
           S  +   I +        +    + D K  ++ +    ++    D A+ + ++ + L+++
Sbjct: 399 SGPLPQVIGL--------TASVGVGDAKSTDEALDYICKLCASLD-ASVIATVRDNLEEL 449

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
           E  V +  Q   R+ + +          + +R+   +++R   D   NL Q ++   +  
Sbjct: 450 EQVVYKP-QKFFRKVESRINDKFKCIIAQLMRETESLAKRICKD-LENLSQ-IQNREFGT 506

Query: 597 GELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELV---EGAVSKK 653
            +  QW    V ++ +          +Q+  K +ES + K + L    L    +  +  +
Sbjct: 507 QKYEQWIV-TVQKACMV---------FQMPDKDEESRICKALFLYTSHLRKYNDALIINE 556

Query: 654 DAKVVDSENGFVEGGTNEIEEG--ELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
           DA++ D+ +   +  +N    G  E          E +  +   +       PK++ L  
Sbjct: 557 DARMKDALHYLKDFFSNVRAAGFDETEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCF 616

Query: 712 ILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHN--NSQEMRTFQ 768
           IL + Y    +   I+FV+       L       P LSF+K   L G +  N     T  
Sbjct: 617 ILREEYHLNPETITILFVKTRALVDALKNWIEGNPQLSFLKPGILTGRSKTNQNTGMTLP 676

Query: 769 MQETIA-KFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            Q+ I   F+  G   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+RGR R  GS
Sbjct: 677 AQKCILDSFKAHGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGS 736

Query: 827 DYILM------IERGNLS 838
              L+      IE+ N++
Sbjct: 737 KCFLLTSSAAVIEKENIN 754


>gi|290989569|ref|XP_002677410.1| hypothetical protein NAEGRDRAFT_48963 [Naegleria gruberi]
 gi|284091017|gb|EFC44666.1| hypothetical protein NAEGRDRAFT_48963 [Naegleria gruberi]
          Length = 1214

 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 126/283 (44%), Gaps = 68/283 (24%)

Query: 302 EQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIR---------------------- 339
           E+ R YQL++L ++   N+I  L TG GKTL+A LLI                       
Sbjct: 27  EKPRAYQLELLRESIDGNSICILPTGTGKTLLACLLIDQLLHQNDKKEYMGDEYFLSSKC 86

Query: 340 SICNDLQRQ-------NKKMLA---VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMG-- 387
           S C   Q++       +KK L     FLVP   L  QQ E I +   Y     C +M   
Sbjct: 87  SCCISDQKKPPTNGPPDKKKLTKKIFFLVPTTALRKQQQEAIFK---YFYKRECSKMKIK 143

Query: 388 QDFW--DAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYS 445
           +DF    ++ W        V+V T QILLN L+  II  E I LL+ DE HHA K HPY 
Sbjct: 144 KDFTIDSSKSWN-------VIVSTPQILLNALQSQIISFEDILLLVFDEAHHATKDHPYV 196

Query: 446 LVMSEFYHTTS--------------KEKR----PSVFGMTASPVN---LKGVSSQVDCAI 484
            +M ++YH                 K+++    P + G+TA+P +    K   ++    +
Sbjct: 197 KLMRDYYHNNKPIDPSLLAYNFNFLKDRQPIELPKILGLTATPASQSLYKTSLNEHTLFL 256

Query: 485 KICNLESKLDSVVCTIKD-RKELEKHVPMPSEVVVEYDKAASL 526
           +   LE  LD+ +    D  +E++KHV  P +  V Y   + L
Sbjct: 257 RKAKLEFSLDASIKVPYDYMEEMKKHVNNPRQHSVAYSSKSEL 299



 Score = 84.7 bits (208), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 9/168 (5%)

Query: 702 VTPKVQSLIKILLKYQHT-EDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           ++ KV+ L  ++  Y++T E+ R IIF ER+V    + K+F        +    LIG   
Sbjct: 378 ISDKVKILFDLVDTYENTNENMRCIIFAERIVHVKAIVKMFRMYRKFIPLNCKELIG--- 434

Query: 761 SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
              + + Q Q T+ K       LLVAT   EEGL+I +C++V++FD+  T   +IQS GR
Sbjct: 435 -SSVMSRQAQATVVKEFSHTTRLLVATKAGEEGLNISKCSLVVQFDICNTTREHIQSMGR 493

Query: 821 ARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIERTDLSHLKD 868
           AR   S Y+++ ++ + S    L N  N+E ++    I  T L  LK+
Sbjct: 494 ARHELSRYVVLYDKDDYSQIIMLTNMGNNERSI----IVDTALEELKE 537



 Score = 57.8 bits (138), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 173/436 (39%), Gaps = 113/436 (25%)

Query: 1334 YVFLPPELC--------FIHPLPGSLVRGAQRLPSIMRRVESMLLAIQLKDKINYP---- 1381
            YV L PE C        FI  L    V       ++M  VE  L+A  LK+++ +P    
Sbjct: 795  YVMLIPEFCKPTSLRIDFIESLRA--VFKTSNEGTLMSLVEQTLVAHDLKNQM-FPSCGY 851

Query: 1382 VPASKILEALTAASCQETFC-YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQM 1440
            +  S++  A+T  + Q     YER E  GD  LK+ V   + L++P ++       +   
Sbjct: 852  INLSELRNAITHRTSQNLDTNYERYEFFGDTILKYAVVLDIVLRFPFENMKFYNEEKTAK 911

Query: 1441 VSNLVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGDSSLFDQEKSVAEDK 1500
            VSN       L K  Q     D F  +++    V  +          S  +QE SV    
Sbjct: 912  VSN-----SNLRKLAQKLSIMDFFIETQYYHHNVAGI--------AFSKSEQEASVK--- 955

Query: 1501 LGTDKNYNEYEDDDMEDGELEGDSSSYRVLSSKTLADVVEALIGV---YYVEGGKDAANH 1557
                                            K  AD++E+LIG+   + +E G   A  
Sbjct: 956  ------------------------------GKKVRADIIESLIGLVGKHSIEEGVKLARD 985

Query: 1558 LMKWIGIQ--------VESDPEEVGCPSRPACVPESVLRSVDFHA--LEDALKIKFKDRG 1607
            L K +  Q        + S+PE V        + E+ +  ++ +A  LE  +  KFK+  
Sbjct: 986  L-KLVKKQNFIADKFILNSNPEYVKR------IIENTIPDIEKNAKELERIIGYKFKNIL 1038

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
                 + H S        Y+ LEFVGDAVLD  +++ +F ++  L    +   R+     
Sbjct: 1039 YAYYTLIHPSVDIGFNVNYETLEFVGDAVLDLYVSRTMFHNFY-LDQSEMHTFRS----- 1092

Query: 1668 ENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDCK-APKVLGD 1726
             NF R              ++AL++  +DF    +++LL      F   D K   K + D
Sbjct: 1093 -NFVR--------------NTALEKIAKDF---RIDQLL------FVKKDLKLKAKSISD 1128

Query: 1727 IVESIAGAIFLDSGRD 1742
            ++E++ GA+ LDS  D
Sbjct: 1129 VMEALIGAVALDSNLD 1144


>gi|341898470|gb|EGT54405.1| hypothetical protein CAEBREN_20187 [Caenorhabditis brenneri]
          Length = 1148

 Score = 96.7 bits (239), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 125/560 (22%), Positives = 244/560 (43%), Gaps = 83/560 (14%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++++ A + KN +    TG GKT +A+    +   + Q   +      LVPK+PL
Sbjct: 367 RVYQEELVQPALEGKNCVIVGPTGCGKTEVAIYAALNHLRERQAAGQTGRVAMLVPKIPL 426

Query: 364 VYQQAEVIRE--QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR--- 418
           V QQ E   +  +  + V  + G    D  + ++   +     ++VMT QIL+N+L+   
Sbjct: 427 VTQQKERFLQYCRGSFTVNGFFGSEKSDSGEGRK--DDVIESHIVVMTPQILINMLQSVR 484

Query: 419 -HSIIKMEAINLLILDECHHAVKKHPYSL---VMSEFYHTTSKEKRPSVFGMTASPVNLK 474
            +  + +   +++I DE H A   HPY +   ++ E+ H      +P + G+TAS +N+ 
Sbjct: 485 VNERLYVADFSMMIFDEVHKATGNHPYVIINQIVQEWEHD-----KPQIIGLTAS-LNVS 538

Query: 475 GVSSQVDCAIKICNLESKLDSV----VCTIKDRK---ELEKHVPMPSEVVVEYDKAASLW 527
             ++Q D +  + ++ + L  +    + TIK +    EL KHV  P +            
Sbjct: 539 S-TAQKDLSQMLFSIHTMLALLNAPYLSTIKLQASIDELNKHVSKPDD------------ 585

Query: 528 SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQ 587
                     V V +   ++ R     ++G        EL     +S+   +   +N  +
Sbjct: 586 ---------SVEVCQPTATALRNYIETYLGTAHIKLCHELE---SLSKLRHNCFPSNSYR 633

Query: 588 KLRAINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVE 647
           + + ++    E+ +     + Q  L  L   E+      +K+   Y+             
Sbjct: 634 RFKKLSPKFYEIYESNLQNINQD-LKKLNTAEKTIAVTWMKYIRLYVE----------AR 682

Query: 648 GAVSKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQ 707
           G V    A++V     F+E    E++ G  L        +    +   A +D    P + 
Sbjct: 683 GMVDLMPARLVFE---FMEARIRELDTGHKLGDQFSDFFKKYSGLEANAKSD---EPMIV 736

Query: 708 SLIK--ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS----------L 755
           + +K  ++ +++ T D R IIFV +   A  +     +   +   +             +
Sbjct: 737 TKLKDTLITQFKVTPDSRVIIFVTQRATAQRISDFLNKSHIMDQFRDPDDDGYDEMVGFV 796

Query: 756 IGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK-TV 811
           +G NN   + +    + Q+ +++F +G++ ++VATSV EEGLD+  CN++I+++ +  + 
Sbjct: 797 LGTNNQGGAVQQSQQEQQKVLSRFNNGKMKVIVATSVVEEGLDVTSCNLIIKYNCSSGSA 856

Query: 812 LAYIQSRGRARKPGSDYILM 831
           +  +Q RGRAR   S  +L+
Sbjct: 857 IQLVQRRGRARAKNSRSVLL 876


>gi|222529151|ref|YP_002573033.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
 gi|222455998|gb|ACM60260.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
          Length = 222

 Score = 96.3 bits (238), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 124/248 (50%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL  KF D+ LL  A+TH S   S  +CY+RLEF+GDA L+ +++K+LF  +  L  
Sbjct: 4    IEKALGYKFMDKNLLRLALTHKSATHSNKNCYERLEFLGDAALELVVSKYLFVHFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  +++A K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D+VE+I GAIF++SG +    ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILTDVVEAIFGAIFIESGFEKLEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E +E K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EFVQKKGQKKIVYKDYEIIEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 54.7 bits (130), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+ VVS++LF+ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERLEFLGDAALELVVSKYLFVHFPELSEGELTNIRAAVVCSQTLSKIAEKLNLKNHI 92


>gi|377809761|ref|YP_005004982.1| ribonuclease III [Pediococcus claussenii ATCC BAA-344]
 gi|361056502|gb|AEV95306.1| ribonuclease III [Pediococcus claussenii ATCC BAA-344]
          Length = 232

 Score = 96.3 bits (238), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 41/254 (16%)

Query: 1594 ALEDAL----KIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHL 1645
            ALED L     I F +  LL EA T AS     P+ G+  Y+R+EF+GDAVL  +++++L
Sbjct: 4    ALEDDLAQNFNIHFNNHDLLDEAFTQASYVNEHPNQGLKFYERIEFLGDAVLQIVVSEYL 63

Query: 1646 FFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEEL 1705
            F  Y  +P G+LT LRAA V  ++F+  A +     ++R G                EEL
Sbjct: 64   FKRYPEMPQGKLTRLRAAMVKEDSFSDFAKECHFDRYIRLGKG--------------EEL 109

Query: 1706 LKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETL 1763
                      G  +   +L DI ES  GA++LD GRD     V +V  P LD       +
Sbjct: 110  ---------SGARQRSSLLCDIFESFTGALYLDQGRDAVEEFVQKVIFPKLDEGRFDHVI 160

Query: 1764 PMHPVRELQERCQQQAE-GLEYK-----ASRSGNLATVEVYIDGVQVGVAQNPQKKMAQK 1817
                  ELQE  Q   +  ++Y+        +  +  VE+  DG ++   +   KK+A++
Sbjct: 161  DHKS--ELQEVLQVHGDVDIDYQLIAETGGENDRVFEVELIADGKKLSRGKGTSKKLAEQ 218

Query: 1818 LAARNALAVLKEKE 1831
             AA  AL  +K K+
Sbjct: 219  NAANKALQQIKSKK 232



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 1389 EALTAASC------QETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVS 1442
            EA T AS       Q    YER E LGDA L+ VVS +LF +YP+  +G+LTR+R  MV 
Sbjct: 25   EAFTQASYVNEHPNQGLKFYERIEFLGDAVLQIVVSEYLFKRYPEMPQGKLTRLRAAMVK 84

Query: 1443 NLVLYQYALSKGLQSYIQ 1460
                  +A       YI+
Sbjct: 85   EDSFSDFAKECHFDRYIR 102


>gi|198430581|ref|XP_002121377.1| PREDICTED: similar to DEAD/H box polypeptide RIG-I [Ciona
           intestinalis]
          Length = 1013

 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 10/180 (5%)

Query: 296 KEKMPEEQARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           +E +PE   R YQL++ EQA   +N++    TG+GKT +A+     +C D   +      
Sbjct: 292 EESLPELNLRDYQLELAEQAMSGENSLIVAPTGSGKTFVAL----KVCKDHIEKRPDSRV 347

Query: 355 VFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
           VF+VP+VPL+ QQ E+ +   G   G        +   A   +   D K +  +T QIL+
Sbjct: 348 VFMVPRVPLIKQQYELFKCFLGDGQGILRAISTDETLSAPADRLILDHK-ISFLTPQILV 406

Query: 415 NILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----PSVFGMTASP 470
           N+LR     +  + LLI DECHH VK  PY+ +M  ++    K +R    P + G+TASP
Sbjct: 407 NLLRQDPSFINKLGLLIFDECHHTVKGDPYNSIMKIYHDNLLKNRRLDILPQIVGLTASP 466



 Score = 74.7 bits (182), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 7/135 (5%)

Query: 703 TPKVQSLIKIL-LKYQHTEDFRAIIFVER--VVAALVLPKVFAELPSLSFVKSASLIGHN 759
            P + +L KIL  ++    + + IIFV    +  AL+     +E+  L  +    L G  
Sbjct: 652 NPMINALYKILKTEFTKQPESKCIIFVRTRPIAKALITCIEESEVEKLH-LNPKQLTGAG 710

Query: 760 NSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
            + E   M     ++TIA FRDGR  ++VATSVAEEGLDI+ CN++I ++ +   +  +Q
Sbjct: 711 AAVELGGMTKATQEDTIASFRDGRCKVIVATSVAEEGLDIKACNLIITYNYSTNEIGQVQ 770

Query: 817 SRGRARKPGSDYILM 831
            +GR R  GS  I++
Sbjct: 771 RQGRGRAKGSKMIIL 785


>gi|379055865|emb|CCD32436.1| dicer-1, partial [Sitobion avenae]
          Length = 319

 Score = 96.3 bits (238), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 58/281 (20%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  N+P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 55   DLNNHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 114

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 115  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTL 174

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T        + E+++ + K+G       + + D+E+  L    +  + 
Sbjct: 175  WNMITLPTFKDPTDK------EIEEAIQQFKVG-------FSNQDIENTPLFVPYNLVTQ 221

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPES 1585
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     
Sbjct: 222  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SP 278

Query: 1586 VLRSVD------------FHALEDALKIKFKDRGLLVEAIT 1614
            +LR+VD            F + E  L  +F+DR  L++A+T
Sbjct: 279  LLRNVDDPEGELTKLMDGFESFEQHLGYRFQDRSYLLQAMT 319



 Score = 42.7 bits (99), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+
Sbjct: 65   SVLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122

Query: 1667 NENFARVA 1674
            N N  R+ 
Sbjct: 123  NLNLYRLG 130


>gi|312793340|ref|YP_004026263.1| ribonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180480|gb|ADQ40650.1| ribonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 222

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 41/248 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPP 1654
            +E AL   FKD+ LL  A+TH S   S  +CY+R EF+GDA L+  ++K+LF  +  L  
Sbjct: 4    IERALGYTFKDKNLLRLALTHKSATHSNKNCYERFEFLGDAALELAVSKYLFVHFPELSE 63

Query: 1655 GRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFG 1714
            G LT++RAA V ++  ++VA K  L  H+  G            +E +E+          
Sbjct: 64   GELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGK-----------REKMEKFH-------- 104

Query: 1715 LGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMHPVRELQ 1772
                +   +L D++E+I GAIF++SG D    ++  + +P +   V  +    +  + LQ
Sbjct: 105  ----ENKSILADVLEAIFGAIFIESGFDIVEKIIVNLLKPYIQKAVAGKLFYDYKTK-LQ 159

Query: 1773 ERCQQQA---------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNA 1823
            E  Q++          E +E K  +S      E++I+G +V       KK AQ+ AA   
Sbjct: 160  EIVQREGNKKIVYKDCEIIEKKYFKS------ELFIEGKKVSEGYGTSKKEAQQDAAYKF 213

Query: 1824 LAVLKEKE 1831
            L  + E+E
Sbjct: 214  LLEMGEQE 221



 Score = 53.1 bits (126), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 39/59 (66%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            CYER E LGDA L+  VS++LF+ +P+  EG+LT +R  +V +  L + A    L+++I
Sbjct: 34   CYERFEFLGDAALELAVSKYLFVHFPELSEGELTNIRAAVVCSQTLSKVAEKLNLKNHI 92


>gi|160892686|ref|ZP_02073476.1| hypothetical protein CLOL250_00216 [Clostridium sp. L2-50]
 gi|156865727|gb|EDO59158.1| ribonuclease III [Clostridium sp. L2-50]
          Length = 230

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 34/249 (13%)

Query: 1592 FHALEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFF 1647
            FH +ED +   F+D  LLV A+TH S    R  + V  Y+R EF+GDA+L+ +++++L+ 
Sbjct: 6    FHNIEDIIGYTFRDLDLLVTALTHKSYANERKINKVESYERSEFLGDAILEFVVSEYLYQ 65

Query: 1648 SYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLK 1707
            +Y   P G+LT LRA+ V     ++++ +      L+ G   L  +  D           
Sbjct: 66   NYPEYPEGKLTKLRASLVCEFTLSQISKE------LKFGHYVLLSKGEDLT--------- 110

Query: 1708 PGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHP 1767
                    G      ++ D+ E++ GAI+LD G D +  + V + LLD + T  +L    
Sbjct: 111  --------GGRNRNSIMCDLFEAVLGAIYLDGGLDEAKKF-VHRFLLDDVET-HSLFYDA 160

Query: 1768 VRELQERCQQQAEGLEY-----KASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARN 1822
               LQE  Q++ + L Y     K          EV I+G  V   +   +K +++ AA N
Sbjct: 161  KSTLQELAQKEEKTLTYALLEEKGPDHNKSYVSEVCINGEHVATGEGASRKASEQTAAYN 220

Query: 1823 ALAVLKEKE 1831
            AL  +K+K+
Sbjct: 221  ALLQIKKKQ 229



 Score = 53.1 bits (126), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 1402 YERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQ 1456
            YER+E LGDA L++VVS +L+  YP+  EG+LT++R  +V    L Q  +SK L+
Sbjct: 44   YERSEFLGDAILEFVVSEYLYQNYPEYPEGKLTKLRASLVCEFTLSQ--ISKELK 96


>gi|302808147|ref|XP_002985768.1| hypothetical protein SELMODRAFT_122841 [Selaginella moellendorffii]
 gi|300146677|gb|EFJ13346.1| hypothetical protein SELMODRAFT_122841 [Selaginella moellendorffii]
          Length = 219

 Score = 95.9 bits (237), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 24/205 (11%)

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQVESDPEE--------VGCPSRP 1579
            ++LS+KTLADVVEA++G   +EG   AA     W+ I V   PE          GC S  
Sbjct: 11   QLLSTKTLADVVEAVLGACVLEGELAAAMAAANWLQIPVRFPPEAEDHHRFEVTGCGS-- 68

Query: 1580 ACVPESVLRSVDFHALEDALKIKFKDRGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDH 1639
                   L   D   L++ L  +F+++ +L  A++      +    ++RLEF+GDAVLD+
Sbjct: 69   -------LTDDDLKELQEKLGYQFRNKQVLRVALSFHDDNFT----FRRLEFLGDAVLDY 117

Query: 1640 LITKHLFFSYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVK 1699
            L+T+HL  S+ +   GR   ++ A +N E+++ ++++H  HV+L+        QI +F +
Sbjct: 118  LVTRHLVRSFPDQSAGRHNTIKQATINKEHYSCISIRHGFHVYLQ--KVHFVPQIAEFAE 175

Query: 1700 EVLEELLK-PGFNSFGLGDCKAPKV 1723
             ++EE  +    ++FG+    +PKV
Sbjct: 176  SLVEEHARGKACSTFGISRLNSPKV 200



 Score = 43.9 bits (102), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 1373 QLKDKINYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQ 1432
            +L++K+ Y     ++L    +    + F + R E LGDA L ++V+R L   +P +  G+
Sbjct: 76   ELQEKLGYQFRNKQVLRVALSFH-DDNFTFRRLEFLGDAVLDYLVTRHLVRSFPDQSAGR 134

Query: 1433 LTRMRQQMVSNLVLYQYALSKGLQSYIQADRFAP 1466
               ++Q  ++       ++  G   Y+Q   F P
Sbjct: 135  HNTIKQATINKEHYSCISIRHGFHVYLQKVHFVP 168


>gi|297695020|ref|XP_002824758.1| PREDICTED: Fanconi anemia group M protein [Pongo abelii]
          Length = 1967

 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 126/559 (22%), Positives = 235/559 (42%), Gaps = 84/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L S    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQILESFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMR---RDIPNLTKYQIILARDQFRKNPSPNIMGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECMFAHTRST 426

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             +             G + I++G+     V S                   PK++ L +
Sbjct: 427 SAN-------------GISAIQQGDKHKKFVYSH------------------PKLKKLEE 455

Query: 712 ILLKY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +++++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH +
Sbjct: 456 VVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHAS 513

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  IQ 
Sbjct: 514 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLIQR 573

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 574 MGRTGRKRQGRIVVILSEG 592


>gi|16551654|dbj|BAB71141.1| unnamed protein product [Homo sapiens]
          Length = 468

 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    + V  K+  LIG  +S E +   
Sbjct: 151 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 210

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR GR+ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 211 QNEQKEVISKFRTGRINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 270

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 271 STYVLVAHSGS 281


>gi|426221009|ref|XP_004004704.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Ovis aries]
          Length = 1023

 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE   R IIF +   +A  L +   E    S   VK+  LIG  +S E +   
Sbjct: 705 IMEQYSRTEGSARGIIFTKTRQSAYALSQWITENEKFSEVGVKAHHLIGAGHSSEFKPMT 764

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 765 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 824

Query: 826 SDYILMIERGN 836
           S Y+L+ + G+
Sbjct: 825 STYVLVAQSGS 835



 Score = 73.6 bits (179), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 26/226 (11%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQL+V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 303 PELNLRPYQLEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVMVLV 362

Query: 359 PKVPLVYQQAEVIREQTGYVVG--HYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            KVPLV Q   + R++    +   ++   +  D      +     +  V++ TAQIL N 
Sbjct: 363 NKVPLVEQ---LFRKEFEPFLKKWYHVTRLSGDTQLKITFPEVVKSHDVIISTAQILENS 419

Query: 417 LRHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---------- 460
           L +S       I++   +L+I+DECHH  K+  Y+ +M  +     K  +          
Sbjct: 420 LLNSEEGEDDGIELSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKENKPVIP 479

Query: 461 -PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
            P + G+TASP  + G   Q      I  + + LD+V  TIK  K+
Sbjct: 480 LPQIVGLTASP-GVGGAKKQAKAEEHILKICANLDAV--TIKTVKQ 522


>gi|296214902|ref|XP_002753903.1| PREDICTED: Fanconi anemia group M protein [Callithrix jacchus]
          Length = 2043

 Score = 95.5 bits (236), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 230/559 (41%), Gaps = 86/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKFTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L +    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQILEAFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V + +     S  +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMRKDI---SNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+   L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELSRNEDFM-KLYKHLECMFAHTRST 426

Query: 652 KKD--AKVVDSENGFVEGGTNEIEEGELLDSHVVS------GGEHVD---VIIGAAVADG 700
             +  + +   +  FV G     +  E++  H  S       G+  D   V+I ++  D 
Sbjct: 427 SANGISAIQQGDKKFVYGHPKLKKLEEVVIEHFKSWNAENTSGKKRDKTRVMIFSSFRDS 486

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
                VQ + ++L   QH    R + FV                            GH +
Sbjct: 487 -----VQEIAEML--SQHQPIIRVMTFV----------------------------GHAS 511

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q 
Sbjct: 512 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQR 571

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 572 MGRTGRKRQGRIVVILSEG 590


>gi|392388813|ref|YP_005907222.1| ribonuclease=3 [Mycoplasma leachii 99/014/6]
 gi|339276458|emb|CBV67037.1| Ribonuclease=3 [Mycoplasma leachii 99/014/6]
          Length = 232

 Score = 95.1 bits (235), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            IK  D+ +  EA+TH S  +       YQRLEF+GDA+L    +K LFF+Y+ L  G LT
Sbjct: 12   IKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYTSKFLFFNYSKLGEGELT 71

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
             LRA+ V  E+ +R+A    L   +R G                 EL+  G+        
Sbjct: 72   RLRASIVREESLSRIARDINLGQLIRLGHG---------------ELMTKGY-------- 108

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVW---QVFQPLLDPMVTPETLPMHPVRELQERC 1775
            +   +L DI E++  AI+LD   +  ++W    +F+ + DP     T       ELQE  
Sbjct: 109  EKQSILADIFEALTAAIYLDQSEEGLLIWLEQTLFKYMKDPTFINVTKDFK--SELQELL 166

Query: 1776 QQQ--------AEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            Q +         E  E+ A+ +  L TV + +DG + GV +   K+ A++ AA + L+ L
Sbjct: 167  QSEKRSDLKYITENEEFFANENKTLYTVSINLDGQKFGVGKGYSKQEAEQNAASDCLSKL 226

Query: 1828 KE 1829
            K+
Sbjct: 227  KK 228



 Score = 46.2 bits (108), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 34/61 (55%)

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            + Y+R E LGDA L+   S+FLF  Y +  EG+LTR+R  +V    L + A    L   I
Sbjct: 37   YSYQRLEFLGDAILQMYTSKFLFFNYSKLGEGELTRLRASIVREESLSRIARDINLGQLI 96

Query: 1460 Q 1460
            +
Sbjct: 97   R 97


>gi|359320815|ref|XP_003639433.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like [Canis
           lupus familiaris]
          Length = 923

 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 20/223 (8%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQR--QNKKMLAVFLVP 359
           + R YQL++   AK+ KNTI    TG GKT +A+L+     + L++  Q +K   VF   
Sbjct: 240 KPRNYQLELALPAKEGKNTIICAPTGCGKTFVALLICE---HHLKKFPQGQKGKIVFFAI 296

Query: 360 KVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
           ++P+  QQ  V     E+ GY V    G   ++    Q      +   ++V+T QIL+N 
Sbjct: 297 QIPVYEQQNSVFSKYFERLGYKVAGISGATSENISVEQI----VENNDIIVLTPQILVNC 352

Query: 417 LRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPVN 472
           LR+  I  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V 
Sbjct: 353 LRNGTIPSLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDPLPQVVGLTAS-VG 411

Query: 473 LKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMP 513
           +    + ++    IC L + LD SV+ T+KD  +ELE+ V  P
Sbjct: 412 IGDAKNTMEAMEYICKLCASLDTSVIATVKDNLEELEEIVYKP 454



 Score = 73.2 bits (178), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  IL + Y    + R I+FV+       L K   E   LSF+K   L G    N
Sbjct: 607 PKLKDLSFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFLKPGILTGRGKTN 666

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
           ++  M     +  +  FR DG   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+R
Sbjct: 667 HNTGMTLPAQKCALDAFRTDGDKKILIATSVADEGIDIAQCNLVILYEYVGNVIRMIQTR 726

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R  GS   L+    ++
Sbjct: 727 GRGRARGSKCFLLTSNADV 745


>gi|426376787|ref|XP_004055167.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Gorilla
           gorilla gorilla]
          Length = 2048

 Score = 95.1 bits (235), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 125/559 (22%), Positives = 235/559 (42%), Gaps = 84/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L S    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQILESFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNYLECMFARTRST 426

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             +             G + I++G+     V S                   PK++ L +
Sbjct: 427 SAN-------------GISAIQQGDKNKKFVYSH------------------PKLKKLEE 455

Query: 712 ILLKY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +++++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH +
Sbjct: 456 VVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHAS 513

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q 
Sbjct: 514 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQR 573

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 574 MGRTGRKRQGRIVIILSEG 592


>gi|13542321|ref|NP_112009.1| RNA helicase (ERCC4-like) [Thermoplasma volcanium GSS1]
 gi|14325756|dbj|BAB60659.1| translation initiation factor eIF4A [Thermoplasma volcanium GSS1]
          Length = 513

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 12/208 (5%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           + R YQ++V + +  KNT+  + TG GKTLIA +LI        ++NKK  ++FL P  P
Sbjct: 6   EPREYQINVYKNSIDKNTLIVMPTGLGKTLIAAMLIEKFF----KENKK--SIFLAPTKP 59

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSII 422
           LV Q    + +  G      C   G+   D+Q  +  + T ++ V T Q++LN ++  II
Sbjct: 60  LVLQHMATLVKVLGLNNNEICAFTGE--VDSQERELRWVTGKIFVSTPQVVLNDMKSGII 117

Query: 423 KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDC 482
            +   +L++ DE H AV  + Y  + SEF       K+  + G+TASP   KG   ++  
Sbjct: 118 DITRFDLIVFDEAHRAVGNYAYVDIASEFLEY----KKKLIIGLTASPGGEKGRFQEIVK 173

Query: 483 AIKICNLESKLDSVVCTIKDRKELEKHV 510
            + I N+  K +      K  K +E H+
Sbjct: 174 NLGIENVVVKTEKDEDVRKYIKSIEMHL 201



 Score = 52.8 bits (125), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 768 QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA--RKPG 825
           + ++ I +FR+G   +L+ATS+AEEGLDI   +VV+ ++   + + +IQ +GR    + G
Sbjct: 396 EQRQIIEQFRNGTYNVLIATSIAEEGLDIPDTDVVVFYEAVPSEIRFIQRKGRTGRSRSG 455

Query: 826 SDYILMIE 833
             YIL+ E
Sbjct: 456 EVYILVYE 463


>gi|83319588|ref|YP_424465.1| ribonuclease III [Mycoplasma capricolum subsp. capricolum ATCC 27343]
 gi|123535692|sp|Q2SRZ8.1|RNC_MYCCT RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
            Short=RNase III
 gi|83283474|gb|ABC01406.1| ribonuclease III [Mycoplasma capricolum subsp. capricolum ATCC 27343]
          Length = 232

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 38/245 (15%)

Query: 1601 IKFKDRGLLVEAITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLT 1658
            IK  D+ +  EA+TH S  +       YQRLEF+GDA+L   ++K LFF Y+ L  G LT
Sbjct: 12   IKINDQQIYKEALTHNSYANERKLKYSYQRLEFLGDAILQMYVSKFLFFHYSKLGEGELT 71

Query: 1659 DLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGDC 1718
             LR++ V  E+ +R+A    L   +R G                 EL+  G+        
Sbjct: 72   RLRSSTVREESLSRIAKDINLGQLIRLGHG---------------ELMTKGY-------- 108

Query: 1719 KAPKVLGDIVESIAGAIFLDSGRDTSVVW---QVFQPLLDPMVTPETLPMHPVRELQERC 1775
            +   +L DI E++  A+++D   D  ++W    +F+ + DP     T       ELQE  
Sbjct: 109  EKQSILADIFEALTAAVYIDQNEDGLLIWLEQTLFKYMKDPTFINVTKDFK--SELQELL 166

Query: 1776 QQQA--------EGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALAVL 1827
            Q +         E  E+  + +  L TV V +DG + GV +   K+ A++ AA + L+ L
Sbjct: 167  QSEKRSDLKYIIENEEFFVNENKTLYTVSVNLDGQKFGVGKGYSKQEAEQNAASDCLSKL 226

Query: 1828 KEKET 1832
            K+  T
Sbjct: 227  KKPLT 231



 Score = 47.4 bits (111), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 1400 FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYI 1459
            + Y+R E LGDA L+  VS+FLF  Y +  EG+LTR+R   V    L + A    L   I
Sbjct: 37   YSYQRLEFLGDAILQMYVSKFLFFHYSKLGEGELTRLRSSTVREESLSRIAKDINLGQLI 96

Query: 1460 Q 1460
            +
Sbjct: 97   R 97


>gi|397523571|ref|XP_003831801.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Pan paniscus]
          Length = 2048

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 125/559 (22%), Positives = 235/559 (42%), Gaps = 84/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L S    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQVLESFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECMFARTRST 426

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             +             G + I++G+     V S                   PK++ L +
Sbjct: 427 SAN-------------GISAIQQGDKNKKFVYSH------------------PKLKKLEE 455

Query: 712 ILLKY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +++++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH +
Sbjct: 456 VVIEHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHAS 513

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q 
Sbjct: 514 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQR 573

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 574 MGRTGRKRQGRIVVILSEG 592


>gi|341890882|gb|EGT46817.1| hypothetical protein CAEBREN_28255 [Caenorhabditis brenneri]
          Length = 1015

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 124/557 (22%), Positives = 245/557 (43%), Gaps = 77/557 (13%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           R YQ ++++ A + KN +    TG GKT +A+    +   + Q   +      LVPK+PL
Sbjct: 234 RVYQEELVQPALEGKNCVIVGPTGCGKTEVAIYAALNHLRERQAAGQTGRVAMLVPKIPL 293

Query: 364 VYQQAEVIRE--QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILR--- 418
           V QQ E   +  +  + V  + G    D  + ++   +     ++VMT QIL+N+L+   
Sbjct: 294 VTQQKERFLQYCRGSFTVNGFFGSEKSDSGEGRK--DDVIESHIVVMTPQILINMLQSVR 351

Query: 419 -HSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVS 477
            +  + +   +++I DE H A   HPY +++++       +K P + G+TAS +N+   +
Sbjct: 352 ANERLYVADFSMMIFDEVHKATGNHPY-VIINQIVQEWEYDK-PQIIGLTAS-LNVSS-T 407

Query: 478 SQVDCAIKICNLESKLDSV----VCTIKDRK---ELEKHVPMPSEVVVEYDKAASLWSLH 530
           +Q D +  + ++ + L  +    + TIK +    EL KHV  P +               
Sbjct: 408 AQKDLSQMLFSIHTMLALLNAPYLSTIKLQASIDELNKHVSKPDD--------------- 452

Query: 531 EQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLR 590
                  V V +   ++ R     ++G        EL     +S+   +   +N  ++ +
Sbjct: 453 ------SVEVCQPTATALRNYIETYLGTAHIKLCHELE---SLSKLRHNCFPSNSYRRFK 503

Query: 591 AINYALGELGQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAV 650
            ++    E+ +     + Q  L  L   E+      +K+   Y+             G V
Sbjct: 504 KLSPKFYEIYESNLQNINQD-LKKLNTAEKTIAVTWMKYIRLYVE----------ARGMV 552

Query: 651 SKKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLI 710
               A++V     F+E    E+++G  L        +    +   A +D    P + + +
Sbjct: 553 DLMPARLVFE---FMEARIRELDKGHKLGDQFSDFFKKYSGLEANAKSD---EPMIVTKL 606

Query: 711 K--ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSAS----------LIGH 758
           K  ++ +++ T D R IIFV +   A  +     +   +   +             ++G 
Sbjct: 607 KDTLITQFKVTPDSRVIIFVTQRATAQRISDFLNKSHIMDQFRDPDDDGYDEMVGFVLGT 666

Query: 759 NN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAK-TVLAY 814
           NN   + +    + Q+ +++F +G++ ++VATSV EEGLD+  CN++I+++ +  + +  
Sbjct: 667 NNQGGAVQQSQQEQQKVLSRFNNGKMKVIVATSVVEEGLDVTSCNLIIKYNCSSGSAIQL 726

Query: 815 IQSRGRARKPGSDYILM 831
           +Q RGRAR   S  +L+
Sbjct: 727 VQRRGRARAKNSRSVLL 743


>gi|348585927|ref|XP_003478722.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1-like [Cavia porcellus]
          Length = 1022

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           IL ++  TE   R IIF +   +A  L +  AE    + V  K+  LIG  +S E +   
Sbjct: 705 ILEQFTRTEKPTRGIIFTKTRQSAYALSQWIAENEKFADVGIKAHHLIGAGHSSEFKHMT 764

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN++IR+ L    +A +Q+RGRAR   
Sbjct: 765 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIIIRYSLVTNEIAMVQARGRARAEE 824

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 825 STYVLVAHSGS 835



 Score = 68.2 bits (165), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 24/243 (9%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE + R YQ++V + A + KN I  L TG+GKT +AV + +   +   + ++    + LV
Sbjct: 305 PELKLRSYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKGQASEPGKVIVLV 364

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            KV LV Q     +E   ++   Y    +  D      +     +  V++ TAQIL N L
Sbjct: 365 NKVMLVEQL--FTKEFKPFLKKWYRVTGLSGDTQLKISFPEVVKSHDVIISTAQILENSL 422

Query: 418 RHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----------- 460
            +S       +++   +L+I+DECHH  K+  Y+ +M  +     K K            
Sbjct: 423 LNSESGEDAGVQLSDFSLIIIDECHHTNKEDVYNNIMRRYLKQKLKNKALQKENKSVVPL 482

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKD-RKELEKHVPMPSEVVV 518
           P + G+TASP  + G + Q      I  + + LD S + T+KD   +L+  +  P +  V
Sbjct: 483 PQILGLTASP-GVGGATKQAKAEEHILKICANLDASTIKTVKDYYNQLKDQIKEPCKKFV 541

Query: 519 EYD 521
             D
Sbjct: 542 IAD 544


>gi|410968747|ref|XP_003990861.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Felis catus]
          Length = 1018

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 82/135 (60%), Gaps = 14/135 (10%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLP------KVFAELPSLSFVKSASLIGHNNSQEM 764
           I+ +Y  TE+  R IIF +   +A  L       K FAE+     VK+  LIG  +S E 
Sbjct: 700 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENKKFAEVG----VKAHHLIGAGHSSEF 755

Query: 765 RTF---QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
           +     + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRA
Sbjct: 756 KPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRA 815

Query: 822 RKPGSDYILMIERGN 836
           R   S Y+L+   G+
Sbjct: 816 RADESTYVLVAHSGS 830



 Score = 79.7 bits (195), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 296 PELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 355

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KVPLV Q   + R++    +  +   +G    D Q    +     T  V++ TAQIL N
Sbjct: 356 NKVPLVEQ---LFRKEFEPFLKKWYHTIGLS-GDTQLKISFPEVVKTYDVIISTAQILEN 411

Query: 416 ILRHSII------KMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +S I      ++   +L+++DECHH  K+  Y+ +M  +     K  +         
Sbjct: 412 SLLNSEIGEDDGVQLSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVI 471

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G   Q +    I  + + LD+  CTIK  KE
Sbjct: 472 PLPQILGLTASP-GVGGAKRQAEAKEHILKICANLDA--CTIKTVKE 515


>gi|332229232|ref|XP_003263795.1| PREDICTED: Fanconi anemia group M protein isoform 1 [Nomascus
           leucogenys]
          Length = 2050

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 125/559 (22%), Positives = 235/559 (42%), Gaps = 84/559 (15%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLQISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRHSI 421
           V QQ E   +  G    H     G  Q F   + W     +K+VL +T Q+++N L    
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEIWC----SKRVLFLTPQVMVNDLSRGA 202

Query: 422 IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV 480
                I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V  QV
Sbjct: 203 CPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAV-QQV 258

Query: 481 DCAIKICNLESKLD---SVVCTIKDRKELEKHVPMPSEV-VVEYDKAASLWSLHEQLKQM 536
              + I  +E + +    ++    +RK  +  VP+  E+  ++      L S    L Q 
Sbjct: 259 ITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAIQKTYIQILESFAHSLIQR 318

Query: 537 EVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL 596
            V +     +    +K+Q + ARD   K     + G+ +         +I+   AI  +L
Sbjct: 319 NVLMRRDIPN---LTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISL 367

Query: 597 ---GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVS 651
               EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +
Sbjct: 368 YHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECMFAHTRST 426

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIK 711
             +             G + I++G+     V S                   PK++ L +
Sbjct: 427 SAN-------------GISAIQQGDKNKKFVYSH------------------PKLKKLEE 455

Query: 712 ILLKY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           +++++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH +
Sbjct: 456 VVIEHFKSWNAENTSEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHAS 513

Query: 761 SQEMRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQS 817
            +  + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q 
Sbjct: 514 GKSTKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQR 573

Query: 818 RGRA-RKPGSDYILMIERG 835
            GR  RK     ++++  G
Sbjct: 574 MGRTGRKRQGRIVVILSEG 592


>gi|76609700|ref|XP_615590.2| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Bos taurus]
 gi|297471684|ref|XP_002685384.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Bos taurus]
 gi|296490601|tpg|DAA32714.1| TPA: interferon induced with helicase C domain 1-like [Bos taurus]
          Length = 1021

 Score = 94.7 bits (234), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE   R IIF +   +A  L +   E    S   VK+  LIG  +S E +   
Sbjct: 703 IMEQYSRTEGSARGIIFTKTRQSAYALSQWIIENEKFSEVGVKAHHLIGAGHSSEFKPMT 762

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 763 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 822

Query: 826 SDYILMIERGN 836
           S Y+L+ + G+
Sbjct: 823 STYVLVAQSGS 833



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 27/226 (11%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQL+V + A + KN I  L TG+GKT +AV + +    D ++ ++    + LV
Sbjct: 303 PELNLRPYQLEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHL-DKKKASEHGKVMVLV 361

Query: 359 PKVPLVYQQAEVIREQTGYVVG--HYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            KVPLV Q   + R++    +   ++   +  D      +     +  V++ TAQIL N 
Sbjct: 362 NKVPLVEQ---LFRKEFKPFLKKWYHVTRLSGDTQLKITFPEVVKSHDVIISTAQILENS 418

Query: 417 LRHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---------- 460
           L +S       I++   +L+I+DECHH  K+  Y+ +M  F     K  +          
Sbjct: 419 LLNSEEGEDDGIELSDFSLIIIDECHHTNKEAVYNNIMRRFLKQKLKNNKLKKENKPVIP 478

Query: 461 -PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
            P + G+TASP  + G   Q      I  + + LD+V  TIK  K+
Sbjct: 479 LPQIVGLTASP-GVGGAKKQAKAEEHILKICANLDAV--TIKTVKQ 521


>gi|344204974|ref|YP_004790116.1| ribonuclease III [Mycoplasma putrefaciens KS1]
 gi|343956897|gb|AEM68612.1| ribonuclease III [Mycoplasma putrefaciens KS1]
          Length = 230

 Score = 94.4 bits (233), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 74/245 (30%), Positives = 118/245 (48%), Gaps = 40/245 (16%)

Query: 1600 KIKFKDRGLLVEAITHASRPSSGV--SCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRL 1657
            +I+ K+  L  EA+TH S  +       YQR+EF+GDA+L   +++ LFF+Y  L  G L
Sbjct: 12   QIEIKNSALFDEALTHNSYSNEHRLRYTYQRMEFLGDALLQMYVSRFLFFNYPKLSEGEL 71

Query: 1658 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGFNSFGLGD 1717
            T LRA +V  E+ ++VA +  L   +R G                 EL   GF       
Sbjct: 72   TKLRANSVREESLSQVAKEINLGQLVRLGQG---------------ELKTKGF------- 109

Query: 1718 CKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPETLPMHPVRELQERCQQ 1777
             + P +L D+ E++  AI+LD G +    W + Q L   +  PE L  + +++ +   QQ
Sbjct: 110  -EKPSILADVFEALTAAIYLDQGEEILTSW-LEQTLFIYIQKPEFL--NKIKDFKSELQQ 165

Query: 1778 ------------QAEGLEYKASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAARNALA 1825
                          E  E+  + +  L TV V +DG + G+ Q   K+ A++ AA+N L+
Sbjct: 166  LLQSEKRSDLKYLVEAEEFIQTENKILYTVSVNLDGQKFGIGQGFSKQEAEQKAAQNCLS 225

Query: 1826 VLKEK 1830
             +K K
Sbjct: 226  KMKIK 230



 Score = 52.8 bits (125), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 1389 EALTAASCQET----FCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNL 1444
            EALT  S        + Y+R E LGDA L+  VSRFLF  YP+  EG+LT++R   V   
Sbjct: 23   EALTHNSYSNEHRLRYTYQRMEFLGDALLQMYVSRFLFFNYPKLSEGELTKLRANSVREE 82

Query: 1445 VLYQYA 1450
             L Q A
Sbjct: 83   SLSQVA 88


>gi|297668722|ref|XP_002812573.1| PREDICTED: LOW QUALITY PROTEIN: interferon-induced helicase C
           domain-containing protein 1 [Pongo abelii]
          Length = 1025

 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 71.2 bits (173), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M        K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRHLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|379055827|emb|CCD32417.1| dicer-1, partial [Aphis gossypii]
          Length = 319

 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 52/275 (18%)

Query: 1379 NYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMR 1437
            N+P P+ S IL+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+ +R
Sbjct: 58   NHPGPSPSVILQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLR 117

Query: 1438 QQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG----------------------- 1473
             + VSNL LY+    K     + + +F P   W  P                        
Sbjct: 118  SKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTSLWNM 177

Query: 1474 -VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSYRVL 1530
              LP F + T        + E+ + + K+G       + ++D+E   L    +  +   +
Sbjct: 178  ITLPTFKDPTDK------EIEEVIQQFKVG-------FSNEDLESTPLFVPYNLVTQHSI 224

Query: 1531 SSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGC---PSRPAC---- 1581
              K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    PS P      
Sbjct: 225  PDKSIADCVEALIGAYLISCGARGALLFMSWLGIKVLPSLDCSKLGYLKPPSSPLLRNVH 284

Query: 1582 VPESVLRSV--DFHALEDALKIKFKDRGLLVEAIT 1614
             PE  L  +   F + E  L   F+DR  L++A+T
Sbjct: 285  NPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMT 319



 Score = 42.0 bits (97), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             ++++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+
Sbjct: 65   SVILQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122

Query: 1667 NENFARVA 1674
            N N  R+ 
Sbjct: 123  NLNLYRLG 130


>gi|326429449|gb|EGD75019.1| hypothetical protein PTSG_07244 [Salpingoeca sp. ATCC 50818]
          Length = 2864

 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 131/539 (24%), Positives = 226/539 (41%), Gaps = 56/539 (10%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ  + +Q   KNT+  L TG GKT IA +++     +  R       VF+ P  PLV
Sbjct: 28  RSYQFSMTKQCLLKNTLVTLPTGLGKTFIAAVVM----YNFYRWYPTGKVVFMAPTKPLV 83

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ +      G+     C EM  +   A R ++ +  K+V  +TA++L N LR      
Sbjct: 84  AQQVQACFRIMGFDREDVC-EMTGNKRPALR-KKLWHQKRVFFLTAEVLQNDLRRGSCPA 141

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
           +A   L+ DE H A+  H Y  V+       S  +R  + G++A+P +      Q+   +
Sbjct: 142 KAFVCLVADEAHRALGNHAYCNVVEVL---CSHTERLRIIGLSATPGDTIATVQQIITNL 198

Query: 485 KICNLESKLDSV--VCTIKDRKELEKHVPMPSEVVVEYDKAASLWSLHEQLKQMEVAVEE 542
           +I ++E + +S   +    +++++E  V  PS  V E+        L   L ++  A   
Sbjct: 199 RISHIELRSESSIDIRPYTNQRKVELVVIKPSGEVSEFQPTIDKM-LGTFLDRLTRARAI 257

Query: 543 AAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGELGQW 602
              + S+ S +  + ARD   +           +   +G   +   L      L   G  
Sbjct: 258 RKMNPSKVSSFALLKARDLFRRGNTATSAAYVHQCVVEGDFAMAISLAYSCTMLRTHGVT 317

Query: 603 CAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVDSEN 662
             Y+   S+L   +N  R   Q+  K  +  ++ V  L +  +VEGA+   D + V   +
Sbjct: 318 PFYRSITSYLNGEKN-PRLGQQM--KKSQEVMNMVAKLKK--IVEGAI---DTRAV--FD 367

Query: 663 GFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY----QH 718
           G V              S +  G      + G         PK++ L +I+ K+    +H
Sbjct: 368 GCV--------------SSLCVGPPSCCRLYG--------HPKLEKLEEIVTKHFRETKH 405

Query: 719 TEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH-----NNSQEMRTFQMQETI 773
            +D R I+F     + + +  V  +   L  ++ AS +G       + +  +  +    +
Sbjct: 406 -KDTRVIVFSSYRDSVVDIVNVLGKHKPL--IRVASFVGQASGKSKSKKGQKQSEQIAVV 462

Query: 774 AKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMI 832
           + FR G    LVAT V EEGLDI   +++I FD   +    IQ  GR  +  +  I+ +
Sbjct: 463 SNFRAGVHNTLVATCVGEEGLDIGHVDLIICFDSKGSSTRLIQRMGRTGRKRNGRIVQL 521


>gi|349605522|gb|AEQ00731.1| Interferon-induced helicase C domain-containing protein 1-like
           protein, partial [Equus caballus]
          Length = 530

 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 79/131 (60%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           I+  Y  TE+  R IIF +   +A  L +   E    + V  K+  LIG  +S E +   
Sbjct: 212 IMEHYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 271

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 272 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 331

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 332 STYVLVAHSGS 342


>gi|11344594|gb|AAG34368.1|AF095844_1 melanoma differentiation associated protein-5 [Homo sapiens]
          Length = 1025

 Score = 94.4 bits (233), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 8/138 (5%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN--LSHAT 841
           S Y+L+   G+  + H T
Sbjct: 828 STYVLVAHSGSGVIEHET 845



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|148670595|gb|EDL02542.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
           CRA_a [Mus musculus]
          Length = 609

 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++G   A G   PK++ L +ILLK +      R IIF      A  L     + P L  V
Sbjct: 268 VLGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTV 327

Query: 751 --KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             K   LIG  N   S  M     QE I +FRDG ++LLVATSVAEEGLDI QCNVV+R+
Sbjct: 328 GIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRY 387

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
            L    ++ +Q+RGRAR   S Y  +   G          +R  +  L  EA+E
Sbjct: 388 GLLTNEISMVQARGRARAGQSVYSFLATEG----------SREMKRELTNEALE 431



 Score = 47.0 bits (110), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 33/201 (16%)

Query: 405 VLVMTAQILLNILRHS----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--E 458
           +L+ TA++L   L  S     +++   +L+++DECHH  K   Y+ ++S +     K  E
Sbjct: 30  LLICTAELLQLALNSSEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAE 89

Query: 459 KRPSVFGMTASPVNLKGVSSQVDCAI-KICNLESKLDSVVCTIKDRK----ELEKHVPMP 513
             P V G+TASP    G ++++  AI  I  L + LD+  C I   K    +L  H P P
Sbjct: 90  PLPQVLGLTASPGT--GGATKLQGAIDHILQLCANLDT--CHIMSPKNCYSQLLMHNPKP 145

Query: 514 SEVVVEYDKAAS-------------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARD 560
            +   +YD                 +  +H+QL+  ++  +   Q   ++       A +
Sbjct: 146 CK---QYDLCQRRAQDPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAE 202

Query: 561 AGAKEELRQVYGVSERTESDG 581
           AG +E+  +VY +  R  +D 
Sbjct: 203 AGLQEQ--RVYALHLRRYNDA 221


>gi|27886568|ref|NP_071451.2| interferon-induced helicase C domain-containing protein 1 [Homo
           sapiens]
 gi|134047802|sp|Q9BYX4.3|IFIH1_HUMAN RecName: Full=Interferon-induced helicase C domain-containing
           protein 1; AltName: Full=Clinically amyopathic
           dermatomyositis autoantigen 140 kDa; Short=CADM-140
           autoantigen; AltName: Full=Helicase with 2 CARD domains;
           Short=Helicard; AltName: Full=Interferon-induced with
           helicase C domain protein 1; AltName: Full=Melanoma
           differentiation-associated protein 5; Short=MDA-5;
           AltName: Full=Murabutide down-regulated protein;
           AltName: Full=RIG-I-like receptor 2; Short=RLR-2;
           AltName: Full=RNA helicase-DEAD box protein 116
          Length = 1025

 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 8/138 (5%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN--LSHAT 841
           S Y+L+   G+  + H T
Sbjct: 828 STYVLVAHSGSGVIEHET 845



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|62988819|gb|AAY24206.1| unknown [Homo sapiens]
          Length = 589

 Score = 94.4 bits (233), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 8/138 (5%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    + V  K+  LIG  +S E +   
Sbjct: 272 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 331

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 332 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 391

Query: 826 SDYILMIERGN--LSHAT 841
           S Y+L+   G+  + H T
Sbjct: 392 STYVLVAHSGSGVIEHET 409



 Score = 41.2 bits (95), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 14/90 (15%)

Query: 427 INLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-----------PSVFGMTASPVNLKG 475
            +L+I+DECHH  K+  Y+ +M  +     K  R           P + G+TASP  + G
Sbjct: 1   FSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQILGLTASP-GVGG 59

Query: 476 VSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
            + Q      I  L + LD+   TIK  KE
Sbjct: 60  ATKQAKAEEHILKLCANLDAF--TIKTVKE 87


>gi|148670597|gb|EDL02544.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
           CRA_c [Mus musculus]
          Length = 533

 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 81/151 (53%), Gaps = 6/151 (3%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++G   A G   PK++ L +ILLK +      R IIF      A  L     + P L  V
Sbjct: 337 VLGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTV 396

Query: 751 --KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             K   LIG  N   S  M     QE I +FRDG ++LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 GIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
            L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 457 GLLTNEISMVQARGRARAGQSVYSFLATEGS 487



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 48/306 (15%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQ--DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q AE  R      + V    G+MG    F    R      +  +L+ TA++L   L  
Sbjct: 60  VSQHAEEFRRMLDKHWTVTTLSGDMGSRAGFGLMAR------SHDLLICTAELLQLALNS 113

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNL 473
           S     +++   +L+++DECHH  K   Y+ ++S +     K  E  P V G+TASP   
Sbjct: 114 SEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDSVVCTIKDRK----ELEKHVPMPSEVVVEYDKAAS--- 525
            G ++++  AI  I  L + LD+  C I   K    +L  H P P +   +YD       
Sbjct: 173 -GGATKLQGAIDHILQLCANLDT--CHIMSPKNCYSQLLMHNPKPCK---QYDLCQRRAQ 226

Query: 526 ----------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
                     +  +H+QL+  ++  +   Q   ++       A +AG +E+  +VY +  
Sbjct: 227 DPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQ--RVYALHL 284

Query: 576 RTESDG 581
           R  +D 
Sbjct: 285 RRYNDA 290


>gi|296202918|ref|XP_002748670.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 2
           [Callithrix jacchus]
          Length = 661

 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 97/178 (54%), Gaps = 9/178 (5%)

Query: 687 EHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELP 745
           +H D++   A   G   PK++ L KIL K ++ ++  R IIF     +A  L     + P
Sbjct: 316 DHKDMLAHLAT-HGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQP 374

Query: 746 SLSFV--KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCN 800
            L  V  +   LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCN
Sbjct: 375 GLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCN 434

Query: 801 VVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           VV+R+ L    ++ +Q+RGRAR   S Y  +  +G+      L N   + ETL ++A+
Sbjct: 435 VVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN--EALETLMEQAV 490



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + R     L+  +    +  L  +   
Sbjct: 4   RPYQQEVITPALEGKNIIIWLPTGAGKTRAAAYVAR---QHLETVDGAKFSRMLDGR--- 57

Query: 364 VYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL---- 417
                        + +    G+MG    F    R         +L+ TA++L   L    
Sbjct: 58  -------------WTMTTLSGDMGPRAAFGHLAR------CHDLLICTAKLLQMALTSPE 98

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNLKG 475
               +++ A +L+++DECHH  K   Y+++MS++     +  R  P V G+TASP    G
Sbjct: 99  EEEHVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARPLPQVLGLTASPGT--G 156

Query: 476 VSSQVDCAIK-ICNLESKLDSVVCTIKDR--KELEKHVPMPSEVVVEYD 521
            +S++D AI  +  L + LD+   T       +L++H   P +   +YD
Sbjct: 157 GASKLDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCK---QYD 202


>gi|390463706|ref|XP_003733083.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Callithrix
           jacchus]
          Length = 578

 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 97/178 (54%), Gaps = 9/178 (5%)

Query: 687 EHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELP 745
           +H D++   A   G   PK++ L KIL K ++ ++  R IIF     +A  L     + P
Sbjct: 326 DHKDMLAHLAT-HGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQP 384

Query: 746 SLSFV--KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCN 800
            L  V  +   LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCN
Sbjct: 385 GLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCN 444

Query: 801 VVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           VV+R+ L    ++ +Q+RGRAR   S Y  +  +G+      L N   + ETL ++A+
Sbjct: 445 VVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN--EALETLMEQAV 500



 Score = 64.7 bits (156), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 36/231 (15%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + R           + L      KV L
Sbjct: 4   RPYQQEVITPALEGKNIIIWLPTGAGKTRAAAYVAR-----------QHLETVDGAKVHL 52

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E         + +    G+MG    F    R         +L+ TA++L   L  
Sbjct: 53  VTQHGEEFSRMLDGRWTMTTLSGDMGPRAAFGHLAR------CHDLLICTAKLLQMALTS 106

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS++     +  R  P V G+TASP   
Sbjct: 107 PEEEEHVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARPLPQVLGLTASPGT- 165

Query: 474 KGVSSQVDCAIK-ICNLESKLDSVVCTIKDR--KELEKHVPMPSEVVVEYD 521
            G +S++D AI  +  L + LD+   T       +L++H   P +   +YD
Sbjct: 166 -GGASKLDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCK---QYD 212


>gi|114052719|ref|NP_001040588.1| interferon-induced helicase C domain-containing protein 1 [Macaca
           mulatta]
 gi|113201795|gb|ABI33114.1| melanoma differentiation associated protein-5 [Macaca mulatta]
 gi|355750574|gb|EHH54901.1| hypothetical protein EGM_04004 [Macaca fascicularis]
 gi|383412295|gb|AFH29361.1| interferon-induced helicase C domain-containing protein 1 [Macaca
           mulatta]
 gi|387540852|gb|AFJ71053.1| interferon-induced helicase C domain-containing protein 1 [Macaca
           mulatta]
          Length = 1025

 Score = 94.0 bits (232), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFKPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQMLGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|366089293|ref|ZP_09455766.1| ribonuclease III [Lactobacillus acidipiscis KCTC 13900]
          Length = 234

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 109/223 (48%), Gaps = 37/223 (16%)

Query: 1595 LEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D   I FK++ LL EA THAS     P   +  Y+R+EF+GDAV+   ++++LF  Y 
Sbjct: 9    LKDDFGIDFKNQNLLDEAFTHASYVNEHPKENLKFYERIEFLGDAVMQLCVSEYLFKRYD 68

Query: 1651 NLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKPGF 1710
             +P G+L+ LRAA V  ++F++ A +     ++R G        R               
Sbjct: 69   TMPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKADAR--------------- 113

Query: 1711 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSV--VWQVFQPLLDPMVTPETLPMHPV 1768
                    K P +L DI E+  GA++LD G+   V  + QV  P LD M   +    H  
Sbjct: 114  --------KRPSLLCDIFEAFIGALYLDQGKSVVVDFISQVVFPKLD-MGWFDHFFDHKT 164

Query: 1769 RELQERCQQQAE-GLEYK-ASRSG----NLATVEVYIDGVQVG 1805
             ELQE  Q+  E  +EYK  ++ G     L  + VY +G Q+G
Sbjct: 165  -ELQEYLQKDGECSIEYKLVNQEGPDNERLYRMAVYANGEQLG 206



 Score = 47.0 bits (110), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 1370 LAIQLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLF 1422
            L   LKD          +L EA T AS       +    YER E LGDA ++  VS +LF
Sbjct: 5    LTKHLKDDFGIDFKNQNLLDEAFTHASYVNEHPKENLKFYERIEFLGDAVMQLCVSEYLF 64

Query: 1423 LKYPQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
             +Y    EG+L+R+R  MV      ++A       YI+
Sbjct: 65   KRYDTMPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIR 102


>gi|74142314|dbj|BAE31919.1| unnamed protein product [Mus musculus]
          Length = 672

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++G   A G   PK++ L +ILLK +      R IIF      A  L     + P L  V
Sbjct: 337 VLGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTV 396

Query: 751 --KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             K   LIG  N   S  M     QE I +FRDG ++LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 GIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
            L    ++ +Q+RGRAR   S Y  +   G          +R  +  L  EA+E
Sbjct: 457 GLLTNEISMVQARGRARAGQSVYSFLATEG----------SREMKRELTNEALE 500



 Score = 71.6 bits (174), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 48/306 (15%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQ--DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q AE  R      + V    G+MG    F    R      +  +L+ TA++L   L  
Sbjct: 60  VSQHAEEFRRMLDKHWTVTTLSGDMGSRAGFGLMAR------SHDLLICTAELLQLALNS 113

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNL 473
           S     +++   +L+++DECHH  K   Y+ ++S +     K  E  P V G+TASP   
Sbjct: 114 SEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDSVVCTIKDRK----ELEKHVPMPSEVVVEYDKAAS--- 525
            G ++++  AI  I  L + LD+  C I   K    +L  H P P +   +YD       
Sbjct: 173 -GGATKLQGAIDHILQLCANLDT--CHIMSPKNCYSQLLMHNPKPCK---QYDLCQRRAQ 226

Query: 526 ----------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
                     +  +H+QL+  ++  +   Q   ++       A +AG +E+  +VY +  
Sbjct: 227 DPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQ--RVYALHL 284

Query: 576 RTESDG 581
           R  +D 
Sbjct: 285 RRYNDA 290


>gi|355564928|gb|EHH21417.1| hypothetical protein EGK_04479 [Macaca mulatta]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    + V  K+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.0 bits (175), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFKPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQMLGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|12621066|gb|AAG54076.1| RNA helicase-DEAD box protein RH116 [Homo sapiens]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   + +I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSFIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|410220348|gb|JAA07393.1| interferon induced with helicase C domain 1 [Pan troglodytes]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|84627487|gb|AAI11751.1| Interferon induced with helicase C domain 1 [Homo sapiens]
 gi|119631757|gb|EAX11352.1| interferon induced with helicase C domain 1 [Homo sapiens]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.8 bits (177), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|119586186|gb|EAW65782.1| Fanconi anemia, complementation group M, isoform CRA_b [Homo
           sapiens]
          Length = 2083

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 233/556 (41%), Gaps = 78/556 (14%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ E   +  G    H     G     A   +  + +K+VL +T Q+++N L      
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGS--TQASTRKEIWCSKRVLFLTPQVMVNDLSRGACP 204

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV-D 481
              I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V   + +
Sbjct: 205 AAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAVQQVITN 261

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKH-VPMPSEV-VVEYDKAASLWSLHEQLKQMEVA 539
             I    L S+    + T    +++EK  VP+  E+  ++      L S    L Q  V 
Sbjct: 262 LLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVL 321

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL--- 596
           +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L   
Sbjct: 322 MR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISLYHG 370

Query: 597 GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +  +
Sbjct: 371 YELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECMFARTRSTSAN 429

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
                        G + I++G+     V S                   PK++ L ++++
Sbjct: 430 -------------GISAIQQGDKNKKFVYSH------------------PKLKKLEEVVI 458

Query: 715 KY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           ++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH + + 
Sbjct: 459 EHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHASGKS 516

Query: 764 MRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
            + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR
Sbjct: 517 TKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGR 576

Query: 821 A-RKPGSDYILMIERG 835
             RK     ++++  G
Sbjct: 577 TGRKRQGRIVIILSEG 592


>gi|426337537|ref|XP_004032759.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Gorilla gorilla gorilla]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|402888490|ref|XP_003907593.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1-like [Papio anubis]
          Length = 837

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 520 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 579

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 580 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 639

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 640 STYVLVAHSGS 650



 Score = 72.0 bits (175), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 116 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 175

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 176 NKVLLVEQ---LFRKEFKPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 231

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 232 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 291

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 292 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 335


>gi|397500570|ref|XP_003820983.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Pan paniscus]
          Length = 1025

 Score = 94.0 bits (232), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 828 STYVLVAHSGS 838



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 364 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 480 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 523


>gi|296202916|ref|XP_002748669.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 isoform 1
           [Callithrix jacchus]
          Length = 678

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 97/178 (54%), Gaps = 9/178 (5%)

Query: 687 EHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELP 745
           +H D++   A   G   PK++ L KIL K ++ ++  R IIF     +A  L     + P
Sbjct: 333 DHKDMLAHLA-THGLENPKLEMLEKILQKQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQP 391

Query: 746 SLSFV--KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCN 800
            L  V  +   LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCN
Sbjct: 392 GLQTVDIRPQLLIGSGNSSQRTHMTQKDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCN 451

Query: 801 VVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           VV+R+ L    ++ +Q+RGRAR   S Y  +  +G+      L N   + ETL ++A+
Sbjct: 452 VVVRYGLLTNEISMVQARGRARAGESVYSFVATKGSRELQRELIN--EALETLMEQAV 507



 Score = 68.6 bits (166), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 29/231 (12%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + R     +         V LV +V L
Sbjct: 4   RPYQQEVITPALEGKNIIIWLPTGAGKTRAAAYVARQHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E         + +    G+MG    F    R         +L+ TA++L   L  
Sbjct: 60  VTQHGEEFSRMLDGRWTMTTLSGDMGPRAAFGHLAR------CHDLLICTAKLLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS++     +  R  P V G+TASP   
Sbjct: 114 PEEEEHVELTAFSLIVVDECHHTHKDTVYNIIMSQYLELKLQRARPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAIK-ICNLESKLDSVVCTIKDR--KELEKHVPMPSEVVVEYD 521
            G +S++D AI  +  L + LD+   T       +L++H   P +   +YD
Sbjct: 173 -GGASKLDGAINHVLQLCANLDTWCITSPQNCFPQLQEHNQQPCK---QYD 219


>gi|291391627|ref|XP_002712267.1| PREDICTED: interferon induced with helicase C domain 1 [Oryctolagus
           cuniculus]
          Length = 1022

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 6/126 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 705 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 764

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CNV+IR+ L    +A +Q+RGRAR   
Sbjct: 765 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNVIIRYGLVTNEIAMVQARGRARADE 824

Query: 826 SDYILM 831
           S YIL+
Sbjct: 825 STYILV 830



 Score = 77.0 bits (188), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q R YQ++V + A + KN I  L TG+GKT +AV + +   +  ++++     + LV
Sbjct: 304 PELQLRSYQMEVAQPALEGKNIIICLPTGSGKTRVAVFIAKDHLDKKKKESNPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KVPLV Q   + R++    +  +   +G    D Q    +     +  V++ TAQIL N
Sbjct: 364 NKVPLVEQ---LFRKEFKPFLKKWYRVIGLS-GDTQLKISFPEVVKSHDVIISTAQILEN 419

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +LLI+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 420 SLLNFENGEDAGVQLSDFSLLIIDECHHTNKEAVYNNIMRRYLKQKLKNNRLKKENKPVI 479

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  + + LD+   TIK  KE
Sbjct: 480 ALPQILGLTASP-GVGGANKQAKAEEHILKICANLDAF--TIKTVKE 523


>gi|21752288|dbj|BAC04159.1| unnamed protein product [Homo sapiens]
          Length = 669

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 229/551 (41%), Gaps = 68/551 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVM----YNFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ E   +  G    H     G     A   +  + +K+VL +T Q+++N L      
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGST--QASTRKEIWCSKRVLFLTPQVMVNDLSRGACP 204

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV-D 481
              I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V   + +
Sbjct: 205 AAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAVQQVITN 261

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKH-VPMPSEV-VVEYDKAASLWSLHEQLKQMEVA 539
             I    L S+    + T    +++EK  VP+  E+  ++      L S    L Q  V 
Sbjct: 262 LLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVL 321

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +    +     +K+Q + ARD   K     + G+ +    +G   +   L      L ++
Sbjct: 322 MR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQGI-IEGEFAICISLYHGYELLQQM 377

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G    Y      +   +   R+  +L     E ++ K+ + L+C       +  +     
Sbjct: 378 GMRSLYFFLCGIMDGTKGMTRSKNELGRN--EDFM-KLYNHLECMFARTRSTSAN----- 429

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY--- 716
                   G + I++G+     V S                   PK++ L ++++++   
Sbjct: 430 --------GISAIQQGDKNKKFVYS------------------HPKLKKLEEVVIEHFKS 463

Query: 717 --------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQ 768
                   +  ++ R +IF     +   + ++ ++   +  ++  + +GH + +  + F 
Sbjct: 464 WNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHASGKSTKGFT 521

Query: 769 MQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR-ARKP 824
            +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR  RK 
Sbjct: 522 QKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKR 581

Query: 825 GSDYILMIERG 835
               ++++  G
Sbjct: 582 QGRIVIILSEG 592


>gi|149730873|ref|XP_001494380.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Equus caballus]
          Length = 1022

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 79/131 (60%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+  Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 704 IMEHYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 763

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 764 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 823

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 824 STYVLVAHSGS 834



 Score = 77.0 bits (188), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 25/224 (11%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQ++V + A + KN I  L TG+GKT +AV + +   +  +  ++    + LV
Sbjct: 304 PELHLRPYQMEVAQPALEGKNVIICLPTGSGKTRVAVYVTKDHLDKKKETSEPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY--CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNI 416
            KVPLV Q   + R++    +  +     +  D      +     +  V++ TAQIL N 
Sbjct: 364 NKVPLVEQ---LFRKEFNPFLKKWYRITRLSGDTQLKISFPEVVKSHDVIISTAQILENS 420

Query: 417 LRHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---------- 460
           L +S       + +   +L+I+DECHH  K+  Y+ +M  +     K  R          
Sbjct: 421 LLNSEKGEDAGVVLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNRLKKENKPVIP 480

Query: 461 -PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKD 502
            P + G+TASP  + G + Q      I  + + LD SV+ T+K+
Sbjct: 481 LPQILGLTASP-GVGGATKQAKAEEHILKICANLDASVIKTVKE 523


>gi|157817529|ref|NP_001100115.1| probable ATP-dependent RNA helicase DDX58 [Rattus norvegicus]
 gi|149045628|gb|EDL98628.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 (predicted) [Rattus
           norvegicus]
          Length = 598

 Score = 94.0 bits (232), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 18/248 (7%)

Query: 290 GKKSEAKEKMPEEQARP--YQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQ 346
           G  SEA         +P  YQL++   AKK KNT+    TG GKT +++L+      +  
Sbjct: 228 GPPSEASPNNSHSPLKPRNYQLELALPAKKGKNTVICAPTGCGKTFVSLLICEHHLKNFP 287

Query: 347 RQNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTK 403
              +K   VF   ++P+  QQA V     E+ GY V    G       D    Q   +  
Sbjct: 288 -HGQKGKVVFFANQIPVYEQQATVFSRYFERFGYNVAGISGATA----DNVSVQHIIENN 342

Query: 404 QVLVMTAQILLNILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEK 459
            ++++T QIL+N L + +I  +    L+I DECH+  K HPY+ +M  +       S + 
Sbjct: 343 DIVILTPQILVNSLNNGAIPSLSVFTLMIFDECHNTSKHHPYNQIMFRYLDHKLGGSPDP 402

Query: 460 RPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEVV 517
            P V G+TAS V +    +  +  + IC L + LD SV+ T++D  +ELE+ V  P ++ 
Sbjct: 403 LPQVIGLTAS-VGVGDAKTVEEAMLHICKLCAALDASVIATVRDNVEELEQVVYKPQKIS 461

Query: 518 VEYDKAAS 525
            + +  AS
Sbjct: 462 RKVESRAS 469


>gi|13194586|gb|AAK15474.1| unknown [Mus musculus]
 gi|13194588|gb|AAK15475.1| unknown [Mus musculus]
 gi|20809730|gb|AAH29209.1| DEXH (Asp-Glu-X-His) box polypeptide 58 [Mus musculus]
 gi|148670596|gb|EDL02543.1| DNA segment, Chr 11, Lothar Hennighausen 2, expressed, isoform
           CRA_b [Mus musculus]
          Length = 678

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++G   A G   PK++ L +ILLK +      R IIF      A  L     + P L  V
Sbjct: 337 VLGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTV 396

Query: 751 --KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             K   LIG  N   S  M     QE I +FRDG ++LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 GIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
            L    ++ +Q+RGRAR   S Y  +   G          +R  +  L  EA+E
Sbjct: 457 GLLTNEISMVQARGRARAGQSVYSFLATEG----------SREMKRELTNEALE 500



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 48/306 (15%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQ--DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q AE  R      + V    G+MG    F    R      +  +L+ TA++L   L  
Sbjct: 60  VSQHAEEFRRMLDKHWTVTTLSGDMGSRAGFGLMAR------SHDLLICTAELLQLALNS 113

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNL 473
           S     +++   +L+++DECHH  K   Y+ ++S +     K  E  P V G+TASP   
Sbjct: 114 SEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDSVVCTIKDRK----ELEKHVPMPSEVVVEYDKAAS--- 525
            G ++++  AI  I  L + LD+  C I   K    +L  H P P +   +YD       
Sbjct: 173 -GGATKLQGAIDHILQLCANLDT--CHIMSPKNCYSQLLMHNPKPCK---QYDLCQRRAQ 226

Query: 526 ----------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
                     +  +H+QL+  ++  +   Q   ++       A +AG +E+  +VY +  
Sbjct: 227 DPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQ--RVYALHL 284

Query: 576 RTESDG 581
           R  +D 
Sbjct: 285 RRYNDA 290


>gi|70608133|ref|NP_084426.2| probable ATP-dependent RNA helicase DHX58 [Mus musculus]
 gi|341940441|sp|Q99J87.2|DHX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName:
           Full=Probable ATP-dependent helicase LGP2; AltName:
           Full=Protein D11Lgp2; AltName: Full=RIG-I-like receptor
           3; Short=RLR-3; AltName: Full=RIG-I-like receptor Lgp2;
           Short=RLR
          Length = 678

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++G   A G   PK++ L +ILLK +      R IIF      A  L     + P L  V
Sbjct: 337 VLGQLAARGPENPKLEMLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQTV 396

Query: 751 --KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             K   LIG  N   S  M     QE I +FRDG ++LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 GIKPQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
            L    ++ +Q+RGRAR   S Y  +   G          +R  +  L  EA+E
Sbjct: 457 GLLTNEISMVQARGRARAGQSVYSFLATEG----------SREMKRELTNEALE 500



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 48/306 (15%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     + R       V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIIWLPTGAGKTRAAAFVAKRHLETVDRGK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMGQ--DFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q AE  R      + V    G+MG    F    R      +  +L+ TA++L   L  
Sbjct: 60  VSQHAEEFRRMLDKHWTVTTLSGDMGSRAGFGLMAR------SHDLLICTAELLQLALNS 113

Query: 420 S----IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNL 473
           S     +++   +L+++DECHH  K   Y+ ++S +     K  E  P V G+TASP   
Sbjct: 114 SEEDEHVELREFSLIVVDECHHTHKDTVYNTILSRYLEQKLKKAEPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDSVVCTIKDRK----ELEKHVPMPSEVVVEYDKAAS--- 525
            G ++++  AI  I  L + LD+  C I   K    +L  H P P +   +YD       
Sbjct: 173 -GGATKLQGAIDHILQLCANLDT--CHIMSPKNCYSQLLMHNPKPCK---QYDLCQRRAQ 226

Query: 526 ----------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSE 575
                     +  +H+QL+  ++  +   Q   ++       A +AG +E+  +VY +  
Sbjct: 227 DPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQ--RVYALHL 284

Query: 576 RTESDG 581
           R  +D 
Sbjct: 285 RRYNDA 290


>gi|23273574|gb|AAH36056.1| FANCM protein [Homo sapiens]
 gi|119586188|gb|EAW65784.1| Fanconi anemia, complementation group M, isoform CRA_d [Homo
           sapiens]
 gi|325463111|gb|ADZ15326.1| Fanconi anemia, complementation group M [synthetic construct]
          Length = 669

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 121/551 (21%), Positives = 229/551 (41%), Gaps = 68/551 (12%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVM----YNFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ E   +  G    H     G     A   +  + +K+VL +T Q+++N L      
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGST--QASTRKEIWCSKRVLFLTPQVMVNDLSRGACP 204

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV-D 481
              I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V   + +
Sbjct: 205 AAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAVQQVITN 261

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKH-VPMPSEV-VVEYDKAASLWSLHEQLKQMEVA 539
             I    L S+    + T    +++EK  VP+  E+  ++      L S    L Q  V 
Sbjct: 262 LLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVL 321

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYALGEL 599
           +    +     +K+Q + ARD   K     + G+ +    +G   +   L      L ++
Sbjct: 322 MR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQGI-IEGEFAICISLYHGYELLQQM 377

Query: 600 GQWCAYKVAQSFLTALQNDERANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKDAKVVD 659
           G    Y      +   +   R+  +L     E ++ K+ + L+C       +  +     
Sbjct: 378 GMRSLYFFLCGIMDGTKGMTRSKNELGRN--EDFM-KLYNHLECMFARTRSTSAN----- 429

Query: 660 SENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLKY--- 716
                   G + I++G+     V S                   PK++ L ++++++   
Sbjct: 430 --------GISAIQQGDKNKKFVYS------------------HPKLKKLEEVVIEHFKS 463

Query: 717 --------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQEMRTFQ 768
                   +  ++ R +IF     +   + ++ ++   +  ++  + +GH + +  + F 
Sbjct: 464 WNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHASGKSTKGFT 521

Query: 769 MQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR-ARKP 824
            +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR  RK 
Sbjct: 522 QKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKR 581

Query: 825 GSDYILMIERG 835
               ++++  G
Sbjct: 582 QGRIVIILSEG 592


>gi|350596885|ref|XP_003484332.1| PREDICTED: probable ATP-dependent RNA helicase DDX58-like, partial
           [Sus scrofa]
          Length = 624

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 25/282 (8%)

Query: 282 NQECNGKVGKKSEAKEKMPEEQARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRS 340
           NQ  +      SEA       + R YQL++   A+  KNTI    TG GKT +++L+   
Sbjct: 228 NQNLSQNSCSSSEAPHTYSPLKPRKYQLELALPAQNGKNTIICAPTGCGKTFVSLLICEH 287

Query: 341 ICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQ 397
                 R  +K   VF   ++P+  QQ  V     E+ GY V    G       D    +
Sbjct: 288 HLKKFPR-GRKGKVVFFAIQLPVYEQQKSVFSKHFERLGYKVAGISGATS----DTVCVE 342

Query: 398 REFDTKQVLVMTAQILLNILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT- 455
           +  +   ++++T QIL+N L +  I  +    L+I DECH+  K+HPY+++M  +     
Sbjct: 343 QIVENNDIIILTPQILVNCLTNGTIPSLSVFTLMIFDECHNTSKQHPYNVIMFNYLDRKL 402

Query: 456 --SKEKRPSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVP 511
             S +  P V G+TAS V +    ++ +    IC L + LD SV+ T++D  +ELE    
Sbjct: 403 GGSSDSLPQVIGLTAS-VGVGDAKNKAEATEYICKLCASLDTSVIATVRDNLEELE---- 457

Query: 512 MPSEVVVEYDKAASLWSLHEQLKQMEVAVEEAAQSSSRRSKW 553
              EVV  Y    S  SL  ++   +++ E   Q    +  W
Sbjct: 458 ---EVV--YKPQKSQASLEHRVCSFQLSAEHGPQQVKSKLLW 494


>gi|332234337|ref|XP_003266368.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Nomascus leucogenys]
          Length = 976

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 659 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 718

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 719 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 778

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 779 STYVLVAHSGS 789



 Score = 70.9 bits (172), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 255 PELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 314

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 315 NKVLLVEQ---LFRKEFKPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 370

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 371 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 430

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 431 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 474


>gi|332814684|ref|XP_003309348.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Pan troglodytes]
          Length = 1024

 Score = 93.6 bits (231), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 707 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 766

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 767 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 826

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 827 STYVLVAHSGS 837



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 303 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 362

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N
Sbjct: 363 NKVLLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILEN 418

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R         
Sbjct: 419 SLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLMQKLKNNRLKKENKPVI 478

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 479 PLPQILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 522


>gi|295148218|ref|NP_001171151.1| Fanconi anemia, complementation group M [Xenopus laevis]
 gi|223929916|gb|ACN24616.1| Fanconi anemia protein [Xenopus laevis]
          Length = 2166

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 221/552 (40%), Gaps = 73/552 (13%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ ++   A  +NT+  L TG GKT IA +++     +  R       VF+ P  PLV
Sbjct: 194 RDYQFNISYTALLQNTLVCLPTGLGKTFIAAVVMY----NFYRWYPSGKIVFMAPTKPLV 249

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQ E      G   GH     G     AQ  +  ++T +V  +T Q+++N L       
Sbjct: 250 AQQIEACFRVMGIPQGHMAEMTGS--TQAQNRKNIWETHRVFFLTPQVMVNDLTRGACPA 307

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKGVSSQVDCAI 484
             I  L++DE H A+  H Y  V+ E  + T++ +   +  ++A+P        QV   +
Sbjct: 308 LEIKCLVIDEAHKALGNHAYCQVVRELTNYTNQFR---ILALSATPGGDTKSVQQVVSNL 364

Query: 485 KICNLE--SKLDSVVCTIKDRKELEKH-VPMPSEV-VVEYDKAASLWSLHEQLKQMEVAV 540
            I  +E  S+  S +      ++LEK  VP+  E+  V+      L +   +L Q  V  
Sbjct: 365 LISQIELRSEDSSDIQPYSHARQLEKFVVPLGEELESVQKTYLQLLDTFAGRLIQNNVL- 423

Query: 541 EEAAQSSSRR-----SKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYA 595
                  SRR     +K+Q + +RD   K     + G  +    +G   L   L      
Sbjct: 424 -------SRRDIPNLTKYQIILSRDQFRKNPPANIIGAQQGV-IEGDYALCISLYHGYEL 475

Query: 596 LGELGQWCAYKVAQSFLTALQNDERANYQL--DVKFQESY--LSKVVSLLQCELVEGAVS 651
           L ++G    Y      +   +   RA  +L  +  F E Y  L K+ S  +     G++ 
Sbjct: 476 LLQMGTRSLYSYLHGIIDGSKGMTRARNELSRNGDFMELYKQLEKMFSDTKVAEGNGSLL 535

Query: 652 KKDAKVVDSENGFVEGGTNEIEEGELLDSHVVS-----------GGEHVDVIIGAAVADG 700
              +   D++  F+       +  E++  H  S             E   ++I ++  D 
Sbjct: 536 FNSSLRADAKKPFLYSHPKLKKLEEVVVQHFKSWKNGDQNSSNQTPEGTRIMIFSSFRDS 595

Query: 701 KVTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
                VQ + ++L    H    R + FV    A   + K F +   L  VK         
Sbjct: 596 -----VQEIAEML--NHHHPTVRVMTFVGHSSAGKGV-KGFTQKEQLEVVK--------- 638

Query: 761 SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
                         +FR+G    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR
Sbjct: 639 --------------RFREGGFNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGR 684

Query: 821 ARKPGSDYILMI 832
             +     I++I
Sbjct: 685 TGRKRQGRIVVI 696


>gi|348680026|gb|EGZ19842.1| hypothetical protein PHYSODRAFT_558487 [Phytophthora sojae]
          Length = 2706

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 5/166 (3%)

Query: 305 RPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPLV 364
           R YQ+++   A  +NTI +L TG GKTL+A+     +  +++  N   L VF VP  PLV
Sbjct: 222 RRYQVELTLSALLENTIVYLPTGCGKTLVAI----KVMEEMKHLNPDKLVVFFVPTGPLV 277

Query: 365 YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKM 424
            QQA  IR ++ + V  + G+ G+         +       +V+T Q  LN+L +    +
Sbjct: 278 SQQAAYIRRESNFQVAEFSGQHGRTTAATSAPIKVDGGFDAVVVTPQYFLNLLFNGRTSI 337

Query: 425 EAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
              + ++ DE HHA   HPY  ++     T     RP +  +TASP
Sbjct: 338 TDYSTMVFDEAHHATGNHPYCELLKNL-ATVDLRVRPHILALTASP 382



 Score = 92.0 bits (227), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 702 VTPKVQSLIKILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNS 761
           ++ +V  +   + K     D RAI+FV R   A+VL K    L  L  +     +GHN+ 
Sbjct: 593 ISNRVHLVADCIRKANFDHDSRAIVFVRRRKTAIVLAKAMESLEVLRELNPTRFVGHNSY 652

Query: 762 QEMRTFQMQE-TIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
           + M   + Q  T+ +FR GR+ LLVAT+V EEGLD+ +C++VI+FD    V + IQSRGR
Sbjct: 653 EGMSWEEEQRPTLDRFRQGRIRLLVATNVLEEGLDVPECSLVIQFDGVVGVTSLIQSRGR 712

Query: 821 ARKPGSDYILM 831
           AR   S +I+ 
Sbjct: 713 ARHRDSSFIIF 723


>gi|74215044|dbj|BAE33508.1| unnamed protein product [Mus musculus]
          Length = 733

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 22/225 (9%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLVPK 360
           R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF   +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFANQ 300

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           +P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N L
Sbjct: 301 IPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVNNL 356

Query: 418 RH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNL 473
            + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V +
Sbjct: 357 NNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-VGV 415

Query: 474 KGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
               +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 416 GDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 460



 Score = 66.6 bits (161), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 610 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 669

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++   TV+  IQ+R
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGTVIKMIQTR 729

Query: 819 GRA 821
           G +
Sbjct: 730 GES 732


>gi|77415358|gb|AAI06096.1| Ddx58 protein, partial [Mus musculus]
          Length = 763

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 22/225 (9%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLVPK 360
           R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF   +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFANQ 300

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           +P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N L
Sbjct: 301 IPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVNNL 356

Query: 418 RH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNL 473
            + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V +
Sbjct: 357 NNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-VGV 415

Query: 474 KGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
               +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 416 GDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 460



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 610 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 669

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+R
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 729

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R   S   L+    ++
Sbjct: 730 GRGRARDSKCFLLTSSADV 748


>gi|74959747|ref|NP_065988.1| Fanconi anemia group M protein [Homo sapiens]
 gi|78099254|sp|Q8IYD8.2|FANCM_HUMAN RecName: Full=Fanconi anemia group M protein; Short=Protein FACM;
           AltName: Full=ATP-dependent RNA helicase FANCM; AltName:
           Full=Fanconi anemia-associated polypeptide of 250 kDa;
           Short=FAAP250; AltName: Full=Protein Hef ortholog
 gi|71912519|gb|AAZ53290.1| Fanconi anemia complementation group M [Homo sapiens]
 gi|119586185|gb|EAW65781.1| Fanconi anemia, complementation group M, isoform CRA_a [Homo
           sapiens]
 gi|162319388|gb|AAI56491.1| Fanconi anemia, complementation group M [synthetic construct]
          Length = 2048

 Score = 93.6 bits (231), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 123/556 (22%), Positives = 233/556 (41%), Gaps = 78/556 (14%)

Query: 304 ARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
            R YQL +   A   NT+  L TG GKT IA +++     +  R       VF+ P  PL
Sbjct: 91  VRDYQLHISRAALFCNTLVCLPTGLGKTFIAAVVMY----NFYRWFPSGKVVFMAPTKPL 146

Query: 364 VYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIK 423
           V QQ E   +  G    H     G     A   +  + +K+VL +T Q+++N L      
Sbjct: 147 VTQQIEACYQVMGIPQSHMAEMTGS--TQASTRKEIWCSKRVLFLTPQVMVNDLSRGACP 204

Query: 424 MEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP-VNLKGVSSQV-D 481
              I  L++DE H A+  + Y  V+ E    T+  +   +  ++A+P  ++K V   + +
Sbjct: 205 AAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR---ILALSATPGSDIKAVQQVITN 261

Query: 482 CAIKICNLESKLDSVVCTIKDRKELEKH-VPMPSEV-VVEYDKAASLWSLHEQLKQMEVA 539
             I    L S+    + T    +++EK  VP+  E+  ++      L S    L Q  V 
Sbjct: 262 LLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQILESFARSLIQRNVL 321

Query: 540 VEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAANLIQKLRAINYAL--- 596
           +    +     +K+Q + ARD   K     + G+ +         +I+   AI  +L   
Sbjct: 322 MR---RDIPNLTKYQIILARDQFRKNPSPNIVGIQQ--------GIIEGEFAICISLYHG 370

Query: 597 GELGQWCAYKVAQSFLTALQNDER--ANYQLDVKFQESYLSKVVSLLQCELVEGAVSKKD 654
            EL Q    +    FL  + +  +     + ++   E ++ K+ + L+C       +  +
Sbjct: 371 YELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFM-KLYNHLECMFARTRSTSAN 429

Query: 655 AKVVDSENGFVEGGTNEIEEGELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILL 714
                        G + I++G+     V S                   PK++ L ++++
Sbjct: 430 -------------GISAIQQGDKNKKFVYSH------------------PKLKKLEEVVI 458

Query: 715 KY-----------QHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQE 763
           ++           +  ++ R +IF     +   + ++ ++   +  ++  + +GH + + 
Sbjct: 459 EHFKSWNAENTTEKKRDETRVMIFSSFRDSVQEIAEMLSQHQPI--IRVMTFVGHASGKS 516

Query: 764 MRTFQMQ---ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGR 820
            + F  +   E + +FRDG    LV+T V EEGLDI + +++I FD  K+ +  +Q  GR
Sbjct: 517 TKGFTQKEQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGR 576

Query: 821 A-RKPGSDYILMIERG 835
             RK     ++++  G
Sbjct: 577 TGRKRQGRIVIILSEG 592


>gi|116283738|gb|AAH27369.1| Ddx58 protein [Mus musculus]
          Length = 763

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 22/225 (9%)

Query: 305 RPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLVPK 360
           R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF   +
Sbjct: 245 RNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFANQ 300

Query: 361 VPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           +P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N L
Sbjct: 301 IPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVNNL 356

Query: 418 RH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPVNL 473
            + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V +
Sbjct: 357 NNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-VGV 415

Query: 474 KGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
               +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 416 GDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 460



 Score = 70.1 bits (170), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 610 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 669

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+R
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 729

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R   S   L+    ++
Sbjct: 730 GRGRARDSKCFLLTSSADV 748


>gi|291235953|ref|XP_002737903.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
           [Saccoglossus kowalevskii]
          Length = 996

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 19/214 (8%)

Query: 319 NTIAFLETGAGKTLIAVLLI-RSICNDLQRQNKKMLA------VFLVPKVPLVYQQAEVI 371
           N+I    TG GKT +A+++  R + N L  Q +K         +FLV ++PL+ Q  + +
Sbjct: 340 NSIICAPTGTGKTHVAMMIAKRHMENALASQARKGFTTSGAKVIFLVHRIPLLNQTYKRL 399

Query: 372 REQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRHSIIKMEAINLLI 431
           +    Y+     G++         +++  +   +++ T  IL N L+H    M   +L+I
Sbjct: 400 KM---YLPLFEIGKLSGASSSNVTFEKLVEINDIIITTTDILKNSLKHGKSSMSTFSLII 456

Query: 432 LDECHHAVKKHPYSLVMSEFYHTT--SKEKRPSVFGMTASPVNLKGVSSQVDCA----IK 485
           +DECHHA+K HPY+++M+++      +K   P + G+TASP    G +S++  A    +K
Sbjct: 457 IDECHHAMKNHPYNIIMAQYLKEKFDNKSSLPQIVGLTASPGT--GSNSELGAARDHILK 514

Query: 486 IC-NLESKLDSVVCTIKDRKELEKHVPMPSEVVV 518
           +C NL++     V   +++ ELEK V  P +V  
Sbjct: 515 LCANLDAGEFVTVKNPRNKAELEKFVTDPDKVTT 548



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 6/124 (4%)

Query: 704 PKVQSLIKILLK--YQHTEDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLIGHNN 760
           PKV +L + L +   +   DFR IIFV+ RV+A+ VL     E   L  ++ + L G   
Sbjct: 681 PKVVALKQALKQEVQEKGNDFRGIIFVKTRVLASAVL-DCIKEDQELQMLRPSRLTGVKT 739

Query: 761 S--QEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
           +  + M   +    + KF DG   LL+ATSVAEEGLDI++C++VIR++ A   ++  Q+R
Sbjct: 740 AGDESMTQAEQDSNLRKFADGDCKLLIATSVAEEGLDIKECHMVIRYNYATNEISMRQAR 799

Query: 819 GRAR 822
           GRAR
Sbjct: 800 GRAR 803


>gi|354485032|ref|XP_003504688.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Cricetulus
           griseus]
          Length = 679

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 90/178 (50%), Gaps = 17/178 (9%)

Query: 688 HVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPS 746
           H D +   A A G   PK++ L  ILLK ++     R IIF     +A  L     + P 
Sbjct: 335 HKDTLAQLA-AHGPENPKLKMLEGILLKQFESPNHPRGIIFTRTRQSAYFLLLWLWQQPC 393

Query: 747 LSFV--KSASLIGHNN---SQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNV 801
           L  V  K+  LIG  N   S  M     QE I +FRDG V LLVATSVAEEGLDI QCNV
Sbjct: 394 LQNVNIKAQMLIGAGNTSQSTHMTQKDQQEVIQEFRDGIVNLLVATSVAEEGLDIAQCNV 453

Query: 802 VIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAIE 859
           V+R+ L    ++ +Q+RGRAR   S Y  +   G          +R  +  L  EA+E
Sbjct: 454 VVRYGLLTNEISMVQARGRARADQSVYSFVATEG----------SRELQRELTNEALE 501



 Score = 63.9 bits (154), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 50/307 (16%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A      + N           V LV +V L
Sbjct: 4   RPYQWEVILPALEGKNIIVWLPTGAGKTRAAAF----VANRHLETVDGGKVVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQIL----LN 415
           V Q AE  R      + +    G+MG    F    R      +  +L+ TA++L    ++
Sbjct: 60  VNQHAEEFRRMLDKRWTMTTLSGDMGPRAGFGLMAR------SHDLLICTAELLQLALIS 113

Query: 416 ILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSK--EKRPSVFGMTASPVNL 473
                 +++   +L+++DECHH  K   Y+ ++S +     +  E+ P V G+TASP   
Sbjct: 114 PEEEEHVELTEFSLIVVDECHHTHKDTVYNNILSRYLEQKLQKAERLPQVLGLTASPGTG 173

Query: 474 KGVSSQ--VDCAIKICNLESKLDSVVCTIKD----RKELEKHVPMPSEVVVEYDKAAS-- 525
           +    Q  +D  +++C   + LD+  C I        +L +H P P +   +YD      
Sbjct: 174 RATKLQGAIDHILQLC---ANLDA--CRIMSPENCHSQLLEHNPKPCK---QYDLCQRRQ 225

Query: 526 -----------LWSLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVS 574
                      +  +H+QL+  E++ +   Q+  ++       A +AG  E  R+++ + 
Sbjct: 226 EDPFGDLLKKLMRQIHQQLEMPELSQQFGTQTYEQQVVELSKAAAEAGFPE--RRIFALH 283

Query: 575 ERTESDG 581
            R  +D 
Sbjct: 284 LRHYNDA 290


>gi|90076976|dbj|BAE88168.1| unnamed protein product [Macaca fascicularis]
          Length = 488

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 7/168 (4%)

Query: 675 GELLDSHVVSGGEHVDVIIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVA 733
           G+LL   +     H +V+   A   G   PK++ L KIL + ++ ++  R IIF     +
Sbjct: 230 GDLLKKLMALFDGHKNVLAHLAT-HGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQS 288

Query: 734 ALVLPKVFAELPSLSFV--KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATS 788
           A  L     + P L  V  ++  LIG  NS +   M     QE I KFRDG + LLVATS
Sbjct: 289 AHSLLLWLQQQPGLQTVDIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATS 348

Query: 789 VAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
           VAEEGLDI QCNVV+R+ L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 349 VAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARADQSVYSFVATEGS 396



 Score = 71.2 bits (173), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 26/225 (11%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKQHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E  R      + V    G+MG    F    R         +L+ TA++L   L  
Sbjct: 60  VTQHGEEFRRMLDGRWTVTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP   
Sbjct: 114 PEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSE 515
            G +S++D AI  +  L + LD+  ++     R  L++H   P +
Sbjct: 173 -GGASKLDGAIDHVLQLCANLDTWCIMSPQNYRPRLQEHSQQPCK 216


>gi|379055845|emb|CCD32426.1| dicer-1a, partial [Acyrthosiphon svalbardicum]
          Length = 319

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 58/281 (20%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 55   DLNDHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 114

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 115  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTL 174

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T      +  Q K             N + ++D+E+  L    +  + 
Sbjct: 175  WNKITLPTFKDPTDKEIEEVIQQFK-------------NGFSNEDVENTPLFVPYNLVTQ 221

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPES 1585
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     
Sbjct: 222  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SP 278

Query: 1586 VLRSVD------------FHALEDALKIKFKDRGLLVEAIT 1614
            +LR+VD            F + E  L  +F+DR  L++A+T
Sbjct: 279  LLRNVDDPEGELTKLMDGFESFEQHLGYRFQDRSYLLQAMT 319



 Score = 42.7 bits (99), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+
Sbjct: 65   SVLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122

Query: 1667 NENFARVA 1674
            N N  R+ 
Sbjct: 123  NLNLYRLG 130


>gi|355695573|gb|AES00054.1| interferon induced with helicase C domain 1 [Mustela putorius furo]
          Length = 1020

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 14/130 (10%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLP------KVFAELPSLSFVKSASLIGHNNSQEM 764
           I+ +Y  TE+  R IIF +   +A  L       K FAE+     VK+  LIG  +S E 
Sbjct: 703 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENKKFAEVG----VKAHHLIGAGHSSEF 758

Query: 765 RTF---QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
           +     + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRA
Sbjct: 759 KPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRA 818

Query: 822 RKPGSDYILM 831
           R   S Y+L+
Sbjct: 819 RADESTYVLV 828



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 299 PELNLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKEHLDKKKKASEPGKVIVLV 358

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KVPLV Q   + R++    +  +   +G    D Q    +     T  V++ TAQIL N
Sbjct: 359 NKVPLVEQ---LFRKEFEPFLKKWYHTIGLS-GDTQLKISFPEVVKTYDVIISTAQILEN 414

Query: 416 ILRHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +S       ++    +L+++DECHH  K+  Y+ +M  +     K  +         
Sbjct: 415 SLSNSEKGEDDGVQFSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVI 474

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G   Q +    I  + + LD+  CTIK  KE
Sbjct: 475 PLPQILGLTASP-GVGGAKRQAEAKDHILKICANLDA--CTIKTVKE 518


>gi|440690962|pdb|4GL2|A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By
           Mda5
 gi|440690963|pdb|4GL2|B Chain B, Structural Basis For Dsrna Duplex Backbone Recognition By
           Mda5
          Length = 699

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 390 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 449

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 450 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 509

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 510 STYVLVAHSGS 520



 Score = 67.0 bits (162), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 28/224 (12%)

Query: 303 QARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKV 361
           Q RPYQ++V + A + KN I  L TG GKT +AV + +   +  ++ ++    + LV KV
Sbjct: 7   QLRPYQMEVAQPALEGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKV 66

Query: 362 PLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLNILR 418
            LV Q   + R++    +  +   +G    D Q    +     +  +++ TAQIL N L 
Sbjct: 67  LLVEQ---LFRKEFQPFLKKWYRVIGLS-GDTQLKISFPEVVKSCDIIISTAQILENSLL 122

Query: 419 H------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-----------P 461
           +      + +++   +L+I+DECHH  K+  Y+ +M  +     K  R           P
Sbjct: 123 NLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENKPVIPLP 182

Query: 462 SVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
            + G+TASP  + G + Q      I  L + LD+   TIK  KE
Sbjct: 183 QILGLTASP-GVGGATKQAKAEEHILKLCANLDAF--TIKTVKE 223


>gi|395844909|ref|XP_003795191.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Otolemur garnettii]
          Length = 1024

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 6/126 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    + V  K+  LIG  +S E +   
Sbjct: 707 IMEQYTSTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 766

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 767 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 826

Query: 826 SDYILM 831
           S Y+L+
Sbjct: 827 STYVLL 832



 Score = 72.4 bits (176), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ +     + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASVPGKVIVLV 363

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            KV LV Q    + E   ++   Y    +  D      +     +  V++ TAQIL N L
Sbjct: 364 NKVLLVEQL--FLEEFKPFLKKWYRVTGLSGDTQLKISFPEVVQSHDVIISTAQILENSL 421

Query: 418 RHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----------- 460
            ++       ++    +L+I+DECHH  K+  Y+ +M  +     K +R           
Sbjct: 422 LNTENEEDAGVQFSDFSLIIIDECHHTNKEAVYNNIMRRYVKQKLKNRRLVKENKPAVPL 481

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE----LEKHVPMPSEV 516
           P +  +TASP  + G + Q      I  L + LD+   TIK  KE    L+ H+  P + 
Sbjct: 482 PQILALTASP-GVGGATKQAKANEHILKLCANLDAF--TIKTVKENLDQLKDHIKEPCKK 538

Query: 517 VVEYD 521
           +   D
Sbjct: 539 IAIAD 543


>gi|301778989|ref|XP_002924913.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1-like [Ailuropoda melanoleuca]
 gi|281343300|gb|EFB18884.1| hypothetical protein PANDA_014321 [Ailuropoda melanoleuca]
          Length = 1019

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 14/130 (10%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLP------KVFAELPSLSFVKSASLIGHNNSQEM 764
           I+ +Y  TE+  R IIF +   +A  L       K FAE+     VK+  LIG  +S E 
Sbjct: 701 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENKKFAEVG----VKAHHLIGAGHSSEF 756

Query: 765 RTF---QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRA 821
           +     + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRA
Sbjct: 757 KPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRA 816

Query: 822 RKPGSDYILM 831
           R   S Y+L+
Sbjct: 817 RADESTYVLV 826



 Score = 77.8 bits (190), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 297 PELHLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 356

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KVPLV Q   + R++    +  +   +G    D Q    +     T  V++ TAQIL N
Sbjct: 357 NKVPLVEQ---LFRKEFEPFLKKWYHTIGLS-GDTQLKISFPEVVKTYDVIISTAQILEN 412

Query: 416 ILRHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +S       ++    +L+++DECHH  K+  Y+ +M  +     K  +         
Sbjct: 413 SLLNSEKGEDDGVQFSDFSLIVIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKECKPVI 472

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G   Q +    I  + + LD+  CTIK  KE
Sbjct: 473 PLPQILGLTASP-GVGGAKKQAEAKEHILKICANLDA--CTIKTVKE 516


>gi|402900290|ref|XP_003913111.1| PREDICTED: probable ATP-dependent RNA helicase DHX58 [Papio anubis]
          Length = 578

 Score = 93.2 bits (230), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++      G   PK++ L KIL + ++ ++  R IIF     +A  L     + P L  V
Sbjct: 330 VLAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTV 389

Query: 751 --KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             ++  LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCNVV+R+
Sbjct: 390 DIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRY 449

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
            L    ++ +Q+RGRAR   S Y  +   G+      L N   + ETL ++A+
Sbjct: 450 GLLTNEISMVQARGRARADQSVYSFVATEGSRELKRELIN--EALETLMEQAV 500



 Score = 68.9 bits (167), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 33/223 (14%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  +            K+ L      KV L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVA-----------KRHLETVDGAKVHL 52

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E  R      + V    G+MG    F    R         +L+ TA++L   L  
Sbjct: 53  VTQHGEEFRRMLDGRWTVTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTS 106

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP   
Sbjct: 107 PEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT- 165

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMP 513
            G +S++D AI  +  L + LD+  ++     R  L++H   P
Sbjct: 166 -GGASKLDGAIDHVLQLCANLDTWCIMSPQNYRPRLQEHSQQP 207


>gi|111226989|ref|XP_001134628.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
 gi|90971302|gb|EAS66962.1| hypothetical protein DDB_G0294407 [Dictyostelium discoideum AX4]
          Length = 837

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 17/222 (7%)

Query: 298 KMPEEQARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFL 357
           +M + + R YQ ++  ++ +K+ I  L TG GKTLI+ L+I+     +++ N     VF+
Sbjct: 226 EMNKSKPRDYQCELYRKSMEKDIICCLPTGLGKTLISCLVIKK----MKQLNPSKQIVFI 281

Query: 358 VPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
           V ++PLV QQ++VI  +TG  V       G+ F   Q  QR FD   VLV+   +   +L
Sbjct: 282 VDRIPLVIQQSDVIETETGLKV---LSAHGETFKPVQLKQR-FD---VLVVIGDLFNKLL 334

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASPVNLKG-- 475
            +  + + +  L+++DE HH VK+H ++ ++ +  +T  +   P + G+TASP   K   
Sbjct: 335 SNGDLNILSFCLIVIDEAHHIVKEHSFAKLLRDKLNTIPEICHPKILGLTASPAGKKDFF 394

Query: 476 ---VSSQVDCAIKICNLESKLDSVVCTIKDRKELEKHVPMPS 514
              +S ++   +  C +    +  +    ++K + K +P+P+
Sbjct: 395 NTLLSLKLISKVSRCEIIKPTNQSIIPYINQKNI-KIIPIPT 435



 Score = 79.3 bits (194), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 11/123 (8%)

Query: 713 LLKYQHTEDFRAIIFVE-RVVAALVLPKVFAELPSL------SFVKSASLIGHNNSQEMR 765
           +L  + ++D +AIIFV+ R VA     KV++ L  L      SF+K   ++GH +   M 
Sbjct: 573 ILDEKKSDDLKAIIFVKTRDVAK----KVYSLLDQLRMGDRFSFIKPNLVVGHGSIGGMS 628

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
               ++ I +FR  +  ++VATSV EEG D+ +CN+VIR D   TV A IQSRGR R   
Sbjct: 629 ISSQKKAIEEFRSDQCNVIVATSVVEEGFDVPECNIVIRLDPPTTVTANIQSRGRLRNRD 688

Query: 826 SDY 828
           S +
Sbjct: 689 SYF 691


>gi|403258897|ref|XP_003921978.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Saimiri boliviensis boliviensis]
          Length = 1025

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 6/126 (4%)

Query: 712 ILLKYQHTED-FRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           I+ +Y  TE+  R IIF +   +A  L +   E    +   VK+  LIG  +S E +   
Sbjct: 708 IMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMT 767

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CNVVIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNVVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILM 831
           S Y+L+
Sbjct: 828 STYVLV 833



 Score = 67.4 bits (163), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 34/240 (14%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 304 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLV 363

Query: 359 PKVPLV----YQQAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILL 414
            KV LV    +++ +   ++   V+G     +  D      +     +  +++ TAQIL 
Sbjct: 364 NKVLLVEQLFHKEFKPFLKKWYRVIG-----LSGDTQLKISFPEVVKSCDIIISTAQILE 418

Query: 415 NILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR-------- 460
           N L +      + +K+   +L+I+DECHH  K+  Y+ +M  +     K           
Sbjct: 419 NSLLNLENGEDAGVKLSDFSLIIIDECHHTNKEEVYNNIMRRYLKQKLKNNNLKKENKSV 478

Query: 461 ---PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE----LEKHVPMP 513
              P + G+TASP  + G   Q      I  L + LD+   TIK  +E    L+K +  P
Sbjct: 479 IPLPQILGLTASP-GVGGARKQAKAEEHILKLCASLDAF--TIKTVEENLDQLKKQIQEP 535


>gi|344268047|ref|XP_003405875.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 [Loxodonta africana]
          Length = 1025

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 6/126 (4%)

Query: 712 ILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQE---MR 765
           I+ +Y  TE   R IIF +   +A  L +   E    +   VK+  LIG  +S E   M 
Sbjct: 708 IMEQYTRTEGSARGIIFTKTRQSAFALSQWITENDKFAEVGVKAHHLIGAGHSSEFTHMT 767

Query: 766 TFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 768 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 827

Query: 826 SDYILM 831
           S YIL+
Sbjct: 828 STYILV 833



 Score = 78.2 bits (191), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 34/257 (13%)

Query: 286 NGKVGKKSEAKEKM------PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLI 338
           +G +G  S+ + +M      PE   R YQ++V + A + KN I  L TG+GKT +AV + 
Sbjct: 284 SGTMGSDSDEENEMRRASPEPELHLRSYQMEVAKPALEGKNIIICLPTGSGKTRVAVYIA 343

Query: 339 RSICNDLQRQNKKMLAVFLVPKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---R 395
           +   +  ++ ++    + LV KVPLV Q   + R++    +  +   MG    D Q    
Sbjct: 344 KDHLDKKKKSSEPGKVIVLVNKVPLVEQ---LFRKEFKPFLKKWYRTMGLS-GDTQLKIS 399

Query: 396 WQREFDTKQVLVMTAQILLNILRHSI------IKMEAINLLILDECHHAVKKHPYSLVMS 449
           +     +  V++ TAQIL N L +S       +++   +L+++DECHH  K+  Y+ +M 
Sbjct: 400 FPEVVKSCDVIISTAQILENSLLNSEKGEDAGVQLSDFSLIVIDECHHTNKEAVYNNIMR 459

Query: 450 EFYHTTSKEKR-----------PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLD-SVV 497
            +     K  R           P + G+TASP  + G   Q      I  + + LD S +
Sbjct: 460 RYLEQKLKNNRLKKQNKPVIPLPQILGLTASP-GVGGARKQAKADEHILKICANLDASTI 518

Query: 498 CTIKDR-KELEKHVPMP 513
            T+K+   EL +H+  P
Sbjct: 519 KTVKENVGELREHIKEP 535


>gi|347534362|ref|YP_004841032.1| ribonuclease 3 [Lactobacillus sanfranciscensis TMW 1.1304]
 gi|345504418|gb|AEN99100.1| Ribonuclease 3 [Lactobacillus sanfranciscensis TMW 1.1304]
          Length = 247

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 37/247 (14%)

Query: 1593 HALEDALKIKFKDRGLLVEAITHAS----RPSSGVSCYQRLEFVGDAVLDHLITKHLFFS 1648
            + L D   IKF +  LL EA T AS     P   +  Y+RLEF+GDAV   +++ ++F  
Sbjct: 18   NKLADKYNIKFNNEELLDEAFTQASYVNEHPDQDLKFYERLEFLGDAVYQLVVSDYIFKR 77

Query: 1649 YTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
            Y  +P GRLT LRAA VN  +F+R A +     ++R G                EE    
Sbjct: 78   YPEMPQGRLTRLRAAMVNRLSFSRFARECHFDKYIRLGKG--------------EE---- 119

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDT--SVVWQVFQPLLDPMVTPETLPMH 1766
                   G  K   +L DI ES  GA++LD G +T       V  P LD     E     
Sbjct: 120  -----KAGARKRDSLLCDIFESFIGAVYLDQGIETVKHFCNLVIFPKLDEGWFNEFFDHK 174

Query: 1767 PVRELQERCQQQAE-GLEYK-----ASRSGNLATVEVYIDGVQVGVAQNPQKKMAQKLAA 1820
               ELQE  Q      +EYK        +     V V++D  ++GV +   KK A++LA+
Sbjct: 175  T--ELQEAVQINGPVKIEYKLLDENGPDNDRQFKVAVFVDDQELGVGEGHSKKNAEQLAS 232

Query: 1821 RNALAVL 1827
            + AL  L
Sbjct: 233  KMALDKL 239



 Score = 58.2 bits (139), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 7/95 (7%)

Query: 1373 QLKDKINYPVPASKIL-EALTAASC------QETFCYERAELLGDAYLKWVVSRFLFLKY 1425
            +L DK N      ++L EA T AS       Q+   YER E LGDA  + VVS ++F +Y
Sbjct: 19   KLADKYNIKFNNEELLDEAFTQASYVNEHPDQDLKFYERLEFLGDAVYQLVVSDYIFKRY 78

Query: 1426 PQKHEGQLTRMRQQMVSNLVLYQYALSKGLQSYIQ 1460
            P+  +G+LTR+R  MV+ L   ++A       YI+
Sbjct: 79   PEMPQGRLTRLRAAMVNRLSFSRFARECHFDKYIR 113


>gi|312284067|ref|NP_001186061.1| probable ATP-dependent RNA helicase DHX58 [Sus scrofa]
 gi|229473596|gb|ACQ73327.1| LGP2 [Sus scrofa]
          Length = 681

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 15/172 (8%)

Query: 698 ADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV--KSAS 754
           ADG   PK++ L +IL K ++  +  R IIF     +A  L     + PSL  V  ++  
Sbjct: 343 ADGPENPKLEVLKEILQKQFKGPKSPRGIIFTRTRQSAHSLLLWLQQQPSLQTVDIRAQL 402

Query: 755 LIGH-NNSQEMRTFQM-----QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLA 808
           LIG  N+SQ     QM     QE I KFR G + LLVATSVAEEGLDI QCNVV+R+ L 
Sbjct: 403 LIGAGNSSQSTPMTQMTQRDQQEVIQKFRTGALNLLVATSVAEEGLDIPQCNVVVRYGLL 462

Query: 809 KTVLAYIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSE--ETLRKEAI 858
              ++ +Q+RGRAR   S Y  +  +G+      LR  + +E  E+L ++A+
Sbjct: 463 TNEISMVQARGRARASQSVYSFVAAQGSRE----LRREQTNEALESLMEQAV 510



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 44/304 (14%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + +N I +L TGAGKT  A  + +     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGRNIIIWLPTGAGKTRAAAYVAKRHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           V Q  E         + +    G+MG    F    R      +  +L+ TA++L   L  
Sbjct: 60  VTQHCEEFSRMLDRRWAITTLSGDMGPRAGFGHLAR------SHDLLICTAELLQKALTS 113

Query: 420 SI----IKMEAINLLILDECHHAVKKHPYSLVMSEFY-HTTSKEK-RPSVFGMTASPVNL 473
                 +++   +LL++DECHH  K   Y++++S++  H   + K  P V G+TASP   
Sbjct: 114 EEEEEHVELNVFSLLVVDECHHTHKDTVYNIILSQYLKHKFQRTKPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSEVVVEYD--------- 521
            G +S +D AI  I  L + LD+  ++     R +L++H   P +   +YD         
Sbjct: 173 -GRASTLDGAIDHILQLCANLDTWRIMSPQNSRSQLQEHSRQPCK---QYDLCHQRAQDP 228

Query: 522 ---KAASLW-SLHEQLKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERT 577
              K   L   +H  L+  E+  +   Q+  ++       A +AG +E  R+VY +  R 
Sbjct: 229 FGAKLKKLMDKIHRHLEMPELRRDFGTQTYEQQVVELSQAAAEAGLQE--RRVYALHLRR 286

Query: 578 ESDG 581
            +D 
Sbjct: 287 YNDA 290


>gi|153945886|ref|NP_766277.3| probable ATP-dependent RNA helicase DDX58 [Mus musculus]
 gi|341940435|sp|Q6Q899.2|DDX58_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName:
           Full=DEAD box protein 58; AltName: Full=RIG-I-like
           receptor 1; Short=RLR-1; AltName: Full=Retinoic
           acid-inducible gene 1 protein; Short=RIG-1; AltName:
           Full=Retinoic acid-inducible gene I protein; Short=RIG-I
 gi|148673498|gb|EDL05445.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Mus musculus]
 gi|189442795|gb|AAI67209.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [synthetic construct]
          Length = 926

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 22/227 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF  
Sbjct: 243 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N
Sbjct: 299 NQIPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVN 354

Query: 416 ILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPV 471
            L + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V
Sbjct: 355 NLNNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
            +    +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 414 GVGDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 460



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 610 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 669

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+R
Sbjct: 670 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 729

Query: 819 GRARKPGSDYILMIERGNL---SHATFLRNARNSEETLR 854
           GR R   S   L+    ++     A  ++    +E  LR
Sbjct: 730 GRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILR 768


>gi|157059804|gb|AAI52541.1| Ddx58 protein [Mus musculus]
          Length = 925

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 22/227 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF  
Sbjct: 242 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFA 297

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N
Sbjct: 298 NQIPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVN 353

Query: 416 ILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPV 471
            L + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V
Sbjct: 354 NLNNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-V 412

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
            +    +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 413 GVGDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 459



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 609 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 668

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+R
Sbjct: 669 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 728

Query: 819 GRARKPGSDYILMIERGNL---SHATFLRNARNSEETLR 854
           GR R   S   L+    ++     A  ++    +E  LR
Sbjct: 729 GRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILR 767


>gi|119850851|gb|AAI27164.1| Ddx58 protein [Mus musculus]
          Length = 924

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 114/227 (50%), Gaps = 22/227 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQRQ---NKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC    ++    +K   VF  
Sbjct: 241 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEHHLKKFPCGQKGKVVFFA 296

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQA V     E+ GY +    G       D+   Q   +   ++++T QIL+N
Sbjct: 297 NQIPVYEQQATVFSRYFERLGYNIASISGATS----DSVSVQHIIEDNDIIILTPQILVN 352

Query: 416 ILRH-SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR---PSVFGMTASPV 471
            L + +I  +    L+I DECH+  K HPY+ +M  +      E R   P V G+TAS V
Sbjct: 353 NLNNGAIPSLSVFTLMIFDECHNTSKNHPYNQIMFRYLDHKLGESRDPLPQVVGLTAS-V 411

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMPSEV 516
            +    +  +    IC L + LD SV+ T++D   ELE+ V  P ++
Sbjct: 412 GVGDAKTAEEAMQHICKLCAALDASVIATVRDNVAELEQVVYKPQKI 458



 Score = 70.5 bits (171), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 8/159 (5%)

Query: 704 PKVQSLIKILLKYQHTE-DFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH---N 759
           PK++ L  +L +  H + + + I+FV+       L K   E P+LSF+K   L G    N
Sbjct: 608 PKLRDLYLVLQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTN 667

Query: 760 NSQEMRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
            +  M     +  +  FR  G   +L+ATSVA+EG+DI +CN+VI ++    V+  IQ+R
Sbjct: 668 RATGMTLPAQKCVLEAFRASGDNNILIATSVADEGIDIAECNLVILYEYVGNVIKMIQTR 727

Query: 819 GRARKPGSDYILMIERGNL---SHATFLRNARNSEETLR 854
           GR R   S   L+    ++     A  ++    +E  LR
Sbjct: 728 GRGRARDSKCFLLTSSADVIEKEKANMIKEKIMNESILR 766


>gi|449507056|ref|XP_002194080.2| PREDICTED: interferon-induced helicase C domain-containing protein
           1-like [Taeniopygia guttata]
          Length = 1033

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 5/126 (3%)

Query: 712 ILLKYQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLIGHNNSQEMRTF-- 767
           ++ ++  TE+ R I+F +  ++A  L +   + P    V  K+  LIG  +  EM+    
Sbjct: 714 LMEEFTKTEEPRGIVFTKTRLSAFALFQWIKDNPKFEEVGIKAHYLIGSGHKSEMKPMTQ 773

Query: 768 -QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGS 826
            + +E I KFR G V LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   S
Sbjct: 774 NEQREVIDKFRCGNVNLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADES 833

Query: 827 DYILMI 832
            Y L++
Sbjct: 834 TYALVV 839



 Score = 66.6 bits (161), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 32/247 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           P+   R YQ++V + A   +N I  L TG+GKT +AV + +   +  +R ++    + LV
Sbjct: 323 PDLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLDKKKRASEPGKVIVLV 382

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY--CGEMGQDFWDAQ---RWQREFDTKQVLVMTAQIL 413
            KVPLV Q  +   E + ++   Y   G  G    D+Q    +        V++ TAQIL
Sbjct: 383 NKVPLVEQHLKT--EFSPFLKRWYQVIGLSG----DSQLKISFPEVVRRNDVIISTAQIL 436

Query: 414 LNILRHS------IIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR------- 460
            N L ++       + +   +L+I+DECHH  K+  Y+ +M  +     K ++       
Sbjct: 437 ENSLLNASKEDEESVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMKNRKLAKENKP 496

Query: 461 ----PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSV-VCTIKDR-KELEKHVPMPS 514
               P + G+TASP  + G +S       I  + + LD+  + T+++   +L+  V  PS
Sbjct: 497 LIPQPQILGLTASP-GVGGATSYSKAEEHILKICANLDACRIMTVEEHASQLKNQVKEPS 555

Query: 515 EVVVEYD 521
           +  V  D
Sbjct: 556 KKTVIAD 562


>gi|379055851|emb|CCD32429.1| dicer-1a, partial [Acyrthosiphon pisum]
 gi|379055853|emb|CCD32430.1| dicer-1a, partial [Acyrthosiphon pisum]
 gi|379055855|emb|CCD32431.1| dicer-1a, partial [Acyrthosiphon pisum]
 gi|379055857|emb|CCD32432.1| dicer-1a, partial [Acyrthosiphon pisum]
 gi|379055859|emb|CCD32433.1| dicer-1a, partial [Acyrthosiphon pisum]
          Length = 319

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 58/281 (20%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 55   DLNDHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 114

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 115  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTL 174

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T        + E+ + + K+G       + ++D+E+  L    +  + 
Sbjct: 175  WNMITLPTFKDPTDK------EIEEVIQQFKVG-------FSNEDIENTPLFVPYNLVTQ 221

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPES 1585
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     
Sbjct: 222  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SP 278

Query: 1586 VLRSVD------------FHALEDALKIKFKDRGLLVEAIT 1614
            +LR+VD            F + E  L   F+DR  L++A+T
Sbjct: 279  LLRNVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMT 319



 Score = 42.7 bits (99), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 1608 LLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVNN 1667
            +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+N
Sbjct: 66   VLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVSN 123

Query: 1668 ENFARVA 1674
             N  R+ 
Sbjct: 124  LNLYRLG 130


>gi|379055861|emb|CCD32434.1| dicer-1, partial [Aulacorthum solani]
 gi|379055863|emb|CCD32435.1| dicer-1, partial [Aulacorthum solani]
          Length = 319

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 129/281 (45%), Gaps = 58/281 (20%)

Query: 1376 DKINYPVPA-SKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLT 1434
            D  ++P P+ S +L+ALT ++  +    ER E +GD++LK+ ++ +L+  +   HEG+L+
Sbjct: 55   DLNDHPGPSPSVLLQALTMSNANDGINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLS 114

Query: 1435 RMRQQMVSNLVLYQYALSKGLQSYIQADRFAP-SRWAAPG-------------------- 1473
             +R + VSNL LY+    K     + + +F P   W  P                     
Sbjct: 115  HLRSKQVSNLNLYRLGKLKMFGERMISTKFEPHDNWLPPCYFVPHKLEKALINASIPTTL 174

Query: 1474 ----VLPVFDEDTKDGDSSLFDQEKSVAEDKLGTDKNYNEYEDDDMEDGEL--EGDSSSY 1527
                 LP F + T        + E+ + + K+G       + ++D+E+  L    +  + 
Sbjct: 175  WNMITLPTFKDPTDK------EIEEVIQQFKVG-------FSNEDIENTPLFVPYNLVTQ 221

Query: 1528 RVLSSKTLADVVEALIGVYYVEGGKDAANHLMKWIGIQV--ESDPEEVGCPSRPACVPES 1585
              +  K++AD VEALIG Y +  G   A   M W+GI+V    D  ++G    P+     
Sbjct: 222  HSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPPS---SP 278

Query: 1586 VLRSVD------------FHALEDALKIKFKDRGLLVEAIT 1614
            +LR+VD            F + E  L   F+DR  L++A+T
Sbjct: 279  LLRNVDDPEGELTKLMDGFESFEQHLGYHFQDRSYLLQAMT 319



 Score = 42.7 bits (99), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 1607 GLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITKHLFFSYTNLPPGRLTDLRAAAVN 1666
             +L++A+T  S  + G++  +RLE +GD+ L + IT +L+ ++ N+  G+L+ LR+  V+
Sbjct: 65   SVLLQALT-MSNANDGINL-ERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQVS 122

Query: 1667 NENFARVA 1674
            N N  R+ 
Sbjct: 123  NLNLYRLG 130


>gi|440903247|gb|ELR53934.1| Putative ATP-dependent RNA helicase DHX58 [Bos grunniens mutus]
          Length = 677

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 8/165 (4%)

Query: 700 GKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV--KSASLI 756
           G   PK++ L  IL K ++  +  R IIF     +A  L     + P L  V  +   L 
Sbjct: 345 GPENPKLEVLEAILQKQFRSPDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQVLT 404

Query: 757 GH-NNSQEMRTFQM--QETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLA 813
           G  NNSQ+ +  QM  QE I KFR G + LLVATSVAEEGLDI QCNVV+R+ L    ++
Sbjct: 405 GAGNNSQKTQMIQMTQQEVIQKFRTGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEIS 464

Query: 814 YIQSRGRARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
            +Q+RGRAR   S Y  +  +G+      L N   + ETL K A+
Sbjct: 465 MVQARGRARASQSVYSFVAAQGSRELQRELTN--EALETLMKRAV 507



 Score = 68.2 bits (165), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 25/229 (10%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TG+GKT  A  + R     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYVARRHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIRE--QTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL---- 417
           V Q  E      +  + +    G+MG         +R      +L+ TA++L   L    
Sbjct: 60  VTQHCEEFSRMLERRWTITTLSGDMGPRAGFGHVARRH----DLLICTAELLQKALASPE 115

Query: 418 RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNLKG 475
               +++ A +LL++DECHH  K   Y++++S++     +  R  P V G+TASP    G
Sbjct: 116 EEEHVELNAFSLLVVDECHHTHKDTVYNIILSQYLELKLQRTRPLPQVLGLTASPGT--G 173

Query: 476 VSSQVDCAI-KICNLESKLDSV-VCTIKDRK-ELEKHVPMPSEVVVEYD 521
            +S ++ AI  +  L + LD+  + + KD   +L++H   P +   +YD
Sbjct: 174 GASTLEGAIDHVLQLCANLDTWRIMSPKDHSPKLQEHSHQPCK---QYD 219


>gi|297273051|ref|XP_002800519.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 2
           [Macaca mulatta]
          Length = 661

 Score = 92.8 bits (229), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++      G   PK++ L KIL + ++ ++  R IIF     +A  L     + P L  V
Sbjct: 320 VLAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTV 379

Query: 751 --KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             ++  LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCNVV+R+
Sbjct: 380 DIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRY 439

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
            L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 440 GLLTNEISMVQARGRARADQSVYSFVATEGS 470



 Score = 57.4 bits (137), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 41/224 (18%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQ-RQNKKMLAVFLVPKVP 362
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     +   + ++ML         
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAKFRRML--------- 54

Query: 363 LVYQQAEVIREQTGYVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL--- 417
                         + V    G+MG    F    R         +L+ TA++L   L   
Sbjct: 55  -----------DGRWTVTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTSP 97

Query: 418 -RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNLK 474
                +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP    
Sbjct: 98  EEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT-- 155

Query: 475 GVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSE 515
           G +S++D AI  +  L + LD+  ++     R  L++H   P +
Sbjct: 156 GGASKLDGAIDHVLQLCANLDTWCIMSPQNYRPRLQEHSQQPCK 199


>gi|395855810|ref|XP_003800342.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 2
           [Otolemur garnettii]
          Length = 931

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 22/224 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC D  +   Q ++   VF  
Sbjct: 243 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEDHLKKFSQGQRRKVVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQ  V     E+ GY V    G   ++       ++  +   ++ +T QIL+N
Sbjct: 299 NQIPVYEQQKSVFSKYFERLGYKVAGISGATAEN----APVEQIVENNDIIFLTPQILVN 354

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  I  +    L+I DECH+  K+HPY+++M  +       S +  P V GMTAS V
Sbjct: 355 NLKNGTIPSLSVFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSDPLPQVIGMTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMP 513
            +    +  +    IC L + LD S + T+KD  +ELE+ V  P
Sbjct: 414 GVGDAKNTDEAMDYICRLCASLDVSEIVTVKDNLEELEQIVYKP 457



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH--NN 760
           PK++ L  IL + Y    + R I+FV+       L K       L+F+K   L G    N
Sbjct: 615 PKLEDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEGNSRLNFLKPDILTGRCKTN 674

Query: 761 SQEMRTFQMQETIAKF--RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                T   Q+ +      +G   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+R
Sbjct: 675 QNIGMTLPAQKCVLNTFGTNGANNILIATSVADEGIDIVQCNLVILYEYVGNVIKMIQTR 734

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R  GS   L+    ++
Sbjct: 735 GRGRARGSKCFLLTSNADV 753


>gi|291236967|ref|XP_002738409.1| PREDICTED: Dicer Related Helicase family member (drh-1)-like
           [Saccoglossus kowalevskii]
          Length = 877

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 6/159 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIG---HN 759
           PK++ L   L K Y   E  R IIF +   +   L       P L+F+K   L G   ++
Sbjct: 544 PKLKRLQSQLEKEYSTKEGSRGIIFTKTRESTKALVSWIKNTPDLNFLKVDRLTGTGPNS 603

Query: 760 NSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRG 819
            S+ M     Q+ I KF  G +  LVAT+VAEEGLDI +CNVVIR++L    +A +Q+RG
Sbjct: 604 TSKSMTQKDQQDIILKFHKGDLNCLVATTVAEEGLDIPECNVVIRYNLVTNEIAMVQARG 663

Query: 820 RARKPGSDYILMIERGNLSHATFLRNARNSEETLRKEAI 858
           RAR   S Y L+   G  S A         +E+L K+AI
Sbjct: 664 RARAKDSTYTLVA--GENSGAAVREQTNEYKESLEKKAI 700



 Score = 81.6 bits (200), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 25/234 (10%)

Query: 300 PEE----QARPYQLDVLEQAK-KKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLA 354
           PEE    + RPYQ ++++ +    N I    TG+GKT IA  +  ++ +  QR+N K+L 
Sbjct: 179 PEEDIVIELRPYQAELVKPSIFGHNVIVSAPTGSGKTRIAAFI--TLNHLKQRENAKVL- 235

Query: 355 VFLVPKVPLVYQ--QAEVIREQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQI 412
             LV KVPLV Q  + E     + Y V   CGE           +   +   V+++TAQI
Sbjct: 236 -LLVNKVPLVEQHYKKEFKLLTSKYKVSKICGESAARV----SLKHLVEKNDVVILTAQI 290

Query: 413 LLNILRH----SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEK---RPSVFG 465
           L N L +      +++   +LLI DECHH  K   Y+ +M E+     +EK    P + G
Sbjct: 291 LENALNNGEDNEKLELTDFSLLIFDECHHTQKGEVYNNIMHEYLKLKIEEKVYQLPQILG 350

Query: 466 MTASPVNLKGVSSQVDCAIKICNLESKLDSV-VCTIK-DRKELEKHVPMPSEVV 517
           +TAS + + G  ++      I  + + LD + + T++ + K LE+H   P +VV
Sbjct: 351 LTAS-LGVGGARTEYKAVTHILQICANLDCMDLRTVQAETKGLEEHNKKPHKVV 403


>gi|363992266|gb|AEW46678.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Pteropus alecto]
          Length = 929

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 22/224 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   AK  KNTI    TG GKT +++L    IC + LQ+  Q +K   VF  
Sbjct: 241 KPRGYQLELALPAKNGKNTIICAPTGCGKTFVSLL----ICEHHLQKFPQGQKGKVVFFA 296

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            +VP+  QQ  V     E+ GY V    G   ++    Q      +   ++++T QIL+N
Sbjct: 297 VQVPVYEQQKSVFSKYFERRGYKVSGISGATAENVSVEQI----IEDNDIIILTPQILVN 352

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  +  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V
Sbjct: 353 SLKNGTVPSLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDSLPQVVGLTAS-V 411

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMP 513
            +    S  +    IC L + LD SVV T+KD  +ELE+ V  P
Sbjct: 412 GVGDAKSTGEALEYICKLCASLDISVVATVKDNLEELEEVVYKP 455



 Score = 72.4 bits (176), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ 762
           PK++ L  +L + Y    + R I+FV+       L K   E P LSF+K     G   ++
Sbjct: 613 PKLKDLCFVLQEEYHLNPETRTILFVKTRALVDALKKWIEENPKLSFLKPGISTGRGRTK 672

Query: 763 E---MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
           +   M     ++ +  F+  G   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+R
Sbjct: 673 QNIGMTLPAQKDVLHTFKTSGDNKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTR 732

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R  GS   L+    ++
Sbjct: 733 GRGRARGSKCFLLTSNSDV 751


>gi|154147577|ref|NP_001093664.1| interferon-induced helicase C domain-containing protein 1 [Sus
           scrofa]
 gi|152148442|gb|ABS29718.1| melanoma differentiation associated protein-5 [Sus scrofa]
          Length = 1023

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 13/126 (10%)

Query: 720 EDFRAIIFVERVVAALVLP------KVFAELPSLSFVKSASLIGHNNSQEMRTF---QMQ 770
           E  R IIF +   +A  L       K FAE+     VK+  LIG  +S E +     + +
Sbjct: 714 ESARGIIFTKTRQSAYALSQWITDNKKFAEVG----VKAHHLIGAGHSSEFKPMTQNEQR 769

Query: 771 ETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYIL 830
           E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   S Y+L
Sbjct: 770 EVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVL 829

Query: 831 MIERGN 836
           + + G+
Sbjct: 830 VAQSGS 835



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 24/225 (10%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE   RPYQL+V + A + KN I  L TG+GKT +AV + +   +  +  ++    + LV
Sbjct: 303 PELHLRPYQLEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKEASEPGKVIVLV 362

Query: 359 PKVPLVYQQAEVIREQTGYVVGHY-CGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNIL 417
            KVPLV Q     +E   ++   Y    +  D      +     +  V++ TAQIL N L
Sbjct: 363 NKVPLVEQLFR--KEFEPFLKKWYRVTRLSGDTQLKITFPEVVKSCDVIISTAQILENSL 420

Query: 418 RHSI------IKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR----------- 460
            +S       +++   +L+I+DECHH  K+  Y+ +M  +     K  +           
Sbjct: 421 LNSEEGEDPGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKEEKPVIPL 480

Query: 461 PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
           P + G+TASP  + G   Q      I  + + LD+   TIK  K+
Sbjct: 481 PQILGLTASP-GVGGAKKQAKAEEHILKICANLDAF--TIKTVKK 522


>gi|383412907|gb|AFH29667.1| putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
          Length = 678

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++      G   PK++ L KIL + ++ ++  R IIF     +A  L     + P L  V
Sbjct: 337 VLAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTV 396

Query: 751 --KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             ++  LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 DIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
            L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 457 GLLTNEISMVQARGRARADQSVYSFVATEGS 487



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 26/225 (11%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E  R      + V    G+MG    F    R         +L+ TA++L   L  
Sbjct: 60  VTQHGEEFRRMLDGRWTVTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP   
Sbjct: 114 PEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSE 515
            G +S++D AI     L + LD+  ++     R  L++H   P +
Sbjct: 173 -GGASKLDGAIDHALQLCANLDTWCIMSPQNYRPRLQEHSQQPCK 216


>gi|354493094|ref|XP_003508679.1| PREDICTED: interferon-induced helicase C domain-containing protein
           1 isoform 1 [Cricetulus griseus]
 gi|344245797|gb|EGW01901.1| Interferon-induced helicase C domain-containing protein 1
           [Cricetulus griseus]
          Length = 1022

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 6/131 (4%)

Query: 712 ILLKYQHTEDF-RAIIFVERVVAALVLPKVFAELPSLS--FVKSASLIGHNNSQEMRTF- 767
           IL ++  TE+  R IIF +   +   L +   E    +   VK+  LIG  +S E++   
Sbjct: 705 ILEQFTKTEESSRGIIFTKTRQSTYALSQWITENEKFAEVGVKAHHLIGAGHSSEVKPMT 764

Query: 768 --QMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPG 825
             + +E I+KFR G++ LL+AT+VAEEGLDI++CN+VIR+ L    +A +Q+RGRAR   
Sbjct: 765 QNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADE 824

Query: 826 SDYILMIERGN 836
           S Y+L+   G+
Sbjct: 825 STYVLVTSSGS 835



 Score = 69.3 bits (168), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 28/227 (12%)

Query: 300 PEEQARPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLV 358
           PE Q RPYQ++V + A + KN I  L TG+GKT +AV + +   +  ++ ++    + LV
Sbjct: 302 PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASEPGKVMVLV 361

Query: 359 PKVPLVYQQAEVIREQTGYVVGHYCGEMGQDFWDAQ---RWQREFDTKQVLVMTAQILLN 415
            KV L  Q   + R++    +  +   +G    D Q    +     +  V++ TAQIL N
Sbjct: 362 NKVMLAEQ---LFRKEFNPFLKKWYRIIGLS-GDTQLKISFPEVVKSYDVIISTAQILEN 417

Query: 416 ILRH------SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--------- 460
            L +        +++   +L+I+DECHH  K+  Y+ +M  +     K  +         
Sbjct: 418 SLLNLESGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKQNKPVV 477

Query: 461 --PSVFGMTASPVNLKGVSSQVDCAIKICNLESKLDSVVCTIKDRKE 505
             P + G+TASP  + G   Q +    I N+ + LD+   TIK  KE
Sbjct: 478 HLPQILGLTASP-GVGGAKKQAEAEKHILNICANLDAF--TIKTVKE 521


>gi|109115463|ref|XP_001108799.1| PREDICTED: probable ATP-dependent RNA helicase DHX58-like isoform 1
           [Macaca mulatta]
 gi|355568695|gb|EHH24976.1| Putative ATP-dependent RNA helicase DHX58 [Macaca mulatta]
          Length = 678

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++      G   PK++ L KIL + ++ ++  R IIF     +A  L     + P L  V
Sbjct: 337 VLAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTV 396

Query: 751 --KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             ++  LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 DIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
            L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 457 GLLTNEISMVQARGRARADQSVYSFVATEGS 487



 Score = 70.9 bits (172), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 26/225 (11%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E  R      + V    G+MG    F    R         +L+ TA++L   L  
Sbjct: 60  VTQHGEEFRRMLDGRWTVTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP   
Sbjct: 114 PEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSE 515
            G +S++D AI  +  L + LD+  ++     R  L++H   P +
Sbjct: 173 -GGASKLDGAIDHVLQLCANLDTWCIMSPQNYRPRLQEHSQQPCK 216


>gi|395855808|ref|XP_003800341.1| PREDICTED: probable ATP-dependent RNA helicase DDX58 isoform 1
           [Otolemur garnettii]
          Length = 926

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 22/224 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSICNDLQR---QNKKMLAVFLV 358
           + R YQL++   AKK KNTI    TG GKT +++L    IC D  +   Q ++   VF  
Sbjct: 243 KPRNYQLELALPAKKGKNTIICAPTGCGKTFVSLL----ICEDHLKKFSQGQRRKVVFFA 298

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            ++P+  QQ  V     E+ GY V    G   ++       ++  +   ++ +T QIL+N
Sbjct: 299 NQIPVYEQQKSVFSKYFERLGYKVAGISGATAEN----APVEQIVENNDIIFLTPQILVN 354

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  I  +    L+I DECH+  K+HPY+++M  +       S +  P V GMTAS V
Sbjct: 355 NLKNGTIPSLSVFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSDPLPQVIGMTAS-V 413

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMP 513
            +    +  +    IC L + LD S + T+KD  +ELE+ V  P
Sbjct: 414 GVGDAKNTDEAMDYICRLCASLDVSEIVTVKDNLEELEQIVYKP 457



 Score = 65.5 bits (158), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGH--NN 760
           PK++ L  IL + Y    + R I+FV+       L K       L+F+K   L G    N
Sbjct: 610 PKLEDLCFILQEEYHLNPETRTILFVKTRALVDALKKWIEGNSRLNFLKPDILTGRCKTN 669

Query: 761 SQEMRTFQMQETIAKF--RDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
                T   Q+ +      +G   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+R
Sbjct: 670 QNIGMTLPAQKCVLNTFGTNGANNILIATSVADEGIDIVQCNLVILYEYVGNVIKMIQTR 729

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R  GS   L+    ++
Sbjct: 730 GRGRARGSKCFLLTSNADV 748


>gi|355754175|gb|EHH58140.1| Putative ATP-dependent RNA helicase DHX58 [Macaca fascicularis]
          Length = 678

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 6/151 (3%)

Query: 692 IIGAAVADGKVTPKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFV 750
           ++      G   PK++ L KIL + ++ ++  R IIF     +A  L     + P L  V
Sbjct: 337 VLAHLATHGPENPKLEMLEKILQRQFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTV 396

Query: 751 --KSASLIGHNNSQE---MRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRF 805
             ++  LIG  NS +   M     QE I KFRDG + LLVATSVAEEGLDI QCNVV+R+
Sbjct: 397 DIRAQLLIGAGNSSQSTHMTQRDQQEVIRKFRDGTLNLLVATSVAEEGLDIPQCNVVVRY 456

Query: 806 DLAKTVLAYIQSRGRARKPGSDYILMIERGN 836
            L    ++ +Q+RGRAR   S Y  +   G+
Sbjct: 457 GLLTNEISMVQARGRARADQSVYSFVATEGS 487



 Score = 69.7 bits (169), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 26/225 (11%)

Query: 305 RPYQLDVLEQA-KKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVPL 363
           RPYQ +V+  A + KN I +L TGAGKT  A  + +     +         V LV +V L
Sbjct: 4   RPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAK----VVVLVNRVHL 59

Query: 364 VYQQAEVIREQTG--YVVGHYCGEMG--QDFWDAQRWQREFDTKQVLVMTAQILLNIL-- 417
           V Q  E  R      + +    G+MG    F    R         +L+ TA++L   L  
Sbjct: 60  VTQHGEEFRRMLDGRWTMTTLSGDMGPRAGFGHLAR------CHDLLICTAELLQMALTS 113

Query: 418 --RHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKR--PSVFGMTASPVNL 473
                 +++ A +L+++DECHH  K   Y+++MS +     +  R  P V G+TASP   
Sbjct: 114 PEEEEHVELTAFSLIVVDECHHTHKDTVYNVIMSRYLELKLQRARPLPQVLGLTASPGT- 172

Query: 474 KGVSSQVDCAI-KICNLESKLDS--VVCTIKDRKELEKHVPMPSE 515
            G +S++D AI  +  L + LD+  ++     R  L++H   P +
Sbjct: 173 -GGASKLDGAIDHVLQLCANLDTWCIMSPQNYRPRLQEHSQQPCK 216


>gi|431902875|gb|ELK09090.1| Putative ATP-dependent RNA helicase DDX58 [Pteropus alecto]
          Length = 929

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 22/224 (9%)

Query: 303 QARPYQLDVLEQAKK-KNTIAFLETGAGKTLIAVLLIRSIC-NDLQR--QNKKMLAVFLV 358
           + R YQL++   AK  KNTI    TG GKT +++L    IC + LQ+  Q +K   VF  
Sbjct: 241 KPRGYQLELALPAKNGKNTIICAPTGCGKTFVSLL----ICEHHLQKFPQGQKGKVVFFA 296

Query: 359 PKVPLVYQQAEVIR---EQTGYVVGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLN 415
            +VP+  QQ  V     E+ GY V    G   ++    Q      +   ++++T QIL+N
Sbjct: 297 VQVPVYEQQKSVFSKYFERRGYKVSGISGATAENVSVEQI----IEDNDIIILTPQILVN 352

Query: 416 ILRHSII-KMEAINLLILDECHHAVKKHPYSLVMSEFYHTT---SKEKRPSVFGMTASPV 471
            L++  +  +    L+I DECH+  K HPY+++M  +       S +  P V G+TAS V
Sbjct: 353 SLKNGTVPSLSVFTLMIFDECHNTSKHHPYNMIMFNYLDQKLGGSSDSLPQVVGLTAS-V 411

Query: 472 NLKGVSSQVDCAIKICNLESKLD-SVVCTIKDR-KELEKHVPMP 513
            +    S  +    IC L + LD SVV T+KD  +ELE+ V  P
Sbjct: 412 GVGDAKSTGEALEYICKLCASLDISVVATVKDNLEELEEVVYKP 455



 Score = 75.1 bits (183), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 5/139 (3%)

Query: 704 PKVQSLIKILLK-YQHTEDFRAIIFVERVVAALVLPKVFAELPSLSFVKSASLIGHNNSQ 762
           PK++ L  +L + Y    + R I+FV+       L K   E P LSF+K   L G   ++
Sbjct: 613 PKLKDLCFVLQEEYHLNPETRTILFVKTRALVDALKKWIEENPKLSFLKPGILTGRGRTK 672

Query: 763 E---MRTFQMQETIAKFR-DGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSR 818
           +   M     ++ +  F+  G   +L+ATSVA+EG+DI QCN+VI ++    V+  IQ+R
Sbjct: 673 QNIGMTLPAQKDVLHTFKTSGDNKILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTR 732

Query: 819 GRARKPGSDYILMIERGNL 837
           GR R  GS   L+    ++
Sbjct: 733 GRGRARGSKCFLLTSNSDV 751


>gi|16082461|ref|NP_394951.1| RNA helicase (RIG-I) [Thermoplasma acidophilum DSM 1728]
 gi|10640841|emb|CAC12619.1| RNA helicase (RIG-I) related protein [Thermoplasma acidophilum]
          Length = 508

 Score = 92.4 bits (228), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 18/171 (10%)

Query: 303 QARPYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKMLAVFLVPKVP 362
           Q R YQL+V + +  +NT+  + TG GKT+IA + I     + +R      ++ + P  P
Sbjct: 4   QPREYQLNVFKNSIGQNTLIVMPTGLGKTIIAAMFIEKFYGEKKR------SLMVAPTKP 57

Query: 363 LVYQQAEVIREQTGYV---VGHYCGEMGQDFWDAQRWQREFDTKQVLVMTAQILLNILRH 419
           LV Q A  I + TG     +G + GE+     DA+  +  + TK++ V T Q++ N +R 
Sbjct: 58  LVLQHARTIADSTGISENEIGVFTGEI-----DAEERELIWVTKKIFVSTPQVVFNDMRS 112

Query: 420 SIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTSKEKRPSVFGMTASP 470
            I+ +   +L+I DE H AV  + Y  +  E+     K K+  + G+TASP
Sbjct: 113 GILDITKFDLIIFDEAHRAVGNYAYVDIAQEYL----KYKKKLIIGLTASP 159



 Score = 59.7 bits (143), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)

Query: 698 ADGKVTPKVQSLIKILLKYQHTEDFRAIIFVE-RVVAALVLPKVFAELPSLSFVKSASLI 756
           ADG   PK++  + I+    H  + RAI+F   R+ + L++  +     SL  V+     
Sbjct: 324 ADGYTNPKMEKTLSIMESNVHG-NARAIVFTHYRITSDLLMDYIQKNGTSLKPVRFIGQA 382

Query: 757 GHNNSQEMRTFQMQETIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQ 816
              + + +   Q ++ I  F++    +L+ATS+AEEGLDI   + VI ++   + + YIQ
Sbjct: 383 DRGSDEGLSQDQQKKIIEDFKNNVYNVLIATSIAEEGLDIPDTDFVIFYEAVPSEIRYIQ 442

Query: 817 SRGRA--RKPGSDYILMIE 833
            +GR    + G  YIL+ E
Sbjct: 443 RKGRTGRSRNGQVYILVFE 461


>gi|424780882|ref|ZP_18207749.1| Ribonuclease III [Catellicoccus marimammalium M35/04/3]
 gi|422842583|gb|EKU27034.1| Ribonuclease III [Catellicoccus marimammalium M35/04/3]
          Length = 231

 Score = 92.4 bits (228), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 55/257 (21%)

Query: 1595 LEDALKIKFKDRGLLVEAITHASRPSS----GVSCYQRLEFVGDAVLDHLITKHLFFSYT 1650
            L+D  +I+FK+  LL EA TH+S  +      + C +RLE++GDAVL+ L++ +LF  Y 
Sbjct: 8    LQDQYQIQFKNERLLKEAFTHSSYANEHREEQLPCNERLEYLGDAVLELLVSTYLFKEYP 67

Query: 1651 NLPPGRLTDLRAAAVNNENFARVA--VKHKLHVHLRHGSSALDRQIRDFVKEVLEELLKP 1708
             LP G+LT  RAA V  ++ A  A  V    H+ L  G    + + R             
Sbjct: 68   ELPEGKLTRFRAAIVKEDSLAYFAKEVHFDEHIFLGKGEEKANGRQR------------- 114

Query: 1709 GFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTSVVWQVFQPLLDPMVTPE------T 1762
                        P +L D+ E+  GA++LD G +        Q  LD ++ P+      T
Sbjct: 115  ------------PALLCDLFEAFLGALYLDQGLEK------VQAFLDQVMFPKVKSGTFT 156

Query: 1763 LPMHPVRELQERCQQQAE-GLEYKA--------SRSGNLATVEVYIDGVQVGVAQNPQKK 1813
              +    +LQE  Q+Q E  ++Y+         +RS  +A   VY DG  + V     KK
Sbjct: 157  SAVDYKTKLQELLQKQGEVKIQYQLVAEEGPAHNRSFKMA---VYCDGNLLSVGTGRSKK 213

Query: 1814 MAQKLAARNALAVLKEK 1830
             A+++AA+ A+   +E+
Sbjct: 214  QAEQIAAQKAIQEWQER 230



 Score = 46.6 bits (109), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 32/50 (64%)

Query: 1401 CYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNLVLYQYA 1450
            C ER E LGDA L+ +VS +LF +YP+  EG+LTR R  +V    L  +A
Sbjct: 42   CNERLEYLGDAVLELLVSTYLFKEYPELPEGKLTRFRAAIVKEDSLAYFA 91


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.134    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,653,306,064
Number of Sequences: 23463169
Number of extensions: 1356988517
Number of successful extensions: 3660462
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13734
Number of HSP's successfully gapped in prelim test: 6301
Number of HSP's that attempted gapping in prelim test: 3592703
Number of HSP's gapped (non-prelim): 55657
length of query: 1931
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1773
effective length of database: 8,652,014,665
effective search space: 15340022001045
effective search space used: 15340022001045
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 85 (37.4 bits)