Your job contains 1 sequence.
>000205
MDSYSPLLEKARVPQPSLQKFAVVSIFSKLRTSPAHLGPDSEPGRDAITQCLNSSSPAVV
DQTVREFCRLVADSKFDLSLGLLELQSALEGSDPKFVTLFVKALGYLVRLGFERFNGSWK
LGATENHPFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFS
DSLSSLFVRQLVSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKEQRNLEFVLDCMVD
SYIVVLRHLVSNGLLVTEAQMSGMELLGTVLSLYTSPFKQSGGVEHIVEVLKHVLVAQFE
LRLQYKPELSSVILYLFSILIDSELEHEQLCILKFLLFLINWKSENEYGFGGATCDLSEE
LLLIFPILNLMSSPSKSVKGVASDLLVLLEKLLVKLLAAPKMEVAMNAGNPSIIGFGSII
FRLLKNLWFQDQNSTSRSFFLSLISTGNYRIEEMDEGPGPWTSQLRELLLCIIDSKKSSL
PVSASQEALSTEMSMLLGAIASVLVIHPSLGSSAVDAFATVGKMDPKLGVPLLLAILFYS
NMFTRKDVVCQNKLPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPVLYATATRLLCQ
TWEINDRAFGSLQGVLQPKLLIDFKSERNICISIAASIHDVCRKDPDRGVDLILSVAACI
ESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLDYSLDPMLAQSLCILLRWGAMD
AEAYSEASRTVLKILWDTGTTTHLGHELQWAKARASAFEALTQYEVSHIDKNILDFKQRS
FEILISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPGSKIEKLLDIFPRVIFSSD
KKIYARELPGAALLCLSFTRKDLRNQGEARGLQNVLSGYENALIDIAASFQLSRNIFVAL
LSLQSWKFFMQRWVRAIIMSIDAKAESIVPDRTFKAANDILKTLMRVAEESMPRSAENIA
LAIGALCSVLPQSAHTIKSTASKFLLSWLFQHEHEHRQWSAAISIGLISSSLHLTDHKQK
FQNITGLLEVLSSSRSILVRGACGIGLGFSCQDLLTWAAAADGTADGTNLDKETYKIEEM
ELLGRTVKALSMMIFQLAPSSSKILEGLSAHFPVKTCDVKMNVTSEFSDDGLEDDIWGVA
GLVIGLASSISVIYRAGKHDVVLKIKDLIVSWIPHVNSLVENYGSGGERSEIVLSVGSSL
ALPIIVAFCRGVELMDDKELNHLVHGYRELISELLSVNKSGNFHKSLLMASCVGAGSLLA
CIFNEGAHSLNVDYVNAFLELFRKCYSNPYPPIIHLGGMLGVVNALGAGAGYLIHVDPLN
SSMRAGYAQKEHPYTLGPLFSDPVCEQHVTSLMQEMFLVAQTSDDHQLQQYAAWAMSFLR
CHLWSKELLNTDNNIKADLLGSKSVSQRFSNDNVVMKLGLWLSHLNYSGTDATARVVTVS
TILRCLTRAPRLPTLDWGAIIRCCMRYEAQIAKGLPPDSAYKRGILREECIQFSLAHANQ
FHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLEKLFDDMADYLFSVTS
YQVYNPDQKSFLRVSFWNGLHHCLEEASLDSLEHIPNMERCMEVLFALLPASQYAAIIGV
NQKNLVEEWSAAVRCLGKARREWVLDFLQVLHVNPLQGDVQLSEVVKKMQAKAKLVRIGS
FPLTELGKLKAYILNFKSLGVWDVLIEVVAALQHAEEGVRRQWLVDTIEISCVSCYPSTA
LQFVGLLSGSCCRYMPFLILDSSTVLNDLPVTLPSLLSKPGWETVAEPFMSYLWASTERI
YNWVVTDVTSSQSSPSTQPIDESENDMAALLLHVMHRACISLKDYLPPEKQLRLSNMLVR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000205
(1860 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089114 - symbol:RST1 "RESURRECTION1" species:... 4673 0. 1
UNIPROTKB|E1C9A8 - symbol:LOC100858921 "Uncharacterized p... 173 3.1e-10 8
UNIPROTKB|Q5VW36 - symbol:FOCAD "Focadhesin" species:9606... 152 1.1e-09 6
UNIPROTKB|F1MQ56 - symbol:FOCAD "Uncharacterized protein"... 153 1.8e-09 8
MGI|MGI:2676921 - symbol:Focad "focadhesin" species:10090... 160 3.5e-05 7
RGD|1311849 - symbol:Focad "focadhesin" species:10116 "Ra... 156 3.6e-05 6
DICTYBASE|DDB_G0293192 - symbol:DG1098 "armadillo-like he... 130 0.00038 4
>TAIR|locus:2089114 [details] [associations]
symbol:RST1 "RESURRECTION1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0006723
"cuticle hydrocarbon biosynthetic process" evidence=IMP]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA;IMP] [GO:0006486 "protein glycosylation" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009880 "embryonic pattern specification"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] InterPro:IPR016024 EMBL:CP002686
SUPFAM:SSF48371 GO:GO:0009793 GO:GO:0006723 InterPro:IPR022542
Pfam:PF12530 IPI:IPI01019725 RefSeq:NP_189404.2 UniGene:At.43909
PRIDE:F4IWL6 EnsemblPlants:AT3G27670.1 GeneID:822389
KEGG:ath:AT3G27670 OMA:AMDAEAY Uniprot:F4IWL6
Length = 1841
Score = 4673 (1650.0 bits), Expect = 0., P = 0.
Identities = 954/1860 (51%), Positives = 1257/1860 (67%)
Query: 1 MDSYSPLLEKARVPQPSLQKFAVVSIFSKLRTSPAHLGPDSEPGRDAITQCLNSSSPAVV 60
M SY+ LLEK RVPQPS+Q+FAV+S+FSKLR++P G ++E GR+AI+ CL S S VV
Sbjct: 1 MASYATLLEKTRVPQPSIQRFAVISVFSKLRSAPEQFGSEAEAGREAISFCLTSESITVV 60
Query: 61 DQTVREFCRLVADSKFDXXXXXXXXXXXXXXXDPKFVTLFVKALGYLVRLGFERFNGSWK 120
DQ+V E CRLV+DS D D K V+LFVK LG+L+R+G+ER NG+WK
Sbjct: 61 DQSVHELCRLVSDSVLDLSRGLLELQSALEGCDSKLVSLFVKGLGFLIRIGYERNNGNWK 120
Query: 121 LGATENHPFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFS 180
+TENHPF++I SSR E TEL+ QV LF+ N+ LGMV VCEFL PF NF+ILR+P S
Sbjct: 121 FNSTENHPFVRIQSSRVETQTELLHQVSLFVMHNRRLGMVGVCEFLEPFLNFTILRIPLS 180
Query: 181 DSLSSLFVRQLVSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKEQRNLEFVLDCMVD 240
DS SSLF R+L+SS+ASLCCS +ALP+F +L CL+Y+P NLE ++ +VD
Sbjct: 181 DSSSSLFARELISSMASLCCSSRHEALPIFRLLMRCLKYIP------GNNLEVIVKILVD 234
Query: 241 SYIVVLRHLVSNGLLVTEAQMSGMELLGTVLSLYTSPFKQSGGVEHIVEVLKHVLVAQFE 300
+Y VV+R LV GL VTE + G++L+ VL L SP Q+ E ++E LKH+L Q +
Sbjct: 235 AYTVVVRDLVGTGLEVTEVHLLGVQLVDGVLFLCASPHVQTTEQESVIESLKHLLAVQKD 294
Query: 301 LRLQYKPELSSVILYLFSILIDSELEHEQLCILKFLLFLINWKSENEYGFGGATCDLSEE 360
L L Y +LS V+L L +L S +EHEQLCILKFLLFL+ WK+E+E S E
Sbjct: 295 LGLAYSHDLSLVVLSLVFMLAKSTVEHEQLCILKFLLFLLKWKTESENLSVKDAAGSSVE 354
Query: 361 LLLIFPILNLMSSPSKSVKGVASDXXXXXXXXXXXXXAAPKMEVAMNAGNPSIIGFGSII 420
LL+FPI LMSSPSKS+K AS APK+EV + G+ + GS++
Sbjct: 355 SLLLFPITALMSSPSKSIKVAASKVLSIVENFLVTVSNAPKIEVHTSKGDSPLSRVGSVV 414
Query: 421 FRLLKNLWFQDQNSTSRSFFLSLISTGNYRIEEMDEGPGPWTSQLRELLLCIIDSKKSSL 480
FR ++ LW Q+ + S S FL + T +E GP W S LRE D KK
Sbjct: 415 FRFMQQLWHQNDYTPSTSSFLRVAYTNGSEKQETYLGPVTWNSLLREHAERFWDKKK--- 471
Query: 481 PVSASQEALSTEMSMLLGAIASVLVIHPSLGSSAVDAFATVGKMDPKLGVPLLLAILFYS 540
+SAS LS E+ +LLGA+A V+V+HPSLG+ A+ + +G +D K+ VPLLLA+L++S
Sbjct: 472 -LSASF-CLSQEIPILLGAVAGVMVMHPSLGADAIGSLTIIGGIDSKMSVPLLLAVLYFS 529
Query: 541 NMFTRKDVVCQNKLPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPVLYATATRLLCQ 600
N+ +R +V CQ+ L KLLG+LPS+A+Q VMIPLVVQTI PML K+AK +LYATA RLLCQ
Sbjct: 530 NLLSRTNVPCQSLLSKLLGLLPSLAAQQVMIPLVVQTITPMLRKDAKGLLYATAIRLLCQ 589
Query: 601 TWEINDRAFGSLQGVLQPKLLIDFKSERNICISIAASIHDVCRKDPDRGVDLILSVAACI 660
TW +NDRAF SLQ VL+P+ I++ SER+ICIS+AASIHDVC++ PDRGVDLILSV ACI
Sbjct: 590 TWVVNDRAFSSLQEVLRPQGFIEYISERHICISMAASIHDVCKRHPDRGVDLILSVQACI 649
Query: 661 ESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLDYSLDPMLAQSLCILLRWGAMD 720
ES++ ++ALG QSL++LCEADVIDFYTAWDVI KH LDP+LA S+C LL+WGAMD
Sbjct: 650 ESQNCPVRALGFQSLSHLCEADVIDFYTAWDVIKKHAQHIKLDPLLAYSVCHLLKWGAMD 709
Query: 721 AEAYSEASRTVLKILWDTGTTTHLGHELQWAKARASAFEALTQYEVSHIDKNILDFKQRS 780
AEAY E + VL ILW+ G++ H+ QW KAR SA AL QYEVS ++ DF +
Sbjct: 710 AEAYPEDAENVLNILWEIGSSMQKPHDSQWTKARVSAIVALGQYEVSFMENKFSDFNKNC 769
Query: 781 FEILISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPGSKIEKLLDIFPRVIFSSD 840
+L SETN +L A+E +KI+ HEHS RRR+V+EKKVPGSKIEKLLD+ P+VIF +
Sbjct: 770 TYLLFSETNAEILNALEDLSIKIMIHEHSVRRRYVREKKVPGSKIEKLLDVIPQVIFPAG 829
Query: 841 KKIYARELPGAALLCLSFTRKDLRNQGEARGLQNVLSGYENALIDIAASFQLSRNIFVAL 900
K+I ELPGAALLCLS+ +D++ G +R +V YE A + S QLSRNI +AL
Sbjct: 830 KEIKTGELPGAALLCLSYNPRDVKF-GSSRSFHDVHFQYEEAFRVVVKSLQLSRNISLAL 888
Query: 901 LSLQSWKFFMQRWVRAIIMSIDAKAESIVPDRTFKAANDILKTLMRVAEESMPRSAENIA 960
+SLQS K FM+RW+RA I+SIDA + + D+T KA N+I+K+L+ +AEE++PR AENIA
Sbjct: 889 ISLQSLKAFMRRWMRANILSIDATTKELSSDKTSKATNNIMKSLVHMAEEALPRCAENIA 948
Query: 961 LAIGALCSVLPQSAHTIKSTASKFLLSWLFQHEHEHRQWXXXXXXXXXXXXXHLTDHKQK 1020
LA+GALC+ LP ++H IK++ASKFLLSWL +HEHEHRQW H+TDHKQK
Sbjct: 949 LALGALCAALPAASHNIKASASKFLLSWLLEHEHEHRQWTAGISLGLISSSLHVTDHKQK 1008
Query: 1021 FQNITGLLEVLSSSRSILVRGACGIGLGFSCQDLLTWXXXXXXXXXXXNLDKETYKIEEM 1080
FQNI+GLLEVL SS+S LV+GACG+GLGFSCQDLLT ++D ++Y+ +E
Sbjct: 1009 FQNISGLLEVLCSSKSTLVKGACGVGLGFSCQDLLT----RTEASASSDIDSDSYRNQEE 1064
Query: 1081 ELLGRTVKALSMMIFQLAPSSSKILEGLSAHFPVKTCDVKMNVTS---EFSDDGLEDDIW 1137
LLGR V+ LS ++ + ILE LSA FP D + + E SDD +DD W
Sbjct: 1065 RLLGRIVRLLSSILHGFLHTPCDILESLSALFPPGEEDNVIGLPQLLDESSDD-FDDDTW 1123
Query: 1138 GVAGLVIGLASSISVIYRAGKHDVVLKIKDLIVSWIPHVNSLVENYGSGGERSEIVLSVG 1197
G+AGL+IGL S+ IYRAGK D V+KIK+LIVSWIP+ +SL + GS + S + SVG
Sbjct: 1124 GIAGLIIGLGMSVGAIYRAGKKDAVVKIKNLIVSWIPYADSLKQTSGSNSKVSVRLFSVG 1183
Query: 1198 SSLALPIIVAFCRGVELMDDKELNHLVHGYRELISELLSVNKSGNFHKSLLMASCVGAGS 1257
S LALPI++ FC+ VEL D E++ ++ +++LISELL V KSG K LLMASC+GAG
Sbjct: 1184 SCLALPIVITFCQKVELFDAHEVDDIIGCFKDLISELLIVRKSGALRKRLLMASCIGAGD 1243
Query: 1258 LLACIFNEGAHSLNVDYVNAFLELFRKCYSNPYPPIIHXXXXXXXXXXXXXXXXYLIHVD 1317
LL + NEG H + ++ V LELF+KCYS YPP+ H L++
Sbjct: 1244 LLGSVLNEGIHPVKIESVKELLELFKKCYSGLYPPVAHFGGMLGVVNVLGAGAGNLVYSH 1303
Query: 1318 PLNSSMRAGYAQKEHPYTLGPLFSDPVCEQHVTSLMQEMFLVAQTSDDHQLQQYAAWAMS 1377
P + A + E Y GPL S+ Q +T ++QE+FL+AQ + D QLQ YAAWA+S
Sbjct: 1304 PRPRAPPASSEENEISYVSGPLLSNAYFTQQLTPVVQEIFLIAQNTKDRQLQHYAAWAIS 1363
Query: 1378 FLRCHLWSKELLNTDNNIKADLLGSKSVSQRFSNDNVVMKLGLWLSHLNYSGTDATARVV 1437
LR ++ S E + N ++D S+S +VMKL L++ ++ + +
Sbjct: 1364 ILRTYMRSGESSSLSNENQSDDSDRNSISHNVPEHTMVMKLAQGLTNPSFPLAGSPLNIG 1423
Query: 1438 TVSTILRCLTRAPRLPTLDWGAIIRCCMRYEAQIAKGLPPDSAYKRGILREECIQFSLAH 1497
T+++ LRCL+ APRLP LDWGA IR M+ E Q D K LREEC +FSLAH
Sbjct: 1424 TMASALRCLSHAPRLPNLDWGATIRRLMKQETQTDVTQSGDVP-KEITLREECFKFSLAH 1482
Query: 1498 ANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLEKLFDDMADYLFS 1557
A++F LL+FLDELS+L RFK LE +LQ+ LL HL L+++FSGSR+ KLFDD++ ++ S
Sbjct: 1483 ASEFDELLAFLDELSELSRFKALEESLQSCLLCHLGGLMRIFSGSRMNKLFDDVSCFVVS 1542
Query: 1558 VTSYQVYNPDQKSFLRVSFWNGLHHCLEEASLDSLEHIPNMERCMEVLFALLPASQYAAI 1617
++S Q Y+ DQKS LRVS W GL CLEE SL+S E++ +E+C+E+LFA+LP + +
Sbjct: 1543 LSSDQTYSCDQKSSLRVSCWKGLSQCLEETSLESSEYVTKIEKCIELLFAVLPVASQSP- 1601
Query: 1618 IGVNQKNLVEEWSAAVRCLGKARREWVLDFLQVLHVNPLQGDVQLSEVVKKMQAKAKLVR 1677
+Q V+EWS AV CL K+ R+W+ FLQV ++ P +KK+QAKAKL +
Sbjct: 1602 -RADQMGSVKEWSEAVTCLQKSHRDWLYKFLQVSNLEPGNEKTNFQGDLKKIQAKAKLAK 1660
Query: 1678 IGSFPLTELGKLKAYILNFKSLGVWDVLIEVVAALQHAEEGVRRQWLVDTIEISCVSCYP 1737
+GS P +ELGKLKA ILN + +WDVLIE+VAAL HAE G++RQWL+D +EISCVS +P
Sbjct: 1661 LGSVPFSELGKLKAIILNCEESDIWDVLIEIVAALHHAEGGIKRQWLIDAVEISCVSSHP 1720
Query: 1738 STALQFVGLLSGSCCRYMPFLILDSSTVLNDLPVTLPSLLSKPGWETVAEPFMSYLWAST 1797
STA+ FVGLLS CC YMPFL LD STVL+D+ VT+ SLLS P +E V EPF+S+LW S
Sbjct: 1721 STAIIFVGLLSSICCEYMPFLNLDRSTVLSDMSVTVTSLLSDPSYEVVTEPFISFLWTSL 1780
Query: 1798 ERIYNWVVTDVXXXXXXXXXXXIDESENDMAALLLHVMHRACISLKDYLPPEKQLRLSNM 1857
ER+Y++ T+ I +SE D A +L+ VMH C++ +D+LP EKQLRL++M
Sbjct: 1781 ERVYSFA-TE-SDANARLSSQQIAQSERDKAPMLVKVMHYICVAFRDHLPLEKQLRLASM 1838
>UNIPROTKB|E1C9A8 [details] [associations]
symbol:LOC100858921 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005925 "focal adhesion" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 GO:GO:0005925 CTD:54914
OMA:SCDTRPL InterPro:IPR021392 InterPro:IPR022542 Pfam:PF11229
Pfam:PF12530 GeneTree:ENSGT00390000004438 EMBL:AADN02057247
EMBL:AADN02057248 EMBL:AADN02057249 EMBL:AADN02057250
EMBL:AADN02057251 EMBL:AADN02057252 EMBL:AADN02057253
EMBL:AADN02057254 EMBL:AADN02057255 EMBL:AADN02057256
EMBL:AADN02057257 EMBL:AADN02057258 IPI:IPI00574167
RefSeq:NP_001182532.1 UniGene:Gga.20683 Ensembl:ENSGALT00000024313
GeneID:427233 KEGG:gga:427233 NextBio:20828522 Uniprot:E1C9A8
Length = 1800
Score = 173 (66.0 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 77/280 (27%), Positives = 126/280 (45%)
Query: 473 IDSKKSSLPVSASQEALSTEMSMLLGAIASVLVIHPSLGSSAVDAFAT---VGKMDPKLG 529
+ S +S LPV+ A + +LL + L+I G S D T V K D
Sbjct: 433 LSSVRSLLPVTTQVPA---HIFLLL----AYLLIQEK-GDSLRDVLQTTTEVAKADCSQ- 483
Query: 530 VPLLLAILFYSNMFTRKDVVCQNKLPK-LLGMLPSIASQSVMIPLVVQTILPMLHKNAKP 588
VP L+ +L + + R + L K +L LPS+ V + +++TI ML + P
Sbjct: 484 VPSLIPVLVF--ILGRP---LEPALYKDILYTLPSLGVHKVCVAQILRTI-HML--GSTP 535
Query: 589 VLYATATRLLCQTWEINDRAFGSLQGVLQ----PKLLIDFKSERNICISIAASIHDVCRK 644
L A RL+ WE DR + LQ L P L +D ++ I+ AA I D+C++
Sbjct: 536 KLRAITLRLMTSLWERQDRIYPELQKFLATSDVPSLAVDKDAQWEKVIAKAACIRDICKQ 595
Query: 645 DP-DRGVDLILSVAA----CIESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLD 699
P G D++ +++ C + A+ LQ L LCEA+V+ + W+ ++ L
Sbjct: 596 RPYQHGADMLAAISQVLNECTKPDQASPAAIVLQGLQALCEAEVVCINSTWNALSPK-LS 654
Query: 700 YSLDPMLAQSL---CILLRWGAMDAEAYSEASRTVLKILW 736
P++ ++L L+ ++ Y + VL LW
Sbjct: 655 CDTRPLILKALNELFALVPSLTVNTNEYEKFKAQVLSFLW 694
Score = 59 (25.8 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 122 GATEN-HPFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNF 172
G N HP I +L +R + L+QQ+ +F Q + PF +
Sbjct: 129 GIRNNPHPLITVLENRPDCWPVLLQQITVFFHQCPERAQSSCVAIMAPFLRY 180
Score = 59 (25.8 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 54/233 (23%), Positives = 88/233 (37%)
Query: 707 AQSLCILLRWGAMDAEAYSEASRTVLKILWDTGTTTH-LGHELQWAKARASAFEALTQYE 765
AQ L L + + EA S K L G+ H + H + A+ ++ E T
Sbjct: 687 AQVLSFLWK-NTQNKEAIVAIS--AYKSLSSFGSDEHTILHLPEQARTEINSLED-TDVN 742
Query: 766 VSHIDKNILDFKQRSFEI-LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPGSK 824
+K + F S I L+S T VL A E F ++ E +N R V + G
Sbjct: 743 EDEEEKEVDLFVPGSSYIKLLSLTPDSVLGAFEEFATSLVKQEMTNMPRGVYHSALRGGA 802
Query: 825 IE----KLLDIFPRVIFSS-DKKIYARELPGAA---LLCLSFTRKDLRNQGEA--RGLQN 874
K + P + ++ PG A LLC + G+ R L +
Sbjct: 803 TRTDQGKTVAGIPNFLLKMYERNKQPGMTPGLAAGMLLCYDLP-VHMGRDGKPINRFLAS 861
Query: 875 VLSGYENALIDIAASFQLSRNIFV-ALLSLQSWKFFMQRWVRAIIMSIDAKAE 926
++ L+ + + + + ++L QSW FM R A++ A+ E
Sbjct: 862 RGRNFQQILVALIHEVNIQPSEWHRSILLPQSWLGFMSRTYGAVLQGRQAELE 914
Score = 53 (23.7 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 27/95 (28%), Positives = 39/95 (41%)
Query: 1660 VQLSE--VVKKMQAKAKLVRIGSFPLTELGKLKAYILNF--KSLGVWDVLIEVVAA--LQ 1713
VQ+S+ + K + K L+ G PL L + + K VW L + +
Sbjct: 1571 VQISKNNMEKAIFTKVYLISQGRLPLKNLSVVIETSTGYYQKESIVWMFLHSFYHSRIVS 1630
Query: 1714 HAEEGV--RRQWLVDTIEISCVSCYPSTALQFVGL 1746
H GV R WL+D + Y ST +Q V L
Sbjct: 1631 HENTGVMKRMDWLLDLMGYIGNLAYTSTPVQNVDL 1665
Score = 51 (23.0 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 1389 LNTDNNIKADLLGSKSVSQRFSNDNVVMKLGLWLSH-LNYSGTDATARVVTVSTIL 1443
LN + IK L + +Q S+ N M LG+W++ L YS + T + + +S L
Sbjct: 1418 LNFGDEIKYLCL-ELAATQAQSSQNAAMLLGMWVAPPLVYSLSTKTQKYLFMSLSL 1472
Score = 49 (22.3 bits), Expect = 2.6e-09, Sum P(8) = 2.6e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 924 KAESIVPDRTFKAANDILKTLMRVAEESMPRSAENIALAIGA 965
K S+ PD A + +L++ +MPR + AL GA
Sbjct: 761 KLLSLTPDSVLGAFEEFATSLVKQEMTNMPRGVYHSALRGGA 802
Score = 45 (20.9 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 900 LLSLQSWKFFMQRWVRAIIMSIDAKAESIVPDRTFKAANDILK-TLM 945
LL+ + WK Q+++ +I +++ E++ K++ D+LK TL+
Sbjct: 1739 LLAKEPWKEQTQKFIDWLISMLESPKEALS-----KSSTDLLKVTLL 1780
Score = 44 (20.5 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 1769 LPVTLPSLLSKPGWETVAEPFMSYLWASTE 1798
LP ++ LL+K W+ + F+ +L + E
Sbjct: 1732 LPSSISLLLAKEPWKEQTQKFIDWLISMLE 1761
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 295 LVAQFELRLQYKPELSSVILYL---FSILIDSELEHEQLCILKFLLFLINWKSENE---- 347
L+ E+ L E SS+I + F +L E+ + CI+ L L+ +
Sbjct: 272 LICFCEVCLNVTGECSSLISLIEDNFELL--KEVFPVEQCIIGLALLLLQTPESQQKSIL 329
Query: 348 ---YGFGGATCDLSEE-LLLIFPILNLMSSPS 375
Y + ++S L+L+ P+L ++SS S
Sbjct: 330 SLAYKLFSSPENISATALVLVMPLLQILSSSS 361
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(8) = 3.1e-10
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 1166 KDLIVSWIPHVNSLVENYGSGGERSEIVLSVGSSLALPIIVAFCR 1210
K + W + EN S RS + SL +P+IV C+
Sbjct: 1017 KGQVFPWFYQKSYSGENTASAIARS--CAATALSLLVPVIVVSCK 1059
Score = 40 (19.1 bits), Expect = 3.8e-10, Sum P(8) = 3.8e-10
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 921 IDAKAESIVPDRTFKAANDILKTLMRV 947
I K+ESI + N++++TL ++
Sbjct: 1291 IQLKSESIQTSQFQSKLNEVIRTLTQI 1317
Score = 40 (19.1 bits), Expect = 2.5e-08, Sum P(7) = 2.5e-08
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 16 PSLQKFAVVSIFSKLRTSPAHLGPDSEPGRDAITQCLNSSS 56
P Q+ +++S+ KL +SP ++ + + Q L+SSS
Sbjct: 321 PESQQKSILSLAYKLFSSPENISATALVLVMPLLQILSSSS 361
Score = 39 (18.8 bits), Expect = 3.9e-09, Sum P(8) = 3.9e-09
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1411 NDNVVMKLGLWLSHLNYSGTDATARVVTVSTILRCL 1446
N ++ +GL LS L++S T V VS LR L
Sbjct: 1136 NTGCILGVGLVLSFLSHSSQ--TESRVHVSASLRKL 1169
>UNIPROTKB|Q5VW36 [details] [associations]
symbol:FOCAD "Focadhesin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR016024 GO:GO:0016021 SUPFAM:SSF48371 GO:GO:0005925
EMBL:CH471071 EMBL:AY139834 EMBL:AL392163 EMBL:AL445624
EMBL:AL662879 EMBL:AK000382 EMBL:AK056522 EMBL:AK172818
EMBL:AB058700 EMBL:BC001246 IPI:IPI00748360 RefSeq:NP_060264.3
UniGene:Hs.136247 ProteinModelPortal:Q5VW36 STRING:Q5VW36
PhosphoSite:Q5VW36 DMDM:74747342 PaxDb:Q5VW36 PRIDE:Q5VW36
Ensembl:ENST00000338382 Ensembl:ENST00000380249 GeneID:54914
KEGG:hsa:54914 UCSC:uc003zog.1 CTD:54914 GeneCards:GC09P020659
HGNC:HGNC:23377 MIM:614606 neXtProt:NX_Q5VW36 PharmGKB:PA134934777
eggNOG:NOG27815 HOVERGEN:HBG095600 InParanoid:Q5VW36 OMA:SCDTRPL
OrthoDB:EOG4WWRHQ GenomeRNAi:54914 NextBio:57970 Bgee:Q5VW36
CleanEx:HS_KIAA1797 Genevestigator:Q5VW36 InterPro:IPR021392
InterPro:IPR022542 Pfam:PF11229 Pfam:PF12530 Uniprot:Q5VW36
Length = 1801
Score = 152 (58.6 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 56/219 (25%), Positives = 97/219 (44%)
Query: 530 VPLLLAILFYSNMFTRKDVVCQNKLPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPV 589
VP L+ +L + + + + N + L LP + V I +++ I+ +L P
Sbjct: 486 VPNLIPVLMFK-LGRPLEPILYNDI---LYTLPKLGVHKVCIGQILR-IIQLL--GTTPR 538
Query: 590 LYATATRLLCQTWEINDRAFGSLQGVLQ----PKLLIDFKSERNICISIAASIHDVCRKD 645
L A RLL WE DR + LQ + P L + + + I+ AASI D+C++
Sbjct: 539 LRAVTLRLLTSLWEKQDRVYPELQRFMAVSDVPSLSVGKEVQWEKLIAKAASIRDICKQR 598
Query: 646 P-DRGVDLILSVAA----CIESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLDY 700
P G D++ +++ C + AL LQ L LC+A+V+ + W+ ++ L
Sbjct: 599 PYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPK-LSC 657
Query: 701 SLDPMLAQSLCILLRWG---AMDAEAYSEASRTVLKILW 736
P++ ++L L ++ Y VL LW
Sbjct: 658 DTRPLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLW 696
Score = 73 (30.8 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 52/229 (22%), Positives = 94/229 (41%)
Query: 127 HPFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFSDSLSSL 186
HP I +L R + +QQ+ F Q V + + PF + + L
Sbjct: 135 HPLITVLEHRPDCWPVFLQQLTAFFQQCPERLEVSCIQIMAPFLWYLYCEPSQLQEYAKL 194
Query: 187 FVRQL-VSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKEQRNLEFVLDCMVDSYIVV 245
+ L V + C ++ ++L+ C + +P K+ + + + + +
Sbjct: 195 RLALLKVLLQPQVLCDKDQPSILEQQILQLCCDIVPCLQVKDLIQTTEAMMFIEEVCLSL 254
Query: 246 LRHLVSNGLLVTEAQMSGMELLGTVLSL-YTSPFKQSGGV-EHIVEVLKH------VLVA 297
LRH V + +T QMS L + +SL T S + EH VE+LK V++
Sbjct: 255 LRHPVFWKIQLT--QMSLQLLCVSEVSLKITGECSSSIHLLEHSVELLKEDFPVELVIIG 312
Query: 298 QFELRL-----QYKPELSSVILYLFSILIDSELEHEQLCILKFLLFLIN 341
L L Q KP L+ + L L S+ D ++ L ++ +L +++
Sbjct: 313 IALLLLQTPASQQKPILN-LALKLLSVTEDQKIPKSSLLLVMPILQILS 360
Score = 70 (29.7 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 34/130 (26%), Positives = 53/130 (40%)
Query: 1660 VQLSEVVKKMQAKAKLVRIGSFPLTELGKLKAYILNFKSLGV--WDVLIEVVAA--LQHA 1715
V S + K K LV G FPL L + + + + V W +L + A + HA
Sbjct: 1574 VTKSNIEKAAFVKLYLVSQGRFPLVNLTDMLSVAVQHREKEVLAWMILHSLYQARIVSHA 1633
Query: 1716 EEGV--RRQWLVDTIEISCVSCYPSTALQFVGLLSGSCCRYMPFLILDSSTVLNDLPVTL 1773
GV R +WL++ + Y ST+ L + FL++ ++ V+ T
Sbjct: 1634 NTGVLKRMEWLLELMGYIRNVAYQSTSFHNTAL--DKALDF--FLLIFATAVVAWADHTA 1689
Query: 1774 PSLLS-KPGW 1782
P LL W
Sbjct: 1690 PLLLGLSASW 1699
Score = 54 (24.1 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 39/148 (26%), Positives = 60/148 (40%)
Query: 784 LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPG---SKIEKLLDIFPRVI---F 837
L+S T P+VL A+E F ++ E N R + + G S K + P I +
Sbjct: 762 LLSLTPPLVLPALEEFFTSLVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMY 821
Query: 838 SSDKKIYARE-LPGAALLCLS---FTRKD---LRNQGEARGLQNVLSGYENALIDIAASF 890
++K+ + L G L C + KD L +RG + AL+
Sbjct: 822 ETNKQPGLKPGLAGGMLFCYDVSMYQSKDGKPLNRLMASRGRSFKQTSL--ALVH-EVHI 878
Query: 891 QLSRNIFVALLSLQSWKFFMQRWVRAII 918
QLS A+ Q+W +M R AI+
Sbjct: 879 QLSE-WHRAIFLPQAWLAYMNRAYHAIL 905
Score = 49 (22.3 bits), Expect = 9.7e-08, Sum P(6) = 9.7e-08
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 1765 VLNDLPVTLPSLLSKPGWETVAEPFMSYLWASTE 1798
VL LP ++ LL K W+ + F+ +L++ E
Sbjct: 1729 VLTLLPNSMALLLQKEPWKEQTQKFIDWLFSIME 1762
Score = 48 (22.0 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 41/192 (21%), Positives = 83/192 (43%)
Query: 766 VSHIDKNILDFK--QRSFEI-LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPG 822
V H +K +L + ++ ++S N VL+ ME + ++++ + R +
Sbjct: 1608 VQHREKEVLAWMILHSLYQARIVSHANTGVLKRME-WLLELMGYI---RNVAYQSTSFHN 1663
Query: 823 SKIEKLLDIFPRVIFSSDKKIYARELPGAALLCLSFTRKDLRNQ-GEARGLQNVLSGYEN 881
+ ++K LD F +IF++ +A + LL LS + + G A + + L
Sbjct: 1664 TALDKALDFF-LLIFATAVVAWA-DHTAPLLLGLSASWLPWHQENGPAGPVPSFLGRSPM 1721
Query: 882 ALIDIAASFQLSRNIFVALLSLQSWKFFMQRWVRAIIMSIDAKAESIVPDRTFKAANDIL 941
+ + L N LL + WK Q+++ + +++ E++ + D+L
Sbjct: 1722 HRVTLQEVLTLLPNSMALLLQKEPWKEQTQKFIDWLFSIMESPKEALSAQ-----SRDLL 1776
Query: 942 K-TLM--RVAEE 950
K TL+ RV E
Sbjct: 1777 KATLLSLRVLPE 1788
Score = 44 (20.5 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 1405 VSQRFSNDNVVMKLGLWLSH-LNYSGTDATARVVTVSTIL 1443
V+Q S+ N LGLW++ L +S + T R + +S L
Sbjct: 1433 VTQAQSSQNAAALLGLWVTPPLIHSLSLNTKRYLLISAPL 1472
Score = 42 (19.8 bits), Expect = 1.1e-09, Sum P(6) = 1.1e-09
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 361 LLLIFPILNLMSS 373
LLL+ PIL ++SS
Sbjct: 349 LLLVMPILQILSS 361
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(6) = 1.4e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 924 KAESIVPDRTFKAANDILKTLMRVAEESMPRSAENIALAIGA 965
K S+ P A + +L++ +MPR + AL GA
Sbjct: 761 KLLSLTPPLVLPALEEFFTSLVKQEMVNMPRGIYHSALKGGA 802
Score = 37 (18.1 bits), Expect = 4.7e-09, Sum P(6) = 4.7e-09
Identities = 14/75 (18%), Positives = 29/75 (38%)
Query: 1486 LREECIQFSLAHANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLE 1545
+++ C++ + A + L P +L LN + LL IK S ++
Sbjct: 1424 IQQLCLEIMVTQAQSSQNAAALLGLWVTPPLIHSLSLNTKRYLLISAPLWIKHISDEQIL 1483
Query: 1546 KLFDDMADYLFSVTS 1560
+++ +F S
Sbjct: 1484 GFVENLMVAVFKAAS 1498
>UNIPROTKB|F1MQ56 [details] [associations]
symbol:FOCAD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 GO:GO:0005925 OMA:SCDTRPL
InterPro:IPR021392 InterPro:IPR022542 Pfam:PF11229 Pfam:PF12530
GeneTree:ENSGT00390000004438 EMBL:DAAA02022263 EMBL:DAAA02022264
EMBL:DAAA02022265 EMBL:DAAA02022266 IPI:IPI00924001
Ensembl:ENSBTAT00000061612 ArrayExpress:F1MQ56 Uniprot:F1MQ56
Length = 1808
Score = 153 (58.9 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 557 LLGMLPSIASQSVMIPLVVQTILPMLHKNAKPVLYATATRLLCQTWEINDRAFGSLQGVL 616
+L LP++ V I +++ ++ +L P L A RLL WE DR + LQ +
Sbjct: 509 ILYTLPTLGVHKVCIGQILR-VIQLL--GTTPQLKAVTLRLLTSLWEKQDRVYPELQRFM 565
Query: 617 Q----PKLLIDFKSERNICISIAASIHDVCRKDP-DRGVDLILSVAA----CIESRDPII 667
P L + + + I+ AASI D+C++ P G D++ +++ C +
Sbjct: 566 AMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPYQHGADMLAAISQVLNECTKPDQATP 625
Query: 668 QALGLQSLAYLCEADVIDFYTAWDVIAKHMLDYSLDPMLAQSLCILLRWG---AMDAEAY 724
AL LQ L LC+A+V+ + W+ ++ L P++ ++L L ++ Y
Sbjct: 626 AALVLQGLHALCQAEVVCIRSTWNALSPK-LSCDTRPLILKTLSELFSLVPSLTVNTAEY 684
Query: 725 SEASRTVLKILWD 737
VL LW+
Sbjct: 685 ENFKVQVLSFLWN 697
Score = 73 (30.8 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 35/170 (20%), Positives = 70/170 (41%)
Query: 126 NHP--FIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFSDSL 183
NHP I +L R + ++QQ+ F Q V + + PF + P
Sbjct: 132 NHPQPLITVLEHRPDCWPVILQQLTAFFQQCLERSEVSCIQIMAPFLWYLYCEPPQLQEY 191
Query: 184 SSLFVRQL-VSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKEQRNLEFVLDCMVDSY 242
+ L + L V + C ++ ++L+ C + +P K+ V+ + + Y
Sbjct: 192 AKLRLTLLKVLLKPRVPCDKEQPSILEQQILQLCCDMVPCLQIKDLIQTTEVMLFIEEVY 251
Query: 243 IVVLRHLVSNGLLVTEAQMSGMELLGTVLSLYTSPFKQSGGVEHIVEVLK 292
+ +LR+ V + +T+ + + + L++ +EH VE+LK
Sbjct: 252 LNLLRYPVFWKIQLTQLTLQLLCVCEVSLNITGECSSLIHLLEHSVELLK 301
Score = 64 (27.6 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 1661 QLSEVVKKMQAKAKLVRI-----GSFPLTELGKLKAYILNF--KSLGVWDVLIEVVAA-- 1711
+++++ + KA VR+ G FPL L + + + K W L + A
Sbjct: 1577 RVAQITESSLEKAAFVRLYLVSQGRFPLMGLTDVLSVAVQHREKDTLAWMTLHSLYQARI 1636
Query: 1712 LQHAEEGV--RRQWLVDTIEISCVSCYPSTALQFVGL 1746
+ HA GV R +WL++ + Y ST++Q V L
Sbjct: 1637 VSHANTGVLKRMEWLLELMGYIRNVAYQSTSVQNVAL 1673
Score = 54 (24.1 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 1769 LPVTLPSLLSKPGWETVAEPFMSYLWASTE 1798
LP ++P LL K W+ + F+ +L++ E
Sbjct: 1740 LPSSMPLLLQKEPWKEQTQKFIDWLFSIME 1769
Score = 50 (22.7 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 1486 LREECIQFSLAHANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLE 1545
+++ C++ + A + + L P L LN++ LL + IK S ++
Sbjct: 1431 IQQLCLEIMVTQAQSSQNVTTLLGMWVMPPLIHGLSLNIKKYLLLSVPSWIKHVSDEQIV 1490
Query: 1546 KLFDDMADYLFSVTSYQVYNPDQKSFLRVSFWNGLHHCLEEASLDSLEHIPNM-ERCMEV 1604
+ + +F S + +P+ LR S GL ++ S H+ ++
Sbjct: 1491 GFVESLMVAVFKAAS-PLSSPE----LRPSALQGLSQAMKLPSPS--HHLWSLLSEATRK 1543
Query: 1605 LFALLP 1610
+F LLP
Sbjct: 1544 IFDLLP 1549
Score = 45 (20.9 bits), Expect = 6.2e-07, Sum P(7) = 6.2e-07
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 533 LLAILFYSNMFTRKDVVCQNKLPKLLGMLPSIASQSVMI 571
L+A + N F+ K C N+ P L + S +V++
Sbjct: 24 LIAAVLKENSFSEKIHQCTNQTPALNLLWEKCCSDNVVV 62
Score = 43 (20.2 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 1154 YRAGKHDVVLKIKDLIVSWIPHVNSLVENYGSGGERSEIVLSVGSSLALPII 1205
+ AG H +L + + + I + L E+ G+ E+ LS+ S L ++
Sbjct: 717 FGAGDH-TILHLPEEVRPEIQTPDDLDEDEDEEGDEKEVDLSIPGSCYLKLL 767
Score = 42 (19.8 bits), Expect = 2.2e-08, Sum P(8) = 2.2e-08
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 1405 VSQRFSNDNVVMKLGLWL 1422
V+Q S+ NV LG+W+
Sbjct: 1440 VTQAQSSQNVTTLLGMWV 1457
Score = 40 (19.1 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 361 LLLIFPILNLMSS 373
LLL+ P+L ++SS
Sbjct: 349 LLLVMPLLQILSS 361
Score = 40 (19.1 bits), Expect = 3.4e-09, Sum P(8) = 3.4e-09
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 784 LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPG 822
L+S T VL A+E F ++ E N R V + G
Sbjct: 766 LLSLTALSVLPALEEFFTSLVKQEMVNMPRGVYHSALKG 804
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(8) = 1.8e-09
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 1404 SVSQRFSNDNVVMKLGLWLSHLNYSGTDATARVVTVSTILRCLT 1447
S+ + + ++ +GL LS +++SG T V V+ LR L+
Sbjct: 1136 SLEYKHPSTGCILGVGLVLSLMSHSGQ--TESRVHVAASLRKLS 1177
Score = 37 (18.1 bits), Expect = 4.2e-09, Sum P(8) = 4.2e-09
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 924 KAESIVPDRTFKAANDILKTLMRVAEES 951
K+E+I ++ N++++TL +V S
Sbjct: 1301 KSEAIQSSQSQGRLNEVIRTLTQVISVS 1328
>MGI|MGI:2676921 [details] [associations]
symbol:Focad "focadhesin" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005925 "focal
adhesion" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR016024 MGI:MGI:2676921 GO:GO:0016021
SUPFAM:SSF48371 GO:GO:0005925 EMBL:AL831756 CTD:54914
eggNOG:NOG27815 HOVERGEN:HBG095600 OMA:SCDTRPL OrthoDB:EOG4WWRHQ
InterPro:IPR021392 InterPro:IPR022542 Pfam:PF11229 Pfam:PF12530
EMBL:AK146138 EMBL:AK146256 EMBL:AK164030 EMBL:AL772316
EMBL:AL772296 EMBL:BX572638 EMBL:BC039622 EMBL:BC057079
IPI:IPI00420906 IPI:IPI00621499 IPI:IPI00881872
RefSeq:NP_001074653.1 UniGene:Mm.287210 PhosphoSite:A2AKG8
PaxDb:A2AKG8 PRIDE:A2AKG8 Ensembl:ENSMUST00000097992
Ensembl:ENSMUST00000107147 GeneID:230393 KEGG:mmu:230393
UCSC:uc008tmt.1 UCSC:uc008tmu.1 GeneTree:ENSGT00390000004438
HOGENOM:HOG000113178 InParanoid:A2AKG8 NextBio:379889 Bgee:A2AKG8
CleanEx:MM_BC057079 Genevestigator:A2AKG8 Uniprot:A2AKG8
Length = 1798
Score = 160 (61.4 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 64/256 (25%), Positives = 112/256 (43%)
Query: 530 VPLLLAILFYSNMFTRKDVVCQNKLPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPV 589
VP L+ +L + + D V N + L LP++ V + +++ ++ +L P
Sbjct: 486 VPNLIPVLMFK-LGRPLDPVSYNHI---LYTLPTLGVHKVCVGQILR-VIQLL--GTTPR 538
Query: 590 LYATATRLLCQTWEINDRAFGSLQGVLQ----PKLLIDFKSERNICISIAASIHDVCRKD 645
L A RLL WE DR + LQ + P L + + + I+ AASI D+C++
Sbjct: 539 LRAVTLRLLTSLWEKQDRVYPELQRFMAVSDAPSLSVGKELQWEKLIAKAASIRDICKQR 598
Query: 646 P-DRGVDLILSVAA----CIESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLDY 700
P G D++ +++ C + AL LQ L LC+A+V+ + W+ ++ L
Sbjct: 599 PYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPK-LSC 657
Query: 701 SLDPMLAQSLCILLRWG---AMDAEAYSEASRTVLKILWDTGTTTHLGHELQWAKARASA 757
+ P++ ++L L ++ Y VL LW T T A S
Sbjct: 658 DMRPLILKTLSELFSLVPSLTVNTVEYENFKVQVLSFLW-THTQNKNPTVASAAYKSLSH 716
Query: 758 FEALTQYEVSHIDKNI 773
F A ++ + H+ + I
Sbjct: 717 FSA-GEHTILHLPEKI 731
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 26/123 (21%), Positives = 46/123 (37%)
Query: 128 PFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFSDSLSSLF 187
P I +L R + L+QQ+ F Q + + PF + + + L
Sbjct: 136 PLITVLEHRPDCWPLLLQQLTAFFQQCPERSEASCVQIMAPFLWYLYCEPSQLEEYAKLR 195
Query: 188 VRQL-VSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKE-QRNLEFVLDCMVDSYIVV 245
+ L V C ++ L+ C LP K+ + E +L + + Y+ +
Sbjct: 196 LSLLKVLLQPRGVCEEAQLSVREQSTLQLCCSMLPCLQMKDLMQTTEMML-FVEEVYLSL 254
Query: 246 LRH 248
LRH
Sbjct: 255 LRH 257
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 39/159 (24%), Positives = 64/159 (40%)
Query: 784 LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPG---SKIEKLLDIFPRVI---F 837
L++ T P VL A+E F ++ E N R + + G S K + P I +
Sbjct: 759 LLTITAPSVLPALEEFFTSLVRQEMVNMPRGIYHSALKGGVRSDQGKTVAGIPNFILKTY 818
Query: 838 SSDKKIYARE-LPGAALLCLS---FTRKD---LRNQGEARGL---QNVLSGYENALIDIA 887
++K+ + L G L C + KD L +RG Q L+ + ++
Sbjct: 819 ETNKQPGLKPGLAGGMLFCYDLAMYQSKDGKPLNRLMASRGRSFKQTTLALIHEVHVQLS 878
Query: 888 ASFQLSRNIFVALLSLQSWKFFMQRWVRAIIMSIDAKAE 926
+ R IF+ Q+W +M R AI+ A+ E
Sbjct: 879 ---EWHRAIFLP----QAWLAYMTRAYHAILQGRIAELE 910
Score = 48 (22.0 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1765 VLNDLPVTLPSLLSKPGWETVAEPFMSYLWASTE 1798
VL LP ++ LL K W+ + F+ +L + E
Sbjct: 1726 VLTQLPRSMLLLLQKEPWKEQTQKFIDWLLSIME 1759
Score = 42 (19.8 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 1486 LREECIQFSLAHANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLE 1545
+++ C++ ++ A S L P L LN++ LL + K S +++
Sbjct: 1421 IQQLCLEIAVTQAPSSQSAASLLGLWVMPPLIHGLSLNIKKYLLVSMPLWAKHVSDEQIQ 1480
Query: 1546 KLFDDMADYLFSVTSYQVYNPD 1567
+++ +F S Q +P+
Sbjct: 1481 GFVENLMVEVFKTAS-QPCHPE 1501
Score = 40 (19.1 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 261 MSGMELLGTVLSLYTSPFKQSGGVEHIVEVLKHVLVAQFELRLQYKPELSSVILYLF-SI 319
M E++ V +Y S + G + + L L+ E+ L+ E SS+I L S+
Sbjct: 238 MQTTEMMLFVEEVYLSLLRHPGFWKSQLTQLTLQLLCICEVSLKITGECSSLIHLLERSV 297
Query: 320 LIDSELEHEQLCILKFLLFLINWKSENE---YGFGGATCDLSE-------ELLLIFPILN 369
+ E +L I+ L L+ + + L+E LLL+ P+L
Sbjct: 298 ELLGEDFPVELVIIGIALLLLQMPASQQKPLLNLALKLLSLTEGQKIPKASLLLLVPLLQ 357
Query: 370 LMSS 373
++SS
Sbjct: 358 ILSS 361
Score = 39 (18.8 bits), Expect = 6.5e-05, Sum P(7) = 6.5e-05
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 1601 CMEVLFALLPASQYAA-IIGV 1620
C+E+ P+SQ AA ++G+
Sbjct: 1425 CLEIAVTQAPSSQSAASLLGL 1445
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(7) = 3.5e-05
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 1689 LKAYILNFKSLGVWDVLIEVVAALQHAEEGVRRQWLV 1725
+K Y+++ L + + + AA+QH E+ W++
Sbjct: 1582 VKLYLVSQGRLPLMSLTDLLTAAMQHPEKETLA-WMI 1617
>RGD|1311849 [details] [associations]
symbol:Focad "focadhesin" species:10116 "Rattus norvegicus"
[GO:0005925 "focal adhesion" evidence=IEA;ISO] InterPro:IPR016024
RGD:1311849 SUPFAM:SSF48371 GO:GO:0005925 InterPro:IPR021392
InterPro:IPR022542 Pfam:PF11229 Pfam:PF12530
GeneTree:ENSGT00390000004438 IPI:IPI00765662
Ensembl:ENSRNOT00000058387 UCSC:RGD:1311849 ArrayExpress:F1LU27
Uniprot:F1LU27
Length = 1669
Score = 156 (60.0 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 530 VPLLLAILFYSNMFTRKDVVCQNKLPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPV 589
VP L+ +L + + D V N + L LP++ V + +++ ++ +L P
Sbjct: 357 VPHLIPVLMFK-LGRPLDPVSYNHI---LYTLPTLGVHKVCVGQILR-VIQLL--GTTPR 409
Query: 590 LYATATRLLCQTWEINDRAFGSLQGVLQ----PKLLIDFKSERNICISIAASIHDVCRKD 645
L A RLL WE DR + LQ + P L + + + I+ AASI D+C++
Sbjct: 410 LRAVTLRLLTSLWEKQDRVYPELQRFMAMSDAPSLSVGKELQWEKLIAKAASIRDICKQR 469
Query: 646 P-DRGVDLILSVAA----CIESRDPIIQALGLQSLAYLCEADVIDFYTAWDVIAKHMLDY 700
P G D++ +++ C + AL LQ L LC+A+V+ + W+ ++ L
Sbjct: 470 PYQHGADMLAAISQVLNECTKPDQASPAALVLQGLHALCQAEVVCIRSTWNALSPK-LSC 528
Query: 701 SLDPMLAQSLCILLRWG---AMDAEAYSEASRTVLKILW 736
+ P++ ++L L ++ Y VL LW
Sbjct: 529 DMRPLILKTLSELFSLVPSLTVNTVEYENFKVQVLTFLW 567
Score = 51 (23.0 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 25/123 (20%), Positives = 46/123 (37%)
Query: 128 PFIKILSSRNEVHTELVQQVLLFMTQNKHLGMVEVCEFLRPFFNFSILRMPFSDSLSSLF 187
P I +L R + L+QQ+ F Q + + PF + + L
Sbjct: 7 PLITVLEHRPDCWPLLLQQLTAFFQQCPERSEASCVQIMAPFLWYLYCEPSQLQEYAKLR 66
Query: 188 VRQL-VSSVASLCCSFPSDALPVFEVLRGCLEYLPLKNSKE-QRNLEFVLDCMVDSYIVV 245
+ L V C ++ ++L+ C +P K+ + E L + + Y+ +
Sbjct: 67 LSLLKVLLQPRGVCEEAQPSVLEQQILQLCCNMVPCLQMKDLMQTTEMTL-FVEEVYLSL 125
Query: 246 LRH 248
LRH
Sbjct: 126 LRH 128
Score = 50 (22.7 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 1765 VLNDLPVTLPSLLSKPGWETVAEPFMSYLWASTE 1798
VL LP ++ LL K W+ + F+ +L++ E
Sbjct: 1597 VLTLLPTSMLLLLQKEPWKEQTQKFIDWLFSIME 1630
Score = 49 (22.3 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 38/159 (23%), Positives = 64/159 (40%)
Query: 784 LISETNPVVLRAMEGFQVKIITHEHSNRRRFVKEKKVPG---SKIEKLLDIFPRVI---F 837
L++ T P +L A+E F ++ E N R + + G S K + P I +
Sbjct: 630 LLTITAPSILPALEEFFTSLVRQEMVNMPRGIYHSALKGGVCSDQGKTVAGIPNFILKTY 689
Query: 838 SSDKKIYARE-LPGAALLCLS---FTRKD---LRNQGEARGL---QNVLSGYENALIDIA 887
++K+ + L G L C + KD L +RG Q L+ + ++
Sbjct: 690 ETNKQPGLKPGLAGGMLFCYDVAMYQSKDGKPLNRLMASRGRTFKQTTLALVHEVHVQLS 749
Query: 888 ASFQLSRNIFVALLSLQSWKFFMQRWVRAIIMSIDAKAE 926
+ R IF+ Q+W +M R AI+ A+ E
Sbjct: 750 ---EWHRAIFLP----QAWLAYMTRAYHAILQGRIAELE 781
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 1601 CMEVLFALLPASQYAA-IIGV 1620
C+E+ + P+SQ AA ++G+
Sbjct: 1296 CLEIAVSQAPSSQSAAALLGL 1316
Score = 38 (18.4 bits), Expect = 3.6e-05, Sum P(6) = 3.6e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 361 LLLIFPILNLMSS 373
LLL+ P+L ++SS
Sbjct: 220 LLLLVPLLQILSS 232
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(6) = 5.4e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1404 SVSQRFSNDNVVMKLGLWL 1422
+VSQ S+ + LGLW+
Sbjct: 1300 AVSQAPSSQSAAALLGLWV 1318
Score = 37 (18.1 bits), Expect = 6.7e-05, Sum P(6) = 6.7e-05
Identities = 15/82 (18%), Positives = 36/82 (43%)
Query: 1486 LREECIQFSLAHANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRLE 1545
+++ C++ +++ A + L P L LN++ LL + K S +++
Sbjct: 1292 IQQLCLEIAVSQAPSSQSAAALLGLWVMPPLVHGLSLNIKKYLLVSMPLWAKHVSDEQIQ 1351
Query: 1546 KLFDDMADYLFSVTSYQVYNPD 1567
+++ +F S Q +P+
Sbjct: 1352 GFVENLMVAVFKPAS-QPCHPE 1372
>DICTYBASE|DDB_G0293192 [details] [associations]
symbol:DG1098 "armadillo-like helical
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR016024
dictyBase:DDB_G0293192 GenomeReviews:CM000155_GR SUPFAM:SSF48371
GO:GO:0030587 EMBL:AAFI02000200 InterPro:IPR022542 Pfam:PF12530
RefSeq:XP_629216.1 EnsemblProtists:DDB0220119 GeneID:8629095
KEGG:ddi:DDB_G0293192 InParanoid:Q54C50 OMA:IETTIEC Uniprot:Q54C50
Length = 2043
Score = 130 (50.8 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 632 ISIAASIHDVCRKDPDRGVDLI--LSVAACIESRDPIIQALGLQSLAYLCEADVIDFYTA 689
IS A +I ++C D + G +LI LS C + DP I ++ L++L+ LCE +++ F +A
Sbjct: 733 ISAAITIKEICEFDSNLGQELIQPLSQFLC-KDNDPTILSISLEALSSLCENEILSFTSA 791
Query: 690 WDVIAKHM---LDYSLDPMLAQSLCILL----RWGAMDAEAYSEASRTVLKILWD 737
W+VI K++ + D LC LL R G D + + I+ D
Sbjct: 792 WNVIKKNLGQEESFEQDKRSPMVLCSLLDFFSRGGVCDLRGEQNLEQKTIDIISD 846
Score = 82 (33.9 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 60/321 (18%), Positives = 122/321 (38%)
Query: 1252 CVGAGSLLACIFNEGAHSLNVDYVNAFLELFRKCYSNPYPPIIHXXXXXXXXXXXXXXXX 1311
C+G +L+ + ++G ++ + L K ++ +
Sbjct: 1391 CIGYNNLIQILLSKGFTGFDLSMIQQLLISNNKIMNDA-----NNNYSTNVIINSVISTS 1445
Query: 1312 YLIHVDPLNSSMRAGYAQKEHPYTLGPLFSDPVCEQHVTSLMQEMFLVAQTSDDHQLQQY 1371
LI L S + + L + S+P + SL+ E ++ S+ +
Sbjct: 1446 ILIGSPILTQSSQVLFESSLESSVLNFINSNPNSRKEFQSLLNE--IIISMSNLFKSPNT 1503
Query: 1372 AAWAMSFLRCHLWSKELLNTDNNIKADLLGSKSVS-QRFSNDNVVMKLGLWLSHLNYSGT 1430
+ + ++ L S L T NN L G + + SND ++ L L S T
Sbjct: 1504 DSKLIRYISICLGSITLSTTYNNNNNGLSGGEPENFDHLSNDLLIKALFNTLIDSTTSST 1563
Query: 1431 DATARVVTVSTILRCLTR-----APRLPTLDWGAIIRCCMRYEAQIAKGLPPDSAYKRGI 1485
+ TV + LR L + + +LP ++W II+ Y S ++ I
Sbjct: 1564 LNDLNLTTVESCLRILNQLNQNDSIKLPIVNWSTIIKRI--Y-----------SKFRDNI 1610
Query: 1486 -LREECIQFSLAHANQFHPLLSFLDELSDLPRFKTLELNLQATLLFHLADLIKLFSGSRL 1544
++++CI F ++ + L + E L F + ++Q L+ L ++ S R+
Sbjct: 1611 NIKKQCITF-VSKNIKLSTLSIVMSEWLSLSNFNSESQSIQLKLIKSLPLVLNQLSPIRV 1669
Query: 1545 EKLFDDMADYLFSVTSYQVYN 1565
+FD++ + + ++N
Sbjct: 1670 NSIFDEIISNIILNDPFLIWN 1690
Score = 42 (19.8 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 533 LLAILFYSNMFTRKDVVCQNKLPKLLGMLPSIASQSV----MIPL 573
L LFY F +++ + K + +LPSI S+ +IPL
Sbjct: 562 LSPFLFYK--FNQQNEIASEIRIKTIHLLPSICRNSIESISLIPL 604
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 304 QYKPELSSVILYLFSILIDSELEHE 328
+++ + S+I YL ++ I E E
Sbjct: 268 EFQKSILSIIYYLMNVFISGFNEKE 292
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 302 RLQY-KPELSSVILYLFSILIDSELEHEQL 330
R ++ KP +S+++L + + +++ L H L
Sbjct: 170 RFEFLKPLVSNLLLNINELPLETSLLHNSL 199
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1860 1781 0.00093 125 3 11 22 0.49 33
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 641 (68 KB)
Total size of DFA: 721 KB (2309 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 154.00u 0.12s 154.12t Elapsed: 00:00:09
Total cpu time: 154.00u 0.12s 154.12t Elapsed: 00:00:09
Start: Fri May 10 10:25:46 2013 End: Fri May 10 10:25:55 2013