Citrus Sinensis ID: 000181

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880------1890

MKMGLRDRTTSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTSEEARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

ccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc

cccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHEHccccccHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHcHHHEHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHccccHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHccccccHcHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHccccHcHHHHHHcccHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHcHccccHHHHHHHccccHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccEEccHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc

mkmglrdrttsmedpdgtLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAfsavgshsqAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGgcippllgllksssaEGQIAAAKTIYAVSqggakdyvgskifstegVVPVLWEQLKnglksgnvvDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARReiagsngipaminatiapskefmQGEYAQALQENAMCALANISGGLSNVISSLGqslescsspaQVADTLGALASALMIYdskaestkpsdplivEQTLVnqfkprlpflVQERTIEALASLygnpllsikLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLsnenddskwaitaaggipplVQILEsgsakakeDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLtsdlpeskVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLvvlagspvleVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLEsasgsvatsEALDALAILSrsggasghvkpAWQVlaefpksitpivssiadatplLQDKAIEILSRLCrdqpavlgdevtgasgcISSIARRVIsctnpkvkiGGAALLICAAKVNHQRIVEdlnhsnscapLIQSLVTMLSVveasplrnqgnddkeAISIYRYTseearnggesesstaVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQftqmdykedSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLlgcadadvQDLLDLSEefalvrypdqvALERLFRVEDIRVGATSRKAIPALVDllkpipdrpgapflALGFLIQLAkdcpsnkivMVEAGALEALTKYLslgpqdatEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILssncsmelKGDAAELCgvlfgntriRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLgkdrpscklemVKAGVIESVLDILHEAPDFLCSAFAELLRILTNnagiakgpsaakvVEPLFLLLtrsefgpdgqhSALQVLVNILEhpqcradysltshqaiepliplldspapAVQQLAAELLSHLLLEeqlqkdpvtqqvIGPLIRVLGSGIHILQQRAVKALVSIALTwpneiakeggvTELSKIILqadpslphaLWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVlesddgtsaEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNgkireskatksailplsqylldPQTQAQQARLLATLALGdlfqneglarsADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLigssdpetSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

mkmglrdrttsmedpdgTLASVAQCIEQLRqssssvqekEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARReiagsngipaMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSstkeetqakSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEAsplrnqgnddkeaISIYRYTseearnggesESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRvedirvgatsrkaipaLVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVleeqpteemKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

MKMGLRDRTTSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVllggcippllgllKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVIsslgqslescssPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGRegiqllisllglsseqqqeCSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTSEEARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVansgaagglisllgcaDADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVqqlaaellshllleeqlqKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPqtqaqqarllatlalGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

******************************************LRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLG*********************************GIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSL************VADTLGALASALMIYD***********LIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILE***********SILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKI***************LAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVE****************IY*****************AVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLE*************GAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVL*

*****************TLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLK**NVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLES****VATSEALDALAILSRSG******K**WQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTSEEARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPD*PGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAK*PSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIG******SVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

**************PDGTLASVAQCIEQL***********YSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSL***********QVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILE**********ASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSST*********SALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTS***********STAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

*************DPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESASGSVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTSEEARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNHTIQEYASSETVRAITGKITLALCSILLTVLI

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1890	2.2.26 [Sep-21-2011]
Q9SNC6		660	U-box domain-containing p	no	no	0.076	0.219	0.321	2e-09
O22193		826	U-box domain-containing p	no	no	0.069	0.158	0.4	2e-09
Q8GUG9		612	U-box domain-containing p	no	no	0.120	0.372	0.295	1e-07
Q9C9A6		628	U-box domain-containing p	no	no	0.117	0.355	0.300	1e-07
Q9ZV31		654	U-box domain-containing p	no	no	0.077	0.223	0.309	3e-07
Q8GWV5		760	U-box domain-containing p	no	no	0.091	0.226	0.307	5e-07
Q5VRH9		611	U-box domain-containing p	no	no	0.071	0.220	0.324	5e-07
Q5XEZ8		707	U-box domain-containing p	no	no	0.038	0.103	0.405	6e-07
Q0IMG9		694	E3 ubiquitin-protein liga	no	no	0.057	0.157	0.372	3e-06
A2ZLU6		694	Protein spotted leaf 11 O	N/A	no	0.057	0.157	0.372	3e-06

>sp\|Q9SNC6\|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1	Back alignment and function desciption

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 48/193 (24%)

Query: 415 LLVGLITMATNEVQEELVRALLKLC---NNEGSLWRALQGREGIQLLISLLGLSSEQQQE 471
           LLVGL++   + +QE  V ALL L    NN+G++  A      I  ++ +L   S + +E
Sbjct: 398 LLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSA----GAIPGIVQVLKKGSMEARE 453

Query: 472 CSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLC----NHSE 527
            + A L  LS   D++K  I A G IPPLV +L  G+ + K+D+A+ L NLC    N  +
Sbjct: 454 NAAATLFSLSV-IDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGK 512

Query: 528 DIRACV------------------------------------ESADAVPALLWLLKNGSA 551
            IRA V                                     S+DAVP+L+  ++ GS 
Sbjct: 513 AIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSP 572

Query: 552 NGKEIAAKTLNHL 564
             +E AA  L HL
Sbjct: 573 RNRENAAAVLVHL 585

Functions as an E3 ubiquitin ligase.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp\|O22193\|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	Back alignment and function description

>sp\|Q8GUG9\|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2	Back alignment and function description

>sp\|Q9C9A6\|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1	Back alignment and function description

>sp\|Q9ZV31\|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1	Back alignment and function description

>sp\|Q8GWV5\|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	Back alignment and function description

>sp\|Q5VRH9\|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1	Back alignment and function description

>sp\|Q5XEZ8\|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1	Back alignment and function description

>sp\|Q0IMG9\|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2	Back alignment and function description

>sp\|A2ZLU6\|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1890
224083759		2143	predicted protein [Populus trichocarpa]	0.992	0.874	0.884	0.0
255576178		2098	ubiquitin-protein ligase, putative [Rici	0.985	0.887	0.891	0.0
224096231		2116	predicted protein [Populus trichocarpa]	0.973	0.869	0.878	0.0
449451471		2130	PREDICTED: uncharacterized protein LOC10	0.991	0.879	0.862	0.0
449496450		2124	PREDICTED: uncharacterized protein LOC10	0.991	0.882	0.862	0.0
359480838		2179	PREDICTED: uncharacterized protein LOC10	0.992	0.860	0.867	0.0
356538029		2240	PREDICTED: uncharacterized protein LOC10	0.991	0.836	0.860	0.0
356569261		2164	PREDICTED: uncharacterized protein LOC10	0.991	0.865	0.860	0.0
356528503		2151	PREDICTED: uncharacterized protein LOC10	0.992	0.871	0.845	0.0
356511119		2151	PREDICTED: uncharacterized protein LOC10	0.992	0.871	0.846	0.0

>gi\|224083759\|ref\|XP_002307113.1\| predicted protein [Populus trichocarpa] gi\|222856562\|gb\|EEE94109.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 3295 bits (8544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1661/1878 (88%), Positives = 1758/1878 (93%), Gaps = 3/1878 (0%)

Query: 1    MKMGLRDRTTSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAV 60
            MKMG+RDRT SMEDPDGTLASVAQCIEQLR+SSSSVQEKEY+LRQL EL++TRENAFSAV
Sbjct: 42   MKMGVRDRTGSMEDPDGTLASVAQCIEQLRRSSSSVQEKEYALRQLRELVETRENAFSAV 101

Query: 61   GSHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSA 120
            GSHSQAVPVLVSLLRSGSL VKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSS 
Sbjct: 102  GSHSQAVPVLVSLLRSGSLGVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSE 161

Query: 121  EGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRN 180
            EGQIAAAKTIYAVSQGGAKD+VGSKIFSTEGVVPVLWE L+NGLK+G +VDNLLTGAL+N
Sbjct: 162  EGQIAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWELLRNGLKTGKLVDNLLTGALKN 221

Query: 181  LSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADAT 240
            LS+STEGFW+AT+QAGG+DILVKLLT GQS TQA++CFLLACMM ED S+CS+VLAA+AT
Sbjct: 222  LSSSTEGFWSATIQAGGVDILVKLLTTGQSDTQANICFLLACMMMEDESICSKVLAAEAT 281

Query: 241  KQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQG 300
            KQLLKLLG GNEASVRAEAAGALKSLS  CKDAR+EIA SNGIPA+INATIAPSKEFMQG
Sbjct: 282  KQLLKLLGPGNEASVRAEAAGALKSLSAQCKDARQEIAKSNGIPALINATIAPSKEFMQG 341

Query: 301  EYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAE 360
            EYAQALQE+AMCALANISGGLS VISSLGQSLESCSSPAQ ADTLGALASALMIYDSKAE
Sbjct: 342  EYAQALQEHAMCALANISGGLSFVISSLGQSLESCSSPAQTADTLGALASALMIYDSKAE 401

Query: 361  STKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLI 420
            ST+ SDP+++EQTLVNQF P LP+LVQERTIEALASLYGN +LS+KL NSEAKRLLVGLI
Sbjct: 402  STRASDPVVIEQTLVNQFNPHLPYLVQERTIEALASLYGNAILSVKLANSEAKRLLVGLI 461

Query: 421  TMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLL 480
            TMATNEVQ+ELVRALL LCNNEGSLWR+LQGREG+QLLISLLGLSSEQQQEC+VALLCLL
Sbjct: 462  TMATNEVQDELVRALLALCNNEGSLWRSLQGREGVQLLISLLGLSSEQQQECAVALLCLL 521

Query: 481  SNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVP 540
            SNEND+SKWAITAAGGIPPLVQILE+GSAKAKEDSA+ILRNLCNHSEDIRACVESADAVP
Sbjct: 522  SNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILRNLCNHSEDIRACVESADAVP 581

Query: 541  ALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLS 600
            ALLWLLKNGS NGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDAL+SMLS
Sbjct: 582  ALLWLLKNGSLNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLS 641

Query: 601  VVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTL 660
            VV  SD+LREGSAANDA+ETMIKILSSTKEETQAKSASALAGIFETRKDLRESSI+VKTL
Sbjct: 642  VVHLSDVLREGSAANDAIETMIKILSSTKEETQAKSASALAGIFETRKDLRESSISVKTL 701

Query: 661  WSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQ 720
            WSVMKLL+V SE IL E+S CLA+IFLS++ENR+VAAVARDALSPL+ LA S  LEVAEQ
Sbjct: 702  WSVMKLLNVESENILAESSHCLASIFLSIKENRDVAAVARDALSPLIALANSSTLEVAEQ 761

Query: 721  ATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTIT 780
            ATCALANLILD EVS+KAI  EII+PATRVL EGTISGKT AAAAIARLLHSR+ID +IT
Sbjct: 762  ATCALANLILDGEVSKKAIPNEIIVPATRVLREGTISGKTHAAAAIARLLHSRRIDNSIT 821

Query: 781  DCVNRAGTVLALVSFLESASG-SVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSI 839
            DCVN AGTVLALVSFLESA G S ATSEAL ALAILSRS GASGH+KPAW VLAEFP  I
Sbjct: 822  DCVNHAGTVLALVSFLESAIGRSAATSEALAALAILSRSEGASGHIKPAWAVLAEFPNHI 881

Query: 840  TPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVK 899
            +PIVSSIADATPLLQDKAIEILSRLCRDQP VLG+ V  ASGCI S+ARR I  T+PKVK
Sbjct: 882  SPIVSSIADATPLLQDKAIEILSRLCRDQPFVLGNAVASASGCIPSVARRAIDSTSPKVK 941

Query: 900  IGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISI 959
            IGGAALLICAAKV+HQR+VEDLN SNSC  LIQSLVTML   + SP  N  +DD+E ISI
Sbjct: 942  IGGAALLICAAKVSHQRVVEDLNQSNSCNHLIQSLVTMLCSADTSPSGNLVDDDREVISI 1001

Query: 960  YRYTSEEARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISD 1019
            YR+  E     GES  +TAVI+  NLA+WLL VLACH EK KIVIMEAGA++VLT+RIS 
Sbjct: 1002 YRHAKE--GESGESHKATAVIYDYNLAVWLLSVLACHGEKSKIVIMEAGAVEVLTNRISS 1059

Query: 1020 SLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFA 1079
               Q++Q D+ EDSSIWICALLLAILFQDRDIIRAHATMK+IP LANLLKSEESANRYFA
Sbjct: 1060 CYLQYSQSDFSEDSSIWICALLLAILFQDRDIIRAHATMKSIPALANLLKSEESANRYFA 1119

Query: 1080 AQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVAL 1139
            AQA+ASLVCNGSRGTLLSVANSGAAGGLISLLGCAD D+ DLL+LSEEFALV YPDQVAL
Sbjct: 1120 AQAIASLVCNGSRGTLLSVANSGAAGGLISLLGCADGDISDLLELSEEFALVCYPDQVAL 1179

Query: 1140 ERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEA 1199
            ERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALG L QLAKDCP NK VMVE+
Sbjct: 1180 ERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLNQLAKDCPPNKTVMVES 1239

Query: 1200 GALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGAR 1259
            G LEALTKYLSLG QDATEEAATDLLGILFSSAEIRRHE+AF AVSQLVAVLR+GGR AR
Sbjct: 1240 GILEALTKYLSLGLQDATEEAATDLLGILFSSAEIRRHEAAFGAVSQLVAVLRMGGRAAR 1299

Query: 1260 YSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRAL 1319
            YSAAKALESLFSADHIRNA++ARQAVQPLVEILNTGLE+EQHAAIAALVRLLSENPSRAL
Sbjct: 1300 YSAAKALESLFSADHIRNADTARQAVQPLVEILNTGLEKEQHAAIAALVRLLSENPSRAL 1359

Query: 1320 AVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLV 1379
            A ADVEMNAVDVLCRILSSNCS  LKGDAAELCGVLFGNTRIRST+AAARCVEPLVSLLV
Sbjct: 1360 AFADVEMNAVDVLCRILSSNCSTGLKGDAAELCGVLFGNTRIRSTMAAARCVEPLVSLLV 1419

Query: 1380 TEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGK 1439
            TEFSPAQ+SVV ALDKLVDDEQLAELVAAHGAVIPLVGLLYG NYMLHEAISRALVKLGK
Sbjct: 1420 TEFSPAQYSVVCALDKLVDDEQLAELVAAHGAVIPLVGLLYGGNYMLHEAISRALVKLGK 1479

Query: 1440 DRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLF 1499
            DRP+CK+EMVKAGVIES+LDILHEAPDFLC+AFAELLRILTNNA IAKGPSAAKVV PLF
Sbjct: 1480 DRPACKMEMVKAGVIESILDILHEAPDFLCAAFAELLRILTNNASIAKGPSAAKVVGPLF 1539

Query: 1500 LLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAA 1559
            LLLTR EFGPDGQHSALQVLVNILEHPQCRADY+LTSHQ IEPLIPLLDS APAVQQLAA
Sbjct: 1540 LLLTRPEFGPDGQHSALQVLVNILEHPQCRADYNLTSHQTIEPLIPLLDSQAPAVQQLAA 1599

Query: 1560 ELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGG 1619
            ELLSHLL+EE LQKDPVTQQVIGPLIRVL SGIHILQQRAVKALVSIAL WPNEIAKEGG
Sbjct: 1600 ELLSHLLMEEHLQKDPVTQQVIGPLIRVLSSGIHILQQRAVKALVSIALIWPNEIAKEGG 1659

Query: 1620 VTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIG 1679
            V+ELSK+ILQADPSLPH LWESAASVL++ILQFSSEFYLEVPVAVLVRLLRSG E TV+G
Sbjct: 1660 VSELSKVILQADPSLPHVLWESAASVLANILQFSSEFYLEVPVAVLVRLLRSGLESTVVG 1719

Query: 1680 SLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKAT 1739
            +LNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNN KIRESKAT
Sbjct: 1720 ALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRESKAT 1779

Query: 1740 KSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPT 1799
            K+AILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARS DAVSACRALVNVLEEQPT
Sbjct: 1780 KTAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSTDAVSACRALVNVLEEQPT 1839

Query: 1800 EEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNH 1859
            EEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDP+TSVQAAMFVKLLFSNH
Sbjct: 1840 EEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAMFVKLLFSNH 1899

Query: 1860 TIQEYASSETVRAITGKI 1877
            TIQEYASSETVRAIT  I
Sbjct: 1900 TIQEYASSETVRAITAAI 1917

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255576178\|ref\|XP_002528983.1\| ubiquitin-protein ligase, putative [Ricinus communis] gi\|223531573\|gb\|EEF33402.1\| ubiquitin-protein ligase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224096231\|ref\|XP_002310584.1\| predicted protein [Populus trichocarpa] gi\|222853487\|gb\|EEE91034.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449451471\|ref\|XP_004143485.1\| PREDICTED: uncharacterized protein LOC101213526 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449496450\|ref\|XP_004160137.1\| PREDICTED: uncharacterized protein LOC101230042 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|359480838\|ref\|XP_002276798.2\| PREDICTED: uncharacterized protein LOC100264630 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356538029\|ref\|XP_003537507.1\| PREDICTED: uncharacterized protein LOC100816765 [Glycine max]	Back alignment and taxonomy information

>gi\|356569261\|ref\|XP_003552822.1\| PREDICTED: uncharacterized protein LOC100818900 [Glycine max]	Back alignment and taxonomy information

>gi\|356528503\|ref\|XP_003532842.1\| PREDICTED: uncharacterized protein LOC100794002 [Glycine max]	Back alignment and taxonomy information

>gi\|356511119\|ref\|XP_003524277.1\| PREDICTED: uncharacterized protein LOC100807370 [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1890
TAIR\|locus:2827868		2150	CSI1 "cellulose synthase-inter	0.987	0.867	0.771	0.0
TAIR\|locus:2204700		2136	AT1G77460 "AT1G77460" [Arabido	0.993	0.879	0.437	0.0
TAIR\|locus:2205866		2114	AT1G44120 [Arabidopsis thalian	0.983	0.878	0.367	2.60000020455e-317
TAIR\|locus:2013990		628	AT1G71020 [Arabidopsis thalian	0.133	0.401	0.305	2.1e-11
UNIPROTKB\|E1C8F9		876	E1C8F9 "Uncharacterized protei	0.171	0.369	0.261	2e-06
MGI\|MGI:1918132		881	Armc3 "armadillo repeat contai	0.170	0.365	0.257	1.8e-05
TAIR\|locus:2017719		612	AT1G23030 [Arabidopsis thalian	0.124	0.383	0.290	7.5e-10
ASPGD\|ASPL0000008980		579	AN12408 [Emericella nidulans (	0.219	0.715	0.229	4.3e-09
TAIR\|locus:2082682		632	PUB14 "plant U-box 14" [Arabid	0.109	0.327	0.301	2.2e-08
TAIR\|locus:2045334		829	PUB4 "plant U-box 4" [Arabidop	0.202	0.460	0.219	6.9e-08

TAIR\|locus:2827868 CSI1 "cellulose synthase-interactive protein 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 7057 (2489.2 bits), Expect = 0., P = 0.
 Identities = 1454/1885 (77%), Positives = 1603/1885 (85%)

Query:     2 KMGLRDRTTSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVG 61
             KM LRDRTTSMEDPDGTLASVAQCIEQLRQ SSS QE+EY L+QLL+LI+ RENAFSAVG
Sbjct:    43 KMSLRDRTTSMEDPDGTLASVAQCIEQLRQGSSSAQEREYCLKQLLDLIEMRENAFSAVG 102

Query:    62 SHSQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVXXXXXXXXXXXXXKSSSAE 121
             SHSQAVPVLVSLLRSGS+ VKIQAATVLGSLCKENELRVKV             KSSS E
Sbjct:   103 SHSQAVPVLVSLLRSGSVGVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSVE 162

Query:   122 GQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNL 181
             GQIAAAKTIYAVS+GG KD+VGSKIFSTEGVVPVLW+QL++G K G V D LLTGAL+NL
Sbjct:   163 GQIAAAKTIYAVSEGGVKDHVGSKIFSTEGVVPVLWDQLRSGNKKGEV-DGLLTGALKNL 221

Query:   182 STSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATK 241
             S++TEGFW+ T++AGG+D+LVKLLT GQSST ++VCFLLACMM ED SVCS VL AD TK
Sbjct:   222 SSTTEGFWSETIRAGGVDVLVKLLTSGQSSTLSNVCFLLACMMMEDASVCSSVLTADITK 281

Query:   242 QLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGE 301
             QLLKLLGSGNEA VRAEAA ALKSLS   K+A+REIA SNGIP +INATIAPSKEFMQGE
Sbjct:   282 QLLKLLGSGNEAPVRAEAAAALKSLSAQSKEAKREIANSNGIPVLINATIAPSKEFMQGE 341

Query:   302 YAQALQENAMCALANISGGLSNVIXXXXXXXXXXXXPAQVADTLGALASALMIYDSKAES 361
             YAQALQENAMCALANISGGLS VI            PAQ ADTLGALASALMIYD KAE+
Sbjct:   342 YAQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQTADTLGALASALMIYDGKAET 401

Query:   362 TKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLIT 421
             T+ SDPL+VEQTL+ QFKPRLPFLVQERTIEALASLYGN +LS+KL NS+AKRLLVGLIT
Sbjct:   402 TRASDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNSILSVKLSNSDAKRLLVGLIT 461

Query:   422 MATNEVQEELVRALLKLCNNEGSLWRALQGRXXXXXXXXXXXXXXXXXXXCSVALLCLLS 481
             MA NEVQ+ELV+ALL LCN+EGSLW+ALQGR                   C+VALLCLLS
Sbjct:   462 MAVNEVQDELVKALLMLCNHEGSLWQALQGREGIQLLISLLGLSSEQQQECAVALLCLLS 521

Query:   482 NENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPA 541
             NEND+SKWAITAAGGIPPLVQILE+GSAKA+EDSA+ILRNLCNHSEDIRACVESADAVPA
Sbjct:   522 NENDESKWAITAAGGIPPLVQILETGSAKAREDSATILRNLCNHSEDIRACVESADAVPA 581

Query:   542 LLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSV 601
             LLWLLKNGS NGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESK+YVLDALKSMLSV
Sbjct:   582 LLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKIYVLDALKSMLSV 641

Query:   602 VSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLW 661
             V F+D+LREGSA+NDA+ETMIK++SS KEETQA SASALA IF++RKDLRES++A+KTL 
Sbjct:   642 VPFNDMLREGSASNDAIETMIKLMSSGKEETQANSASALAAIFQSRKDLRESALALKTLL 701

Query:   662 SVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQA 721
             S +KLL+V SE ILVE+ RCLAAI LS++ENR+VA  AR+AL  +V LA S VLEVAEQ 
Sbjct:   702 SAIKLLNVDSERILVESCRCLAAILLSIKENRDVAISAREALPTIVSLANSSVLEVAEQG 761

Query:   722 TCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITD 781
              CALANLILDSEVSEK I E+IIL ATR+L EGT+SGKTLAAAAIARLL  R+ID  +TD
Sbjct:   762 MCALANLILDSEVSEKVIVEDIILSATRILREGTVSGKTLAAAAIARLLSRRRIDSALTD 821

Query:   782 CVNRAGTVLALVSFLESASG-SVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSIT 840
              VNRAGTVL LVS LESA G S A SEALDALAI SRSG A+G+VKPAW VLAE P S+ 
Sbjct:   822 SVNRAGTVLTLVSLLESADGRSDAISEALDALAIFSRSG-ANGNVKPAWAVLAESPNSMA 880

Query:   841 PIVSSIAD-ATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVK 899
             PIVSSI   A P LQDKAIE+LSRLCRDQP VLG+ V  A  C+SSIA+RVI+  +PK+K
Sbjct:   881 PIVSSIVSVANPSLQDKAIEVLSRLCRDQPIVLGNMVNNARDCVSSIAKRVINTRDPKIK 940

Query:   900 IGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISI 959
             IGGAA++ICAAKV+ Q+++E+LN +  CA  +Q+LV +L  V+     +Q  D+K+ I I
Sbjct:   941 IGGAAIIICAAKVDDQKMIENLNETQLCAKFVQALVGILDSVQ-----DQEKDEKDKICI 995

Query:   960 YRYTSE-------EARNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDV 1012
               +  E       EA    E  +   VI G+NLAIWLL VL+CHDEK + VI+E+  +++
Sbjct:   996 CIHPKEKEEDEEEEATENREGSTGATVISGDNLAIWLLSVLSCHDEKSRAVILESEGIEL 1055

Query:  1013 LTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEE 1072
             +TDRI +   +F Q D  ED++IW+CALLLAILFQDR+I RAHATMKA+P+L+NL+KSEE
Sbjct:  1056 ITDRIGN---RFLQADNGEDANIWVCALLLAILFQDREITRAHATMKAVPVLSNLVKSEE 1112

Query:  1073 SANRYFAAQAVASLVCNGSRGTLLSVXXXXXXXXXXXXXXXXDADVQDLLDLSEEFALVR 1132
              A+RYFAAQA+ASLVCNGSRGTLLSV                D D+++LL LS+EF LVR
Sbjct:  1113 YADRYFAAQALASLVCNGSRGTLLSVANSGAAAGFISLLGCSDDDIKELLQLSQEFTLVR 1172

Query:  1133 YPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSN 1192
             YPDQVALERLFRVEDIRVGATSRKAIP LV+LLKPIPDRPGAP L+L  L QLA DCP N
Sbjct:  1173 YPDQVALERLFRVEDIRVGATSRKAIPLLVELLKPIPDRPGAPLLSLNLLTQLAGDCPQN 1232

Query:  1193 KIVMVEAGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLR 1252
              IVMVE+GALE L+KYLSLGPQD  EEAAT LLGILFSSAEIRRHESAF AVSQLVAVLR
Sbjct:  1233 MIVMVESGALEGLSKYLSLGPQDEQEEAATGLLGILFSSAEIRRHESAFGAVSQLVAVLR 1292

Query:  1253 LGGRGARYSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLS 1312
             LGGRGARYSAAKAL+SLF+ADHIRNAES+RQAVQPLVEILNTG EREQHAAIAALVRLLS
Sbjct:  1293 LGGRGARYSAAKALDSLFTADHIRNAESSRQAVQPLVEILNTGSEREQHAAIAALVRLLS 1352

Query:  1313 ENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVE 1372
             +NPSRALAVADVEMNAVDVLCRILSSN +MELKGDAAELC VLF NTRIRSTVAAARCVE
Sbjct:  1353 DNPSRALAVADVEMNAVDVLCRILSSNYTMELKGDAAELCYVLFANTRIRSTVAAARCVE 1412

Query:  1373 PLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISR 1432
             PLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAV+PLVGLLYG+NY+LHEAISR
Sbjct:  1413 PLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVVPLVGLLYGKNYVLHEAISR 1472

Query:  1433 ALVKLGKDRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAA 1492
             ALVKLGKDRP+CKLEMVKAGVI+ VLDILHEAPDFLC+AF+ELLRILTNNA IAKG SAA
Sbjct:  1473 ALVKLGKDRPACKLEMVKAGVIDCVLDILHEAPDFLCAAFSELLRILTNNATIAKGQSAA 1532

Query:  1493 KVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAP 1552
             KVVEPLF LLTR EFG DGQHSALQVLVNILEHPQCRADY+LT HQ IEPLIPLL+SP+P
Sbjct:  1533 KVVEPLFHLLTRLEFGADGQHSALQVLVNILEHPQCRADYTLTPHQVIEPLIPLLESPSP 1592

Query:  1553 AVXXXXXXXXXXXXXXXXXXKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPN 1612
             AV                  KDP+TQ  IGPLI VLGSGIH+LQQRAVKALVSIALTWPN
Sbjct:  1593 AVQQLAAELLSHLLYEEHLQKDPLTQLAIGPLIHVLGSGIHLLQQRAVKALVSIALTWPN 1652

Query:  1613 EIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSG 1672
             EIAKEGGV+ELSK+ILQADPSL + LWESAAS+L  ILQFSSEFYLEVPVAVLVRLLRS 
Sbjct:  1653 EIAKEGGVSELSKVILQADPSLSNVLWESAASILVIILQFSSEFYLEVPVAVLVRLLRSA 1712

Query:  1673 SEGTVIGSLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGK 1732
             SE TV+G+LNALLVLESDDGTSAE+MAESGAIEALL+LLRSHQCE+TAARLLEVLLNN K
Sbjct:  1713 SENTVVGALNALLVLESDDGTSAESMAESGAIEALLDLLRSHQCEDTAARLLEVLLNNVK 1772

Query:  1733 IRESKATKSAILPLSQYLLDPXXXXXXXXXXXXXXXGDLFQNEGLARSADAVSACRALVN 1792
             IR+SKATK+AILPLSQYLLDP               GDLFQNE LARS DA SACRALVN
Sbjct:  1773 IRDSKATKTAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARSTDAASACRALVN 1832

Query:  1793 VLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFV 1852
             VLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLI SSDPETSVQAAMFV
Sbjct:  1833 VLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLISSSDPETSVQAAMFV 1892

Query:  1853 KLLFSNHTIQEYASSETVRAITGKI 1877
             KLLFSNHT+QEYASSETVRAIT  I
Sbjct:  1893 KLLFSNHTVQEYASSETVRAITAAI 1917

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0030244 "cellulose biosynthetic process" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0051211 "anisotropic cell growth" evidence=IMP

TAIR\|locus:2204700 AT1G77460 "AT1G77460" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2205866 AT1G44120 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2013990 AT1G71020 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C8F9 E1C8F9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:1918132 Armc3 "armadillo repeat containing 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

TAIR\|locus:2017719 AT1G23030 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000008980 AN12408 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

TAIR\|locus:2082682 PUB14 "plant U-box 14" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2045334 PUB4 "plant U-box 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1890
PLN03200		2102	PLN03200, PLN03200, cellulose synthase-interactive	0.0
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	8e-10
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	2e-09
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	2e-07
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	1e-06
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	6e-06
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	1e-05
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	3e-05
PLN03200		2102	PLN03200, PLN03200, cellulose synthase-interactive	4e-05
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	7e-04
pfam00514		41	pfam00514, Arm, Armadillo/beta-catenin-like repeat	0.001
cd00020		120	cd00020, ARM, Armadillo/beta-catenin-like repeats	0.003
COG5064		526	COG5064, SRP1, Karyopherin (importin) alpha [Intra	0.003

>gnl\|CDD\|215629 PLN03200, PLN03200, cellulose synthase-interactive protein; Provisional	Back alignment and domain information

 Score = 3087 bits (8006), Expect = 0.0
 Identities = 1274/1878 (67%), Positives = 1503/1878 (80%), Gaps = 19/1878 (1%)

Query: 8    RTTSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAV 67
            RT+ M+DPDGTLASVAQCIEQLR  SSS QEKE +  +LLEL  TRE A  A+GSHSQA+
Sbjct: 1    RTSEMDDPDGTLASVAQCIEQLRAKSSSPQEKELTTARLLELAKTREEARKAIGSHSQAM 60

Query: 68   PVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAA 127
            P+LVSLLRSG+L  K+ AA VLG LCKE +LRVKVLLGGCIPPLL LLKS SAE Q AAA
Sbjct: 61   PLLVSLLRSGTLGAKVNAAAVLGVLCKEEDLRVKVLLGGCIPPLLSLLKSGSAEAQKAAA 120

Query: 128  KTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEG 187
            + IYAVS GG  D+VGSKIFSTEGVVP LW+QL+ G K   VV+ LLTGALRNL  ST+G
Sbjct: 121  EAIYAVSSGGLSDHVGSKIFSTEGVVPSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDG 180

Query: 188  FWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLL 247
            FW+AT++AGG+DILVKLL+ G S  QA+   LLA +M    S  S+VL A A KQLLKLL
Sbjct: 181  FWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISKVLDAGAVKQLLKLL 240

Query: 248  GSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQ 307
            G GNE SVRAEAAGAL++LS   K+A++ IA + GIPA+INAT+APSKEFMQGE+AQALQ
Sbjct: 241  GQGNEVSVRAEAAGALEALSSQSKEAKQAIADAGGIPALINATVAPSKEFMQGEFAQALQ 300

Query: 308  ENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDP 367
            ENAM ALANI GG+S +I  LG+  ES  SPA +ADTLGALA ALM++DS AEST+  DP
Sbjct: 301  ENAMGALANICGGMSALILYLGELSESPRSPAPIADTLGALAYALMVFDSSAESTRAFDP 360

Query: 368  LIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEV 427
             ++EQ LV   KPR   LVQER IEALASLYGN  LS KL ++EAK++LVGLITMAT +V
Sbjct: 361  TVIEQILVKLLKPRDTKLVQERIIEALASLYGNAYLSRKLNHAEAKKVLVGLITMATADV 420

Query: 428  QEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDS 487
            QEEL+RAL  LC  +G LW AL GREG+QLLISLLGLSSEQQQE +VALL +L++E D+S
Sbjct: 421  QEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDEVDES 480

Query: 488  KWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLK 547
            KWAITAAGGIPPLVQ+LE+GS KAKEDSA++L NLC HSEDIRACVESA AVPALLWLLK
Sbjct: 481  KWAITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVESAGAVPALLWLLK 540

Query: 548  NGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDI 607
            NG   G+EIAAKTL  L+  +D ATISQLTALL  DLPESKV+VLD L  +LSV S  D+
Sbjct: 541  NGGPKGQEIAAKTLTKLVRTADAATISQLTALLLGDLPESKVHVLDVLGHVLSVASLEDL 600

Query: 608  LREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLL 667
            +REGSAANDA+ T+I++LSS+KEETQ K+AS LA IF +R+DL ES    + +   +KLL
Sbjct: 601  VREGSAANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQDLCESLATDEIINPCIKLL 660

Query: 668  DVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALAN 727
               +E +  +++R LAA+  S++ENR+V+  A DA+ PL+ LA S  +EVAEQA CALAN
Sbjct: 661  TNNTEAVATQSARALAALSRSIKENRKVSYAAEDAIKPLIKLAKSSSIEVAEQAVCALAN 720

Query: 728  LILDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAG 787
            L+ D EV+ +A+AE+IILP TRVL EGT+ GK  AA A+A+LL    +D  + D V   G
Sbjct: 721  LLSDPEVAAEALAEDIILPLTRVLREGTLEGKRNAARALAQLLKHFPVDDVLKDSVQCRG 780

Query: 788  TVLALVSFLESASG-SVATSEALDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSI 846
            TVLALV  L S    S ATSEAL+ALA+L+R+ G +    P W VLAE P S+ P+V  +
Sbjct: 781  TVLALVDLLNSTDLDSSATSEALEALALLARTKGGANFSHPPWAVLAEVPSSLEPLVRCL 840

Query: 847  ADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIARRVISCTNPKVKIGGAALL 906
            A+  PL+QDKAIEILSRLCRDQP VLGD +  AS CISS+A R+I+ ++ +VKIGG ALL
Sbjct: 841  AEGHPLVQDKAIEILSRLCRDQPVVLGDLIANASKCISSLADRIINSSSLEVKIGGTALL 900

Query: 907  ICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGNDDKEAISIYRYTSEE 966
            ICAAK + Q ++E L+ S     LIQ+LV ML          + N  KE++SI   T   
Sbjct: 901  ICAAKEHRQLVMEALDESGYLKLLIQALVDML----------KQNSKKESLSIEIQTPRG 950

Query: 967  ARN------GGESES-STAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISD 1019
                     G + E    A I G  +A+WLL V+A HD K K+ IMEAG ++VLT++++ 
Sbjct: 951  FLESNLFADGDDFEVPDPATILGGTVALWLLSVIASHDAKSKLAIMEAGGIEVLTEKLAS 1010

Query: 1020 SLSQFTQMDYKEDSSIWICALLLAILFQDRDIIRAHATMKAIPILANLLKSEESANRYFA 1079
              S   Q ++++  SIWI ALLLAILFQDRD++RA ATM+AIP LANLLKSEE+ +RYFA
Sbjct: 1011 YTSN-RQAEFEDSESIWISALLLAILFQDRDVVRAPATMRAIPSLANLLKSEETIDRYFA 1069

Query: 1080 AQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEEFALVRYPDQVAL 1139
            AQA+ASLVCNGSRGTLL+VANSGA GGLISLLGCA++D+ +L+ LSEEF+LVR PDQVAL
Sbjct: 1070 AQALASLVCNGSRGTLLAVANSGAVGGLISLLGCAESDISNLVALSEEFSLVRNPDQVAL 1129

Query: 1140 ERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEA 1199
            ERLFRVEDIRVGAT+RKAIP LVDLLKPIPDRPGAP LALG L QLA+    NK+ M EA
Sbjct: 1130 ERLFRVEDIRVGATARKAIPLLVDLLKPIPDRPGAPPLALGLLTQLAEGSDVNKLAMAEA 1189

Query: 1200 GALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGAR 1259
            GAL+ALTKYLSLGPQD+TEEAA++LL ILFSS E+RRHESAF AV+QLVAVLRLG R AR
Sbjct: 1190 GALDALTKYLSLGPQDSTEEAASELLRILFSSPELRRHESAFGAVNQLVAVLRLGSRSAR 1249

Query: 1260 YSAAKALESLFSADHIRNAESARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRAL 1319
            YSAA+AL+ LFSA+HIR++E ARQAVQPLVE+LNTG E EQHAAI AL++L S NPS+AL
Sbjct: 1250 YSAARALQELFSAEHIRDSELARQAVQPLVEMLNTGSESEQHAAIGALIKLSSGNPSKAL 1309

Query: 1320 AVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAAARCVEPLVSLLV 1379
            A+ADVE NA++ LC+ILSS+ S+ELK DAAELC VLF NTRIRST AAARC+EPL+SLLV
Sbjct: 1310 AIADVEGNALENLCKILSSDSSLELKEDAAELCRVLFTNTRIRSTPAAARCIEPLISLLV 1369

Query: 1380 TEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGK 1439
            +E S AQ + V ALD+L+DDEQLAELVAAHGAV+PLVGL+ G NY+LHEA   AL+KLGK
Sbjct: 1370 SESSTAQEAGVCALDRLLDDEQLAELVAAHGAVVPLVGLVVGTNYVLHEAAISALIKLGK 1429

Query: 1440 DRPSCKLEMVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLF 1499
            DRP CKL+MVKAG+IE VLDIL EAPD LCSA AELLRILTNN+ IAKG SAAKVVEPLF
Sbjct: 1430 DRPPCKLDMVKAGIIERVLDILPEAPDSLCSAIAELLRILTNNSSIAKGQSAAKVVEPLF 1489

Query: 1500 LLLTRSEFGPDGQHSALQVLVNILEHPQCRADYSLTSHQAIEPLIPLLDSPAPAVQQLAA 1559
            LLLTR + G  GQHSALQ LVNILE PQC A  +LT  QAIEPLIPLL+SP+ AVQQLAA
Sbjct: 1490 LLLTRPDLGTWGQHSALQALVNILEKPQCLASLTLTPSQAIEPLIPLLESPSQAVQQLAA 1549

Query: 1560 ELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIALTWPNEIAKEGG 1619
            ELLSHLL EE  Q+D  TQ  + PL+R+ G GI  LQQRAVKAL SI+L+WP  +A  GG
Sbjct: 1550 ELLSHLLAEEHFQQDITTQNAVVPLVRLAGIGILSLQQRAVKALESISLSWPKAVADAGG 1609

Query: 1620 VTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIG 1679
            + ELSK+ILQADP  PHALWESAASVLS+IL+FSSE+Y EVPVAVLV+LLRS SE TV+ 
Sbjct: 1610 IFELSKVILQADPQPPHALWESAASVLSNILRFSSEYYFEVPVAVLVKLLRSTSESTVVV 1669

Query: 1680 SLNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKAT 1739
            +LNALLVLE DD +SAE MAESGAIEALLELLRSHQCEE AARLLE L NN K+RE KAT
Sbjct: 1670 ALNALLVLERDDSSSAEQMAESGAIEALLELLRSHQCEEAAARLLEALFNNVKVREMKAT 1729

Query: 1740 KSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSADAVSACRALVNVLEEQPT 1799
            K AI PLSQYLLDPQT++QQARLLA LALGDLFQ+EGLARS DAVSACRALV++LE+QPT
Sbjct: 1730 KYAIAPLSQYLLDPQTRSQQARLLAALALGDLFQHEGLARSTDAVSACRALVSLLEDQPT 1789

Query: 1800 EEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFVKLLFSNH 1859
            EEMK+VAICALQNLVM+SR+NKRAVAEAGGVQVV +L+ SS+P+TS QAA+ +KLLFSNH
Sbjct: 1790 EEMKMVAICALQNLVMHSRTNKRAVAEAGGVQVVQELLLSSNPDTSGQAALLIKLLFSNH 1849

Query: 1860 TIQEYASSETVRAITGKI 1877
            TIQEYASSE +RA+T  +
Sbjct: 1850 TIQEYASSELIRALTAAL 1867

Length = 2102

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|215629 PLN03200, PLN03200, cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|201276 pfam00514, Arm, Armadillo/beta-catenin-like repeat	Back alignment and domain information

>gnl\|CDD\|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats	Back alignment and domain information

>gnl\|CDD\|227396 COG5064, SRP1, Karyopherin (importin) alpha [Intracellular trafficking and secretion]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1890
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	100.0
PLN03200		2102	cellulose synthase-interactive protein; Provisiona	100.0
COG5064		526	SRP1 Karyopherin (importin) alpha [Intracellular t	100.0
KOG0166		514	consensus Karyopherin (importin) alpha [Intracellu	100.0
KOG4224		550	consensus Armadillo repeat protein VAC8 required f	99.98
KOG4224		550	consensus Armadillo repeat protein VAC8 required f	99.97
KOG0166		514	consensus Karyopherin (importin) alpha [Intracellu	99.97
KOG1824		1233	consensus TATA-binding protein-interacting protein	99.96
COG5064		526	SRP1 Karyopherin (importin) alpha [Intracellular t	99.95
PF05804		708	KAP: Kinesin-associated protein (KAP)	99.88
PF05804		708	KAP: Kinesin-associated protein (KAP)	99.88
KOG1048		717	consensus Neural adherens junction protein Plakoph	99.84
KOG1048		717	consensus Neural adherens junction protein Plakoph	99.75
KOG4199		461	consensus Uncharacterized conserved protein [Funct	99.74
KOG2122		2195	consensus Beta-catenin-binding protein APC, contai	99.7
KOG2122		2195	consensus Beta-catenin-binding protein APC, contai	99.66
KOG4500		604	consensus Rho/Rac GTPase guanine nucleotide exchan	99.66
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	99.64
KOG2171		1075	consensus Karyopherin (importin) beta 3 [Nuclear s	99.63
KOG4500		604	consensus Rho/Rac GTPase guanine nucleotide exchan	99.63
PRK09687		280	putative lyase; Provisional	99.6
PRK09687		280	putative lyase; Provisional	99.59
KOG4199		461	consensus Uncharacterized conserved protein [Funct	99.58
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	99.57
PRK13800		897	putative oxidoreductase/HEAT repeat-containing pro	99.51
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	99.43
KOG1293		678	consensus Proteins containing armadillo/beta-caten	99.42
KOG1222		791	consensus Kinesin associated protein KAP [Intracel	99.39
PF10508		503	Proteasom_PSMB: Proteasome non-ATPase 26S subunit;	99.37
KOG1824		1233	consensus TATA-binding protein-interacting protein	99.35
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	99.27
PF04826		254	Arm_2: Armadillo-like; InterPro: IPR006911 This en	99.27
KOG1293		678	consensus Proteins containing armadillo/beta-caten	99.26
KOG1222		791	consensus Kinesin associated protein KAP [Intracel	99.22
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	99.22
KOG1241		859	consensus Karyopherin (importin) beta 1 [Nuclear s	99.16
PF04826		254	Arm_2: Armadillo-like; InterPro: IPR006911 This en	99.13
PTZ00429		746	beta-adaptin; Provisional	99.05
PTZ00429		746	beta-adaptin; Provisional	99.05
KOG1241		859	consensus Karyopherin (importin) beta 1 [Nuclear s	99.04
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	99.03
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	99.03
KOG2023		885	consensus Nuclear transport receptor Karyopherin-b	98.99
cd00020		120	ARM Armadillo/beta-catenin-like repeats. An approx	98.99
TIGR02270		410	conserved hypothetical protein. Members are found	98.91
cd00256		429	VATPase_H VATPase_H, regulatory vacuolar ATP synth	98.89
TIGR02270		410	conserved hypothetical protein. Members are found	98.89
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	98.86
PRK14707		2710	hypothetical protein; Provisional	98.85
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	98.77
KOG0168		1051	consensus Putative ubiquitin fusion degradation pr	98.77
KOG0168		1051	consensus Putative ubiquitin fusion degradation pr	98.75
COG1413		335	FOG: HEAT repeat [Energy production and conversion	98.73
KOG1242		569	consensus Protein containing adaptin N-terminal re	98.71
COG1413		335	FOG: HEAT repeat [Energy production and conversion	98.7
COG5215		858	KAP95 Karyopherin (importin) beta [Intracellular t	98.69
KOG1789		2235	consensus Endocytosis protein RME-8, contains DnaJ	98.62
cd00256		429	VATPase_H VATPase_H, regulatory vacuolar ATP synth	98.62
KOG0213		1172	consensus Splicing factor 3b, subunit 1 [RNA proce	98.58
PRK14707		2710	hypothetical protein; Provisional	98.56
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	98.45
KOG1062		866	consensus Vesicle coat complex AP-1, gamma subunit	98.44
KOG0567		289	consensus HEAT repeat-containing protein [General	98.44
KOG2759		442	consensus Vacuolar H+-ATPase V1 sector, subunit H	98.4
KOG3678		832	consensus SARM protein (with sterile alpha and arm	98.39
KOG2160		342	consensus Armadillo/beta-catenin-like repeat-conta	98.39
KOG0213		1172	consensus Splicing factor 3b, subunit 1 [RNA proce	98.33
KOG1060		968	consensus Vesicle coat complex AP-3, beta subunit	98.32
PF03224		312	V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004	98.32
KOG2160		342	consensus Armadillo/beta-catenin-like repeat-conta	98.31
KOG0211		759	consensus Protein phosphatase 2A regulatory subuni	98.29
KOG1242		569	consensus Protein containing adaptin N-terminal re	98.23
KOG0567		289	consensus HEAT repeat-containing protein [General	98.22
KOG2759		442	consensus Vacuolar H+-ATPase V1 sector, subunit H	98.2
KOG1062		866	consensus Vesicle coat complex AP-1, gamma subunit	98.16
PF05536		543	Neurochondrin: Neurochondrin	98.12
KOG0212		675	consensus Uncharacterized conserved protein [Funct	98.1
KOG0211		759	consensus Protein phosphatase 2A regulatory subuni	98.1
KOG4413		524	consensus 26S proteasome regulatory complex, subun	98.06
KOG1060		968	consensus Vesicle coat complex AP-3, beta subunit	98.06
KOG4646		173	consensus Uncharacterized conserved protein, conta	98.01
KOG3678		832	consensus SARM protein (with sterile alpha and arm	98.0
KOG1059		877	consensus Vesicle coat complex AP-3, delta subunit	97.97
PF03224		312	V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004	97.97
KOG0212		675	consensus Uncharacterized conserved protein [Funct	97.96
KOG1059		877	consensus Vesicle coat complex AP-3, delta subunit	97.96
COG5181		975	HSH155 U2 snRNP spliceosome subunit [RNA processin	97.9
KOG1061		734	consensus Vesicle coat complex AP-1/AP-2/AP-4, bet	97.89
KOG4413		524	consensus 26S proteasome regulatory complex, subun	97.89
COG5240		898	SEC21 Vesicle coat complex COPI, gamma subunit [In	97.88
COG5181		975	HSH155 U2 snRNP spliceosome subunit [RNA processin	97.87
KOG2259		823	consensus Uncharacterized conserved protein [Funct	97.74
COG5240		898	SEC21 Vesicle coat complex COPI, gamma subunit [In	97.73
PF05536		543	Neurochondrin: Neurochondrin	97.73
KOG4646		173	consensus Uncharacterized conserved protein, conta	97.72
KOG1061		734	consensus Vesicle coat complex AP-1/AP-2/AP-4, bet	97.65
KOG1077		938	consensus Vesicle coat complex AP-2, alpha subunit	97.63
KOG2973		353	consensus Uncharacterized conserved protein [Funct	97.59
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	97.58
KOG1789		2235	consensus Endocytosis protein RME-8, contains DnaJ	97.54
PF13646		88	HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I	97.53
KOG4151		748	consensus Myosin assembly protein/sexual cycle pro	97.48
PF00514		41	Arm: Armadillo/beta-catenin-like repeat; InterPro:	97.48
KOG2259		823	consensus Uncharacterized conserved protein [Funct	97.43
PF14664		371	RICTOR_N: Rapamycin-insensitive companion of mTOR,	97.35
KOG1077		938	consensus Vesicle coat complex AP-2, alpha subunit	97.35
PF00514		41	Arm: Armadillo/beta-catenin-like repeat; InterPro:	97.28
KOG1943		1133	consensus Beta-tubulin folding cofactor D [Posttra	97.26
KOG2973		353	consensus Uncharacterized conserved protein [Funct	97.22
KOG1078		865	consensus Vesicle coat complex COPI, gamma subunit	97.11
PF14664		371	RICTOR_N: Rapamycin-insensitive companion of mTOR,	97.1
KOG2734		536	consensus Uncharacterized conserved protein [Funct	97.08
COG5369		743	Uncharacterized conserved protein [Function unknow	96.91
KOG1517		1387	consensus Guanine nucleotide binding protein MIP1	96.9
KOG1943		1133	consensus Beta-tubulin folding cofactor D [Posttra	96.9
COG5369		743	Uncharacterized conserved protein [Function unknow	96.86
KOG4535		728	consensus HEAT and armadillo repeat-containing pro	96.84
KOG1517		1387	consensus Guanine nucleotide binding protein MIP1	96.79
PF10165		446	Ric8: Guanine nucleotide exchange factor synembryn	96.77
PF10165		446	Ric8: Guanine nucleotide exchange factor synembryn	96.77
KOG1078		865	consensus Vesicle coat complex COPI, gamma subunit	96.71
KOG2062		929	consensus 26S proteasome regulatory complex, subun	96.66
KOG1058		948	consensus Vesicle coat complex COPI, beta subunit	96.62
KOG0915		1702	consensus Uncharacterized conserved protein [Funct	96.51
PF09759		102	Atx10homo_assoc: Spinocerebellar ataxia type 10 pr	96.49
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	96.17
smart00185		41	ARM Armadillo/beta-catenin-like repeats. Approx. 4	96.14
KOG0915		1702	consensus Uncharacterized conserved protein [Funct	96.14
KOG2734		536	consensus Uncharacterized conserved protein [Funct	96.08
PF12348		228	CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi	95.97
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	95.92
PF09759		102	Atx10homo_assoc: Spinocerebellar ataxia type 10 pr	95.86
COG5096		757	Vesicle coat complex, various subunits [Intracellu	95.86
PF13513		55	HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O	95.7
smart00185		41	ARM Armadillo/beta-catenin-like repeats. Approx. 4	95.65
KOG1058		948	consensus Vesicle coat complex COPI, beta subunit	95.39
PF12460		415	MMS19_C: RNAPII transcription regulator C-terminal	95.31
PF12460		415	MMS19_C: RNAPII transcription regulator C-terminal	95.28
COG5096		757	Vesicle coat complex, various subunits [Intracellu	95.26
PRK09169		2316	hypothetical protein; Validated	95.26
COG5231		432	VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene	94.98
KOG1240		1431	consensus Protein kinase containing WD40 repeats [	94.97
KOG4151		748	consensus Myosin assembly protein/sexual cycle pro	94.8
PF05004		309	IFRD: Interferon-related developmental regulator (	94.79
KOG4535		728	consensus HEAT and armadillo repeat-containing pro	94.79
KOG0414		1251	consensus Chromosome condensation complex Condensi	94.74
COG5231		432	VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene	94.32
KOG1240		1431	consensus Protein kinase containing WD40 repeats [	94.05
PF11841		160	DUF3361: Domain of unknown function (DUF3361)	93.93
PF05004		309	IFRD: Interferon-related developmental regulator (	93.76
KOG1788		2799	consensus Uncharacterized conserved protein [Funct	93.62
COG5116		926	RPN2 26S proteasome regulatory complex component [	93.42
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	93.11
KOG2062		929	consensus 26S proteasome regulatory complex, subun	93.07
PF12755		97	Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	92.96
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	92.7
KOG2025		892	consensus Chromosome condensation complex Condensi	91.8
PF08569		335	Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro	91.6
KOG2025		892	consensus Chromosome condensation complex Condensi	91.5
PF11841		160	DUF3361: Domain of unknown function (DUF3361)	91.28
PF05918		556	API5: Apoptosis inhibitory protein 5 (API5); Inter	90.88
PF05918		556	API5: Apoptosis inhibitory protein 5 (API5); Inter	90.82
PF12717		178	Cnd1: non-SMC mitotic condensation complex subunit	90.72
PF11698		119	V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011	90.6
PF11698		119	V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011	90.33
PF08045		257	CDC14: Cell division control protein 14, SIN compo	89.97
PF13764		802	E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4	89.89
PF08045		257	CDC14: Cell division control protein 14, SIN compo	89.75
PF07814		361	WAPL: Wings apart-like protein regulation of heter	89.47
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	89.39
KOG1967		1030	consensus DNA repair/transcription protein Mms19 [	88.77
KOG1820		815	consensus Microtubule-associated protein [Cytoskel	88.74
KOG1832		1516	consensus HIV-1 Vpr-binding protein [Cell cycle co	88.46
KOG2956		516	consensus CLIP-associating protein [General functi	88.23
PF02985		31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	88.15
KOG1832		1516	consensus HIV-1 Vpr-binding protein [Cell cycle co	87.8
KOG2032		533	consensus Uncharacterized conserved protein [Funct	87.25
PF13764		802	E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4	87.14
KOG1788		2799	consensus Uncharacterized conserved protein [Funct	87.03
PF04078		262	Rcd1: Cell differentiation family, Rcd1-like ; Int	86.93
KOG2274		1005	consensus Predicted importin 9 [Intracellular traf	86.91
PRK09169		2316	hypothetical protein; Validated	86.87
PF08569		335	Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro	86.83
KOG1991		1010	consensus Nuclear transport receptor RANBP7/RANBP8	86.8
KOG2032		533	consensus Uncharacterized conserved protein [Funct	86.55
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	86.5
COG5116		926	RPN2 26S proteasome regulatory complex component [	86.41
PF14225		262	MOR2-PAG1_C: Cell morphogenesis C-terminal	86.1
PF07814		361	WAPL: Wings apart-like protein regulation of heter	85.92
KOG4653		982	consensus Uncharacterized conserved protein [Funct	85.66
KOG2956		516	consensus CLIP-associating protein [General functi	85.46
KOG1967		1030	consensus DNA repair/transcription protein Mms19 [	85.45
PF12719		298	Cnd3: Nuclear condensing complex subunits, C-term	85.4
KOG3036		293	consensus Protein involved in cell differentiation	85.36
PF04063		192	DUF383: Domain of unknown function (DUF383); Inter	85.17
KOG3036		293	consensus Protein involved in cell differentiation	84.8
PF01347		618	Vitellogenin_N: Lipoprotein amino terminal region;	83.55
KOG1566		342	consensus Conserved protein Mo25 [Function unknown	82.87
PF11701		157	UNC45-central: Myosin-binding striated muscle asse	82.77
smart00638		574	LPD_N Lipoprotein N-terminal Domain.	82.58
PF11701		157	UNC45-central: Myosin-binding striated muscle asse	82.37
KOG2999		713	consensus Regulator of Rac1, required for phagocyt	80.92
KOG0414		1251	consensus Chromosome condensation complex Condensi	80.89
KOG4653		982	consensus Uncharacterized conserved protein [Funct	80.84
KOG1020		1692	consensus Sister chromatid cohesion protein SCC2/N	80.5

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

Probab=100.00  E-value=1.4e-223  Score=2210.26  Aligned_cols=1869  Identities=68%  Similarity=0.961  Sum_probs=1773.3

Q ss_pred             CCCCCChhhHHHHHHHHHHHHccCCChhHHHHHHHHHHHHHhchhhHhhhhhccCCchHHHHHHhhcCCHHHHHHHHHHH
Q 000181           10 TSMEDPDGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLAVKIQAATVL   89 (1890)
Q Consensus        10 ~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ke~A~~~L~~l~~~~~~~r~~i~~~~g~v~~Lv~lL~~~~~~~~~~aa~~L   89 (1890)
                      ..|+||+++..++..++++|.+.+++.++|+.|+..|..|++.++++|++|+.+.|++|.|+.+|+++++.+|.+++.+|
T Consensus         3 ~~~~~~~~~~~~v~~Lve~L~s~~ss~~~~~~Al~~Lr~Lak~~~enR~~Ia~~aGaIP~LV~lL~sg~~~vk~nAaaaL   82 (2102)
T PLN03200          3 SEMDDPDGTLASVAQCIEQLRAKSSSPQEKELTTARLLELAKTREEARKAIGSHSQAMPLLVSLLRSGTLGAKVNAAAVL   82 (2102)
T ss_pred             ccccCccchHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHhcChHHHHHHHHccCcHHHHHHHHcCCCHHHHHHHHHHH
Confidence            45999999999999999999998778899999999999999999999999998899999999999999999999999999


Q ss_pred             HHhhccchhhHHHHhcCChHHHHHhhcCCCHHHHHHHHHHHHHHhcCCCCCccccchhhhcCChHHHHHHHhccCCCCch
Q 000181           90 GSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNV  169 (1890)
Q Consensus        90 ~~L~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~ls~~~~~~~~~~~~~~~~g~ip~L~~ll~~~~~~~~~  169 (1890)
                      .++++.++++.+++..|+||+|+.+|++++.+.|+.|+++|++|+.+...++.+.++++.+|+||.|++++++++..+..
T Consensus        83 ~nLS~~e~nk~~Iv~~GaIppLV~LL~sGs~eaKe~AA~AL~sLS~~~~~D~~~~~I~v~~GaVp~Lv~lL~~gsk~d~~  162 (2102)
T PLN03200         83 GVLCKEEDLRVKVLLGGCIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDHVGSKIFSTEGVVPSLWDQLQPGNKQDKV  162 (2102)
T ss_pred             HHHhcCHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHHHHHHHHcCcchhhhhhhhhhhcCChHHHHHHHhCCchhhHH
Confidence            99999999999999999999999999999999999999999999995322555557788999999999999998776766


Q ss_pred             HHHHHHHHHHHhccCChhHHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHHHHhhcCchhhhHhhccchHHHHHHHHcC
Q 000181          170 VDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLKLLGS  249 (1890)
Q Consensus       170 v~~~~~~~L~~L~~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~  249 (1890)
                      ++..++.+|+|||..++++++.++++|+||.|+.+|+++++..+.+|+.+|.+++..+++.+..+++.|++|.|+++|++
T Consensus       163 L~~~Av~AL~nLs~~~en~~~~IIeaGaVp~LV~LLsS~d~~lQ~eAa~aLa~Lass~ee~~~aVIeaGaVP~LV~LL~s  242 (2102)
T PLN03200        163 VEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMMAFESSISKVLDAGAVKQLLKLLGQ  242 (2102)
T ss_pred             HHHHHHHHHHHHhcCccchHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcc
Confidence            88889999999999999999989999999999999999999999999999999998877789999999999999999988


Q ss_pred             CCCHhHHHHHHHHHHHhhhcCHHHHHHHHhcCChHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhhCCCchhhhhhh
Q 000181          250 GNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQALQENAMCALANISGGLSNVISSLG  329 (1890)
Q Consensus       250 ~~~~~~~~~Aa~aL~~Ls~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~~~~~l~e~a~~aL~nl~~~~~~~i~~l~  329 (1890)
                      +++..+|+.|+++|+||+.++++++..++++||+|.|+.++.+++++++++..+..++++|+++|.|+|++.+..+..++
T Consensus       243 g~~~~VRE~AA~AL~nLAs~s~e~r~~Iv~aGgIp~LI~lL~sp~~e~~~~~~~~~Lqe~AvwALsNIcgg~~~ll~~L~  322 (2102)
T PLN03200        243 GNEVSVRAEAAGALEALSSQSKEAKQAIADAGGIPALINATVAPSKEFMQGEFAQALQENAMGALANICGGMSALILYLG  322 (2102)
T ss_pred             CCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCcchhhhccccchHHHHHHHHHHHHHhCCchhhHHHHH
Confidence            76778999999999999999999999999999999999999999888888888899999999999999999999999999


Q ss_pred             ccccCCCChhhhhhhHhHHHHHHHHhcccccCCCCCChhhhHHHHHhhcCCCCChHHHHHHHHHHHHhhCCCccchhhhh
Q 000181          330 QSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLEN  409 (1890)
Q Consensus       330 ~~~~~~~~~~~~~~~~gal~~ll~~~~~~~~~~~~~~~~~i~~~L~~ll~~~~~~~~~~~a~~aL~~L~~~~~~~~~l~~  409 (1890)
                      +++++++...++.+..|+++|+++.++...+....+++..+.+.|++++++.++..+++++..+|+.++.|+.+++.+.+
T Consensus       323 ~ll~s~rd~~~~ada~gALayll~l~d~~~~~~~~i~~~~v~~~LV~Llr~k~p~~vqe~V~eALasl~gN~~l~~~L~~  402 (2102)
T PLN03200        323 ELSESPRSPAPIADTLGALAYALMVFDSSAESTRAFDPTVIEQILVKLLKPRDTKLVQERIIEALASLYGNAYLSRKLNH  402 (2102)
T ss_pred             HhhcccchHHHHHHHHhhHHHHHHhcCCchhhhhhccccccHHHHHHHhCCCCCchhHHHHHHHHHHhcCChHHHHHHHh
Confidence            99999988889999999999999998855444456777788899999999998887899999999999999999999999


Q ss_pred             cCcHHHHHHHhcCCCHHHHHHHHHHHHHhhccCchhhHHHHhcCcHHHHHHhhCCCCHHHHHHHHHHHHHcccCChhcHH
Q 000181          410 SEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQQECSVALLCLLSNENDDSKW  489 (1890)
Q Consensus       410 ~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~  489 (1890)
                      .++++.||.++...+.++|..++++|+++|.++.+.++.|.+.|++|.|+++|++++..+|+.|+++|+|++.++++++.
T Consensus       403 ~daik~LV~LL~~~~~evQ~~Av~aL~~L~~~~~e~~~aIi~~ggIp~LV~LL~s~s~~iQ~~A~~~L~nLa~~ndenr~  482 (2102)
T PLN03200        403 AEAKKVLVGLITMATADVQEELIRALSSLCCGKGGLWEALGGREGVQLLISLLGLSSEQQQEYAVALLAILTDEVDESKW  482 (2102)
T ss_pred             ccchhhhhhhhccCCHHHHHHHHHHHHHHhCCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence            99999999999999999999999999999999889999999999999999999999999999999999999988889999


Q ss_pred             HHHhcCCcHHHHHhccCCCHHHHHHHHHHHHHHhcCChHHHHHHHhCCCHHHHHHHhhcCChhHHHHHHHHHHHHhcCCC
Q 000181          490 AITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSD  569 (1890)
Q Consensus       490 ~i~~~g~i~~Lv~lL~~~~~~~~e~a~~aL~~L~~~~~~~r~~i~~~g~i~~Lv~ll~~~~~~~~~~Aa~aL~~L~~~~~  569 (1890)
                      .++++|+||+|+++|.+++.++|+.|+|+|+|++.+++++|..+.+.|++|+|+++|+++++++++.|+++|.||..+.+
T Consensus       483 aIieaGaIP~LV~LL~s~~~~iqeeAawAL~NLa~~~~qir~iV~~aGAIppLV~LL~sgd~~~q~~Aa~AL~nLi~~~d  562 (2102)
T PLN03200        483 AITAAGGIPPLVQLLETGSQKAKEDSATVLWNLCCHSEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKLVRTAD  562 (2102)
T ss_pred             HHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence            99999999999999999999999999999999999877888888899999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHhcCCcchHHHHHHHHHHHhhhcCchHHHHHhhhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhhcChh
Q 000181          570 TATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASALAGIFETRKD  649 (1890)
Q Consensus       570 ~~~i~~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~~~~~~~i~~Lv~lL~s~~~~~~~~A~~aL~~L~~~~~~  649 (1890)
                      ...+++++.++.++++..+.+++++++++.......+..+.++...+|++.|+++++++++.+++.|+|+|.+++.++++
T Consensus       563 ~~~I~~Lv~LLlsdd~~~~~~aL~vLgnIlsl~~~~d~~~~g~~~~ggL~~Lv~LL~sgs~~ikk~Aa~iLsnL~a~~~d  642 (2102)
T PLN03200        563 AATISQLTALLLGDLPESKVHVLDVLGHVLSVASLEDLVREGSAANDALRTLIQLLSSSKEETQEKAASVLADIFSSRQD  642 (2102)
T ss_pred             hhHHHHHHHHhcCCChhHHHHHHHHHHHHHhhcchhHHHHHhhhccccHHHHHHHHcCCCHHHHHHHHHHHHHHhcCChH
Confidence            99999999999999999999999999999888877776666666789999999999999999999999999999999999


Q ss_pred             HHHHHHHcCchHHHHHhhcCCCHHHHHHHHHHHHHHHccCchhhHHHHHhCCChHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 000181          650 LRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVARDALSPLVVLAGSPVLEVAEQATCALANLI  729 (1890)
Q Consensus       650 ~~~~~~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~~~~~~~~v~~Lv~ll~~~~~ev~~~aa~aL~nL~  729 (1890)
                      +++.++..|+||||+.+|++++.+++++++++|.+++.+..+.++..+++.|++++|+++|++++.++++.|+.+|.||+
T Consensus       643 ~~~avv~agaIpPLV~LLss~~~~v~keAA~AL~nL~~~~~~~q~~~~v~~GaV~pL~~LL~~~d~~v~e~Al~ALanLl  722 (2102)
T PLN03200        643 LCESLATDEIINPCIKLLTNNTEAVATQSARALAALSRSIKENRKVSYAAEDAIKPLIKLAKSSSIEVAEQAVCALANLL  722 (2102)
T ss_pred             HHHHHHHcCCHHHHHHHHhcCChHHHHHHHHHHHHHHhCCCHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998776677777899999999999999999999999999999999


Q ss_pred             cCchHHHHHHhcCcHHHHHHHHhcCCcchHHHHHHHHHHHhhcCccchhHhhhhhhhccHHHHHHHhhccC-cccchHHH
Q 000181          730 LDSEVSEKAIAEEIILPATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESAS-GSVATSEA  808 (1890)
Q Consensus       730 ~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~~~aa~aL~~L~~~~~~~~~~~~~~~~~g~l~~li~~l~~~~-~~v~~~~a  808 (1890)
                      .+++.+.++...+++++|++++++++++.|++|+|+|.+|.+.++.++.+.+|++++|++.+|+++|+..| +.+...++
T Consensus       723 ~~~e~~~ei~~~~~I~~Lv~lLr~G~~~~k~~Aa~AL~~L~~~~~~~~~~~~~~~~~g~v~~l~~~L~~~~~~~~~~~~a  802 (2102)
T PLN03200        723 SDPEVAAEALAEDIILPLTRVLREGTLEGKRNAARALAQLLKHFPVDDVLKDSVQCRGTVLALVDLLNSTDLDSSATSEA  802 (2102)
T ss_pred             cCchHHHHHHhcCcHHHHHHHHHhCChHHHHHHHHHHHHHHhCCChhHHHHHHHHHhCcHHHHHHHHhcCCcchhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999 44554689


Q ss_pred             HHHHHHHHhcCCCCCCCCCccceeecCCCChhhHHhHhhcCChhHHHHHHHHHHHHhcCCccchhhhhccCccchHHHHH
Q 000181          809 LDALAILSRSGGASGHVKPAWQVLAEFPKSITPIVSSIADATPLLQDKAIEILSRLCRDQPAVLGDEVTGASGCISSIAR  888 (1890)
Q Consensus       809 l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~g~~i~~~~~~~~~~~~  888 (1890)
                      +++|.++++.+++.++.+|+|..++|.|++++||++|+++++|.+|++|+++|+|||+|||..+|++|..+.+|+.++++
T Consensus       803 l~~l~~l~~~~~~~~~~~~~~~~~~e~p~~l~~l~~~l~~~~p~~~~kai~il~~~~~~~~~~~~~~~~~~~~~~~~~~~  882 (2102)
T PLN03200        803 LEALALLARTKGGANFSHPPWAVLAEVPSSLEPLVRCLAEGHPLVQDKAIEILSRLCRDQPVVLGDLIANASKCISSLAD  882 (2102)
T ss_pred             HHHHHHHHhhcccCCCCCCchhhHHhccCchHHHHHHHHcCChHHHHHHHHHHHHHhccChhHHHHHHhcccchHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCceeecchhHHHHHhhhchhhHHHhhhccccchhhHHHHHHHHHhhcCCCCcCCCC-ChhHHHHHhhhhhhcc
Q 000181          889 RVISCTNPKVKIGGAALLICAAKVNHQRIVEDLNHSNSCAPLIQSLVTMLSVVEASPLRNQGN-DDKEAISIYRYTSEEA  967 (1890)
Q Consensus       889 ~~l~s~~~~~r~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~Lv~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~  967 (1890)
                      |+++|+++++|+||+..+||+||.|++.+++.++++++....|+.||+|+++++..  .+ -+ ....--.+... ....
T Consensus       883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~-~~~~  958 (2102)
T PLN03200        883 RIINSSSLEVKIGGTALLICAAKEHRQLVMEALDESGYLKLLIQALVDMLKQNSKK--ES-LSIEIQTPRGFLES-NLFA  958 (2102)
T ss_pred             HHhhcCCceEEecchhhhhhhhhhhHHHHHHHHHhhccHHHHHHHHHHHHhccCcc--cc-cceeecCCccchhh-hhhc
Confidence            99999999999999999999999999999999999999999999999999987644  11 11 00000001100 0011


Q ss_pred             cCCCCCCCCcccccCchhHHHHHHHHhccCCccchhhhhccchhhhhhhhhhccccccccccccCchhHHHHHHHHHHhc
Q 000181          968 RNGGESESSTAVIFGENLAIWLLCVLACHDEKCKIVIMEAGAMDVLTDRISDSLSQFTQMDYKEDSSIWICALLLAILFQ 1047 (1890)
Q Consensus       968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 1047 (1890)
                      +...|..+.|..+.+.+++.|++++..+++.+||+++||+|++|++++++++|.+. +|++++|++++|||++++|+|||
T Consensus       959 ~~~~~~~~~~~~~~~~~~a~~ll~~~~~~~~~~k~~~~e~~~~~~~~~~~~~~~~~-~q~~~~d~~~~~~~~~ll~~lf~ 1037 (2102)
T PLN03200        959 DGDDFEVPDPATILGGTVALWLLSVIASHDAKSKLAIMEAGGIEVLTEKLASYTSN-RQAEFEDSESIWISALLLAILFQ 1037 (2102)
T ss_pred             cCCcccCCCCCccCcchHHHHHHHHHHcCCccchhhhhhcccHHHHHHHHHhhccC-ccccccccHHHHHHHHHHHHHcC
Confidence            23457778899999999999999999999999999999999999999999999665 99999999999999999999999


Q ss_pred             chhhhhhhhhhchHHHHHHhhcchhHHhHHhHHHHHHHHHhcCCCcchhhhccccchhhhHHhhcccccchhhHHhhhHh
Q 000181         1048 DRDIIRAHATMKAIPILANLLKSEESANRYFAAQAVASLVCNGSRGTLLSVANSGAAGGLISLLGCADADVQDLLDLSEE 1127 (1890)
Q Consensus      1048 d~~v~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1127 (1890)
                      |++|+++|++|++||.|+.+++++|.+|||||||++++++|+|+|++..++||+|+.+|+|.|+|+.++|..+++.|+||
T Consensus      1038 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~a~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~e 1117 (2102)
T PLN03200       1038 DRDVVRAPATMRAIPSLANLLKSEETIDRYFAAQALASLVCNGSRGTLLAVANSGAVGGLISLLGCAESDISNLVALSEE 1117 (2102)
T ss_pred             ChhhhcCHhHHHHhHHHHhhhhhHHHHHHHHHHHHHHHHHHcCCcchhhhhhcccccchhhhhhhhhhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCcHHHHHhhhhhcccccCccccccHHHHHHhcCCCCCCCCchHHHHHHHHHHhhcCccchhHHHhcCcHHHHHH
Q 000181         1128 FALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLIQLAKDCPSNKIVMVEAGALEALTK 1207 (1890)
Q Consensus      1128 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~~A~~~L~~la~~~~~~r~~i~eag~l~~Lv~ 1207 (1890)
                      |+++++|++.+++.||++++++.+.+.++.||.||++|++.+++.+++..|+..|+.++++++.||.+|+++|+++.|++
T Consensus      1118 ~~l~~~~~~~~le~lf~~~~ir~~~~a~~~Ip~Lv~lL~~~~~r~~~~~~AL~kLr~LA~EserNR~~maeaGAle~L~k 1197 (2102)
T PLN03200       1118 FSLVRNPDQVALERLFRVEDIRVGATARKAIPLLVDLLKPIPDRPGAPPLALGLLTQLAEGSDVNKLAMAEAGALDALTK 1197 (2102)
T ss_pred             hhccccHHHHHHHHHhhhhhhcchHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHH
Confidence            99999999999999999999999999999999999999999998999999999999999999999999999999999999


Q ss_pred             HHhcCCcchhHHHHHHHHHHhhcCHHHHHhhhhcCcHHHHHHHHhcCChhHHHHHHHHHHHhhccchhhhhhhhcCChHH
Q 000181         1208 YLSLGPQDATEEAATDLLGILFSSAEIRRHESAFAAVSQLVAVLRLGGRGARYSAAKALESLFSADHIRNAESARQAVQP 1287 (1890)
Q Consensus      1208 ~L~~~~~~~q~~a~~~ll~~l~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~r~~Aa~aL~~L~~~~~~r~~i~~~~~i~~ 1287 (1890)
                      +++..+.+....+++.++++++.|++.+......+++++|+.+|+.|+...|++|+.+|.+++..+++|..+...|+|||
T Consensus      1198 vLSl~~s~s~e~a~~ElL~IL~~~~e~~~~l~a~~~v~~Lv~vL~~Gs~~aR~~Aa~aL~~L~~~~~~~~~~~a~~ai~p 1277 (2102)
T PLN03200       1198 YLSLGPQDSTEEAASELLRILFSSPELRRHESAFGAVNQLVAVLRLGSRSARYSAARALQELFSAEHIRDSELARQAVQP 1277 (2102)
T ss_pred             HHHhcCccchhHHHHHHHHHHhCCHHHHHHhhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhhhhhhhhhhhccchH
Confidence            99998766678889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCChHHHHHHHHHHHHHhccCchhhHHHHhhhCChHHHHHHHHhhcCChhhHHHHHHHHHHhhCChhhHHHHHh
Q 000181         1288 LVEILNTGLEREQHAAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCGVLFGNTRIRSTVAA 1367 (1890)
Q Consensus      1288 Lv~lL~~~~~~~~~~A~~aL~~L~~~~~~~~~~~~~v~~g~v~~L~~lL~~~~~~~~~~~a~~~l~~L~~~~~~~~~~~~ 1367 (1890)
                      |+.+|..+....+..+..+|.++..++.+++..+.+|++++++.++++|++.++.++++.+..+|..+|+++.++.+..+
T Consensus      1278 Lv~ll~~~~~~~~~~a~~ALvkL~kd~is~~a~~~~~~~a~L~~l~~iL~~~~~~~l~~~l~~Lc~~l~~~~~~R~~~v~ 1357 (2102)
T PLN03200       1278 LVEMLNTGSESEQHAAIGALIKLSSGNPSKALAIADVEGNALENLCKILSSDSSLELKEDAAELCRVLFTNTRIRSTPAA 1357 (2102)
T ss_pred             HHHHhcccchhhhHHHHHHHHHHHcCCCChHhHhhcccchhHHHHHHhcccccchhHHHHHHHHhHHhcCChHHHhhHHH
Confidence            99999999999999999999999999988888887789999999999999887889999999999999999999999999


Q ss_pred             hCchHHHHHHHccCChHHHHHHHHHHHhccCCchHHHHHHHcCChHHHHHhhcCCcHhHHHHHHHHHHHhccCChhhHHH
Q 000181         1368 ARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYGRNYMLHEAISRALVKLGKDRPSCKLE 1447 (1890)
Q Consensus      1368 ~~~i~~Lv~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~gav~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~ 1447 (1890)
                      .|++++||.+|.++.+.+.+.++.+|..|++.++.++.+..++++-|++..+-..+....+.|+++|++++.++|.++.+
T Consensus      1358 agaV~~LIeLL~de~~~~~E~Al~vLd~Lc~~eegre~~~~h~a~vplV~~ilrvS~~a~E~AV~aL~kl~~~~~~v~~E 1437 (2102)
T PLN03200       1358 ARCIEPLISLLVSESSTAQEAGVCALDRLLDDEQLAELVAAHGAVVPLVGLVVGTNYVLHEAAISALIKLGKDRPPCKLD 1437 (2102)
T ss_pred             hCCHHHHHHHHhccCchHHHHHHHHHHHHhcCHhhHHHHHHcCChhhHHHHHHcCCHHHHHHHHHHHHHHhCCChHHHHH
Confidence            99999999999997777799999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHcCcHHHHHHHhccCChhHHHHHHHHHHHHHhcccccCCccccCChHHHHHHhhccCCChhhHHHHHHHHHHhhcCCC
Q 000181         1448 MVKAGVIESVLDILHEAPDFLCSAFAELLRILTNNAGIAKGPSAAKVVEPLFLLLTRSEFGPDGQHSALQVLVNILEHPQ 1527 (1890)
Q Consensus      1448 l~~~~~i~~L~~lL~~~~~~v~~~aa~~l~~L~~~~~~~~~~~~~~~v~~Li~lL~~~~~~~~v~~~al~aL~nl~~~~~ 1527 (1890)
                      +++.|+++.++-+|..-++..+..++++|+.|.+++.+.+.+...++++||+-.|.+++.+.+.|++|+++|.|+.+.|+
T Consensus      1438 mv~~G~~~kllllLQ~c~~~lkekAaeLLrlL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~al~~l~~i~e~~~ 1517 (2102)
T PLN03200       1438 MVKAGIIERVLDILPEAPDSLCSAIAELLRILTNNSSIAKGQSAAKVVEPLFLLLTRPDLGTWGQHSALQALVNILEKPQ 1517 (2102)
T ss_pred             HHHhCHHHHHHHHHHcCCHHHHHHHHHHHHHhccchhhccccchhhhhHHHHHHHhccCcceecHHHHHHHHHHHHhCcc
Confidence            99999999999999997788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCchhhhhhccCCCCHHHHHHHHHHHHHhhcccccccchhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHh
Q 000181         1528 CRADYSLTSHQAIEPLIPLLDSPAPAVQQLAAELLSHLLLEEQLQKDPVTQQVIGPLIRVLGSGIHILQQRAVKALVSIA 1607 (1890)
Q Consensus      1528 ~~~~~~~~~~~~i~~Lv~lL~s~~~~vq~~A~~aL~~l~~~~~~~~~l~~~~~i~~Lv~lL~s~~~~v~~~A~~aL~~l~ 1607 (1890)
                      +.........++|.+|+.+|+|+++.+|+.|+++|+.+..++.+|+++.+.++|+||+++|+++.+..|+.|+++|.|++
T Consensus      1518 ~~~~~~~~~~~~i~~Li~lL~s~~~~vqe~aa~ll~~l~~~~~~~~~~~~~~aI~pLv~~l~~~~~~~~~~A~~aL~~~~ 1597 (2102)
T PLN03200       1518 CLASLTLTPSQAIEPLIPLLESPSQAVQQLAAELLSHLLAEEHFQQDITTQNAVVPLVRLAGIGILSLQQRAVKALESIS 1597 (2102)
T ss_pred             hhhhhhcCccchHHHHHHHHcCCcHHHHHHHHHHHHHHhcchHHhhhhhcccchHHHHHHhcCCChhHHHHHHHHHHHhh
Confidence            99998889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccChhHHHhhcChHHHHHHHhhcCCCCcHHHHHHHHHHHHhhhhhchhhhcccchHHHHHhhccCChhHHHHHHHHHHHh
Q 000181         1608 LTWPNEIAKEGGVTELSKIILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGSLNALLVL 1687 (1890)
Q Consensus      1608 ~~~~~~l~~~g~I~~Ll~~l~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~Lv~ll~~~~~~v~~~a~~aL~~L 1687 (1890)
                      +.||+.+.++|||.+|+|+|.+.||+.++.+|+.|+.+|+|+.+++++++...+++.|++++++.++.++..|..+|..+
T Consensus      1598 ~~w~~~v~~~ggv~~l~~~~~~~d~~~~~~l~~~a~~vl~n~~~~~~~~~~~v~~~~lvkl~~s~~e~~~~~a~~~l~~~ 1677 (2102)
T PLN03200       1598 LSWPKAVADAGGIFELSKVILQADPQPPHALWESAASVLSNILRFSSEYYFEVPVAVLVKLLRSTSESTVVVALNALLVL 1677 (2102)
T ss_pred             cccHHHHHHccCHHHHHHHHHccCCCCchhhHHHHHHHHHHHhccCceeEEEeeHHHHHHHHhccchhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999977777999999999999999999999999999


Q ss_pred             hcCChhhHHHHHHcccHHHHHHHHccCCcHHHHHHHHHHHhhchhhhhhhhccccccccccccCChHHHHHHHHHHHHHh
Q 000181         1688 ESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNGKIRESKATKSAILPLSQYLLDPQTQAQQARLLATLA 1767 (1890)
Q Consensus      1688 ~~~~~~~~~~i~~~g~i~~Li~lL~~~~~~~~a~~al~~L~~~~~~r~~i~~~~~i~~L~~~~~~~~~~~~~~~~la~l~ 1767 (1890)
                      +.+|++.++.|+++|+|+.|+++|++|+|+|.+++.|+.|.|+.++|+..++|.+|.||.+|+.||+++.|+++.+++++
T Consensus      1678 ~~~d~~~~~~~~~~g~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1757 (2102)
T PLN03200       1678 ERDDSSSAEQMAESGAIEALLELLRSHQCEEAAARLLEALFNNVKVREMKATKYAIAPLSQYLLDPQTRSQQARLLAALA 1757 (2102)
T ss_pred             HhcchhHHHHHHHhhhHHHHHHHHHhccchhHHHHHHHHHhcCcchhhhhhHHHhcCcHHHHhcCcccccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhhhhcccccchHHHHHHhhccCCCHHHHHHHHHHHHHhhcCCchhHHHHHhcCcHHHHHHHhCCCCCCchHH
Q 000181         1768 LGDLFQNEGLARSADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQ 1847 (1890)
Q Consensus      1768 ~~~~~~~~~l~~~~~~~~~~~~Lv~lL~~~~~~~~r~~A~~aL~~l~~~~~~~~~~~~~~g~v~~L~~ll~~~~~~~~~~ 1847 (1890)
                      +|+.+++||+.+.++..++|+.||++|+++|++|++++|+|||+|++++++++++.++|+|||..+|+|+.|+|+++..+
T Consensus      1758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1837 (2102)
T PLN03200       1758 LGDLFQHEGLARSTDAVSACRALVSLLEDQPTEEMKMVAICALQNLVMHSRTNKRAVAEAGGVQVVQELLLSSNPDTSGQ 1837 (2102)
T ss_pred             hccchhhhhhhhccCcHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHhccchHHHHHHccchhHHHHHHcCCCccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccchhhHhhhHHHHHHHHHHHHHHHHH
Q 000181         1848 AAMFVKLLFSNHTIQEYASSETVRAITGKITLALCS 1883 (1890)
Q Consensus      1848 a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1883 (1890)
                      |+.++++||+|||++||+|||+||+||+++|.-+.+
T Consensus      1838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1873 (2102)
T PLN03200       1838 AALLIKLLFSNHTIQEYASSELIRALTAALEKDLWS 1873 (2102)
T ss_pred             HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999987654

>PLN03200 cellulose synthase-interactive protein; Provisional	Back alignment and domain information

>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only]	Back alignment and domain information

>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion]	Back alignment and domain information

>PF05804 KAP: Kinesin-associated protein (KAP)	Back alignment and domain information

>PF05804 KAP: Kinesin-associated protein (KAP)	Back alignment and domain information

>KOG1048 consensus Neural adherens junction protein Plakophilin and related Armadillo repeat proteins [Signal transduction mechanisms; Extracellular structures]	Back alignment and domain information

>KOG1048 consensus Neural adherens junction protein Plakophilin and related Armadillo repeat proteins [Signal transduction mechanisms; Extracellular structures]	Back alignment and domain information

>KOG4199 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2122 consensus Beta-catenin-binding protein APC, contains ARM repeats [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>KOG2122 consensus Beta-catenin-binding protein APC, contains ARM repeats [Signal transduction mechanisms; Cytoskeleton]	Back alignment and domain information

>KOG4500 consensus Rho/Rac GTPase guanine nucleotide exchange factor smgGDS/Vimar [Signal transduction mechanisms]	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4500 consensus Rho/Rac GTPase guanine nucleotide exchange factor smgGDS/Vimar [Signal transduction mechanisms]	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>PRK09687 putative lyase; Provisional	Back alignment and domain information

>KOG4199 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only]	Back alignment and domain information

>KOG1222 consensus Kinesin associated protein KAP [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells	Back alignment and domain information

>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only]	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function	Back alignment and domain information

>KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only]	Back alignment and domain information

>KOG1222 consensus Kinesin associated protein KAP [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd00020 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments	Back alignment and domain information

>TIGR02270 conserved hypothetical protein	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

>PRK14707 hypothetical protein; Provisional	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0168 consensus Putative ubiquitin fusion degradation protein [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0168 consensus Putative ubiquitin fusion degradation protein [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG1413 FOG: HEAT repeat [Energy production and conversion]	Back alignment and domain information

>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion]	Back alignment and domain information

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments	Back alignment and domain information

>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification]	Back alignment and domain information

>PRK14707 hypothetical protein; Provisional	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0567 consensus HEAT repeat-containing protein [General function prediction only]	Back alignment and domain information

>KOG2759 consensus Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]	Back alignment and domain information

>KOG3678 consensus SARM protein (with sterile alpha and armadillo motifs) [Extracellular structures]	Back alignment and domain information

>KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification]	Back alignment and domain information

>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0567 consensus HEAT repeat-containing protein [General function prediction only]	Back alignment and domain information

>KOG2759 consensus Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]	Back alignment and domain information

>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF05536 Neurochondrin: Neurochondrin	Back alignment and domain information

>KOG0212 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG4413 consensus 26S proteasome regulatory complex, subunit PSMD5 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4646 consensus Uncharacterized conserved protein, contains ARM repeats [Function unknown]	Back alignment and domain information

>KOG3678 consensus SARM protein (with sterile alpha and armadillo motifs) [Extracellular structures]	Back alignment and domain information

>KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>KOG0212 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

>KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4413 consensus 26S proteasome regulatory complex, subunit PSMD5 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]	Back alignment and domain information

>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification]	Back alignment and domain information

>KOG2259 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]	Back alignment and domain information

>PF05536 Neurochondrin: Neurochondrin	Back alignment and domain information

>KOG4646 consensus Uncharacterized conserved protein, contains ARM repeats [Function unknown]	Back alignment and domain information

>KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2973 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A	Back alignment and domain information

>KOG4151 consensus Myosin assembly protein/sexual cycle protein and related proteins [Posttranslational modification, protein turnover, chaperones; Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless	Back alignment and domain information

>KOG2259 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term	Back alignment and domain information

>KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless	Back alignment and domain information

>KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG2973 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term	Back alignment and domain information

>KOG2734 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG5369 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG5369 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only]	Back alignment and domain information

>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway []	Back alignment and domain information

>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway []	Back alignment and domain information

>KOG1078 consensus Vesicle coat complex COPI, gamma subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0915 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>smart00185 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>KOG0915 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2734 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B	Back alignment and domain information

>smart00185 ARM Armadillo/beta-catenin-like repeats	Back alignment and domain information

>KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins	Back alignment and domain information

>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins	Back alignment and domain information

>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]	Back alignment and domain information

>PRK09169 hypothetical protein; Validated	Back alignment and domain information

>COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]	Back alignment and domain information

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]	Back alignment and domain information

>KOG4151 consensus Myosin assembly protein/sexual cycle protein and related proteins [Posttranslational modification, protein turnover, chaperones; Cell cycle control, cell division, chromosome partitioning; General function prediction only]	Back alignment and domain information

>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []	Back alignment and domain information

>KOG4535 consensus HEAT and armadillo repeat-containing protein [General function prediction only]	Back alignment and domain information

>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]	Back alignment and domain information

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]	Back alignment and domain information

>PF11841 DUF3361: Domain of unknown function (DUF3361)	Back alignment and domain information

>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 []	Back alignment and domain information

>KOG1788 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>KOG2062 consensus 26S proteasome regulatory complex, subunit RPN2/PSMD1 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis	Back alignment and domain information

>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF11841 DUF3361: Domain of unknown function (DUF3361)	Back alignment and domain information

>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms	Back alignment and domain information

>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms	Back alignment and domain information

>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1	Back alignment and domain information

>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane	Back alignment and domain information

>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1	Back alignment and domain information

>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4	Back alignment and domain information

>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1	Back alignment and domain information

>PF07814 WAPL: Wings apart-like protein regulation of heterochromatin; InterPro: IPR022771 This entry contains sequences expressed in eukaryotic organisms (metazoa, fungi, plants) bearing high similarity to the WAPL conserved region of D	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription]	Back alignment and domain information

>KOG1820 consensus Microtubule-associated protein [Cytoskeleton]	Back alignment and domain information

>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2956 consensus CLIP-associating protein [General function prediction only]	Back alignment and domain information

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []	Back alignment and domain information

>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG2032 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4	Back alignment and domain information

>KOG1788 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms []	Back alignment and domain information

>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure]	Back alignment and domain information

>PRK09169 hypothetical protein; Validated	Back alignment and domain information

>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis	Back alignment and domain information

>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG2032 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF14225 MOR2-PAG1_C: Cell morphogenesis C-terminal	Back alignment and domain information

>PF07814 WAPL: Wings apart-like protein regulation of heterochromatin; InterPro: IPR022771 This entry contains sequences expressed in eukaryotic organisms (metazoa, fungi, plants) bearing high similarity to the WAPL conserved region of D	Back alignment and domain information

>KOG4653 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG2956 consensus CLIP-associating protein [General function prediction only]	Back alignment and domain information

>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription]	Back alignment and domain information

>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain	Back alignment and domain information

>KOG3036 consensus Protein involved in cell differentiation/sexual development [General function prediction only]	Back alignment and domain information

>PF04063 DUF383: Domain of unknown function (DUF383); InterPro: IPR007205 This is a protein of unknown function	Back alignment and domain information

>KOG3036 consensus Protein involved in cell differentiation/sexual development [General function prediction only]	Back alignment and domain information

>PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 []	Back alignment and domain information

>KOG1566 consensus Conserved protein Mo25 [Function unknown]	Back alignment and domain information

>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle	Back alignment and domain information

>smart00638 LPD_N Lipoprotein N-terminal Domain	Back alignment and domain information

>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle	Back alignment and domain information

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]	Back alignment and domain information

>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG4653 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1890
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	2e-65
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	9e-33
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	3e-20
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	1e-19
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	2e-18
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	3e-13
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	5e-10
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	3e-52
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	2e-42
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	5e-42
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	4e-36
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	8e-36
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	1e-33
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	2e-31
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	2e-27
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	2e-27
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	4e-27
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	5e-22
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	3e-19
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	4e-08
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	3e-52
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	1e-51
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	2e-44
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	2e-44
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	1e-36
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	7e-36
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	1e-33
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	7e-28
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	1e-25
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	9e-24
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	4e-09
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	3e-51
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	7e-51
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	1e-45
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	2e-43
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	5e-40
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	1e-39
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	4e-35
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	3e-28
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	6e-28
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	6e-25
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	2e-32
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	1e-29
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	2e-25
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	2e-23
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	1e-22
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	2e-21
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	3e-21
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	9e-19
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	1e-18
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	7e-17
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	4e-14
3oqs_A		510	Importin subunit alpha-2; importin alpha, karyophe	7e-10
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	9e-30
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	2e-25
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	5e-17
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	6e-15
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	4e-14
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	4e-13
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	2e-12
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	1e-11
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	1e-10
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	6e-06
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	8e-06
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	9e-30
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	9e-26
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	3e-17
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	1e-16
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	6e-14
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	9e-13
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	1e-05
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	8e-05
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	2e-28
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	3e-23
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	9e-23
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	1e-21
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	2e-21
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	2e-17
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-16
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	9e-16
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	9e-15
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	1e-14
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-14
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-14
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	3e-13
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-13
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	4e-11
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-09
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	2e-08
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	5e-06
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	5e-28
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	3e-27
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	4e-23
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	2e-21
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	2e-20
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	3e-20
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	8e-19
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	1e-17
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	3e-15
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	3e-12
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	1e-11
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	6e-10
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	2e-09
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	3e-27
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	2e-26
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	3e-26
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	1e-21
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	1e-20
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	2e-20
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	5e-19
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	4e-18
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	2e-17
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	3e-15
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	4e-15
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	8e-11
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	3e-08
3nmz_A		458	APC variant protein; protein-protein complex, arma	9e-26
3nmz_A		458	APC variant protein; protein-protein complex, arma	1e-22
3nmz_A		458	APC variant protein; protein-protein complex, arma	2e-21
3nmz_A		458	APC variant protein; protein-protein complex, arma	5e-18
3nmz_A		458	APC variant protein; protein-protein complex, arma	1e-16
3nmz_A		458	APC variant protein; protein-protein complex, arma	3e-16
3nmz_A		458	APC variant protein; protein-protein complex, arma	3e-15
3nmz_A		458	APC variant protein; protein-protein complex, arma	9e-14
3nmz_A		458	APC variant protein; protein-protein complex, arma	4e-12
3nmz_A		458	APC variant protein; protein-protein complex, arma	5e-12
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-24
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-22
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-22
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-22
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	9e-20
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	2e-19
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	2e-19
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-17
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	2e-13
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	7e-13
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	8e-13
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	4e-10
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	9e-06
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	3e-04
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	1e-21
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	1e-14
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	4e-12
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	1e-11
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	2e-09
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	3e-08
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	4e-08
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	1e-07
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	2e-07
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	6e-07
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	4e-06
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	5e-06
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	4e-05
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	5e-21
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	5e-21
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	2e-17
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	5e-15
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	3e-12
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	1e-11
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	3e-11
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	9e-11
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	1e-10
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	6e-10
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	6e-10
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	7e-09
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	3e-08
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	4e-08
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	8e-05
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	1e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-21
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-19
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1u6g_C		1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	2e-13
1u6g_C		1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	9e-06
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	3e-13
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	5e-13
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-12
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-10
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	5e-10
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	5e-08
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	2e-07
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-06
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-05
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-05
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-04
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	1e-04
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	5e-04
3opb_A		778	SWI5-dependent HO expression protein 4; heat and a	2e-12
3opb_A		778	SWI5-dependent HO expression protein 4; heat and a	3e-06
3grl_A		651	General vesicular transport factor P115; vesicle t	7e-07
1b3u_A		588	Protein (protein phosphatase PP2A); scaffold prote	1e-04
1te4_A		131	Conserved protein MTH187; methanobacterium thermoa	8e-04

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

 Score =  238 bits (608), Expect = 2e-65
 Identities = 122/791 (15%), Positives = 250/791 (31%), Gaps = 55/791 (6%)

Query: 18  TLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSG 77
           T   V Q ++     ++ + ++  +   L+ L   +E   + +      +  + SL +  
Sbjct: 4   TSTKVKQMMDLTFDLATPIDKRRAAANNLVVL--AKEQTGAELLYKDHCIAKVASLTKVE 61

Query: 78  S-LAVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQIAAA-----KTIY 131
               + +    ++ +LC+ +  R K +L     P    +     E  ++ A       + 
Sbjct: 62  KDQDIYVNMVHLVAALCENSVERTKGVLTELGVPWFMRVLDQKHENCVSTAQFCLQTILN 121

Query: 132 AVSQGGAKDYVGSKIFSTE-------GVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTS 184
           A+S    K                   ++  L   + +   SG   D ++    RN+  +
Sbjct: 122 ALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVIELITRNVHYT 181

Query: 185 TEGFWAATVQAGGIDILVKLLTLGQ-----------SSTQAHVCFLLACMMEEDVSVCSR 233
              +    V+  G+  L+ + +  +            S+       LA + E      ++
Sbjct: 182 ALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAK 241

Query: 234 VLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAP 293
               D   + +K      +   +     A+ +L +   D   ++    GI  MI A    
Sbjct: 242 ARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATT 301

Query: 294 SKEFMQGEYAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALM 353
             E  Q    + L   A  +  + +  L      + + L    +       L  L     
Sbjct: 302 DDELQQRVACECL--IAASSKKDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGS 359

Query: 354 IYDSKAESTKPSD---PLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKL-EN 409
                A      D     + E       KP     ++    + LA L  +     KL E+
Sbjct: 360 YGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIED 419

Query: 410 SEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLSSEQQ 469
             +   L+ L           +V   + LCN         + +E +  +I L   + +  
Sbjct: 420 KASIHALMDLARGGNQSCLYGVVTTFVNLCNAY-------EKQEMLPEMIELAKFAKQHI 472

Query: 470 QECSVALLCLLSNENDDSKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDI 529
            E          N+       +   G    L  + ++ S  ++E  A +L  +C   +++
Sbjct: 473 PEEHELDDVDFINKR---ITVLANEGITTALCALAKTESHNSQELIARVLNAVC-GLKEL 528

Query: 530 RACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSD----------TATISQLTAL 579
           R  V     V ALL +   G+  GK  A + L  +    +             I  L  L
Sbjct: 529 RGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNL 588

Query: 580 LTSDLPESKVYVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSSTKEETQAKSASA 639
           L  D   + +   ++L ++ ++ S ++ +R+       V  +   L          +A  
Sbjct: 589 LQQD--CTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQC 646

Query: 640 LAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIFLSVRENREVAAVA 699
           L  +  +   ++        +  +  L +   E      +  LA I     +  E     
Sbjct: 647 LCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAI 706

Query: 700 RDALSPLVVLAGSPVLEVAEQATCALANLILDSEVSEKAIAEEIILPATRVLCEGTISGK 759
              L  L  L  +P   V  +    + N+I   E   K + E  I+     L +     +
Sbjct: 707 ASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTR 766

Query: 760 TLAAAAIARLL 770
             A     + L
Sbjct: 767 AKAREVATQCL 777

PyMOL of 3now

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230	Back alignment and structure

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233	Back alignment and structure

>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778	Back alignment and structure

>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778	Back alignment and structure

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Length = 651	Back alignment and structure

>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588	Back alignment and structure

>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Length = 131	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1890
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	100.0
3now_A		810	UNC-45 protein, SD10334P; armadillo repeat, HSP90,	100.0
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	100.0
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	100.0
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	100.0
2z6g_A		780	B-catenin; FULL-length, beta-catenin, cell adhesio	100.0
1jdh_A		529	Beta-catenin; beta-catenin, protein-protein comple	100.0
2z6h_A		644	Catenin beta-1, beta-catenin; C-terminal domain, a	100.0
3ul1_B		510	Importin subunit alpha-2; arm repeat, armadillo re	100.0
3tpo_A		529	Importin subunit alpha-2; nuclear import, protein	100.0
3ul1_B		510	Importin subunit alpha-2; arm repeat, armadillo re	100.0
3tpo_A		529	Importin subunit alpha-2; nuclear import, protein	100.0
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	100.0
3l6x_A		584	Catenin delta-1; catenin, armadillo, ARM, JMD, CE	100.0
4b8j_A		528	Importin subunit alpha-1A; transport protein, nucl	100.0
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	100.0
4b8j_A		528	Importin subunit alpha-1A; transport protein, nucl	100.0
3nmz_A		458	APC variant protein; protein-protein complex, arma	99.98
3nmz_A		458	APC variant protein; protein-protein complex, arma	99.98
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	99.97
1wa5_B		530	Importin alpha subunit; nuclear transport/complex,	99.97
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	99.97
1xm9_A		457	Plakophilin 1; armadillo repeat, cell adhesion; 2.	99.97
2jdq_A		450	Importin alpha-1 subunit; transport, PB2 subunit,	99.97
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	99.94
3nmw_A		354	APC variant protein; ARMADIILO repeats domain, cel	99.94
3opb_A		778	SWI5-dependent HO expression protein 4; heat and a	99.93
3opb_A		778	SWI5-dependent HO expression protein 4; heat and a	99.93
4hxt_A		252	De novo protein OR329; structural genomics, PSI-bi	99.89
1u6g_C		1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	99.89
4hxt_A		252	De novo protein OR329; structural genomics, PSI-bi	99.89
1u6g_C		1230	TIP120 protein, CAND1; cullin repeat, heat repeat,	99.88
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	99.87
4fdd_A		852	Transportin-1; heat repeats, karyopherin, nuclear	99.87
4db8_A		252	Armadillo-repeat protein; solenoid repeat, de novo	99.87
1b3u_A		588	Protein (protein phosphatase PP2A); scaffold prote	99.84
4fdd_A		852	Transportin-1; heat repeats, karyopherin, nuclear	99.83
1b3u_A		588	Protein (protein phosphatase PP2A); scaffold prote	99.83
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	99.81
4db6_A		210	Armadillo repeat protein; solenoid repeat, armadil	99.81
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	99.78
3tt9_A		233	Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	99.77
1qgr_A		876	Protein (importin beta subunit); transport recepto	99.77
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	99.77
2bpt_A		861	Importin beta-1 subunit; nuclear transport, nucleo	99.76
2bpt_A		861	Importin beta-1 subunit; nuclear transport, nucleo	99.73
1xqr_A		296	HSPBP1 protein; armadillo repeat, superhelical twi	99.73
3grl_A		651	General vesicular transport factor P115; vesicle t	99.69
1qgr_A		876	Protein (importin beta subunit); transport recepto	99.67
3grl_A		651	General vesicular transport factor P115; vesicle t	99.61
2vgl_B		591	AP-2 complex subunit beta-1; cytoplasmic vesicle,	99.59
2vgl_B		591	AP-2 complex subunit beta-1; cytoplasmic vesicle,	99.58
1oyz_A		280	Hypothetical protein YIBA; structural genomics, PS	99.54
1oyz_A		280	Hypothetical protein YIBA; structural genomics, PS	99.51
1w63_A		618	Adapter-related protein complex 1 gamma 1 subunit;	99.48
1w63_A		618	Adapter-related protein complex 1 gamma 1 subunit;	99.39
3ltm_A		211	Alpha-REP4; protein engineering, heat-like repeat,	99.38
3ltj_A		201	Alpharep-4; protein engineering, heat-like repeat,	99.34
3ltm_A		211	Alpha-REP4; protein engineering, heat-like repeat,	99.3
3ltj_A		201	Alpharep-4; protein engineering, heat-like repeat,	99.27
1ibr_B		462	P95, importin beta-1 subunit, nuclear factor; smal	99.21
2vgl_A		621	Adaptor protein complex AP-2, alpha 2 subunit; cyt	99.14
1ibr_B		462	P95, importin beta-1 subunit, nuclear factor; smal	99.01
2vgl_A		621	Adaptor protein complex AP-2, alpha 2 subunit; cyt	98.96
4ady_A		963	RPN2, 26S proteasome regulatory subunit RPN2; prot	98.87
4gmo_A		684	Putative uncharacterized protein; ARM, heat, solen	98.74
4ady_A		963	RPN2, 26S proteasome regulatory subunit RPN2; prot	98.74
4gmo_A		684	Putative uncharacterized protein; ARM, heat, solen	98.56
3b2a_A		265	TON_1937, putative uncharacterized protein; heat-r	98.31
1te4_A		131	Conserved protein MTH187; methanobacterium thermoa	98.26
1te4_A		131	Conserved protein MTH187; methanobacterium thermoa	98.18
1ho8_A		480	Vacuolar ATP synthase subunit H; heat repeat, hydr	98.11
2x19_B		963	Importin-13; nuclear transport, protein transport;	98.11
3b2a_A		265	TON_1937, putative uncharacterized protein; heat-r	98.08
3tjz_B		355	Coatomer subunit gamma; protein trafficking, golgi	98.06
1wa5_C		960	Importin alpha RE-exporter; nuclear transport/comp	98.06
3tjz_B		355	Coatomer subunit gamma; protein trafficking, golgi	97.94
2x1g_F		971	Cadmus; transport protein, developmental protein,	97.91
2db0_A		253	253AA long hypothetical protein; heat repeats, hel	97.9
2x1g_F		971	Cadmus; transport protein, developmental protein,	97.89
2qk2_A		242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	97.86
2qk2_A		242	LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2	97.82
2db0_A		253	253AA long hypothetical protein; heat repeats, hel	97.81
2x19_B		963	Importin-13; nuclear transport, protein transport;	97.67
1wa5_C		960	Importin alpha RE-exporter; nuclear transport/comp	97.58
2qk1_A		249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	97.56
1ho8_A		480	Vacuolar ATP synthase subunit H; heat repeat, hydr	97.56
2iw3_A		986	Elongation factor 3A; acetylation, ATP-binding, pr	97.54
4hat_C		1023	Exportin-1; heat repeat, nuclear export, RAN-ranbp	97.53
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	97.5
2qk1_A		249	Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h	97.46
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	97.21
4hat_C		1023	Exportin-1; heat repeat, nuclear export, RAN-ranbp	97.14
2iw3_A		986	Elongation factor 3A; acetylation, ATP-binding, pr	96.82
1lrv_A		244	LRV, leucine-rich repeat variant; leucine-rich rep	96.81
3m1i_C		1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	96.68
1lrv_A		244	LRV, leucine-rich repeat variant; leucine-rich rep	96.53
3dad_A		339	FH1/FH2 domain-containing protein 1; formin, FHOD1	96.48
3dad_A		339	FH1/FH2 domain-containing protein 1; formin, FHOD1	96.47
3ibv_A		980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	95.77
3oc3_A		800	Helicase MOT1, MOT1; regulation of transcription,	94.93
2of3_A		266	ZYG-9; multifunctional macromolecule, kinetochore,	93.94
3oc3_A		800	Helicase MOT1, MOT1; regulation of transcription,	93.55
4ffb_C		278	Protein STU2; tubulin fold, heat repeats, cytoskel	93.54
4ffb_C		278	Protein STU2; tubulin fold, heat repeats, cytoskel	93.2
2of3_A		266	ZYG-9; multifunctional macromolecule, kinetochore,	93.18
3a6p_A		1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	92.86
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	91.72
1upk_A		341	MO25 protein; transferase, armadillo; HET: MSE; 1.	90.82
3l9t_A		240	Putative uncharacterized protein SMU.31; hypotheti	90.71
3ebb_A		304	Phospholipase A2-activating protein; armadillo rep	89.18
3l9t_A		240	Putative uncharacterized protein SMU.31; hypotheti	88.21
3gjx_A		1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	88.15
2fv2_A		268	RCD1 required for cell differentiation1 homolog; a	86.15
3u0r_A		507	Apoptosis inhibitor 5; heat repeat, armadillo repe	85.46
3ebb_A		304	Phospholipase A2-activating protein; armadillo rep	85.03
2fv2_A		268	RCD1 required for cell differentiation1 homolog; a	84.99
3c2g_A		619	SYS-1 protein; beta-catenin, phylogeny, SYS-1, dev	84.85
1lsh_A		1056	Lipovitellin (LV-1N, LV-1C); vitellogenin, lipopro	83.63
1lsh_A		1056	Lipovitellin (LV-1N, LV-1C); vitellogenin, lipopro	83.39
1upk_A		341	MO25 protein; transferase, armadillo; HET: MSE; 1.	80.99
3u0r_A		507	Apoptosis inhibitor 5; heat repeat, armadillo repe	80.19

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}	Back alignment and structure

Probab=100.00  E-value=5.7e-49  Score=513.54  Aligned_cols=711  Identities=15%  Similarity=0.141  Sum_probs=560.7

Q ss_pred             hhhHHHHHHHHHHHHccCCChhHHHHHHHHHHHHHhchhhHhhhhhccCCchHHHHHHhhc-CCHHHHHHHHHHHHHhhc
Q 000181           16 DGTLASVAQCIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRS-GSLAVKIQAATVLGSLCK   94 (1890)
Q Consensus        16 ~~~~~~v~~~~~~l~~~~~~~~~ke~A~~~L~~l~~~~~~~r~~i~~~~g~v~~Lv~lL~~-~~~~~~~~aa~~L~~L~~   94 (1890)
                      .+|.++|.+|++.+++.+.+.+.|++|+++|..|+++..+++.++.  .|+++.|.++|++ .++++...|.++|..+|+
T Consensus         2 ~~~~~kv~~m~~i~~~~~~~~~~~~~a~~nl~vl~re~aga~~i~~--~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~   79 (810)
T 3now_A            2 AKTSTKVKQMMDLTFDLATPIDKRRAAANNLVVLAKEQTGAELLYK--DHCIAKVASLTKVEKDQDIYVNMVHLVAALCE   79 (810)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHSSCHHHHHHHHH--TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred             CcccHHHHHHHHHHcccccCHHHHHHHHhhceeeeccccchHHHHh--CchHHHHHHHHhccCchhHHHHHHHHHHHHHh
Confidence            3688999999999999888889999999999999999989999664  6899999999998 779999999999999999


Q ss_pred             cchhhH-HHHhcCChHHHHHhhcCCCHHHHHHHHHHHH----HHhcCCCCCccccc-hhhhcC------ChHHHHHHHhc
Q 000181           95 ENELRV-KVLLGGCIPPLLGLLKSSSAEGQIAAAKTIY----AVSQGGAKDYVGSK-IFSTEG------VVPVLWEQLKN  162 (1890)
Q Consensus        95 ~~~~~~-~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~----~ls~~~~~~~~~~~-~~~~~g------~ip~L~~ll~~  162 (1890)
                      ++..|. .++..-++|.++++|.+++.+...+++..+.    .++.++.+.+.+.. .++...      ++..|++++..
T Consensus        80 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (810)
T 3now_A           80 NSVERTKGVLTELGVPWFMRVLDQKHENCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITD  159 (810)
T ss_dssp             TCHHHHHHHHHHSCHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHTCCSSTTCCCCHHHHHHTHHHHHHHHHHHHHHHTC
T ss_pred             ccHHHHHHHHHHcCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccccccccCCcHHHHhhhhhHHHHHHHHHHHHhhc
Confidence            997776 4566678999999999999888877766544    46665554443332 233322      35567888888


Q ss_pred             cCCCCchHHHHHHHHHHHhccCChhHHHHHHhcCCHHHHHHhhcCC-----------CHHHHHHHHHHHHHHhhcCchhh
Q 000181          163 GLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLG-----------QSSTQAHVCFLLACMMEEDVSVC  231 (1890)
Q Consensus       163 ~~~~~~~v~~~~~~~L~~L~~~~~~~~~~i~~~g~v~~Lv~lL~~~-----------~~~v~~~a~~~L~~L~~~~~~~~  231 (1890)
                      ...+............+|+-..+-......+..||+..|+..-..-           .+++|.++.-+|.++........
T Consensus       160 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~  239 (810)
T 3now_A          160 RTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDE  239 (810)
T ss_dssp             TTSCHHHHHHHHHHHHHHTTCTTTTHHHHHHHTTHHHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHH
T ss_pred             cccChhhHHHHHHHHHHhCCccccccccchhhHhhHHHHHHHHhcCccccccccCCCChhHHHHHHHHHHHHHHHhccch
Confidence            7777665665555566776543211111144568999999987751           56899999999999875433111


Q ss_pred             -hHhhccchHHHHHHHHcCCCCHhHHHHHHHHHHHhhhcCHHHHHHHH-hcCChHHHHHhhcCCCccccchhhhHHHHHH
Q 000181          232 -SRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIA-GSNGIPAMINATIAPSKEFMQGEYAQALQEN  309 (1890)
Q Consensus       232 -~~i~~~g~i~~Lv~lL~~~~~~~~~~~Aa~aL~~Ls~~~~~~~~~i~-~~g~i~~Lv~ll~~~~~~~~~~~~~~~l~e~  309 (1890)
                       .+.+. ..+..+++-.-...+.+-+..|++++.++..+.++....++ ..|+++.++.++.+++         ..++++
T Consensus       240 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~---------~~~q~~  309 (810)
T 3now_A          240 AKARFT-DQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDD---------ELQQRV  309 (810)
T ss_dssp             HHHHHH-HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSC---------HHHHHH
T ss_pred             hHHHHH-HHHHHHHHHHhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCC---------HHHHHH
Confidence             11111 22333333322334677889999999999999998877776 7899999999998864         789999


Q ss_pred             HHHHHHHhhCCCchhhhhhhccccCCCChhhhhhhHhHHHHHHHHhcccccCCCCCChhhhHHHHHhhcCCCCChHHHHH
Q 000181          310 AMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPRLPFLVQER  389 (1890)
Q Consensus       310 a~~aL~nl~~~~~~~i~~l~~~~~~~~~~~~~~~~~gal~~ll~~~~~~~~~~~~~~~~~i~~~L~~ll~~~~~~~~~~~  389 (1890)
                      |++++.+++.+ +.....             +.                        ..++ +.|..++++++ ..+|.+
T Consensus       310 A~~al~~aa~~-~~~R~~-------------I~------------------------~~gv-~~L~~Ll~s~~-~~vr~~  349 (810)
T 3now_A          310 ACECLIAASSK-KDKAKA-------------LC------------------------EQGV-DILKRLYHSKN-DGIRVR  349 (810)
T ss_dssp             HHHHHHHHTTS-HHHHHT-------------TH------------------------HHHH-HHHHHHTTCSC-HHHHHH
T ss_pred             HHHHHHHHcCC-cHHHHH-------------HH------------------------HcCc-HHHHHHHcCCC-HHHHHH
Confidence            99999998764 221111             11                        1234 67888887655 446999


Q ss_pred             HHHHHHHhhCCC--ccchhhhhcCc----HHHHHHHhcCC--CHHHHHHHHHHHHHhhccCchhhHHHHhcCcHHHHHHh
Q 000181          390 TIEALASLYGNP--LLSIKLENSEA----KRLLVGLITMA--TNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISL  461 (1890)
Q Consensus       390 a~~aL~~L~~~~--~~~~~l~~~g~----i~~Lv~lL~~~--~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~l  461 (1890)
                      |+.+|++++.+.  +......+.|.    ++.++.+|.++  +++++++|+++|.+|+.........+.+.|++|.|+++
T Consensus       350 Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~L  429 (810)
T 3now_A          350 ALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDL  429 (810)
T ss_dssp             HHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHHhccccccCccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHH
Confidence            999999996432  23323333344    56677888877  88999999999999998854444445567999999999


Q ss_pred             hCCCCHHHHHHHHHHHHHcccCCh-----------------------------hcH---HHHHhcCCcHHHHHhccCCCH
Q 000181          462 LGLSSEQQQECSVALLCLLSNEND-----------------------------DSK---WAITAAGGIPPLVQILESGSA  509 (1890)
Q Consensus       462 L~~~~~~v~~~A~~aL~nL~~~~~-----------------------------~~~---~~i~~~g~i~~Lv~lL~~~~~  509 (1890)
                      |++++..+++.|+++|.||+.+.+                             ..+   +.++++|++|+|+++|.++++
T Consensus       430 L~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~  509 (810)
T 3now_A          430 ARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESH  509 (810)
T ss_dssp             HHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCH
T ss_pred             hCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCH
Confidence            999999999999999999997542                             122   788999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHhCCCHHHHHHHhhcCChhHHHHHHHHHHHHhcCCCCCcHHHHHHHHhcCCcchHH
Q 000181          510 KAKEDSASILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKV  589 (1890)
Q Consensus       510 ~~~e~a~~aL~~L~~~~~~~r~~i~~~g~i~~Lv~ll~~~~~~~~~~Aa~aL~~L~~~~~~~~i~~L~~lL~~~~~~~~~  589 (1890)
                      .+|+.|+|+|+||+. ++++|..+.++|++|+|+.+++++++..++.|+++|.||+.+.++..+                
T Consensus       510 ~vqe~Aa~aL~NLA~-d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~----------------  572 (810)
T 3now_A          510 NSQELIARVLNAVCG-LKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVS----------------  572 (810)
T ss_dssp             HHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHH----------------
T ss_pred             HHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhh----------------
Confidence            999999999999997 578999999999999999999999999999999999999875543100                


Q ss_pred             HHHHHHHHHhhhcCchHHHHHhhhhcchHHHHHHHhcCC-CHHHHHHHHHHHHHHhhcChhHHHHHHHcCchHHHHHhhc
Q 000181          590 YVLDALKSMLSVVSFSDILREGSAANDAVETMIKILSST-KEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLD  668 (1890)
Q Consensus       590 ~a~~aL~~L~~~~~~~~~~~~~~~~~~~i~~Lv~lL~s~-~~~~~~~A~~aL~~L~~~~~~~~~~~~~~g~i~~Lv~lL~  668 (1890)
                                        + ......+++|+|+++|.++ +...+..|+++|.||+..+++.+..+++.|++|+|+.++.
T Consensus       573 ------------------~-~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~  633 (810)
T 3now_A          573 ------------------F-SGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLM  633 (810)
T ss_dssp             ------------------T-TTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHH
T ss_pred             ------------------h-cchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHc
Confidence                              0 0001134799999999876 5566789999999999998888889999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHccCchhhHHHHHh-CCChHHHHHHhCCCCHHHHHHHHHHHHHHhc-CchHHHHHHh-cCcHH
Q 000181          669 VGSECILVEASRCLAAIFLSVRENREVAAVA-RDALSPLVVLAGSPVLEVAEQATCALANLIL-DSEVSEKAIA-EEIIL  745 (1890)
Q Consensus       669 ~~~~~v~~~a~~aL~~L~~~~~~~~~~~~~~-~~~v~~Lv~ll~~~~~ev~~~aa~aL~nL~~-~~~~~~~~~~-~~~v~  745 (1890)
                      ++++.+++.|+++|+||+.+. +..+. +.+ .|+++.|+.++.+++.++|+.|+|||+||+. ++.....++. .++++
T Consensus       634 s~~~~Vq~~A~~~L~NLa~~~-~~~~~-~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~  711 (810)
T 3now_A          634 EDHLYLTRAAAQCLCNLVMSE-DVIKM-FEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLD  711 (810)
T ss_dssp             SCCTTHHHHHHHHHHHHTTSH-HHHHH-HHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHH
T ss_pred             CCCHHHHHHHHHHHHHHhCCh-HHHHH-HHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHH
Confidence            999999999999999998764 34444 454 7999999999999999999999999999997 6777788887 89999


Q ss_pred             HHHHHHhcCCcchHHHHHHHHHHHhhcCccchhHhhhhhhhccHHHHHHHhhcc---CcccchHHHHHHHHHHHhcCC
Q 000181          746 PATRVLCEGTISGKTLAAAAIARLLHSRKIDYTITDCVNRAGTVLALVSFLESA---SGSVATSEALDALAILSRSGG  820 (1890)
Q Consensus       746 ~L~~ll~~~~~~~~~~aa~aL~~L~~~~~~~~~~~~~~~~~g~l~~li~~l~~~---~~~v~~~~al~~L~~l~~~~~  820 (1890)
                      +|++++++++.++++.|+|+|.|+..+.   .....++.+.|++++|++++..+   +.++. +.|+++|.++++.+.
T Consensus       712 ~Lv~LL~s~d~~vq~~A~~aL~NL~~~s---~e~~~~l~e~G~i~~L~~LL~~~d~~~~~i~-e~Al~aL~~ll~~g~  785 (810)
T 3now_A          712 ILHTLIANPSPAVQHRGIVIILNMINAG---EEIAKKLFETDIMELLSGLGQLPDDTRAKAR-EVATQCLAAAERYRI  785 (810)
T ss_dssp             HHHHHHTCSSHHHHHHHHHHHHHHHTTC---HHHHHHHHTSTHHHHHTTSCCCTTSTTHHHH-HHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHCCCHHHHHHHHhCcccCcHHHH-HHHHHHHHHHHhCCC
Confidence            9999999999999999999999998743   23456677889999999999876   36677 999999999987664

PyMOL of 3now

>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}	Back alignment and structure

>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}	Back alignment and structure

>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A	Back alignment and structure

>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}	Back alignment and structure

>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...	Back alignment and structure

>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B	Back alignment and structure

>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...	Back alignment and structure

>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A	Back alignment and structure

>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A	Back alignment and structure

>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A	Back alignment and structure

>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}	Back alignment and structure

>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24	Back alignment and structure

>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A	Back alignment and structure

>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24	Back alignment and structure

>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A	Back alignment and structure

>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A	Back alignment and structure

>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}	Back alignment and structure

>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}	Back alignment and structure

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}	Back alignment and structure

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A	Back alignment and structure

>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}	Back alignment and structure

>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}	Back alignment and structure

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*	Back alignment and structure

>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}	Back alignment and structure

>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A	Back alignment and structure

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*	Back alignment and structure

>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A	Back alignment and structure

>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	Back alignment and structure

>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}	Back alignment and structure

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*	Back alignment and structure

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A	Back alignment and structure

>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A	Back alignment and structure

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*	Back alignment and structure

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A	Back alignment and structure

>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A	Back alignment and structure

>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A	Back alignment and structure

>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B	Back alignment and structure

>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B	Back alignment and structure

>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16	Back alignment and structure

>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16	Back alignment and structure

>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1	Back alignment and structure

>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1	Back alignment and structure

>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}	Back alignment and structure

>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}	Back alignment and structure

>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}	Back alignment and structure

>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}	Back alignment and structure

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A	Back alignment and structure

>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A	Back alignment and structure

>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A	Back alignment and structure

>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A	Back alignment and structure

>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N	Back alignment and structure

>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A	Back alignment and structure

>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N	Back alignment and structure

>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A	Back alignment and structure

>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}	Back alignment and structure

>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16	Back alignment and structure

>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16	Back alignment and structure

>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B	Back alignment and structure

>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}	Back alignment and structure

>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}	Back alignment and structure

>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A	Back alignment and structure

>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}	Back alignment and structure

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}	Back alignment and structure

>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}	Back alignment and structure

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}	Back alignment and structure

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}	Back alignment and structure

>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}	Back alignment and structure

>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}	Back alignment and structure

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B	Back alignment and structure

>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A	Back alignment and structure

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}	Back alignment and structure

>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9	Back alignment and structure

>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A	Back alignment and structure

>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*	Back alignment and structure

>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}	Back alignment and structure

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B	Back alignment and structure

>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B	Back alignment and structure

>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A	Back alignment and structure

>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5	Back alignment and structure

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B	Back alignment and structure

>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5	Back alignment and structure

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}	Back alignment and structure

>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}	Back alignment and structure

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*	Back alignment and structure

>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}	Back alignment and structure

>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}	Back alignment and structure

>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi}	Back alignment and structure

>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}	Back alignment and structure

>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}	Back alignment and structure

>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}	Back alignment and structure

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}	Back alignment and structure

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A	Back alignment and structure

>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*	Back alignment and structure

>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}	Back alignment and structure

>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}	Back alignment and structure

>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}	Back alignment and structure

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A	Back alignment and structure

>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}	Back alignment and structure

>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A	Back alignment and structure

>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}	Back alignment and structure

>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}	Back alignment and structure

>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A*	Back alignment and structure

>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1	Back alignment and structure

>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1	Back alignment and structure

>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A*	Back alignment and structure

>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1890
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	3e-24
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	2e-16
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	8e-13
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	3e-12
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	8e-12
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	6e-10
d1xm9a1		457	a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo	3e-08
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	1e-23
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	1e-20
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	1e-16
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	4e-16
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	1e-14
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	5e-13
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	1e-09
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	3e-09
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	6e-08
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	3e-06
d1jdha_		529	a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens)	9e-04
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	1e-16
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	2e-15
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	8e-12
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	2e-11
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	6e-09
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	1e-05
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	2e-04
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	7e-04
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	0.001
d1q1sc_		434	a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus	0.002
d1wa5b_		503	a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S	2e-13
d1wa5b_		503	a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S	2e-07
d1wa5b_		503	a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S	9e-07
d1u6gc_		1207	a.118.1.2 (C:) Cullin-associated NEDD8-dissociated	1e-07
d1u6gc_		1207	a.118.1.2 (C:) Cullin-associated NEDD8-dissociated	9e-06
d1u6gc_		1207	a.118.1.2 (C:) Cullin-associated NEDD8-dissociated	1e-04
d1u6gc_		1207	a.118.1.2 (C:) Cullin-associated NEDD8-dissociated	5e-04
d1xqra1		264	a.118.1.21 (A:87-350) Hsp70-binding protein 1 (Hsp	2e-07
d1xqra1		264	a.118.1.21 (A:87-350) Hsp70-binding protein 1 (Hsp	1e-06
d2vglb_		579	a.118.1.10 (B:) Adaptin beta subunit N-terminal fr	0.001

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Plakophilin 1 helical region
domain: Plakophilin 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (263), Expect = 3e-24
 Identities = 60/470 (12%), Positives = 130/470 (27%), Gaps = 30/470 (6%)

Query: 67  VPVLVSLLRSGSLAVKIQAATVLGSLCKEN-ELRVKVLLGGCIPPLLGLLKSSSAEGQIA 125
           +P  V  L S     +   A  +   C ++   + +V   G I  L+ LL+S +   Q A
Sbjct: 4   IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQA 63

Query: 126 AAKTIYAVSQGGAKDYVGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTST 185
           AA  +  +      +         +  +      L+        +   LTG L NLS++ 
Sbjct: 64  AAGALRNLVFRSTTN---KLETRRQNGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTD 118

Query: 186 EGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLACMMEEDVSVCSRVLAADATKQLLK 245
                  + A  + +L   + +  S        +   +++ +V         +AT  L  
Sbjct: 119 --ELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV-------FFNATGCLRN 169

Query: 246 LLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGEYAQA 305
           L  +          +G + SL  + ++       +       +                A
Sbjct: 170 LSSADAGRQTMRNYSGLIDSLMAYVQNCV-----AASRCDDKSVENCMCVLHNLSYRLDA 224

Query: 306 LQENAMCALANISGGLSNVISSLGQSLESCSSPAQV-ADTLGALASALMIYDSKAESTKP 364
                   L   +       SS G              D                  +  
Sbjct: 225 EVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDA 284

Query: 365 SDPLIVEQTLVNQFKPRLPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMAT 424
               +       +           + + A   L  + +  +     +    +  L+    
Sbjct: 285 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN 344

Query: 425 NEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISLLGLS------SEQQQECSVALLC 478
           ++V       L  +  +       + G +    +  LL         SE     +   + 
Sbjct: 345 SDVVRSGASLLSNMSRHPLL--HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVR 402

Query: 479 LLSNENDDSKWAITAAGGIPPLVQILES-GSAKAKEDSASILRNLCNHSE 527
            L            ++  +  ++ +  S  S KA E +  +L ++ +  E
Sbjct: 403 NLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 452

PyMOL of d1xm9a1

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 264	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 264	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1890
d1jdha_		529	beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jdha_		529	beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wa5b_		503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	99.97
d1q1sc_		434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	99.96
d1q1sc_		434	Importin alpha {Mouse (Mus musculus) [TaxId: 10090	99.96
d1wa5b_		503	Karyopherin alpha {Baker's yeast (Saccharomyces ce	99.95
d1xm9a1		457	Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1xm9a1		457	Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	99.83
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	99.78
d1b3ua_		588	Constant regulatory domain of protein phosphatase	99.77
d1b3ua_		588	Constant regulatory domain of protein phosphatase	99.77
d1xqra1		264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	99.63
d1xqra1		264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	99.61
d2vglb_		579	Adaptin beta subunit N-terminal fragment {Human (H	99.41
d2vglb_		579	Adaptin beta subunit N-terminal fragment {Human (H	99.34
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	99.31
d1qbkb_		888	Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96	99.21
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	99.21
d1oyza_		276	Hypothetical protein YibA {Escherichia coli [TaxId	99.18
d1oyza_		276	Hypothetical protein YibA {Escherichia coli [TaxId	99.15
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	99.14
d2bpta1		861	Importin beta {Baker's yeast (Saccharomyces cerevi	99.07
d1qgra_		876	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.57
d2vgla_		584	Adaptin alpha C subunit N-terminal fragment {Mouse	98.55
d2vgla_		584	Adaptin alpha C subunit N-terminal fragment {Mouse	98.47
d1ibrb_		458	Importin beta {Human (Homo sapiens) [TaxId: 9606]}	98.38
d1te4a_		111	MTH187 {Archaeon Methanobacterium thermoautotrophi	98.27
d1te4a_		111	MTH187 {Archaeon Methanobacterium thermoautotrophi	98.11
d1ho8a_		477	Regulatory subunit H of the V-type ATPase {Baker's	97.97
d1ho8a_		477	Regulatory subunit H of the V-type ATPase {Baker's	97.72
d1lrva_		233	Leucine-rich repeat variant {Azotobacter vinelandi	97.23
d1lrva_		233	Leucine-rich repeat variant {Azotobacter vinelandi	97.21
d1lsha1		336	Lipovitellin-phosvitin complex, superhelical domai	94.9
d1wa5c_		959	Exportin Cse1p {Baker's yeast (Saccharomyces cerev	93.78
d1upka_		330	Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}	92.98
d1lsha1		336	Lipovitellin-phosvitin complex, superhelical domai	92.71
d1upka_		330	Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}	89.86
d1wa5c_		959	Exportin Cse1p {Baker's yeast (Saccharomyces cerev	86.9

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: beta-Catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-36  Score=387.55  Aligned_cols=506  Identities=20%  Similarity=0.184  Sum_probs=419.9

Q ss_pred             CCchHHHHHHhhcCCHHHHHHHHHHHHHhhccchhhHHHHhc-CChHHHHHhhcC-CCHHHHHHHHHHHHHHhcCCCCCc
Q 000181           64 SQAVPVLVSLLRSGSLAVKIQAATVLGSLCKENELRVKVLLG-GCIPPLLGLLKS-SSAEGQIAAAKTIYAVSQGGAKDY  141 (1890)
Q Consensus        64 ~g~v~~Lv~lL~~~~~~~~~~aa~~L~~L~~~~~~~~~i~~~-g~i~~Lv~lL~~-~~~~~~~~a~~aL~~ls~~~~~~~  141 (1890)
                      .+++|.|+.+|++++..++.+|+.+|+++++++..+..+... |+++.|+.+|.+ ++.+.+..|+.+|.+++.    +.
T Consensus        16 ~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~----~~   91 (529)
T d1jdha_          16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSH----HR   91 (529)
T ss_dssp             -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT----SH
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhC----Cc
Confidence            488999999999999999999999999999888777777665 779999999975 678999999999999988    45


Q ss_pred             cccchhhhcCChHHHHHHHhccCCCCchHHHHHHHHHHHhccCChhHHHHHHhcCCHHHHHHhhcCCCHHHHHHHHHHHH
Q 000181          142 VGSKIFSTEGVVPVLWEQLKNGLKSGNVVDNLLTGALRNLSTSTEGFWAATVQAGGIDILVKLLTLGQSSTQAHVCFLLA  221 (1890)
Q Consensus       142 ~~~~~~~~~g~ip~L~~ll~~~~~~~~~v~~~~~~~L~~L~~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~v~~~a~~~L~  221 (1890)
                      .++..+++.|++|.|+.+++.   .++.++..++++|.++|.+.+..+..+.+.|+++.|+.+|++++++++..++.+|.
T Consensus        92 ~~~~~i~~~g~i~~Li~lL~~---~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~  168 (529)
T d1jdha_          92 EGLLAIFKSGGIPALVKMLGS---PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQ  168 (529)
T ss_dssp             HHHHHHHHTTHHHHHHHHTTC---SCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHCCCHHHHHHHhCC---CCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHHH
Confidence            566779999999999999975   46679999999999999988888888999999999999999999999999999999


Q ss_pred             HHhhcCchhhhHhhccchHHHHHHHHcCCCCHhHHHHHHHHHHHhhhcCHHHHHHHHhcCChHHHHHhhcCCCccccchh
Q 000181          222 CMMEEDVSVCSRVLAADATKQLLKLLGSGNEASVRAEAAGALKSLSDHCKDARREIAGSNGIPAMINATIAPSKEFMQGE  301 (1890)
Q Consensus       222 ~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~~Aa~aL~~Ls~~~~~~~~~i~~~g~i~~Lv~ll~~~~~~~~~~~  301 (1890)
                      +++..++..+..+.+.|+++.|+.++.++++..++..+++++.+++. +++++..+++.|+++.|+.++.+++       
T Consensus       169 ~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~-~~~~~~~~~~~g~~~~L~~ll~~~~-------  240 (529)
T d1jdha_         169 ILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV-CSSNKPAIVEAGGMQALGLHLTDPS-------  240 (529)
T ss_dssp             HHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT-STTHHHHHHHTTHHHHHHTTTTSSC-------
T ss_pred             HHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhc-cccccchhhhhhhhhhHHHHhcccc-------
Confidence            99988887888889999999999999887777899999999999998 6789999999999999999997764       


Q ss_pred             hhHHHHHHHHHHHHHhhCCCchhhhhhhccccCCCChhhhhhhHhHHHHHHHHhcccccCCCCCChhhhHHHHHhhcCCC
Q 000181          302 YAQALQENAMCALANISGGLSNVISSLGQSLESCSSPAQVADTLGALASALMIYDSKAESTKPSDPLIVEQTLVNQFKPR  381 (1890)
Q Consensus       302 ~~~~l~e~a~~aL~nl~~~~~~~i~~l~~~~~~~~~~~~~~~~~gal~~ll~~~~~~~~~~~~~~~~~i~~~L~~ll~~~  381 (1890)
                        ..++++++++|.|++....                                                           
T Consensus       241 --~~~~~~a~~~l~~ls~~~~-----------------------------------------------------------  259 (529)
T d1jdha_         241 --QRLVQNCLWTLRNLSDAAT-----------------------------------------------------------  259 (529)
T ss_dssp             --HHHHHHHHHHHHHHHTTCT-----------------------------------------------------------
T ss_pred             --hhhhhhhhhHHHhcccccc-----------------------------------------------------------
Confidence              6678888888888663110                                                           


Q ss_pred             CChHHHHHHHHHHHHhhCCCccchhhhhcCcHHHHHHHhcCCCHHHHHHHHHHHHHhhccCchhhHHHHhcCcHHHHHHh
Q 000181          382 LPFLVQERTIEALASLYGNPLLSIKLENSEAKRLLVGLITMATNEVQEELVRALLKLCNNEGSLWRALQGREGIQLLISL  461 (1890)
Q Consensus       382 ~~~~~~~~a~~aL~~L~~~~~~~~~l~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~l  461 (1890)
                                             ......|+++.|+.+++++++.++..++++|.+++.+++.++..+.+.++++.|+.+
T Consensus       260 -----------------------~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~  316 (529)
T d1jdha_         260 -----------------------KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRT  316 (529)
T ss_dssp             -----------------------TCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHH
T ss_pred             -----------------------chhhhhhcchhhhhhcccccHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHH
Confidence                                   011123678889999999999999999999999999888888889999999999998


Q ss_pred             hC--CCCHHHHHHHHHHHHHcccCChh---cHHHHHhcCCcHHHHHhccCCC-HHHHHHHHHHHHHHhcCChHHHHHHHh
Q 000181          462 LG--LSSEQQQECSVALLCLLSNENDD---SKWAITAAGGIPPLVQILESGS-AKAKEDSASILRNLCNHSEDIRACVES  535 (1890)
Q Consensus       462 L~--~~~~~v~~~A~~aL~nL~~~~~~---~~~~i~~~g~i~~Lv~lL~~~~-~~~~e~a~~aL~~L~~~~~~~r~~i~~  535 (1890)
                      +.  ++.+++++.++++|++++.....   .+..+...|+++.|+.++..++ ..++..++++|++++.+ ++++..+.+
T Consensus       317 l~~~~~~~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~~~~l~~l~~~-~~~~~~l~~  395 (529)
T d1jdha_         317 VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC-PANHAPLRE  395 (529)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTS-GGGHHHHHH
T ss_pred             HHhhhcchhHHHHHHHHhhcccchhhcchhhhhhHHhcccchhHHHHHhccchHHHHHHHHHHHhhcchh-hhhhhhhhh
Confidence            84  56788999999999999864332   4667888999999999998764 56788899999999984 788999999


Q ss_pred             CCCHHHHHHHhhcCChhHHHHHHHHHHHHhcCCCCCcHHHHHHHHhcCCcchHHHHHHHHHHHhhhcCchHHHHHhhhhc
Q 000181          536 ADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVSFSDILREGSAAN  615 (1890)
Q Consensus       536 ~g~i~~Lv~ll~~~~~~~~~~Aa~aL~~L~~~~~~~~i~~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~~~~~  615 (1890)
                      .|+++.|++++.+++...++.++............ ..           ++....+..++..++   ..+. .+..+...
T Consensus       396 ~g~i~~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~al~~la---~~~~-~r~~~~~~  459 (529)
T d1jdha_         396 QGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGV-RM-----------EEIVEGCTGALHILA---RDVH-NRIVIRGL  459 (529)
T ss_dssp             TTHHHHHHHHHHHHHHHHC-----------CBTTB-CH-----------HHHHHHHHHHHHHHT---TSHH-HHHHHHHT
T ss_pred             cccHHHHHHHHhcCCHHHHHHHHhhhhhHHhhccc-ch-----------HHHHHHHHHHHHHHc---cCHH-HHHHHHHC
Confidence            99999999999988777777777665554432211 11           123333444554443   2222 24456678


Q ss_pred             chHHHHHHHhcCCCHHHHHHHHHHHHHHhhcChhHHHHHHHcCchHHHHHhhcCCCHHHHHHHHHHHHHHH
Q 000181          616 DAVETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSVMKLLDVGSECILVEASRCLAAIF  686 (1890)
Q Consensus       616 ~~i~~Lv~lL~s~~~~~~~~A~~aL~~L~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~  686 (1890)
                      ++++.|+++|.++++.+++.|+++|++|+.+ ++.++.+...|++++|++++.++++.++..++.+|.+|+
T Consensus       460 ~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~-~~~~~~i~~~g~~~~L~~Ll~s~n~~v~~~a~~aL~~ls  529 (529)
T d1jdha_         460 NTIPLFVQLLYSPIENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS  529 (529)
T ss_dssp             TCHHHHHHGGGCSCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHhCCCCHHHHHHHHHHHHHHhcC-hhhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999976 677888999999999999999999999999999999874

PyMOL of d1jdha_

>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}	Back information, alignment and structure

>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}	Back information, alignment and structure

>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}	Back information, alignment and structure

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}	Back information, alignment and structure

>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure