Your job contains 1 sequence.
>000177
MEGSSSQGLSEAPVLEGGGGEGGGGGGGGEDETKKVEEELMAKAQKLMEKITSSPDNPNP
SVLHALSSLFEIQESLYLEESGFSSNNARASHNIGRLGNLVRENDDFFELISSKFLSESR
YSTSVQAAAARLVLSCSLTWIYPHAFEEPVVDNVKNWVMDETARLSCEDRHLKHHMSRKE
ASDSEMLKTYATGLLAVCLAGGGQVVEDVLTSGLSAKLMRYLRIRVLGETSQKDANHLAE
SKNSASATSLRGREEGRVRLRQILEHPDERTIDERSLDDQDIERVTHGDECGADDGEPHD
GLAAGIDMSEAYTDAREGKTKLGDNDETGRDDSSRRRMNRGWIRSRGKGRINEGAIETDQ
GLTSPVSGSRLGQVRSIRDRSVSKSSDTKKAPDGRKHSGTIGSDGVFMEREDGDDCFQEC
RVGSKDISDMVKKAVRAAEAEARAANAPLEAIKAAGDAAAEVVKSAASEEFKTTNDEDAA
LLAASRAASTVIDAADAVEVSRNSISNNVDSVSVSVTETETNEDVEEYFIPDVESLAQLR
EKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAMLLPDVMKLICAL
AAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMERVCALPTDVVHQL
VELAIQLLECTQDQARKNAALFFAAAFVFRAIIDAFDAQDGLQKLLGLLNDAASVRSGVN
AGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRS
AGRNIPNVRAAYKPLDISNEAIDAVFLQLQKDRKLGPALVRTRWPAVDRFLSLNGHITLL
ELCQAPPVERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNNHTGIAVILDAANAVSS
YVDPEIIQPALNVLINLVCPPPSISNKPPLLAQGQQSVSGQTSNGPSMEPRDRNAERNVS
DRVVYMPSQSDLRERNVDSSLLDRGSSANTQLACSTSQTPVPTPTSGLVGDRRISLGAGA
GCAGLAAQLEQGYRQAREAVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLAR
DDTIAHILTKLQVGKKLSELIRDSGGQTPATEQGRWQAELSQVAIELIAIVTNSGRASTL
AATDAATPTLRRIERAAIAAATPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQLTPL
PSLAAPSSLAHQISTQESPSIQIQWPSGRSPGFLTGKSKLAARDEDISLKCDSSMSSKKK
QLVFSPSFNLQSRHQSQSHDSQTPSSRKVFSNSKQSAVPSVLEIPHESVSKSNPDTDSQS
KTPIALPMKRKLSELKDTGLSLSGKRLHTGDLGLRSPSCPTPNSVRKSSLLNDPQGFSTP
GSLAEYLDDNQCGNYHAGQATPSFQLGALNDPQPSNSERITLDSLVVQYLKHQHRQCPAP
ITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKSTYSGVHRNRRDRQFVYSRFRP
WRTCRDDAGALLTCITFLGDSSHIAVGSHTKELKIFDSNSSSPLESCTSHQAPVTLVQSH
LSGETQLLLSSSSQDVHLWNASSIAGGPMHSFEGCKAARFSNSGNLFAALPTETSDRGIL
LYDIQTYQLEAKLSDTSVNLTGRGHAYSQIHFSPSDTMLLWNGILWDRRNSVPVHRFDQF
TDHGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTTITFNARGDVIYAILRRNLED
VMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFATERTDSFVGLITMDDQED
MFSSARIYEIGRRRPTEDDSDPDDAESDEEDEEDDDDVDVDPLLGADLDGDGDSEGDDLS
NSDEDDSVSDLDDEDDGDFMMDDVDYDGGGGLLEIVTEGDEDEDSQLVESLSSGDEEDFI
GF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000177
(1922 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126296 - symbol:DCAF1 "AT4G31160" species:370... 1595 0. 5
UNIPROTKB|Q9Y4B6 - symbol:VPRBP "Protein VPRBP" species:9... 532 2.5e-78 5
MGI|MGI:2445220 - symbol:Vprbp "Vpr (HIV-1) binding prote... 531 6.7e-78 5
RGD|1305176 - symbol:Vprbp "Vpr (HIV-1) binding protein" ... 512 8.7e-76 5
FB|FBgn0034641 - symbol:mahj "mahjong" species:7227 "Dros... 365 7.5e-60 5
WB|WBGene00014243 - symbol:dcaf-1 species:6239 "Caenorhab... 378 2.2e-44 5
TAIR|locus:2051094 - symbol:MAC3B "MOS4-associated compl... 125 0.00064 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 121 0.00077 1
>TAIR|locus:2126296 [details] [associations]
symbol:DCAF1 "AT4G31160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA;IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0048367 "shoot
system development" evidence=IMP] [GO:0048827 "phyllome
development" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 UniPathway:UPA00143 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0009793 GO:GO:0016567
InterPro:IPR013720 Pfam:PF08513 GO:GO:0009908 GO:GO:0048366
EMBL:AL161578 GO:GO:0080008 EMBL:AL049914 EMBL:AK118434
IPI:IPI00539541 PIR:T10670 RefSeq:NP_194845.4 UniGene:At.19830
ProteinModelPortal:Q9M086 SMR:Q9M086 IntAct:Q9M086 STRING:Q9M086
PaxDb:Q9M086 PRIDE:Q9M086 EnsemblPlants:AT4G31160.1 GeneID:829244
KEGG:ath:AT4G31160 GeneFarm:4077 TAIR:At4g31160 eggNOG:NOG237621
HOGENOM:HOG000241142 InParanoid:Q9M086 KO:K11789 OMA:FNMTISG
PhylomeDB:Q9M086 ProtClustDB:CLSN2695281 Genevestigator:Q9M086
Uniprot:Q9M086
Length = 1883
Score = 1595 (566.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 341/625 (54%), Positives = 417/625 (66%)
Query: 329 GRDDSSRRRMNRGWI-RSRGKGRINEGAIETDQGLTSPVSGS-RLGQVRSIRDRSVSKSS 386
G D+S R +R + RS+ +GR G + T + S RLG++ +RDR +SK S
Sbjct: 311 GDDNSVRDDPSRHRLNRSKSRGR---GRVHEGAPDTEVLLASPRLGRLL-VRDRDLSKIS 366
Query: 387 DTKKAPDGRKHSGTIGSDGVFMEREDGDDCFQECRVGSKDISDMXXXXXXXXXXXXXXXN 446
D + A D G + S + +ERED D+CFQ C +G+K+I+D+ +
Sbjct: 367 DGRNAEDVTVCLGKMKSGIMEIEREDNDECFQGCIIGTKNITDLVKRAVGAAETEARAAH 426
Query: 447 APLXXXXXXXXXXXXXXXXXXXXXFKTTNDEDXXXXXXXXXXXTVIDAADAVEVSRXXXX 506
AP FK++ E+ TVIDAA EVSR
Sbjct: 427 APDDAAKAAGDAAAELVKTAALEEFKSSGSEEAAVSAATRAAITVIDAA---EVSRNPTC 483
Query: 507 XXXXXXXXXXXXXXXXXXXXXYFIPDVESLAQLREKYCIQCLETLGEYVEVLGPVLHEKG 566
+PD+ESLAQL+EKYCIQCLE LGEYVEVLGPVLHEKG
Sbjct: 484 VTSDQTTDVSEVS----------LPDIESLAQLQEKYCIQCLEILGEYVEVLGPVLHEKG 533
Query: 567 VDVCLALLQRSSKYEEESKVAMLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRNN 626
VDVC+ LL+R+S+ ++ S V+ LLPDVMKLICALAAHRKFAA+FV+R G+ KLLAVPR +
Sbjct: 534 VDVCIVLLERTSQLDDRSTVSPLLPDVMKLICALAAHRKFAAMFVERRGILKLLAVPRVS 593
Query: 627 QTFFGLSSCLFTIGSLQGIMERVCALPTDVVHQLVELAIQLLECTQDQARKNXXXXXXXX 686
+TF+GLSSCL+TIGSLQGIMERVCALP V+HQ+V+LAI+LL+C+QDQARKN
Sbjct: 594 ETFYGLSSCLYTIGSLQGIMERVCALPLVVIHQVVKLAIELLDCSQDQARKNSALFFAAA 653
Query: 687 XXXXXXXXXXXXQDGLQKLLGLLNDAASVRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSE 746
QD LQKLL +L DAASVR+G N DRS PEV+TSSE
Sbjct: 654 FVFRAILDAFDAQDSLQKLLAILKDAASVRTGANT-------------DRSAPEVMTSSE 700
Query: 747 KQIAYHTCVALRQYFRAHLLLLVDSIRPNKSNRSAGRNI--PNVRAAYKPLDISNEAIDA 804
KQ+A+HTC ALRQYFRAHLLLLVDSIRP++ +R + PN+RAAYKPLDISNEA+DA
Sbjct: 701 KQMAFHTCFALRQYFRAHLLLLVDSIRPSRISRGGVPSSMKPNIRAAYKPLDISNEAVDA 760
Query: 805 VFLQLQKDRKLGPALVRTRWPAVDRFLSLNGHITLLELCQAPPVERYLHDLLQYALGVLH 864
+FLQLQKDR+LGP V+ +WPAV+ FL+ +GH+T+LELCQ PPV+RYLHDLLQYA GVLH
Sbjct: 761 IFLQLQKDRRLGPTFVKAQWPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLH 820
Query: 865 IVTLVPNSRKMIVNATLSNNHTGIAVILDAANAVSSYVDPEIIQPALNVLINLVCPPPSI 924
IVT +P+ RK I +ATLSNN GIAVILDAAN +S VDPEIIQPALNVLINLVCPPPS+
Sbjct: 821 IVTSIPDGRKAIAHATLSNNRAGIAVILDAANISNSIVDPEIIQPALNVLINLVCPPPSL 880
Query: 925 SNKPPLLAQGQQSVSGQTSNGPSME 949
SNKPPL AQ Q V GQ + PS +
Sbjct: 881 SNKPPL-AQNHQPVPGQATTRPSTD 904
Score = 1586 (563.4 bits), Expect = 0., Sum P(5) = 0.
Identities = 324/513 (63%), Positives = 381/513 (74%)
Query: 1310 SKSNPDTDSQSKTPIALPMKRKL---SELKDTGLSLSGKRLHTGDLGLRSPSCPTPN--- 1363
S S+P S+T L +K L ++ K T +S KR + LR S P
Sbjct: 1269 SNSDPALADTSETAAELVLKNDLDADAQFK-TPISFPRKRKLSE---LRDSSVPGKRIDL 1324
Query: 1364 SVRKSSLLNDPQGFSTPGSLAEYLDDNQCGNYHAGQATPSFQLGALNDPQPSNSERITLD 1423
R++S D G TP S LD NQ G+ GQ TP+ QL +DPQPSN ER++LD
Sbjct: 1325 GERRNSTFADGSGLQTPASA---LDANQSGSSRLGQMTPASQLRLPSDPQPSNPERLSLD 1381
Query: 1424 SLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEPKRSLDAPSNVTARLGTREFKSTYSG 1483
SLVVQYLKHQHRQC A VCPEPKR L+AP N+T RLGTRE +S YSG
Sbjct: 1382 SLVVQYLKHQHRQCLAPITTLPPVSLLHPHVCPEPKRLLEAPLNMTGRLGTRELQSFYSG 1441
Query: 1484 VHRNRRDRQFVYSRFRPWRTCRDDAGALLTCITFLGDSSHIAVGSHTKELKIFDSNSSSP 1543
VH NRRDRQFV+SRF+ WR+ RD+ AL TCI LG ++HIAVGSH E+KIF+++S S
Sbjct: 1442 VHGNRRDRQFVFSRFKSWRSFRDET-ALFTCIALLGGTNHIAVGSHAGEIKIFEASSGSM 1500
Query: 1544 LESCTSHQAPVTLVQSHLSGETQLLLSSSSQDVHLWNASSIAGGPMHSFEGCKAARFSNS 1603
LES + HQAPVTLVQ ++S +TQLLLSSSS DV LW+ASSI GGP HSF+GCKAA+FSNS
Sbjct: 1501 LESVSGHQAPVTLVQPYVSRDTQLLLSSSSSDVQLWDASSITGGPRHSFDGCKAAKFSNS 1560
Query: 1604 GNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNLTGRGHAYSQIHFSPSDTMLLWNG 1663
G FAAL E S + +LLYD+QT KL+DT + R + YS +HFSP DT++LWNG
Sbjct: 1561 GLQFAALSCEASRKDVLLYDVQTCSPCQKLTDTVTS--SRSNPYSLVHFSPCDTLILWNG 1618
Query: 1664 ILWDRRNSVPVHRFDQFTDHGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTTITF 1723
+LWDRR V RFDQFTD+GGGGFHP+ NEVIINSE+WD+R F+LLRSVPSLDQT ITF
Sbjct: 1619 VLWDRRIPEKVRRFDQFTDYGGGGFHPSRNEVIINSEIWDMRTFKLLRSVPSLDQTAITF 1678
Query: 1724 NARGDVIYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRCVLDFAT 1783
N+RGDVIYA+LRRN+EDVMSAVHTRRVKHPLFAAFRT+DAINYSDIATIPVDRC+LDFAT
Sbjct: 1679 NSRGDVIYAMLRRNIEDVMSAVHTRRVKHPLFAAFRTLDAINYSDIATIPVDRCLLDFAT 1738
Query: 1784 ERTDSFVGLITMDDQEDMFSSARIYEIGRRRPT 1816
E TDSF+GLITM+DQEDMFSSAR+YEIGRRRPT
Sbjct: 1739 EPTDSFLGLITMEDQEDMFSSARMYEIGRRRPT 1771
Score = 647 (232.8 bits), Expect = 0., Sum P(5) = 0.
Identities = 134/217 (61%), Positives = 167/217 (76%)
Query: 32 ETKKVEEELMAKAQKLMEKITSSPDNPNPSVLHALSSLFEIQESLYLEESGFSSNNARAS 91
E + VE+EL+AKAQKLME ITS +NPNP++LHALS L E QESL+LEE+G SN AR S
Sbjct: 42 EEQSVEDELIAKAQKLMEDITSVANNPNPNILHALSQLLESQESLFLEENGHFSN-ARGS 100
Query: 92 HNIGRLGNLVRENDDFFELISSKFLSESRYSTSVQAAAARLVLSCSLTWIYPHAFEEPVV 151
HN G+L L+REND+FFELISS FLSE+ YST+V+AA+ARL+++CSLTW+YPH F++ V
Sbjct: 101 HNSGKLCILIRENDEFFELISSTFLSENSYSTAVKAASARLLMNCSLTWMYPHVFDDAVT 160
Query: 152 DNVKNWVMDETARLSCEDRHLKHHMSRKEASDSEMLKTYATGLLAVCLAGGGQVVEDVLT 211
+N KNWVM+E + ED ++KEASD EMLKTY+TGLLA+ LA GQ+VEDVLT
Sbjct: 161 ENFKNWVMEEAVKFPGEDS------AKKEASDFEMLKTYSTGLLALSLASRGQIVEDVLT 214
Query: 212 SGLSAKLMRYLRIRVLGETSQKDANHLAESKNSASAT 248
SGLSAKLM YLR+RVL E S H E+K+ + T
Sbjct: 215 SGLSAKLMHYLRVRVLKEPSTSRI-HTTETKHVSLKT 250
Score = 594 (214.2 bits), Expect = 0., Sum P(5) = 0.
Identities = 134/263 (50%), Positives = 157/263 (59%)
Query: 1007 GLVGDRRISXXXXXXXXXXXXXXXXXYRQAREAVRANNGIKVLLHLLQPRIY-SPPXXXX 1065
GLVGDRRI YRQAREAVR N+GIK+LL LLQPRIY +PP
Sbjct: 926 GLVGDRRIFLGAGTGSAGLAAKLEQVYRQAREAVRGNDGIKILLKLLQPRIYVNPPATPD 985
Query: 1066 XXXXXXXXXXXXXXXDDTIAHILTKLQVGKKLSELIRDSGGQTPATEQGRWQAELSQVAI 1125
DDTIA ILTKL+VGK LSELIRDSGGQ+ T+QGRWQAEL+QVA+
Sbjct: 986 CLRALACRVLLGLARDDTIAQILTKLEVGKSLSELIRDSGGQSSGTDQGRWQAELAQVAL 1045
Query: 1126 ELIAIVTNSGRXXXXXXXXXXXXXLXXXXXXXXXXXTPISYHSRELLLLIHEHLQASGLV 1185
ELI IVTNSG L TPI+Y S+ELLLLIHEHLQASGL
Sbjct: 1046 ELIGIVTNSGHATTLTASDAATPTLRRIERAAIAAATPITYDSKELLLLIHEHLQASGLG 1105
Query: 1186 TTAAQLLKEAQLTXXXXXXXXXXXXHQISTQE--SPSIQIQWPSGRS-PGFLTGKSKLAA 1242
TA+ LLKEAQLT + +TQE +P Q QWPSGR+ GF T K K+ A
Sbjct: 1106 DTASALLKEAQLTPLPSSASPSSIAYS-TTQEMSTPLAQEQWPSGRANSGFFTSKPKVCA 1164
Query: 1243 RDEDISLKCDSSMSSKKKQLVFS 1265
DED + + ++++S+KKK L S
Sbjct: 1165 HDEDPNSRSNAALSAKKKHLASS 1187
Score = 437 (158.9 bits), Expect = 2.8e-275, Sum P(5) = 2.8e-275
Identities = 126/328 (38%), Positives = 172/328 (52%)
Query: 177 SRKEASDSEMLKTYATGLLAVCLAGGGQVVEDVLTSGLSAKLMRYLRIRVLGETSQKDAN 236
++KEASD EMLKTY+TGLLA+ LA GQ+VEDVLTSGLSAKLM YLR+RVL E S
Sbjct: 180 AKKEASDFEMLKTYSTGLLALSLASRGQIVEDVLTSGLSAKLMHYLRVRVLKEPSTSRI- 238
Query: 237 HLAESKNSASATSXXXXXXXXXXXXQILEHPDERTIDERSLDDQDIERVTHGDECGADDG 296
H E+K+ + T +I++ T++ D +E G E G D
Sbjct: 239 HTTETKHVSLKTKEEGRSRVR----KIVD-----TVE----GDHVLE-TDSGREMGQTDV 284
Query: 297 EPHDGLAAGIDMSEAY--TDAREGKTKLGDNDETGRDDSSRRRMNRGWIRSRGKGRINEG 354
+P DG ID + + + + K K GD D + RDD SR R+NR +SRG+GR++EG
Sbjct: 285 QP-DG-EFEIDGRDVFNVSGVVDCKIKPGD-DNSVRDDPSRHRLNRS--KSRGRGRVHEG 339
Query: 355 AIETDQGLTSPVSGSRLGQVRSIRDRSVSKSSDTKKAPDGRKHSGTIGSDGVFMEREDGD 414
A +T+ L SP RLG++ +RDR +SK SD + A D G + S + +ERED D
Sbjct: 340 APDTEVLLASP----RLGRLL-VRDRDLSKISDGRNAEDVTVCLGKMKSGIMEIEREDND 394
Query: 415 DCFQECRVGSKDISDMXXXXXXXXXXXXXXXNAPLXXXXXXXXXXXXXXXXXXXXXFKTT 474
+CFQ C +G+K+I+D+ +AP FK++
Sbjct: 395 ECFQGCIIGTKNITDLVKRAVGAAETEARAAHAPDDAAKAAGDAAAELVKTAALEEFKSS 454
Query: 475 NDEDXXXXXXXXXXXTVIDAADAVEVSR 502
E+ TVIDAA EVSR
Sbjct: 455 GSEEAAVSAATRAAITVIDAA---EVSR 479
Score = 235 (87.8 bits), Expect = 9.7e-258, Sum P(4) = 9.7e-258
Identities = 70/174 (40%), Positives = 94/174 (54%)
Query: 1214 STQESPS--IQIQWPSGRSP-GFLTGKSKLAARDEDISLKCDSSMSSKKKQLVFSPSFNL 1270
ST E P+ Q QWPSGR+ GF K+ ARDED S + +++ S+KKKQL FSPSF+
Sbjct: 1187 STLEMPTPVAQQQWPSGRANCGFCPSIPKINARDEDPSSRGNAAPSAKKKQLTFSPSFSS 1246
Query: 1271 XXXXXXXXXXXXTPSSRKV--FSNSKQSAVPSVLEIPHESVSKSNPDTDSQSKTPIALPM 1328
S++++ SNS A+ E E V K++ D D+Q KTPI+ P
Sbjct: 1247 QSRKQSFSHDALPQSTQRINCCSNS-DPALADTSETAAELVLKNDLDADAQFKTPISFPR 1305
Query: 1329 KRKLSELKDTGLSLSGKRLHTGDLGLRSPSCPTPNSVRKSSLLNDPQGFSTPGS 1382
KRKLSEL+D+ S+ GKR+ DLG R++S D G TP S
Sbjct: 1306 KRKLSELRDS--SVPGKRI---DLG-----------ERRNSTFADGSGLQTPAS 1343
Score = 58 (25.5 bits), Expect = 0., Sum P(5) = 0.
Identities = 8/20 (40%), Positives = 17/20 (85%)
Query: 1900 DEDEDSQLVESLSSGDEEDF 1919
D+D+D ++ + +SSG+E+D+
Sbjct: 1857 DDDDDGEMQDFMSSGEEDDY 1876
Score = 50 (22.7 bits), Expect = 3.1e-238, Sum P(4) = 3.1e-238
Identities = 32/142 (22%), Positives = 59/142 (41%)
Query: 1283 TPSSRKVFSNSKQSAVPSVLEIPHESVSKSNPDTDSQSKTPIALPMKRKLSELKDTGLSL 1342
T S + +A P++ I +++ + P T + + + + S L DT +L
Sbjct: 1052 TNSGHATTLTASDAATPTLRRIERAAIAAATPITYDSKELLLLIHEHLQASGLGDTASAL 1111
Query: 1343 SGKRLHTGDLGLRSPSCPTPNSVRKSSLLNDPQGFSTPGSLAEYLDDNQCGNYHAGQATP 1402
K L PS +P+S+ S+ Q STP LA+ + G ++G T
Sbjct: 1112 L-KEAQLTPL----PSSASPSSIAYSTT----QEMSTP--LAQ--EQWPSGRANSGFFTS 1158
Query: 1403 SFQLGALNDPQPSNSERITLDS 1424
++ A +D P++ L +
Sbjct: 1159 KPKVCA-HDEDPNSRSNAALSA 1179
Score = 41 (19.5 bits), Expect = 9.4e-58, Sum P(3) = 9.4e-58
Identities = 18/51 (35%), Positives = 20/51 (39%)
Query: 284 RVTHGDECGADDGEPHDGLAAGIDMSEAYTDAREGKTKLGDNDETGRDDSS 334
R T D DD E D D E D G GDN ++G DD S
Sbjct: 1769 RPTDDDSDPDDDDETED--EDEDDEEEDDLDRILGLA--GDNSDSGDDDLS 1815
Score = 40 (19.1 bits), Expect = 1.2e-57, Sum P(3) = 1.2e-57
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 356 IETDQGLTSPVSGSRLGQVRSIRDRSVSKSSDTKKAPDGRKHSGTIGSDG 405
++ D +P+S R ++ +RD SV K+ G + + T +DG
Sbjct: 1291 LDADAQFKTPISFPRKRKLSELRDSSVPG----KRIDLGERRNSTF-ADG 1335
Score = 40 (19.1 bits), Expect = 4.3e-57, Sum P(2) = 4.3e-57
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 269 ERTIDERSLDDQDIERVTHGDECGADDGEPHDGLAAG 305
E I+ + DD + E DE DDGE D +++G
Sbjct: 1840 EELIEGENEDDGNGE-----DEDDDDDGEMQDFMSSG 1871
Score = 39 (18.8 bits), Expect = 4.0e-236, Sum P(4) = 4.0e-236
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 715 VRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHT 753
+ + A +G ++S L+ + P ++S IAY T
Sbjct: 1095 IHEHLQASGLGDTASALLKEAQLTPLPSSASPSSIAYST 1133
Score = 38 (18.4 bits), Expect = 5.7e-237, Sum P(4) = 5.7e-237
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 970 SDLRERNVDSSLLDRGSSANTQLA 993
S+LR+ +V +D G N+ A
Sbjct: 1310 SELRDSSVPGKRIDLGERRNSTFA 1333
Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 36 VEEELMAKAQKLMEKITSSPDNPNP 60
VE++ A + + ++ +S PNP
Sbjct: 14 VEDDQSVVAAEAIAELANSTGEPNP 38
>UNIPROTKB|Q9Y4B6 [details] [associations]
symbol:VPRBP "Protein VPRBP" species:9606 "Homo sapiens"
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR017986 InterPro:IPR006594
InterPro:IPR015943 InterPro:IPR016024 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00667 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900 GO:GO:0019048
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567
eggNOG:NOG237621 KO:K11789 EMBL:AB018343 EMBL:BC022792
EMBL:BC110371 EMBL:AL080145 EMBL:AF061935 IPI:IPI00181396
IPI:IPI00329528 IPI:IPI00794498 PIR:T12529 RefSeq:NP_001165375.1
RefSeq:NP_055518.1 UniGene:Hs.716623 ProteinModelPortal:Q9Y4B6
SMR:Q9Y4B6 DIP:DIP-47048N IntAct:Q9Y4B6 STRING:Q9Y4B6
PhosphoSite:Q9Y4B6 DMDM:147742890 PaxDb:Q9Y4B6 PRIDE:Q9Y4B6
Ensembl:ENST00000335891 Ensembl:ENST00000563997
Ensembl:ENST00000566027 GeneID:9730 KEGG:hsa:9730 UCSC:uc003dbe.2
UCSC:uc021wys.1 CTD:9730 GeneCards:GC03M051433 HGNC:HGNC:30911
HPA:HPA036142 neXtProt:NX_Q9Y4B6 PharmGKB:PA142670621
HOGENOM:HOG000007026 HOVERGEN:HBG108659 InParanoid:Q9Y4B6
GenomeRNAi:9730 NextBio:36604 Bgee:Q9Y4B6 CleanEx:HS_VPRBP
Genevestigator:Q9Y4B6 Uniprot:Q9Y4B6
Length = 1507
Score = 532 (192.3 bits), Expect = 2.5e-78, Sum P(5) = 2.5e-78
Identities = 135/402 (33%), Positives = 203/402 (50%)
Query: 1421 TLDSLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEPKRSLDAPSNVTARLGTREFKST 1480
TLDS++ +YL+ QH +C CPEPK+ AP N T+RL R
Sbjct: 1003 TLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPK 1062
Query: 1481 YSGVHRNRRDRQFVYSRFRP---WRTCRDDAGALLTCITFLGDSSHIAVGSHTKELKIFD 1537
Y GV DR ++SRFRP +R +D TC F + +G+ T +LK+++
Sbjct: 1063 YGGVDGGCFDRHLIFSRFRPISVFREANEDESGF-TCCAFSARERFLMLGTCTGQLKLYN 1121
Query: 1538 SNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSSSQDVH-LWNASSIAGGPMHSFEGCK 1596
S S H + +T ++ G L ++ SQ + LW S+ HSF
Sbjct: 1122 VFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFD-MKHSFTEDH 1180
Query: 1597 AARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNLTGRGHAYSQIHFSPSD 1656
FS + T+ I YDIQT L + + + + F+P+D
Sbjct: 1181 YVEFSKHSQ-DRVIGTKGDIAHI--YDIQTGNKLLTLFNPDL---ANNYKRNCATFNPTD 1234
Query: 1657 TMLLWNGILWDRRNSVPVHRFDQFTDHGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSL 1716
++L +G+LWD R++ +H+FD+F + G FHP G EVIIN+E+WDLR F LL +VP+L
Sbjct: 1235 DLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPAL 1294
Query: 1717 DQTTITFNARGDVIY-AILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVD 1775
DQ + FN G V+Y A+L+ + ED + R+K P ++FRT +A +Y IATI V
Sbjct: 1295 DQCRVVFNHTGTVMYGAMLQADDEDDLME---ERMKSPFGSSFRTFNATDYKPIATIDVK 1351
Query: 1776 RCVLDFATERTDSFVGLITMDDQED---MFSSARIYEIGRRR 1814
R + D T+ D ++ +I D M + R+YE+GR+R
Sbjct: 1352 RNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQR 1393
Score = 292 (107.8 bits), Expect = 2.5e-78, Sum P(5) = 2.5e-78
Identities = 106/388 (27%), Positives = 177/388 (45%)
Query: 539 LREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAMLLPDVMKLIC 598
+ ++ +Q L LGEY E+L P+ + G L+ ++ + V +L + +K +
Sbjct: 325 IEQRLILQYLTPLGEYQELL-PIFMQLG---SRELMMFYIDLKQTNDV-LLTFEALKHLA 379
Query: 599 ALAAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMERVCALPTDVVH 658
+L H KFA FV GG+QKLL +PR + G+S CL+ + Q MERVC P +V+
Sbjct: 380 SLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLS 439
Query: 659 QLVELAIQLLECTQDQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLGLLNDAASVRSG 718
+V + L+EC+ + DGL++L+ L++ + +
Sbjct: 440 DVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLIS-TLEILNL 498
Query: 719 VNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSN 778
+ GA+ L +D E+ S +Q HTC+ALR+YF AHL + ++ ++ +
Sbjct: 499 EDQGAL-------LSDD----EIFAS--RQTGKHTCMALRKYFEAHLAIKLEQVKQSLQ- 544
Query: 779 RSAGRNIPNVRAAYKPLDISNEAIDAV--FLQLQKDRKL--GPALVRTRWPAVDRFLSLN 834
R+ G + + + YK ++E I + FL +L PA V + V L L
Sbjct: 545 RTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLI 604
Query: 835 GHITLLELCQAP-PVERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNNHTGIAVILD 893
+ A R+ D+L V I + S ++ A + + GI++IL
Sbjct: 605 SIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILG 664
Query: 894 AANAVSSYVDPEIIQPALNVLINLVCPP 921
A D EI + AL ++IN VC P
Sbjct: 665 VAEGEFFIHDAEIQKSALQIIINCVCGP 692
Score = 106 (42.4 bits), Expect = 2.5e-78, Sum P(5) = 2.5e-78
Identities = 46/160 (28%), Positives = 67/160 (41%)
Query: 1040 VRANNGIKVLLHLLQPRIYSPPXXXXXXXXXXXXXXXXXXXDDTIAHILTKLQVGK--KL 1097
V++NNGIKVLL LL I P T+ I++KL + ++
Sbjct: 729 VQSNNGIKVLLSLLS--IKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQI 786
Query: 1098 SELIRDSGGQTPATEQGRWQAELSQVAIELIAIVTNSGRXXXXXXXXXXXXXLXXXXXXX 1157
+L+++ Q ++ + + A ELI V SG+ L
Sbjct: 787 QQLMKEPVLQDKRSDH----VKFCKYAAELIERV--SGKPLLIGTDVS----LARLQKAD 836
Query: 1158 XXXXTPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQL 1197
+ IS+ +ELLLLI HL + GL TA L KEA L
Sbjct: 837 VVAQSRISFPEKELLLLIRNHLISKGLGETATVLTKEADL 876
Score = 66 (28.3 bits), Expect = 2.5e-78, Sum P(5) = 2.5e-78
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 49 EKITSSPDNPNPSVLHALSSLFEIQESLYL--EESGFSSNNARASHNIGRLGNLVR---E 103
EK S + P +L +S L E + Y + F + + LG+L+R +
Sbjct: 22 EKEHGSGQDMVP-ILTRMSQLIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFK 80
Query: 104 NDDFFELISSKFLSESRYSTSVQAAAARLVLSC--SLTWIYPHAFEEPVVDNVKNWVMD 160
NDDF + + ++ SR + AA RL+L L +E +V+N+ W +
Sbjct: 81 NDDFMNALVNAYVMTSR-EPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWARE 138
Score = 50 (22.7 bits), Expect = 1.2e-76, Sum P(5) = 1.2e-76
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 161 ETARLSCEDRHLKHHMSRKEASDSEMLKTYATGLLAVCLAGGGQVVEDVLT------SGL 214
ETA + E + ++ + + L+TY+TGLL GG +D+ S L
Sbjct: 117 ETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLL-----GGAMENQDIAANYRDENSQL 171
Query: 215 SAKLMRYLRIRVLGETSQKDAN 236
A ++R LR L E + + N
Sbjct: 172 VAIVLRRLRELQLQEVALRQEN 193
Score = 45 (20.9 bits), Expect = 1.9e-46, Sum P(4) = 1.9e-46
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 700 DGLQKLLGLLN------DAASVRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQ 748
+G++ LL LL+ DA +R+ VGLS S+++R S + +S + Q
Sbjct: 733 NGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQ 787
Score = 42 (19.8 bits), Expect = 2.5e-78, Sum P(5) = 2.5e-78
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1895 IVTEGDEDEDSQLVESLSSGDEED 1918
+ + DE+ED + E D+ED
Sbjct: 1394 LAEDEDEEEDQEEEEQEEEDDDED 1417
Score = 38 (18.4 bits), Expect = 7.3e-50, Sum P(4) = 7.3e-50
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 87 NARAS-HNIGRLGNLVRENDDFFELIS 112
N ++S H + ++ N+V+ N+ L+S
Sbjct: 714 NPKSSEHTLAKMWNVVQSNNGIKVLLS 740
>MGI|MGI:2445220 [details] [associations]
symbol:Vprbp "Vpr (HIV-1) binding protein" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR006594
InterPro:IPR015943 InterPro:IPR016024 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00667 UniPathway:UPA00143
MGI:MGI:2445220 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 eggNOG:NOG237621
KO:K11789 OMA:FNMTISG GeneTree:ENSGT00390000005874
UniGene:Mm.440089 CTD:9730 HOGENOM:HOG000007026 HOVERGEN:HBG108659
EMBL:BC065119 EMBL:AK122372 EMBL:AK029372 EMBL:AK135721
IPI:IPI00420227 IPI:IPI00467958 IPI:IPI00653483 IPI:IPI00845613
RefSeq:NP_001015507.1 UniGene:Mm.489783 ProteinModelPortal:Q80TR8
SMR:Q80TR8 IntAct:Q80TR8 STRING:Q80TR8 PhosphoSite:Q80TR8
PaxDb:Q80TR8 PRIDE:Q80TR8 Ensembl:ENSMUST00000055009
Ensembl:ENSMUST00000159645 Ensembl:ENSMUST00000161758 GeneID:321006
KEGG:mmu:321006 UCSC:uc009rkp.2 InParanoid:Q80TR8 OrthoDB:EOG4VDPXN
ChiTaRS:VPRBP NextBio:397851 Bgee:Q80TR8 CleanEx:MM_VPRBP
Genevestigator:Q80TR8 Uniprot:Q80TR8
Length = 1506
Score = 531 (192.0 bits), Expect = 6.7e-78, Sum P(5) = 6.7e-78
Identities = 135/402 (33%), Positives = 203/402 (50%)
Query: 1421 TLDSLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEPKRSLDAPSNVTARLGTREFKST 1480
TLDS++ +YL+ QH +C CPEPK+ AP N T+RL R
Sbjct: 1002 TLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPK 1061
Query: 1481 YSGVHRNRRDRQFVYSRFRP---WRTCRDDAGALLTCITFLGDSSHIAVGSHTKELKIFD 1537
Y GV DR ++SRFRP +R +D TC F + +G+ T +LK+++
Sbjct: 1062 YGGVDGGCFDRHLIFSRFRPISVFREANEDESGF-TCCAFSARERFLMLGTCTGQLKLYN 1120
Query: 1538 SNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSSSQDVH-LWNASSIAGGPMHSFEGCK 1596
S S H + +T ++ G L ++ SQ + LW S+ HSF
Sbjct: 1121 VFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFD-MKHSFTEDH 1179
Query: 1597 AARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNLTGRGHAYSQIHFSPSD 1656
FS + T+ I YDIQT L + + + + F+P+D
Sbjct: 1180 YVEFSKHSQ-DRVIGTKGDIAHI--YDIQTGNKLLTLFNPDL---ANNYKRNCATFNPTD 1233
Query: 1657 TMLLWNGILWDRRNSVPVHRFDQFTDHGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSL 1716
++L +G+LWD R++ +H+FD+F + G FHP G EVIIN+E+WDLR F LL +VP+L
Sbjct: 1234 DLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPAL 1293
Query: 1717 DQTTITFNARGDVIY-AILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVD 1775
DQ + FN G V+Y A+L+ + ED + R+K P ++FRT +A +Y IATI V
Sbjct: 1294 DQCRVVFNHTGTVMYGAMLQADDEDDLLE---ERMKSPFGSSFRTFNATDYKPIATIDVK 1350
Query: 1776 RCVLDFATERTDSFVGLITMDDQED---MFSSARIYEIGRRR 1814
R + D T+ D ++ +I D M + R+YE+GR+R
Sbjct: 1351 RNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQR 1392
Score = 292 (107.8 bits), Expect = 6.7e-78, Sum P(5) = 6.7e-78
Identities = 106/388 (27%), Positives = 177/388 (45%)
Query: 539 LREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAMLLPDVMKLIC 598
+ ++ +Q L LGEY E+L P+ + G L+ ++ + V +L + +K +
Sbjct: 324 IEQRLILQYLTPLGEYQELL-PIFMQLG---SRELMMFYIDLKQTNDV-LLTFEALKHLA 378
Query: 599 ALAAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMERVCALPTDVVH 658
+L H KFA FV GG+QKLL +PR + G+S CL+ + Q MERVC P +V+
Sbjct: 379 SLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLS 438
Query: 659 QLVELAIQLLECTQDQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLGLLNDAASVRSG 718
+V + L+EC+ + DGL++L+ L++ + +
Sbjct: 439 DVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLIS-TLEILNL 497
Query: 719 VNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSN 778
+ GA+ L +D E+ S +Q HTC+ALR+YF AHL + ++ ++ +
Sbjct: 498 EDQGAL-------LSDD----EIFAS--RQTGKHTCMALRKYFEAHLAIKLEQVKQSLQ- 543
Query: 779 RSAGRNIPNVRAAYKPLDISNEAIDAV--FLQLQKDRKL--GPALVRTRWPAVDRFLSLN 834
R+ G + + + YK ++E I + FL +L PA V + V L L
Sbjct: 544 RTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLI 603
Query: 835 GHITLLELCQAP-PVERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNNHTGIAVILD 893
+ A R+ D+L V I + S ++ A + + GI++IL
Sbjct: 604 SIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSAVSTVGISIILG 663
Query: 894 AANAVSSYVDPEIIQPALNVLINLVCPP 921
A D EI + AL ++IN VC P
Sbjct: 664 VAEGEFFIHDAEIQKSALQIIINCVCGP 691
Score = 103 (41.3 bits), Expect = 6.7e-78, Sum P(5) = 6.7e-78
Identities = 45/160 (28%), Positives = 67/160 (41%)
Query: 1040 VRANNGIKVLLHLLQPRIYSPPXXXXXXXXXXXXXXXXXXXDDTIAHILTKLQVGK--KL 1097
V++NNGIKVLL LL I P T+ I++KL + ++
Sbjct: 728 VQSNNGIKVLLSLLS--IKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQI 785
Query: 1098 SELIRDSGGQTPATEQGRWQAELSQVAIELIAIVTNSGRXXXXXXXXXXXXXLXXXXXXX 1157
+L+++ Q ++ + + A ELI V SG+ L
Sbjct: 786 QQLMKEPVLQDKRSDH----VKFCKYAAELIERV--SGKPLLIGTDVS----LARLQKAD 835
Query: 1158 XXXXTPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQL 1197
+ IS+ +ELLLLI HL + GL TA L +EA L
Sbjct: 836 VVAQSRISFPEKELLLLIRNHLISKGLGETATVLTREADL 875
Score = 66 (28.3 bits), Expect = 6.7e-78, Sum P(5) = 6.7e-78
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 49 EKITSSPDNPNPSVLHALSSLFEIQESLYL--EESGFSSNNARASHNIGRLGNLVR---E 103
EK S + P +L +S L E + Y + F + + LG+L+R +
Sbjct: 22 EKDHGSGQDMVP-ILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFK 80
Query: 104 NDDFFELISSKFLSESRYSTSVQAAAARLVLSC--SLTWIYPHAFEEPVVDNVKNWVMD 160
NDDF + + ++ SR + AA RL+L L +E +V+N+ W +
Sbjct: 81 NDDFMNALVNAYVMTSR-EPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWARE 138
Score = 52 (23.4 bits), Expect = 5.4e-53, Sum P(5) = 5.4e-53
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 772 IRPNKSNRSAGRNIPNVRAAYKPLDISNEAIDAVFLQLQKDR--KLGPALVRTRW----- 824
++ NKS + R N R A + L S+ D VF++L ++ P ++ T +
Sbjct: 263 LKKNKSAKHGDRE--NFRKAKQKLGFSSSDPDRVFVELSNSSWSEMSPWVIGTNYTLYPM 320
Query: 825 -PAVDRFLSLNGHITLL 840
PA+++ L L ++T L
Sbjct: 321 TPAIEQRLILQ-YLTPL 336
Score = 48 (22.0 bits), Expect = 5.0e-76, Sum P(5) = 5.0e-76
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 161 ETARLSCEDRHLKHHMSRKEASDSEMLKTYATGLLAVCLAGGGQVVEDVLT------SGL 214
ETA + E + ++ + + L+TY+TGLL GG +D+ S L
Sbjct: 117 ETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLL-----GGAMENQDIAANYRDENSQL 171
Query: 215 SAKLMRYLRIRVLGETS-QKDANHLAESKNSA 245
A ++R LR L E + ++D+ + K S+
Sbjct: 172 VAIVLRRLRELQLQEVALRQDSKRPSPRKLSS 203
Score = 45 (20.9 bits), Expect = 2.5e-46, Sum P(4) = 2.5e-46
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 700 DGLQKLLGLLN------DAASVRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQ 748
+G++ LL LL+ DA +R+ VGLS S+++R S + +S + Q
Sbjct: 732 NGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQ 786
Score = 42 (19.8 bits), Expect = 6.7e-78, Sum P(5) = 6.7e-78
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1895 IVTEGDEDEDSQLVESLSSGDEED 1918
+ + DE+ED + E D+ED
Sbjct: 1393 LAEDEDEEEDQEEEEQEEEDDDED 1416
Score = 37 (18.1 bits), Expect = 1.7e-45, Sum P(4) = 1.7e-45
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 1241 AARDEDISLKCDSSMSSKKK 1260
++RD +IS + DSS + +
Sbjct: 232 SSRDMEISFRLDSSHKTSSR 251
>RGD|1305176 [details] [associations]
symbol:Vprbp "Vpr (HIV-1) binding protein" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0008180
"signalosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR006594
InterPro:IPR015943 InterPro:IPR016024 PROSITE:PS50896 SMART:SM00667
RGD:1305176 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:2.130.10.10 SUPFAM:SSF50978 OrthoDB:EOG4VDPXN
IPI:IPI00371041 Ensembl:ENSRNOT00000056371 UCSC:RGD:1305176
ArrayExpress:D3ZLJ5 Uniprot:D3ZLJ5
Length = 1512
Score = 512 (185.3 bits), Expect = 8.7e-76, Sum P(5) = 8.7e-76
Identities = 135/408 (33%), Positives = 203/408 (49%)
Query: 1421 TLDSLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEPKRSLDAPSNVTARLGTREFKST 1480
TLDS++ +YL+ QH +C CPEPK+ AP N T+RL R
Sbjct: 1002 TLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPK 1061
Query: 1481 YSGVHRNRRDRQFVYSRFRP---WRTCRDDAGALLTCITFLGDSSHIAVGSHTKELKIFD 1537
Y GV DR ++SRFRP +R +D TC F + +G+ T +LK+++
Sbjct: 1062 YGGVDGGCFDRHLIFSRFRPISVFREANEDESGF-TCCAFSARERFLMLGTCTGQLKLYN 1120
Query: 1538 SNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSSSQDVH-LWNASSIAGGPMHSFEGCK 1596
S S H + +T ++ G L ++ SQ + LW S+ HSF
Sbjct: 1121 VFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFD-MKHSFTEDH 1179
Query: 1597 AARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNLTGRGHAYSQIHFSPSD 1656
FS + T+ I YDIQT L + + + + F+P+D
Sbjct: 1180 YVEFSKHSQ-DRVIGTKGDIAHI--YDIQTGNKLLTLFNPDL---ANNYKRNCATFNPTD 1233
Query: 1657 TMLLWNGILWDRRNSVPVHRFDQFTDHGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSL 1716
++L +G+LWD R++ +H+FD+F + G FHP G EVIIN+E+WDLR F LL +VP+L
Sbjct: 1234 DLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPAL 1293
Query: 1717 DQTTITFNARGDVIY-AILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDI------ 1769
DQ + FN G V+Y A+L+ + ED + R+K P ++FRT +A +Y I
Sbjct: 1294 DQCRVVFNHTGTVMYGAMLQADDEDDLLE---ERMKSPFGSSFRTFNATDYKPIVMFYFS 1350
Query: 1770 ATIPVDRCVLDFATERTDSFVGLITMDDQED---MFSSARIYEIGRRR 1814
ATI V R + D T+ D ++ +I D M + R+YE+GR+R
Sbjct: 1351 ATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQR 1398
Score = 292 (107.8 bits), Expect = 8.7e-76, Sum P(5) = 8.7e-76
Identities = 106/388 (27%), Positives = 177/388 (45%)
Query: 539 LREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAMLLPDVMKLIC 598
+ ++ +Q L LGEY E+L P+ + G L+ ++ + V +L + +K +
Sbjct: 324 IEQRLILQYLTPLGEYQELL-PIFMQLG---SRELMMFYIDLKQTNDV-LLTFEALKHLA 378
Query: 599 ALAAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMERVCALPTDVVH 658
+L H KFA FV GG+QKLL +PR + G+S CL+ + Q MERVC P +V+
Sbjct: 379 SLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLS 438
Query: 659 QLVELAIQLLECTQDQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLGLLNDAASVRSG 718
+V + L+EC+ + DGL++L+ L++ + +
Sbjct: 439 DVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLIS-TLEILNL 497
Query: 719 VNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSN 778
+ GA+ L +D E+ S +Q HTC+ALR+YF AHL + ++ ++ +
Sbjct: 498 EDQGAL-------LSDD----EIFAS--RQTGKHTCMALRKYFEAHLAIKLEQVKQSLQ- 543
Query: 779 RSAGRNIPNVRAAYKPLDISNEAIDAV--FLQLQKDRKL--GPALVRTRWPAVDRFLSLN 834
R+ G + + + YK ++E I + FL +L PA V + V L L
Sbjct: 544 RTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLI 603
Query: 835 GHITLLELCQAP-PVERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNNHTGIAVILD 893
+ A R+ D+L V I + S ++ A + + GI++IL
Sbjct: 604 SIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILG 663
Query: 894 AANAVSSYVDPEIIQPALNVLINLVCPP 921
A D EI + AL ++IN VC P
Sbjct: 664 VAEGEFFIHDAEIQKSALQIIINCVCGP 691
Score = 103 (41.3 bits), Expect = 8.7e-76, Sum P(5) = 8.7e-76
Identities = 45/160 (28%), Positives = 67/160 (41%)
Query: 1040 VRANNGIKVLLHLLQPRIYSPPXXXXXXXXXXXXXXXXXXXDDTIAHILTKLQVGK--KL 1097
V++NNGIKVLL LL I P T+ I++KL + ++
Sbjct: 728 VQSNNGIKVLLSLLS--IKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQI 785
Query: 1098 SELIRDSGGQTPATEQGRWQAELSQVAIELIAIVTNSGRXXXXXXXXXXXXXLXXXXXXX 1157
+L+++ Q ++ + + A ELI V SG+ L
Sbjct: 786 QQLMKEPVLQDKRSDH----VKFCKYAAELIERV--SGKPLLIGTDVS----LARLQKAD 835
Query: 1158 XXXXTPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQL 1197
+ IS+ +ELLLLI HL + GL TA L +EA L
Sbjct: 836 VVAQSRISFPEKELLLLIRNHLISKGLGETATVLTREADL 875
Score = 66 (28.3 bits), Expect = 8.7e-76, Sum P(5) = 8.7e-76
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 49 EKITSSPDNPNPSVLHALSSLFEIQESLYL--EESGFSSNNARASHNIGRLGNLVR---E 103
EK S + P +L +S L E + Y + F + + LG+L+R +
Sbjct: 22 EKDHGSGQDMVP-ILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFK 80
Query: 104 NDDFFELISSKFLSESRYSTSVQAAAARLVLSC--SLTWIYPHAFEEPVVDNVKNWVMD 160
NDDF + + ++ SR + AA RL+L L +E +V+N+ W +
Sbjct: 81 NDDFMNALVNAYVMTSR-EPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWARE 138
Score = 52 (23.4 bits), Expect = 6.8e-51, Sum P(5) = 6.8e-51
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 772 IRPNKSNRSAGRNIPNVRAAYKPLDISNEAIDAVFLQLQKDR--KLGPALVRTRW----- 824
++ NKS + R N R A + L S+ D VF++L ++ P ++ T +
Sbjct: 263 LKKNKSAKHGDRE--NFRKAKQKLGFSSSDPDRVFVELSNSSWSEMSPWVIGTNYTLYPM 320
Query: 825 -PAVDRFLSLNGHITLL 840
PA+++ L L ++T L
Sbjct: 321 TPAIEQRLILQ-YLTPL 336
Score = 49 (22.3 bits), Expect = 5.1e-74, Sum P(5) = 5.1e-74
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 161 ETARLSCEDRHLKHHMSRKEASDSEMLKTYATGLLAVCLAGGGQVVEDVLT------SGL 214
ETA + E + ++ + + L+TY+TGLL GG +D+ S L
Sbjct: 117 ETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLL-----GGAMENQDIAANYRDENSQL 171
Query: 215 SAKLMRYLRIRVLGETSQKDAN 236
A ++R LR L E + + N
Sbjct: 172 VAIVLRRLRELQLQEVALRQDN 193
Score = 45 (20.9 bits), Expect = 3.0e-44, Sum P(4) = 3.0e-44
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 700 DGLQKLLGLLN------DAASVRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQ 748
+G++ LL LL+ DA +R+ VGLS S+++R S + +S + Q
Sbjct: 732 NGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQ 786
Score = 42 (19.8 bits), Expect = 8.7e-76, Sum P(5) = 8.7e-76
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1895 IVTEGDEDEDSQLVESLSSGDEED 1918
+ + DE+ED + E DE+D
Sbjct: 1399 LAEDEDEEEDQEEEEQEEEDDEDD 1422
Score = 40 (19.1 bits), Expect = 9.7e-44, Sum P(4) = 9.7e-44
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 1241 AARDEDISLKCDSSMSSKKK 1260
A+RD +IS + DSS + +
Sbjct: 232 ASRDMEISFRLDSSHKTSSR 251
>FB|FBgn0034641 [details] [associations]
symbol:mahj "mahjong" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0035212 "cell competition in
a multicellular organism" evidence=IMP] InterPro:IPR017986
InterPro:IPR006594 InterPro:IPR015943 InterPro:IPR016024
PROSITE:PS50896 SMART:SM00667 UniPathway:UPA00143 EMBL:AE013599
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0016567 eggNOG:NOG237621 KO:K11789 OMA:FNMTISG
GeneTree:ENSGT00390000005874 EMBL:AY118444 EMBL:BT003172
EMBL:BT016025 RefSeq:NP_001246451.1 RefSeq:NP_611592.2
ProteinModelPortal:Q9W2F2 SMR:Q9W2F2 IntAct:Q9W2F2
MINT:MINT-1651307 STRING:Q9W2F2 PaxDb:Q9W2F2
EnsemblMetazoa:FBtr0071658 EnsemblMetazoa:FBtr0304728 GeneID:37462
KEGG:dme:Dmel_CG10080 UCSC:CG10080-RA CTD:37462 FlyBase:FBgn0034641
InParanoid:Q9W2F2 OrthoDB:EOG4GTHTQ PhylomeDB:Q9W2F2
GenomeRNAi:37462 NextBio:803763 Bgee:Q9W2F2 GO:GO:0035212
Uniprot:Q9W2F2
Length = 1544
Score = 365 (133.5 bits), Expect = 7.5e-60, Sum P(5) = 7.5e-60
Identities = 120/419 (28%), Positives = 193/419 (46%)
Query: 1406 LGALNDPQPSNSERITLDSLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEPKRSLDAP 1465
+G D Q + +RITL+++V +YL +QH C CP+PK S
Sbjct: 1054 VGLAEDGQ-LHPKRITLNTIVTEYLTNQHSLCNNPVTTCPQFDLYEPHKCPDPKPSRLLS 1112
Query: 1466 SNVTARLGTREFKSTYSGVHRNRRDRQFVYSRFRPWRTCRD-DAGAL-LTCITFLGDSSH 1523
SN L +R + T +G + +R DR++V++ F PWR+ R D L TC G +
Sbjct: 1113 SNYN--LTSRHAR-TQAGFNTSRFDRRYVHTHFSPWRSIRSADYEDLEFTCCDLAG--KY 1167
Query: 1524 IAVGSHTKELKIFDSNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSS---SQDVHLWN 1580
I VG+ + ++F+ N H V ++++ +G+ L+++SS + LW
Sbjct: 1168 IIVGTQQGDGRVFNMNDGVEQFFSNCHNFSVDAIKANRAGD--LVITSSFWRTPTSILW- 1224
Query: 1581 ASSIAGGPMHSFEGCKAARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNL 1640
SIA + T + L+DI T A + T NL
Sbjct: 1225 --SIADDEFKLKLRLPDVTYCEFSQTVQDRLLGTQNECATLFDINTGSKVASFTPTIPNL 1282
Query: 1641 TGRGHAYSQIHFSPSDTMLLWNGILWDRRNSVPVHRFDQFTDHGGGGFHPAGNEVIINSE 1700
+ A +D ++L +G+LWD R+ +H+FD+F G FHP E+I N+E
Sbjct: 1283 YTKNRAT----LCRTDELILSDGVLWDVRSGKEIHKFDKFNQCISGVFHPNCLEIIANTE 1338
Query: 1701 VWDLRKFRLLRSVPSLDQTTITFNARGDVIY-AILRRNLEDVMSAVHTRRVKHPLFAAFR 1759
VWDLR F LL++VP LDQ TF+ VIY A L + + M +F
Sbjct: 1339 VWDLRTFHLLQTVPVLDQRNCTFSPM-HVIYGASLGADRDHDMETT-------TYDTSFN 1390
Query: 1760 TVDAINYSDIATIPVDRCVLDFATERTDSFVGLIT----MDDQEDMFSSARIYEIGRRR 1814
+DA +YS IATI V R + D + S + ++ + +++ + +IY +G ++
Sbjct: 1391 VLDAYDYSSIATIDVKRNINDLSVSANGSLIAVVEDYSGYESKQETY--VKIYAVGVKK 1447
Score = 276 (102.2 bits), Expect = 7.5e-60, Sum P(5) = 7.5e-60
Identities = 101/401 (25%), Positives = 173/401 (43%)
Query: 529 FIPDVESLAQLREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAM 588
+IP + A + ++ L +LGEY E L + + L+ + +
Sbjct: 377 YIPLHPATADTSQMLIMRFLTSLGEYQEFLAMAFENNVMQLIFGYLENLDRRD-----TC 431
Query: 589 LLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMER 648
L +V+K + +L H+KFA F+ GG++ LL VPR + G+S ++ + + MER
Sbjct: 432 LAYEVLKYLASLLCHKKFALEFISHGGLELLLKVPRPSLATTGVSIAIYYLAYCEDAMER 491
Query: 649 VCALPTDVVHQLVELAIQLLECTQDQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLGL 708
+C++ ++ +LV A+ +L D ++ + QDGL+KL +
Sbjct: 492 ICSMQRPLISELVRYALWILGRCHDSSKCHATMFFSLSFQFKVILDEFDAQDGLRKLYNV 551
Query: 709 LNDAASVRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLL 768
+ SV ++ S ND E + + +Q+ H CVAL++Y AH
Sbjct: 552 I----SVLKILDP------SHNDSDNDSDFNEDVECASRQMVRHVCVALKRYMEAHFFYK 601
Query: 769 VDSIRPNKSNRSAGRNIPNVRAAYKPLDISNEAIDAVFLQLQKD-RKLGP-ALVRTRWPA 826
+S ++N ++ P +A+ A F QL R L +R W
Sbjct: 602 YNSFLC-QTNAAS----PAPSSAHYFNQNPTVAAKLTFDQLNDQIRTLQEHTSIRAHWQP 656
Query: 827 VDRFLSLNGHITLLELCQAPP--VERYLHDLLQYALGVLHIVTLVPNSRKMIVNATLSNN 884
VD+ + L G LL + V + ++ AL VL + ++P ++ L +
Sbjct: 657 VDQLMKLGGITMLLRIIAFSYDWVNSGRSETVRSALDVLSVCCIIPRVYVVLCERLLMLD 716
Query: 885 HT---GIAVILDAA-NAVSSYVDPEIIQPALNVLINLVCPP 921
T G +L AA +SS D E+I+ AL VL + VC P
Sbjct: 717 KTTTSGFCSVLGAAAGEISS--DAEVIKSALAVLCHCVCSP 755
Score = 111 (44.1 bits), Expect = 7.5e-60, Sum P(5) = 7.5e-60
Identities = 57/214 (26%), Positives = 88/214 (41%)
Query: 1038 EAVRANNGIKVLLHLLQPRIYSPPXXXXXXXXXXXXXXXXXXXDDTIAHILTKLQV--GK 1095
E+V +NNGI VLL L+Q + P D + I++KL +
Sbjct: 791 ESVCSNNGIVVLLSLMQTK--GPITDADCIRGMACRALAGLARSDRVRQIVSKLPLFASG 848
Query: 1096 KLSELIRDSGGQTPATEQGRWQAELSQ-VAIELIAIVTNSGRXXXXXXXXXXXXXLXXXX 1154
+L L+RD P ++ R + + Q A+EL+ V SG+ L
Sbjct: 849 QLQTLMRD-----PILQEKRAEHVIFQKYALELLERV--SGKTKPLNNPLDPS--LSNMH 899
Query: 1155 XXXXXXXTPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQLTXXXXXXXXXXXXHQIS 1214
T I Y+ ++L LI EHL+++GL TA L +E L HQ
Sbjct: 900 KANVIAQTRIQYNKQQLYQLIFEHLESNGLSQTAQMLQREVGLPLQTPTTRSF---HQ-- 954
Query: 1215 TQESPSIQIQWPSGRSPGFLTGKSKLAARDEDIS 1248
SP PSG S +++L +R +D++
Sbjct: 955 ---SPFDYKSLPSGSSS---LSRNRLRSRMQDVN 982
Score = 81 (33.6 bits), Expect = 7.5e-60, Sum P(5) = 7.5e-60
Identities = 53/228 (23%), Positives = 105/228 (46%)
Query: 31 DETKKVEEELMAKAQKLMEKITSSPDNPNPSVLHALSSLFEIQESLYLEESGF---SSNN 87
D + ++EL K ++ T + +P P+ L +L+ +FE ++ +Y + S +
Sbjct: 104 DRRQATKKELTQIIDKWEQQQTQNGYDPVPT-LRSLAEIFEREKDVYRRKDPDPLDSRHP 162
Query: 88 ARA--SHNIGRLGNLVRENDDFFELISSKFLSESRYST-SVQAAAARL-VLSCSLTWIYP 143
RA S G L L+ D F + + +L E+ +S +V ++ L +L+C L
Sbjct: 163 YRADPSCQYGLLLKLLFRKDTFMGKLLNDYLRENYFSRQNVSRSSLELNILACRLI---- 218
Query: 144 HAFEEPVVDNVKNWVMDETARLSCEDRHLKHHMSRKEASDSEMLKTYATGLLAVCLAGGG 203
E ++ ++ + +TA D + S E S E L++YATGLLA +
Sbjct: 219 --LE--IMPGMETSAVFQTAE---GDGTINRIYSWAEDS-IEPLQSYATGLLAEAMEVSD 270
Query: 204 QVVE-DVLTSGLSAKLMRYLRIRV-LGETSQKDANHLAESKNSASATS 249
+ L L K+++ L + + + +++ D N + ++ S+T+
Sbjct: 271 IAINFRDLNIRLVPKMIKRLHMLLAISKSATSDVNTSMHNLSADSSTA 318
Score = 45 (20.9 bits), Expect = 3.9e-56, Sum P(5) = 3.9e-56
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 265 EHPDERTIDERSLDDQDIERVTHGDECGADDGEPHDGLAAGIDMSEAYTDAREGKTKLGD 324
E P+ + E++ D+Q+ + D GEP A D + + +A G+
Sbjct: 42 EQPEAEDMPEQAGDNQEEDAAEQ-----QDGGEPEADEDADADDAMSVENAENESDSGGN 96
Query: 325 NDETGRDDSSRRRMNR 340
+ET D RR+ +
Sbjct: 97 AEETAAAD--RRQATK 110
Score = 38 (18.4 bits), Expect = 7.5e-60, Sum P(5) = 7.5e-60
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 1900 DEDEDSQLVESLSSGDEED 1918
D DED E L S D+ D
Sbjct: 1499 DLDEDDDDGEPLDSDDDSD 1517
Score = 37 (18.1 bits), Expect = 9.6e-60, Sum P(5) = 9.6e-60
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 1900 DEDEDSQLVESLSSGDEE-DF 1919
D D+DS + +GD++ DF
Sbjct: 1511 DSDDDSDDDDGSDNGDDDGDF 1531
Score = 37 (18.1 bits), Expect = 7.2e-26, Sum P(5) = 7.2e-26
Identities = 17/67 (25%), Positives = 26/67 (38%)
Query: 1582 SSIAG-GPMHSFEGCKAARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDTSVNL 1640
SS AG G ++ +G FS+ + +DR + IQ +E SV L
Sbjct: 999 SSPAGAGGSNAGDGVSIPNFSSLNTTQTPIKIRRTDRSSVSRSIQKQAMEP--GGMSVGL 1056
Query: 1641 TGRGHAY 1647
G +
Sbjct: 1057 AEDGQLH 1063
>WB|WBGene00014243 [details] [associations]
symbol:dcaf-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR006594 InterPro:IPR015943
InterPro:IPR016024 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00667 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040010 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0040035
eggNOG:NOG237621 KO:K11789 OMA:FNMTISG EMBL:Z68218 EMBL:Z68222
PIR:B88789 PIR:T23210 RefSeq:NP_501725.2 ProteinModelPortal:Q21106
SMR:Q21106 PaxDb:Q21106 EnsemblMetazoa:ZK1251.9 GeneID:177804
KEGG:cel:CELE_ZK1251.9 UCSC:ZK1251.9 CTD:177804 WormBase:ZK1251.9
GeneTree:ENSGT00390000005874 InParanoid:Q21106 NextBio:898454
Uniprot:Q21106
Length = 1701
Score = 378 (138.1 bits), Expect = 2.2e-44, Sum P(5) = 2.2e-44
Identities = 143/544 (26%), Positives = 245/544 (45%)
Query: 1293 SKQSAVPSVLEIPHESVSKSNPDTDSQSKTPIA---LPMK-RKLSELKDTGLSLSGKRLH 1348
SK +V ++L+ E+ P + S + TPI LP S++ DT +L+ + L
Sbjct: 866 SKLDSVAAMLK--SEAKLPDRPASRSIN-TPILNKPLPSSGNNFSKINDTYPTLAPRTLE 922
Query: 1349 T--GDLGLRSPS----CPTPNSVRKSSLLNDPQGFSTPGSLAEYLDDNQCGNYHAG-QAT 1401
+ G + R PS +P +S +D F+TP Y G + +
Sbjct: 923 SEIGGISARRPSNAASLSSPAMATRSHSTDDDV-FATPTLPRRYTTS---GAFPKKLMIS 978
Query: 1402 PSFQ-LGALNDPQPSNSERIT--LDSLVVQYLKHQHRQCPAXXXXXXXXXXXXXXVCPEP 1458
P+ Q L L + S+ R L+S+V Y ++QH C CPE
Sbjct: 979 PARQKLRPLTPGESSSGYRPIKDLNSIVTDYFRNQHSTCKNPVTTCPPFSLFYQHKCPEL 1038
Query: 1459 KRSLDAPSNVTARLGTREFKSTYSGVHRNRRDRQFVYSRFRPWRTCRDDAGALLTCITFL 1518
+ N++ R +E + V+ + + ++SRFR W+T D + T TF
Sbjct: 1039 SYQTNVVRNISLRTLDQELLRPHERVYSQWTNERTIFSRFRNWKTIHDHDESY-TKATFS 1097
Query: 1519 GDSSHIAVGSHTKELKIFDSNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSSSQDVH- 1577
D H+ VG E+ + ++ H + +T ++ G L S+ S+ +
Sbjct: 1098 VDDEHLIVGLFNGEVHWINVDTGLDEGHTNCHGSALTNIEPSKDGSMMLTSSAFSRPLSA 1157
Query: 1578 LWNASSIAGGPMHSFEGCKAARFSNSGNLFAALPTETSDRGILLYDIQT-YQLEAKLSDT 1636
LW A +H++ +F+N+ + + T D+ + YD +T + L+ LS
Sbjct: 1158 LWRLGE-ALQRVHTYREDSCVKFANT-TMQRIVGT-CRDKATV-YDTETNHVLDTYLS-- 1211
Query: 1637 SVNLTGRGHAYSQIHFSPSDTMLLWNGILWD-RRNSVPVHRFDQFTDHG-GGGFHPAGNE 1694
+ G + + FSP D ++ +G+LWD R+ + +H FD+ + G FHP G +
Sbjct: 1212 --GIDGLQYEKNYASFSPDDKLIFNDGLLWDVRKKNSAIHVFDRLSKITLFGTFHPHGTQ 1269
Query: 1695 VIINSEVWDLRKFRLLRSVPSLDQTTITFNARGDVIYAILRRNLEDVMSAVHTRRVKHPL 1754
++INSEV+D+R FR+L VP L++ ++FN+ G+++YA + DV H +
Sbjct: 1270 IVINSEVYDIRTFRMLHHVPELNRCQVSFNSTGNIMYAT---EVTDV----HCPDYDEKI 1322
Query: 1755 FAAFRTVDAINYSDIATIPVDRCVLDFATERTDSFVGLIT-----MDDQEDMFSSA-RIY 1808
F++FRT + +YS + T R V+D D + +I M D S+ +I
Sbjct: 1323 FSSFRTFETRDYSALTTFEGRRPVIDLCASHQDQKMCVIEKVRPQMSDYMIQASTQLKIV 1382
Query: 1809 EIGR 1812
EIGR
Sbjct: 1383 EIGR 1386
Score = 175 (66.7 bits), Expect = 2.2e-44, Sum P(5) = 2.2e-44
Identities = 61/255 (23%), Positives = 107/255 (41%)
Query: 535 SLAQLREKYCIQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKYEEESKVAMLLPDVM 594
SLA +++ +Q L GEY ++L +++ + E+SK L D +
Sbjct: 317 SLATY-QRFILQYLAACGEYQDLLLQTFEGNALEILFDYIDL-----EKSKDVRLTFDAL 370
Query: 595 KLICALAAHRKFAALFVDRGGMQKLLAVPRNNQTFFGLSSCLFTIGSLQGIMERVCALPT 654
K + +L HRKFA FV++GG+ LL VP+ + G+ +CL+ I +ME +C +
Sbjct: 371 KYLTSLLVHRKFALEFVNKGGIPALLKVPKTSLASVGVVTCLYYIAYSNDVMEILCQMSD 430
Query: 655 DVVHQLVELAIQLLECTQDQARKNXXXXXXXXXXXXXXXXXXXXQDGLQKLLGLLNDAAS 714
++V + V+ + LE + + + DG +KL N A+
Sbjct: 431 EIVDETVQYVLWCLEHSHESGMASACMFFSQGLFYKAILRRFDQYDGPRKLH---NYIAT 487
Query: 715 VRSGVNAGAVGLSSSTSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRP 774
+ N V L+ ++ TS+ Q C R Y AH+ + V++ +
Sbjct: 488 LTLMQNNEDVELTEE----------QIHTST--QCTRGVCTTFRSYLTAHIFIKVENYKK 535
Query: 775 NKSNR-SAGRNIPNV 788
N G P +
Sbjct: 536 LYGNNLPTGMRFPEL 550
Score = 81 (33.6 bits), Expect = 2.2e-44, Sum P(5) = 2.2e-44
Identities = 40/161 (24%), Positives = 61/161 (37%)
Query: 1040 VRANNGIKVLLHLLQPRIYSPPXXXXXXXXXXXXXXXXXXXDDTIAHILTKLQV--GKKL 1097
VR +GI L++L+ +I P + IL KL + L
Sbjct: 731 VRKTDGIMALVNLINCKI--PLTEADSIRKTATNTLTGLARHPEVRQILAKLPLIAHNGL 788
Query: 1098 SELIRDSGGQTPATEQGR-WQAELSQVAIELIAIVTNSGRXXXXXXXXXXXXXLXXXXXX 1156
L+R+ P R A + A++L+ ++ GR
Sbjct: 789 QNLMRE-----PVCSDKRDIHAAFCKEAVQLLQVIY--GRKIHDQQGKEIQSS-EKSHRQ 840
Query: 1157 XXXXXTPISYHSRELLLLIHEHLQASGLVTTAAQLLKEAQL 1197
T +S++ ELL LIH+HL S L + AA L EA+L
Sbjct: 841 WVIENTQVSFNQAELLQLIHDHLLKSKLDSVAAMLKSEAKL 881
Score = 46 (21.3 bits), Expect = 2.2e-44, Sum P(5) = 2.2e-44
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 1900 DEDEDSQLVESLSSGDEEDFIG 1921
DEDEDS ES GD+++ IG
Sbjct: 1406 DEDEDSD--ES-GDGDDDEEIG 1424
Score = 43 (20.2 bits), Expect = 2.2e-44, Sum P(5) = 2.2e-44
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 184 SEMLKTYATGLLAVCLAGGGQVV----EDVLTSGLSAKLMRYLRIRVLGETS---QKDAN 236
+E L+ YA GLLA L E+ L + + L+ R L E Q D +
Sbjct: 162 NETLQGYAMGLLAAALENTENASKYRNENALLVPFGLRRLHELQGRSLEEQKKIGQTDFS 221
Query: 237 HLAESKNSASATS 249
L +++++ TS
Sbjct: 222 QLHAEQSTSNGTS 234
Score = 42 (19.8 bits), Expect = 2.9e-27, Sum P(4) = 2.9e-27
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 325 NDETGRDDSSRRRMNRGWIRSRGKGRINEGAIET---DQGLTSPVSG--SRLGQVRSIRD 379
+D+ G++ S + +R W+ + N+ + D L S + + L + D
Sbjct: 824 HDQQGKEIQSSEKSHRQWVIENTQVSFNQAELLQLIHDHLLKSKLDSVAAMLKSEAKLPD 883
Query: 380 RSVSKSSDT 388
R S+S +T
Sbjct: 884 RPASRSINT 892
Score = 41 (19.5 bits), Expect = 9.7e-31, Sum P(5) = 9.7e-31
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 532 DVESLA-QLREKYCIQCLETL 551
D E+++ LR + C+ LETL
Sbjct: 610 DWENISPSLRTEMCVHALETL 630
Score = 41 (19.5 bits), Expect = 1.6e-09, Sum P(4) = 1.6e-09
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 1366 RKSSLLNDPQGFSTPGSLAEYLDDNQCGNYHAGQATPSFQLGA-LNDPQPSNSERITLDS 1424
R+ L + PGS + D + G+ P F +GA ++D + E + D
Sbjct: 1476 RRQRLNSSENDAELPGS--DEGSDEDGDDDEDGEGDPDFDMGAAIDDLVDAVDEEVDEDE 1533
Query: 1425 L 1425
L
Sbjct: 1534 L 1534
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(4) = 2.5e-09
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 1388 DDNQCGNYHAGQATPSFQLGALNDPQPSNS---ERITLDSL 1425
DD + G + + + LG L D S S + TLD L
Sbjct: 1419 DDEEIGGNSSDRESVFRTLGRLGDESDSGSSVDDNDTLDDL 1459
Score = 37 (18.1 bits), Expect = 4.0e-30, Sum P(5) = 4.0e-30
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 74 ESLYLEESGFSSNNARASHNIGRLGNLVR 102
E++ E F+ ++ R + N+ +LG +VR
Sbjct: 572 EAIVTEMLRFTGSSFREAENLRKLG-MVR 599
>TAIR|locus:2051094 [details] [associations]
symbol:MAC3B "MOS4-associated complex 3B" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0042742
"defense response to bacterium" evidence=IGI] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005618
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0003677
GO:GO:0042742 GO:GO:0006281 eggNOG:COG2319 GO:GO:0006397
GO:GO:0045087 GO:GO:0005681 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AC002332 GO:GO:0080008 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
ProtClustDB:CLSN2687671 EMBL:FJ820118 EMBL:AY080868 IPI:IPI00529157
PIR:C84744 RefSeq:NP_850206.4 RefSeq:NP_850207.4 UniGene:At.44022
ProteinModelPortal:O22785 SMR:O22785 IntAct:O22785 STRING:O22785
PaxDb:O22785 PRIDE:O22785 EnsemblPlants:AT2G33340.1
EnsemblPlants:AT2G33340.2 GeneID:817897 KEGG:ath:AT2G33340
GeneFarm:2867 TAIR:At2g33340 InParanoid:O22785 OMA:QWQELKV
PhylomeDB:O22785 Genevestigator:O22785 Uniprot:O22785
Length = 525
Score = 125 (49.1 bits), Expect = 0.00064, P = 0.00064
Identities = 58/225 (25%), Positives = 96/225 (42%)
Query: 1524 IAVGSHTKELKIFDSNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSSSS-QDVHLW--- 1579
IA G +FD S L + T H VT V+ G++ L+L++S+ + V +W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVK--FVGDSDLVLTASADKTVRIWRNP 294
Query: 1580 -NASSIAGGPM--HSFEGCKAARFSNSGNLFAALPTETSDRGILLYDIQTYQLEAKLSDT 1636
+ + G + HS E +A + F + + D YD+ + A++SD
Sbjct: 295 GDGNYACGYTLNDHSAE-VRAVTVHPTNKYFVSA---SLDGTWCFYDLSSGSCLAQVSDD 350
Query: 1637 SVNLTGRGHAYSQIHFSPSDTMLLWNGI------LWDRRNSVPVHRFDQFTDHGGG-GFH 1689
S N+ Y+ F P D ++L G +WD ++ V +FD T F
Sbjct: 351 SKNVD-----YTAAAFHP-DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS 404
Query: 1690 PAGNEVIINSE----VWDLRKFRLLRSVPSLDQTTITFNARGDVI 1730
G + +E +WDLRK R +S S D ++ F+ G +
Sbjct: 405 ENGYFLATAAEDGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYL 449
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 61/239 (25%), Positives = 105/239 (43%)
Query: 1512 LTCITFLGDSSHIAVGSHTKELKIFDSNSSSPLESCTSHQAPVTLVQSHLSGETQLLLSS 1571
+TC+ F ++ H+A GS L I+ S T H+ VT V SG LL+S
Sbjct: 22 VTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH---LLAS 78
Query: 1572 SSQD--VHLWNASSIAGGPM----HSFEGCKAARFSNSGNLFAALPTETSDRGILLYDIQ 1625
S+D V +W ++ G H+ ++ F + G L L T + D+ + ++
Sbjct: 79 GSRDKTVRIW-VPNVKGESTVFRAHTAT-VRSVHFCSDGQL---LVTASDDKTVKVWSTH 133
Query: 1626 TYQLEAKLSDTSVNLTGRGHAYS---QIHFSPSDTMLLWNGILWDRRNSVPVHRFDQFTD 1682
+ L+ +N R +S ++ S SD + LWD+ + VH + +
Sbjct: 134 RQRFLFSLTQ-HINWV-RCAKFSPDGRLIVSASDDKTVK---LWDKTSRECVH---SYCE 185
Query: 1683 HGGG----GFHPAGNEVII----NS-EVWDLRKFRLLR--SVPSLDQTTITFNARGDVI 1730
HGG FHP+G + N+ +VWD R RL++ + S ++F+ G+ +
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYL 244
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1922 1615 0.00083 125 3 11 22 0.42 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 627 (67 KB)
Total size of DFA: 605 KB (2270 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 134.99u 0.16s 135.15t Elapsed: 00:00:12
Total cpu time: 135.00u 0.16s 135.16t Elapsed: 00:00:12
Start: Fri May 10 06:41:04 2013 End: Fri May 10 06:41:16 2013