Query 000193
Match_columns 1885
No_of_seqs 185 out of 250
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 22:49:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000193.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000193hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11894 DUF3414: Protein of u 100.0 7E-210 2E-214 2209.5 140.3 1515 4-1645 7-1684(1691)
2 KOG1835 Uncharacterized conser 100.0 1E-121 3E-126 1185.6 86.1 1561 148-1877 16-1703(1704)
3 KOG1835 Uncharacterized conser 100.0 4.2E-24 9E-29 280.5 62.9 947 444-1529 471-1577(1704)
4 PF10487 Nup188: Nucleoporin s 99.9 1.1E-18 2.4E-23 234.2 52.9 796 27-950 4-928 (931)
5 KOG4833 Uncharacterized conser 99.3 2.1E-10 4.6E-15 131.6 22.5 371 81-515 3-403 (573)
6 PF10508 Proteasom_PSMB: Prote 78.8 15 0.00032 48.4 12.4 184 1415-1620 162-366 (503)
7 PLN03205 ATR interacting prote 52.7 1.6E+02 0.0035 36.5 12.5 52 965-1016 534-597 (652)
8 PF10508 Proteasom_PSMB: Prote 38.4 6.7E+02 0.015 33.1 16.6 328 552-934 130-464 (503)
9 KOG0946 ER-Golgi vesicle-tethe 18.6 6.3E+02 0.014 34.6 10.5 163 814-1000 141-322 (970)
10 PF12783 Sec7_N: Guanine nucle 14.4 1.6E+03 0.034 24.7 12.1 124 808-953 35-163 (168)
No 1
>PF11894 DUF3414: Protein of unknown function (DUF3414); InterPro: IPR021827 This family of proteins are functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 764 to 2011 amino acids in length. This protein has a conserved LLG sequence motif.
Probab=100.00 E-value=7.4e-210 Score=2209.55 Aligned_cols=1515 Identities=31% Similarity=0.455 Sum_probs=1259.9
Q ss_pred hHHHHHHHHhhhCCCCCCChhhHHHHHHHHHHhHHHHHhcccCCCCChhhhhhhhcCceEcCCCCccccCHHHHHHHHHH
Q 000193 4 TKQLLATIESALLGPSPPSPAQRIELIHAIHNSLSSFKSLLSYPPPKPSDRAQVQSREVRLPDSPPISLDDQDVQIALKL 83 (1885)
Q Consensus 4 ~~~L~~~~e~~~~~~~~~~~~~~~~l~~~L~~~~~df~~ll~~ppkn~~sR~~l~sg~V~l~~~~~~~ln~~fi~~al~L 83 (1885)
|++||..++ +....+ +. ...++++.|++|+++|+++|++||||++||++|++|+|++++|++|+||++|+++|++|
T Consensus 7 f~~L~~~l~-~~~~~~-~~--~~~~l~~~L~~~~~~l~~ll~~p~kn~~sR~~l~sg~v~l~~g~~~~ln~~f~~~al~L 82 (1691)
T PF11894_consen 7 FKDLYNSLE-ALSSSD-PE--NVDELEQELEAHKPDLLNLLDNPPKNAKSRSQLESGKVTLGDGDEYKLNQEFIQEALIL 82 (1691)
T ss_pred HHHHHHHHH-HHhcCC-cc--hHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHhcCCeeeCCccccccCHHHHHHHHHh
Confidence 999999999 433332 33 23567789999999999999999999999999999999999988999999999999999
Q ss_pred hhhcCCCHHHHHHHHHhhcccccccCCChhhhhhhHhhHhHHhhHHHHHHHHHHHHhh---hcccCcchHHHHHHHHHHH
Q 000193 84 SDDLHLNEVDCVRLLVSANQECGLMGRDPIEILRLASGLWYTERRDLITALYILFRAV---VLDQGLEEDIVVDIQKYLE 160 (1885)
Q Consensus 84 SD~ldLdEi~a~eLL~~a~~~~~~~~~~~~~l~r~a~~lyy~~Rr~ll~~Lr~Ll~~~---~~~~~l~~~~~~~v~~~~~ 160 (1885)
||+|||||++|||||++|++++...|+++++ +|+++||+||++|++|||+|++++ .|+.+++++++..+.+|++
T Consensus 83 Sd~ldLdE~~a~~Ll~~a~~~~~~~g~~~~~---~Av~lyy~~R~~lL~~Lr~Ll~~~~~~~~~~~l~~~~~~~~~~~~~ 159 (1691)
T PF11894_consen 83 SDELDLDELEAAELLLTAESQSQFPGRSRGL---VAVILYYDRRRYLLDCLRLLLQARDGREWDSELSPELVSDVQKFTD 159 (1691)
T ss_pred hhhcCCCHHHHHHHHHHhhccCCCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Confidence 9999999999999999999998888888876 899999999999999999999998 3889999999999999999
Q ss_pred HHh-hchHHHHHHHHHHH-hccc-------ccCCCCCcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 000193 161 DLV-NTGLRQRLISLMKE-LNRE-------EPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLVVRTSP 231 (1885)
Q Consensus 161 ~l~-~~~l~~~il~~l~~-l~~~-------~~~~lg~~~~~~~v~d~~~~L~~~~e~~~~e~~~L~~~lil~~~~~~~~~ 231 (1885)
+++ +.|.+.++++.+++ ++.. +++++|++++.+. .|+.+ .+||+.||+|+++|+...++++
T Consensus 160 ~ll~~~~~i~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~l-------~~~~~~La~iL~~~~~~~~~~~ 229 (1691)
T PF11894_consen 160 KLLESMGLIERLLQLLKESIDKAKELGQLNTNRALGFQEHIEF---QRDSL-------FEEHESLAQILYLLVKQSYLSP 229 (1691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhcccccccccchhHHHH---HHHHH-------HHHHHHHHHHHHHHHhccCCCH
Confidence 999 45899999999998 6542 1224555544322 33334 4556679999999998888999
Q ss_pred hhHHHHHHHHHhhhhhccCCCCchhHHHHHHHHHHHHHHHHhhccCCCCCCCccccCCHHHHHHHHHHHhcCCCCCccch
Q 000193 232 KDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVIAFISDALSTVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEG 311 (1885)
Q Consensus 232 ~d~~~ll~~lk~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lh~~i~~~~~~w~~~~ 311 (1885)
++++++++++|+++++ |.+.+|+ +|++++++... ++++++..|+..+.++.+.+++.+.... +|+.+|
T Consensus 230 ~~~~~ll~~l~~~~~~----D~~~~~~------lpall~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~-~w~~~~ 297 (1691)
T PF11894_consen 230 EDFKKLLDHLKKLDSN----DFLTVHY------LPALLAAIDIS-GGSPLGSLPLSDDRELHSQIHKELDSDS-DWKLPG 297 (1691)
T ss_pred HHHHHHHHHHHhcCCC----chhhHHH------HHHHHHHHHhh-cccccccCcchhHHHHHHHHHHhhcccc-cccccc
Confidence 9999999999998776 7777877 66666666443 3566777766666666666666666532 499999
Q ss_pred HHHHHHHHHHHHHHh-hhchhhh-hcccCCCchhHHHhHHHHHHHHHhCChHHHHHHHHhcc------------------
Q 000193 312 FVGGVRLAWAVHLML-IHDEIAA-RETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRT------------------ 371 (1885)
Q Consensus 312 ~~a~i~law~~~l~~-~~~~~~~-~~~~~~~~~~~~~~i~~~~~~al~~~vf~fl~~~ll~~------------------ 371 (1885)
++++++|||+++|++ |++.|.. .+ ..++.++++++++.|+++|||+||+++++++
T Consensus 298 l~a~i~l~w~~~l~~~~~~~~~~~~~-----~~d~~~~~~~~~~~ai~~gaf~fL~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (1691)
T PF11894_consen 298 LKAVIQLAWLLFLIGWCKDDPSLEAQ-----GIDFKDDDEKLFEEAIEDGAFEFLLSIAADTPEWQDPSRWSNFYDFRSL 372 (1691)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccc-----ccCHHHHHHHHHHHHHHcChHHHHHHHHHhcccccchhhhhhhHHHHHH
Confidence 999999999999999 7776641 21 3446777889999999999999999998887
Q ss_pred ----cCCCC-----CchHH-HHHHHHHHHHHHHHHhhhhhhHhHHHHhhhhHHhhhhhhhhcCCcccccCCCCCCCCCCC
Q 000193 372 ----AAYQN-----DDEDM-VYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTE 441 (1885)
Q Consensus 372 ----~~~~~-----~~~~~-~~~~~~~~h~li~~fIs~p~~~~klkelr~~~d~~l~~~R~~~~~~feed~~~~~~~~~~ 441 (1885)
.|... .++.+ .+++.+++|.||++||+| |+.|||+||++|||.+.+ .+.+ ++++. ..++++
T Consensus 373 L~~~~p~~~~~~~~~s~~~~~~~~~~~l~~~i~~fI~~--m~~~l~~Lr~~eed~~~~---~~~~--~~~~~--~~~~~~ 443 (1691)
T PF11894_consen 373 LQRKIPRLTPENDSFSEFFNEEFFMRQLHSFIDSFISN--MPDKLRKLRDREEDSLLS---SQTH--QQEGE--DPPDDI 443 (1691)
T ss_pred HHhhccccccccccccHHHHHHHHHHHHHHHHHHHHHh--hHHHhhhhchhHHHHHHH---hHhh--hhcCC--CCCccc
Confidence 01000 13444 559999999999999996 888999999999999633 2332 22111 111346
Q ss_pred CCCCcHHHHHHHHHHHhcCCccccccccccc----------hhHhhhcccCCCcchHHHHHHHHHHhcCCchhHHHHHHH
Q 000193 442 IGPLPFVSLLEFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYEL 511 (1885)
Q Consensus 442 ~~~~dle~fl~~ia~~Y~~~p~~~~~~~~fW----------gFi~wa~~~~~~~~~~~afl~ML~sLa~~~~~A~~~~~~ 511 (1885)
+++.|||+||++|+++|++||+++ .+|| ||++||+++++ +++++|||+||+|||+|++||++||+|
T Consensus 444 ~~~~dlE~fl~~ia~~Y~~rPe~~---~~FW~d~e~~s~l~gFl~wa~~~~~-~~l~~af~~ML~sLs~g~~~A~~a~~~ 519 (1691)
T PF11894_consen 444 SLRADLERFLLLIAYLYDGRPELA---LEFWSDPEVTSNLYGFLRWASDRNP-SPLVSAFLEMLASLSSGPECASAAFNF 519 (1691)
T ss_pred chhhhHHHHHHHHHHHHcCChHHH---HHhCCCcccchhHhHHHHHHhhcCC-chhHHHHHHHHHHHcCChHHHHHHHHH
Confidence 789999999999999999999888 8999 59999999976 778899999999999999999999999
Q ss_pred hhCCC-----CccccHHHHHHHHHHHHHHhhc-cc-cCCC------CCCC--CCCcchHHHHHHHHHHHHHHHhcCcc--
Q 000193 512 LQGKA-----FRSIGWRTLFDCLSIYDEKFKQ-SL-QTGG------ALLP--DFQEGDAKALVAYLNVLQKVMENGNS-- 574 (1885)
Q Consensus 512 L~~~~-----~~~vSW~~if~~L~~Y~~~l~~-~~-~~~~------~~~~--~~~~~e~~~L~a~L~Li~~V~~~~~~-- 574 (1885)
|++++ .+++||+|||++|++|++++++ .. ++.+ ...+ +++|+|++||+|||+||++||++++.
T Consensus 520 L~~~~~~~~~~~~~SW~~if~~L~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~el~~ee~~~L~a~L~Li~~V~~~s~~ar 599 (1691)
T PF11894_consen 520 LKDNSGKGRRSSSVSWDQIFQSLQYYIDKLRQQQQQQQSQSIQRSRSPPPEIELSPEEVEMLSAYLRLISSVVRNSEQAR 599 (1691)
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHHHHHhccccCCCCccccccCCCCCcccCCCHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99765 4599999999999999999993 22 2111 1123 36999999999999999999999874
Q ss_pred ---ccccccCCChHHHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 000193 575 ---IERKNWFPDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVY 651 (1885)
Q Consensus 575 ---~e~~~w~~~i~~L~~Ll~~~~vp~~Lka~i~~~Laal~~~s~~~a~~iW~~Ld~~~i~~~~g~~~~~~~~~~~~~~~ 651 (1885)
+++++|.+ +++||+|++ |+||+.|||++|++|+||+..++++++.||+.||+|++....+++.+.. .++..
T Consensus 600 ~~l~~~~~~~~-~~~L~~L~~-~~vp~~Lkaai~~~Laal~~~~~~~~~~iW~~Ld~~~~~~~~~~~~~~~----~~~~~ 673 (1691)
T PF11894_consen 600 SALLENPNWNP-IDILFGLLS-CPVPPSLKAAIFNALAALAAKSPEIANQIWQLLDQWQILSTAPTPSSSA----LPQPS 673 (1691)
T ss_pred HHHHhCCCCch-HHHHHHHhc-CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCcccc----cCCCc
Confidence 45667875 899999999 6999999999999999995439999999999999998844432211111 12457
Q ss_pred cHHHHHHHHhhhccCCcchHHHHHHHHHhhcCC------------CCCCCCccc---cchhHHHHHHhhhCCCCccccCC
Q 000193 652 DMQFELNEIEARREQYPSTISFLNLLNALIAEE------------KDVSDRGRR---FVGIFRFVYDHVFGPFPQRAYAD 716 (1885)
Q Consensus 652 ~i~~el~~iE~~~~~Yp~T~aFl~Ll~~Li~~~------------~~~lg~g~R---~~~yi~FV~~~Vf~~~~~r~Y~~ 716 (1885)
|+..|++++|++.++||+|+||++||++|++++ |..+|.||| +|||++||+++||++ ++|.|++
T Consensus 674 ~i~~el~~~e~~~~~y~~t~aFl~Ll~~Li~~~~~~~~~~~~l~~P~~LG~~~R~~Gi~pY~~fv~~~Vf~~-~~r~y~~ 752 (1691)
T PF11894_consen 674 GIQSELEEFESRLEEYPETRAFLQLLNALISPPSDSSFLNDSLPFPENLGAGYRMPGIWPYVDFVLDEVFLK-SSRSYKD 752 (1691)
T ss_pred cHHHHHHHHHhhhcCCchHHHHHHHHHHHhCCCcccccccccCCCccccCccccCCCcHHHHHHHHHHHHhc-cchhcCC
Confidence 999999999999999999999999999999988 667999999 899999999999999 9999999
Q ss_pred chhhHHHHHHHHHHHHHHHhccCCChhhhhhhhhccCCcCCC----CCccccC---cHHHHHHHhccChHHHHHHHHhhc
Q 000193 717 PCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQS----SPIQMQL---PVLELLKDFMSGKAVFRNIMGILQ 789 (1885)
Q Consensus 717 ~~erw~v~~~~L~~~~~~L~~y~~~~~dl~~~~~~~~~~~~~----~~l~~~~---P~~~vm~~~L~~~~v~~~L~~ii~ 789 (1885)
+.|||+++..||++|+++|.+|+|+ +.....+++.+.+. .++.+|+ ||++||.+||+++++++.||+|++
T Consensus 753 ~~ekw~l~~~cL~~~~~~L~~f~~~---~i~~~~~~~~~~d~~~~~~~~~~~v~~hP~~~vm~~~l~~~~~~~~l~~ii~ 829 (1691)
T PF11894_consen 753 PSEKWQLALSCLEFFEKCLSSFDPS---FILNSNESNINLDSIVDTSDLATYVKLHPGFRVMLELLFDEKVLRSLFSIID 829 (1691)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHH---HHhhcccccccccccccccchhhhhhcCcHHHHHHHHhcCcHHHHHHHHHHH
Confidence 9999999999999999999999984 33333333332221 3455554 999999779999999999999999
Q ss_pred cChhhhhhhhcccccCcHHHHHHHHHHHHHHHHHhhhhhhhhhhccccc------chhhhh----------ccCchHHHH
Q 000193 790 PGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQ------PVDVIL----------SQDHNQIVA 853 (1885)
Q Consensus 790 ~gvd~l~~~~~~~~~~~~l~~~v~~aL~Il~~vL~~q~~f~d~lrp~~~------~l~~~L----------s~~~~~I~~ 853 (1885)
+|+|.+.++.+ +++++++++|+++||+|++++|++|++|++.+||+++ +.+.++ .++...|++
T Consensus 830 ~g~~~l~~~~~-~~~~~~l~~~v~~~L~Il~~vL~~Q~~f~~~~~p~~~~~~~~~~~~~~~~~~~sf~~~~~~~l~iv~~ 908 (1691)
T PF11894_consen 830 EGVDSLDSYSP-DPGGSPLEECVLRSLRILNRVLELQDTFLDVVRPILKSDIIYRPLDVLLLGLNSFEDAILFNLNIVVH 908 (1691)
T ss_pred HhHHHHhhcCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChHHHhhccCcchhhhcchHHHHHH
Confidence 99999987765 2357899999999999999999999999999999887 334333 357788999
Q ss_pred HHhhhcCCCcchhHHHHHHHHHHHhh--hH-------------HhHHHHHhccchhHHHHHHHHHHhccccccccc-ccc
Q 000193 854 LLEYVRYDFLPQIQQCSIKIMSILSS--RM-------------VGLVQLLLKYNAASSLVEDYAACLELRSEESQI-IEK 917 (1885)
Q Consensus 854 l~~yv~~~~~p~ial~AikIL~~ls~--~~-------------~~l~~~l~~~~es~~I~~~fv~~Le~~~~~~~~-~e~ 917 (1885)
||.|||.++ |+|++.|+|||++++. .. ++++++|++++++.+|++|||+|||.++++.++ .+.
T Consensus 909 l~l~~~~~~-p~ial~alkIL~~ls~s~~~~~~~~~~~~~~~~n~ll~~l~~~~es~~I~~~fv~~Le~~~~~~~~~~~~ 987 (1691)
T PF11894_consen 909 LGLYVGSDH-PEIALLALKILSKLSSSPKFNSADSFSSRRLRRNRLLTILESSDESERIRFGFVEQLEADIDEFEEGAES 987 (1691)
T ss_pred hHhhcCCCC-HHHHHHHHHHHHHHHcCCCCcccccccccccchhHHHHHHhcccHHHHHHHHHHHHHccccccccccccc
Confidence 999999877 9999999999999983 22 579999999999999999999999988655443 233
Q ss_pred CCCChHHHHHHHHHhcCCCC--CChHhhhhhccccCCCCccccccC----CCCcchHHHHHHHHHhcCCCC-------Cc
Q 000193 918 SGDDPGVLIMQLLIDNISRP--APNITHLLLKFDLDTPIERTVLQP----KFHYSCLKIILEILEKVSKPD-------VN 984 (1885)
Q Consensus 918 ~~~~~k~~IL~lLl~~L~~~--~PnlAHlLLGF~~~~~~~~~~l~p----~~~~ScLhsIL~lL~~~~~~~-------~~ 984 (1885)
....+|..||+||++||+.+ +||||||||||++++++..+..+| ++++||||+||++|+++++.. .+
T Consensus 988 ~~~~ik~~IL~lL~~~L~~~~~~PniAHlLLGF~~~~~~~~~~~~~~g~~~~~~S~lhsiL~lL~~~~~~~~~~~~~~~~ 1067 (1691)
T PF11894_consen 988 PSLSIKLAILDLLLENLSQPPPAPNIAHLLLGFDVRGNVSSLSLQDPGFFGSPRSCLHSILDLLESSLDSDSNSDIDYWP 1067 (1691)
T ss_pred hhhHHHHHHHHHHHHHhCCCCCCCcHHHHHhCCCcCCchhhcccccccccCCcCcHHHHHHHHHHhccccccCcchhccc
Confidence 34679999999999999755 999999999999998877888885 467999999999999987632 24
Q ss_pred hhHHHHHHHHHHHhhcCCCCCHHHHHHHhcchhhhHHHhhhhcC-CCCCCCCCCch------------hHHHHHHHHHHH
Q 000193 985 ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIG-VAPLPKRNSNQ------------ALRISSLHQRAW 1051 (1885)
Q Consensus 985 p~L~e~~~~lL~~Lc~~p~Ts~~~L~~LR~~~~dFf~~~L~~~~-i~~~p~~~~~~------------~~~~s~L~~rs~ 1051 (1885)
|+|+|+||+|||+||+||.||.+||||||+++ |||.+|+...| ++|.+.|+|.. .++.+||++|||
T Consensus 1068 ~~L~e~~~~ll~~Lc~~p~TS~~~L~~LR~~~-df~~~~l~~~p~i~~~~~w~g~~~~~~~f~~~~~~~~~~~~L~~Rs~ 1146 (1691)
T PF11894_consen 1068 PRLAELCYRLLYKLCSSPLTSEPTLRYLRSNN-DFFFRHLSSLPFIDPQTIWDGERISDPDFFLSTSASALISFLHQRSW 1146 (1691)
T ss_pred HHHHHHHHHHHHHHHcCCcchHHHHHHHHhHH-HHHHHHHHcCCCCCcccccccccccccccccCCchHHHHHHHHHHHH
Confidence 89999999999999999999999999999975 99999999999 78899999753 278899999999
Q ss_pred HHHHHHHHHHhhcCCCchhhHHHHHHHHHhcCCCCCCCCCccccccccccccccccCcccccchhhhhccccccCCCCCc
Q 000193 1052 LLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEHAGTRTISKSKVLELLEVVQFRSPDT 1131 (1885)
Q Consensus 1052 lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~lld~l~F~~~~~ 1131 (1885)
+|||+|+|||.++. .++++.+++|++.|+|..... ..+ +.....+.||+|||+++|.+ ..
T Consensus 1147 lL~~~AlEL~~~s~--~~~~s~~~~l~~~Ll~~~~~~-----------~~~------~~~~~~~~i~~lld~l~~~~-~~ 1206 (1691)
T PF11894_consen 1147 LLKYLALELHSLSQ--SGQRSQKRRLLSLLLGNSQSS-----------TDD------GEPIINPSIFDLLDFLDFDF-SW 1206 (1691)
T ss_pred HHHHHHHHHHHHHh--cCCHHHHHHHHHHHhcccccc-----------CCC------CCCccccHHHHHHhhhCCCc-cc
Confidence 99999999999874 478889999999999922111 011 11124556999999999999 22
Q ss_pred hhhhhhhhhhcchhhHHHHHhcCCCCCCCCCceeecCCccchhcHHHHHHHHHHhhhhccccccCCCchhhHhHHHHHHH
Q 000193 1132 AMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNFGSEAELNDVKEAIQ 1211 (1885)
Q Consensus 1132 ~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~~~di~~l~~~L~~e~~~~~~~~~~~~~~~~~~~~~~Ei~ 1211 (1885)
..+.|++ ++|.+..++..+.+|. . +.+|++++|+.++++++..+.+..+++.. . +.++.+.+++|++
T Consensus 1207 ~~~~~~l--~~f~~~~l~~~~~~c~-~--------~~~g~~~~Dl~~l~~lL~~~~~~~~~~~~-~-~~~~~~~v~~E~~ 1273 (1691)
T PF11894_consen 1207 EFPPPQL--EFFDDLDLELCLEECT-D--------SEGGVRLYDLSKLHELLQLERKSLQSSGQ-L-TAQQREAVEEEIQ 1273 (1691)
T ss_pred CCCCchh--hhhchhcHHHHHHhcc-c--------cCCCCeEeeHHHHHHHHHHHHHHhhcccc-c-chhhHHHHHHHHH
Confidence 3344443 5566667777777772 1 33467899999999999999988877521 1 4567888999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHhhhccC-CCccchHHHHHHHHHHHHH
Q 000193 1212 QLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSEILYQILDACLGASA-SPDCSLRMAFILCQVALTC 1290 (1885)
Q Consensus 1212 ~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~~~~~~~r~~~Il~~L~~il~ki~-~~~~~~~~a~~Ls~l~l~L 1290 (1885)
.|++|++++|+.++.++||+++|+||+|||+|++++|......|.++|+|+|+.++||++ ..+.+++++.++++++++|
T Consensus 1274 ~il~~~~~~N~~~~~~~a~~~~L~sW~qLv~V~~~~~~l~~~~r~~~ile~Lq~iLpkl~~~~~~~~~~a~~ls~l~l~L 1353 (1691)
T PF11894_consen 1274 KILEYAVARNRRRELAAAQLHALESWRQLVEVLVSDCPLSPDQRSNFILELLQAILPKLEDYPECDPEFAEELSSLALTL 1353 (1691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHhhcccccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998889999999999999999999 5889999999999999999
Q ss_pred HHHhhhccccCCCCCCCCCccchhhhhhcccccchhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcccCCCCc
Q 000193 1291 MAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAILRNESSEALRRRQYALLLSYFQYCQHMLAPDVP 1370 (1885)
Q Consensus 1291 l~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~Il~~~ss~~lR~~lY~~ll~yLq~~~~~~~~~~~ 1370 (1885)
+++||+++..... ....++++.+++++||+.+|+||++|++++.+|+|+|++|++||+++.+....+..
T Consensus 1354 ~~~L~~~~~~~~~-----------~~~~~~l~~~~L~~lf~~~l~~Il~~~ss~~lR~~lY~~l~~yL~~~~~~~~~~~~ 1422 (1691)
T PF11894_consen 1354 LAKLRQDRISQSD-----------SEDSGSLPDSRLHQLFKSCLQGILSSGSSQRLRSNLYAILLNYLQIVQKNSSLEDG 1422 (1691)
T ss_pred HHHHHhhhhcccc-----------cccccccchhHHHHHHHHHHHHHhccCCCHhHHHHHHHHHHHHHHHhcccccccch
Confidence 9999998641100 11134588889999999999999999999999999999999999999876531111
Q ss_pred hhHHHhhhcccccCcchhhhhhhhHHHHhHHHHHHHHHHhhhHHHHHHhhcccCCCcchHHHHHHHHHHHHhcc---Cch
Q 000193 1371 TTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGKTLSLYVLDALICID---HEK 1447 (1885)
Q Consensus 1371 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~e~LidvIc~DA~~G~~~~r~~Al~lLd~Lv~l~---~~~ 1447 (1885)
..... +..+ ++....++++++++|+++|++|||+||+||++|||+|||+|++|||+|+++| .++
T Consensus 1423 ~~~~~----~~~~---------~~~~~~l~~~~~~~i~~~g~~Li~vic~DA~~g~~~~r~~Al~lLdaLv~ld~~~~~~ 1489 (1691)
T PF11894_consen 1423 QSLSS----RLDD---------SSEQSSLEKMNLQIIKSYGERLIDVICRDAIDGHGVCRILALSLLDALVQLDSQEKSN 1489 (1691)
T ss_pred hcchh----hccc---------chhhHHHHHHHHHHHHHhhhHHHHHHHhHhhcCcccHHHHHHHHHHHHHHhccccccc
Confidence 11110 0000 1122358999999999999999999999999999999999999999999999 579
Q ss_pred hHHHHHhhcCcHHHHHHHhhhh--hhhcccC-CcchhhHHHHHHHHHHHHHHhhcccCcchHHHHHhcchHHHhhhcccc
Q 000193 1448 YFLNQLQSRGFLRSCLMNVSNV--SYQDGKR-SLDTLQRACTLEAELALLLRISHKYGKSGAQVLFSMGSLEHIASCKAV 1524 (1885)
Q Consensus 1448 ~il~~L~~~g~L~~~v~sl~~~--~L~~~l~-~~~~l~~L~~yea~malLlRiAq~~tr~GA~~Ll~~~l~~~L~~~~~l 1524 (1885)
+|+++|.|+|||+++|++++++ .+++.+. .|+++++||+|||+|+||+|||| ||.||++|+++|+|++|++|+||
T Consensus 1490 ~il~~L~~~g~L~~lv~sl~~~d~~l~~~~~~~~~~l~~L~~yea~laLL~RiAq--tr~GA~~Ll~~~lf~~L~~~~~l 1567 (1691)
T PF11894_consen 1490 FILEYLSRRGYLKSLVDSLKRTDEDLQASLQPIPDSLRELYVYEAKLALLLRIAQ--TRSGAEALLQSGLFQVLAECKFL 1567 (1691)
T ss_pred HHHHHHHhCCcHHHHHHHHHhhHHHHHhccCCCCcchHhHHHHHHHHHHHHHHHc--ChHHHHHHHHCCHHHHHHcCCCc
Confidence 9999999999999999999754 7888766 89999999999999999999999 89999999999999999999999
Q ss_pred cccCccccc--ccC--CCccCCchhhhhhHhHHHHHHHHHHHhhhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000193 1525 GLQGSLRRV--ATK--PRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDFIKGHQLLVDQVLQEN 1600 (1885)
Q Consensus 1525 ~~~P~~~~~--~~~--~~~~~p~~~~ry~~lL~PvlrL~~svl~~~~s~G~~~~n~~~~~qv~~Fl~~h~~lv~~vLr~~ 1600 (1885)
++|||.+.. .++ +..+ |++.+|||++|+||||||+++++++ | ++|++++.||++||.+|+++|++|||++
T Consensus 1568 ~~~Pdl~~~~~~~~~~~~~~-p~~~~ry~~lL~PvlrLi~ail~s~---G--~~n~~~~~qv~~FL~~h~~lv~~vLk~~ 1641 (1691)
T PF11894_consen 1568 DADPDLGLDLMFDNSDPMSF-PSALERYYQLLVPVLRLISAILSSL---G--SSNKSAVQQVLNFLKAHRDLVVGVLKRD 1641 (1691)
T ss_pred CCCCccchhhcccccccccC-chHHHHHHHHHHHHHHHHHHHHHhc---C--cccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999997643 222 2223 9999999999999999997777766 8 9999999999999999999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHhccccccCCchhhHHHHHHHHHHHh
Q 000193 1601 ISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLF 1645 (1885)
Q Consensus 1601 ~~~~~~~~L~el~ll~~ll~~~~~~~~~~~~~~~~~~~~l~~~l~ 1645 (1885)
++..+.+..+...++++...+.+++++.... .+++..|+.+++
T Consensus 1642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~f~ 1684 (1691)
T PF11894_consen 1642 ALIGNLGSSEIYSLVNSKLSKDWPYEESRLS--QQGLEELVKLFM 1684 (1691)
T ss_pred ccccccccccchhhhhhhhhhhhhhhhhhHH--HHHHHHHHHHHh
Confidence 9999888888888888888888777655322 456667666544
No 2
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.2e-121 Score=1185.62 Aligned_cols=1561 Identities=25% Similarity=0.290 Sum_probs=1175.7
Q ss_pred chHHHHHHHHHHHHHhhchHHHHHHHHHHHhcc-------cccCCCCCcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000193 148 EEDIVVDIQKYLEDLVNTGLRQRLISLMKELNR-------EEPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCL 220 (1885)
Q Consensus 148 ~~~~~~~v~~~~~~l~~~~l~~~il~~l~~l~~-------~~~~~lg~~~~~~~v~d~~~~L~~~~e~~~~e~~~L~~~l 220 (1885)
..++....+++++.++++ ..|....+.+++. ..++++|+.++..+|.+.. .+|.+.++ +
T Consensus 16 ~~~i~~~~~n~~~~Li~~--l~k~l~~~~~idl~~~~~~l~re~~~~~~~e~~~V~~~~----------~e~~~sla--l 81 (1704)
T KOG1835|consen 16 VSEIEFDLTNKTDLLINE--LEKYLWLLGEIDLNDERTKLDREKLFGGEVEMDGVEDLL----------DEEIQSLA--L 81 (1704)
T ss_pred HHHhccCCCCccHHHHHH--HHHHHHHHhhhhcCcHhHHHHHHhhcccccchHHHHHHH----------HHHHHHHH--H
Confidence 333333444666666654 3666667776643 1345899999888888865 45566677 6
Q ss_pred HHHH-HhccCChhhHHHHHHHHHhhhhh-ccCCCCc-hhHHHHHHHHHHHHHHHHhhccCCC-CCCCccccCCHHHHHHH
Q 000193 221 VLSV-LVVRTSPKDVKDAFSALKDSAAE-LSENNDT-LKHQITFSLLFSLVIAFISDALSTV-PDKSSVLSRDASFRKEF 296 (1885)
Q Consensus 221 il~~-~~~~~~~~d~~~ll~~lk~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~l 296 (1885)
+++. +....+..+-..+..++....-. +.|+.+. +..+..|+++++++++.+...++.+ ....++.+.|.+++.+.
T Consensus 82 ~Ls~~~~~~ln~~~~~~L~g~l~~q~~~~~~g~~~~~v~l~~~l~l~~~lv~sil~~~~~~~di~~~l~~~~~~~~i~e~ 161 (1704)
T KOG1835|consen 82 ILSDQLIFQLNREDALLLRGQLAAQKLHFAGGNLDLYVALRELLILLYALVTSILMLKEEREDIPTRLKIFLNSAFILEN 161 (1704)
T ss_pred HHhhhhhhcccchhHHHHhhHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHHhHHHHHHH
Confidence 6666 45556667778888888654433 6777666 8999999999999988655443222 23567888888999999
Q ss_pred HHHHhcCCCCCccchHHHHHHHHHHHHHHhhhchhhhhcccCCCchhHHHh-HHHHHHHHHhCChHHHHHHHHhcccCCC
Q 000193 297 HEIVMATGSDPIVEGFVGGVRLAWAVHLMLIHDEIAARETVSSSSSSELSN-IRSCLETIFSNNVFQFLLDKALRTAAYQ 375 (1885)
Q Consensus 297 h~~i~~~~~~w~~~~~~a~i~law~~~l~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~al~~~vf~fl~~~ll~~~~~~ 375 (1885)
+..+..+. -|..|.+.+.++++|...+.+..+.|... ..+++.+. .+-++.++.. ++|-|++..+...--|+
T Consensus 162 ~n~l~~qq-i~~~p~l~~~v~~~~~~~l~~~~~~~~i~-----~~~~f~~~~de~~v~e~~~-~~f~~~~~~~~~~hLf~ 234 (1704)
T KOG1835|consen 162 GNKLLFQQ-IWFFPVLSLIVRLILPLILGLLGSKSQIL-----QRAAFIEIRDEVHVSELDI-NVFPGINYLLASVHLFQ 234 (1704)
T ss_pred HHHHHHHH-HHhhhhHHHHHHHHHHHHhhcccchhHHH-----HHHHHHHHHHHHHHHHhhc-ccchhhhhHHHHHHHHH
Confidence 98888753 49999999999999998888877776411 12334333 4556666666 88999998877765454
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhhhhHhHHHHhhhhHHhhhhhhhhcCCcccccCCCCCCCCCCCCCCCcHHHHHHHHH
Q 000193 376 NDDEDMVYMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVS 455 (1885)
Q Consensus 376 ~~~~~~~~~~~~~~h~li~~fIs~p~~~~klkelr~~~d~~l~~~R~~~~~~feed~~~~~~~~~~~~~~dle~fl~~ia 455 (1885)
..+ |+.+..|.++++||+ +|..|.+++|.++++.. ++..+. +.. ..+.+...+.+++.++..++
T Consensus 235 ~~~-----f~~~~v~ll~T~f~~--~m~~~~s~l~~~~~~~i---~~vl~~--~~~----~~~~~~~lr~~~~~~ml~l~ 298 (1704)
T KOG1835|consen 235 IVK-----FVIRRVHLLITAFID--DMKIKSSELLPRADADI---FQVLTN--MIL----GIEPPPQLRSNAMCLMLQLA 298 (1704)
T ss_pred HHH-----HHHHHHHHHHHHHHH--hcccchHHhhhhHHHHH---HHHHHH--Hhc----ccCCCcccchhHHHHHHHHH
Confidence 443 779999999999999 69999999999998652 444331 111 11122234999999999999
Q ss_pred HHhcCCccccccccccc---------------------hhHhhhcccCCCcchHHHHHHHHHHhcC--CchhHHHHHHHh
Q 000193 456 EIYQKEPELLSGNDVLW---------------------TFVVFAGEDHTNFQTLVAFLKMLSTLAS--SQEGASKVYELL 512 (1885)
Q Consensus 456 ~~Y~~~p~~~~~~~~fW---------------------gFi~wa~~~~~~~~~~~afl~ML~sLa~--~~~~A~~~~~~L 512 (1885)
..+.+.|.....+.+|| .|++.|++.. +|..+.++.+|+.++++ ....+.+.++-.
T Consensus 299 ~~~~~~p~~~~~~~e~~~~~~p~~v~~~~~~s~~~~l~sfl~~a~~~l-~~t~~~~~~ki~s~l~~~~~~~~p~~~~e~~ 377 (1704)
T KOG1835|consen 299 EAVTSKPIAGSLSDELWIPNDPVIVERVKDRSRRVVLFSFLRQAIDLL-PHTNYIHQLKIFSGLTTSLLSYFPAKLVETE 377 (1704)
T ss_pred HHhcCCccccchhHHhcCCCCchhhHhhhhhhHHHHHHHHHHHhcccc-chhhHHHHHHHHHHHHHHHHHhcchhhhhhh
Confidence 99999999888889999 3999999885 24459999999999999 444455555666
Q ss_pred hCCCCccccHHHHHHHHHHHHHHhhccccCCCCC----CCCCCcchHHHHHHHHHHHHHHHhcCcc---ccccccCCChH
Q 000193 513 QGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGAL----LPDFQEGDAKALVAYLNVLQKVMENGNS---IERKNWFPDIE 585 (1885)
Q Consensus 513 ~~~~~~~vSW~~if~~L~~Y~~~l~~~~~~~~~~----~~~~~~~e~~~L~a~L~Li~~V~~~~~~---~e~~~w~~~i~ 585 (1885)
.|+ .++|.|+|++++.|++.+|++.++++++ .+.+++.++.+|.+|++++++|++.++. |.+++|.|. .
T Consensus 378 ~g~---gv~W~~ff~~~~~y~~~~r~~~~~~~~~i~~~l~t~~Q~~~~~l~a~l~vlq~iie~~~~~~~c~~p~~ep~-~ 453 (1704)
T KOG1835|consen 378 RGN---GVSWLHFFDSLRSYQTTTRKDLPPAGSTIYRTLKTIAQKEVSYLVAFLNVLQTIIEEDERFLLCFHPDWEPQ-V 453 (1704)
T ss_pred ccC---CccchhhhhhHhhhhHHhhccCCCcccceeeecchHHHHHHhhchhHHHHHHHHHhhchHHHhcCCCccccc-h
Confidence 665 3999999999999999999988776654 3356788999999999999999994442 777888753 3
Q ss_pred HHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhcCCCcccccCCCCCCCCCCCccccHHHHHHHHhhhcc
Q 000193 586 PLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVVVGTHVGNTAQPIAGQVYDMQFELNEIEARRE 665 (1885)
Q Consensus 586 ~L~~Ll~~~~vp~~Lka~i~~~Laal~~~s~~~a~~iW~~Ld~~~i~~~~g~~~~~~~~~~~~~~~~i~~el~~iE~~~~ 665 (1885)
++.+. . |++|+.||+++.++|+||+ +|..+|..+|+.+++... +.++. ++..+|..||+|+|+|.+
T Consensus 454 ~llg~-~-~~~p~~lk~eL~~tlaaf~-----~a~siw~~lE~~~~~~~v--~v~s~-----~~q~~i~~e~~eiear~c 519 (1704)
T KOG1835|consen 454 VLLGY-Q-CNIPTYLKAELLKTLAAFS-----MAFSIWFFLESCQLLETV--RVWSS-----HQQISIIVEFNEIEARVC 519 (1704)
T ss_pred hhhcc-c-cccchHHHHHHHHHHHHHH-----HHHHHHHHHHhcccceee--ecCcc-----cchhHHHHHHHHHHHHHh
Confidence 44555 4 7999999999999999999 689999999999984432 23332 345569999999999999
Q ss_pred CCcchHHHHHHHHHhhcCCCCCCCCccccchhHHHHHHhhhCCCCccccCCchhhHHHHHHHHHHHHHHHhccCCChhhh
Q 000193 666 QYPSTISFLNLLNALIAEEKDVSDRGRRFVGIFRFVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDI 745 (1885)
Q Consensus 666 ~Yp~T~aFl~Ll~~Li~~~~~~lg~g~R~~~yi~FV~~~Vf~~~~~r~Y~~~~erw~v~~~~L~~~~~~L~~y~~~~~dl 745 (1885)
.||.|++|+.|+.+ ++|.|+ +|+.++++|+|++|.|||+++..||+.|.+.|+.|.|+.+|+
T Consensus 520 ky~lTrs~lyli~s-------slgag~-----------~v~l~gy~ray~~~sekW~~~~~clq~~~~~Ls~y~~q~~d~ 581 (1704)
T KOG1835|consen 520 KYNLTRSFLYLIFS-------SLGAGP-----------SVALKGYDRAYREPSEKWQVIAQCLQSYTMLLSTYFPQLEDL 581 (1704)
T ss_pred cCccHHHHHHHHHH-------hhccCc-----------hhHHHHHHHHhhcccHhHHHHHHHHHHHHHHhcccchhhhhh
Confidence 99999999999998 567775 899999999999999999999999999999999999999886
Q ss_pred hhhhhccCCcCCCCCccccCcHHHHHHHhccChHHHHHHHHhhccChhhhhhhhcccccC-cHHHHHHHHHHHHHHHHHh
Q 000193 746 DNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIMGILQPGVDSIITERNNQIYG-PLLEKAVQLSLEIVILVFE 824 (1885)
Q Consensus 746 ~~~~~~~~~~~~~~~l~~~~P~~~vm~~~L~~~~v~~~L~~ii~~gvd~l~~~~~~~~~~-~~l~~~v~~aL~Il~~vL~ 824 (1885)
++..+ .||+.||.++...+++...+..|+..++..+ ++.. .|. +..+.+.+.|+-+....+.
T Consensus 582 ~~f~e--------------~pgf~I~~~lq~~s~liela~~im~s~v~~l-d~~~--~~q~~~~~~~~l~~~~~~~L~~~ 644 (1704)
T KOG1835|consen 582 LQFTE--------------RPGFKIDIPLQLESGLIELALIIMESSVLRL-DEYA--AFQFKEDEKSSLSKTLVLSLELA 644 (1704)
T ss_pred hcccc--------------CCccccchhhhhhhhHHHHHHHHHHHHHHHH-hhhc--cccccccccccHHHHHHHHHHhc
Confidence 55444 3666777767777777777777777766655 3222 112 3456777888888888888
Q ss_pred hhhhhhhhhcc----ccc-chhhhh------ccCchHHHHHHhhhcCCCcchhHHHHHHHHHHHhhh--HHhHHHHHhcc
Q 000193 825 KDLLLSDFWRP----LYQ-PVDVIL------SQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSR--MVGLVQLLLKY 891 (1885)
Q Consensus 825 ~q~~f~d~lrp----~~~-~l~~~L------s~~~~~I~~l~~yv~~~~~p~ial~AikIL~~ls~~--~~~l~~~l~~~ 891 (1885)
+|+.+...++. ++. ++...| .++++.|+++.+|+.++.+|.++..|+||+..++.. ...++..+...
T Consensus 645 ~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~wsadhv~ni~~y~~~g~lp~~~~~~ikil~~vs~~~~v~~Lv~~l~~~ 724 (1704)
T KOG1835|consen 645 KQNSVPILLVAAMLDLLVSALARKLKGSNPRIWSADHVLNILKYSSDGGLPMGAQAAIKILECVSCVYNVGQLVKNLITL 724 (1704)
T ss_pred cchhHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHhhhhhcCCchHhHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 88777665432 111 222211 134567999999999988999999999999999822 22466666666
Q ss_pred chhHHHHHHHHHHhcc--ccccccccccCCCChHHHHHHHHHhcCCCCCChHhhhhhccccCCCCccccccCCCCcchHH
Q 000193 892 NAASSLVEDYAACLEL--RSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFHYSCLK 969 (1885)
Q Consensus 892 ~es~~I~~~fv~~Le~--~~~~~~~~e~~~~~~k~~IL~lLl~~L~~~~PnlAHlLLGF~~~~~~~~~~l~p~~~~ScLh 969 (1885)
..+..++.+|++|++. ..++....+....+++ .|++++..+++++.||++|+|+||+...+++...+++..+++|+|
T Consensus 725 ~~~~el~~~fv~cl~~~~r~e~g~~le~~~~~lg-~I~~l~~~~~~~~~p~v~~~llg~~~~r~v~~~~lqI~~~~sCl~ 803 (1704)
T KOG1835|consen 725 LMSRELPEGFVECLEEVTRLEEGLVLEFSPRSLG-SIVQLFELNLNSLLPNVVLLLLGIDLKRAVMSNVLQIAIQYSCLN 803 (1704)
T ss_pred HHHHhhHHHHHHHHHHHhcchhHHHhhcchHHHH-HHHHHHHhhccccCcchHHHhhhcccchhhhccCcchhhHHHHHH
Confidence 7788999999999993 3333333444455666 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCchhHHHHHHHHHHHhhcCCCCCHHHHHHHhcchhhhHHHhhhhcCCCCCCCCCCchhHHHHHHHHH
Q 000193 970 IILEILEKVSKPDVNALLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQFFVKHLDAIGVAPLPKRNSNQALRISSLHQR 1049 (1885)
Q Consensus 970 sIL~lL~~~~~~~~~p~L~e~~~~lL~~Lc~~p~Ts~~~L~~LR~~~~dFf~~~L~~~~i~~~p~~~~~~~~~~s~L~~r 1049 (1885)
.++.+|++.+.++.++++.|.|+++++.||.||.|+.|+|||||+...+|+..|++..++..++ ...++-++++
T Consensus 804 ~il~mLeki~~~~~~~~~~e~~~~l~~~l~~~p~tA~p~lryL~t~~~~fll~~L~~~gf~ql~------~~~i~~lnq~ 877 (1704)
T KOG1835|consen 804 DILAMLEKIPRVSINEDLQEHNYNLFTYLCACPDTAIPILRYLSTEKAYFLLFHLVALGFDQLS------EIMISSLNQV 877 (1704)
T ss_pred HHHHHHHhCCccccchhHHHHhhhhhhhccCCccchHHHHHHHHHHHHHHHHHHHHHhCccccH------HHHhccchHH
Confidence 9999999999877889999999999999999999999999999977779999999996654433 2566889999
Q ss_pred HHHHHHHHHHHHhhcCCCchhhHH--HHHHHHHhc-----CCCCCCCCCcccccccccc--ccccccC---cccccchhh
Q 000193 1050 AWLLKLLAIELHAGYGSSSTHQEA--CQTILAHLF-----GRDHIEDTDRTLSLPFMVQ--NITEHAG---TRTISKSKV 1117 (1885)
Q Consensus 1050 s~lL~~~AlEL~~~~~~~s~~~~~--~~~ll~~L~-----g~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~i 1117 (1885)
+|+.+.+|++.+.++.+ ++.++ .......+. ..-+........ ..++. .++.+.+ .+......+
T Consensus 878 ~~l~k~~ai~~~vlsl~--~~~shl~~~~~~h~~~~~~l~d~~p~~g~~ag~--~~i~~~n~~vahl~~l~~~~~~~~~~ 953 (1704)
T KOG1835|consen 878 SWLPKLLAIALTVLSLQ--RHYSHLFPDELVHGLYAAFLRDVYPTRGERAGL--ESIRSRNSAVAHLRALLVGSCDQSIL 953 (1704)
T ss_pred HHHHHHHHHHhccchHH--HHHHhccchhhhhhhHHHHhhhhcCcccccchh--HHhhcCchHHHHHHHHHhcCchHHHH
Confidence 99999999999998632 33333 122222111 111111000000 00000 0111111 122333666
Q ss_pred hhccccccCCCCCchhhhhhhhhhcchhhHHHHHhcCCCCCCCCCceeecCCccchhcHHHHHHHHHHhhhhccccccCC
Q 000193 1118 LELLEVVQFRSPDTAMKLSQIVSNMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKLWKKLNIVYPQLSNF 1197 (1885)
Q Consensus 1118 l~lld~l~F~~~~~~~~~p~~~~~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~~~di~~l~~~L~~e~~~~~~~~~~~ 1197 (1885)
..++|+|.+... ....|+ .++|+...+.+++.+|+..+ .+|+--++..+++..|..+...+++..
T Consensus 954 ~~ildiL~~~~~--~~~~~~--l~~fdr~~l~~i~~~~e~~a--------~~~~~t~~~~~l~~~L~~~~~ll~s~~--- 1018 (1704)
T KOG1835|consen 954 TNILDILAKLSD--TENFMQ--LPNFDRNKLLQILIETESSA--------RRIDVTRNSNKLTQVLTLELYLLDSRP--- 1018 (1704)
T ss_pred HHHHHHHHHHhc--CCCccc--cCCcccchhhHHHHHhhccc--------hhhhhhhhhHHHHHHHHHHHHHHhhhh---
Confidence 677777767652 111222 47788899999999998542 233333667788888888888887652
Q ss_pred CchhhHhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccchhhHHHHHHHHHHhhhccCCCc
Q 000193 1198 GSEAELNDVKEAIQQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRR---ISALGNRSEILYQILDACLGASASPD 1274 (1885)
Q Consensus 1198 ~~~~~~~~~~~Ei~~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~---~~~~~~r~~~Il~~L~~il~ki~~~~ 1274 (1885)
+..+...+.+||..++.|.+.+|+..+...|+++++.+|.|+||++++.| ..+++.|.++++++++.++.+..+++
T Consensus 1019 -s~~~~~~~~~~i~~Ll~l~~~in~v~~~~~a~~~fl~~w~qlve~~~S~m~~~l~~~~~rs~ii~~im~~vl~~~l~i~ 1097 (1704)
T KOG1835|consen 1019 -SKAQLKELYETISVLLGLGVVINRVLQFVMAKLHFLASWSQLVESLFSLMPRLLSSITPRSKIIYDIMRSVLIAALEIS 1097 (1704)
T ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcchhHHHHHHHHHhHHHhhhhcCCcchhhHhhHHHHHhhcCch
Confidence 33455567799999999999999999999999999999999999999877 45679999999999999999988888
Q ss_pred cchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccchhhhhhcccccch----hHHHHHHHHHHHhcCCCCHHHHHHH
Q 000193 1275 CSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGA----CHSLLFKLIMAILRNESSEALRRRQ 1350 (1885)
Q Consensus 1275 ~~~~~a~~Ls~l~l~Ll~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~----~~~iL~~ll~~Il~~~ss~~lR~~l 1350 (1885)
+-...+..++++++++++++|. .+... .-..|+ ++++...-+.++... ...|+.++++ -.+++++++.|.++
T Consensus 1098 ~~lc~~p~~s~~~ls~ia~l~~-~f~~~-ai~~d~-~cft~~~i~~~~~~g~ss~l~~i~~~ll~-~~S~~~~r~~~~~l 1173 (1704)
T KOG1835|consen 1098 PFLCSAPLTSEVVLSLIAKLRG-VFAVR-AIVGDP-TCFTQVEISALSTGGHSSRLEKIVSALLR-SLSSLVSRRTQMNL 1173 (1704)
T ss_pred HHHHhhhHHHHHHHHHHHhccc-ceehh-hhcCCc-ceeeccccccCCCCCcchhHHHHHHHHHH-hhhhhHHHHHHHHH
Confidence 9999999999999999999986 21100 000111 122211111233222 3445555566 33445789999999
Q ss_pred HHHHHHHHHHhhcccCCCCchhHHHhhhcccccCcchhhhhhhhHHHHhHHHHHHHHHHhhhHHHHHHhhcccCCCcchH
Q 000193 1351 YALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDLFIKDATQGSEPGK 1430 (1885)
Q Consensus 1351 Y~~ll~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~e~LidvIc~DA~~G~~~~r 1430 (1885)
|++.++|++...+ ++-+.+....+....+++.+.+.++.+...+.+++++..+|..+|+++++++|+||++||++||
T Consensus 1174 l~s~i~y~~~a~~---~de~~~yv~sLI~~~e~~~~~el~q~~~~f~~L~~~n~~~I~~~~~~il~~~~~da~~g~~l~r 1250 (1704)
T KOG1835|consen 1174 LGSLIHYAQIAGR---SDEPLEYVASLIRNAEVPRKLELLQPEDVFSDLARLNILIIACLGENILDTFCYDALYGHELGR 1250 (1704)
T ss_pred HHhHHHHHHHhcC---CCcHHHHHHHHHHhhhccccchhcccchHHHHHHHhhhhhhccchhhhhhhhhccCccHHHHHH
Confidence 9999988887753 3345566777788877887788888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCchhHHHHHhhcCcHHHHHHHhhhhhhhcccC-CcchhhHHHHHHHHHHHHHHhhcccCcchHHHH
Q 000193 1431 TLSLYVLDALICIDHEKYFLNQLQSRGFLRSCLMNVSNVSYQDGKR-SLDTLQRACTLEAELALLLRISHKYGKSGAQVL 1509 (1885)
Q Consensus 1431 ~~Al~lLd~Lv~l~~~~~il~~L~~~g~L~~~v~sl~~~~L~~~l~-~~~~l~~L~~yea~malLlRiAq~~tr~GA~~L 1509 (1885)
|.++.|+|.++.++..+.|+..+.+ ||++.+++|+.+..+++..+ -|+.++++ +|||+|+|++|||. .+.||..|
T Consensus 1251 ml~l~~l~~i~~~~~~~~~m~~i~~-gy~~~~l~Sl~~~s~~~~~s~l~~~l~~l-~~e~~~afltria~--~~~ga~~l 1326 (1704)
T KOG1835|consen 1251 MLILYVLDEISDFQKVQKLMLGILR-GYLAEILASLSESSLESKLSPLEDQLRAL-VYEAKMAFLTRIAH--IKRGALYL 1326 (1704)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcccCchHHHHHH-HHHHHHHHHHHHHH--HhhhHHHH
Confidence 9999999999999999999999999 99999999999778888888 88999999 99999999999999 89999999
Q ss_pred HhcchHHHhhhcccccccCccccc----ccCCCccCCchhhhhhHhHHHHHHHHHHHhhhhccCCccchhHHHHHHHHHH
Q 000193 1510 FSMGSLEHIASCKAVGLQGSLRRV----ATKPRRALGGDIDRQRMIVTPMLRLVFSLTSLVDTSDFFEVKNKVVREVMDF 1585 (1885)
Q Consensus 1510 l~~~l~~~L~~~~~l~~~P~~~~~----~~~~~~~~p~~~~ry~~lL~PvlrL~~svl~~~~s~G~~~~n~~~~~qv~~F 1585 (1885)
+-.|+..+|++|.++|+.|+.... ..++..|+|...+||++++.|+|.+|..++-+. + +++++++.+|.+|
T Consensus 1327 l~~~A~~~l~~~~V~d~k~~~~~~s~fi~~~~~~~lP~i~d~~r~~l~p~l~l~s~i~~si---~--p~~~kav~~v~~f 1401 (1704)
T KOG1835|consen 1327 LILGAWGVLASCLVTDCKPEHSLVSMFITEVPGTFLPKILDRFREILLPALSLTSVILTSI---Q--PRDNKAVRDVGQF 1401 (1704)
T ss_pred HHHHHHHHHhheeEeecCCCcchHHHHHHhcccccCCcHHHHHHHHHHHHHHHHHHHHHhh---c--cchhHHHHHHHHH
Confidence 999999999999999999988642 357888999999999999999999997765554 6 8899999999999
Q ss_pred HHHHHHHHHHHHhcCcCCCChhhHHHHHHHHHHHHhccccccCCchhhHHHHHHHHHHHhhhhhhhhc-----cccC-cc
Q 000193 1586 IKGHQLLVDQVLQENISEADELTMEQINLVVGILSKVWPYEESDEYGFVQGLFGMMSSLFSSDLENLT-----FSQS-AR 1659 (1885)
Q Consensus 1586 l~~h~~lv~~vLr~~~~~~~~~~L~el~ll~~ll~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-----~~~~-~~ 1659 (1885)
+.+|++++.+++| .+.++..+++|..+++|+++++++..+.+..|++||+.-.+.++| ..+.+ .+++ ..
T Consensus 1402 ~~~h~~l~kt~lr--~~~~d~v~l~~v~ll~glis~~~s~de~d~~g~vq~l~lg~~~~f---~~s~~~~~~~~q~d~i~ 1476 (1704)
T KOG1835|consen 1402 LKTHRDLFKTLLR--KNSMDTVHLQEVALLDGLISRVESSDEIDSEGRVQRLLLGSLKLF---PKSRPAAGIGLQNDLIL 1476 (1704)
T ss_pred HHHHHHHHHHHHc--CCccchHHHHHHHHHHHHHhhccchhhhhhhhHHHHHHHHHHHHh---hccchhhhhccccCccc
Confidence 9999999999999 677899999999999999999999444445666666554444444 43311 1232 12
Q ss_pred hhhhHh--hHHHHHHHHHHHHHHHHHHHHhhccccccccc---------ccCCCCCCcccCCchhhHHHHHHHHHHHHHH
Q 000193 1660 SLENQR--KSELKKFQLCFSLSSYLYFMVTKKSLRLQVSR---------SLDDYNTNSGLQQLTLTSLGSLLNSATAVLE 1728 (1885)
Q Consensus 1660 ~~~~~~--~~~~~~~~i~~nl~~y~~~~v~~~~~~~~~~~---------~~~~~~~~~~~~~p~l~~l~~~l~~~~~~~~ 1728 (1885)
.+...+ ..++...+||.|++.||+..++++++..+... +....+-...+..+ ++..+-.+-+..+.
T Consensus 1477 ~d~~~k~~~~~~f~~~i~~~l~~~~~~~l~s~s~~~~~al~llt~~~~~v~~~l~~~~~~~~~---v~~~Ir~~~~~~i~ 1553 (1704)
T KOG1835|consen 1477 EDLKSKLLICNLFLKQIVDNLLKYCLLLLDSSSKLSTAALLLLTTVLSDVTDLLYKSNYKKAT---VLHFIRRYGTREIG 1553 (1704)
T ss_pred hhhHHhHHHHHHHHHHHhHHHHHHHHHHhhccchhHHHHHHHccccccchhhhhhHHHHHhhH---HHHHHHhhcchhHH
Confidence 222221 35566688999999999999999988774321 11111101235555 66677777777777
Q ss_pred HHHHHHHHHHHHhhhhhccChhhHHHHHhhhcccccCCCchhHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 000193 1729 RAAEEKSLLLNKIRDINELSRQEVDEVINMCVREDYVSSSDNIQKRRYVAMVEMCQVAGNRDQLITLLLLLTEHVLNVIL 1808 (1885)
Q Consensus 1729 ~~~~~~~~~~~kl~~~~~l~~~e~~el~~~~~~~~~~~~~~~~~~~r~~a~~~l~~~~~~~~~~l~~~~~i~E~~L~ilw 1808 (1885)
++..+ -++-+|.+++||+-+. .++.-|++|+++++++. ++|++++.+|.|++|+|++++|
T Consensus 1554 ~ll~q---~d~v~~i~a~l~~~~~---------------~p~~~kq~yl~~~~~~~--~n~~~l~~~~~f~~e~cl~~~w 1613 (1704)
T KOG1835|consen 1554 ELLSQ---EDAVLEILAELENVIE---------------LPKFLKQEYLKVKEVYV--NNRDALKLLVHFLAELCLKILW 1613 (1704)
T ss_pred HHHHh---hhhHHHHHhcCCCccC---------------CCcccchhhhhhHHHHH--hhHHHHHHHHHHHHHHHHHHHh
Confidence 77666 4666666677664332 23345689999999887 9999999999999999999999
Q ss_pred Hhhhhhhhhh-cccc-hhhhhcccCCCCCchhhhhhhhhhhhhHHHhhhhcc--------------------------cc
Q 000193 1809 IHFQDSSIVS-ASSE-AMRTITYGAKSDSGQDISLLSGKLIPILERLELLGE--------------------------DK 1860 (1885)
Q Consensus 1809 ~Hl~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~ 1860 (1885)
+|++++.++. +.-+ ..+.+..-.+++ .+||++++-++|-.+++ ++
T Consensus 1614 ~hl~~~~l~~~~~~~~~~~~~i~~~~~d-------~~~k~~~~~~~L~~l~~~~I~~f~e~l~~~~~d~k~~~sp~~~~~ 1686 (1704)
T KOG1835|consen 1614 IHLSLYLLASVDRLGEVSQQLISAEMED-------ETAKAIVSKDSLNLLKLLLIIDFDEDLLKLLEDAKGVYSPARRGF 1686 (1704)
T ss_pred ccchhhcchhHHHHHHHHHHHHHhhchh-------hhhhhhccHHHHHHHHHHHHHhhhHHHHHHHhcccccCCHHHHhh
Confidence 9999999954 3222 333333333322 56666666666654433 37
Q ss_pred cCchHHHHHHhhhchhH
Q 000193 1861 VGRDLKVFRRLVTSLKE 1877 (1885)
Q Consensus 1861 ~~~~~~~~~~~~~~~~~ 1877 (1885)
||+.+|.|+||+|+.+.
T Consensus 1687 vg~~vk~i~~L~~~~~~ 1703 (1704)
T KOG1835|consen 1687 VGSLVKRIRRLLTLLRP 1703 (1704)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999999998765
No 3
>KOG1835 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.96 E-value=4.2e-24 Score=280.49 Aligned_cols=947 Identities=14% Similarity=0.082 Sum_probs=515.7
Q ss_pred CCcHHHHH--HHHHHHhcCCccccccccccc----------hhHhhhcccCCCcchHHHHHHHHHHhcCCchhHHHHHHH
Q 000193 444 PLPFVSLL--EFVSEIYQKEPELLSGNDVLW----------TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGASKVYEL 511 (1885)
Q Consensus 444 ~~dle~fl--~~ia~~Y~~~p~~~~~~~~fW----------gFi~wa~~~~~~~~~~~afl~ML~sLa~~~~~A~~~~~~ 511 (1885)
..++++|. ..+-..|+..+..- +-.+| +|.+|-+++-..|.+.+.+++|-++|.-|++.|.+.|+.
T Consensus 471 ~~tlaaf~~a~siw~~lE~~~~~~--~v~v~s~~~q~~i~~e~~eiear~cky~lTrs~lyli~sslgag~~v~l~gy~r 548 (1704)
T KOG1835|consen 471 LKTLAAFSMAFSIWFFLESCQLLE--TVRVWSSHQQISIIVEFNEIEARVCKYNLTRSFLYLIFSSLGAGPSVALKGYDR 548 (1704)
T ss_pred HHHHHHHHHHHHHHHHHHhcccce--eeecCcccchhHHHHHHHHHHHHHhcCccHHHHHHHHHHhhccCchhHHHHHHH
Confidence 56677777 55555566666543 13577 588887774344666666666666888888888888877
Q ss_pred hhCCCCccccHHHHHHHHHHHHHHhhccccCCCC-----CCCC------CCcchHHHHHHHHHHHHHHHhcCcc-----c
Q 000193 512 LQGKAFRSIGWRTLFDCLSIYDEKFKQSLQTGGA-----LLPD------FQEGDAKALVAYLNVLQKVMENGNS-----I 575 (1885)
Q Consensus 512 L~~~~~~~vSW~~if~~L~~Y~~~l~~~~~~~~~-----~~~~------~~~~e~~~L~a~L~Li~~V~~~~~~-----~ 575 (1885)
.... .+-+|..++++|++|+..++.-.++..+ .+|+ ...++.....++.-+.++|.+-+.. +
T Consensus 549 ay~~--~sekW~~~~~clq~~~~~Ls~y~~q~~d~~~f~e~pgf~I~~~lq~~s~liela~~im~s~v~~ld~~~~~q~~ 626 (1704)
T KOG1835|consen 549 AYRE--PSEKWQVIAQCLQSYTMLLSTYFPQLEDLLQFTERPGFKIDIPLQLESGLIELALIIMESSVLRLDEYAAFQFK 626 (1704)
T ss_pred Hhhc--ccHhHHHHHHHHHHHHHHhcccchhhhhhhccccCCccccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccccc
Confidence 6655 5899999999999999999874332111 1222 1233444444444466677766552 1
Q ss_pred -cccccCCChHHHHHhccCCC---CChhHHHHHHHHHH-HhhhcChhhHHHHHHHHh-hcCCCcccccCCCCCCCCCCCc
Q 000193 576 -ERKNWFPDIEPLFKLLSYEN---VPPYLKGALRNAIA-ACIHVSLVMKDNIWRLLE-QYDLPVVVGTHVGNTAQPIAGQ 649 (1885)
Q Consensus 576 -e~~~w~~~i~~L~~Ll~~~~---vp~~Lka~i~~~La-al~~~s~~~a~~iW~~Ld-~~~i~~~~g~~~~~~~~~~~~~ 649 (1885)
..+.|. ..+++..+.+.+ +|..++++.++.|. ++++.-...++++|..++ -..+.... .|..+
T Consensus 627 ~~~~~~l--~~~~~~~L~~~~~~sv~~~l~~a~~~Ll~~~l~r~L~~~npr~wsadhv~ni~~y~~---~g~lp------ 695 (1704)
T KOG1835|consen 627 EDEKSSL--SKTLVLSLELAKQNSVPILLVAAMLDLLVSALARKLKGSNPRIWSADHVLNILKYSS---DGGLP------ 695 (1704)
T ss_pred ccccccH--HHHHHHHHHhccchhHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHhhhhh---cCCch------
Confidence 122343 445666555422 89999999999999 888755667899999999 33222121 11111
Q ss_pred cccHHHHHHHHhhhccCCcchHHHHHHHHHhhcCCC------------------CCCCCccc----cchhHH--------
Q 000193 650 VYDMQFELNEIEARREQYPSTISFLNLLNALIAEEK------------------DVSDRGRR----FVGIFR-------- 699 (1885)
Q Consensus 650 ~~~i~~el~~iE~~~~~Yp~T~aFl~Ll~~Li~~~~------------------~~lg~g~R----~~~yi~-------- 699 (1885)
.+...+++..+|-...|..- .+++.+.++..... ..++.++| +++|++
T Consensus 696 -~~~~~~ikil~~vs~~~~v~-~Lv~~l~~~~~~~el~~~fv~cl~~~~r~e~g~~le~~~~~lg~I~~l~~~~~~~~~p 773 (1704)
T KOG1835|consen 696 -MGAQAAIKILECVSCVYNVG-QLVKNLITLLMSRELPEGFVECLEEVTRLEEGLVLEFSPRSLGSIVQLFELNLNSLLP 773 (1704)
T ss_pred -HhHHHHHHHHHHhcccccHH-HHHHHHHHHHHHHhhHHHHHHHHHHHhcchhHHHhhcchHHHHHHHHHHHhhccccCc
Confidence 24556666666667777666 66666666443220 01344444 344433
Q ss_pred HHHHhhhCCCCccccCCchhhHHHHHHHHHHHHHHHhccCCChhhhhhhhhccCCcCCCCCccccC---c--HHHHHHHh
Q 000193 700 FVYDHVFGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQL---P--VLELLKDF 774 (1885)
Q Consensus 700 FV~~~Vf~~~~~r~Y~~~~erw~v~~~~L~~~~~~L~~y~~~~~dl~~~~~~~~~~~~~~~l~~~~---P--~~~vm~~~ 774 (1885)
.|..-+.+-..+|....+.-+-.+.-.||.-+-..|..+.-....++-... .+++++|+ | ...+|+ +
T Consensus 774 ~v~~~llg~~~~r~v~~~~lqI~~~~sCl~~il~mLeki~~~~~~~~~~e~-------~~~l~~~l~~~p~tA~p~lr-y 845 (1704)
T KOG1835|consen 774 NVVLLLLGIDLKRAVMSNVLQIAIQYSCLNDILAMLEKIPRVSINEDLQEH-------NYNLFTYLCACPDTAIPILR-Y 845 (1704)
T ss_pred chHHHhhhcccchhhhccCcchhhHHHHHHHHHHHHHhCCccccchhHHHH-------hhhhhhhccCCccchHHHHH-H
Confidence 232222222334444444445666777888777777777542111110000 04466666 6 666888 9
Q ss_pred ccChHHHHHHHHhhccChhhhhhhhcccccCcHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccch--------------
Q 000193 775 MSGKAVFRNIMGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPV-------------- 840 (1885)
Q Consensus 775 L~~~~v~~~L~~ii~~gvd~l~~~~~~~~~~~~l~~~v~~aL~Il~~vL~~q~~f~d~lrp~~~~l-------------- 840 (1885)
++.++.+..+++....|++.+.+.... +.+....+...+.|...++++|..|.+ +.|.+...
T Consensus 846 L~t~~~~fll~~L~~~gf~ql~~~~i~---~lnq~~~l~k~~ai~~~vlsl~~~~sh-l~~~~~~h~~~~~~l~d~~p~~ 921 (1704)
T KOG1835|consen 846 LSTEKAYFLLFHLVALGFDQLSEIMIS---SLNQVSWLPKLLAIALTVLSLQRHYSH-LFPDELVHGLYAAFLRDVYPTR 921 (1704)
T ss_pred HHHHHHHHHHHHHHHhCccccHHHHhc---cchHHHHHHHHHHHHhccchHHHHHHh-ccchhhhhhhHHHHhhhhcCcc
Confidence 999999999999999999998443331 345566777888888999998885543 33321111
Q ss_pred -----hhhhccCchHHHHHH-hhhcCCCcchhHHHHHHHHHHHhhhHH----------hHHHHHhccchhHHHHH-HHHH
Q 000193 841 -----DVILSQDHNQIVALL-EYVRYDFLPQIQQCSIKIMSILSSRMV----------GLVQLLLKYNAASSLVE-DYAA 903 (1885)
Q Consensus 841 -----~~~Ls~~~~~I~~l~-~yv~~~~~p~ial~AikIL~~ls~~~~----------~l~~~l~~~~es~~I~~-~fv~ 903 (1885)
...+..+.+.|+|++ .+++..+ ..+...++.||.+.+.+-+ .+.+++.+..++++..+ ++..
T Consensus 922 g~~ag~~~i~~~n~~vahl~~l~~~~~~-~~~~~~ildiL~~~~~~~~~~~l~~fdr~~l~~i~~~~e~~a~~~~~t~~~ 1000 (1704)
T KOG1835|consen 922 GERAGLESIRSRNSAVAHLRALLVGSCD-QSILTNILDILAKLSDTENFMQLPNFDRNKLLQILIETESSARRIDVTRNS 1000 (1704)
T ss_pred cccchhHHhhcCchHHHHHHHHHhcCch-HHHHHHHHHHHHHHhcCCCccccCCcccchhhHHHHHhhccchhhhhhhhh
Confidence 112234668899999 9999988 5888889999998873211 15555544444433333 2211
Q ss_pred HhccccccccccccCCCChHHHHHHHHHhcCCCC--CChHhhhh-hccccCCCCccccccC------CCCcchHHHHHHH
Q 000193 904 CLELRSEESQIIEKSGDDPGVLIMQLLIDNISRP--APNITHLL-LKFDLDTPIERTVLQP------KFHYSCLKIILEI 974 (1885)
Q Consensus 904 ~Le~~~~~~~~~e~~~~~~k~~IL~lLl~~L~~~--~PnlAHlL-LGF~~~~~~~~~~l~p------~~~~ScLhsIL~l 974 (1885)
...... ...++..++++..+...+ .-++.|+| +||.+.+- ....+ .+-+.++.+++..
T Consensus 1001 ~~l~~~----------L~~~~~ll~s~~s~~~~~~~~~~i~~Ll~l~~~in~v---~~~~~a~~~fl~~w~qlve~~~S~ 1067 (1704)
T KOG1835|consen 1001 NKLTQV----------LTLELYLLDSRPSKAQLKELYETISVLLGLGVVINRV---LQFVMAKLHFLASWSQLVESLFSL 1067 (1704)
T ss_pred HHHHHH----------HHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHH---HHhhhhhHHHhcchhHHHHHHHHH
Confidence 111110 112333344444333211 23567777 77766541 11111 1224566666666
Q ss_pred HHhcCC---CCC----ch--hHHHHHHHHHHHhhcCCCCCHHHHHHHhcchhh-hHHHhhhhcC-CCCCCCCC------C
Q 000193 975 LEKVSK---PDV----NA--LLHEFGFQLLYELCLDPLTCGPTMDLLSNKKYQ-FFVKHLDAIG-VAPLPKRN------S 1037 (1885)
Q Consensus 975 L~~~~~---~~~----~p--~L~e~~~~lL~~Lc~~p~Ts~~~L~~LR~~~~d-Ff~~~L~~~~-i~~~p~~~------~ 1037 (1885)
+..... ++. .+ ...-+++++.-.||.+|.||+.++.+++..+ + |+.+.+..+| | ++.|. +
T Consensus 1068 m~~~l~~~~~rs~ii~~im~~vl~~~l~i~~~lc~~p~~s~~~ls~ia~l~-~~f~~~ai~~d~~c--ft~~~i~~~~~~ 1144 (1704)
T KOG1835|consen 1068 MPRLLSSITPRSKIIYDIMRSVLIAALEISPFLCSAPLTSEVVLSLIAKLR-GVFAVRAIVGDPTC--FTQVEISALSTG 1144 (1704)
T ss_pred hHHHhhhhcCCcchhhHhhHHHHHhhcCchHHHHhhhHHHHHHHHHHHhcc-cceehhhhcCCcce--eeccccccCCCC
Confidence 665332 111 11 2257889999999999999999999999876 4 7777776666 2 33333 2
Q ss_pred c-hh----------HHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHhcCCCCCCCCCccccccccccccccc
Q 000193 1038 N-QA----------LRISSLHQRAWLLKLLAIELHAGYGSSSTHQEACQTILAHLFGRDHIEDTDRTLSLPFMVQNITEH 1106 (1885)
Q Consensus 1038 ~-~~----------~~~s~L~~rs~lL~~~AlEL~~~~~~~s~~~~~~~~ll~~L~g~~~~~~~~~~~~~~~~~~~~~~~ 1106 (1885)
+ .+ ...+++..|...+++.+.++|.+... ++.+....|+..|+.+....-.-
T Consensus 1145 g~ss~l~~i~~~ll~~~S~~~~r~~~~~ll~s~i~y~~~a--~~~de~~~yv~sLI~~~e~~~~~--------------- 1207 (1704)
T KOG1835|consen 1145 GHSSRLEKIVSALLRSLSSLVSRRTQMNLLGSLIHYAQIA--GRSDEPLEYVASLIRNAEVPRKL--------------- 1207 (1704)
T ss_pred CcchhHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHh--cCCCcHHHHHHHHHHhhhccccc---------------
Confidence 2 11 11367779999999999999998542 34556678888888333111000
Q ss_pred cCcccccchhhhhccccccCCCCCchhh-hhhhh-h-hcchhhHHHHHhcCCCCCCCCCceeecCCccchhcHHHHHHHH
Q 000193 1107 AGTRTISKSKVLELLEVVQFRSPDTAMK-LSQIV-S-NMKYDLLAEEILGNPTTSGKGGIYYYSERGDRLIDLSSFSDKL 1183 (1885)
Q Consensus 1107 ~~~~~~~~~~il~lld~l~F~~~~~~~~-~p~~~-~-~~~~~~~~~~~~~~c~~~~~g~~~~~~~~g~~~~di~~l~~~L 1183 (1885)
.-..+...+..|+.+|+...+.... .-+.+ . .....-....+...|. ++++.++. ...-+..+.+.-
T Consensus 1208 ---el~q~~~~f~~L~~~n~~~I~~~~~~il~~~~~da~~g~~l~rml~l~~l----~~i~~~~~---~~~~m~~i~~gy 1277 (1704)
T KOG1835|consen 1208 ---ELLQPEDVFSDLARLNILIIACLGENILDTFCYDALYGHELGRMLILYVL----DEISDFQK---VQKLMLGILRGY 1277 (1704)
T ss_pred ---hhcccchHHHHHHHhhhhhhccchhhhhhhhhccCccHHHHHHHHHHHHH----hcchhHHH---HHHHHHHHHHHH
Confidence 0113345566666666655432221 00000 0 0000000011111221 11111111 000011222211
Q ss_pred HHh-hhhccccccCCCchhhHh----HHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHH
Q 000193 1184 WKK-LNIVYPQLSNFGSEAELN----DVKEAI-QQLLRWGWKYNKNLEEQAAQLHMLTGWSQVVEVSVSRRISALGNRSE 1257 (1885)
Q Consensus 1184 ~~e-~~~~~~~~~~~~~~~~~~----~~~~Ei-~~il~~~~~~N~~~~~~~a~l~~L~aW~qLv~V~~s~~~~~~~~r~~ 1257 (1885)
+++ ...+.. ++.+++. ....+. -+-...+..++++...-+.-+-++.||.++.+..|++|......+..
T Consensus 1278 ~~~~l~Sl~~-----~s~~~~~s~l~~~l~~l~~e~~~afltria~~~~ga~~ll~~~A~~~l~~~~V~d~k~~~~~~s~ 1352 (1704)
T KOG1835|consen 1278 LAEILASLSE-----SSLESKLSPLEDQLRALVYEAKMAFLTRIAHIKRGALYLLILGAWGVLASCLVTDCKPEHSLVSM 1352 (1704)
T ss_pred HHHHHhhhhh-----hhhhhcccCchHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhheeEeecCCCcchHHH
Confidence 111 111110 0111111 111222 44455666677776666667778999999999999999888877899
Q ss_pred HHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccchhhhhhcccccchhHHHHHHHHHHH
Q 000193 1258 ILYQILDACLGASASPDCSLRMAFILCQVALTCMAKLRDEKFLCPGGLNSDSVTFLDVIMVKQLSNGACHSLLFKLIMAI 1337 (1885)
Q Consensus 1258 ~Il~~L~~il~ki~~~~~~~~~a~~Ls~l~l~Ll~~Lr~~~~~~~~~~~~~~~~~~d~~~~~~L~~~~~~~iL~~ll~~I 1337 (1885)
+|.+..+..+|++.+. ...-+...++-+.+.+.+..-++. ....|++. +. .+...+++.+++
T Consensus 1353 fi~~~~~~~lP~i~d~-~r~~l~p~l~l~s~i~~si~p~~~-----------kav~~v~~---f~-~~h~~l~kt~lr-- 1414 (1704)
T KOG1835|consen 1353 FITEVPGTFLPKILDR-FREILLPALSLTSVILTSIQPRDN-----------KAVRDVGQ---FL-KTHRDLFKTLLR-- 1414 (1704)
T ss_pred HHHhcccccCCcHHHH-HHHHHHHHHHHHHHHHHhhccchh-----------HHHHHHHH---HH-HHHHHHHHHHHc--
Confidence 9999999999997652 233444444433333322222210 11122110 00 011122222244
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhcccCCCCchhHHHhhhcccccCcchhhhhhhhHHHHhHHHHHHHHHHhhhHHHHH
Q 000193 1338 LRNESSEALRRRQYALLLSYFQYCQHMLAPDVPTTVLQYLLLDEQDGEDLDLQKIDKEQAELTHANFSTLRKEAQAILDL 1417 (1885)
Q Consensus 1338 l~~~ss~~lR~~lY~~ll~yLq~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~e~Lidv 1417 (1885)
..+-++..++...|..- |++-+.. .++ .++++ ..++.-.- .-+++..
T Consensus 1415 ~~~~d~v~l~~v~ll~g--lis~~~s------~de---------~d~~g-----------~vq~l~lg-----~~~~f~~ 1461 (1704)
T KOG1835|consen 1415 KNSMDTVHLQEVALLDG--LISRVES------SDE---------IDSEG-----------RVQRLLLG-----SLKLFPK 1461 (1704)
T ss_pred CCccchHHHHHHHHHHH--HHhhccc------hhh---------hhhhh-----------HHHHHHHH-----HHHHhhc
Confidence 22235567777766554 2222211 010 01110 11111111 1223333
Q ss_pred HhhcccCCCcchHHHHHHHHHHHHhccCchhHHHHHhhcCcH---HHHH-----HHhhhh-hhh---cccC-CcchhhHH
Q 000193 1418 FIKDATQGSEPGKTLSLYVLDALICIDHEKYFLNQLQSRGFL---RSCL-----MNVSNV-SYQ---DGKR-SLDTLQRA 1484 (1885)
Q Consensus 1418 Ic~DA~~G~~~~r~~Al~lLd~Lv~l~~~~~il~~L~~~g~L---~~~v-----~sl~~~-~L~---~~l~-~~~~l~~L 1484 (1885)
.-++|..|.....+.. |.-. ....++++.+.++- +.+. ++-..+ .+. ..+. ..+.++..
T Consensus 1462 s~~~~~~~~q~d~i~~----d~~~----k~~~~~~f~~~i~~~l~~~~~~~l~s~s~~~~~al~llt~~~~~v~~~l~~~ 1533 (1704)
T KOG1835|consen 1462 SRPAAGIGLQNDLILE----DLKS----KLLICNLFLKQIVDNLLKYCLLLLDSSSKLSTAALLLLTTVLSDVTDLLYKS 1533 (1704)
T ss_pred cchhhhhccccCccch----hhHH----hHHHHHHHHHHHhHHHHHHHHHHhhccchhHHHHHHHccccccchhhhhhHH
Confidence 3344444444443111 1000 01122222221111 1111 111111 111 1122 34788999
Q ss_pred HHHHHHHHHHHHhhcccCcchHHHHHh-cchHHHhhhcccccccCc
Q 000193 1485 CTLEAELALLLRISHKYGKSGAQVLFS-MGSLEHIASCKAVGLQGS 1529 (1885)
Q Consensus 1485 ~~yea~malLlRiAq~~tr~GA~~Ll~-~~l~~~L~~~~~l~~~P~ 1529 (1885)
+..++.+..++|... |+.++..|.+ ..++++++++.++...|.
T Consensus 1534 ~~~~~~v~~~Ir~~~--~~~i~~ll~q~d~v~~i~a~l~~~~~~p~ 1577 (1704)
T KOG1835|consen 1534 NYKKATVLHFIRRYG--TREIGELLSQEDAVLEILAELENVIELPK 1577 (1704)
T ss_pred HHHhhHHHHHHHhhc--chhHHHHHHhhhhHHHHHhcCCCccCCCc
Confidence 999999999999999 8999999999 899999999999999985
No 4
>PF10487 Nup188: Nucleoporin subcomplex protein binding to Pom34; InterPro: IPR018864 This is one of the many peptides that make up the nucleoporin complex (NPC), and is found across eukaryotes []. The Nup188 subcomplex (Nic96p-Nup188p-Nup192p-Pom152p) is one of at least six that make up the NPC, and as such is symmetrically localised on both faces of the NPC at the nuclear end, being integrally bound to the C terminus of Pom34p [].
Probab=99.88 E-value=1.1e-18 Score=234.21 Aligned_cols=796 Identities=18% Similarity=0.234 Sum_probs=452.0
Q ss_pred HHHHHHHHHhHHHHHh-cccCCCCChhhhhhhhcCceEcCCCCccccC--HHHHHHHHHHhhhcCCCHHHHHHHHHhhcc
Q 000193 27 IELIHAIHNSLSSFKS-LLSYPPPKPSDRAQVQSREVRLPDSPPISLD--DQDVQIALKLSDDLHLNEVDCVRLLVSANQ 103 (1885)
Q Consensus 27 ~~l~~~L~~~~~df~~-ll~~ppkn~~sR~~l~sg~V~l~~~~~~~ln--~~fi~~al~LSD~ldLdEi~a~eLL~~a~~ 103 (1885)
..+.+.|.++++.|.+ ++.+.++|.+|-.+.+.+++.+.+.-.+.+. +-+...+.++|..|++|=.++.+-......
T Consensus 4 ~~i~~fL~~~~~~Ll~~~~~f~~~~~~s~~~~k~k~~~~~~~~~~~i~~~~~~~~d~~~~~~~L~l~l~E~~R~i~q~~~ 83 (931)
T PF10487_consen 4 DAIDEFLLLNKKRLLDGLSPFKNPSTSSADKKKTKEIILRGLLYFNITDSNFLDLDAEQLSELLCLYLKECLRGISQTLK 83 (931)
T ss_pred HHHHHHHHHCHHHHhcccccCCCCCCccccccchhHHHHHHHHhcCCCcchhccccHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3466799999999998 8888888888877666555555443223233 333666666777777777777766644322
Q ss_pred cccccCCChhhhh--hhHhhHhHHhhHH-HHHHHHHHHHhh-hcccCcchHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Q 000193 104 ECGLMGRDPIEIL--RLASGLWYTERRD-LITALYILFRAV-VLDQGLEEDIVVDIQKYLEDLVNTGLRQRLISLMKELN 179 (1885)
Q Consensus 104 ~~~~~~~~~~~l~--r~a~~lyy~~Rr~-ll~~Lr~Ll~~~-~~~~~l~~~~~~~v~~~~~~l~~~~l~~~il~~l~~l~ 179 (1885)
..+...+.-.-+. .. .-.|+++|-+ +|+++..++... +.....+++..+.+.+ +. ..++....+.++++-
T Consensus 84 ~~~~~~~~~~~l~~L~~-~~~~~~eR~~~vL~~vl~ll~~~~~~~~~~~~~~~~~v~~----l~-~~l~~~~~~~~~~li 157 (931)
T PF10487_consen 84 RILKDESQSQALKKLDI-ADYYDNERLSNVLREVLKLLNEFLDNKHPYNAEYSSVVEN----LG-KELFLSYISYLESLI 157 (931)
T ss_pred hhCCCHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHH----HH-HHHHHHHHHHHHHHH
Confidence 2111100000000 11 2358888886 888888777764 2223334444433333 32 345556566666654
Q ss_pred c-cccC--CCCCcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hccCChhhHHHHHHHHHhhhhh-
Q 000193 180 R-EEPT--GLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVL--------VVRTSPKDVKDAFSALKDSAAE- 247 (1885)
Q Consensus 180 ~-~~~~--~lg~~~~~~~v~d~~~~L~~~~e~~~~e~~~L~~~lil~~~--------~~~~~~~d~~~ll~~lk~~~~~- 247 (1885)
. +.+. ..|+.-.+..+.+ ..+ +..++...|.+.++++.. |....|.++..+++.+|+.+-.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~ll~i~~l~~~~~~~~v~~wf~~~~~el~~~~~l~~~~~f~~ 230 (931)
T PF10487_consen 158 SSEAPTWETHGDELTELKYSE--WLL-----FCLRELKELLEILFLNSNVPKSIVSKWFEMSPNELVRLFKLMKSTNFGG 230 (931)
T ss_pred HhccchhhhhhhHHHHHHHHH--HHH-----HHHHHHHHHHHHHHhcccCCccHHHHHhhcccchhHHHHHHHHhcCCcc
Confidence 2 2221 2344333222222 111 224456657777777776 4456677777788877765321
Q ss_pred -------ccCCCCchhHHHHHHHHHHHH-HHHHhhcc---C-CCCCCCccccCCHHHHHHHHHHHhcCCCCCccchHHHH
Q 000193 248 -------LSENNDTLKHQITFSLLFSLV-IAFISDAL---S-TVPDKSSVLSRDASFRKEFHEIVMATGSDPIVEGFVGG 315 (1885)
Q Consensus 248 -------~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~---~-~~~~~~~~~~~d~~~~~~lh~~i~~~~~~w~~~~~~a~ 315 (1885)
.+.....++-. ...+..++ +.++. .. + ...+...+++.|++..+++|+.+++.. +.+++
T Consensus 231 ~~~~~~~~~e~~~~l~~~--i~~l~~visl~~ld-L~~~~~~~~~~~~~~~~~d~~~~~~i~~~i~~~~------~~~~p 301 (931)
T PF10487_consen 231 RFQSRHDSSESHSELIER--IQSLFSVISLEFLD-LDNSFDSALIDSSEPYFNDPEVFKEINDAILNDS------PENSP 301 (931)
T ss_pred hhhhhhcchhhHHHHHHH--HHHHHHHHHHHHhC-cchhhccccCCCccchhcCcHHHHHHHHHHhcCC------CCCch
Confidence 01111111111 11122222 22222 11 0 111233478889999999999998732 33489
Q ss_pred HHHHHHHHHHhhhchhhhhcccCCCchhHHHhHHHHHHHHHhCChHHHHHHHHhcccCCCCCchHHHHHHHHHHHHHHHH
Q 000193 316 VRLAWAVHLMLIHDEIAARETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMVYMNNAYLHKLITC 395 (1885)
Q Consensus 316 i~law~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~al~~~vf~fl~~~ll~~~~~~~~~~~~~~~~~~~~h~li~~ 395 (1885)
+.++|.+.+..-.-.-.. ...+ ..+-..-+..+...|.+.|||+.|.... +...+ |. .+...+ +.
T Consensus 302 vl~aWs~il~~k~~~~~e-~~~~--~~~~~~~i~~~~~~a~~l~Vf~~l~~l~-~~l~~---d~----~~~ail----s~ 366 (931)
T PF10487_consen 302 VLYAWSIILHRKSYLLEE-DPFN--DEDVSSVIRQLASRAEQLNVFEYLSRLS-ESLSF---DS----IYSAIL----SS 366 (931)
T ss_pred HHHHHHHHHHHHHHHhhh-cCCC--cccHHHHHHHHHHHHhhcCHHHHHHHHH-Hhccc---ch----HHHHHH----HH
Confidence 999999988772111000 0011 1111344556678999999999999663 32211 11 344333 33
Q ss_pred Hhhh--hhhHhHHHHhhhhHHhhhhhhhhcCCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhcCCccccc---cccc
Q 000193 396 FLSH--QLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEPELLS---GNDV 470 (1885)
Q Consensus 396 fIs~--p~~~~klkelr~~~d~~l~~~R~~~~~~feed~~~~~~~~~~~~~~dle~fl~~ia~~Y~~~p~~~~---~~~~ 470 (1885)
|+.- |++. | . ..+..++..++.+-|+... ...+
T Consensus 367 ~~~~s~~~v~------------------------~-------t-----------~~~~~~i~~vl~~~p~~~~e~fl~n~ 404 (931)
T PF10487_consen 367 FITLSLPFVP------------------------L-------T-----------PETSSCIKSVLSAAPNVLVEKFLTNE 404 (931)
T ss_pred HHHHhcceee------------------------e-------c-----------HHHHHHHHHHHHhchHhhhccccccH
Confidence 3332 2221 0 0 1234567777766664321 2355
Q ss_pred cc-hhHhhhcccCCCcchHHHHHHHHHHhcCCchhH---HHHHHHhhCCCC-----------------------------
Q 000193 471 LW-TFVVFAGEDHTNFQTLVAFLKMLSTLASSQEGA---SKVYELLQGKAF----------------------------- 517 (1885)
Q Consensus 471 fW-gFi~wa~~~~~~~~~~~afl~ML~sLa~~~~~A---~~~~~~L~~~~~----------------------------- 517 (1885)
+| ..+..|..+. |..+.||+.+ ++..++.+. ..++.|+.....
T Consensus 405 ~~~~~~~~ararf--P~e~~P~l~L--a~i~~~~a~~e~~~l~s~~~~~~~~~~~Y~~~~~~~~~~en~~li~l~~~~~~ 480 (931)
T PF10487_consen 405 FFENEFDIARARF--PYELLPFLKL--ALISGEFANFELKELKSYTQKLPEFFQDYDLIDEDIIEDENTDLIKLTQDLLL 480 (931)
T ss_pred HHHHHHHHHHHhC--CHhHHHHHHH--HHcCcchhHHHHHHHHHHHHhCCCcccccccccccccccCCcchhhccccccc
Confidence 56 2555565553 5569999998 445554432 355555532111
Q ss_pred ---------------------------c---cccHHHHHHHHHHHHHHhhccccCCCCCCCCCCcchHHHHHHHHHHHHH
Q 000193 518 ---------------------------R---SIGWRTLFDCLSIYDEKFKQSLQTGGALLPDFQEGDAKALVAYLNVLQK 567 (1885)
Q Consensus 518 ---------------------------~---~vSW~~if~~L~~Y~~~l~~~~~~~~~~~~~~~~~e~~~L~a~L~Li~~ 567 (1885)
+ .|.|.|=+..+.+.-.-+.+-... ..++.....+.+...+.|++.
T Consensus 481 ~p~~e~~~~~~~~IP~gT~G~iv~~~~~~~~vV~w~~~ysgw~lLG~~Le~~~~~----~~~~d~~~~~~v~~ii~Ll~~ 556 (931)
T PF10487_consen 481 YPPFEQSNKISLVIPAGTKGKIVSDSGPDEVVVMWEYEYSGWALLGRWLENLLKS----YSELDSLQDERVAEIIDLLAS 556 (931)
T ss_pred CCCCCCCCCeeEEeCCCCEEEEEeCCCCCceEEEEeecchHHHHHHHHHHHHHhc----ccccCcchHHHHHHHHHHHHH
Confidence 1 244443222222211111110000 012334455888999999999
Q ss_pred HHhcCcccccc--------cc---CCChHHHHHhcc--CCCCChhHHHHHHHHHHHhhhcChhhHHHHHHHHhhcCCCcc
Q 000193 568 VMENGNSIERK--------NW---FPDIEPLFKLLS--YENVPPYLKGALRNAIAACIHVSLVMKDNIWRLLEQYDLPVV 634 (1885)
Q Consensus 568 V~~~~~~~e~~--------~w---~~~i~~L~~Ll~--~~~vp~~Lka~i~~~Laal~~~s~~~a~~iW~~Ld~~~i~~~ 634 (1885)
|++.+...+.. .. ..++.+.|.++. ...-|..+..+|+++|+|+++. .+.+||.+|-+++++..
T Consensus 557 l~~~~~~~~~~~~iL~~~S~~l~~~DIisvI~~ile~~L~~~~v~ll~scl~fL~aL~p~---~p~rVW~~L~rS~LL~~ 633 (931)
T PF10487_consen 557 LLSSDNSIEDSKEILEEASAYLDHSDIISVIFDILERSLQSRNVELLTSCLRFLTALLPI---FPGRVWSYLSRSSLLGS 633 (931)
T ss_pred HHccCcchhHHHHHHHHHhhccccCcHHHHHHHHHHHHcccCChHHHHHHHHHHHHHhcc---ChHHHHHHHhhCcCccc
Confidence 99544321111 01 135777777652 2346899999999999999984 56899999999986422
Q ss_pred cccCCCCCCCCCCCccccHH-HHHHHHhhhccCCcchHHHHHHHHHhhcCCCC-CCCCccc----cchhHHHHHHhhhCC
Q 000193 635 VGTHVGNTAQPIAGQVYDMQ-FELNEIEARREQYPSTISFLNLLNALIAEEKD-VSDRGRR----FVGIFRFVYDHVFGP 708 (1885)
Q Consensus 635 ~g~~~~~~~~~~~~~~~~i~-~el~~iE~~~~~Yp~T~aFl~Ll~~Li~~~~~-~lg~g~R----~~~yi~FV~~~Vf~~ 708 (1885)
.|+ .|.. ..+-.+|...|.|+-|+++++|..+|+..... ..|...+ +-+-+.|++-+||-+
T Consensus 634 ----~g~---------~G~~s~ilgs~E~~~G~Y~ftls~lkL~~~Lv~~als~~~~~~~~~~~~vL~~~~~~l~eVfes 700 (931)
T PF10487_consen 634 ----DGK---------GGLASVILGSIEMVSGRYDFTLSLLKLFSALVDDALSSNSGVPSKTKSVVLPKIVFHLVEVFES 700 (931)
T ss_pred ----CCc---------cchHHHhhhhhhccCCcchHHHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHHHHHHHhhc
Confidence 111 1222 22336788899999999999999999975422 1111111 333467888999999
Q ss_pred CCccccCCchhhHHHHHHHHHHHHHHHhccCCChhhhhhhhhccCCcCCCCCccccCcHHHHHHHhccC----hHHHHHH
Q 000193 709 FPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSG----KAVFRNI 784 (1885)
Q Consensus 709 ~~~r~Y~~~~erw~v~~~~L~~~~~~L~~y~~~~~dl~~~~~~~~~~~~~~~l~~~~P~~~vm~~~L~~----~~v~~~L 784 (1885)
+.+|+|+++.+|++++..|+++|+++|..... .+ +.+.+........ ..++..|++.++.. ......|
T Consensus 701 ~~~Wrf~~~~qR~eIg~~i~~~f~~IL~~~yg-i~------~~~~~~~klt~vl-~~aa~~il~~fl~~~s~~~~~~~pl 772 (931)
T PF10487_consen 701 FSTWRFNSPGQRFEIGRSILSIFSKILYYVYG-ID------EDSSPDSKLTSVL-APAAQYILDSFLSPSSSSQRAMNPL 772 (931)
T ss_pred CCceeCCChhhHHHHHHHHHHHHHHHHHHhcC-CC------CCCCcchhhHHhh-hHHHHHHHHHHccCCCchhhcchHH
Confidence 99999999999999999999999999866422 11 0011100000000 01344455555532 2233444
Q ss_pred HHhhccChhhhhhhhcccccCcHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccchhhhhccCc-hHHHHHHhhhcCCCc
Q 000193 785 MGILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDH-NQIVALLEYVRYDFL 863 (1885)
Q Consensus 785 ~~ii~~gvd~l~~~~~~~~~~~~l~~~v~~aL~Il~~vL~~q~~f~d~lrp~~~~l~~~Ls~~~-~~I~~l~~yv~~~~~ 863 (1885)
++++..|-..-..... +.++..+...+..+|++.+.++..... .+.+.| +.+++.|..+. ..|..++.| +..
T Consensus 773 l~~l~~~~~~~~~~~~-~~~~~~~~~~v~~sl~~~~~Ll~~r~~-~~~l~P--S~LE~~Lf~~s~~Lv~~~a~~---~~~ 845 (931)
T PF10487_consen 773 LSILTSGLNTPLSSLG-DRSGQLLSRLVQSSLSFATLLLRIRSY-LNLLPP--SALEKQLFKASPDLVDLYASY---PSL 845 (931)
T ss_pred HHHHhcccccchhhhh-hhHHHHHHHHHHHHHHHHHHHHHHhhh-ccCCCc--hHHHHHHHhcchHHHHHHhcc---cch
Confidence 4444332211101100 112457888999999999999987543 344567 66888887554 444444433 443
Q ss_pred chhHHHHHHHHHHHhh-h----HHhHHHHHhccchhHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHhcCCCCC
Q 000193 864 PQIQQCSIKIMSILSS-R----MVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPA 938 (1885)
Q Consensus 864 p~ial~AikIL~~ls~-~----~~~l~~~l~~~~es~~I~~~fv~~Le~~~~~~~~~e~~~~~~k~~IL~lLl~~L~~~~ 938 (1885)
+..+...+++|..+.+ . .|.+++.|.. ..|..++..|++.|+.++++ ..+|.+|++|+...+. .+
T Consensus 846 ~~~~~~il~lL~sl~~~~~~~e~PSLL~~LG~-~~s~~fl~~ll~~L~~p~~d--------~~l~~aIw~F~saiv~-~~ 915 (931)
T PF10487_consen 846 PRLRVPILELLTSLVSADWSSEPPSLLGHLGS-EHSKSFLDSLLSDLDNPFED--------YNLKVAIWEFFSAIVE-KQ 915 (931)
T ss_pred hhHHHHHHHHHHHHhcCccCCCCCcHHHHcCC-hhHHHHHHHHHHHhCCccCC--------HHHHHHHHHHHHHHHc-cC
Confidence 5566667777776652 2 2569998855 34677888899999876533 3689999999999995 55
Q ss_pred C-hHhhhhhcccc
Q 000193 939 P-NITHLLLKFDL 950 (1885)
Q Consensus 939 P-nlAHlLLGF~~ 950 (1885)
| .+|.+||..+.
T Consensus 916 QqgLa~lfLTG~~ 928 (931)
T PF10487_consen 916 QQGLAILFLTGKT 928 (931)
T ss_pred hhHHHHHHhcCCC
Confidence 5 99999997654
No 5
>KOG4833 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.30 E-value=2.1e-10 Score=131.63 Aligned_cols=371 Identities=18% Similarity=0.129 Sum_probs=219.3
Q ss_pred HHHhhhcCCCHHHHHHHHHhh-cccccccCCChhhhhh----------hHhhHhHHhhHHHHHHHHHHHHhhhcccCcch
Q 000193 81 LKLSDDLHLNEVDCVRLLVSA-NQECGLMGRDPIEILR----------LASGLWYTERRDLITALYILFRAVVLDQGLEE 149 (1885)
Q Consensus 81 l~LSD~ldLdEi~a~eLL~~a-~~~~~~~~~~~~~l~r----------~a~~lyy~~Rr~ll~~Lr~Ll~~~~~~~~l~~ 149 (1885)
+.++..++|||.+++.|+... |++....+.+..+++. .-+-.||.+|-|++-||-.|+..-+ ++-.|
T Consensus 3 leikkdlgLDEeQSviLlecsleedYggTddsakellQdeidmqafihiiacfvveeesCeafcllhLLsffq--derhp 80 (573)
T KOG4833|consen 3 LEIKKDLGLDEEQSVILLECSLEEDYGGTDDSAKELLQDEIDMQAFIHIIACFVVEEESCEAFCLLHLLSFFQ--DERHP 80 (573)
T ss_pred ccccccCCCchhhhHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHhhheEEehHhHHHHHHHHHHHHhc--ccCCc
Confidence 457889999999999999886 5565555444333322 3346788999999999999988762 11112
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHhcc-c--ccCCCCCcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000193 150 DIVVDIQKYLEDLVNTGLRQRLISLMKELNR-E--EPTGLGGPLCERYVLDSRGALVERRAVVYRERLILGHCLVLSVLV 226 (1885)
Q Consensus 150 ~~~~~v~~~~~~l~~~~l~~~il~~l~~l~~-~--~~~~lg~~~~~~~v~d~~~~L~~~~e~~~~e~~~L~~~lil~~~~ 226 (1885)
-.. .-+..++.+ ...+++|.-..+.+.-. + .++.-|+...+.+|.-.+.. .++|+.+|.|.+++++..
T Consensus 81 vil-EdaacVdhl-akeltkkYkaqfeeciiceapapeeegnlikEeaVklifdg-------ceReQSmlLEdiflscap 151 (573)
T KOG4833|consen 81 VIL-EDAACVDHL-AKELTKKYKAQFEECIICEAPAPEEEGNLIKEEAVKLIFDG-------CEREQSMLLEDIFLSCAP 151 (573)
T ss_pred eEe-echHHHhhh-chhhHHHHHHHhhhheeecCCCchhhcchhhHHHHHHHHHH-------HHHHHHHHHHHHHHhhhh
Confidence 111 111222222 22345565556665432 2 23345544444444442211 246788899988888877
Q ss_pred ccCChhhHHHHHHHHHhhhhhccCCCCchhHHHHHHHHHHHHH-HHHhhccCCCCC-CCccccCCHHHHHHHHHHHhcCC
Q 000193 227 VRTSPKDVKDAFSALKDSAAELSENNDTLKHQITFSLLFSLVI-AFISDALSTVPD-KSSVLSRDASFRKEFHEIVMATG 304 (1885)
Q Consensus 227 ~~~~~~d~~~ll~~lk~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~-~~~~~~~d~~~~~~lh~~i~~~~ 304 (1885)
+.+.+-|-.-+.+.++.. .++..+........+|++.--++. .+++-.-.+++. .+...++ .-+.++....+..-
T Consensus 152 feMaildglvlfkkfaeq-geaqhqacRhlidelmildeflDmeglfqalhdgegfdieschfc-alDdqeedaqfaqd- 228 (573)
T KOG4833|consen 152 FEMAILDGLVLFKKFAEQ-GEAQHQACRHLIDELMILDEFLDMEGLFQALHDGEGFDIESCHFC-ALDDQEEDAQFAQD- 228 (573)
T ss_pred hhhccchhHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCCccccceeee-ecccHHHHhHHhcc-
Confidence 767776654444444332 112222222333334444333332 222211123432 2222343 33344444455431
Q ss_pred CCCccchHHHHHHHHHHHHHHhhhchhhhh--cccCCCchhHHHhHHHHHHHHHhCChHHHHHHHHhcccCCCCCchHHH
Q 000193 305 SDPIVEGFVGGVRLAWAVHLMLIHDEIAAR--ETVSSSSSSELSNIRSCLETIFSNNVFQFLLDKALRTAAYQNDDEDMV 382 (1885)
Q Consensus 305 ~~w~~~~~~a~i~law~~~l~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~al~~~vf~fl~~~ll~~~~~~~~~~~~~ 382 (1885)
.-......+.+.++|+++.......|... .... ..+-.....+.++.|+..++|+++.+.|++...-..+
T Consensus 229 -glicqdeacllllagaifhcaislLagaeerhfLm--dedhsSvVhkafeaAillnffeiLqrlLlndadGgid----- 300 (573)
T KOG4833|consen 229 -GLICQDEACLLLLAGAIFHCAISLLAGAEERHFLM--DEDHSSVVHKAFEAAILLNFFEILQRLLLNDADGGID----- 300 (573)
T ss_pred -CceeeccccchhhhhHHHHHHHHhccchhhcCccC--chhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcc-----
Confidence 23344566788888888877755544311 1111 1122345677789999999999999998886322222
Q ss_pred HHHHHHHHHHHHHHhhhhhhHhHHHHhhhhHHhhhhhhhhcCCcccccCCCCCCCCCCCCCCCcHHHHHHHHHHHhcCCc
Q 000193 383 YMNNAYLHKLITCFLSHQLARDKVKESKDKAMSVLNSYRIAGSHDFVHDSNLPSQQDTEIGPLPFVSLLEFVSEIYQKEP 462 (1885)
Q Consensus 383 ~~~~~~~h~li~~fIs~p~~~~klkelr~~~d~~l~~~R~~~~~~feed~~~~~~~~~~~~~~dle~fl~~ia~~Y~~~p 462 (1885)
.-......+|.+||+ ++. .+- +. ....++|..+.+.+++|+++.
T Consensus 301 -chrStacmcisafia--fve--------------------------inL--eL-----etdGnledIiDiaceVladee 344 (573)
T KOG4833|consen 301 -CHRSTACMCISAFIA--FVE--------------------------INL--EL-----ETDGNLEDIIDIACEVLADEE 344 (573)
T ss_pred -cchhHHHHHHHHHHH--HHh--------------------------hhe--ee-----ccCCcHHHHHHHHHHHHcCcc
Confidence 456778999999998 332 000 00 125678999999999998776
Q ss_pred cccccccccch---hHhh---------hcccCCCcchHHHHHHHHHHhcCCchhHHHHHHHhhCC
Q 000193 463 ELLSGNDVLWT---FVVF---------AGEDHTNFQTLVAFLKMLSTLASSQEGASKVYELLQGK 515 (1885)
Q Consensus 463 ~~~~~~~~fWg---Fi~w---------a~~~~~~~~~~~afl~ML~sLa~~~~~A~~~~~~L~~~ 515 (1885)
+++ ..||+ |... .|+. |...++|+.+|+||++|...|.+||+||.+.
T Consensus 345 SLc---clFWdrepfsdgpigciLddlcgeF---PfllaefiqLLraLseGkspAecVYnFLDKm 403 (573)
T KOG4833|consen 345 SLC---CLFWDREPFSDGPIGCILDDLCGEF---PFLLAEFIQLLRALSEGKSPAECVYNFLDKM 403 (573)
T ss_pred hhh---HHHhCCCCCCCCceeEEehhhhccc---chhhHHHHHHHHHHhcCCChHHHHHHHHHHh
Confidence 766 99995 4432 2222 6679999999999999999999999999764
No 6
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=78.83 E-value=15 Score=48.41 Aligned_cols=184 Identities=15% Similarity=0.137 Sum_probs=106.9
Q ss_pred HHHHhhcccCCCcchHHHHHHHHHHHHhccC-chhHHHHHhhcCcHHHHHHHhhhhhhhcccCCcchhhHHHHHHHHHHH
Q 000193 1415 LDLFIKDATQGSEPGKTLSLYVLDALICIDH-EKYFLNQLQSRGFLRSCLMNVSNVSYQDGKRSLDTLQRACTLEAELAL 1493 (1885)
Q Consensus 1415 idvIc~DA~~G~~~~r~~Al~lLd~Lv~l~~-~~~il~~L~~~g~L~~~v~sl~~~~L~~~l~~~~~l~~L~~yea~mal 1493 (1885)
+..+.+-.....++.|. -+++.++.+.. +....++....|++..++..+++. |.+ +-.+-+-+
T Consensus 162 ~~~L~~l~~~~~~~vR~---Rv~el~v~i~~~S~~~~~~~~~sgll~~ll~eL~~d---------DiL----vqlnalel 225 (503)
T PF10508_consen 162 LSKLKSLMSQSSDIVRC---RVYELLVEIASHSPEAAEAVVNSGLLDLLLKELDSD---------DIL----VQLNALEL 225 (503)
T ss_pred HHHHHHHHhccCHHHHH---HHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHhcCc---------cHH----HHHHHHHH
Confidence 33344333333455554 45566777765 467789999999999999999752 222 33466789
Q ss_pred HHHhhcccCcchHHHHHhcchHHHhhhc-ccccccCcccc--------cccCCCccC-CchhhhhhHhHHHHHHHHHH--
Q 000193 1494 LLRISHKYGKSGAQVLFSMGSLEHIASC-KAVGLQGSLRR--------VATKPRRAL-GGDIDRQRMIVTPMLRLVFS-- 1561 (1885)
Q Consensus 1494 LlRiAq~~tr~GA~~Ll~~~l~~~L~~~-~~l~~~P~~~~--------~~~~~~~~~-p~~~~ry~~lL~PvlrL~~s-- 1561 (1885)
|..+|+ ++.|++.|.+.|++..|.++ .--..||.... .+......- +...++|-.++--++++..+
T Consensus 226 l~~La~--~~~g~~yL~~~gi~~~L~~~l~~~~~dp~~~~~~l~g~~~f~g~la~~~~~~v~~~~p~~~~~l~~~~~s~d 303 (503)
T PF10508_consen 226 LSELAE--TPHGLQYLEQQGIFDKLSNLLQDSEEDPRLSSLLLPGRMKFFGNLARVSPQEVLELYPAFLERLFSMLESQD 303 (503)
T ss_pred HHHHHc--ChhHHHHHHhCCHHHHHHHHHhccccCCcccchhhhhHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999 89999999999999999874 33355562221 011111101 23445565555444444321
Q ss_pred ---HhhhhccCCccchhHHHHHHHHHHH-HHHHHHHHHHHhcCcCCCChh----hHHHHHHHHHHHH
Q 000193 1562 ---LTSLVDTSDFFEVKNKVVREVMDFI-KGHQLLVDQVLQENISEADEL----TMEQINLVVGILS 1620 (1885)
Q Consensus 1562 ---vl~~~~s~G~~~~n~~~~~qv~~Fl-~~h~~lv~~vLr~~~~~~~~~----~L~el~ll~~ll~ 1620 (1885)
...+++|.|+..+. .+.+.+| .++...+..+|+.-......+ -+.=++.+++|+.
T Consensus 304 ~~~~~~A~dtlg~igst----~~G~~~L~~~~~~~~~~~l~~~~~~~~~~~~~lk~r~l~al~~il~ 366 (503)
T PF10508_consen 304 PTIREVAFDTLGQIGST----VEGKQLLLQKQGPAMKHVLKAIGDAIKSGSTELKLRALHALASILT 366 (503)
T ss_pred hhHHHHHHHHHHHHhCC----HHHHHHHHhhcchHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Confidence 12233333321222 3555666 677777777777765543222 3444566666663
No 7
>PLN03205 ATR interacting protein; Provisional
Probab=52.67 E-value=1.6e+02 Score=36.51 Aligned_cols=52 Identities=19% Similarity=0.198 Sum_probs=38.4
Q ss_pred cchHHHHHHHHHhcCCCC-----Cc-------hhHHHHHHHHHHHhhcCCCCCHHHHHHHhcch
Q 000193 965 YSCLKIILEILEKVSKPD-----VN-------ALLHEFGFQLLYELCLDPLTCGPTMDLLSNKK 1016 (1885)
Q Consensus 965 ~ScLhsIL~lL~~~~~~~-----~~-------p~L~e~~~~lL~~Lc~~p~Ts~~~L~~LR~~~ 1016 (1885)
..-|--|+..|-+--+.+ .. ..|..-++-+|-+|.+||-.|.++|+.|-.+.
T Consensus 534 ~NFLmLILqvLvSemd~e~s~~~~~~e~~KaRtLLmREaLILLNRLvSn~~ySa~vL~vLT~sR 597 (652)
T PLN03205 534 SNFLMLILHLLVAEIDSESTEFHPKAEIFKARTLLMREILILLNRLVSGLSSSATILKELTKSR 597 (652)
T ss_pred ccHHHHHHHHHHHHhhhhhhccCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHhhh
Confidence 456777777776543211 11 24677788899999999999999999999776
No 8
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=38.36 E-value=6.7e+02 Score=33.14 Aligned_cols=328 Identities=14% Similarity=0.150 Sum_probs=151.8
Q ss_pred cchHHHHHHHHHHHHHHHhcCcccccccc-C-CChHHHHHhccCCCCChhHHHHHHHHHHHhhhcChhhHHHHHH--HHh
Q 000193 552 EGDAKALVAYLNVLQKVMENGNSIERKNW-F-PDIEPLFKLLSYENVPPYLKGALRNAIAACIHVSLVMKDNIWR--LLE 627 (1885)
Q Consensus 552 ~~e~~~L~a~L~Li~~V~~~~~~~e~~~w-~-~~i~~L~~Ll~~~~vp~~Lka~i~~~Laal~~~s~~~a~~iW~--~Ld 627 (1885)
.++...-..-.++++.++++... ...- . +.+..|-.++.. -....|--+++++..+++.+++....+|. .++
T Consensus 130 ~~d~~Va~~A~~~L~~l~~~~~~--~~~l~~~~~~~~L~~l~~~--~~~~vR~Rv~el~v~i~~~S~~~~~~~~~sgll~ 205 (503)
T PF10508_consen 130 DPDLSVAKAAIKALKKLASHPEG--LEQLFDSNLLSKLKSLMSQ--SSDIVRCRVYELLVEIASHSPEAAEAVVNSGLLD 205 (503)
T ss_pred CCcHHHHHHHHHHHHHHhCCchh--HHHHhCcchHHHHHHHHhc--cCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHH
Confidence 35566677788999999987652 1111 1 224555666652 23456677999999999878888877776 555
Q ss_pred hcCCCcccccCCCCCCCCC-CCccccHHHHHHHHhhhccCCcchHHHHHHHHHhhcCCCCCC-CCccccchhHHHHHHhh
Q 000193 628 QYDLPVVVGTHVGNTAQPI-AGQVYDMQFELNEIEARREQYPSTISFLNLLNALIAEEKDVS-DRGRRFVGIFRFVYDHV 705 (1885)
Q Consensus 628 ~~~i~~~~g~~~~~~~~~~-~~~~~~i~~el~~iE~~~~~Yp~T~aFl~Ll~~Li~~~~~~l-g~g~R~~~yi~FV~~~V 705 (1885)
.. +. .... .... .-....+..++-+- ...-.|=...|+++.|..++.....+. ..+-.++|++.|.- ++
T Consensus 206 ~l----l~--eL~~-dDiLvqlnalell~~La~~-~~g~~yL~~~gi~~~L~~~l~~~~~dp~~~~~~l~g~~~f~g-~l 276 (503)
T PF10508_consen 206 LL----LK--ELDS-DDILVQLNALELLSELAET-PHGLQYLEQQGIFDKLSNLLQDSEEDPRLSSLLLPGRMKFFG-NL 276 (503)
T ss_pred HH----HH--HhcC-ccHHHHHHHHHHHHHHHcC-hhHHHHHHhCCHHHHHHHHHhccccCCcccchhhhhHHHHHH-HH
Confidence 43 21 0000 0000 00001111222110 011122234456677777776654433 33334788887753 33
Q ss_pred hCCCCccccCCchhhHHHHHHHHHHHHHHHhccCCChhhhhhhhhccCCcCCCCCccccCcHHHHHHHhccChHHHHHHH
Q 000193 706 FGPFPQRAYADPCEKWQLVVACLKHFHMILNMYDIQEEDIDNAVEQSSTLTQSSPIQMQLPVLELLKDFMSGKAVFRNIM 785 (1885)
Q Consensus 706 f~~~~~r~Y~~~~erw~v~~~~L~~~~~~L~~y~~~~~dl~~~~~~~~~~~~~~~l~~~~P~~~vm~~~L~~~~v~~~L~ 785 (1885)
+.. +|.+--+.--..+..+..++.+-+++. ....+++- ..+.+...|..++. ...++.++.++
T Consensus 277 a~~-------~~~~v~~~~p~~~~~l~~~~~s~d~~~--~~~A~dtl------g~igst~~G~~~L~--~~~~~~~~~~l 339 (503)
T PF10508_consen 277 ARV-------SPQEVLELYPAFLERLFSMLESQDPTI--REVAFDTL------GQIGSTVEGKQLLL--QKQGPAMKHVL 339 (503)
T ss_pred Hhc-------ChHHHHHHHHHHHHHHHHHhCCCChhH--HHHHHHHH------HHHhCCHHHHHHHH--hhcchHHHHHH
Confidence 332 222111111222222233333333321 11222221 11222246665551 22233444433
Q ss_pred HhhccChhhhhhhhcccccCcHHHHHHHHHHHHHHHHHhhhhhh-hhhhcccccchhhhhccCchHHHHHHhhhcCCCcc
Q 000193 786 GILQPGVDSIITERNNQIYGPLLEKAVQLSLEIVILVFEKDLLL-SDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLP 864 (1885)
Q Consensus 786 ~ii~~gvd~l~~~~~~~~~~~~l~~~v~~aL~Il~~vL~~q~~f-~d~lrp~~~~l~~~Ls~~~~~I~~l~~yv~~~~~p 864 (1885)
+-+.... ... ...+.. +||+-+..++.....= .+.+..+....=..++.++..- .+..++..+. |
T Consensus 340 ~~~~~~~----~~~-----~~~lk~---r~l~al~~il~~~~~~~~~~i~~~~~~w~~~~~~~~~~~-~l~~~~~qPF-~ 405 (503)
T PF10508_consen 340 KAIGDAI----KSG-----STELKL---RALHALASILTSGTDRQDNDILSITESWYESLSGSPLSN-LLMSLLKQPF-P 405 (503)
T ss_pred HHHHHHh----cCC-----chHHHH---HHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhcCCchHH-HHHHHhcCCc-h
Confidence 3221111 000 012333 4555555555432210 0000000000001111222111 5666677787 9
Q ss_pred hhHHHHHHHHHHHhhhHHhHHHHHhccchhHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHhcC
Q 000193 865 QIQQCSIKIMSILSSRMVGLVQLLLKYNAASSLVEDYAACLELRSEESQIIEKSGDDPGVLIMQLLIDNI 934 (1885)
Q Consensus 865 ~ial~AikIL~~ls~~~~~l~~~l~~~~es~~I~~~fv~~Le~~~~~~~~~e~~~~~~k~~IL~lLl~~L 934 (1885)
++-.++.++|..++.+--++..+.... ||++.+-.+-. +.+-...+.|+.|.+-|....
T Consensus 406 elr~a~~~~l~~l~~~~Wg~~~i~~~~--------gfie~lldr~~---E~~K~~ke~K~~ii~~l~~~~ 464 (503)
T PF10508_consen 406 ELRCAAYRLLQALAAQPWGQREICSSP--------GFIEYLLDRST---ETTKEGKEAKYDIIKALAKSS 464 (503)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHhCc--------cHHhhhcCCCC---CCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999996544444444333 78888843211 111122457899998888664
No 9
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]
Probab=18.56 E-value=6.3e+02 Score=34.58 Aligned_cols=163 Identities=20% Similarity=0.227 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccchhhhhccCchHHHHHHhhhcCCCcchhHHHHHHHHHHHhhh---HHhHHHHHhc
Q 000193 814 LSLEIVILVFEKDLLLSDFWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSR---MVGLVQLLLK 890 (1885)
Q Consensus 814 ~aL~Il~~vL~~q~~f~d~lrp~~~~l~~~Ls~~~~~I~~l~~yv~~~~~p~ial~AikIL~~ls~~---~~~l~~~l~~ 890 (1885)
++++++..+|.. || ..+..++.-.|.-|..+...+...+ .-|--.++-+|..+..- ...+| +|++
T Consensus 141 ~aIqLlsalls~--------r~--~e~q~~ll~~P~gIS~lmdlL~Dsr-E~IRNe~iLlL~eL~k~n~~IQKlV-AFEN 208 (970)
T KOG0946|consen 141 YAIQLLSALLSC--------RP--TELQDALLVSPMGISKLMDLLRDSR-EPIRNEAILLLSELVKDNSSIQKLV-AFEN 208 (970)
T ss_pred HHHHHHHHHHhc--------CC--HHHHHHHHHCchhHHHHHHHHhhhh-hhhchhHHHHHHHHHccCchHHHHH-HHHH
Confidence 566666666643 23 2222233334444555554455444 44666677777777611 11122 2333
Q ss_pred cchhHHHHHHHHHHhccccccccccccC--CCChHHHHHHHHHhcCC--------CCCChHhhhhhccccCCCCcccccc
Q 000193 891 YNAASSLVEDYAACLELRSEESQIIEKS--GDDPGVLIMQLLIDNIS--------RPAPNITHLLLKFDLDTPIERTVLQ 960 (1885)
Q Consensus 891 ~~es~~I~~~fv~~Le~~~~~~~~~e~~--~~~~k~~IL~lLl~~L~--------~~~PnlAHlLLGF~~~~~~~~~~l~ 960 (1885)
..+ ..-+.+|.+ + ..|.+ -+++=..+.++|-.|.+ .--|-++|+|=-|.+.++ +.....
T Consensus 209 aFe------rLfsIIeeE---G-g~dGgIVveDCL~ll~NLLK~N~SNQ~~FrE~~~i~rL~klL~~f~~~d~-Ev~~W~ 277 (970)
T KOG0946|consen 209 AFE------RLFSIIEEE---G-GLDGGIVVEDCLILLNNLLKNNISNQNFFREGSYIPRLLKLLSVFEFGDG-EVFGWS 277 (970)
T ss_pred HHH------HHHHHHHhc---C-CCCCcchHHHHHHHHHHHHhhCcchhhHHhccccHHHHHhhcCcccccCc-cccccc
Confidence 221 122223211 1 11111 13455778888888874 335788888888877663 222222
Q ss_pred CCCCcchHHHHHHHHHhcCCCCCchhHHHHH------HHHHHHhhc
Q 000193 961 PKFHYSCLKIILEILEKVSKPDVNALLHEFG------FQLLYELCL 1000 (1885)
Q Consensus 961 p~~~~ScLhsIL~lL~~~~~~~~~p~L~e~~------~~lL~~Lc~ 1000 (1885)
+ ...+|+|-.|.++.....|...+..+..| -++|..||.
T Consensus 278 ~-Qrv~Nv~~~Lqivr~lVsP~Nt~~~~~q~qk~l~ss~ll~~Lc~ 322 (970)
T KOG0946|consen 278 T-QRVQNVIEALQIVRSLVSPGNTSSITHQNQKALVSSHLLDVLCT 322 (970)
T ss_pred H-HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHcchHHHHHH
Confidence 2 35789999999999887655444333333 245555665
No 10
>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal
Probab=14.36 E-value=1.6e+03 Score=24.66 Aligned_cols=124 Identities=21% Similarity=0.187 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh---hhcccccchhhhhccCchHHHHHHhhhcCCCcchhHHHHHHHHHHHhhhHHh-
Q 000193 808 LEKAVQLSLEIVILVFEKDLLLSD---FWRPLYQPVDVILSQDHNQIVALLEYVRYDFLPQIQQCSIKIMSILSSRMVG- 883 (1885)
Q Consensus 808 l~~~v~~aL~Il~~vL~~q~~f~d---~lrp~~~~l~~~Ls~~~~~I~~l~~yv~~~~~p~ial~AikIL~~ls~~~~~- 883 (1885)
-...-..+|++++.+|+.....+. .+.++.. ++ +.+....+.+.+..++ |.+...|++|+..+-.++..
T Consensus 35 ~~~~k~l~LeLl~~iL~~~~~~f~~~~~~~~l~~----~l--k~~l~~~Ll~~~~~~~-~~i~~~slri~~~l~~~~~~~ 107 (168)
T PF12783_consen 35 DERSKLLSLELLESILENHGSVFRSSEEHPSLIN----LL--KDDLCPALLKNLSSSD-FPIFSRSLRIFLTLLSRFRSH 107 (168)
T ss_pred hHHHHHHHHHHHHHHHHhCHHHHhCCcchHHHHH----HH--HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999987555444 1112111 11 2245566777776666 99999999999888744432
Q ss_pred HHHHHhccchhHHHHHHHHH-HhccccccccccccCCCChHHHHHHHHHhcCCCCCChHhhhhhccccCCC
Q 000193 884 LVQLLLKYNAASSLVEDYAA-CLELRSEESQIIEKSGDDPGVLIMQLLIDNISRPAPNITHLLLKFDLDTP 953 (1885)
Q Consensus 884 l~~~l~~~~es~~I~~~fv~-~Le~~~~~~~~~e~~~~~~k~~IL~lLl~~L~~~~PnlAHlLLGF~~~~~ 953 (1885)
+-. |.+-+....+. .++. +..+..-|..+|+.+..-.. .+..+..+...|||...
T Consensus 108 Lk~------ele~~l~~i~~~il~~--------~~~~~~~k~~~Le~l~~l~~-~p~~l~~lf~NYDCd~~ 163 (168)
T PF12783_consen 108 LKL------ELEVFLSHIILRILES--------DNSSLWQKELALEILRELCK-DPQFLVDLFVNYDCDLN 163 (168)
T ss_pred HHH------HHHHHHHHHHHHHHcc--------CCCcHHHHHHHHHHHHHHHh-ChhHHHHHHHHcCCCCC
Confidence 211 12222222333 2222 11123467888888887764 33579999999999765
Done!