BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000208
(1857 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449459058|ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
Length = 1833
Score = 2143 bits (5553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1108/1870 (59%), Positives = 1360/1870 (72%), Gaps = 60/1870 (3%)
Query: 9 VGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLDLSKDAI-----KEGQK 63
+ S+ SSL SF+ VPP A+P +LDC+ STG S+S +F SLL+ I KEG K
Sbjct: 1 MASVFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEG-K 59
Query: 64 LDSDQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEV 123
LD+DQCNYI S+V ALCH+LK GA+ A +SF+WKSF+PL+ E+
Sbjct: 60 LDADQCNYITSLVCALCHILKK--------DGADPTALKSFIWKSFVPLINKTATLNREM 111
Query: 124 LNQISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSK 183
LNQ+SESF DVVT+TN+W +E TL+P SS +S VLQ+ E D E S GS
Sbjct: 112 LNQVSESFIDVVTETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSN 171
Query: 184 GETNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCY-AEKF 242
+ MD + M + LP +CH+L +++D+ L N Q ++D ++ NG AE+F
Sbjct: 172 VPVHEPRMDNQTMKDYG-FLQLPLACHVLAIMLDAVLCNRQVPQTSDKVVSNGYQKAEEF 230
Query: 243 AANLLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCF 302
L+W +CN++E++LLQS +HRSCAI LLP+I +A +S S EIS GH LSR CF
Sbjct: 231 TVKLIWDICNLSEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCF 290
Query: 303 FKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFW 362
KIWKCC+ LFS GTLERRDA+ +LSLY + + E + D GEEFDI+A + FW
Sbjct: 291 LMKIWKCCKKLFSFGTLERRDAYRILSLYFCFFPHNEELGGAGMCDDGEEFDIKADKIFW 350
Query: 363 EEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWA 422
+EIKRGLVD+E VRKQSLHILK L G + VS S GK+S +G+TKR+ WA
Sbjct: 351 DEIKRGLVDKESSVRKQSLHILKKALSKNGRGSP-TTVSKTISSGKDSNVQGITKRERWA 409
Query: 423 VKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFS 482
KEAKSLGVG++C +A QQ+WEAFILLYEMLEEY +HLVEAAW+HQI+LLLQ
Sbjct: 410 NKEAKSLGVGQICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHP 469
Query: 483 LPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYE 542
+ S+G HQN I+ SGEI+ WLS+LW RGF H NP VR +IMQ FL IEW+
Sbjct: 470 TSTEFDSFSSG-VHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKV 528
Query: 543 NCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIA 602
C KS+PE+F++GPF+E LNDPV HKDFG KG+YSS+T+E AA F+ QY + LD R ++
Sbjct: 529 PCLKSLPETFIIGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVV 588
Query: 603 FLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECC-GDAFPEKVPEECSPE 661
FL L S+A+++SFGRVGL++L+ECIASAA V + EC G + + E+ P
Sbjct: 589 FLHQLTSLARKKSFGRVGLISLSECIASAASIVGFDYNIEGECFNGSSLSSQ--EDLIPY 646
Query: 662 NFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASLMCTF 721
+ C K +LLD LRFV+ESSKQHFNP+YRL+ VC K LEAAAS++CT
Sbjct: 647 SLEC--KLELLDDLRFVVESSKQHFNPSYRLQ------------VCAKALEAAASVLCTS 692
Query: 722 EVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLNDFPI 781
+ LE++LHF+SALPRE TDYGG LR +++ WL GC K+ C + +KSL +FP
Sbjct: 693 NLALEVVLHFVSALPREATDYGGCLRRKMQNWLLGCGKK----CCSTETKFMKSLIEFPK 748
Query: 782 SFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICK 841
F +H S+A VT DDE+L++WE +AKRWARV FL +K E L +L FI N G+NICK
Sbjct: 749 RFVTHNHSSDASVTYDDEELEAWECEAKRWARVVFLAVKKEHHLKSILTFIHNYGLNICK 808
Query: 842 QSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSL---KTVDQFSYAEA 898
Q + I +KFLIL + +QE+Q++Q++ C KSE D L + D SYAE
Sbjct: 809 QKGDLEGIRVKFLILIMTLVQELQLVQQQIGHCDY----KSEFDDLTMSQPSDNLSYAEP 864
Query: 899 SIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFST 958
+IF +K+ NL P++ ELV F+ +SCSIFWSN+ +ET LP SV GKLGGPSQRRL S
Sbjct: 865 TIFSQKIVNLLPSLQVELVSFATMSCSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSV 924
Query: 959 TTVVLQAIMSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCL 1018
T+VL A+ S KAVASI S C + + S +F+ KT+ SP SESGAE+CL
Sbjct: 925 ATLVLLAVTSTKAVASIMSCCRQFQILCSSNSGVEFLLTFLLKTVSSPVYHSESGAEICL 984
Query: 1019 AAYEALASALKALVG---PQALCFFKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAG 1075
A YEALAS L+ LV +AL F + + VEG+PLLDS + F Q++N +L AG
Sbjct: 985 ATYEALASVLQVLVSEFSSEALRFVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAG 1044
Query: 1076 VLARARRAILLNWKWLCLESLLSLPYCGLENGANC---SYFFSDDVVRYIFNDLVESLEN 1132
VL R RRA+LL WKW CLESLLS+PYC L+NG + + F S+ + IFNDLVESLEN
Sbjct: 1045 VLVRTRRAVLLKWKWHCLESLLSIPYCALQNGISLEDNNAFLSEATLLQIFNDLVESLEN 1104
Query: 1133 AGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVA 1192
AGE S+LPMLR VRL L LF G+SG LV+SC GV+++MMW LV SSWILH+SCNKRRVA
Sbjct: 1105 AGESSVLPMLRLVRLILCLFYKGNSGLLVTSCNGVNSEMMWRLVHSSWILHVSCNKRRVA 1164
Query: 1193 PIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWL 1252
IA LLSSVLH S FSE MH+ + PGPLKWF+EK+LEEGTKSPRT RLAALHLTG+WL
Sbjct: 1165 HIAVLLSSVLHSSAFSEINMHLSDGGPGPLKWFIEKILEEGTKSPRTFRLAALHLTGMWL 1224
Query: 1253 TNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINT 1312
++PW IKYY+KELKLL+LYGS+AFDEDFEAEL + +D +TEVSLLA+SP PELTE FINT
Sbjct: 1225 SHPWTIKYYLKELKLLSLYGSIAFDEDFEAELTD-HDTQTEVSLLAESPDPELTEVFINT 1283
Query: 1313 ELYARVSVAVLFSKLAD--QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
ELYARVSVA LF KLAD E+ C DA++SG+LFLL LLD VVN DLA+ELYK
Sbjct: 1284 ELYARVSVATLFHKLADLAMVELSNEYGSCYDAVESGRLFLLELLDSVVNSNDLAKELYK 1343
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYL 1430
K+SAIHRRK+RAWQM+CILSRFV DI+ QVT+ LH+ L +NNLPSVRQYLETFAI+IYL
Sbjct: 1344 KHSAIHRRKIRAWQMMCILSRFVCEDIIQQVTNSLHVCLSKNNLPSVRQYLETFAISIYL 1403
Query: 1431 KFPSLVAEQLVPILRDYDMRPQA----LSSYVFIAANVILHASKAVQFRHLEDLLPPIVP 1486
KFP+LV EQLVPIL+DY+M+PQ LSSYVFIA NVILHA++ VQ HL++LLP +VP
Sbjct: 1404 KFPTLVKEQLVPILQDYNMKPQVTISVLSSYVFIATNVILHANEDVQSSHLDELLPSLVP 1463
Query: 1487 LLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLR 1546
LTSHHHSLRGFTQLLVY VLCK FP + F + MPLEK CFEDLKSYL KN DC RLR
Sbjct: 1464 QLTSHHHSLRGFTQLLVYHVLCKFFPAMKFRPTGYMPLEKRCFEDLKSYLEKNPDCVRLR 1523
Query: 1547 ASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKD 1606
ASM GYL AY+P S+TP+ IF +R K+L FECVPTSLMEQVLNFLNDVREDLR SMA D
Sbjct: 1524 ASMEGYLHAYNPVSSVTPSGIFSSRVKDL-FECVPTSLMEQVLNFLNDVREDLRCSMAND 1582
Query: 1607 VVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSF 1666
+ IKNES K E + SD+++E S S+LP + LDFQKK+TL KHE +D +SS+
Sbjct: 1583 LTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVATSLDFQKKVTLSKHEKKDTETSSY 1642
Query: 1667 FGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLART 1726
G++EAYK L E+E ED+L +Q+L +RSL+ME +R +RQ +LVASL+DRIPNLAGLART
Sbjct: 1643 LGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRTNRQDIILVASLLDRIPNLAGLART 1702
Query: 1727 CEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGL 1786
CEVFKASGLAIAD N+L+DKQFQLISVTAEKWVPIVEVPVNS+K FLE+KK EGFS+LGL
Sbjct: 1703 CEVFKASGLAIADLNVLNDKQFQLISVTAEKWVPIVEVPVNSMKLFLEKKKREGFSILGL 1762
Query: 1787 EQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAI 1846
EQTANS+PLDQY FPKKTVLVLGREKEGIPVDIIH+LDAC+EIPQLGVVRSLNVHVSGAI
Sbjct: 1763 EQTANSVPLDQYAFPKKTVLVLGREKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAI 1822
Query: 1847 ALWEYTRQQR 1856
ALWEYTRQQR
Sbjct: 1823 ALWEYTRQQR 1832
>gi|449510499|ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
Length = 1833
Score = 2141 bits (5547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1107/1870 (59%), Positives = 1359/1870 (72%), Gaps = 60/1870 (3%)
Query: 9 VGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLDLSKDAI-----KEGQK 63
+ S+ SSL SF+ VPP A+P +LDC+ STG S+S +F SLL+ I KEG K
Sbjct: 1 MASVFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEG-K 59
Query: 64 LDSDQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEV 123
LD+DQCNYI S+V ALCH+LK GA+ A +SF+WKSF+PL+ E+
Sbjct: 60 LDADQCNYITSLVCALCHILKK--------DGADPTALKSFIWKSFVPLINKTATLNREM 111
Query: 124 LNQISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSK 183
LNQ+SESF DVVT+TN+W +E TL+P SS +S VLQ+ E D E S GS
Sbjct: 112 LNQVSESFIDVVTETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSN 171
Query: 184 GETNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCY-AEKF 242
+ MD + M + LP +CH+L +++D+ L N Q ++D ++ NG AE+F
Sbjct: 172 VPVHEPRMDNQTMKDYG-FLQLPLACHVLAIMLDAVLCNRQVPQTSDKVVSNGYQKAEEF 230
Query: 243 AANLLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCF 302
L+W +CN++E++LLQS +HRSCAI LLP+I +A +S S EIS GH LSR CF
Sbjct: 231 TVKLIWDICNLSEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCF 290
Query: 303 FKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFW 362
KIWKCC+ LFS GTLERRDA+ +LSLY + + E + D GEEFDI+A + FW
Sbjct: 291 LMKIWKCCKKLFSFGTLERRDAYRILSLYFCFFPHNEELGGAGMCDDGEEFDIKADKIFW 350
Query: 363 EEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWA 422
+EIKRGLVD+E VRKQSLHILK L G + VS S GK+S +G+TKR+ WA
Sbjct: 351 DEIKRGLVDKESSVRKQSLHILKKALSKNGRGSP-TTVSKTISSGKDSNVQGITKRERWA 409
Query: 423 VKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFS 482
KEAKSLGVG++C +A QQ+WEAFILLYEMLEEY +HLVEAAW+HQI+LLLQ
Sbjct: 410 NKEAKSLGVGQICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHP 469
Query: 483 LPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYE 542
+ S+G HQN I+ SGEI+ WLS+LW RGF H NP VR +IMQ FL IEW+
Sbjct: 470 TSTEFDSFSSG-VHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKV 528
Query: 543 NCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIA 602
C KS+PE+F++GPF+E LNDPV HKDFG KG+YSS+T+E AA F+ QY + LD R ++
Sbjct: 529 PCLKSLPETFIIGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVV 588
Query: 603 FLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECC-GDAFPEKVPEECSPE 661
FL L S+A+++SFGRVGL++L+ECIASAA V + EC G + + E+ P
Sbjct: 589 FLHQLTSLARKKSFGRVGLISLSECIASAASIVGFDYNIEGECFNGSSLSSQ--EDLIPY 646
Query: 662 NFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASLMCTF 721
+ C K +LLD LRFV+ESSKQHFNP+Y L+ VC K LEAAAS++CT
Sbjct: 647 SLEC--KLELLDDLRFVVESSKQHFNPSYLLQ------------VCAKALEAAASVLCTS 692
Query: 722 EVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLNDFPI 781
+ LE++LHF+SALPRE TDYGG LR +++ WL GC K+ C + +KSL +FP
Sbjct: 693 NLALEVVLHFVSALPREATDYGGCLRRKMQNWLLGCGKK----CCSTETKFMKSLIEFPK 748
Query: 782 SFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICK 841
F +H S+A VT DDE+L++WE +AKRWARV FL +K E L +L FI N G+NICK
Sbjct: 749 RFVTHNHSSDASVTYDDEELEAWECEAKRWARVVFLAVKKEHHLKSILTFIHNYGLNICK 808
Query: 842 QSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSL---KTVDQFSYAEA 898
Q + I +KFLIL + +QE+Q++Q++ C KSE D L + D SYAE
Sbjct: 809 QKGDLEGIRVKFLILIMTLVQELQLVQQQIGHCDY----KSEFDDLTMSQPSDNLSYAEP 864
Query: 899 SIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFST 958
+IF +K+ NL P++ ELV F+ +SCSIFWSN+ +ET LP SV GKLGGPSQRRL S
Sbjct: 865 TIFSQKIVNLLPSLQVELVSFATMSCSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSV 924
Query: 959 TTVVLQAIMSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCL 1018
T+VL A+ S KAVASI S C + + S +F+ KT+ SP SESGAE+CL
Sbjct: 925 ATLVLLAVTSTKAVASIMSCCRQFQILCSSNSGVEFLLTFLLKTVSSPVYHSESGAEICL 984
Query: 1019 AAYEALASALKALVG---PQALCFFKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAG 1075
A YEALAS L+ LV +AL F + + VEG+PLLDS + F Q++N +L AG
Sbjct: 985 ATYEALASVLQVLVSEFSSEALRFVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAG 1044
Query: 1076 VLARARRAILLNWKWLCLESLLSLPYCGLENGANC---SYFFSDDVVRYIFNDLVESLEN 1132
VL R RRA+LL WKW CLESLLS+PYC L+NG + + F S+ + IFNDLVESLEN
Sbjct: 1045 VLVRTRRAVLLKWKWHCLESLLSIPYCALQNGISLEDNNAFLSEATLLQIFNDLVESLEN 1104
Query: 1133 AGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVA 1192
AGE S+LPMLR VRL L LF G+SG LV+SC GV+++MMW LV SSWILH+SCNKRRVA
Sbjct: 1105 AGESSVLPMLRLVRLILCLFYKGNSGLLVTSCNGVNSEMMWRLVHSSWILHVSCNKRRVA 1164
Query: 1193 PIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWL 1252
IA LLSSVLH S FSE MH+ + PGPLKWF+EK+LEEGTKSPRT RLAALHLTG+WL
Sbjct: 1165 HIAVLLSSVLHSSAFSEINMHLSDGGPGPLKWFIEKILEEGTKSPRTFRLAALHLTGMWL 1224
Query: 1253 TNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINT 1312
++PW IKYY+KELKLL+LYGS+AFDEDFEAEL + +D +TEVSLLA+SP PELTE FINT
Sbjct: 1225 SHPWTIKYYLKELKLLSLYGSIAFDEDFEAELTD-HDTQTEVSLLAESPDPELTEVFINT 1283
Query: 1313 ELYARVSVAVLFSKLAD--QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
ELYARVSVA LF KLAD E+ C DA++SG+LFLL LLD VVN DLA+ELYK
Sbjct: 1284 ELYARVSVATLFHKLADLAMVELSNEYGSCYDAVESGRLFLLELLDSVVNSNDLAKELYK 1343
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYL 1430
K+SAIHRRK+RAWQM+CILSRFV DI+ QVT+ LH+ L +NNLPSVRQYLETFAI+IYL
Sbjct: 1344 KHSAIHRRKIRAWQMMCILSRFVCEDIIQQVTNSLHVCLSKNNLPSVRQYLETFAISIYL 1403
Query: 1431 KFPSLVAEQLVPILRDYDMRPQA----LSSYVFIAANVILHASKAVQFRHLEDLLPPIVP 1486
KFP+LV EQLVPIL+DY+M+PQ LSSYVFIA NVILHA++ VQ HL++LLP +VP
Sbjct: 1404 KFPTLVKEQLVPILQDYNMKPQVTISVLSSYVFIATNVILHANEDVQSSHLDELLPSLVP 1463
Query: 1487 LLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLR 1546
LTSHHHSLRGFTQLLVY VLCK FP + F + MPLEK CFEDLKSYL KN DC RLR
Sbjct: 1464 QLTSHHHSLRGFTQLLVYHVLCKFFPAMKFRPTGYMPLEKRCFEDLKSYLEKNPDCVRLR 1523
Query: 1547 ASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKD 1606
ASM GYL AY+P S+TP+ IF +R K+L FECVPTSLMEQVLNFLNDVREDLR SMA D
Sbjct: 1524 ASMEGYLHAYNPVSSVTPSGIFSSRVKDL-FECVPTSLMEQVLNFLNDVREDLRCSMAND 1582
Query: 1607 VVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSF 1666
+ IKNES K E + SD+++E S S+LP + LDFQKK+TL KHE +D +SS+
Sbjct: 1583 LTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVATSLDFQKKVTLSKHEKKDTETSSY 1642
Query: 1667 FGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLART 1726
G++EAYK L E+E ED+L +Q+L +RSL+ME +R +RQ +LVASL+DRIPNLAGLART
Sbjct: 1643 LGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRTNRQDIILVASLLDRIPNLAGLART 1702
Query: 1727 CEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGL 1786
CEVFKASGLAIAD N+L+DKQFQLISVTAEKWVPIVEVPVNS+K FLE+KK EGFS+LGL
Sbjct: 1703 CEVFKASGLAIADLNVLNDKQFQLISVTAEKWVPIVEVPVNSMKLFLEKKKREGFSILGL 1762
Query: 1787 EQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAI 1846
EQTANS+PLDQY FPKKTVLVLGREKEGIPVDIIH+LDAC+EIPQLGVVRSLNVHVSGAI
Sbjct: 1763 EQTANSVPLDQYAFPKKTVLVLGREKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAI 1822
Query: 1847 ALWEYTRQQR 1856
ALWEYTRQQR
Sbjct: 1823 ALWEYTRQQR 1832
>gi|15236590|ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
gi|332658520|gb|AEE83920.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
Length = 1850
Score = 2011 bits (5211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1075/1881 (57%), Positives = 1354/1881 (71%), Gaps = 70/1881 (3%)
Query: 11 SLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLD----LSKDAIKEGQKLDS 66
S+++SL SFK VPPAAIP LDC+L+STG S S +F SL++ +D + ++ DS
Sbjct: 4 SVITSLSLSFKQVPPAAIPAFLDCVLSSTGVSPSTLFESLIEQFPFRLEDTVNGDKRFDS 63
Query: 67 DQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVLNQ 126
D CN+IAS+V LCHLLK G F+A NH+A Q F+W+ FIPLMKM A++ ++LN+
Sbjct: 64 DDCNHIASLVAGLCHLLKNFG----FVAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNK 119
Query: 127 ISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKGET 186
I ESFFDVV +TN L +LVP + SVGFS+G+ Q+EESD I+WG +
Sbjct: 120 IVESFFDVVIETNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFIKWGDLCL----RDSL 175
Query: 187 NASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCYAEKFAANL 246
N DMD+ + LS S +P SCH+L L++++A ++ QAAP +S FAA +
Sbjct: 176 NTIDMDENYIAQLSGSFPIPLSCHLLNLILNAAFQSHQAAPKVES----------FAAGM 225
Query: 247 LWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFFKKI 306
LW LCN TERLL QSVEHRSCA++FLLP I KAF S S +IS G+++ILSR F K+I
Sbjct: 226 LWDLCNTTERLLSQSVEHRSCAVSFLLPAIFKAFSSQSSLKISHQGNLFILSRNGFIKRI 285
Query: 307 WKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFWEEIK 366
W+CC+ LFS+G++ERRDA++VLSL LS S+T+G+E+ +FD+R+ +EFW+EIK
Sbjct: 286 WECCKKLFSVGSIERRDAYSVLSLCLSSGSWTDGTESFVSEKDAVQFDLRSEQEFWDEIK 345
Query: 367 RGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWAVKEA 426
GLV +E LVRKQSLHILK+VL I ++ +S+ + +G NS R MT+++ WA KEA
Sbjct: 346 IGLVVDESLVRKQSLHILKSVLSIIEVSET---ISEKKPEG-NSVNRSMTRKETWAEKEA 401
Query: 427 KSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFSLPHD 486
KSLGVG+L S D L QQ W+AF+LLYEMLEEY THLVEAAW++QI LL++ SL +D
Sbjct: 402 KSLGVGELYGSVDSGLT-SQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYD 460
Query: 487 N-LPGSTGRAHQNWIKPSGE---IFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYE 542
L +H ++ E IF+WL VLW RGF H NP VR +M+SF GIEW+ Y+
Sbjct: 461 GTLKSDCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYK 520
Query: 543 NCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIA 602
C +S+ ++F+LGPF+EGLNDP HHKDFG KG+Y+SRTIE AA ++ Y S L+ R ++
Sbjct: 521 TCTQSMSQTFVLGPFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVSAYTSCLNPRNRVG 580
Query: 603 FLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEECSPEN 662
FL NLAS+AK+QSF R G MAL +CI S A V + + + D F +E S +
Sbjct: 581 FLINLASLAKKQSFCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKF-SGTAQESSCGH 639
Query: 663 FPCNDKSDLLDFLRFVIESSKQHFNPNYRLRG----YSFWQFKLW-----FPVCEKVLEA 713
+D + +LD L+FV ESS+QHFN YR+R + +F L F V +KVLE
Sbjct: 640 LSQDDMTHILDVLKFVAESSRQHFNHKYRIRASLTILNTLKFLLLIVLFHFLVYQKVLET 699
Query: 714 AASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVL 773
AAS++ VPL LL F+SA+PREFTD+ G LR + EWL GC+++ S + C +L
Sbjct: 700 AASVVNPCNVPLGTLLQFVSAIPREFTDHDGLLRKMMLEWLQGCNRKTSNSLCTDGTRLL 759
Query: 774 KSLNDFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQ 833
SL ++ FTS + + DDEDL++W+S+ KRWARVFFL+I E+ L ++ F+Q
Sbjct: 760 ASLYEYLKGFTS-----DNVESFDDEDLEAWDSQTKRWARVFFLMINKEEHLTDIIMFVQ 814
Query: 834 NGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVDQF 893
N G++ ++ NH++ KFLI L+ L E+Q MQ+ SE +++KS I S + +
Sbjct: 815 NNGLSFFQEKNHLKRAPAKFLIFILSMLLELQNMQDGISELSSSVKSKSGIGSDEQTGKQ 874
Query: 894 SYAEASIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRR 953
+AS +K A + ++L+EL+ F++ SCSIFWS+ +E LP SVIGKLGGPSQRR
Sbjct: 875 IVVDASSIKKKFAVVLLSILKELIPFADSSCSIFWSHTTVENGALPGSVIGKLGGPSQRR 934
Query: 954 LSFSTTTVVLQAIMSVKAVASISSWCARLKRN-ASIEFAYDFMWNLFWKTIQSPTSDSES 1012
LS TTT VL+A++SVK + ISS+CA+ ++ A F W TI S +SE+
Sbjct: 935 LSVPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALAFFWKFTQHTISSQICNSEA 994
Query: 1013 GAEVCLAAYEALASALKALVGPQALCFFK--KNDKLMLSAVEGKPLLDSWVQAFLQNINA 1070
AE+ LAA+EALAS L A V + F +ND +LS V+G+ L V AF++NIN
Sbjct: 995 AAEIYLAAFEALASVLNAFVSLCSAGAFNLLENDSTLLSMVDGEFWLQVSVPAFVRNINH 1054
Query: 1071 LLAAGVLARARRAILLNWKWLCLESLLSLPYC--GLENGANCSYFFSDDVVRYIFNDLVE 1128
LL AGVL R+RRA+LL+WKWLC+ESLLS+ + + FFSDD V+ IF D+VE
Sbjct: 1055 LLTAGVLVRSRRAVLLSWKWLCVESLLSVMHILDARRIPEDRKSFFSDDTVKSIFQDIVE 1114
Query: 1129 SLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNK 1188
SLENAGEGS LPML+SVRL L + ASG S + GVDTQ MW LV+S WILHISC K
Sbjct: 1115 SLENAGEGSALPMLKSVRLALGILASGKSS--LDGFSGVDTQTMWQLVKSCWILHISCKK 1172
Query: 1189 RRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLT 1248
RRVAPIAALLSSVLH S+FS ++MH+ E+ GPLKWFVEKVLEEG KSPRTIRLAALHL+
Sbjct: 1173 RRVAPIAALLSSVLHSSLFSNKDMHITEDEHGPLKWFVEKVLEEGQKSPRTIRLAALHLS 1232
Query: 1249 GLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEA 1308
GLWL P IKYYIKEL+LLTLYGSVAFDEDFEAEL++N DA+TEVSLLAKSP PELTE
Sbjct: 1233 GLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPDPELTEL 1292
Query: 1309 FINTELYARVSVAVLFSKLADQTEIVGSA---KECQDALDSGKLFLLGLLDFVVNDKDLA 1365
FINTELYARVSVA LF KLA+ +V A ++CQDAL +GKLFLL LLD V+DKDLA
Sbjct: 1293 FINTELYARVSVAGLFQKLANLAYMVEPASQNQDCQDALVAGKLFLLELLDAAVHDKDLA 1352
Query: 1366 RELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLY--------RNNLPSV 1417
+ELYKKYSAIHRRK+RAWQMICI+SRFV NDIVGQV +HI L+ RNNLP+V
Sbjct: 1353 KELYKKYSAIHRRKIRAWQMICIMSRFVCNDIVGQVMDSVHICLHVSLQEQTERNNLPAV 1412
Query: 1418 RQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQA--LSSYVFIAANVILHASKAVQFR 1475
RQYLETFAI IYLKFP+LV EQLVPIL++YD + Q + + + ANVILHA K Q
Sbjct: 1413 RQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQVNLRKTKMIVFANVILHAEKIAQQT 1472
Query: 1476 HLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSY 1535
HL +LLPPI+PLLTSHHHSLRGF QLLV++VL +LFP ++ +S + LEK FE+LKSY
Sbjct: 1473 HLRELLPPILPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESTSSHTISLEKLSFENLKSY 1532
Query: 1536 LAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDV 1595
L KN DC+RLRASM G+LDAYDP+ S TPA +FVNR +E EFECVPT LM+ VL+FLNDV
Sbjct: 1533 LDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEESEFECVPTCLMDNVLSFLNDV 1592
Query: 1596 REDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPK 1655
REDLR SMAKDVVTIKNE KI E+P +S D+E +L + S LDFQ+KITL K
Sbjct: 1593 REDLRASMAKDVVTIKNEGFKIDEEPKRRLIMSTTDEE----RLSEPSSLDFQRKITLSK 1648
Query: 1656 HENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLID 1715
HE QD SS+S N E YK+L E+EKEDEL Q+L++RS+ +E +++ RQ +LVASL+D
Sbjct: 1649 HEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSGRQSLILVASLVD 1708
Query: 1716 RIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
RIPNLAGLARTCEVFKAS LA+ADA+I+HDKQFQLISVTAEKWVPI+EVPVNS+K FLE+
Sbjct: 1709 RIPNLAGLARTCEVFKASSLAVADASIIHDKQFQLISVTAEKWVPIMEVPVNSLKLFLEK 1768
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
KK EGFS+LGLEQTANS+ LD+Y FPKKTVLVLGREKEGIPVDIIH+LDACIEIPQLGVV
Sbjct: 1769 KKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVV 1828
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
RSLNVHVSGAIALWEYTRQQR
Sbjct: 1829 RSLNVHVSGAIALWEYTRQQR 1849
>gi|297800328|ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313884|gb|EFH44307.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1852
Score = 2002 bits (5187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1067/1893 (56%), Positives = 1340/1893 (70%), Gaps = 93/1893 (4%)
Query: 11 SLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLD----LSKDAIKEGQKLDS 66
S+++SL SFK VPPAA+P LDC+L+STG S+S +F SL++ +D + ++ DS
Sbjct: 4 SVITSLSLSFKQVPPAAVPAFLDCVLSSTGVSSSTLFESLIEQFPFRLEDTVNGDKRFDS 63
Query: 67 DQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVLNQ 126
D CN+IAS+V LCHLL+ G G NH+A Q F+W+ FIPLMKM A++ ++LN+
Sbjct: 64 DDCNHIASLVAGLCHLLRNFGFG----TADNHNALQLFVWRVFIPLMKMVRAYDLDMLNK 119
Query: 127 ISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKGET 186
I ESFFDVV +T+ L +LVP + S+G S+G+LQ+EESD I+WG +
Sbjct: 120 IVESFFDVVIETSV---LGVSLVPFLLRSIGVSMGMLQHEESDFIKWGDLLL----RDSL 172
Query: 187 NASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCYAEKFAANL 246
N ++MD+ + +LS S +P SCH+L L++++A ++ QAAP +S FAA +
Sbjct: 173 NTTNMDENYIANLSESFPIPLSCHLLNLILNAAFQSRQAAPEMES----------FAAGM 222
Query: 247 LWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFFKKI 306
LW LCNMTERLL QS++HRSCA++FLLP I KAF S S +I ++YILSR F K+I
Sbjct: 223 LWDLCNMTERLLSQSLKHRSCAVSFLLPAIFKAFSSQSSLKILHQENMYILSRNGFKKRI 282
Query: 307 WKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFWEEIK 366
W+CC+ LFS+G++ERRDA++VLSL LS S+T+ +E+ EFD+R+ +EFW+EIK
Sbjct: 283 WECCKKLFSVGSIERRDAYSVLSLCLSSGSWTDETESFVSEKEAVEFDLRSEQEFWDEIK 342
Query: 367 RGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGK---NSTARGMTKRDLWAV 423
GLV +E LVRKQSLHILK+VL I S VS S+ K NS R MT++D WA
Sbjct: 343 IGLVVDESLVRKQSLHILKSVLSI-------SEVSKTSSEKKPEGNSGNRSMTRKDTWAE 395
Query: 424 KEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFSL 483
KEAKSLGVG+L S D L QQ W+AF+LLYEMLEEY THLVEAAW++QI LL++ SL
Sbjct: 396 KEAKSLGVGELYGSVDSGLT-SQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSL 454
Query: 484 PHDN-LPGSTGRAHQNWIKPSGE---IFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWK 539
+D L +H ++ E IF+WL VLW RGF H NP VR +M+SF GIEW+
Sbjct: 455 RYDGTLKSDCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWR 514
Query: 540 SYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRK 599
Y+ C +S+ ++F+LGPF+EGLNDP HHKDFG KG+Y+SRTIE AA ++ Y S L+ R
Sbjct: 515 RYKTCTQSMSQTFVLGPFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVCAYTSCLNPRN 574
Query: 600 QIAFLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEECS 659
++ FL NLAS+AK+QSF R G MAL +CI S A V + + + D F E S
Sbjct: 575 RVGFLINLASLAKKQSFCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKF-SGTAHEPS 633
Query: 660 PENFPCNDKSDLLDFLRFVIESSKQHFNPNY----RLRGYSFWQ---------------- 699
E+ +D + +LD L+FV ESS+QHFN Y R+ Y+F
Sbjct: 634 CEHLSQDDMTHILDVLKFVAESSRQHFNHKYQLIIRMWNYNFVASLMILNTLKVLLSIVF 693
Query: 700 FKLWFPVCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSK 759
F F V +KVLE AAS + VPL LL F+SA+PREFTD+ GSLR + EWL GC++
Sbjct: 694 FFFHFLVYQKVLETAASAVNPCNVPLGTLLQFVSAIPREFTDHDGSLRKMMLEWLQGCNR 753
Query: 760 QQSANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVI 819
+ S + C +L SL ++ F +S+ + DDEDL++W+S+ KRWARV FL+I
Sbjct: 754 KISNSLCTDGTRLLASLYEYLKGF-----ISDNVESFDDEDLEAWDSQTKRWARVLFLII 808
Query: 820 KDEQDLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIR 879
E+ L ++ F+QN G++ ++ NH+ KFLI L+ L E+Q MQ+ SE ++
Sbjct: 809 NKEKYLTDIIMFVQNSGLSFFQEKNHLERTPAKFLIFILSMLLELQNMQDGISELSSSVK 868
Query: 880 TKSEIDSLKTVDQFSYAEASIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLP 939
KS I S + + AS +K A + ++L+EL+ F++ SCSIFWS+ +E LP
Sbjct: 869 RKSCIGSNEETGKQIVGNASNIKKKFAVVLLSILKELIQFADSSCSIFWSHTTVENGALP 928
Query: 940 SSVIGKLGGPSQRRLSFSTTTVVLQAIMSVKAVASISSWCARLKRN-ASIEFAYDFMWNL 998
SV GKLGGPSQRRLS TTT VL+A++SVK + ISS+CA+ ++ A F W
Sbjct: 929 GSVTGKLGGPSQRRLSIPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALGFFWKF 988
Query: 999 FWKTIQSPTSDSESGAEVCLAAYEALASALKALVGPQALCFFK--KNDKLMLSAVEGKPL 1056
TI +SE+ AE+ LAA+EALA+ L A V + F +ND +L+ V+G+
Sbjct: 989 TQHTISPQICNSEAAAEIYLAAFEALAAVLNAFVSLCSAGAFNLLENDNTLLTMVDGEFW 1048
Query: 1057 LDSWVQAFLQNINALLAAGVLARARRAILLNWKWLCLESLLSLPYC--GLENGANCSYFF 1114
L V AFL NIN LL AGVL R+RRA+LL+WKWLC+ESLLS+ + + FF
Sbjct: 1049 LQVSVPAFLHNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSVMHILDARRTPGDRKSFF 1108
Query: 1115 SDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWH 1174
SDD V+ IF D+VESLENAGEGS LPML+SVRL L + ASG+S + GVDTQ MW
Sbjct: 1109 SDDTVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASGNSS--LDGFSGVDTQTMWQ 1166
Query: 1175 LVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGT 1234
LV+S WILHISC KRRVAPIAALLSSVLH S+FS ++MH+ E+ GPLKWFVEKVLEEG
Sbjct: 1167 LVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHIAEDGQGPLKWFVEKVLEEGQ 1226
Query: 1235 KSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEV 1294
KSPRTIRLAALHL+GLWL P IKYYI+EL+LLTLYGSVAFDEDFEAEL++N DA+TEV
Sbjct: 1227 KSPRTIRLAALHLSGLWLMYPRTIKYYIRELRLLTLYGSVAFDEDFEAELSDNTDARTEV 1286
Query: 1295 SLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKE---CQDALDSGKLFL 1351
SLLAKSP PELTE FINTELYARVSVA LF KLA+ +V A + CQDAL +GKLFL
Sbjct: 1287 SLLAKSPDPELTELFINTELYARVSVAGLFQKLANLAYMVEPASQNQGCQDALVAGKLFL 1346
Query: 1352 LGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLY- 1410
L LLD V+DKDLA+ELYKKYSAIHRRK+RAWQMICI+SRFV NDIVGQV +HI L+
Sbjct: 1347 LELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMDSVHICLHV 1406
Query: 1411 -------RNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAAN 1463
RNNLP+VRQYLETFAI IYLKFP+LV EQLVPIL++YD + Q SS AN
Sbjct: 1407 SLQEQTERNNLPAVRQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQMFSS-----AN 1461
Query: 1464 VILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMP 1523
VILHA K Q HL +LLPPI+PLLTSHHHSLRGF QLLV++VL +L P ++ +S +
Sbjct: 1462 VILHAEKIAQQTHLRELLPPIIPLLTSHHHSLRGFAQLLVHRVLFRLSPPVESTSSHTIS 1521
Query: 1524 LEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTS 1583
LEK FE+LKSYL KN DC+RLRASM G+LDAYDP+ S TPA +FVNR +E EFECVPT
Sbjct: 1522 LEKLSFENLKSYLDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEESEFECVPTC 1581
Query: 1584 LMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDS 1643
LM+ VL+FLNDVREDLR SMA DVVTIKNE KI E P+ +S D+E ++ + S
Sbjct: 1582 LMDNVLSFLNDVREDLRASMANDVVTIKNEGFKIDEGPNRRLIISTTDEE----RISEPS 1637
Query: 1644 LLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRAS 1703
LDFQ+KITL KHE QD SS+S N E YK+L E+EKEDEL Q+L++RS+ +E +++
Sbjct: 1638 SLDFQRKITLSKHEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSG 1697
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
RQ +LVASL+DRIPNLAGLARTCEVFKAS LA+ADANI+HDKQFQLISVTAEKWVPI+E
Sbjct: 1698 RQSLILVASLVDRIPNLAGLARTCEVFKASNLAVADANIIHDKQFQLISVTAEKWVPIME 1757
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
VPVNS+K FLE+KK EGFS+LGLEQTANS+ LD+Y FPKKTVLVLGREKEGIPVDIIH+L
Sbjct: 1758 VPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHIL 1817
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR
Sbjct: 1818 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1850
>gi|255566751|ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
gi|223536320|gb|EEF37970.1| RNA binding protein, putative [Ricinus communis]
Length = 1744
Score = 1983 bits (5137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1017/1504 (67%), Positives = 1182/1504 (78%), Gaps = 35/1504 (2%)
Query: 370 VDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWAVKEAKSL 429
VD E LVRKQSLHILK VLQ+ Q +S ++ +SQ K S GMTKR +WA KEAKSL
Sbjct: 257 VDAESLVRKQSLHILKRVLQLGAGTQSNSPNTEKKSQEKYSIPNGMTKRAIWADKEAKSL 316
Query: 430 GVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFSLPHDNLP 489
GVGKLC S D L G+QQWEAFILLYEMLEEY THLVEAAW HQ+TLLLQFS+ +DN
Sbjct: 317 GVGKLCNSMDSPL-DGRQQWEAFILLYEMLEEYGTHLVEAAWEHQVTLLLQFSVSYDNFA 375
Query: 490 GSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYENCAKSVP 549
S QN GE+F WL++LW+ GF H NPQVR +IMQSFLGIEW Y + AKSVP
Sbjct: 376 NSICGIQQNQTAVLGEVFSWLTILWQLGFRHDNPQVRCLIMQSFLGIEWMKYHDAAKSVP 435
Query: 550 ESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIAFLSNLAS 609
ESF+LG F+EGLNDPVHHKDFG KGVY+SRTIE AA FL QY +L+ RK+I FL +LAS
Sbjct: 436 ESFILGSFVEGLNDPVHHKDFGVKGVYTSRTIEAAARFLCQYTRYLNARKEIVFLHSLAS 495
Query: 610 VAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEECSPENFPCNDKS 669
VAK QSFGR GLM LAECIASAACGV N+AE DA ++V + S + N K+
Sbjct: 496 VAKHQSFGRAGLMGLAECIASAACGVGLRDGNEAEWTKDALCDEVWLDSSSKKVHIN-KT 554
Query: 670 DLLDFLRFVIESSKQHFNPNYRLRGYS---FWQFKLWFPVCEKVLEAAASLMCTFEVPLE 726
DLLD LR+VIESSKQHFNP YR R + F + F VCEKVL AA S++ T +VPLE
Sbjct: 555 DLLDVLRYVIESSKQHFNPKYRFRVLNTIIVIPFVI-FAVCEKVLGAATSVVSTVDVPLE 613
Query: 727 ILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLNDFPISFTSH 786
+LLHF+S LPREFTDYGG LR +++EWL G K+ + S + +LKSL +FP FTS
Sbjct: 614 VLLHFVSTLPREFTDYGGPLRVKMQEWLLGVDKKHFS----SEIQLLKSLQEFPERFTSS 669
Query: 787 PSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICKQSNHV 846
+ +AFV+ DDEDLD+W+S+ KRWARV FLVIK+E L P+ KF++N G++ICKQ H
Sbjct: 670 QHVVDAFVSFDDEDLDAWDSEVKRWARVLFLVIKEENHLVPIFKFLRNCGVDICKQCKHA 729
Query: 847 RCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVDQFSYAEASIFHEKLA 906
+KFL+LT+N + EI+I+ ER E G +IR+ SE L+T+DQ EAS +EK +
Sbjct: 730 GWSPVKFLVLTVNLIAEIRILWEREVERGFKIRSNSENSLLRTIDQLGSEEASAINEKFS 789
Query: 907 NLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFSTTTVVLQAI 966
+LF ++LEELV F++ SCSIFW++ +++T+LPSSV GKLGGPSQRRLS ST T VL+A+
Sbjct: 790 DLFLSILEELVSFASTSCSIFWTSF-VKDTDLPSSVRGKLGGPSQRRLSSSTATAVLEAV 848
Query: 967 MSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCLAAYEALAS 1026
S+ +VAS++SWC+ K + ++FA+ FMW F KT S T D+ESGAEVCLAAYEALA
Sbjct: 849 CSLPSVASVTSWCSLFKNDVQLKFAWSFMWKFFLKTNSSLTYDTESGAEVCLAAYEALAP 908
Query: 1027 ALKALV---GPQALCFFKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAGVLARARRA 1083
L+ALV P AL + +DK SA E K LD V +FLQNIN LLA GVL R+RRA
Sbjct: 909 VLRALVFTFSPLALDLIRDSDKSSSSA-EEKAWLDQLVLSFLQNINNLLAVGVLVRSRRA 967
Query: 1084 ILLNWKWLCLESLLSLPYCGLENG---ANCSYFFSDDVVRYIFNDLVESLENAGEGSLLP 1140
+LLNWKWLCLESLLS+P+ ENG + FFS+ +R IF+DLVESLENAGEGS+LP
Sbjct: 968 VLLNWKWLCLESLLSIPHYAFENGPHLVDNRLFFSEAAIRLIFSDLVESLENAGEGSVLP 1027
Query: 1141 MLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSS 1200
MLRS+RLT L ASG+SGSLVSSC GVD QMMWHLVRSSW+LH+S NKRRVA IAALLSS
Sbjct: 1028 MLRSIRLTFGLLASGNSGSLVSSCNGVDAQMMWHLVRSSWMLHVSNNKRRVAAIAALLSS 1087
Query: 1201 VLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKY 1260
VLH SVF++E MH N PGPLKWFVE +L EGTKSPRTIRLAALHLTGLWL+ P ++KY
Sbjct: 1088 VLHASVFADEAMHTNNNGPGPLKWFVENILVEGTKSPRTIRLAALHLTGLWLSQPRMMKY 1147
Query: 1261 YIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSV 1320
YIKELKLLTLYGSVAFDEDFEAELAEN DA+TEVSLLAK P ELTEAFINTELYARVSV
Sbjct: 1148 YIKELKLLTLYGSVAFDEDFEAELAENRDARTEVSLLAKCPDSELTEAFINTELYARVSV 1207
Query: 1321 AVLFSKLADQTEIVGSAKE---CQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHR 1377
AVL + LAD +VGSA E C AL+SGK+FLL LLD VNDKDLA+ELYKKYS IHR
Sbjct: 1208 AVLLNNLADLANLVGSANENEDCSAALESGKIFLLELLDSAVNDKDLAKELYKKYSGIHR 1267
Query: 1378 RKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVA 1437
RK+R WQMIC+LSRFV +DIVG+VT LHI+LYRNNLP+VRQYLETFAI IYLKFP+LV
Sbjct: 1268 RKIRVWQMICVLSRFVTDDIVGKVTCSLHIALYRNNLPAVRQYLETFAINIYLKFPTLVG 1327
Query: 1438 EQLVPILRDYDMRPQ-----ALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHH 1492
EQLVPILRDYDMRPQ ALSSYVFIAAN+ILH SKA Q RHL++LLPPI+PLLTSHH
Sbjct: 1328 EQLVPILRDYDMRPQVNITSALSSYVFIAANIILHTSKAFQSRHLDELLPPILPLLTSHH 1387
Query: 1493 HSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGY 1552
HSLRGFTQLLVYQVL K+ LD G S+ LEK CFEDLKSYLAKN DC RLRASM GY
Sbjct: 1388 HSLRGFTQLLVYQVLSKILSPLDCGASETTDLEKRCFEDLKSYLAKNPDCRRLRASMEGY 1447
Query: 1553 LDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKN 1612
LDAY+P +S TP IF+NR +ELEFECVPTSL+E+VL+FLNDVREDLR SMAKDV+TIKN
Sbjct: 1448 LDAYNPIVSGTPTGIFINRVEELEFECVPTSLLEEVLSFLNDVREDLRCSMAKDVITIKN 1507
Query: 1613 ESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREA 1672
ES KI E+P C TL +L +++ LDFQKKIT KHE +D SSS G+ A
Sbjct: 1508 ESFKIDENPTCRRTLP--------KELLEEASLDFQKKITPSKHEKKDADSSSILGSN-A 1558
Query: 1673 YKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKA 1732
YKQLLE+EKEDEL DQ LQ+R L ME IRASRQ +LVAS +DR+PNLAGLARTCEVF+A
Sbjct: 1559 YKQLLEMEKEDELLDQSLQSRILTMERIRASRQHLILVASFLDRVPNLAGLARTCEVFRA 1618
Query: 1733 SGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANS 1792
SGLAIAD +ILHDKQFQLISVTAEKWVPI+EVPVNS+K FLE+KK EG+S+LGLEQTANS
Sbjct: 1619 SGLAIADKSILHDKQFQLISVTAEKWVPIIEVPVNSVKQFLEKKKQEGYSILGLEQTANS 1678
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
+ LDQ+ FPKKTVLVLGREKEG+PVDIIH+LDACIEIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1679 VSLDQFAFPKKTVLVLGREKEGVPVDIIHILDACIEIPQLGVVRSLNVHVSGAIALWEYT 1738
Query: 1853 RQQR 1856
RQQR
Sbjct: 1739 RQQR 1742
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 190/274 (69%), Gaps = 12/274 (4%)
Query: 9 VGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLDLSKDAIKEGQKLDSDQ 68
+ +L+SSL SFK VP +AIP +LDCIL STG S S++F S L ++K+ IKE +KLD
Sbjct: 1 MDTLISSLSRSFKKVPLSAIPAILDCILASTGLSPSSLFDSFLHVTKEFIKE-EKLDYSH 59
Query: 69 CNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVLNQIS 128
C+Y+ SMVGALCHLLK GA+ D+ QS +WK FIPLMKM HA E E+LNQI+
Sbjct: 60 CDYLISMVGALCHLLKK--------PGADPDSMQSLIWKCFIPLMKMAHALEREMLNQIA 111
Query: 129 ESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKGETNA 188
ESFFDVV TN+W LE TLVP S G ++ +LQNEESD EW S G +
Sbjct: 112 ESFFDVVNVTNSWDVLEATLVPFFLRSAGLAMDMLQNEESDIFEWAQHSVLLS--GLIDD 169
Query: 189 SDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENG-CYAEKFAANLL 247
S++DKE MLSLS S LP SCH+L +++DS L++ AA T+S++ENG YA+K LL
Sbjct: 170 SNLDKEFMLSLSGSFPLPISCHVLAIILDSTLQSCNAASRTESMVENGSSYAQKLFYKLL 229
Query: 248 WYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFV 281
W LCNM+ERLLLQS+EHRSCA FLLP+ ++ V
Sbjct: 230 WDLCNMSERLLLQSLEHRSCATGFLLPVDAESLV 263
>gi|224138732|ref|XP_002326676.1| predicted protein [Populus trichocarpa]
gi|222833998|gb|EEE72475.1| predicted protein [Populus trichocarpa]
Length = 1224
Score = 1726 bits (4470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 875/1248 (70%), Positives = 1001/1248 (80%), Gaps = 39/1248 (3%)
Query: 622 MALAECIASAACGVAAHIENKAECCGDAFPEKVPEECSPENFPCNDKSDLLDFLRFVIES 681
M LAECIASAA GV H ++ A+ DAFP++V E SPENF + ++ LD LRFVIES
Sbjct: 1 MGLAECIASAAHGVGRH-DSGAKWSEDAFPDEVQVESSPENFS-DCRTAFLDVLRFVIES 58
Query: 682 SKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASLMCTFEVPLEILLHFISALPREFTD 741
SKQHFNP YRL+ VCEKVLEAA SL+ T +VPLEILLHFI+ LPR FTD
Sbjct: 59 SKQHFNPYYRLQ------------VCEKVLEAATSLVSTLDVPLEILLHFIATLPRAFTD 106
Query: 742 YGGSLRARVREWLSGCSKQQ-SANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTCDDED 800
YGGSLR + +EWL G + + + N C + + +LK+L DFP FTS L + F++ DDED
Sbjct: 107 YGGSLRLKTQEWLLGSATEHCNVNCCGAEIQLLKNLQDFPERFTSSQYLVDGFLSLDDED 166
Query: 801 LDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNF 860
LD+WES++KRWAR FL+IK E LAP+L+FIQN G+NICKQ +H+ + +KFL+L +
Sbjct: 167 LDAWESESKRWARALFLIIKGEDQLAPILRFIQNCGVNICKQQSHLEWLPVKFLVLARSL 226
Query: 861 LQEIQIMQERYSECGIRIRTKSEIDSLKTVDQFSYAEASIFHEKLANLFPNVLEELVCFS 920
+ EIQIMQER ++CGI+I+ +SEI L TVDQ Y EAS+ + ++ LF +LEELV F+
Sbjct: 227 VAEIQIMQERSAQCGIKIKCRSEISLLDTVDQLCYTEASMINGRIHGLFLFILEELVSFA 286
Query: 921 NLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFSTTTVVLQAIMSVKAVASISSWCA 980
+LS SIFWS+I +ET LP SV GKLGG SQRRLS STTT +LQAI S++AVASISSWCA
Sbjct: 287 DLSSSIFWSSIT-KETTLPGSVRGKLGGRSQRRLSTSTTTAILQAITSIQAVASISSWCA 345
Query: 981 RLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCLAAYEALASALKALVGPQALCF- 1039
+ K + + ++F+W FWKT+ SPT DSE+GAE+CLAAYEALA L+ALV +
Sbjct: 346 QFKSDVKLSSVWNFLWKFFWKTVSSPTCDSEAGAEICLAAYEALAPVLRALVSTSSSLSL 405
Query: 1040 --FKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAGVLARARRAILLNWKWLCLESLL 1097
++ND+ VEGK LDS +FLQNIN LLA GVLAR RRA+LLN KW+CLESLL
Sbjct: 406 DLIRENDEFSAPVVEGKCCLDSLALSFLQNINNLLAVGVLARTRRAVLLNQKWICLESLL 465
Query: 1098 SLPYCG------LENGANCSYFFSDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDL 1151
S+PY LE+G S FFSD +R IF+DLVESL+NAGEGS+LPMLRSVRL L L
Sbjct: 466 SIPYSAPWNVLNLEDG---SLFFSDSAIRCIFSDLVESLDNAGEGSVLPMLRSVRLALGL 522
Query: 1152 FASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEE 1211
ASG S VSSC GVD QMMW LV SSWILH++CNKRRVA IAALLSSVLH SVF++E
Sbjct: 523 IASGKLDSHVSSCNGVDAQMMWRLVNSSWILHVNCNKRRVASIAALLSSVLHRSVFTDEG 582
Query: 1212 MHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLY 1271
MH++ N PGPLKWFVE V+EEGTKSPRTIRLAALHLTGLWL++P IKYY+KELKLL+LY
Sbjct: 583 MHLINNRPGPLKWFVENVIEEGTKSPRTIRLAALHLTGLWLSHPKTIKYYMKELKLLSLY 642
Query: 1272 GSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQT 1331
GSVAFDEDFEAEL +N DA TEVSLLAKSP PELTEAFINTELYARVSVAVLF KLAD
Sbjct: 643 GSVAFDEDFEAELCDNQDASTEVSLLAKSPDPELTEAFINTELYARVSVAVLFYKLADLA 702
Query: 1332 EIVGSAKE---CQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICI 1388
+VGSA E C AL+SGKLFL LLD VNDKDLA+ELYKKYS IHRRK+RAWQMIC+
Sbjct: 703 NLVGSANENEDCHAALESGKLFLQELLDSAVNDKDLAKELYKKYSGIHRRKIRAWQMICV 762
Query: 1389 LSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYD 1448
LSRFV +DIV QVTH LHISLYRNN P+VRQYLETFAI IYLKFP LV EQLVPILRDY+
Sbjct: 763 LSRFVTDDIVAQVTHSLHISLYRNNFPAVRQYLETFAINIYLKFPLLVREQLVPILRDYN 822
Query: 1449 MRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLC 1508
M+PQALSSYVFIAANVILHAS A Q RH +LLPPI+PLLTSHHHSLRGFTQLLVYQV C
Sbjct: 823 MKPQALSSYVFIAANVILHASNANQSRHFNELLPPIIPLLTSHHHSLRGFTQLLVYQVFC 882
Query: 1509 KLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIF 1568
K FP LD+G S+ MPLEK CFEDLKSYLAKN DC RLRAS+ GYLDAY+P S TPA IF
Sbjct: 883 KYFPMLDYGASE-MPLEKMCFEDLKSYLAKNPDCRRLRASLEGYLDAYNPIASGTPAGIF 941
Query: 1569 VNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLS 1628
++R +EL FECVPTSLME+VLNFLNDVREDLR SMAKDVVTIKNESLK ED +C T+
Sbjct: 942 IDRVEELGFECVPTSLMEEVLNFLNDVREDLRCSMAKDVVTIKNESLKTDEDGNCRRTVI 1001
Query: 1629 DLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQ 1688
D SQLPK++ DFQKK+TL KHE QD SSS GN EA KQLLE+EKEDEL DQ
Sbjct: 1002 D-------SQLPKETSFDFQKKLTLSKHEKQDTDSSSVLGNNEACKQLLEMEKEDELLDQ 1054
Query: 1689 VLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF 1748
LQ+R L ME IRASRQQF+LVASL+DRIPNLAGLARTCEVFK SGLAIADA+IL DKQF
Sbjct: 1055 SLQSRRLTMEKIRASRQQFILVASLLDRIPNLAGLARTCEVFKVSGLAIADASILRDKQF 1114
Query: 1749 QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
QLISVTAEKWVPI+EVPVNS+KHFLE+KK +GFS+LGLEQTANS+PLD + FPKKTVLVL
Sbjct: 1115 QLISVTAEKWVPIIEVPVNSVKHFLEKKKRDGFSILGLEQTANSVPLDHHAFPKKTVLVL 1174
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR
Sbjct: 1175 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1222
>gi|297745670|emb|CBI40924.3| unnamed protein product [Vitis vinifera]
Length = 1203
Score = 1621 bits (4197), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 799/1140 (70%), Positives = 937/1140 (82%), Gaps = 11/1140 (0%)
Query: 727 ILLHFISALPREFTDYGGSLRARVREWLSGCSKQQ-SANNCKSRMLVLKSLNDFPISFTS 785
+++ +I +P + DY L +V +WL GC K+ A+ C ++M++L+S DFP F S
Sbjct: 63 VVILYIFTMPCLWVDYEIFLMLKVHQWLLGCGKKHCDADCCSTKMMLLESFYDFPKRFIS 122
Query: 786 HPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICKQSNH 845
L +AFVT DDEDLD+W +AKRW RVFFLVIK+EQDL P+LKFIQ G I + N+
Sbjct: 123 CHQLVDAFVTYDDEDLDAWGYEAKRWTRVFFLVIKEEQDLVPILKFIQMYGTKIFRAINN 182
Query: 846 VRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVDQFSYAEASIFHEKL 905
V ++MKFLI TL+ +QE+QIMQER ++C +++RTKSE ++++Q S +EASI EK
Sbjct: 183 VEWVTMKFLIFTLSLVQELQIMQERTADCSVKVRTKSEFGFAESINQLSSSEASIATEKF 242
Query: 906 ANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFSTTTVVLQA 965
N+F +LEELV ++NLSCSIFWS +A E+ NLP S+ GKLGGPSQRRL ST+T VLQA
Sbjct: 243 VNVFVYILEELVTYANLSCSIFWSGVATEDGNLPCSIKGKLGGPSQRRLPLSTSTSVLQA 302
Query: 966 IMSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCLAAYEALA 1025
IMS+K VASISSWC +LK +AS+ A++F+W FWK I T DSE GAE+ LAAYEALA
Sbjct: 303 IMSMKTVASISSWCVQLKSDASLNLAFNFLWKSFWKIISCTTCDSEIGAEIHLAAYEALA 362
Query: 1026 SALKALVG---PQALCFFKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAGVLARARR 1082
LKA++ P AL +NDK ML EGKPLLDS V FLQ+IN+LL G LAR RR
Sbjct: 363 PVLKAVISVFSPLALDLIGENDKSMLQKAEGKPLLDSLVLTFLQDINSLLGFGALARTRR 422
Query: 1083 AILLNWKWLCLESLLSLPYCGLENGAN---CSYFFSDDVVRYIFNDLVESLENAGEGSLL 1139
AIL+NWKW CLESLLS+PY L+NG + C+ FFSD R IF+DLVESLENAGEGS+L
Sbjct: 423 AILMNWKWHCLESLLSIPYYALKNGVHLEPCATFFSDAAARRIFSDLVESLENAGEGSVL 482
Query: 1140 PMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLS 1199
PMLRSVRL L LF S GS+VSSC G+D QMMWHLVRSSWILH+SCNKRRVAPIAALLS
Sbjct: 483 PMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWHLVRSSWILHVSCNKRRVAPIAALLS 542
Query: 1200 SVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIK 1259
+VLH SVF++E MH+ +N PGPLKWFVEK+LEEG KSPRTIRLAALHL+GLWL+NP IK
Sbjct: 543 AVLHSSVFNDEGMHVTDNGPGPLKWFVEKILEEGAKSPRTIRLAALHLSGLWLSNPQTIK 602
Query: 1260 YYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVS 1319
YY+KELKLLTLYGSVAFDEDFEAELAEN+DA+ EVSLLAKSP PELTE FINTELYARVS
Sbjct: 603 YYMKELKLLTLYGSVAFDEDFEAELAENHDARNEVSLLAKSPDPELTEIFINTELYARVS 662
Query: 1320 VAVLFSKLADQTEIVGSAKE---CQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIH 1376
VAVLF KLAD ++VG E C+ A++SGKLFLL LLD VVND DL++ELYKKYS IH
Sbjct: 663 VAVLFCKLADLADMVGPINENDDCRAAIESGKLFLLELLDSVVNDTDLSKELYKKYSRIH 722
Query: 1377 RRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLV 1436
R K+RAWQMIC+LSRF+ DIV +V+ FLHISLYRNNLPSVRQYLETFAI IYLKFPSLV
Sbjct: 723 RHKIRAWQMICVLSRFIHQDIVQRVSCFLHISLYRNNLPSVRQYLETFAIHIYLKFPSLV 782
Query: 1437 AEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLR 1496
+QLVPIL+DYDMRPQALSSYVFIAANVILHA +AV+FRHL++LLPPI+PLLTSHHHSLR
Sbjct: 783 VDQLVPILQDYDMRPQALSSYVFIAANVILHAPEAVRFRHLDELLPPIIPLLTSHHHSLR 842
Query: 1497 GFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAY 1556
GFTQLLVYQ+ KLFP +D G S+ +PLEK CF+DLKSYL KN+DC RLR SM+G+LDA+
Sbjct: 843 GFTQLLVYQIFFKLFP-VDSGVSEILPLEKRCFKDLKSYLEKNTDCIRLRKSMAGFLDAF 901
Query: 1557 DPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLK 1616
DPN S+TP+ IF +R +ELEFECVPTSLME V+ FLNDVREDLR +MAKD+VTIKNE L
Sbjct: 902 DPNNSVTPSGIFTDRVEELEFECVPTSLMEHVVTFLNDVREDLRCAMAKDMVTIKNERLC 961
Query: 1617 IGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQL 1676
+ ED +C E D +KE+ + +PKD +DFQKKITL KHE QD SS SF + E K L
Sbjct: 962 VDEDSNCTEISVDTNKEKLLTLMPKDISVDFQKKITLGKHEKQDTSSRSFLDSNETCKPL 1021
Query: 1677 LEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
LEIEKED+L DQ+LQ+RS+AME IR+S+Q F+LVASLIDRIPNLAGLARTCEVFKA+GLA
Sbjct: 1022 LEIEKEDQLLDQLLQSRSVAMERIRSSQQHFILVASLIDRIPNLAGLARTCEVFKAAGLA 1081
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
IAD NILHDKQFQLISVTAEKWVPIVEVPV+S+K FLE+KK EGFS+LGLEQTANS+PLD
Sbjct: 1082 IADTNILHDKQFQLISVTAEKWVPIVEVPVSSVKVFLEKKKQEGFSILGLEQTANSVPLD 1141
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+Y+FPKK VLVLGREKEGIPVDIIH+LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR
Sbjct: 1142 KYIFPKKIVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1201
>gi|2245119|emb|CAB10541.1| TRP-185 like protein [Arabidopsis thaliana]
gi|7268513|emb|CAB78764.1| TRP-185 like protein [Arabidopsis thaliana]
Length = 1493
Score = 1450 bits (3754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/1361 (57%), Positives = 977/1361 (71%), Gaps = 43/1361 (3%)
Query: 475 ITLLLQFSLPHDN-LPGSTGRAHQNWIKPSGE---IFDWLSVLWERGFCHGNPQVRYMIM 530
I LL++ SL +D L +H ++ E IF+WL VLW RGF H NP VR +M
Sbjct: 1 IDLLIKSSLRYDGTLKSDCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVM 60
Query: 531 QSFLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQ 590
+SF GIEW+ Y+ C +S+ ++F+LGPF+EGLNDP HHKDFG KG+Y+SRTIE AA ++
Sbjct: 61 ESFFGIEWRRYKTCTQSMSQTFVLGPFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVSA 120
Query: 591 YASFLDTRKQIAFLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAF 650
Y S L+ R ++ FL NLAS+AK+QSF R G MAL +CI S A V + + + D F
Sbjct: 121 YTSCLNPRNRVGFLINLASLAKKQSFCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKF 180
Query: 651 PEKVPEECSPENFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRG----YSFWQFKLW--- 703
+E S + +D + +LD L+FV ESS+QHFN YR+R + +F L
Sbjct: 181 -SGTAQESSCGHLSQDDMTHILDVLKFVAESSRQHFNHKYRIRASLTILNTLKFLLLIVL 239
Query: 704 --FPVCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQ 761
F V +KVLE AAS++ VPL LL F+SA+PREFTD+ G LR + EWL GC+++
Sbjct: 240 FHFLVYQKVLETAASVVNPCNVPLGTLLQFVSAIPREFTDHDGLLRKMMLEWLQGCNRKT 299
Query: 762 SANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKD 821
S + C +L SL ++ FTS + + DDEDL++W+S+ KRWARVFFL+I
Sbjct: 300 SNSLCTDGTRLLASLYEYLKGFTS-----DNVESFDDEDLEAWDSQTKRWARVFFLMINK 354
Query: 822 EQDLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTK 881
E+ L ++ F+QN G++ ++ NH++ KFLI L+ L E+Q MQ+ SE +++K
Sbjct: 355 EEHLTDIIMFVQNNGLSFFQEKNHLKRAPAKFLIFILSMLLELQNMQDGISELSSSVKSK 414
Query: 882 SEIDSLKTVDQFSYAEASIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSS 941
S I S + + +AS +K A + ++L+EL+ F++ SCSIFWS+ +E LP S
Sbjct: 415 SGIGSDEQTGKQIVVDASSIKKKFAVVLLSILKELIPFADSSCSIFWSHTTVENGALPGS 474
Query: 942 VIGKLGGPSQRRLSFSTTTVVLQAIMSVKAVASISSWCARLKRN-ASIEFAYDFMWNLFW 1000
VIGKLGGPSQRRLS TTT VL+A++SVK + ISS+CA+ ++ A F W
Sbjct: 475 VIGKLGGPSQRRLSVPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALAFFWKFTQ 534
Query: 1001 KTIQSPTSDSESGAEVCLAAYEALASALKALVGPQALCFFK--KNDKLMLSAVEGKPLLD 1058
TI S +SE+ AE+ LAA+EALAS L A V + F +ND +LS V+G+ L
Sbjct: 535 HTISSQICNSEAAAEIYLAAFEALASVLNAFVSLCSAGAFNLLENDSTLLSMVDGEFWLQ 594
Query: 1059 SWVQAFLQNINALLAAGVLARARRAILLNWKWLCLESLLSLPYC--GLENGANCSYFFSD 1116
V AF++NIN LL AGVL R+RRA+LL+WKWLC+ESLLS+ + + FFSD
Sbjct: 595 VSVPAFVRNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSVMHILDARRIPEDRKSFFSD 654
Query: 1117 DVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLV 1176
D V+ IF D+VESLENAGEGS LPML+SVRL L + ASG S + GVDTQ MW LV
Sbjct: 655 DTVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASGKSS--LDGFSGVDTQTMWQLV 712
Query: 1177 RSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKS 1236
+S WILHISC KRRVAPIAALLSSVLH S+FS ++MH+ E+ GPLKWFVEKVLEEG KS
Sbjct: 713 KSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHITEDEHGPLKWFVEKVLEEGQKS 772
Query: 1237 PRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSL 1296
PRTIRLAALHL+GLWL P IKYYIKEL+LLTLYGSVAFDEDFEAEL++N DA+TEVSL
Sbjct: 773 PRTIRLAALHLSGLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSL 832
Query: 1297 LAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSA---KECQDALDSGKLFLLG 1353
LAKSP PELTE FINTELYARVSVA LF KLA+ +V A ++CQDAL +GKLFLL
Sbjct: 833 LAKSPDPELTELFINTELYARVSVAGLFQKLANLAYMVEPASQNQDCQDALVAGKLFLLE 892
Query: 1354 LLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLY--- 1410
LLD V+DKDLA+ELYKKYSAIHRRK+RAWQMICI+SRFV NDIVGQV +HI L+
Sbjct: 893 LLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVCNDIVGQVMDSVHICLHVSL 952
Query: 1411 -----RNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQA--LSSYVFIAAN 1463
RNNLP+VRQYLETFAI IYLKFP+LV EQLVPIL++YD + Q + + + AN
Sbjct: 953 QEQTERNNLPAVRQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQVNLRKTKMIVFAN 1012
Query: 1464 VILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMP 1523
VILHA K Q HL +LLPPI+PLLTSHHHSLRGF QLLV++VL +LFP ++ +S +
Sbjct: 1013 VILHAEKIAQQTHLRELLPPILPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESTSSHTIS 1072
Query: 1524 LEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTS 1583
LEK FE+LKSYL KN DC+RLRASM G+LDAYDP+ S TPA +FVNR +E EFECVPT
Sbjct: 1073 LEKLSFENLKSYLDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEESEFECVPTC 1132
Query: 1584 LMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDS 1643
LM+ VL+FLNDVREDLR SMAKDVVTIKNE KI E+P +S D+E +L + S
Sbjct: 1133 LMDNVLSFLNDVREDLRASMAKDVVTIKNEGFKIDEEPKRRLIMSTTDEE----RLSEPS 1188
Query: 1644 LLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRAS 1703
LDFQ+KITL KHE QD SS+S N E YK+L E+EKEDEL Q+L++RS+ +E +++
Sbjct: 1189 SLDFQRKITLSKHEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSG 1248
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
RQ +LVASL+DRIPNLAGLARTCEVFKAS LA+ADA+I+HDKQFQLISVTAEKWVPI+E
Sbjct: 1249 RQSLILVASLVDRIPNLAGLARTCEVFKASSLAVADASIIHDKQFQLISVTAEKWVPIME 1308
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
VPVNS+K FLE+KK EGFS+LGLEQTANS+ LD+Y FPKKT
Sbjct: 1309 VPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKT 1349
>gi|242037305|ref|XP_002466047.1| hypothetical protein SORBIDRAFT_01g050660 [Sorghum bicolor]
gi|241919901|gb|EER93045.1| hypothetical protein SORBIDRAFT_01g050660 [Sorghum bicolor]
Length = 1767
Score = 1310 bits (3389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 808/1895 (42%), Positives = 1097/1895 (57%), Gaps = 192/1895 (10%)
Query: 13 VSSLVSSFKLVPPAAIPPMLDCILTSTGSSASA-IFFSLLDLSKDAIKEGQKLDSDQCNY 71
V++L S F+ +P A+P ++DC+L S+ SS+ + +F +LL S +E
Sbjct: 9 VAALESCFRSLPADAVPAVVDCVLASSTSSSPSQLFHALLRCSPPFQREQH--------- 59
Query: 72 IASMVGALCHL--LKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMR-HAFEPEVLNQIS 128
A+CH L+ L A + + + +W+ F+PL++ P +Q+
Sbjct: 60 -----AAICHAAALRHLLAQFDNPPKVR-EVLRLLLWRVFLPLLRDSIQPSHPAYFHQVI 113
Query: 129 ESFFDVVTKTNTWINLEKTLVP-CIFSSVGFSLGVLQNEESDAIEWGSC--SPFQGSKGE 185
D V+ T +W L T+V CI SSV ++G L +++++ + S + F G
Sbjct: 114 AMMCDAVSDTGSWDLLGATIVSFCIRSSV-VAMG-LSAADANSMVYQSIMEADFPGE--- 168
Query: 186 TNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCYAEKFAAN 245
S SR + L S +L ++ L + P++ + + N
Sbjct: 169 ------------SPSRLLPLSNSSSVLASLLVDMLERRRTIPTSQ---KGAADLDALVQN 213
Query: 246 LLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFFKK 305
L W L + ++ + E+RSCA LL +L + + SF + LSR F +
Sbjct: 214 LTWDLSKLVLKMFTHAQEYRSCATRILLQPVLISLADVSCVTTSFGAVQHKLSRFGFLEC 273
Query: 306 IWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRS-DRGEEFDIRAVREFWEE 364
IW C +LF LG ER DA+ +LSLYLS + G + + D EFD+R V EFW+E
Sbjct: 274 IWNSCISLFPLGPGERLDAYIILSLYLS--TLKSGHQAAVLGVDIVHEFDLRNVSEFWDE 331
Query: 365 IKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGV--------SDMRSQGKNSTARGMT 416
++RGLVD++ LVRKQ+ ++L L I + G+ + + +Q K + G T
Sbjct: 332 LRRGLVDKDSLVRKQAFYVLTISLSIFTSSSGNDSSQHSSSRSSAALPAQIKANA--GAT 389
Query: 417 KRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQIT 476
KR+ WA KEAKSLGVG++ S GQ +W+ F+LLYEML+EY THLVEAAW HQ+
Sbjct: 390 KRERWADKEAKSLGVGEMDQSGG-HCSNGQDRWKVFLLLYEMLQEYGTHLVEAAWTHQVV 448
Query: 477 LLLQFSLPHDNLPGST--GRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFL 534
L + S+P ++ T G H G I W++VLWERGF H NPQVR ++MQSFL
Sbjct: 449 QLFE-SMPQNDYLNHTSLGAFHAQMESWEG-ILYWMAVLWERGFSHENPQVRCLVMQSFL 506
Query: 535 GIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASF 594
+ W+ Y+ CA+ +P F+LGP + GLND VHHKDFG G Y+S+TI+ A F Y
Sbjct: 507 DLAWERYKICAQIIPRGFVLGPLIRGLNDVVHHKDFGIGGAYNSKTIKDAERFFRTYTHN 566
Query: 595 LDTRKQIAFLSNLASVAKQQSFGRVGLMALAECIASAA---------CGVAAHIENKAEC 645
L +I + +LAS AKQ SFGR GLM LA C+AS C ++ K +
Sbjct: 567 LVKCDRIHLVWSLASAAKQDSFGRAGLMTLASCVASCTHQSETNDVPCAISGKAATKCDG 626
Query: 646 CGDAFPEKVPEECSPENFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFP 705
C VP E +DLLD L + E SKQHFNP YRL+
Sbjct: 627 C-------VPTEVR--------STDLLDVLWILSERSKQHFNPKYRLK------------ 659
Query: 706 VCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANN 765
VCE+V++ A SL+ E+PL LLHFI+ +PREFTDY G LR V++W
Sbjct: 660 VCEQVIQVATSLISATEIPLNQLLHFIATIPREFTDYTGPLRVVVQKWFV------QKEE 713
Query: 766 CKSRMLVLKSLNDFPISFTSHPS--LSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQ 823
C + +L L DFP +F S SN F DDED+D+WE++A+RWAR LV +++
Sbjct: 714 CSAGNTLLTKLIDFPATFVSQKQNEGSNVF---DDEDVDAWEAEARRWARTLLLVTSEDE 770
Query: 824 DLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSE 883
L + F++ G + +Q I KF I+ L+F++E++ +S+ + +
Sbjct: 771 HLKRIFGFLEAYGYKLFEQCPSGDFIPTKFFIIVLSFIEELEENMVAFSKLSCSVFWFRD 830
Query: 884 IDSLKTVDQFSYAEASIFHEKLANLFPNVLEELVCFS--NLSCSIFWSN---IAMEETNL 938
+++ +LA + + + V F+ +++ FW + + +
Sbjct: 831 VENKDLPHSIKGKLGGPSQRRLATSITSSVLQGVEFTKKHINHLSFWDHRNGTRQGGSKV 890
Query: 939 PSSVIGKLGGPSQRRLSFSTTTVVL-----QAIMSVKAVASISSWCARLKRNASIEFAYD 993
S + + GG L VVL I SV+ V+S+SSWC S+ A+
Sbjct: 891 QSKGLMEKGG----FLWMDEDAVVLVQDRWGEIWSVRCVSSVSSWCNHYCSGDSVSSAFS 946
Query: 994 FMWNLFWKTIQSPTSDSESGAEVCLAAYEALASALKAL---VGPQALCFF--KKNDKLML 1048
+W+ + T +E+GAE+ LAAYEAL L AL Q L F K+ D+
Sbjct: 947 MLWDFYLNVTHHSTIATETGAELHLAAYEALTYVLAALSTACSSQFLDFVEAKQTDQ--- 1003
Query: 1049 SAVEGKPLLDSWVQAFLQNINALLAAGVLARARRAILLNWKW---LCLESLLSLPYCGLE 1105
A E LD V FL NIN LL G L R+RRA+L+ WK L S + C
Sbjct: 1004 -ACEFS--LDILVTTFLDNINHLLTDGTLTRSRRAVLMTWKMMMQLAKSSWILHLSCNKR 1060
Query: 1106 NGANCSYFFSDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCR 1165
A + S + IF++L N L +R LF G S C
Sbjct: 1061 RVAPIAALLSAILHPAIFSNLEMHQTNEKGPGPLKWMRV------LFGMLQGGINTSPCV 1114
Query: 1166 GVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWF 1225
G Q R AP+ A H++ F
Sbjct: 1115 GSSMQ-------------------RHAPVCA--------------SAHVV---------F 1132
Query: 1226 VEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELA 1285
VE +L EG+KSPRTIRLAALHL+GLWL P +++Y++ELKLL+LYGSVAFDEDFEAEL+
Sbjct: 1133 VENLLNEGSKSPRTIRLAALHLSGLWLMYPKTLRFYMEELKLLSLYGSVAFDEDFEAELS 1192
Query: 1286 ENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQDALD 1345
EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF +L Q + S E +AL+
Sbjct: 1193 ENHEARFEVSMLAQSPDREFTEVFINTELYARVSVAVLFHQLWKQIK-EKSILETAEALE 1251
Query: 1346 SGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFL 1405
GKLFLL LLD VN+KDL++ELYKKYS++HRRKVR WQMIC+LS +V++DIVG+VT +
Sbjct: 1252 CGKLFLLELLDSAVNNKDLSKELYKKYSSVHRRKVRVWQMICVLSHYVEDDIVGEVTSSI 1311
Query: 1406 HISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVI 1465
HI LYRNNLP+VRQYLET A+ +YLKFP+L EQL+PI D MR QALSSYVFIAANVI
Sbjct: 1312 HICLYRNNLPAVRQYLETCAVLLYLKFPTLAEEQLIPIFHDKGMRQQALSSYVFIAANVI 1371
Query: 1466 LHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLE 1525
LH+ ++VQ HL LLPPI+P LTSHHHSLR FTQLLV+ VL +L+PTL TS+ E
Sbjct: 1372 LHSRQSVQIYHLNQLLPPILPFLTSHHHSLRSFTQLLVHSVLSRLWPTLHLETSEDAVFE 1431
Query: 1526 KSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLM 1585
+ CF++LK YLA+NSDC RLR S+ G+LD +DPN S TP+ IF +R + +FECVP S+M
Sbjct: 1432 RRCFQELKDYLAENSDCVRLRVSIEGFLDVFDPNASGTPSGIFSSRPEVSDFECVPVSVM 1491
Query: 1586 EQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLL 1645
E+V+ FLNDVREDLR ++AKD VTIKNE L +GE L DK S +L
Sbjct: 1492 ERVIEFLNDVREDLRQAVAKDTVTIKNEDLAVGEH----RNLEKSDKSGSEVVKTGQDVL 1547
Query: 1646 DFQKKITLPKHENQ----DNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIR 1701
DFQKKIT + Q + S G+ + + E+E++D++F+ L+AR A ETI+
Sbjct: 1548 DFQKKITPHRDSEQALNLNARGHSGIGDESISRIVSEMEEDDQVFNLALEARLHAAETIK 1607
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
SRQ+ ++VASL+DRIPNLAGL RTCEVF+A+GL +AD ++L DKQF+LISVTAEKW+P+
Sbjct: 1608 QSRQELIVVASLVDRIPNLAGLTRTCEVFRAAGLVVADKSVLQDKQFRLISVTAEKWLPV 1667
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
EVPV+S+K +LERK+ EG+SV+GLEQTA+S PLD ++FP +TVLVLGREKEGIPVDIIH
Sbjct: 1668 TEVPVDSVKAYLERKRGEGYSVIGLEQTAHSRPLDGFVFPDRTVLVLGREKEGIPVDIIH 1727
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+LDAC+EIPQLGVVRSLNVHVSGAIA+WEYTRQ R
Sbjct: 1728 ILDACVEIPQLGVVRSLNVHVSGAIAVWEYTRQLR 1762
>gi|359495741|ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
Length = 920
Score = 1179 bits (3051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/883 (67%), Positives = 695/883 (78%), Gaps = 36/883 (4%)
Query: 830 KFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKT 889
KFIQ G I + N+V ++MKFLI TL+ +QE+QIMQER ++C +++RTKSE ++
Sbjct: 28 KFIQMYGTKIFRAINNVEWVTMKFLIFTLSLVQELQIMQERTADCSVKVRTKSEFGFAES 87
Query: 890 VDQFSYAEASIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGP 949
++Q S +EASI EK N+F +LEELV ++NLSCSIFWS +A E+ NLP S+ GKLGGP
Sbjct: 88 INQLSSSEASIATEKFVNVFVYILEELVTYANLSCSIFWSGVATEDGNLPCSIKGKLGGP 147
Query: 950 SQRRLSFSTTTVVLQA---------IMSVKAVASISSWCARLKRNASIEFAYDFMWNLFW 1000
SQRRL ST+T VLQA IMS+K VASISSWC +LK +AS+ A++F+W FW
Sbjct: 148 SQRRLPLSTSTSVLQAVWFLALFINIMSMKTVASISSWCVQLKSDASLNLAFNFLWKSFW 207
Query: 1001 KTIQSPTSDSESGAEVCLAAYEALASALKALVG---PQALCFFKKNDKLMLSAVEGKPLL 1057
K I T DSE GAE+ LAAYEALA LKA++ P AL +NDK ML EGKPLL
Sbjct: 208 KIISCTTCDSEIGAEIHLAAYEALAPVLKAVISVFSPLALDLIGENDKSMLQKAEGKPLL 267
Query: 1058 DSWVQAFLQNINALLAAGVLARARRAILLNWKWLCLESLLSLPYCGLENGAN---CSYFF 1114
DS V FLQ+IN+LL G LAR RRAIL+NWKW CLESLLS+PY L+NG + C+ FF
Sbjct: 268 DSLVLTFLQDINSLLGFGALARTRRAILMNWKWHCLESLLSIPYYALKNGVHLEPCATFF 327
Query: 1115 SDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWH 1174
SD R IF+DLVESLENAGEGS+LPMLRSVRL L LF S GS+VSSC G+D QMMWH
Sbjct: 328 SDAAARRIFSDLVESLENAGEGSVLPMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWH 387
Query: 1175 LVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGT 1234
LVRSSWILH+SCNKRRVAPIAALLS+VLH SVF++E MH+ +N PGPLKWFVEK+LEEG
Sbjct: 388 LVRSSWILHVSCNKRRVAPIAALLSAVLHSSVFNDEGMHVTDNGPGPLKWFVEKILEEGA 447
Query: 1235 KSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEV 1294
KSPRTIRLAALHL+GLWL+NP IKYY+KELKLLTLYGSVAFDEDFEAELAEN+DA+ EV
Sbjct: 448 KSPRTIRLAALHLSGLWLSNPQTIKYYMKELKLLTLYGSVAFDEDFEAELAENHDARNEV 507
Query: 1295 SLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKE---CQDALDSGKLFL 1351
SLLAKSP PELTE FINTELYARVSVAVLF KLAD ++VG E C+ A++SGKLFL
Sbjct: 508 SLLAKSPDPELTEIFINTELYARVSVAVLFCKLADLADMVGPINENDDCRAAIESGKLFL 567
Query: 1352 LGLLDFVVNDKDLARELYKKYS-----------------AIHRRKVRAWQMICILSRFVD 1394
L LLD VVND DL++ELYKKYS AIHR K+RAWQMIC+LSRF+
Sbjct: 568 LELLDSVVNDTDLSKELYKKYSRKWAFGIKTSDTLVVAGAIHRHKIRAWQMICVLSRFIH 627
Query: 1395 NDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQAL 1454
DIV +V+ FLHISLYRNNLPSVRQYLETFAI IYLKFPSLV +QLVPIL+DYDMRPQAL
Sbjct: 628 QDIVQRVSCFLHISLYRNNLPSVRQYLETFAIHIYLKFPSLVVDQLVPILQDYDMRPQAL 687
Query: 1455 SSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTL 1514
SSYVFIAANVILHA +AV+FRHL++LLPPI+PLLTSHHHSLRGFTQLLVYQ+ KLFP +
Sbjct: 688 SSYVFIAANVILHAPEAVRFRHLDELLPPIIPLLTSHHHSLRGFTQLLVYQIFFKLFP-V 746
Query: 1515 DFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE 1574
D G S+ +PLEK CF+DLKSYL KN+DC RLR SM+G+LDA+DPN S+TP+ IF +R +E
Sbjct: 747 DSGVSEILPLEKRCFKDLKSYLEKNTDCIRLRKSMAGFLDAFDPNNSVTPSGIFTDRVEE 806
Query: 1575 LEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEE 1634
LEFECVPTSLME V+ FLNDVREDLR +MAKD+VTIKNE L + ED +C E D +KE+
Sbjct: 807 LEFECVPTSLMEHVVTFLNDVREDLRCAMAKDMVTIKNERLCVDEDSNCTEISVDTNKEK 866
Query: 1635 SFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLL 1677
+ +PKD +DFQKKITL KHE QD SS SF + E K LL
Sbjct: 867 LLTLMPKDISVDFQKKITLGKHEKQDTSSRSFLDSNETCKPLL 909
>gi|356565384|ref|XP_003550921.1| PREDICTED: uncharacterized protein LOC100809637 [Glycine max]
Length = 834
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/899 (64%), Positives = 675/899 (75%), Gaps = 76/899 (8%)
Query: 967 MSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSESGAEVCLAAYEALAS 1026
MSVKA++ I W ++KR+A A+ FMW FW+T +S S SE GAE+ LAAYEAL S
Sbjct: 1 MSVKAISLILLWRYQIKRDAPHNSAFTFMWQFFWRTTRSSLSCSEMGAEISLAAYEALVS 60
Query: 1027 ALKALVG---PQALCFFKKNDKLMLSAVEGKPLLDSWVQAFLQNINALLAAGVLARARRA 1083
L+ L P + ++N++L S +EG+P LD +F+QNIN LL +GVLAR RRA
Sbjct: 61 VLRVLASTYFPHSFYLVEENEQL-FSEIEGRPRLDYMCVSFIQNINDLLGSGVLARTRRA 119
Query: 1084 ILLNWKWLCLESLLSLPYCGLENGANCS---YFFSDDVVRYIFNDLVESLENAGEGSLLP 1140
+LL KW+CLESLLS+P C +NG N FFSDD ++ IF
Sbjct: 120 VLLEIKWVCLESLLSIPSCAFKNGFNLEENPTFFSDDTLKCIF----------------- 162
Query: 1141 MLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSS 1200
G LV SC NKRRVA IAALLSS
Sbjct: 163 -----------------GDLVESC----------------------NKRRVASIAALLSS 183
Query: 1201 VLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKY 1260
VLH VF++E MH +N PGPLKWF+E +LEEG KSPRTIRLAALHLTGLWL NP IIK+
Sbjct: 184 VLHPLVFNDENMHQTDNAPGPLKWFIENLLEEGIKSPRTIRLAALHLTGLWLLNPRIIKF 243
Query: 1261 YIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSV 1320
Y+KELKLL+LYGSVAFDEDFEAELA+N DA+ EVS+LA+SP PELTEAFINTE+YARVSV
Sbjct: 244 YLKELKLLSLYGSVAFDEDFEAELADNNDARLEVSILARSPDPELTEAFINTEVYARVSV 303
Query: 1321 AVLFSKLADQTEIVGSAKE---CQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHR 1377
AVLF KLAD +VGS E C A +SGK FLL LLD VVNDKDLA+ELYKKYSAIHR
Sbjct: 304 AVLFYKLADLARMVGSPNEDANCIAAQESGKSFLLELLDSVVNDKDLAKELYKKYSAIHR 363
Query: 1378 RKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVA 1437
RK+RAWQ+IC+LS FV+ DIVG+V +L+ISL RNNLP+VRQYLETFAI IYLKFPSLV
Sbjct: 364 RKIRAWQIICVLSPFVEEDIVGKVLEYLYISLNRNNLPAVRQYLETFAINIYLKFPSLVK 423
Query: 1438 EQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRG 1497
E LVPILRDYDMR QALSSYVFIAANVIL++SK VQ HL +L PP+VPLLTSHHHSLRG
Sbjct: 424 EHLVPILRDYDMRQQALSSYVFIAANVILNSSKDVQSSHLNELFPPLVPLLTSHHHSLRG 483
Query: 1498 FTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYD 1557
FTQLL YQ+L KLFP L++G+S+ +PLEK CF DLK+YLA+NSDC RLR SM GYLDAYD
Sbjct: 484 FTQLLAYQILHKLFPLLNYGSSEMLPLEKRCFVDLKTYLARNSDCARLRTSMEGYLDAYD 543
Query: 1558 PNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKI 1617
PN S+TPA IF+NR +E FECVPTSLMEQ D REDLR SMAKDVVTI+NE+L
Sbjct: 544 PNSSVTPAGIFINRVEEDGFECVPTSLMEQ------DAREDLRCSMAKDVVTIRNETLNF 597
Query: 1618 GEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLL 1677
D +C E LS + + KD DFQKK+T KH+ N + +GN E YK+L
Sbjct: 598 NGDKNCIENLSGGIE----GTMLKDMSSDFQKKVTFTKHDKGGNEAGFLYGNDETYKKLA 653
Query: 1678 EIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
EIE++D L DQ+LQ+R +++ +ASRQ F+LVASL+DRIPNLAGLARTCEVF+ASGLAI
Sbjct: 654 EIERDDLLLDQLLQSRRSSLDQQKASRQNFILVASLLDRIPNLAGLARTCEVFRASGLAI 713
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
AD I++DKQFQLISVTAEKWVPI+EVPV+SIK +L++KK EGFS+LGLEQTANS+PLDQ
Sbjct: 714 ADTKIINDKQFQLISVTAEKWVPIIEVPVDSIKIYLQKKKKEGFSILGLEQTANSVPLDQ 773
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
Y+FPKK VLVLGREKEGIPVDIIH+LDACIEIPQ GVVRSLNVHVSGAIALWEYTRQQR
Sbjct: 774 YIFPKKMVLVLGREKEGIPVDIIHILDACIEIPQFGVVRSLNVHVSGAIALWEYTRQQR 832
>gi|218191897|gb|EEC74324.1| hypothetical protein OsI_09608 [Oryza sativa Indica Group]
Length = 1489
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/780 (61%), Positives = 601/780 (77%), Gaps = 20/780 (2%)
Query: 1089 KWLCLESLLSLPYCGLENGANCSYF---FSDDVVRYIFNDLVESLENAGEGSLLPMLRSV 1145
+WLCL+SLLS C EN + FS+ +R IF D++ESLENAGE S+L +LR V
Sbjct: 717 EWLCLDSLLSFSCCRGENESLLKMLYPLFSESTLRSIFVDIIESLENAGENSVLAILRCV 776
Query: 1146 RLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYS 1205
R L L +SS G+ +MM V+SSWILH+SCNKRRVAPIAALLS+VLH +
Sbjct: 777 RSVLGLLHFSMRTRNLSSL-GISYEMMMQFVKSSWILHLSCNKRRVAPIAALLSAVLHPA 835
Query: 1206 VFSEEEMHM-MENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKE 1264
+F EMH E PGPLKWF+E +L EG+KSPRTIRLAALHL+G+WL P + +Y++E
Sbjct: 836 IFPNLEMHQENEKGPGPLKWFIENLLGEGSKSPRTIRLAALHLSGIWLMYPKTLSFYMEE 895
Query: 1265 LKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLF 1324
LKLL+LYGSVAFDEDFEAEL+EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF
Sbjct: 896 LKLLSLYGSVAFDEDFEAELSENHEARLEVSMLAQSPDREFTEVFINTELYARVSVAVLF 955
Query: 1325 SKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQ 1384
L Q E V S E ++AL SGKLFLL LLD VNDKD++RELYKKYS++HRRKVR WQ
Sbjct: 956 DHLWKQIE-VKSTLETEEALRSGKLFLLKLLDSAVNDKDISRELYKKYSSVHRRKVRIWQ 1014
Query: 1385 MICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPIL 1444
MIC+LS++V++DIV +VT +HI LYRNNLP+VRQYLETFAI IYLKFP+L EQL+PI
Sbjct: 1015 MICVLSQYVEDDIVKEVTSSIHICLYRNNLPAVRQYLETFAILIYLKFPALAEEQLIPIF 1074
Query: 1445 RDYDMRPQALSSYVFIAANVILHASK-AVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLV 1503
D +MR QALSSYVFIAAN+ILH+ + AVQ HL +L PPI+P LTSHHHSLRGFTQLLV
Sbjct: 1075 HDNEMRQQALSSYVFIAANLILHSRELAVQINHLNELFPPIMPFLTSHHHSLRGFTQLLV 1134
Query: 1504 YQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSIT 1563
+ VL K+ L G+S+ E+ CF+DLK YLA+N+DC RLRAS+ +LD ++P+ S T
Sbjct: 1135 HCVLSKMGSVLALGSSENPVFERRCFQDLKRYLAENTDCVRLRASVERFLDVFNPDTSGT 1194
Query: 1564 PAVIFVNR-DKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPD 1622
P+ IF +R + +FECVP S+ME+V+NFLNDVREDLR S+AKD +TIKNE L
Sbjct: 1195 PSGIFSSRPEVSFDFECVPVSVMERVINFLNDVREDLRQSIAKDSITIKNEDL------- 1247
Query: 1623 CAETLSDLDK-EESFSQL--PKDSLLDFQKKITLPKHENQ--DNSSSSFFGNREAYKQLL 1677
AE D+ +E+ +L P +L+FQKKIT ++ +Q + S G+ + LL
Sbjct: 1248 TAEMHHKEDRTDENIVELLEPSQDVLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLL 1307
Query: 1678 EIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
++E +D+ D L++R+ A+ETI+ S+QQ ++VASL+DRIPNLAGL RTCE+FKA GLA+
Sbjct: 1308 DLEGDDQQLDLALESRNHAVETIKQSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAV 1367
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
AD +I+ DKQF+LISVTAEKW+P++EVPVNS+K FLE+K+ EG+SV+GLEQTANS PLD
Sbjct: 1368 ADKSIIEDKQFRLISVTAEKWLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDH 1427
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ FP KTVLVLGREKEGIPVDIIH+LDAC+EIPQLG+VRSLNVHVSGAIA+WEYTRQQR
Sbjct: 1428 FSFPSKTVLVLGREKEGIPVDIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI 1487
Score = 282 bits (721), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 216/370 (58%), Gaps = 33/370 (8%)
Query: 245 NLLWYLCNMTERLLLQSVEHRSCA--IAFLLPIILKAFVSLCSSEISFHGHIYI-LSRKC 301
NL W L ++ + S E+RSCA + ++ A VS + + + LSR
Sbjct: 191 NLTWDLSSLALNMFGHSQEYRSCATRVLLKPLLLSLADVSCVTVHLELAAAPQLKLSRSG 250
Query: 302 FFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREF 361
F + IW C +LF+LG ER DA+ +LSLYLS + + E+D+R +F
Sbjct: 251 FLESIWASCLSLFALGPAERLDAYNILSLYLSTLKHVILGPD--------EYDLRNSNDF 302
Query: 362 WEEIKRGLVDEEGLVRKQSLHILKAVLQI--RGENQGHSGVSDMRS-----QGKNSTARG 414
W+EI+RGLVD++ LVRKQ+L+IL+ L I E+ G S RS Q K++TA
Sbjct: 303 WDEIRRGLVDKDSLVRKQALYILRISLDIFSSSEDNGAQQCSRRRSAALPAQDKSNTA-- 360
Query: 415 MTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQ 474
MTKR+ WA KEAKSLG+G++ S D G+ +W+ F+LLYEML+EY THLVEAAW HQ
Sbjct: 361 MTKRERWAQKEAKSLGIGEMSQS-DENCSSGKDRWKVFLLLYEMLQEYGTHLVEAAWTHQ 419
Query: 475 ITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEI------FDWLSVLWERGFCHGNPQVRYM 528
+ LL + + P S H ++ ++ F W+ VLWERGF H NPQVRY+
Sbjct: 420 VMLLFE------STPRSDYSNHMSYTVFHAQMESFEGFFHWMVVLWERGFTHDNPQVRYL 473
Query: 529 IMQSFLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFL 588
+M SFL I W+ Y C + VP F+LGP + GLND VHHKDFG KGVY S+ I+ A F
Sbjct: 474 VMHSFLDITWEHYLVCPQIVPRGFVLGPLLRGLNDVVHHKDFGVKGVYDSKIIKGAERFF 533
Query: 589 HQYASFLDTR 598
YA L TR
Sbjct: 534 GLYAQRLTTR 543
Score = 107 bits (268), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 701 KLWFPVCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQ 760
K VCE+V++A SL+ E+PL LL+FISA+PREFTDY G LR V++W
Sbjct: 549 KYRLKVCEQVMKATTSLISAAEIPLNQLLYFISAIPREFTDYYGELRPMVQKWFV----- 603
Query: 761 QSANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIK 820
C S +L+ L DFP +F H ++ ++ DDED+ +WE++A+RWAR LV
Sbjct: 604 -EKKECSSGNTLLEKLIDFPTTFVKHTEVNGPYL-FDDEDVGAWEAEARRWARTLLLVTS 661
Query: 821 DEQDLAPVL 829
+EQ +
Sbjct: 662 EEQHFTQIF 670
>gi|222624007|gb|EEE58139.1| hypothetical protein OsJ_09050 [Oryza sativa Japonica Group]
Length = 1695
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/780 (61%), Positives = 601/780 (77%), Gaps = 20/780 (2%)
Query: 1089 KWLCLESLLSLPYCGLENGANCSYF---FSDDVVRYIFNDLVESLENAGEGSLLPMLRSV 1145
+WLCL+SLLS C EN + FS+ +R IF D++ESLENAGE S+L +LR V
Sbjct: 923 EWLCLDSLLSFSCCRGENESLLKMLYPLFSESTLRSIFVDIIESLENAGENSVLAILRCV 982
Query: 1146 RLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYS 1205
R L L +SS G+ +MM V+SSWILH+SCNKRRVAPIAALLS+VLH +
Sbjct: 983 RSVLGLLHFSMRTRNLSSL-GISYEMMMQFVKSSWILHLSCNKRRVAPIAALLSAVLHPA 1041
Query: 1206 VFSEEEMHM-MENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKE 1264
+F EMH E PGPLKWF+E +L EG+KSPRTIRLAALHL+G+WL P + +Y++E
Sbjct: 1042 IFPNLEMHQENEKGPGPLKWFIENLLGEGSKSPRTIRLAALHLSGIWLMYPKTLSFYMEE 1101
Query: 1265 LKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLF 1324
LKLL+LYGSVAFDEDFEAEL+EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF
Sbjct: 1102 LKLLSLYGSVAFDEDFEAELSENHEARLEVSMLAQSPDREFTEVFINTELYARVSVAVLF 1161
Query: 1325 SKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQ 1384
L Q E V S E ++AL SGKLFLL LLD VNDKD++RELYKKYS++HRRKVR WQ
Sbjct: 1162 DHLWKQIE-VKSTLETEEALRSGKLFLLKLLDSAVNDKDISRELYKKYSSVHRRKVRIWQ 1220
Query: 1385 MICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPIL 1444
MIC+LS++V++DIV +VT +HI LYRNNLP+VRQYLETFAI IYLKFP+L EQL+PI
Sbjct: 1221 MICVLSQYVEDDIVKEVTSSIHICLYRNNLPAVRQYLETFAILIYLKFPALAEEQLIPIF 1280
Query: 1445 RDYDMRPQALSSYVFIAANVILHASK-AVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLV 1503
D +MR QALSSYVFIAAN+ILH+ + AVQ HL +L PPI+P LTSHHHSLRGFTQLLV
Sbjct: 1281 HDNEMRQQALSSYVFIAANLILHSRELAVQINHLNELFPPIMPFLTSHHHSLRGFTQLLV 1340
Query: 1504 YQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSIT 1563
+ VL K+ L G+S+ E+ CF+DLK YLA+N+DC RLRAS+ +LD ++P+ S T
Sbjct: 1341 HCVLSKMGSVLALGSSENPVFERRCFQDLKRYLAENTDCVRLRASVERFLDVFNPDTSGT 1400
Query: 1564 PAVIFVNR-DKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPD 1622
P+ IF +R + +FECVP S+ME+V+NFLNDVREDLR S+AKD +TIKNE L
Sbjct: 1401 PSGIFSSRPEVSFDFECVPVSVMERVINFLNDVREDLRQSIAKDSITIKNEDLT------ 1454
Query: 1623 CAETLSDLDK-EESFSQL--PKDSLLDFQKKITLPKHENQ--DNSSSSFFGNREAYKQLL 1677
AE D+ +E+ +L P +L+FQKKIT ++ +Q + S G+ + LL
Sbjct: 1455 -AEMHHKEDRTDENIVELLEPSQDVLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLL 1513
Query: 1678 EIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
++E +D+ D L++R+ A+ETI+ S+QQ ++VASL+DRIPNLAGL RTCE+FKA GLA+
Sbjct: 1514 DLEGDDQQLDLALESRNHAVETIKQSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAV 1573
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
AD +I+ DKQF+LISVTAEKW+P++EVPVNS+K FLE+K+ EG+SV+GLEQTANS PLD
Sbjct: 1574 ADKSIIEDKQFRLISVTAEKWLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDH 1633
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ FP KTVLVLGREKEGIPVDIIH+LDAC+EIPQLG+VRSLNVHVSGAIA+WEYTRQQR
Sbjct: 1634 FSFPSKTVLVLGREKEGIPVDIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI 1693
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/783 (40%), Positives = 448/783 (57%), Gaps = 66/783 (8%)
Query: 245 NLLWYLCNMTERLLLQSVEHRSCA--IAFLLPIILKAFVSLCSSEISFHGHIYI-LSRKC 301
NL W L ++ + S E+RSCA + ++ A VS + + + LSR
Sbjct: 191 NLTWDLSSLALNMFGHSQEYRSCATRVLLHPLLLSLADVSCVTVHLELAAAPQLKLSRSG 250
Query: 302 FFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREF 361
F + IW C +LF+LG ER DA+ +LSLYLS + + E+D+R +F
Sbjct: 251 FLESIWASCLSLFALGPAERLDAYNILSLYLSTLKHVILGPD--------EYDLRNSNDF 302
Query: 362 WEEIKRGLVDEEGLVRKQSLHILKAVLQI--RGENQGHSGVSDMRS-----QGKNSTARG 414
W+EI+RGLVD++ LVRKQ+L+IL+ L I E+ G S RS Q K++TA
Sbjct: 303 WDEIRRGLVDKDSLVRKQALYILRISLDIFSSSEDNGAQQCSRRRSAALPAQDKSNTA-- 360
Query: 415 MTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQ 474
MTKR+ WA KEAKSLG+G++ S D G+ +W+ F+LLYEML+EY THLVEAAW HQ
Sbjct: 361 MTKRERWAQKEAKSLGIGEMSQS-DENCSSGKDRWKVFLLLYEMLQEYGTHLVEAAWTHQ 419
Query: 475 ITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEI------FDWLSVLWERGFCHGNPQVRYM 528
+ LL + + P S H ++ ++ F W+ VLWERGF H NPQVRY+
Sbjct: 420 VMLLFE------STPRSDYSNHMSYTVFHAQMESFEGFFHWMVVLWERGFTHDNPQVRYL 473
Query: 529 IMQSFLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFL 588
+M SFL I W+ Y C + VP F+LGP + GLND VHHKDFG KGVY S+ I+ A F
Sbjct: 474 VMHSFLDITWEHYLVCPQIVPRGFVLGPLLRGLNDVVHHKDFGVKGVYDSKIIKGAERFF 533
Query: 589 HQYASFLDTRKQIAFLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGD 648
YA L TR ++ + +L+S AKQ SFGR GLMALA C+AS AC H+ C
Sbjct: 534 GLYAQRLTTRDRLHLVWSLSSSAKQDSFGRAGLMALAFCVASCAC----HLNTNDLPCDS 589
Query: 649 AFPEKVPEECSPENFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCE 708
A E +C+ + + DLLD L + E SKQHFNP YRL+ VCE
Sbjct: 590 AGQEMA--KCNGDAHTKVNIEDLLDALMILCEKSKQHFNPKYRLK------------VCE 635
Query: 709 KVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKS 768
+V++A SL+ E+PL LL+FISA+PREFTDY G LR V++W C S
Sbjct: 636 QVMKATTSLISAAEIPLNQLLYFISAIPREFTDYYGELRPMVQKWFV------EKKECSS 689
Query: 769 RMLVLKSLNDFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPV 828
+L+ L DFP +F H ++ ++ DDED+ +WE++A+RWAR LV +EQ +
Sbjct: 690 GNTLLEKLIDFPTTFVKHTEVNGPYLF-DDEDVGAWEAEARRWARTLLLVTSEEQHFTQI 748
Query: 829 LKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLK 888
F++ G N+ ++ CI +KF I+ L ++E+++ +R I + I S +
Sbjct: 749 FVFLEKYGNNLSEEYPTGECIQVKFFIIVLCLIEELEVKHKRL------IHQNNTI-SKE 801
Query: 889 TVDQFSYAEASIFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGG 948
D + E ++KLA +LE +V FS SCSIFW + E+ +LPSSV GKLGG
Sbjct: 802 GSDSSNGLEHHALNKKLAKFLLIILENMVIFSRTSCSIFWLRNS-EDMDLPSSVKGKLGG 860
Query: 949 PSQRRLSFSTTTVVLQAIMSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTS 1008
PSQRRL STT++VLQAI S+++++SI +WC + S+ F W W+ IQ +
Sbjct: 861 PSQRRLPTSTTSLVLQAIWSMRSISSIVTWCNNYCSDISLCSTLTFFWEFCWEVIQHHSY 920
Query: 1009 DSE 1011
+E
Sbjct: 921 ATE 923
>gi|108705676|gb|ABF93471.1| RNA methyltransferase, TrmH family protein, expressed [Oryza sativa
Japonica Group]
Length = 1727
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/780 (61%), Positives = 601/780 (77%), Gaps = 20/780 (2%)
Query: 1089 KWLCLESLLSLPYCGLENGANCSYF---FSDDVVRYIFNDLVESLENAGEGSLLPMLRSV 1145
+WLCL+SLLS C EN + FS+ +R IF D++ESLENAGE S+L +LR V
Sbjct: 955 EWLCLDSLLSFSCCRGENESLLKMLYPLFSESTLRSIFVDIIESLENAGENSVLAILRCV 1014
Query: 1146 RLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYS 1205
R L L +SS G+ +MM V+SSWILH+SCNKRRVAPIAALLS+VLH +
Sbjct: 1015 RSVLGLLHFSMRTRNLSSL-GISYEMMMQFVKSSWILHLSCNKRRVAPIAALLSAVLHPA 1073
Query: 1206 VFSEEEMHM-MENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKE 1264
+F EMH E PGPLKWF+E +L EG+KSPRTIRLAALHL+G+WL P + +Y++E
Sbjct: 1074 IFPNLEMHQENEKGPGPLKWFIENLLGEGSKSPRTIRLAALHLSGIWLMYPKTLSFYMEE 1133
Query: 1265 LKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLF 1324
LKLL+LYGSVAFDEDFEAEL+EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF
Sbjct: 1134 LKLLSLYGSVAFDEDFEAELSENHEARLEVSMLAQSPDREFTEVFINTELYARVSVAVLF 1193
Query: 1325 SKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQ 1384
L Q E V S E ++AL SGKLFLL LLD VNDKD++RELYKKYS++HRRKVR WQ
Sbjct: 1194 DHLWKQIE-VKSTLETEEALRSGKLFLLKLLDSAVNDKDISRELYKKYSSVHRRKVRIWQ 1252
Query: 1385 MICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPIL 1444
MIC+LS++V++DIV +VT +HI LYRNNLP+VRQYLETFAI IYLKFP+L EQL+PI
Sbjct: 1253 MICVLSQYVEDDIVKEVTSSIHICLYRNNLPAVRQYLETFAILIYLKFPALAEEQLIPIF 1312
Query: 1445 RDYDMRPQALSSYVFIAANVILHASK-AVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLV 1503
D +MR QALSSYVFIAAN+ILH+ + AVQ HL +L PPI+P LTSHHHSLRGFTQLLV
Sbjct: 1313 HDNEMRQQALSSYVFIAANLILHSRELAVQINHLNELFPPIMPFLTSHHHSLRGFTQLLV 1372
Query: 1504 YQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSIT 1563
+ VL K+ L G+S+ E+ CF+DLK YLA+N+DC RLRAS+ +LD ++P+ S T
Sbjct: 1373 HCVLSKMGSVLALGSSENPVFERRCFQDLKRYLAENTDCVRLRASVERFLDVFNPDTSGT 1432
Query: 1564 PAVIFVNRDK-ELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPD 1622
P+ IF +R + +FECVP S+ME+V+NFLNDVREDLR S+AKD +TIKNE L
Sbjct: 1433 PSGIFSSRPEVSFDFECVPVSVMERVINFLNDVREDLRQSIAKDSITIKNEDLT------ 1486
Query: 1623 CAETLSDLDK-EESFSQL--PKDSLLDFQKKITLPKHENQ--DNSSSSFFGNREAYKQLL 1677
AE D+ +E+ +L P +L+FQKKIT ++ +Q + S G+ + LL
Sbjct: 1487 -AEMHHKEDRTDENIVELLEPSQDVLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLL 1545
Query: 1678 EIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
++E +D+ D L++R+ A+ETI+ S+QQ ++VASL+DRIPNLAGL RTCE+FKA GLA+
Sbjct: 1546 DLEGDDQQLDLALESRNHAVETIKQSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAV 1605
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
AD +I+ DKQF+LISVTAEKW+P++EVPVNS+K FLE+K+ EG+SV+GLEQTANS PLD
Sbjct: 1606 ADKSIIEDKQFRLISVTAEKWLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDH 1665
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ FP KTVLVLGREKEGIPVDIIH+LDAC+EIPQLG+VRSLNVHVSGAIA+WEYTRQQR
Sbjct: 1666 FSFPSKTVLVLGREKEGIPVDIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI 1725
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 320/815 (39%), Positives = 447/815 (54%), Gaps = 98/815 (12%)
Query: 245 NLLWYLCNMTERLLLQSVEHRSCA--IAFLLPIILKAFVSLCSSEISFHGHIYI-LSRKC 301
NL W L ++ + S E+RSCA + ++ A VS + + + LSR
Sbjct: 191 NLTWDLSSLALNMFGHSQEYRSCATRVLLHPLLLSLADVSCVTVHLELAAAPQLKLSRSG 250
Query: 302 FFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREF 361
F + IW C +LF+LG ER DA+ +LSLYLS + + E+D+R +F
Sbjct: 251 FLESIWASCLSLFALGPAERLDAYNILSLYLSTLKHVILGPD--------EYDLRNSNDF 302
Query: 362 WEEIKRGLVDEEGLVRKQSLHILKAVLQI--RGENQGHSGVSDMRS-----QGKNSTARG 414
W+EI+RGLVD++ LVRKQ+L+IL+ L I E+ G S RS Q K++TA
Sbjct: 303 WDEIRRGLVDKDSLVRKQALYILRISLDIFSSSEDNGAQQCSRRRSAALPAQDKSNTA-- 360
Query: 415 MTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQ 474
MTKR+ WA KEAKSLG+G++ S D G+ +W+ F+LLYEML+EY THLVEAAW HQ
Sbjct: 361 MTKRERWAQKEAKSLGIGEMSQS-DENCSSGKDRWKVFLLLYEMLQEYGTHLVEAAWTHQ 419
Query: 475 ITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEI------FDWLSVLWERGFCHGNPQVRYM 528
+ LL + + P S H ++ ++ F W+ VLWERGF H NPQVRY+
Sbjct: 420 VMLLFE------STPRSDYSNHMSYTVFHAQMESFEGFFHWMVVLWERGFTHDNPQVRYL 473
Query: 529 IMQSFLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFG----------------- 571
+M SFL I W+ Y C + VP F+LGP + GLND VHHKDF
Sbjct: 474 VMHSFLDITWEHYLVCPQIVPRGFVLGPLLRGLNDVVHHKDFEFEVEILKNTALLHQNYL 533
Query: 572 ---------------TKGVYSSRTIERAASFLHQYASFLDTRKQIAFLSNLASVAKQQSF 616
KGVY S+ I+ A F YA L TR ++ + +L+S AKQ SF
Sbjct: 534 AIFRADSVPKPKVDCVKGVYDSKIIKGAERFFGLYAQRLTTRDRLHLVWSLSSSAKQDSF 593
Query: 617 GRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEECSPENFPCNDKSDLLDFLR 676
GR GLMALA C+AS AC H+ C A E +C+ + + DLLD L
Sbjct: 594 GRAGLMALAFCVASCAC----HLNTNDLPCDSAGQEMA--KCNGDAHTKVNIEDLLDALM 647
Query: 677 FVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASLMCTFEVPLEILLHFISALP 736
+ E SKQHFNP YRL+ VCE+V++A SL+ E+PL LL+FISA+P
Sbjct: 648 ILCEKSKQHFNPKYRLK------------VCEQVMKATTSLISAAEIPLNQLLYFISAIP 695
Query: 737 REFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTC 796
REFTDY G LR V++W C S +L+ L DFP +F H ++ ++
Sbjct: 696 REFTDYYGELRPMVQKWFV------EKKECSSGNTLLEKLIDFPTTFVKHTEVNGPYLF- 748
Query: 797 DDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICKQSNHVRCISMKFLIL 856
DDED+ +WE++A+RWAR LV +EQ + F++ G N+ ++ CI +KF I+
Sbjct: 749 DDEDVGAWEAEARRWARTLLLVTSEEQHFTQIFVFLEKYGNNLSEEYPTGECIQVKFFII 808
Query: 857 TLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVDQFSYAEASIFHEKLANLFPNVLEEL 916
L ++E+++ +R I + I S + D + E ++KLA +LE +
Sbjct: 809 VLCLIEELEVKHKRL------IHQNNTI-SKEGSDSSNGLEHHALNKKLAKFLLIILENM 861
Query: 917 VCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFSTTTVVLQAIMSVKAVASIS 976
V FS SCSIFW + E+ +LPSSV GKLGGPSQRRL STT++VLQAI S+++++SI
Sbjct: 862 VIFSRTSCSIFWLRNS-EDMDLPSSVKGKLGGPSQRRLPTSTTSLVLQAIWSMRSISSIV 920
Query: 977 SWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSE 1011
+WC + S+ F W W+ IQ + +E
Sbjct: 921 TWCNNYCSDISLCSTLTFFWEFCWEVIQHHSYATE 955
>gi|357121068|ref|XP_003562244.1| PREDICTED: uncharacterized protein LOC100841607 [Brachypodium
distachyon]
Length = 1710
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/779 (60%), Positives = 586/779 (75%), Gaps = 29/779 (3%)
Query: 1089 KWLCLESLLSLPYCGLENGANCSYF---FSDDVVRYIFNDLVESLENAGEGSLLPMLRSV 1145
+WLC++SLLS+ C EN + FSD +R IF D+ ESLENAGE S++ +LR V
Sbjct: 948 EWLCVDSLLSVSCCCDENESQLKRLGPIFSDSTLRSIFLDITESLENAGENSVVSILRCV 1007
Query: 1146 RLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYS 1205
R L L +SS G+ +MM LV SSW+LH+SCNKRRVAPIAALLS++LH S
Sbjct: 1008 RSVLGLLQFNMMNGNLSSL-GISYEMMMQLVESSWVLHLSCNKRRVAPIAALLSAILHPS 1066
Query: 1206 VFSEEEMHMM-ENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKE 1264
+F EMH E GPLKWFVE +L EG+KSPRTIRLAALHLTGLWL P +K+Y++E
Sbjct: 1067 IFPNLEMHQTNEKGKGPLKWFVENLLNEGSKSPRTIRLAALHLTGLWLMYPKTLKFYMEE 1126
Query: 1265 LKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLF 1324
LKLL LYGSVAFDEDFEAEL+EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF
Sbjct: 1127 LKLLALYGSVAFDEDFEAELSENHEARFEVSMLAQSPNREFTEVFINTELYARVSVAVLF 1186
Query: 1325 SKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQ 1384
+L Q S E ++AL SGKLFLL LLD VND DL +ELYKKYS++HRRKVR WQ
Sbjct: 1187 HQLWKQIN-EKSCLETEEALQSGKLFLLKLLDSAVNDNDLLKELYKKYSSVHRRKVRVWQ 1245
Query: 1385 MICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPIL 1444
MIC+LS +V++DIV +VT +H LYRNNLP+VRQYLETFAI IYLKFP+L +QLVPI
Sbjct: 1246 MICVLSHYVEDDIVKEVTSNVHTCLYRNNLPAVRQYLETFAILIYLKFPTLAEKQLVPIF 1305
Query: 1445 RDYDMRPQALSSYVFIAANVILHASK-AVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLV 1503
D MR QALSSYVFIAANVILH+ + VQ HL LLPPI+P LTSHHHSLR FTQLLV
Sbjct: 1306 HDNGMRQQALSSYVFIAANVILHSREPVVQRNHLNQLLPPIIPFLTSHHHSLRSFTQLLV 1365
Query: 1504 YQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSIT 1563
+ VL KL+P L S+ +E+ CF+DLK YLA+N+DC RLR S+ G+LD +DPN S T
Sbjct: 1366 HCVLSKLWPILQLENSEDPFIERRCFQDLKKYLAENTDCARLRVSIEGFLDVFDPNTSGT 1425
Query: 1564 PAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDC 1623
P+ IF R + FECVP S++E+V +FLNDVRE+LR+SM KD VTIKNE L +G+
Sbjct: 1426 PSGIFTARPESSGFECVPMSVLERVNDFLNDVREELRHSMIKDSVTIKNEDLAVGKH--- 1482
Query: 1624 AETLSDLDKEESFSQLPKDSLLDFQKKITLPKHEN----QDNSSSSFFGNREAYKQLLEI 1679
+++K + SQ DFQKKI +P+ + + S+ + GN + + L EI
Sbjct: 1483 -----EMEKIIA-SQ-------DFQKKI-IPQRDRDCCEEGLSNGAIMGNNDISRLLFEI 1528
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E++DE+F+ +++R A ET+R S+Q+ ++VASL++RIPNLAGL RTCE+FKA GL +AD
Sbjct: 1529 EEDDEVFNLAVESRKEAAETVRRSQQELIVVASLVERIPNLAGLTRTCEIFKAGGLVVAD 1588
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
++ DKQF+LISVTAEKWVP++EVPV S+K FLE+K+ EG++V+GLEQTANS PLD++
Sbjct: 1589 KSVAEDKQFRLISVTAEKWVPMMEVPVESVKVFLEKKRSEGYTVIGLEQTANSKPLDEFC 1648
Query: 1800 FPKKTVLVLGREKEGIPVDII-HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
FPKKTVLVLGREKEGIPVDII ++D C+EIPQLGVVRSLNVHVS AIA+W+YTRQQR
Sbjct: 1649 FPKKTVLVLGREKEGIPVDIIQQVVDVCVEIPQLGVVRSLNVHVSAAIAIWDYTRQQRL 1707
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 375/1010 (37%), Positives = 559/1010 (55%), Gaps = 75/1010 (7%)
Query: 13 VSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLDLSKDAIKEGQKLDSDQCNYI 72
+++L S F+ VPP AIP ++DC+L S+ +S S +F SLLD S + Q
Sbjct: 3 LAALESCFRAVPPEAIPAVVDCVLASSSTSPSQLFHSLLD-SFPKVHALQPNHGHGHAVP 61
Query: 73 ASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVLNQISESFF 132
S ALCHLL LG + DA + +W F+PL+ +R + ++ Q+
Sbjct: 62 LSHAAALCHLLSHLGE--------SKDALRMLLWTVFLPLL-LRE--DVQLQQQVISLMC 110
Query: 133 DVVTKTNTWINLEKTLVP-CIFS-SVGFSLGVLQNEESDAIEWGSCSPFQGSKGETNASD 190
D V+ +W L +T++P CI S +V L + +D S + +
Sbjct: 111 DAVSSNQSWELLGETILPFCIRSCAVAMDLPITHEYAAD----DSTMYYYLWDWDAGDDH 166
Query: 191 MDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCYA--EKFAANLLW 248
+ +L LS++ TL L ++ AL+ + +T SLL+ A + NL W
Sbjct: 167 TSEAGLLPLSKATTL------LASLLGHALKRRR---NTLSLLQEDADASLDSLVKNLTW 217
Query: 249 YLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFFKKIWK 308
+ + ++L E+RSCA LL +L + + S + F LSR F + IW
Sbjct: 218 DMSRLVLKMLAHGQEYRSCATKNLLHPLLISITHVSSVTVKFGTVQLKLSRSGFLESIWN 277
Query: 309 CCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSD-RSDRGEEFDIRAVREFWEEIKR 367
C +LFSLG ER DA+ +LSLY +S+ G + + +++ + FD+R + EFW+E++R
Sbjct: 278 SCVSLFSLGRAERLDAYDILSLY--FSALKSGQQYAVLGANQVQNFDLRNITEFWDELRR 335
Query: 368 GLVDEEGLVRKQSLHILKAVLQI----RGENQGHSGVSD--MRSQGKNSTARGMTKRDLW 421
GLVD++ LVRK++ +ILK L I ENQ S S + Q K++TA +T+++ W
Sbjct: 336 GLVDKDSLVRKRAFYILKISLSIFSSGNDENQQCSARSPSALPVQAKSNTA--VTRKERW 393
Query: 422 AVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQF 481
A KEAKSLGV ++ S + GQ +W+ F+LLYEML+E+ THLVEAAW HQ+ LL +
Sbjct: 394 ANKEAKSLGVEEITQSGE-HCSSGQDRWKVFVLLYEMLQEFGTHLVEAAWTHQVMLLFES 452
Query: 482 SLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSY 541
+ D L + RA ++ IF W++VLWE GF H NPQVR ++MQSFL I W+ Y
Sbjct: 453 TPQGDYLNHISYRAFHAQMESVEGIFHWMTVLWECGFNHDNPQVRCLVMQSFLDIAWEHY 512
Query: 542 ENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQI 601
+ + +P F+LGP + GLND VHHKDFG GVY+S TI+ A F YA L T ++
Sbjct: 513 KGYTQMIPRGFVLGPLIRGLNDVVHHKDFGVGGVYNSETIKGAERFFSNYARELMTSDRL 572
Query: 602 AFLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEECSPE 661
+ NLAS AKQ SFGR GLM LA C+AS AC + + C A E +C+ +
Sbjct: 573 HLVWNLASAAKQDSFGRAGLMTLAFCVASCAC----QSDTQYLSCASAVKELA--KCNGD 626
Query: 662 NFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASLMCTF 721
+ +DLLD L + E SKQHFNP YRL+ VCE+V++AAASL+
Sbjct: 627 ISIAVNATDLLDALWILSERSKQHFNPKYRLK------------VCEQVIKAAASLISAA 674
Query: 722 EVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLNDFPI 781
++PL LL+FIS +PREFTD G LRA V++W N C R +L+ L DFP
Sbjct: 675 DIPLTQLLNFISTIPREFTDCFGPLRATVQKWFV------QKNECFERNTLLE-LIDFPT 727
Query: 782 SFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGINICK 841
+F H + + DD+D+ +WE++A+RW+R LV +EQ +L F++ G + +
Sbjct: 728 TFMKHTGVVGPDLY-DDDDVGAWEAEARRWSRALLLVTSEEQHFKQILMFLEKCGNKLSE 786
Query: 842 QSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVDQFSYAEASIF 901
S + +KF IL + ++E+++ Q+++ ++ I + + + E
Sbjct: 787 HSPMGESVQVKFFILIFSLIEELEVQQKKFV-------YQNNIITDGGSEWTNGVEHCAL 839
Query: 902 HEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPSQRRLSFSTTTV 961
+EKLA +VLE +V FS SCS+FW + + +LP SV GKLGGPSQRRL+ S T+
Sbjct: 840 NEKLAKSLLSVLENMVVFSKQSCSVFWLR-STDIMDLPCSVKGKLGGPSQRRLATSITSS 898
Query: 962 VLQAIMSVKAVASISSWCARLKRNASIEFAYDFMWNLFWKTIQSPTSDSE 1011
VLQ + S++ ++S+ SWC + S+ A+ F+W WK IQ T+ +E
Sbjct: 899 VLQCVWSMRCISSVVSWCKHYTSDVSLHSAFSFLWEFCWKVIQHCTNATE 948
>gi|414864220|tpg|DAA42777.1| TPA: oleosin 16 kDa, mRNA [Zea mays]
Length = 721
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/694 (61%), Positives = 538/694 (77%), Gaps = 17/694 (2%)
Query: 1149 LDLFASGSSGSLVSSCRGVDTQ---MMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYS 1205
+ LF GS+ + C V T+ MM L +SSWILH++CNKRRVAPIAALLS+VLH +
Sbjct: 1 MTLFLPGSTIARRRRCGLVRTEEFEMMMQLAKSSWILHLNCNKRRVAPIAALLSAVLHPA 60
Query: 1206 VFSEEEMHMM-ENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKE 1264
+F EMH E PGPLKWFVE +L EG+KSPRTIRLAALHL+GLWL P +++Y++E
Sbjct: 61 IFCNLEMHQTNEKGPGPLKWFVENLLNEGSKSPRTIRLAALHLSGLWLMYPKTLRFYMEE 120
Query: 1265 LKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLF 1324
LKLL+LYGSVAFDEDFEAEL+EN++A+ EVS+LA+SP E TE FINTELYARVSVAVLF
Sbjct: 121 LKLLSLYGSVAFDEDFEAELSENHEARFEVSMLAQSPDREFTEVFINTELYARVSVAVLF 180
Query: 1325 SKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQ 1384
+L Q + S E ++AL+ GKLFLL LLD VN KDL++ELYKKYS++HRRKVR WQ
Sbjct: 181 HQLWKQIK-EHSILETEEALECGKLFLLELLDSAVNSKDLSKELYKKYSSVHRRKVRVWQ 239
Query: 1385 MICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPIL 1444
MIC+LS +V++DIVG+VT +HI LYRNNLP+VRQYLETFAI +YLKFP+L EQL+PI
Sbjct: 240 MICVLSHYVEDDIVGEVTSSIHICLYRNNLPAVRQYLETFAILLYLKFPTLAEEQLIPIF 299
Query: 1445 RDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVY 1504
D MR QALSSYVFIAANVILH+ ++VQ HL LLPPI+P LTSHHHSLRGFTQLLV+
Sbjct: 300 HDKGMRQQALSSYVFIAANVILHSRQSVQIYHLNQLLPPILPFLTSHHHSLRGFTQLLVH 359
Query: 1505 QVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITP 1564
VL +L+PTL TS+ E+ CF++LK YLA+NSDC RLR S+ G+LD +DPN S TP
Sbjct: 360 SVLSRLWPTLHPETSEDAVFERRCFQELKDYLAENSDCVRLRVSIEGFLDVFDPNASGTP 419
Query: 1565 AVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCA 1624
IF R + +FECVP S+ME+V+ FLNDVREDLR ++A D VTIKNE L +GE
Sbjct: 420 PGIFSARPEVSDFECVPVSVMERVIEFLNDVREDLRQAIANDTVTIKNEDLAVGEHHKSD 479
Query: 1625 ETLSDLDKEESFSQLPKDSLLDFQKKITLPKHE-----NQDNSSSSFFGNREAYKQLLEI 1679
E++S++ K +LDFQKKIT + + N + S G+ + + E+
Sbjct: 480 ESVSEMVK-------TGQEVLDFQKKITPHRGDSEQALNLNTRGHSGVGDEYISRIISEM 532
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E++D++FD L+AR A ETI+ SRQ+ ++VASL++RIPNLAGL RTCEVF+A+GL +AD
Sbjct: 533 EEDDQVFDLALEARLHAAETIKQSRQELIVVASLVERIPNLAGLTRTCEVFRAAGLVVAD 592
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
++L DKQF+LISVTAEKW+P+ EVPV+S+K +LERK+ +G+SV+GLEQTANS+PLD++
Sbjct: 593 KSVLQDKQFRLISVTAEKWLPVTEVPVDSVKAYLERKRGDGYSVIGLEQTANSMPLDRFG 652
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
FP +TVLVLGREKEGIPVDIIH+LDAC+EIPQLG
Sbjct: 653 FPDRTVLVLGREKEGIPVDIIHILDACVEIPQLG 686
>gi|297745669|emb|CBI40923.3| unnamed protein product [Vitis vinifera]
Length = 6988
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/598 (61%), Positives = 439/598 (73%), Gaps = 18/598 (3%)
Query: 9 VGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLD----LSKDAIKEGQKL 64
+ SLVSSL +SF+ VP A IP MLDCIL +T SS S++F LLD L+KD K+G+KL
Sbjct: 1 MASLVSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDIAKDGKKL 60
Query: 65 DSDQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVL 124
DSDQCN+++S V +CHLL+ +G N DAFQSF WK FIPLMK+ HA + E+L
Sbjct: 61 DSDQCNHVSSFVCGVCHLLEK--------SGVNSDAFQSFTWKCFIPLMKIVHACDREML 112
Query: 125 NQISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKG 184
NQ +ESF DVV KTN+W LE+TLVP + SVG S+G+LQNEES +W S Q S
Sbjct: 113 NQTTESFVDVVIKTNSWGVLEETLVPFLIRSVGLSMGMLQNEESAIYQWTGSSVSQVSIQ 172
Query: 185 ETNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGC-YAEKFA 243
+ N SDM +E M LS LP SCHILT ++D+AL++ AP+T+ +L N C YAE FA
Sbjct: 173 QRNYSDMIEESMFPLS----LPISCHILTSILDAALQSHPEAPTTNLILANECCYAENFA 228
Query: 244 ANLLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFF 303
+LLW LCN++ +LL QS EHRSC I+FLLP+I KAFVS + EIS HG Y+LSR CF
Sbjct: 229 GHLLWDLCNISVQLLSQSWEHRSCTISFLLPLIFKAFVSHKTFEISAHGKTYVLSRTCFL 288
Query: 304 KKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFWE 363
K+IW CC+ LFSLGTLERRDA+TVLSLYLSY S TEG E+ + SD+ +EFDIR EFW
Sbjct: 289 KEIWSCCKALFSLGTLERRDAYTVLSLYLSYFSSTEGCEDVNASDKAKEFDIRTESEFWG 348
Query: 364 EIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWAV 423
EIKRGLVD+EGLVRKQSLHILK +L + +Q + GV + S KNS+ RGMTKR WA
Sbjct: 349 EIKRGLVDKEGLVRKQSLHILKTILDVNEGSQCYPGVPEKVSHQKNSSPRGMTKRGRWAD 408
Query: 424 KEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFSL 483
KEAKSLGVGK+C S DL L QQ+W AFILLYEMLEEY THLVEAAWNHQITLLL FS
Sbjct: 409 KEAKSLGVGKICQSVDLFLT-SQQRWLAFILLYEMLEEYGTHLVEAAWNHQITLLLHFSF 467
Query: 484 PHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYEN 543
P++++ G QN + EIF+WLS+LWERG CH NPQVR +IMQSFLGIEWK + +
Sbjct: 468 PNNSINSLNGEIFQNQMSSLEEIFNWLSILWERGLCHDNPQVRCLIMQSFLGIEWKKHRD 527
Query: 544 CAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQI 601
AKSVPESF+ G FM+ LNDPVHHKDFG KGVYSSRTIE A FL QY S+L+ R I
Sbjct: 528 FAKSVPESFVFGSFMQALNDPVHHKDFGVKGVYSSRTIEGATRFLQQYTSYLNARYDI 585
>gi|224138736|ref|XP_002326677.1| predicted protein [Populus trichocarpa]
gi|222833999|gb|EEE72476.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 575 bits (1481), Expect = e-160, Method: Compositional matrix adjust.
Identities = 291/458 (63%), Positives = 343/458 (74%), Gaps = 3/458 (0%)
Query: 115 MRHAFEPEVLNQISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWG 174
M HAFE E+LN+I+ESFF VV+ T++W LE LVP SVG S+G++QNEESDA EW
Sbjct: 1 MVHAFEREMLNEIAESFFCVVSSTHSWGVLEANLVPFFLRSVGLSIGMIQNEESDAFEWD 60
Query: 175 SCSPFQGSKGETNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLE 234
S + G N D+D+E MLSLS S LP SCHILTL++D+AL++ QA ST S+L
Sbjct: 61 HFSIYHGLSDLENDFDLDQEPMLSLSGSFPLPISCHILTLILDAALQSFQAVSSTKSMLA 120
Query: 235 NG-CYAEKFAANLLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGH 293
NG C EK +NLLW LCNM+ERLL QS+EHRSC I FLLPII KA S CS EI+ HG
Sbjct: 121 NGFCDVEKLFSNLLWDLCNMSERLLSQSLEHRSCTIGFLLPIIFKALGSQCSLEITVHGK 180
Query: 294 IYILSRKCFFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEF 353
++ILSR FF+KIWK CR+LFSLG LERRDA+ VLSLYLS+ S TEG N D S + EEF
Sbjct: 181 MFILSRNVFFRKIWKLCRSLFSLGHLERRDAYNVLSLYLSFFSLTEGFGNVDASVKAEEF 240
Query: 354 DIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTAR 413
D+RA REFW+EIKRGLVDEEGLVRKQSLHILK VLQI G +Q HSGVS+ +SQ K+
Sbjct: 241 DVRAEREFWDEIKRGLVDEEGLVRKQSLHILKTVLQISGGSQCHSGVSEKKSQEKHPVPH 300
Query: 414 GMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNH 473
GMTKR++WA KEAKSLGV + C S D L QQQWEAFILLYEML+EY THLVEAAW+H
Sbjct: 301 GMTKREMWADKEAKSLGVWEPCNSADSPLN-SQQQWEAFILLYEMLQEYGTHLVEAAWHH 359
Query: 474 QITLLLQFSLPHDNLPGSTGRA-HQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQS 532
Q+ LLLQFS+ ++N R HQ E F W+++LW+ GF H NPQVR +IM+S
Sbjct: 360 QLNLLLQFSVSNNNFTSYIFRGFHQKQTDILREAFSWVTILWQLGFQHDNPQVRCLIMES 419
Query: 533 FLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDF 570
FLGIEW Y N AKSV ESF+LGPF+EGLNDPVHHKDF
Sbjct: 420 FLGIEWMKYGNTAKSVSESFVLGPFIEGLNDPVHHKDF 457
>gi|147866931|emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]
Length = 988
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/471 (60%), Positives = 345/471 (73%), Gaps = 18/471 (3%)
Query: 9 VGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLD----LSKDAIKEGQKL 64
+ SLVSSL +SF+ VP A IP MLDCIL +T SS S++F LLD L+KD K+G+KL
Sbjct: 1 MASLVSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDIAKDGKKL 60
Query: 65 DSDQCNYIASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMKMRHAFEPEVL 124
DSDQCN+++S V +CHLL+ +G N DAFQSF WK FIPLMK+ HA + E+L
Sbjct: 61 DSDQCNHVSSFVCGVCHLLEK--------SGVNSDAFQSFTWKCFIPLMKIVHACDREML 112
Query: 125 NQISESFFDVVTKTNTWINLEKTLVPCIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKG 184
NQ +ESF DVV KTN+W LE+TLVP + SVG S+G+LQNEES +W S Q S
Sbjct: 113 NQTTESFVDVVIKTNSWGVLEETLVPFLIRSVGLSMGMLQNEESAIYQWTGSSVSQVSIQ 172
Query: 185 ETNASDMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGC-YAEKFA 243
+ N SDM +E M LS LP SCHILT ++D+AL++ AP+T+ +L N C YAE FA
Sbjct: 173 QQNYSDMIEESMFPLS----LPISCHILTSILDAALQSHPEAPTTNLILANECCYAENFA 228
Query: 244 ANLLWYLCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFF 303
+LLW LCN++ +LL QS EHRSC I+FLLP+I KAFVS + EIS HG Y+LSR CF
Sbjct: 229 GHLLWDLCNISVQLLSQSWEHRSCTISFLLPLIFKAFVSHKTFEISAHGKTYVLSRTCFL 288
Query: 304 KKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFWE 363
K+IW CC+ LFSLGTLERRDA+TVLSLYLSY S TEG E+ + SD+ +EFDIRA EFW
Sbjct: 289 KEIWSCCKALFSLGTLERRDAYTVLSLYLSYFSSTEGCEDVNASDKAKEFDIRAESEFWG 348
Query: 364 EIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWAV 423
EIKRGLVD+EGLVRKQSLHILK +L + +Q + GV + S KNS+ RGMTKR WA
Sbjct: 349 EIKRGLVDKEGLVRKQSLHILKTILDVNEGSQCYPGVPEKVSHQKNSSPRGMTKRGRWAD 408
Query: 424 KEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQ 474
KEAKSLGVGK+C S DL L QQ+W AFILLYEMLEEY THLVEAAWNHQ
Sbjct: 409 KEAKSLGVGKICQSVDLFLTS-QQRWLAFILLYEMLEEYGTHLVEAAWNHQ 458
>gi|414864222|tpg|DAA42779.1| TPA: hypothetical protein ZEAMMB73_700328 [Zea mays]
Length = 917
Score = 528 bits (1359), Expect = e-146, Method: Compositional matrix adjust.
Identities = 350/979 (35%), Positives = 518/979 (52%), Gaps = 102/979 (10%)
Query: 13 VSSLVSSFKLVPPA-AIPPMLDCILTSTGSSASAIFFSLLDLSKDAIKEGQKLDSDQCNY 71
V++L S F+ + A A+P ++DC+L S+ SS+ + F L ++ SD+
Sbjct: 9 VAALESCFRALSAADAVPAVVDCVLASSASSSPSQLFHAL------LRSFPPSQSDRHAA 62
Query: 72 IASMVGALCHLLKTLGAGYIFIAGANHDAFQSFMWKSFIPLMK-MRHAFEPEVLNQISES 130
I AL HLL L + +A + +W+ F+PL++ + P + + E
Sbjct: 63 ICH-AAALRHLLAQLDS-----PPKVREALRLLLWRVFLPLLQDIIEPTHPAHFDLVIEM 116
Query: 131 FFDVVTKTNTWINLEKTLVP-CIFSSVGFSLGVLQNEESDAIEWGSCSPFQGSKGETNAS 189
+ V+ T W L T+V CI SSV ++G L ++++I + S E +
Sbjct: 117 MCNAVSDTGCWDLLGATIVSFCIRSSV-VAMG-LSAADANSILYQSIM-------EADFP 167
Query: 190 DMDKECMLSLSRSITLPTSCHILTLVMDSALRNLQAAPSTDSLLENGCYAEKFAANLLWY 249
C+L LS S + +L ++ L + P++ E NL W
Sbjct: 168 AETLSCLLPLSNSSS------VLASLLVDMLERRRTIPTSQ---EGAADLAALVQNLTWD 218
Query: 250 LCNMTERLLLQSVEHRSCAIAFLLPIILKAFVSLCSSEISFHGHIYILSRKCFFKKIWKC 309
L + ++ + E+RSCA LL +L + + S +SF + LSR F + IW
Sbjct: 219 LAKLVLKMFTHAQEYRSCATRVLLQPVLISLTDVSSVTVSFGAVQHKLSRFGFLECIWNS 278
Query: 310 CRTLFSLGTLERRDAFTVLSLYLSYSSYTEGSENSDRS-DRGEEFDIRAVREFWEEIKRG 368
C +LF LG ER DA+ +LS+Y +S+ G + + +EFD++ V EFW+E++RG
Sbjct: 279 CISLFPLGPGERLDAYRILSVY--FSTLKSGHQAAVLGVGIVQEFDLKNVSEFWDELRRG 336
Query: 369 LVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNS------TARGMTKRDLWA 422
LVD++ LVRKQ+ ++L L I + G+ S+ + G TKR+ WA
Sbjct: 337 LVDKDSLVRKQAFYVLTISLSIFTSSSGNDSCQHFSSRSPAALPAQIKANAGETKRERWA 396
Query: 423 VKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFS 482
KEAKSLGVG++ S + GQ +W+ F+LLYEML+EY THLVEAAW H + L + +
Sbjct: 397 NKEAKSLGVGEMDQSGE-NCSNGQDRWKVFLLLYEMLQEYGTHLVEAAWTHHVVRLFECT 455
Query: 483 LPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYE 542
L +D L ++ A ++ I W++VLWERGF H NPQVR ++MQSFL I W+ Y+
Sbjct: 456 LQNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIAWERYK 515
Query: 543 NCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIA 602
C +P F+LGP + GLND VHHKDFG G YSS+TI+ A F Y L +I
Sbjct: 516 VCTHIIPRGFVLGPLIRGLNDVVHHKDFGIGGAYSSKTIKDAQRFFRTYTHNLARCDRIH 575
Query: 603 FLSNLASVAKQQSFGRVGLMALAECIASAA---------CGVAAHIENKAECCGDAFPEK 653
+ +LAS AKQ SFGR GLM LA C+AS C ++ K + C
Sbjct: 576 LVWSLASAAKQDSFGRAGLMTLASCVASCTRQSETNDVPCAISGKAVTKCDGC------- 628
Query: 654 VPEECSPENFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEA 713
VP E P +DLLD L + E SKQHFNP YRL+ VCE+V++
Sbjct: 629 VPTEVRP--------TDLLDVLWILSERSKQHFNPKYRLK------------VCEQVIQV 668
Query: 714 AASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVL 773
A SL+ E+PL LLHFI+ +PREFTDY G LR V++W C +L
Sbjct: 669 ATSLINATEIPLNQLLHFIATIPREFTDYIGPLRVVVQKWFF------QKEECSPGDTLL 722
Query: 774 KSLNDFPISFTSHP--SLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKF 831
L DF +F S SN F DDED+D+WE++A+RWAR LV ++E+ L + +F
Sbjct: 723 SKLIDFSATFVSQKRNEGSNVF---DDEDVDAWEAEARRWARTLLLVTEEEEHLKRIFRF 779
Query: 832 IQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVD 891
++ G + +Q I +KF I+ L+F++E+++ Q + + R+ + + T++
Sbjct: 780 LEAYGYKLSEQCPSGDFIPIKFFIIVLSFIEELELRQRK-----LVCRSNTILRGSDTLN 834
Query: 892 QFSYAEAS-IFHEKLANLFPNVLEELVCFSNLSCSIFWSNIAMEETNLPSSVIGKLGGPS 950
+ + +F E L +LE +V FS LSCSIFW ++ + +LP S+ GKLGGPS
Sbjct: 835 GLVLDDLNKMFTESLL----LILENMVAFSKLSCSIFWLDV--DNKDLPPSIKGKLGGPS 888
Query: 951 QRRLSFSTTTVVLQAIMSV 969
QRRL+ S T+ VLQ + SV
Sbjct: 889 QRRLATSITSSVLQGVCSV 907
>gi|110740266|dbj|BAF02030.1| hypothetical protein [Arabidopsis thaliana]
Length = 253
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/256 (73%), Positives = 217/256 (84%), Gaps = 4/256 (1%)
Query: 1602 SMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN 1661
SMAKDVVTIKNE KI E+P +S D+E +L + S LDFQ+KITL KHE QD
Sbjct: 2 SMAKDVVTIKNEGFKIDEEPKRRLIMSTTDEE----RLSEPSSLDFQRKITLSKHEKQDA 57
Query: 1662 SSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLA 1721
SS+S N E YK+L E+EKEDEL Q+L++RS+ +E +++ RQ +LVASL+DRIPNLA
Sbjct: 58 SSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLA 117
Query: 1722 GLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGF 1781
GLARTCEVFKAS LA+ADA+I+HDKQFQLISVTAEKWVPI+EVPVNS+K FLE+KK EGF
Sbjct: 118 GLARTCEVFKASSLAVADASIIHDKQFQLISVTAEKWVPIMEVPVNSLKLFLEKKKREGF 177
Query: 1782 SVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVH 1841
S+LGLEQTANS+ LD+Y FPKKTVLVLGREKEGIPVDIIH+LDACIEIPQLGVVRSLNVH
Sbjct: 178 SILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLNVH 237
Query: 1842 VSGAIALWEYTRQQRF 1857
VSGAIALWEYTRQQR
Sbjct: 238 VSGAIALWEYTRQQRI 253
>gi|226506254|ref|NP_001145273.1| uncharacterized protein LOC100278565 [Zea mays]
gi|195653915|gb|ACG46425.1| hypothetical protein [Zea mays]
Length = 286
Score = 360 bits (923), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/286 (60%), Positives = 225/286 (78%), Gaps = 12/286 (4%)
Query: 1576 EFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEES 1635
+FECVP S+ME+V+ FLNDVREDLR ++A D VTIKNE L +GE E++S++ K
Sbjct: 5 DFECVPVSVMERVIEFLNDVREDLRQAIANDTVTIKNEDLAVGEHHKSDESVSEMVK--- 61
Query: 1636 FSQLPKDSLLDFQKKITLPKHE-----NQDNSSSSFFGNREAYKQLLEIEKEDELFDQVL 1690
+LDFQKKIT + + N + S G+ + + E+E++D++FD L
Sbjct: 62 ----TGQEVLDFQKKITPHRGDSEQALNLNTRGHSGVGDEYISRIISEMEEDDQVFDLAL 117
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL 1750
+AR A ETI+ SRQ+ ++VASL++RIPNLAGL RTCEVF+A+GL +AD ++L DKQF+L
Sbjct: 118 EARLHAAETIKQSRQELIVVASLVERIPNLAGLTRTCEVFRAAGLVVADKSVLQDKQFRL 177
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
ISVTAEKW+P+ EVPV+S+K +LERK+ +G+SV+GLEQTANS+PLD++ FP +TVLVLGR
Sbjct: 178 ISVTAEKWLPVTEVPVDSVKAYLERKRGDGYSVIGLEQTANSMPLDRFGFPDRTVLVLGR 237
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
EKEGIPVDIIH+LDAC+EIPQLGVVRSLNVHVSGAIA+WEYTRQQR
Sbjct: 238 EKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAIAVWEYTRQQR 283
>gi|359495743|ref|XP_003635078.1| PREDICTED: probable methyltransferase TARBP1-like [Vitis vinifera]
Length = 279
Score = 330 bits (845), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/196 (82%), Positives = 179/196 (91%), Gaps = 3/196 (1%)
Query: 1661 NSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNL 1720
NS +SF+ R EIEKED+L DQ+LQ+RS+AME IR+S+Q F+LVASLIDRIPNL
Sbjct: 85 NSMNSFYTKRGLGH---EIEKEDQLLDQLLQSRSVAMERIRSSQQHFILVASLIDRIPNL 141
Query: 1721 AGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEG 1780
AGLARTCEVFKA+GLAIAD NILHDKQFQLISVTAEKWVPIVEVPV+S+K FLE+KK EG
Sbjct: 142 AGLARTCEVFKAAGLAIADTNILHDKQFQLISVTAEKWVPIVEVPVSSVKVFLEKKKQEG 201
Query: 1781 FSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNV 1840
FS+LGLEQTANS+PLD+Y+FPKK VLVLGREKEGIPVDIIH+LDACIEIPQLGVVRSLNV
Sbjct: 202 FSILGLEQTANSVPLDKYIFPKKIVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLNV 261
Query: 1841 HVSGAIALWEYTRQQR 1856
HVSGAIALWEYTRQQR
Sbjct: 262 HVSGAIALWEYTRQQR 277
>gi|115450091|ref|NP_001048646.1| Os03g0100500 [Oryza sativa Japonica Group]
gi|113547117|dbj|BAF10560.1| Os03g0100500, partial [Oryza sativa Japonica Group]
Length = 220
Score = 297 bits (761), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 181/216 (83%), Gaps = 2/216 (0%)
Query: 1644 LLDFQKKITLPKHENQ--DNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIR 1701
+L+FQKKIT ++ +Q + S G+ + LL++E +D+ D L++R+ A+ETI+
Sbjct: 3 VLNFQKKITPYRNFDQPLNVGGHSVVGDDYISRLLLDLEGDDQQLDLALESRNHAVETIK 62
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
S+QQ ++VASL+DRIPNLAGL RTCE+FKA GLA+AD +I+ DKQF+LISVTAEKW+P+
Sbjct: 63 QSQQQLIVVASLVDRIPNLAGLTRTCEIFKAVGLAVADKSIIEDKQFRLISVTAEKWLPM 122
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
+EVPVNS+K FLE+K+ EG+SV+GLEQTANS PLD + FP KTVLVLGREKEGIPVDIIH
Sbjct: 123 MEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDHFSFPSKTVLVLGREKEGIPVDIIH 182
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+LDAC+EIPQLG+VRSLNVHVSGAIA+WEYTRQQR
Sbjct: 183 VLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQRI 218
>gi|348679512|gb|EGZ19328.1| hypothetical protein PHYSODRAFT_495108 [Phytophthora sojae]
Length = 1386
Score = 237 bits (605), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 306/656 (46%), Gaps = 85/656 (12%)
Query: 1223 KWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEA 1282
+W E P I A L W +P + EL L LY DE +
Sbjct: 783 RWITEFTRFGSRHRPNVIFHLACRLCQTWRAHPASALRFADELVELLLYKEPLIDE--KE 840
Query: 1283 ELAENYDAKTEV-SLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQ 1341
+LA + A SPV + I T+ R V+ S L D V S + Q
Sbjct: 841 QLATDATAGAPFQGFQGFSPVNDDQVVAIKTDAKDRFVRLVVLSFLDDVA--VDSTADSQ 898
Query: 1342 DALDSGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIV 1398
+++ LL L ++ + K++ S +K+R+WQ +CI+S +
Sbjct: 899 QLMNALLTRLLAL--------NVTPDWQKQHMLNSDGFGKKLRSWQALCIISAHTTKPQL 950
Query: 1399 GQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFP-SLVAEQLVPILRDYDMRPQALSSY 1457
++ L + LPSVR Y+E F + + KFP + + L+P+LRD ++ PQ +S
Sbjct: 951 TELLPTLRTAFAVPQLPSVRYYMELFGMRMATKFPREICSGLLLPMLRDANLMPQVGASL 1010
Query: 1458 VFIAANVILHASKAVQFRHLE----DLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPT 1513
+ +AA + A+ + L+ +LL ++P L + H R Q L+ +VL +
Sbjct: 1011 LLVAAYL---ANYKLDDDSLDVDCGELLETMLPWLNTSHGYTRVLAQFLLAKVLPRHIHQ 1067
Query: 1514 LDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLS-----------I 1562
L +S L E YL+ N +C R+ + L+ + P+ I
Sbjct: 1068 LQTESSDTPGLR--FLEGTARYLSNNKECKRMLRRQARQLEEFRPDYESSLLGMLSSGFI 1125
Query: 1563 TPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPD 1622
+ + RD+ L F EQ+ +N++ +Y + ++ + K E P
Sbjct: 1126 SEFGELLPRDEALRFS-------EQLKTAMNELYA--QYQL-ENFTPAPASTDKPTEAPP 1175
Query: 1623 CAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKE 1682
L+ K ++ + L +DS LP D F R
Sbjct: 1176 ATAALTVQRKIDTTALLLEDS--------ALPSAMRAD-----FDATRRG---------- 1212
Query: 1683 DELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI 1742
L AR + RQ ++ ASL+D+IPNLAGLARTCE+F A L + + +
Sbjct: 1213 -----DTLNAR-------QRPRQPLIMCASLVDKIPNLAGLARTCEIFNAQKLIVPNVRL 1260
Query: 1743 L-HDKQFQLISVTAEKWVPIVEV-PV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
HD F +S TA KW+P+ EV P+ + ++ L R K EG++++ +EQTANS+ L Y
Sbjct: 1261 AQHDVTFATVSATAHKWMPLEEVRPLGDDLRRALLRWKSEGYTIVAVEQTANSVSLANYT 1320
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P+K VLVLGREK+GIPVD++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 1321 LPRKMVLVLGREKKGIPVDVLQLVDVCVEIPQFGLVRSLNVHVSGALMLWEYTQQQ 1376
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 109/289 (37%), Gaps = 67/289 (23%)
Query: 356 RAVREFWEEIKR------GLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKN 409
+A REF + + L + L+RKQ LHILK H +S ++ N
Sbjct: 32 KAPREFIADTRLQKLVCVALRHNDALLRKQGLHILKVAF-------SHCAMSSEETETTN 84
Query: 410 STARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLE-EYSTHLVE 468
+K+AK D W+ F+ E+++ + HL+E
Sbjct: 85 -------------IKKAKLKSAKPTATWVD--------TWQNFLTASEVIQMHHEQHLIE 123
Query: 469 AAWNHQITLLLQFSL--PHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVR 526
W LL ++ + LP + + W P FDW+ L R F H NP V+
Sbjct: 124 QVWPQVADLLTKYLVVGTSSKLPQES----EQW--PVLLTFDWMQSLLVRLFAHDNPVVK 177
Query: 527 YMIMQSFLGI---EWKSYEN--------------CAKSVPESFLLGPFMEGLNDPVHHKD 569
+ + +F+ + W + N CA + + F+L + NDPV +K
Sbjct: 178 RLFISNFMEVCVQSWLTRHNVGYDIGVDHGALFACAPAF-QQFVLHNLLRACNDPVLYKH 236
Query: 570 FGTKGVYSSRTIERAASFLHQYASFLDTRKQIA-FLSNLASVAKQQSFG 617
+ +R A+FL + + T A L + S ++ FG
Sbjct: 237 -----AHRARFQALVANFLASFLALQITEGDEACVLDDFVSAIEEAIFG 280
>gi|302757075|ref|XP_002961961.1| hypothetical protein SELMODRAFT_77385 [Selaginella moellendorffii]
gi|302775416|ref|XP_002971125.1| hypothetical protein SELMODRAFT_95047 [Selaginella moellendorffii]
gi|300161107|gb|EFJ27723.1| hypothetical protein SELMODRAFT_95047 [Selaginella moellendorffii]
gi|300170620|gb|EFJ37221.1| hypothetical protein SELMODRAFT_77385 [Selaginella moellendorffii]
Length = 186
Score = 236 bits (603), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 141/179 (78%)
Query: 1677 LEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
L++E ED L ++ + + RQ ++VASL++RIPNLAGLARTCEVFKAS L
Sbjct: 1 LDVEYEDSLLFSLIDKKGRELAKAYEGRQDLIVVASLVERIPNLAGLARTCEVFKASALT 60
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+AD IL D+QF+LISVTAE+WVPI+EV ++ +LER K EG++VLGLEQTANS+ ++
Sbjct: 61 VADKKILEDRQFKLISVTAEQWVPILEVKEGALIRYLERMKDEGYAVLGLEQTANSVAVN 120
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
Y FP + VLVLGREK+GIPV++I LDAC+EIPQLG++RSLNVHVSGAIA+WEYT+Q
Sbjct: 121 NYSFPSRVVLVLGREKDGIPVNLIQTLDACLEIPQLGMIRSLNVHVSGAIAVWEYTKQH 179
>gi|301096908|ref|XP_002897550.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107010|gb|EEY65062.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 1346
Score = 234 bits (596), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 219/784 (27%), Positives = 359/784 (45%), Gaps = 90/784 (11%)
Query: 1092 CLESLLSLPYCGLENGANCSYFFSDDVVRYIFNDLVESLENAG--EGSLLPMLRSVRLTL 1149
C SL + + L S F ++R ++ VE+L AG +L+ M+ + LTL
Sbjct: 623 CAVSLAASKWILLHRVVKSSSFIDTKLLRATYDACVEALPTAGMDPSALIQMVNVLSLTL 682
Query: 1150 DLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSE 1209
A GSLV + + +D+ L+ W + N + P L+ + +F
Sbjct: 683 AQLA----GSLVQASKDIDS-----LLEEIWTAY---NDSKAKPDT--LTRAVVTCMFQP 728
Query: 1210 EEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLT 1269
+ E T W + P + A L W +P ++ EL L
Sbjct: 729 VFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPVSALSFVDELVELL 788
Query: 1270 LYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLAD 1329
LY DE + +LA + A + SP+ A + T R V+ S + D
Sbjct: 789 LYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKDRFVRLVMLSFVDD 845
Query: 1330 -QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQM 1385
+ S+ + Q D+ LL L ++ E K++ S +K+R+WQ
Sbjct: 846 VAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLNSDGFGKKLRSWQA 897
Query: 1386 ICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPS-LVAEQLVPIL 1444
+CI+S V + ++ L + LPSVR Y+E F + + KFP+ + + L+P+L
Sbjct: 898 LCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKFPTEICSGVLLPML 957
Query: 1445 RDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPLLTSHHHSLRGFTQ 1500
D ++ PQ +S + ++A ++ + L+ +LL ++P L + H G+T+
Sbjct: 958 GDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLEIMLPWLNTSH----GYTR 1010
Query: 1501 LLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDA--- 1555
+L +L K+ P S K E YL+ N +C R+ + LD
Sbjct: 1011 VLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRMLRRQARQLDEFHP 1070
Query: 1556 -YDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNES 1614
Y+ +L + F++ EL +P + L F E L+ +M + + E+
Sbjct: 1071 DYESSLLGMLSSGFISEFGEL----LPR---DDALRF----SEQLKTAMNELYAQYQLEN 1119
Query: 1615 LKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYK 1674
P +E S ++ + +L Q+KI +++ A
Sbjct: 1120 FP----PTPSEQKSSMETDSV------SGILTVQRKI----------DTTALLLVDSALP 1159
Query: 1675 QLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASG 1734
+ + + L AR + RQ ++ ASL+D++PNLAGLARTCE+F A
Sbjct: 1160 AAMRADFDAARRGATLNAR-------QRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQK 1212
Query: 1735 LAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLERKKHEGFSVLGLEQTAN 1791
L + + + D F +S TA KW+P+ EV + ++ L R K EG++++ +EQTA+
Sbjct: 1213 LVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTAS 1272
Query: 1792 SIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEY
Sbjct: 1273 SVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEY 1332
Query: 1852 TRQQ 1855
T+QQ
Sbjct: 1333 TQQQ 1336
Score = 45.4 bits (106), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 449 WEAFILLYEMLE-EYSTHLVEAAWNHQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIF 507
W++F+ E+++ + HL+E W Q++ LL+ L D+ + R+ Q W P F
Sbjct: 83 WQSFLTASEVIQMHHEQHLIEQVWP-QVSGLLKSYLIVDS--ANQQRSEQ-W--PVQLTF 136
Query: 508 DWLSVLWERGFCHGNPQVRYMIMQSFLGI---EWKSYE--------------NCAKSVPE 550
DW+ L R F H NP V+ + + F+ W+ ++ +CA + +
Sbjct: 137 DWMQSLLVRLFAHDNPVVKRLFISKFMETCVENWRLWDQNSTPNDVDHQASFSCAPAF-Q 195
Query: 551 SFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFL 588
F+L + N+P+ +K + + + + ASFL
Sbjct: 196 QFVLNNVLRACNNPMLYKQ-AHRARFQALVADFLASFL 232
>gi|224002194|ref|XP_002290769.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974191|gb|EED92521.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1947
Score = 227 bits (579), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 251/487 (51%), Gaps = 54/487 (11%)
Query: 1378 RKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVA 1437
R R+WQ +C+LSRF+ +DI V + + N +R ++E F I P +
Sbjct: 1498 RMTRSWQALCLLSRFITDDIAEYVAERVFRGMSNNTHGPLRYFIEVFTIQCTRMHPRVFG 1557
Query: 1438 EQLVPILRDYDMRPQALSSYVFIAANVIL---HASKAVQFRHLEDLLPPIVPLLTSHHHS 1494
E + + D+ Q +SS + I NVI+ ++ + ++++L ++P L+S
Sbjct: 1558 EFYIREINRKDLPLQYVSSLMVIGGNVIVGRYNSDFLSSKQRIKEVLCGVIPWLSSTQGF 1617
Query: 1495 LRGFTQLLVYQVLCKLFPTL------DFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRAS 1548
R +QLLVY KL P + D G ++ + S+L N++ RLR
Sbjct: 1618 SRAISQLLVY----KLIPLIVDVNAGDCGKIADSTRDEDVLRGIYSFLQMNNEMERLRKK 1673
Query: 1549 MSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVV 1608
+ D YD + + T + + E C P +++ + + L +V +++ S +V
Sbjct: 1674 QQHFFDTYDVDSTCTAEGLLSIPIDDGEEAC-PLHMIDSIKDCLAEVYKEVHGSDIDNVP 1732
Query: 1609 TIKNESLKIGEDPDCAETLS-DLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFF 1667
+ E L I D + ++ + D EE L++FQ+KI +P
Sbjct: 1733 YKQMEELLI----DAEQAINIEADTEEE--------LVNFQRKI-MP------------- 1766
Query: 1668 GNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTC 1727
+A ++ E +LF+ + +QQ V+ A+L+D++PNLAGLART
Sbjct: 1767 --LDALNLSIKSMHEQKLFNAAGK-----------KKQQLVVCATLVDKVPNLAGLARTS 1813
Query: 1728 EVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLE 1787
E+F A L I + + F+ IS +A W+ + E + +L +KK EGF+++GLE
Sbjct: 1814 EIFAAQTLVIPNLLVKKQDDFKSISASANDWIDMEECKEEDLLKWLYKKKAEGFTIVGLE 1873
Query: 1788 QTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIA 1847
QT++S + + FP+KTVL+LG+EKEGIPV + +D CIEIPQLG++RSLNVHV+GA+A
Sbjct: 1874 QTSSSKCITKTKFPEKTVLLLGKEKEGIPVQYLSAVDTCIEIPQLGIIRSLNVHVTGALA 1933
Query: 1848 LWEYTRQ 1854
+W+YT Q
Sbjct: 1934 IWKYTEQ 1940
>gi|301096902|ref|XP_002897547.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107007|gb|EEY65059.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 769
Score = 226 bits (577), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 206/740 (27%), Positives = 339/740 (45%), Gaps = 94/740 (12%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P
Sbjct: 93 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEGWTAY---NDSKAKPDT- 139
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 140 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 198
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 199 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 255
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 256 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 307
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 308 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 367
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 368 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 424
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 425 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 480
Query: 1546 RASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAK 1605
+ LD + P ++E ++ F+++ E L
Sbjct: 481 LRRQARQLDEFHP-----------------DYESSLLGMLSS--GFISEFGELLP----- 516
Query: 1606 DVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSS 1665
++++L+ E A E ++Q L +F + K + +S S
Sbjct: 517 -----RDDALRFSEQLKTA-------MNELYAQY---QLENFPPTPSEQKSSMETDSVSG 561
Query: 1666 FFG-NREAYKQLLEIEKEDELFDQVLQA------RSLAMETIRASRQQFVLVASLIDRIP 1718
F R+ L +E D ++A R + + RQ ++ ASL+D++P
Sbjct: 562 FLTVQRKIDTTALLLE--DSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVDKVP 619
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLER 1775
NLAGLARTCE+F A L + + + D F +S TA KW+P+ EV + ++ L R
Sbjct: 620 NLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVR 679
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
K EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ G+V
Sbjct: 680 WKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLV 739
Query: 1836 RSLNVHVSGAIALWEYTRQQ 1855
RSLNVHVSGA+ LWEYT+QQ
Sbjct: 740 RSLNVHVSGALVLWEYTQQQ 759
>gi|301096904|ref|XP_002897548.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107008|gb|EEY65060.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 681
Score = 226 bits (576), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 206/743 (27%), Positives = 342/743 (46%), Gaps = 100/743 (13%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEGWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTTAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAK 1605
+ LD + P ++E ++ F+++ E L
Sbjct: 393 LRRQARQLDEFHP-----------------DYESSLLGMLSS--GFISEFGELLP----- 428
Query: 1606 DVVTIKNESLKIGEDPDCAETLSDLDKE---ESFSQLPKDSLLDFQKKITLPKHENQDNS 1662
++++L+ E A +++L+ + E+F P + K + +S
Sbjct: 429 -----RDDALRFSEQLKTA--MNELNAQYQLENFPPTPSEQ-----------KSSMEADS 470
Query: 1663 SSSFFG-NREAYKQLLEIEKEDELFDQVLQA------RSLAMETIRASRQQFVLVASLID 1715
S F R+ L +E D ++A R + + RQ ++ ASL+D
Sbjct: 471 VSGFLTVQRKIDTTALLLE--DSALPAAMRADFDAARRGATLNARQRPRQPLIMCASLVD 528
Query: 1716 RIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHF 1772
++PNLAGLARTCE+F A L + + + D F +S TA KW+P+ EV + ++
Sbjct: 529 KVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRA 588
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQL 1832
L R K EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ
Sbjct: 589 LVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQF 648
Query: 1833 GVVRSLNVHVSGAIALWEYTRQQ 1855
G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 649 GLVRSLNVHVSGALVLWEYTQQQ 671
>gi|301095544|ref|XP_002896872.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262108622|gb|EEY66674.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 681
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 208/737 (28%), Positives = 340/737 (46%), Gaps = 88/737 (11%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEGWTAY---NDSKAKPDT- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W E + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAEFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDA----YDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRY 1601
+ LD Y+ +L + F++ EL +P + L F E L+
Sbjct: 393 LRRQARQLDEFHPDYESSLLGMLSSGFISEFGEL----LPR---DDALRF----SEQLKT 441
Query: 1602 SMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN 1661
+M + + E+ P +E S ++ + L Q+KI
Sbjct: 442 AMNELYAQYQLENFP----PTPSEQKSSMEADSV------SGFLTVQRKI---------- 481
Query: 1662 SSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLA 1721
+++ A + + + L AR + RQ ++ ASL+D++PNLA
Sbjct: 482 DTTALLLEDSALPAAMRADFDAARRGATLNAR-------QRPRQPLIMCASLVDKVPNLA 534
Query: 1722 GLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLERKKH 1778
GLARTCE+F A L + + + D F +S TA KW+P+ EV + ++ L R K
Sbjct: 535 GLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKR 594
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ G+VRSL
Sbjct: 595 EGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSL 654
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NVHVSGA+ LWEYT+QQ
Sbjct: 655 NVHVSGALVLWEYTQQQ 671
>gi|427793915|gb|JAA62409.1| Putative methyltransferase tarbp1, partial [Rhipicephalus pulchellus]
Length = 804
Score = 224 bits (570), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 209/755 (27%), Positives = 351/755 (46%), Gaps = 100/755 (13%)
Query: 1115 SDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWH 1174
+D++ + + +E+LE A + S L +L++V L L + VD ++
Sbjct: 129 TDELCNRLITEAIEALETASQKSCLHILKAVSHALSLV------------KVVDADLLSK 176
Query: 1175 LVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGT 1234
+++ W SC + + I +V + F+ + + L ++ ++LE G
Sbjct: 177 CLKACWQ---SCKDLKKSDI--FRPAVELFIGFAFQPALLQLYRGRLLSHYLNELLELGE 231
Query: 1235 KSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDE-----DFEAELAENYD 1289
P + L +W N ++ + + YG V + D EA + +
Sbjct: 232 VMPGVFCTLVMRLMDVWKGNVKLMDSQLDVMVKALTYGPVYRKDQRIVFDSEAFVTAQGE 291
Query: 1290 AKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKL 1349
A + LL +E + E+ A + +A L +D+ V +A + +AL
Sbjct: 292 ALSVNQLLK-------SEHQADVEVRA-LGIAFLIQLSSDEKTSVQTAAKLSEAL----- 338
Query: 1350 FLLGLLDFVVNDKDLA--RELYKKYSAIHRRKVRAWQ-MICILSRFVDNDIVGQVTHFLH 1406
V D ++ R+ Y S IHR K R WQ +C+L + + H H
Sbjct: 339 --------VRYDHEITSTRKRYFGNSTIHRLKNRVWQAQLCLLHLLNEEMFEKLLEHVFH 390
Query: 1407 ISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDM-RPQALSSYVFIAANVI 1465
+ + PS+R LE A++I L+ P L A +LVP + + R ++ S++ I ++
Sbjct: 391 ELVQDSQQPSIRCLLEWVAVSILLRTPRLRA-KLVPAMEQAGIERTGSVCSFLAIIVHLG 449
Query: 1466 LHASKAVQFR-HLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPL 1524
+ HL + LP ++P H + R + Q+ ++ L + + + G + +
Sbjct: 450 ACLDPETELESHLLEFLPSVLPWSMGQHFNARVYAQVALH--LASRW-SKEHGLNSVLEK 506
Query: 1525 EKSCFEDLKSYLAKNSDCTRLRASMSG-YLDAYDPNLSITPAVIFVNRDKEL---EFECV 1580
+ F LKS + + + + Y ++ +T IF + + + E +
Sbjct: 507 YAALFTCLKSTIQMGNWSRNVEKLLEDFYFKDFNAVDDLTLQTIFCDLPRLTGLTDREFI 566
Query: 1581 PTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLP 1640
P S+ E+VL + Y++ + + K G AE LDKE
Sbjct: 567 PLSVFEEVLTMGPEKLALPLYNLDDRLSSAKPSHWLEGTQ---AEPEVVLDKE------- 616
Query: 1641 KDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETI 1700
D+QKKIT +KQ ++ + ++D L + T
Sbjct: 617 -----DYQKKIT-------------------PWKQ--QLASCELMWD-------LNVPT- 642
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + ++VASLIDRIPNL GL RTCEVF + + L D+ FQ +SV+AEKW+
Sbjct: 643 KKTCGGLIVVASLIDRIPNLGGLCRTCEVFGVNEFVVGSLKYLEDRNFQGLSVSAEKWIT 702
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV VN +K +L K+ EG++++G+EQTA S PL ++ FP+KT+L+LG EKEG+PV++I
Sbjct: 703 ISEVKVNQLKEYLPGKRSEGYTLVGVEQTAGSKPLQEFNFPEKTLLLLGNEKEGLPVELI 762
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LD C+EIPQ GV+RSLNVHVSGAI +WEYT+Q
Sbjct: 763 QLLDVCVEIPQHGVIRSLNVHVSGAILVWEYTKQH 797
>gi|427793913|gb|JAA62408.1| Putative methyltransferase tarbp1, partial [Rhipicephalus pulchellus]
Length = 778
Score = 223 bits (568), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 209/755 (27%), Positives = 351/755 (46%), Gaps = 100/755 (13%)
Query: 1115 SDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWH 1174
+D++ + + +E+LE A + S L +L++V L L + VD ++
Sbjct: 103 TDELCNRLITEAIEALETASQKSCLHILKAVSHALSLV------------KVVDADLLSK 150
Query: 1175 LVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGT 1234
+++ W SC + + I +V + F+ + + L ++ ++LE G
Sbjct: 151 CLKACWQ---SCKDLKKSDI--FRPAVELFIGFAFQPALLQLYRGRLLSHYLNELLELGE 205
Query: 1235 KSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDE-----DFEAELAENYD 1289
P + L +W N ++ + + YG V + D EA + +
Sbjct: 206 VMPGVFCTLVMRLMDVWKGNVKLMDSQLDVMVKALTYGPVYRKDQRIVFDSEAFVTAQGE 265
Query: 1290 AKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKL 1349
A + LL +E + E+ A + +A L +D+ V +A + +AL
Sbjct: 266 ALSVNQLLK-------SEHQADVEVRA-LGIAFLIQLSSDEKTSVQTAAKLSEAL----- 312
Query: 1350 FLLGLLDFVVNDKDLA--RELYKKYSAIHRRKVRAWQ-MICILSRFVDNDIVGQVTHFLH 1406
V D ++ R+ Y S IHR K R WQ +C+L + + H H
Sbjct: 313 --------VRYDHEITSTRKRYFGNSTIHRLKNRVWQAQLCLLHLLNEEMFEKLLEHVFH 364
Query: 1407 ISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDM-RPQALSSYVFIAANVI 1465
+ + PS+R LE A++I L+ P L A +LVP + + R ++ S++ I ++
Sbjct: 365 ELVQDSQQPSIRCLLEWVAVSILLRTPRLRA-KLVPAMEQAGIERTGSVCSFLAIIVHLG 423
Query: 1466 LHASKAVQFR-HLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPL 1524
+ HL + LP ++P H + R + Q+ ++ L + + + G + +
Sbjct: 424 ACLDPETELESHLLEFLPSVLPWSMGQHFNARVYAQVALH--LASRW-SKEHGLNSVLEK 480
Query: 1525 EKSCFEDLKSYLAKNSDCTRLRASMSG-YLDAYDPNLSITPAVIFVNRDKEL---EFECV 1580
+ F LKS + + + + Y ++ +T IF + + + E +
Sbjct: 481 YAALFTCLKSTIQMGNWSRNVEKLLEDFYFKDFNAVDDLTLQTIFCDLPRLTGLTDREFI 540
Query: 1581 PTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLP 1640
P S+ E+VL + Y++ + + K G AE LDKE
Sbjct: 541 PLSVFEEVLTMGPEKLALPLYNLDDRLSSAKPSHWLEGTQ---AEPEVVLDKE------- 590
Query: 1641 KDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETI 1700
D+QKKIT +KQ ++ + ++D L + T
Sbjct: 591 -----DYQKKIT-------------------PWKQ--QLASCELMWD-------LNVPT- 616
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + ++VASLIDRIPNL GL RTCEVF + + L D+ FQ +SV+AEKW+
Sbjct: 617 KKTCGGLIVVASLIDRIPNLGGLCRTCEVFGVNEFVVGSLKYLEDRNFQGLSVSAEKWIT 676
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV VN +K +L K+ EG++++G+EQTA S PL ++ FP+KT+L+LG EKEG+PV++I
Sbjct: 677 ISEVKVNQLKEYLPGKRSEGYTLVGVEQTAGSKPLHEFNFPEKTLLLLGNEKEGLPVELI 736
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LD C+EIPQ GV+RSLNVHVSGAI +WEYT+Q
Sbjct: 737 QLLDVCVEIPQHGVIRSLNVHVSGAILVWEYTKQH 771
>gi|301096900|ref|XP_002897546.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107006|gb|EEY65058.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 681
Score = 223 bits (567), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 207/737 (28%), Positives = 339/737 (45%), Gaps = 88/737 (11%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEGWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +C +S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCFVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDA----YDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRY 1601
+ LD Y+ +L + F++ EL +P + L F E L+
Sbjct: 393 LRRQARQLDEFHPDYESSLLGMLSSGFISEFGEL----LPR---DDALRF----SEQLKT 441
Query: 1602 SMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN 1661
+M + + E+ P +E S ++ + L Q+KI
Sbjct: 442 AMNELYAQYQLENFP----PPPSEQKSSMETDSV------SGFLTVQRKI---------- 481
Query: 1662 SSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLA 1721
+++ A + + + L AR + RQ ++ ASL+D++PNLA
Sbjct: 482 DTTALLLEDSALPAAMRADFDAARRGATLNAR-------QRPRQPLIMCASLVDKVPNLA 534
Query: 1722 GLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLERKKH 1778
GLARTCE+F A L + + + D F +S TA KW+P+ EV + ++ L R K
Sbjct: 535 GLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKR 594
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ G+VRSL
Sbjct: 595 EGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSL 654
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NVHVSGA+ LWEYT+QQ
Sbjct: 655 NVHVSGALVLWEYTQQQ 671
>gi|397640921|gb|EJK74388.1| hypothetical protein THAOC_03935, partial [Thalassiosira oceanica]
Length = 931
Score = 222 bits (565), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 251/492 (51%), Gaps = 52/492 (10%)
Query: 1376 HRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSL 1435
+ R R+WQ +C+LSRFV DI QV +L N +R ++E F I P +
Sbjct: 469 YARITRSWQALCLLSRFVTEDIAQQVADKAFSALSNNLHGEIRYFMEVFLIQSTRIHPDV 528
Query: 1436 VAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDL-----LPPIVPLLTS 1490
+L+ ++ + Q +SS + I N+ + FR +D+ L +P L+S
Sbjct: 529 FGTRLIEDIQKPSLTLQQVSSLLIIGGNLTIGRYSCDFFRSSKDVRMKGFLVGALPWLSS 588
Query: 1491 HHHSLRGFTQLLVYQVLCKLFPT---LDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRA 1547
R QLL + ++ ++ LD ++ ++S + ++L +NSD +RLR
Sbjct: 589 TQGFSRAIAQLLCHSLIPQVVDVSVELDRDEGNQLK-DESVLRSVYTFLEENSDMSRLRK 647
Query: 1548 SMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDV 1607
+ YD + T + + E E P ++ + L + ++ A
Sbjct: 648 KQEDFFQTYDVDSVTTLGGLLSIPVGDGE-EANPEHKIDAIKECLAETYDEAHVEDAP-- 704
Query: 1608 VTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFF 1667
V + E L I + DC + L + + E + L++FQ+KI
Sbjct: 705 VWKQMEDLLI--NADCNQALGEEENEGIEDEA---QLVNFQRKI---------------- 743
Query: 1668 GNREAYKQLLEIEKEDELFDQVLQARSLAMETIRAS----RQQFVLVASLIDRIPNLAGL 1723
L I+ D L RS++ + + + +Q+ V+ A+L+D++PNLAGL
Sbjct: 744 ---------LPIDALD------LALRSISEQHLHNAAGKQKQKLVVCATLVDKVPNLAGL 788
Query: 1724 ARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSV 1783
ARTCE+F AS L + + I F+ IS +A+ W+ + EV + +L +KK EG+S+
Sbjct: 789 ARTCEIFSASTLVMPNVQIRKQDDFKSISASADGWIDLEEVKEGDLLGWLHQKKSEGYSI 848
Query: 1784 LGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVS 1843
+GLEQTA+S L + F +KTVL+LG+EKEGIP++ + +D CIEIPQLG++RSLNVHVS
Sbjct: 849 VGLEQTASSKCLTRMKFSEKTVLLLGKEKEGIPIEFLSAVDQCIEIPQLGIIRSLNVHVS 908
Query: 1844 GAIALWEYTRQQ 1855
GAI +WEYT+QQ
Sbjct: 909 GAITVWEYTKQQ 920
>gi|301096906|ref|XP_002897549.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107009|gb|EEY65061.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 705
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 296/640 (46%), Gaps = 80/640 (12%)
Query: 1237 PRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSL 1296
P + A L W +P ++ EL L LY DE + +LA + A +
Sbjct: 115 PNVVFHLACRLCQTWRAHPVSALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GF 171
Query: 1297 LAKSPVPELTEAFINTELYARVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLL 1355
SP+ A I T R V+ S + D + S+ + Q D+ LL L
Sbjct: 172 QGYSPLDGNQTAAITTHAKDRFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL- 230
Query: 1356 DFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRN 1412
++ E K++ S +K+R+WQ +CI+S V + ++ L +
Sbjct: 231 -------NVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVP 283
Query: 1413 NLPSVRQYLETFAITIYLKFPS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKA 1471
LPSVR Y+E F + + KFP+ + + L+P+L D ++ PQ +S + ++A ++
Sbjct: 284 QLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTK 340
Query: 1472 VQFRHLE----DLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLE 1525
+ L+ +LL ++P L + H G+T++L +L K+ P S K
Sbjct: 341 LDDNSLDVDCGELLETMLPWLNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPG 396
Query: 1526 KSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLM 1585
E YL+ N +C R+ + LD
Sbjct: 397 LRFLEGTARYLSNNKECKRMLRRQARQLD------------------------------- 425
Query: 1586 EQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLL 1645
F D L ++ ++ E L + C+E L E ++Q L
Sbjct: 426 ----EFHPDYESSLLGMLSSGFISEFGELLPRDDALRCSEQLKTA-MNELYAQY---QLE 477
Query: 1646 DFQKKITLPKHENQDNSSSSFFG-NREAYKQLLEIEKEDELFDQVLQA------RSLAME 1698
+F + K + +S S F R+ L +E D ++A R +
Sbjct: 478 NFPPTPSEQKSSMEADSVSGFLTVQRKIDTTALLLE--DSALPAAMRADFDAARRGATLN 535
Query: 1699 TIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEK 1757
+ RQ ++ ASL+D++PNLAGLARTCE+F A L + + + D F +S TA K
Sbjct: 536 ARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHK 595
Query: 1758 WVPIVEVPV--NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
W+P+ EV + ++ L R K EG++++ +EQTA+S+ L Y P+K VLVLGREKEGI
Sbjct: 596 WMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGI 655
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
PV+++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 656 PVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 695
>gi|301096896|ref|XP_002897544.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107004|gb|EEY65056.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 681
Score = 220 bits (561), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 207/737 (28%), Positives = 339/737 (45%), Gaps = 88/737 (11%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEGWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDA----YDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRY 1601
+ LD Y+ +L + F++ EL +P + L F E L+
Sbjct: 393 LRRQARQLDEFHPDYESSLLGMLSSGFISEFGEL----LPR---DDALRF----SEQLKT 441
Query: 1602 SMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN 1661
+M + + E+ P +E S ++ + L Q+KI
Sbjct: 442 AMNELYAQYQLENFP----PPPSEQKSSMETDSV------SGFLTVQRKI---------- 481
Query: 1662 SSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLA 1721
+++ A + + + L AR + RQ ++ ASL+D++PNLA
Sbjct: 482 DTTALLLEDSALPAAMRADFDAARRGATLNAR-------QRPRQPLIMCASLVDKVPNLA 534
Query: 1722 GLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLERKKH 1778
GLARTCE+F A L + + + D F +S TA KW+P+ EV + ++ L R K
Sbjct: 535 GLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKR 594
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ +VRSL
Sbjct: 595 EGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFELVRSL 654
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NVHVSGA+ LWEYT+QQ
Sbjct: 655 NVHVSGALVLWEYTQQQ 671
>gi|301096892|ref|XP_002897542.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107002|gb|EEY65054.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 681
Score = 218 bits (554), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 206/737 (27%), Positives = 339/737 (45%), Gaps = 88/737 (11%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEVWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PSLVAEQL-VPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + +P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVSLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLEIMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDA----YDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRY 1601
+ LD Y+ +L + F++ EL +P + L F E L+
Sbjct: 393 LRRQARQLDEFHPDYESSLLGMLSSGFISEFGEL----LPR---DDALRF----SEQLKT 441
Query: 1602 SMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN 1661
+M + + E+ P +E S ++ + +L Q+KI
Sbjct: 442 AMNELYAQYQLENFP----PTPSEQKSSMETDSV------SGILTVQRKI---------- 481
Query: 1662 SSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLA 1721
+++ A + + + L AR + RQ ++ ASL+D++PNLA
Sbjct: 482 DTTALLLVDSALPAAMRADFDAARRGATLNAR-------QRPRQPLIMCASLVDKVPNLA 534
Query: 1722 GLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV--NSIKHFLERKKH 1778
GLARTCE+F A L + + + D F +S TA KW+P+ EV + ++ L R K
Sbjct: 535 GLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRPQGDDLRRALVRWKR 594
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
E ++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++D C+EIPQ G+VRSL
Sbjct: 595 EDYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSL 654
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NVHVSGA+ LWEYT+QQ
Sbjct: 655 NVHVSGALVLWEYTQQQ 671
>gi|328865936|gb|EGG14322.1| tRNA/rRNA methyltransferase SpoU family protein [Dictyostelium
fasciculatum]
Length = 1689
Score = 211 bits (538), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 261/529 (49%), Gaps = 70/529 (13%)
Query: 1363 DLARELYKKYSAIHRRKVRAWQMICILSR----FVDNDIVGQVTHFLHISLYRNNLPSVR 1418
+L Y + S ++ K + W+ +C L+ F D + +V + L N P+VR
Sbjct: 1177 ELGHREYSQQSRTNKMKCKLWRTLCSLTHVIGVFDDTEHTKRVHELMWKILEIKNHPNVR 1236
Query: 1419 QYLETFAITIYLKFPS------LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAV 1472
++ F I + + S L+ L + DY M +S V I+ + + + +
Sbjct: 1237 YLIQLFIINVMVLSQSTQTSVDLLINHLANVNTDYQMS----ASVVIISTSYLYYLLR-- 1290
Query: 1473 QFRH-------------LEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCK----LFPTLD 1515
QF + + L IVP T HH++R QL ++ +L + L TL
Sbjct: 1291 QFNNNGEKKDNPIDQVLITKLFKSIVPWATDFHHAVRTCAQLAIHTILSRYPNPLLSTLS 1350
Query: 1516 FGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIF-VNRDKE 1574
SQ + + +YL ++ RLR S ++ DP + + IF N++
Sbjct: 1351 GEDSQ-------IIQSIYNYLDNSNLHKRLREKQSLFIQNDDPLKNALASNIFSTNKNTN 1403
Query: 1575 LEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKE- 1633
L V ++ +D N ED + + LS +D+
Sbjct: 1404 L-------------------VVDNDDDENNQDDNNNNNNDGDQEEDAELTQGLSAIDESV 1444
Query: 1634 --ESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYK-----QLLEIEKEDELF 1686
S + K + DFQ + NQ +SS++ G E ++ +L+ IE +
Sbjct: 1445 VPMSLLDIAKRVIKDFQSSFQ-NRGSNQQSSSAAAGGEGEDFQKRIIPELMSIEDNSNII 1503
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
+ + RQ+ ++VA+ ++ PN+AGL RTCE+F + +AI + +L+D
Sbjct: 1504 GGENNNNNTVNTN-KNQRQEMIVVATFVENTPNIAGLIRTCEIFNVTEVAIPNLKLLNDP 1562
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
QFQ +SV+A+KWVPIV+V +++ +L RKK EG++++G+EQT+ S L ++FP K +L
Sbjct: 1563 QFQRVSVSADKWVPIVQVARTNLQAYLIRKKEEGYAIIGVEQTSQSKSLSTFVFPTKCLL 1622
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LG+E+ GIP D ++++D C+EIPQ G++RSLNVHVSG+I LWEY++QQ
Sbjct: 1623 LLGQEQNGIPSDFLNLVDYCVEIPQFGIIRSLNVHVSGSIVLWEYSQQQ 1671
Score = 48.5 bits (114), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 68/185 (36%), Gaps = 52/185 (28%)
Query: 353 FDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTA 412
F+I A FW + LVD + + RKQ+LHILKA L
Sbjct: 304 FNILAEESFWNVVVVSLVDSDNVPRKQALHILKAAL------------------------ 339
Query: 413 RGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWN 472
SL V + +D QW FI L+E E +HL + W
Sbjct: 340 ---------------SLPVQRW---SDYLPPWDNTQWNIFISLFECFNETKSHLFKPVWA 381
Query: 473 HQITLLLQFSLPHDNLPGSTGRAHQNWIKP--SGEIFDWLSVLWERGFCHGNPQVRYMIM 530
+LL Q P + + + I P S W VL+ RGF H NP +R ++
Sbjct: 382 KLPSLLPQ--------PQNNNNNNNHVIDPTKSNSQLYWCDVLFRRGFTHINPNIRRRVV 433
Query: 531 QSFLG 535
L
Sbjct: 434 VDILA 438
>gi|403334822|gb|EJY66584.1| hypothetical protein OXYTRI_13129 [Oxytricha trifallax]
Length = 1724
Score = 211 bits (538), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 167/558 (29%), Positives = 258/558 (46%), Gaps = 118/558 (21%)
Query: 1342 DALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDN------ 1395
D +D+ + ++ LLD + ++ YS HR KVRAWQ I +L F+D
Sbjct: 1231 DFIDAMENLIIKLLDLNFVKAYIHADM--PYSEKHRVKVRAWQTIIVLMEFLDPSLYTTQ 1288
Query: 1396 -----------DIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQ--LVP 1442
DI+ + + N+L SVRQ+LE AI +P L + +
Sbjct: 1289 FRQMRVQQSGIDIIQEFNERFWKVVGMNHLSSVRQFLEIVAIKFTKMYPELSIQNPLFIK 1348
Query: 1443 ILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLL 1502
L D +++ Q SS++ IA ++
Sbjct: 1349 TLLDPNIKAQVASSFLVIAGYIL------------------------------------- 1371
Query: 1503 VYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSI 1562
T + ++ L+++ FE L +L NS R A Y +PN +
Sbjct: 1372 ----------TQPLNVANEIQLKRTIFEQLAGFLTSNSAHARCVAQYFIYELQSNPNQAY 1421
Query: 1563 TPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPD 1622
+P +M ++NFL + R D++ M+K+ V IK +
Sbjct: 1422 RA--------------FIPEGMMP-LVNFLINNR-DVKKLMSKEEVEIKRIEQVVENLKG 1465
Query: 1623 CAETLS---DLDKE---ESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQL 1676
LS D + E +F + +D L D + + QD + +K
Sbjct: 1466 VQIVLSTQIDFNGEFLSTTFVERIRDVLSD-----GISEIRRQDQQP---IDREDLWKME 1517
Query: 1677 LEIEKEDELFDQVLQARS---------------LAMETIRAS-----RQQFVLVASLIDR 1716
L+I K++ F +L S L E+++ + R + ++ A+LID+
Sbjct: 1518 LQIRKQNGQFQPILNEESSQNYQRKILPWENFELDYESLKKNFDNRKRNEIIMCAALIDK 1577
Query: 1717 IPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERK 1776
+PNLAGLART E+ AS L I + N+ +F+ +SVT+EKW+PIVEV + +LE +
Sbjct: 1578 VPNLAGLARTSEIMNASCLVINNKNVCDLDEFKGVSVTSEKWLPIVEVKEKDLYEYLEFQ 1637
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K G+ +LGLEQTA+S L +Y FP K +L+LG+EKEGIP +++LD CIEIPQ G++R
Sbjct: 1638 KTNGYVILGLEQTADSKMLHEYKFPSKCILLLGKEKEGIPQKYLNVLDHCIEIPQFGIIR 1697
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNVHVSGA+ LWEYT+Q
Sbjct: 1698 SLNVHVSGALCLWEYTKQ 1715
>gi|330801499|ref|XP_003288764.1| hypothetical protein DICPUDRAFT_153035 [Dictyostelium purpureum]
gi|325081198|gb|EGC34723.1| hypothetical protein DICPUDRAFT_153035 [Dictyostelium purpureum]
Length = 1628
Score = 209 bits (531), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 127/158 (80%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
E + SRQ +LVAS +D+IPNLAGL RT E+F L ++D IL+D FQ I+VTAEK
Sbjct: 1468 EIMTKSRQSVILVASFVDKIPNLAGLVRTSEIFNIECLVVSDMKILNDTAFQQITVTAEK 1527
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
W+P+ EVP S+K +L KK +G+S+LG+EQT++S+ L+++ FP+K+VLVLG+EKEGIP
Sbjct: 1528 WLPMEEVPEESLKQYLLGKKSQGYSLLGIEQTSSSVQLNKFDFPEKSVLVLGKEKEGIPT 1587
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I++LD CIEIPQLGV+RSLNVHVSG+I +WEYT+Q+
Sbjct: 1588 EFINLLDKCIEIPQLGVIRSLNVHVSGSILMWEYTKQK 1625
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 206/545 (37%), Gaps = 113/545 (20%)
Query: 361 FWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDL 420
FW+ I GLVD E L RK+S ++LK + I N+ +S DM GK T+
Sbjct: 306 FWKSIISGLVDMEPLNRKRSNYLLKKSISISISNENNS--EDM---GK------WTQYFE 354
Query: 421 WAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQ 480
W + + L Q+ W F L+ E L++++ H +E W L++
Sbjct: 355 WNKENSSKL----------------QKLWNTFFLINESLDDFTIHTIEPVWKELDQLVVS 398
Query: 481 FSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQV-RYMIMQSFLGIEWK 539
S G FDWL++L++RG H NP V + +++ +
Sbjct: 399 SSSN----------------SSFGLHFDWLNILFKRGLQHMNPAVIKILVLDVLYAKHYI 442
Query: 540 SYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAAS--FLHQYASFLDT 597
Y +P F+ + ++ P+ +K T+G +I A F Y S +T
Sbjct: 443 PY------LPLDFVTDNMIHLISTPLIYKG-STEG-----SIHAAIQHFFTVYYESLKET 490
Query: 598 RKQIAFLSNLASVAKQQSFGRVGLMALAECIASAACGVAAHIENKAECCGDAFPEKVPEE 657
+I N+ ++ K F R ++ L + I E + E+VP
Sbjct: 491 EMKIKLFRNIITILKNNHFHRDLVINLIKFI---------------EVITNKHKEQVP-V 534
Query: 658 CSPENFPCNDKSDLLDFLRFVIESSKQHFNPNYRLRGYSFWQFKLWFPVCEKVLEAAASL 717
+ E FP + E S + + N R R Y K + + + S
Sbjct: 535 VNNEFFPI---------FNTLFELSIKRLHSNGRNRLY-----KSVIKSLQYITDEQLSF 580
Query: 718 MCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANNCKSRMLVLKSLN 777
++ I HF S + WL+G S Q + S M +LK+ +
Sbjct: 581 DNMSKIIFSIPFHFHS---------NPQYNQLISNWLNGNSGQGANKTFNSIMEILKNHH 631
Query: 778 DFPISFTSHPSLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQDLAPVLKFIQNGGI 837
S P+ SN D + + +S + AR+ +KDEQ + V+K I +
Sbjct: 632 ----QQQSIPNTSN----IDKDFIVKLKSDSFISARI-ISYLKDEQ-FSGVIKQILDSTK 681
Query: 838 NICKQSNHVRCISMKFLIL------TLNFLQEIQIMQERYSECGIRIRTKSEIDSLKTVD 891
+ + +N F+ L +N +IQI+ + +E +S K++
Sbjct: 682 QLIENNNTNSVGFFYFITLLGSILSIINLPNQIQILNQLINEIFSNTFMNYLGESFKSIP 741
Query: 892 QFSYA 896
YA
Sbjct: 742 SIDYA 746
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 165/409 (40%), Gaps = 41/409 (10%)
Query: 1089 KWLCLESLLSLPYCGLENGANCSYFFSDDVVRYIFNDLVESLENAGEGSLLPMLRSVRLT 1148
KW + +LL+ +++ + S +++ +Y+ +ESL + P++ S+ +
Sbjct: 869 KWYLIRNLLTCLLHLVKSHSTESKVLNENSKKYL-EIAIESLGGSNFYCSQPIIHSLTIL 927
Query: 1149 LDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFS 1208
L L G++ D ++ + +W + C + I + + ++ S
Sbjct: 928 LPL------GAIDKKTNTFDQELFERALSYTWTSSVDCG--ILNYIGSFVQLAFQHNTLS 979
Query: 1209 EEEMHMMENTPG------PLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYI 1262
EN G LK + K+LE P L + T +W P I YI
Sbjct: 980 VHVTQEQENDLGLFNHHTVLKEYFYKLLEYCNVVPGIYNLLVMKSTMIWREYPEIAIQYI 1039
Query: 1263 KELKLLTLYGSVAF-------DEDFEAELAE------NYDAKTEVSLLAKSPVPELTEAF 1309
E+ +YG + DE+ E E +Y + +S E F
Sbjct: 1040 DEIYEALIYGPIRVASNDLHQDEN-EISFYEPLVGIPSYVFNLHQDSIVESQQDEEKFGF 1098
Query: 1310 INT---ELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLAR 1366
+ + R + + + + + ++ S+ + ++ K F+ L+ D +
Sbjct: 1099 GYVPYRDSFGRAATTIFINTMGELSQQKPSSTTDEHKINLYKKFI-NLITIKFLDSNFYE 1157
Query: 1367 ELYKKYSAI-----HRRKVRAWQMICILSRFV---DNDIVGQVTHFLHISLYRNNLPSVR 1418
E KK I HR K+R WQ +C+LS+F+ D ++ Q+ + + +LPSVR
Sbjct: 1158 EFLKKKEYILNTFTHRLKIRIWQTLCVLSKFINTEDKEMSNQIGDSIVKVFFIFHLPSVR 1217
Query: 1419 QYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILH 1467
+Y+ F + + +V L+ + + ++R LSS AA V+++
Sbjct: 1218 KYINIFLVNLIKSNHEIVESHLLKLFDNVNLRGDILSSITVTAAYVLIN 1266
>gi|66808737|ref|XP_638091.1| hypothetical protein DDB_G0285499 [Dictyostelium discoideum AX4]
gi|60466535|gb|EAL64587.1| hypothetical protein DDB_G0285499 [Dictyostelium discoideum AX4]
Length = 1677
Score = 207 bits (528), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 141/196 (71%), Gaps = 13/196 (6%)
Query: 1660 DNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPN 1719
DN+ +S+ + L++E DEL ++ +RQ ++VAS ID+IPN
Sbjct: 1492 DNNPTSYQKKILPWSNDLDLETRDEL-------------VVKKARQSIIIVASFIDKIPN 1538
Query: 1720 LAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHE 1779
LAGLARTCE+F L ++D I +K+FQ I+VTAEKW+P+ EV N +K +L KK +
Sbjct: 1539 LAGLARTCEIFNIECLVVSDLKIRDNKEFQNITVTAEKWLPMEEVAENDLKQYLLLKKSQ 1598
Query: 1780 GFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLN 1839
G+S+LG+EQT++S+ L+++ FP+K+VLVLG+EKEGIP + I++LD CIEIPQLG++RSLN
Sbjct: 1599 GYSLLGVEQTSSSVLLNKFEFPQKSVLVLGKEKEGIPTEFINLLDKCIEIPQLGIIRSLN 1658
Query: 1840 VHVSGAIALWEYTRQQ 1855
VHVSG++ +W+Y RQQ
Sbjct: 1659 VHVSGSLMIWDYFRQQ 1674
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 1361 DKD-LARELYKKYSAIHRRKVRAWQMICILSRFVD-------NDIVGQVTHFLHISLYRN 1412
DK+ L ++ Y + IHR KVR WQ +CILS+F+ N+I + H+
Sbjct: 1192 DKEFLKKKEYILNTPIHRLKVRIWQSLCILSKFIQPNSNEQMNEIGSAIVKIFHLF---- 1247
Query: 1413 NLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAV 1472
NLPS+R+Y+ F + + ++ L+ +L + ++R LSS V A ++L+
Sbjct: 1248 NLPSIRKYVNIFLVNFMKRHHEIIEIHLIQLLDNLNVRGDILSSIVVTAGYILLNIENNN 1307
Query: 1473 QFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQV 1506
Q + + I+ L TS H ++ ++ Q+
Sbjct: 1308 QLY--QKVFNRILSLTTSGHQVVKTIASSIIVQI 1339
Score = 53.9 bits (128), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 48/242 (19%)
Query: 361 FWEEIKRGLVD-EEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRD 419
FW+ I GL D + L RK+S ++LK ++I E + ++ + G N +K
Sbjct: 302 FWQSIINGLNDINDSLNRKRSSYLLKKSIKISIEKEN-----EISTWGDN-----WSKYF 351
Query: 420 LWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLL 479
W+ ++++ L Q+ W F L+YE L++++ HL++ W +L+
Sbjct: 352 KWSKEDSEKL----------------QKLWNTFFLIYESLDDFTIHLIQPVWKEIDSLV- 394
Query: 480 QFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQV-RYMIMQSFLGIEW 538
+ S+ + G F+W+ +L++R H NP V + +I+ ++
Sbjct: 395 --------IGSSSSSPMSSPSSKEGLDFEWVEILFKRCLNHQNPAVIKVLIIDVLNSKQY 446
Query: 539 KSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTR 598
Y +P F+ G ++ +++ + KGV S +F Y L T
Sbjct: 447 IPY------LPIEFISGTLIQSISNAALY-----KGVTESTIHVATINFFTNYYQSLSTI 495
Query: 599 KQ 600
K+
Sbjct: 496 KE 497
>gi|384485377|gb|EIE77557.1| hypothetical protein RO3G_02261 [Rhizopus delemar RA 99-880]
Length = 1516
Score = 204 bits (519), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 210/811 (25%), Positives = 356/811 (43%), Gaps = 115/811 (14%)
Query: 1068 INALLAAGVLARARRAILLNWKWLCLESLLSLPYCGLENGANCSYFFSDDVVRYIFNDLV 1127
I +L+ + R + AI +KW +E+++ N F D + ++ +
Sbjct: 791 IVSLIYGLQMKRTQEAIQERYKWELVETIVRYANIARNNNETKECF---DPIE-LYEVAI 846
Query: 1128 ESLENAGEGSLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCN 1187
+ LE+A E ++ S R L F S LV C + ++M + N
Sbjct: 847 DQLESASEMCGEAIISSFR-PLFAFPWEKSADLVGRCVDLAIELMKE----------NIN 895
Query: 1188 KRRVAP--IAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAAL 1245
+ + P I A ++++ + S E++ GP+K + VLE G P + A+
Sbjct: 896 QSKTFPLLIKAFINAIFQPELLSVPELN---RNDGPVKRALNMVLETGDLKPFIVAQASK 952
Query: 1246 HLTGLWLT-NPWI---IKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSP 1301
L W T P ++ Y E L ++G + ED + E A + L +
Sbjct: 953 LLHDYWATFTPEACQSMQQYASEFAKLAVFGPLRDREDQKLEAAIS---------LKLAE 1003
Query: 1302 VPELTEA-------FINTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGL 1354
V EL++A F + RV + L +L E S K F L
Sbjct: 1004 VEELSDAEGTAASIFNQNDYLVRVYMNNLLLRLDINNE-------------SHKAFANTL 1050
Query: 1355 LD--FVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRN 1412
LD F + D E + HR K+R I ++ D V L +
Sbjct: 1051 LDSFFQYMENDALFEYMYTSTVEHRLKLRISCSIILIIDLATEDKVDTYLETLFEITRKE 1110
Query: 1413 NLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAV 1472
+ S+R YLE + + +FP ++ L + + RP + S + ++ + ++
Sbjct: 1111 TVTSIRCYLEWAIVKLLSRFPDRLS-LYYKKLSNPEHRPNYVISLLTVSFTLGQCLPESS 1169
Query: 1473 QFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFED- 1531
+ +++ ++P L ++H ++R F+ +Q K +G LE + + D
Sbjct: 1170 LQGYFDEIFVRLLPWLITNHFTIRLFS-YCAWQHNWKYCTERGYGAL----LENNKYLDC 1224
Query: 1532 LKSYLAKNSDCTRLRASMSG--YLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVL 1589
+ +++ DC + + Y+ +DP IF R EF+ + Q++
Sbjct: 1225 IGNFMKTYIDCIKFFEKIKSQFYMSRFDPVQDFNIEFIF--RQMMTEFQKAFVRVNPQIV 1282
Query: 1590 N---FLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLD 1646
F N R+ L Y+ A I + P+ +T D+
Sbjct: 1283 ERCPFQNPARK-LIYTAADPTELIGVVEEQDENVPETVQTAEDV---------------- 1325
Query: 1647 FQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQ 1706
+QKKI +P ++ +LE + + ++L + R R
Sbjct: 1326 YQKKI-MP------------------WEMMLETDMD--------LTKNLVKKNRR--RND 1356
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+DR+PNLAGL RTCE+F AS L + I D F +SV++E+W+P++EV
Sbjct: 1357 LIVVASLVDRLPNLAGLCRTCEIFNASQLVVPTLKIKEDIGFTSVSVSSERWMPMIEVAE 1416
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
N + FL+ K+ EG+++ GLEQT S L Y FP+K VL+LG+E++G+P +++ MLD
Sbjct: 1417 NDVATFLQAKREEGYTICGLEQTTTSATLGDYAFPEKCVLLLGKERQGVPANLLQMLDVT 1476
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
IEIPQ G+ RSLNVHVSGAI ++EYT+Q ++
Sbjct: 1477 IEIPQYGITRSLNVHVSGAICIYEYTKQMQW 1507
>gi|293343446|ref|XP_002725485.1| PREDICTED: probable methyltransferase TARBP1-like [Rattus norvegicus]
Length = 1500
Score = 201 bits (510), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 162/521 (31%), Positives = 249/521 (47%), Gaps = 52/521 (9%)
Query: 1346 SGKLFLLGLLDFVVNDKDLA---RELYKKYSAIHRRKVRAWQMICIL-SRFVDNDIVGQV 1401
S KLFL L +++ + A R Y + S HR K R WQ + +L F N + G +
Sbjct: 1012 SHKLFLEDLAVKLLDKDESASRSRTRYHENSLQHRVKNRVWQTLLVLFPAFDQNFLHGII 1071
Query: 1402 THFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIA 1461
H + NN S++ ++E I I KFP E L + + + + +
Sbjct: 1072 DKVFHAG-FTNNQASIKYFIEWLIILILHKFP----EFLPKFWACFSYGEEKIKTSICTF 1126
Query: 1462 ANVILHASKAVQFRH-----LEDLLPPIVPLLTSHHHSLRGFTQLLVYQV--LCKLFPTL 1514
+V+ H VQ L+ L + SH+ S+R + + + + LCK
Sbjct: 1127 LSVLSHLDIIVQNIPEKKLVLKQALTVALQWCLSHNFSVRLYALVALKKAWHLCKALQFE 1186
Query: 1515 DFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE 1574
+ G + +E S + + A N+ R + + P + IF +
Sbjct: 1187 ECGAWTTV-IECSLSQAESMHGAGNARKNWQRIQDHFFFSTFHPLKDYSLETIFYTFPRL 1245
Query: 1575 LEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEE 1634
+E+ NF D+ ++ +T+ S D TL + D +
Sbjct: 1246 SGVTEEEWIALEKFANF-TDIPSNVGSQWYLSGITLGELSPGDWSQQDQGSTLGEADSQS 1304
Query: 1635 SFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARS 1694
++ D QKKI H D+ LE+E +D +A
Sbjct: 1305 EWA--------DVQKKIIPWGHSALDSD--------------LELEFQD-------RAAK 1335
Query: 1695 LAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVT 1754
L R ++VASLID+ NL GL RTCEVF A+ L + + D+QFQ +SV+
Sbjct: 1336 LGKSISR-----LIVVASLIDKPTNLGGLCRTCEVFGAAVLVVGSLQCVSDRQFQHLSVS 1390
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
AE+W+P+VEV + + +L++KK EG++V+G+EQTA S L QY FP+K++L+LG E+EG
Sbjct: 1391 AEQWLPLVEVRPSQLVDYLQQKKAEGYTVIGVEQTAQSSDLAQYRFPEKSLLLLGNEREG 1450
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
IPV++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1451 IPVNLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1491
>gi|440799465|gb|ELR20510.1| RNA methyltransferase [Acanthamoeba castellanii str. Neff]
Length = 372
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 131/177 (74%), Gaps = 10/177 (5%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E+E+ +QV+ R RQ+ ++VASL+D++PNLAGLARTCE+F AS LA+
Sbjct: 190 EQEEMAREQVMSKR----------RQELIVVASLVDKLPNLAGLARTCEIFGASCLALPS 239
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+ + FQ I+VT+EKW+P+VEV + +L +K+ EG+++LG+EQT+ S LD +
Sbjct: 240 LKVTREAVFQSIAVTSEKWLPLVEVGEAGLVAYLRQKRAEGYALLGVEQTSGSTLLDAFT 299
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
FP + +L+LGREK+GIP ++IH+LDACIEIPQLGV+RSLNVHVS +I +WEYTRQ R
Sbjct: 300 FPARCLLLLGREKQGIPPELIHLLDACIEIPQLGVIRSLNVHVSASIMVWEYTRQMR 356
>gi|281211833|gb|EFA85995.1| TAR RNA loop binding protein [Polysphondylium pallidum PN500]
Length = 1614
Score = 197 bits (500), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 120/152 (78%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
+RQQ ++VA+ +D+IPNLAGLART E+F L ++ + +D FQ ISV+AE+W+P+
Sbjct: 1457 TRQQLIIVATFVDKIPNLAGLARTSEIFNVESLVVSKKKVANDPMFQQISVSAERWLPMT 1516
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + ++ +L KK EG+++LG+EQT+ S L++Y FP+K VL+LG+EKEGIP + I++
Sbjct: 1517 EVEEHQLREYLLSKKQEGYTLLGVEQTSTSSQLNEYKFPEKAVLLLGKEKEGIPTEYINL 1576
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
LD CIEIPQLG++RSLNVHVSG+I +WEYT+Q
Sbjct: 1577 LDKCIEIPQLGIIRSLNVHVSGSILMWEYTKQ 1608
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 153/384 (39%), Gaps = 88/384 (22%)
Query: 253 MTERLLLQSVEHRSCAIAFLLPIILK-AFVSLCSSEISFHGHIYILSRKCFFKKIWKCCR 311
+T L+ +VE R I LLP +L+ + V+ C S +S
Sbjct: 275 LTPLLMSDNVEQRQSLIVTLLPSLLRCSSVAQCQSLVS-------------------TVM 315
Query: 312 TLFSLGTLE-RRDAFTVLSLYLSYSSYTEGSENSDRSDRGEEFDIRAVREFWEEIKRGLV 370
+F++ E + DAF +L+ Y ++ S D+ +FW + +G +
Sbjct: 316 KMFTIAEHEIKSDAFKILAR--QYDTFFSSSI----------VDLTYSPDFWRYLIQGFI 363
Query: 371 DEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRDLWAVKEAKSLG 430
D + L+RK+S ++LK ++ + + ++ ++ R ++ W+ +E++ L
Sbjct: 364 DADPLIRKRSNYLLKKTIK--------RSIDETQNTCVDAPNRCWSEYFRWSAEESEQL- 414
Query: 431 VGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQITLLLQFSLPHDNLPG 490
Q+QW+ F L+ E L+E++ HL+ W +L++ S H
Sbjct: 415 ---------------QKQWDTFFLINETLDEFNVHLIAPVWREIDSLIVHQSPLH----- 454
Query: 491 STGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIEWKSYENCAKSVPE 550
F WL +L++R H NP V I L I S + K +P
Sbjct: 455 ----------------FAWLDILFQRVMLHENPAV---IKAQVLEI-LNSTQYIPK-LPM 493
Query: 551 SFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFLDTRKQIAFLSNLASV 610
F+ G + + + + + +G+ R FL Y + L T Q FLS L +V
Sbjct: 494 EFIFGTLIRAITNTILY-----RGITEDRIHPSIQYFLETYYNSLSTDLQSVFLSKLLNV 548
Query: 611 AKQQSFGRVGLMALAECIASAACG 634
+ M++ I+ +
Sbjct: 549 ISSTEYFSAFTMSILSFISKSNTN 572
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 1222 LKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFD---E 1278
LK + + VL + L L + +W+ P I YYI E+ ++G + D E
Sbjct: 1028 LKKYFKLVLNLSESIMGLMNLLLLKCSPVWIEQPEISLYYIDEIYQSIIFGPIRKDDEWE 1087
Query: 1279 DFEAELAENYDAKTEVSLLA---------KSPVPEL---TEAFINTELYARVSVAVLFSK 1326
+ E + YD S ++ V E+ A +++ R VA K
Sbjct: 1088 NNEKTSTQFYDPMIGYSTFVLDMGIEATYENEVDEIRFGVGAIPLKDVFGRAVVATFIKK 1147
Query: 1327 LADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAI-----HRRKVR 1381
+A + + S K S L L + D +L +E KK + HR+++R
Sbjct: 1148 MATLSTVENSNK-------SKYLEFTNTLANHLIDINLTKEFTKKIEHLINTQPHRKRIR 1200
Query: 1382 AWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLV 1441
WQ++C+L+ ++ + ++ L ++ NLPS R+Y+ F I + +F SLV+ +
Sbjct: 1201 IWQILCLLAPYMVPTSMKEIGKKLTDIIFTYNLPSTRRYINIFTINLVTRFQSLVSSHFI 1260
Query: 1442 P 1442
P
Sbjct: 1261 P 1261
>gi|443717635|gb|ELU08602.1| hypothetical protein CAPTEDRAFT_220697 [Capitella teleta]
Length = 1512
Score = 196 bits (499), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 115/155 (74%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R R VLV SLID++PNL GL RT E+F S I++ D+ F+ +SVTAEKW+P
Sbjct: 1351 RVKRGGLVLVTSLIDKVPNLGGLCRTSEIFGVSEFVISNIGFTRDRGFESLSVTAEKWIP 1410
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EVP+ +K +LE + EG+++ G EQTA S+ L +Y FP+KTVL+LG EKEGIPV++I
Sbjct: 1411 ISEVPIARLKPYLESMRREGYTLAGAEQTAQSVSLTEYAFPEKTVLLLGNEKEGIPVELI 1470
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
MLD CIEIPQ G++RSLNVHVSGA+ +WEYTRQ
Sbjct: 1471 QMLDVCIEIPQQGLIRSLNVHVSGALLIWEYTRQH 1505
>gi|342186579|emb|CCC96066.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1716
Score = 196 bits (499), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 182/687 (26%), Positives = 323/687 (47%), Gaps = 77/687 (11%)
Query: 1194 IAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLT 1253
+A L L Y + +EEE+ +K + L + ++S RT +AA+ L+ L
Sbjct: 1077 MAVLAYDTLRYGLETEEEL---------VKSHIRGALMDDSQSDRTSYVAAVMLSAEVLR 1127
Query: 1254 NP---WIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFI 1310
NP W LK L L+ +V + E E+ E + E ++A+ P + E +
Sbjct: 1128 NPAANW------PRLKELLLHVAVLHNPSREEEMFEVLVSAMEPLIVAEWP-QTMREQYP 1180
Query: 1311 NTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
T V S + I C++ + + L LL++ + +++ E
Sbjct: 1181 PT---------VQLSLVGRSMAISAILWCCREKEEWARDVSLTLLEWSCSHTEVSHEPCM 1231
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDNDIVGQ--VTHFLHISLYRNNLPSVRQYLETFAITI 1428
S HR ++R WQ++C L +D+ + + + + L N+ SVR+ +E +A+ +
Sbjct: 1232 PNSKPHRSRMRLWQLLCSLVPMIDDPTLQRDLLQKVVTKCLTLTNMGSVRRLIELYALQL 1291
Query: 1429 YLKFPSLVAEQLVPI----LRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPI 1484
K P +L P+ + DY +RPQ L SYVF+ A+VIL + + + ++ L+ +
Sbjct: 1292 LQKQP-----ELYPVVDGAMADYTLRPQVLGSYVFLCAHVILQELRG-EVKKVDGLMEKL 1345
Query: 1485 VPLL----TSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFED-LKSYLAKN 1539
+ L TSH H LR ++C + L ++ S E+ + Y++
Sbjct: 1346 LYRLFQQSTSHQHLLR---------LVCHIGLNLIHEACNSKGIKFSANEERMLDYISNA 1396
Query: 1540 SDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVR 1596
+ + R L +D + TP +F + KE + +P + E+ + F+ R
Sbjct: 1397 PEHVKFRVQHVQQL-FFDIREASTPRWLFCTQRKEGNNILAVSLPAAAFER-MRFVG--R 1452
Query: 1597 EDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLP---KDSLL--DF-QKK 1650
E + A++ V + L+I +T L+ E F +P + +L D+
Sbjct: 1453 ELTCLTGAQNSVDM----LRIKSVIRRLDTHRLLEPFEEFPYIPHTERSALYCPDYTHDA 1508
Query: 1651 ITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLV 1710
+ L + D + S E ++ +L+++ L ++A RQ ++V
Sbjct: 1509 LALLVADPHDTAVSRAVSCSENIQRKATPWWSTQLYNE------LHPRVLKAERQSVIVV 1562
Query: 1711 ASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIK 1770
ASL+ N+AGL R EVF + +++ ++L F + +A W+P V +
Sbjct: 1563 ASLLQNPVNVAGLFRCGEVFAVERVVVSEPSVLEHPHFVAAARSANLWLPWTAVQTRMLS 1622
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+L + G++++G+EQTA S+ ++ Y FPKK V+VLG E GIP ++ +LD C+EIP
Sbjct: 1623 AYLLSMRQHGYALVGIEQTAGSVSIETYQFPKKCVIVLGAEGHGIPAHLLPLLDICVEIP 1682
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Q G++RSLNVHV+G+I ++EYTRQ R
Sbjct: 1683 QYGLIRSLNVHVTGSIVIYEYTRQHRL 1709
>gi|348575548|ref|XP_003473550.1| PREDICTED: probable methyltransferase TARBP1-like [Cavia porcellus]
Length = 1590
Score = 196 bits (499), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 251/536 (46%), Gaps = 82/536 (15%)
Query: 1346 SGKLFLLGLLDFVVNDKDL---ARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ + +++ DL R Y + S HR K R WQ + +L D + + +
Sbjct: 1103 SHKLFVEDIAVKLLDKDDLVSKTRTRYYENSLQHRVKNRIWQTLLVLFPSFDQNFLNGII 1162
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRD-YDMRPQALSSYVFIA 1461
+ + + NN S++ ++E I I KFP Q +P D + + L + +
Sbjct: 1163 DKIFHAGFTNNQASIKYFIEWIIILILHKFP-----QFLPKFWDCFSYGEEKLKTSICTF 1217
Query: 1462 ANVILHASKAVQFRHLEDLLPPIVPLLT-----------SHHHSLRGFTQLLVYQVLCKL 1510
+V+ H +Q +P PLL SH+ S+R + L+ + + +
Sbjct: 1218 LSVLSHLGIIIQN------IPDKAPLLKQALLIALQWCLSHNFSVRLYA-LVALKKVWDV 1270
Query: 1511 FPTLDFG--TSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIF 1568
+ L ++ +E+S + A N+ R + A+ P
Sbjct: 1271 YKALGVEECSTWTTVIERSLSQAESMQGAGNAKKNWQRIQEHFFFAAFHP---------- 1320
Query: 1569 VNRDKELEFECVPTSLMEQVLNFLNDVREDL-----RYSMAKDVVTIKNESLKIGEDPDC 1623
LE C+ T +L L+ V E+ +++ D+ + + P
Sbjct: 1321 ------LEDYCLETIFY--ILPRLSGVIEEEWIAVDKFASFTDIPCNRESQWYFCQTPLR 1372
Query: 1624 AETLSDLDKEESFSQLPKDS----LLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEI 1679
+ D +++ S + + D QKKI +HE D F +R A
Sbjct: 1373 ELSPGDWSQQDVGSNTSEAASHSEWADVQKKIIPWRHEGPDADLGLEFQDRAA------- 1425
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
+ S + ++VASLID+ NL GL RTCEVF A+ L +
Sbjct: 1426 -------------------RLGKSVSRLIVVASLIDKPTNLGGLCRTCEVFGAAALVLGS 1466
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+ DKQFQ +SV+AE+W+P+VEV + +L+ KK EG++++G+EQTA S L QY
Sbjct: 1467 LQCVSDKQFQHLSVSAEQWLPLVEVKPAQLIDYLQLKKAEGYTIIGVEQTARSSDLAQYR 1526
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++L+LG E+EGIP +++ LD C+EIPQ GV+RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1527 FPEKSLLLLGNEREGIPANLMQHLDVCVEIPQQGVIRSLNVHVSGALLIWEYTRQQ 1582
>gi|291240059|ref|XP_002739939.1| PREDICTED: TAR (HIV-1) RNA binding protein 1-like [Saccoglossus
kowalevskii]
Length = 1247
Score = 195 bits (496), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 254/526 (48%), Gaps = 94/526 (17%)
Query: 1361 DKDLA----RELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPS 1416
DK +A R+ Y+ S HR K R WQ + IL D D + SL ++ S
Sbjct: 780 DKSVAVTAMRKQYQLNSMQHRIKQRIWQTMLILQPAFDQDASEYMLTEAMKSLQTDSQLS 839
Query: 1417 VRQYLETF-AITIYLKFPSLVAEQLVPILRDYDMRPQ-----ALSSYVFIAANVILHASK 1470
++ +E F A+T+Y K+P + + + + R +L S + I VI K
Sbjct: 840 IKNLIEWFIALTLY-KYPQFL-HLIWDMFNNESQRKTVGVMTSLISIITILGPVI--KCK 895
Query: 1471 AVQFRHLEDLLPPIVPLLTSHHHSLRGFTQ-----LLVYQVLCKLFPTLDFGTSQKMPLE 1525
Q +L ++ ++ + + ++R + Q + Y KL LD + P
Sbjct: 896 QHQDSYLGQVITTMMSYTMAGNFTIRLYAQSALQKIWTYCDHMKLTHILD-----RYPGI 950
Query: 1526 KSCFEDLKSYLAKNSDCTRLRASMSG-YLD-AYDPNLSITPAVIFVNR-------DKEL- 1575
K+C ++L +S +L+ + G YL +DP + IF + D EL
Sbjct: 951 KTCV----NFLESSSHAGKLKERLLGNYLFFKFDPIQDYSIETIFHSLPYLCNVIDNELI 1006
Query: 1576 ---EFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDK 1632
F+ V + Q+ L + R +L+ S + KI D T D
Sbjct: 1007 SPESFQSVVSG--RQLSLPLFNARNELKTSQPG--------TWKIRGPMDYTITTGDTVD 1056
Query: 1633 EESFSQLPKDSLLDFQKKITLPKHE---NQDNSSSSFFGNREAYKQLLEIEKEDELFDQV 1689
++ S D QKKIT P E ++D SS+S NR+
Sbjct: 1057 DDLMSG-------DVQKKIT-PWSETLLDEDVSSASNLRNRK------------------ 1090
Query: 1690 LQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
R Q +LV SLID++PNL G+ RTCE+F L +A K FQ
Sbjct: 1091 --------------RGQLILVTSLIDKLPNLGGICRTCEIFGVGQLVLASLKYAEHKDFQ 1136
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+SVTAEKW+P+ EV +++K +L + EG++++G+EQTANS L QY F KT+L+LG
Sbjct: 1137 GLSVTAEKWIPLREVKASALKDYLLEVRKEGYTLIGVEQTANSHCLTQYQFTDKTLLLLG 1196
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E+EGIPV++I +LD C+EIPQLGV+RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1197 NEREGIPVELIQLLDMCVEIPQLGVIRSLNVHVSGALLVWEYTRQQ 1242
>gi|351694561|gb|EHA97479.1| Putative methyltransferase TARBP1 [Heterocephalus glaber]
Length = 1421
Score = 195 bits (495), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 261/529 (49%), Gaps = 55/529 (10%)
Query: 1346 SGKLFLLGLLDFVVNDKDL---ARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ + +++ +L R Y + S HR K R WQ + +L D + + +
Sbjct: 921 SHKLFIEDIAMKLLDKDELVSKTRTRYYENSLQHRVKNRIWQTLLVLFPSFDQNFLNGII 980
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRD-YDMRPQALSSYVFIA 1461
+ + + NN S++ ++E I I K P Q +P D + + L + +
Sbjct: 981 DKIFHAGFTNNQASIKYFIEWIIILILHKCP-----QFLPKFWDCFSYSEEKLKTSICTF 1035
Query: 1462 ANVILHASKAVQFRHLEDLLPPIVPLLT-----------SHHHSLRGFTQLLVYQV--LC 1508
+V+ H VQ +P PLL SH+ S+R + + + +V +C
Sbjct: 1036 LSVLSHLGIIVQN------IPDKTPLLKQALLIALQWCLSHNFSVRLYALVALKKVWDVC 1089
Query: 1509 KLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIF 1568
K ++ + +E+S + A N+ R + + P + +
Sbjct: 1090 KALGVEEYNAWTTV-IERSLSQAESMQGAGNAKKNWQRIQEHFFFATFHP---LEDYCLE 1145
Query: 1569 VNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLS 1628
V+ VP L VL F + I+ E + +G+ + A+ S
Sbjct: 1146 VSTPDTYTTHSVPIVL---VLPFPHSC-------------VIEEEWIAVGKFANFADIPS 1189
Query: 1629 DLDKEESFSQLPKDSLL--DFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELF 1686
+ + FS+ P L D+ ++ + + ++ S S + + K+++ +E
Sbjct: 1190 NTGSQWYFSRTPLSELSPGDWSQQ-DIGSNMSEAASQSEW---ADVQKKIIPWRQEGLDA 1245
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
D L+ + A + S + ++VASLI++ NL GL RTCEVF A+ L + + DK
Sbjct: 1246 DLGLEFQDRAAR-LGKSVSRLIVVASLINKPTNLGGLCRTCEVFGAAALVLGSLQCVGDK 1304
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
QFQ +SV+AE+W+P+VEV + +L+ KK EG++++G+EQTA S L QY FP+K++L
Sbjct: 1305 QFQHLSVSAEQWLPLVEVKPAQLIDYLQLKKTEGYTIIGVEQTARSSDLAQYCFPEKSLL 1364
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LG E+EGIP ++I LD C+EIPQ GV+RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1365 LLGNEREGIPANLIQHLDVCVEIPQQGVIRSLNVHVSGALLIWEYTRQQ 1413
>gi|209880764|ref|XP_002141821.1| RNA methyltransferase, TrmH family protein [Cryptosporidium muris
RN66]
gi|209557427|gb|EEA07472.1| RNA methyltransferase, TrmH family protein [Cryptosporidium muris
RN66]
Length = 1629
Score = 194 bits (494), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/535 (29%), Positives = 257/535 (48%), Gaps = 94/535 (17%)
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLH--ISLYRNNL-----PSVRQYLETFA 1425
S +R +R WQ +C LS + V Q+ H++ +S Y +L P +RQY+E F
Sbjct: 1135 SVQYRILLRGWQTLCCLSDILK---VSQI-HWISSVVSFYMRHLKIPYSPEIRQYIELFG 1190
Query: 1426 ITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHAS--KAV------QFRHL 1477
+ +P L E L+ L Q S++ I++ I++ + K++ + H+
Sbjct: 1191 CKLLCIYPKLCLEPLLSNLASECNNVQVCHSHLVISSFYIINYTYNKSIIQDNIHEKMHI 1250
Query: 1478 EDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTS-----QKMPLEKSCFED- 1531
E L + L S+ + + L K+ +D + +++ LE++
Sbjct: 1251 EKLSKQLFATLLSYSICNSALLRTIALYTLEKVASQIDNNDNICSAREQIQLEQTSNNSF 1310
Query: 1532 ------------LKSYLAKNSDCTRLRASMSGYLDAYDPNLS-----ITPAVIFVN---- 1570
+ S+L + D R+ S++ D + P I P+ F+
Sbjct: 1311 VYNILNETLGSAILSHLNNSKDLKRMLKSVTQVWDHWKPLTQCSLDYILPSKNFLKFSDL 1370
Query: 1571 RDKELEFECVPTSLMEQVLNFLN-DVRED--LRYSMAKDVVTIKNESLKIGEDPDCAETL 1627
R + EF C ++L E ++ D+R L YS+ + V T I +PD T
Sbjct: 1371 RIAQDEF-CQNSNLTEYSAWLVDGDLRPSWSLYYSIRRIVATQMTSLWCITTNPDRLSTS 1429
Query: 1628 SDLDKEESFSQLPKD------SLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEK 1681
D +QLP + +L D+Q K P +EN S RE YK
Sbjct: 1430 QD-------NQLPAEYKEYIGNLKDYQLKFD-PNYEN----SPEILMKRENYK------- 1470
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
+ R +++ +LID+IPNLAGL RTCEVFK L +
Sbjct: 1471 -------------------KNKRSDLIVIGTLIDKIPNLAGLTRTCEVFKVGKLLLKTRK 1511
Query: 1742 ILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
+L+D F+ ISVTAEKW+PI E+ ++I ++ + +G+ ++ +EQTA+SI L ++FP
Sbjct: 1512 VLNDPIFRQISVTAEKWLPIDELRESNICKYIHSMRLQGYIIIAVEQTASSILLPDFIFP 1571
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
KK++L+LG+EKEGIP DII M+D C+EIPQ G++RSLNVHVS +I ++ Y+ Q
Sbjct: 1572 KKSILILGKEKEGIPCDIISMVDKCLEIPQYGLIRSLNVHVSASICIYAYSNQHN 1626
>gi|301096890|ref|XP_002897541.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262107001|gb|EEY65053.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 647
Score = 194 bits (492), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 235/470 (50%), Gaps = 59/470 (12%)
Query: 1400 QVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPS-LVAEQLVPILRDYDMRPQALSSYV 1458
Q H L+ Y S Q +E F + + KFP+ + + L+P+L D ++ PQ +S +
Sbjct: 213 QKQHMLNSDGYCICCASTAQCMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLL 272
Query: 1459 FIAANVILHASKAVQFRHLE----DLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFP-- 1512
++A ++ + L+ +LL ++P L + H G+T++L +L K+ P
Sbjct: 273 LVSAYLV---DTKLDDNSLDVDCGELLETMLPWLNTSH----GYTRVLAQYLLAKVLPRH 325
Query: 1513 TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDA----YDPNLSITPAVIF 1568
S K E YL+ N +C R+ + LD Y+ +L + F
Sbjct: 326 IHYLKQSSKDTPGLRFLEGTARYLSNNKECKRMLRRQARQLDEFHPDYESSLLGMLSSGF 385
Query: 1569 VNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLS 1628
++ EL +P + L F E L+ +M + + E+ P +E S
Sbjct: 386 ISEFGEL----LPR---DDALRF----SEQLKTAMNELYAQYQLENFP----PTPSEQKS 430
Query: 1629 DLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQ 1688
++ + +L Q+KI +++ A + + +
Sbjct: 431 SMETDSV------SGILTVQRKI----------DTTALLLEDSALPAAMRADFDAARRGA 474
Query: 1689 VLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQ 1747
L AR + RQ ++ ASL+D++PNLAGLARTCE+F A L + + + D
Sbjct: 475 TLNAR-------QRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVT 527
Query: 1748 FQLISVTAEKWVPIVEVPV--NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
F +S TA KW+P+ EV + ++ L R K EG++++ +EQTA+S+ L Y P+K V
Sbjct: 528 FVNVSATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMV 587
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LVLGREKEGIPV+++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 588 LVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 637
>gi|334322150|ref|XP_003340192.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase
TARBP1-like [Monodelphis domestica]
Length = 1657
Score = 192 bits (488), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 246/520 (47%), Gaps = 79/520 (15%)
Query: 1361 DKDL----ARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPS 1416
DKD+ ++ Y S HR K R WQ + +L D + ++ + + + NN S
Sbjct: 1184 DKDVLVSRSKARYYVNSLQHRVKNRVWQALLVLFPKFDQIFLDKIIGKIFEAGFVNNQAS 1243
Query: 1417 VRQYLETFAITIYLKFPSLVAEQLVPILRD---YDMRPQALSSYVFIAANVILHASKAVQ 1473
++ +E I I KFP Q +P + Y +S F++ V+ H +Q
Sbjct: 1244 IKYLVEWIIILILHKFP-----QFLPKFWNCFCYGEEKLIMSICTFLS--VLSHLDIIIQ 1296
Query: 1474 FRHLEDLLPPIVPLLT-------SHHHSLRGFTQLLVYQV--LCKLFPTLDFGTSQKMPL 1524
++ D+ P + LT +H+ S+R + L + ++ LCK +F + +
Sbjct: 1297 --NIPDMKPVLKQALTVVLQWCFNHNFSVRLYALLALKKIWALCKTLHVEEFDALTAV-I 1353
Query: 1525 EKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSL 1584
E S + + A N+ R + + P + IF
Sbjct: 1354 ESSLHQVENMHGAGNAKKNWQRIQEHFFFAKFHPLKDYSLETIFYT-------------- 1399
Query: 1585 MEQVLNFLNDVREDLRYSMAK-----DVVTIKNESLKIGEDPDCAETLSDLDKEE----S 1635
L L+++ ED ++ K D+ + + C SD +++ S
Sbjct: 1400 ----LPRLSELVEDEWITIGKFIKFTDIPIDSAFQWYLSQTELCELKPSDWSQQDIGSNS 1455
Query: 1636 FSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSL 1695
+ + +D QKK+ K+ D F +R A
Sbjct: 1456 VDEDNQSEWIDVQKKMIPWKNNVPDLELELIFPDRAA----------------------- 1492
Query: 1696 AMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
+ S + ++VASLID+ NL GL RTCE+F AS L + + ++DKQFQ +SV+A
Sbjct: 1493 ---KLGKSISRLIVVASLIDKPTNLGGLCRTCEIFGASALVVGSLHCINDKQFQHLSVSA 1549
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++ +G+EQTA S L +Y FP+K++L+LG E+EGI
Sbjct: 1550 EQWLPLVEVKPLQLVDYLQKKKTEGYTTIGVEQTAKSSDLTEYCFPEKSLLLLGNEREGI 1609
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1610 PANLIQHLDVCVEIPQHGIIRSLNVHVSGALLIWEYTRQQ 1649
>gi|390348107|ref|XP_782457.3| PREDICTED: probable methyltransferase TARBP1-like [Strongylocentrotus
purpuratus]
Length = 1354
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 246/530 (46%), Gaps = 84/530 (15%)
Query: 1350 FLLGLLDFVVNDKDL--ARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHI 1407
FL LLD D+++ + Y S +HR K+R WQ I+ F+ D ++ +
Sbjct: 879 FLSSLLD---KDQEIIPKKRSYIINSVVHRLKLRIWQAAIIILNFLSPDAAPRILARVLR 935
Query: 1408 SLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILH 1467
S+ N SVR +E F + + P L+ + + + + S + I A++
Sbjct: 936 SMRAENQTSVRHLMEVFVVRMIHLHPHLLQQFWQYASEVANCQDVSFSPLLMIIAHLGTV 995
Query: 1468 ASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVL--CK---LFPTLDFGTSQKM 1522
K Q +P ++P +LR +Q+ ++++ CK L +D +
Sbjct: 996 QPKDQQESFYLQAIPTVLPWTFVPSMALRVQSQVALFKMWKDCKEAGLTTLMD-----RF 1050
Query: 1523 PLEKSCFEDLKSYLAKNSDCTRLRASMSG--YLDAYDPN--------LSITPAVIFVNRD 1572
P C + + NS LR M G +L + P I P + V D
Sbjct: 1051 PGVAVCMD----FTQNNSALHSLRERMEGSFFLSYFHPIQHFSVETIFYIMPKLTLVTED 1106
Query: 1573 KELE---FECVPTSLMEQVLNF----LNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAE 1625
+ + F TS +Q N L + LR K+ KN+S+K D + E
Sbjct: 1107 ELVHPELFLVSDTSPWKQNSNHPIVPLYSETDTLRTCTVKE--KQKNKSVK---DAEIRE 1161
Query: 1626 TLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDEL 1685
L D D QKKIT K + SS
Sbjct: 1162 VL-----------WTDDGSGDIQKKITPWKESHIPGFESS-------------------- 1190
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
E ++ R V+VASLI R+PNL GL RTCE+F AS L + + +
Sbjct: 1191 ------------EGQKSPRGHLVVVASLISRVPNLGGLCRTCEIFGASCLVLGNLALKDH 1238
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
+ F +SV+AE+W+P+ EV + +K ++ K G++++G+EQTANS L + FP++T+
Sbjct: 1239 QDFLSLSVSAERWLPLREVKPSDLKDYMIEMKKHGYTLVGVEQTANSQSLTDFKFPQRTM 1298
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
L+LG+E+EGIPV++I LD C+EIPQLG +RSLNVHVSGA+ +WEYTRQ+
Sbjct: 1299 LLLGKEREGIPVELIQFLDVCVEIPQLGFIRSLNVHVSGALMIWEYTRQK 1348
Score = 55.8 bits (133), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 49/280 (17%)
Query: 357 AVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMT 416
V+ FW+ I++GL+ L RK+ +++K + + + RS G+ S G+
Sbjct: 8 GVKLFWKLIQQGLIHTNPLTRKRCSYLMKRAVDV--------AATSGRSIGQGS--HGLD 57
Query: 417 KRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNHQIT 476
++ L++ A+ + +L W F L+YE LEE H+V A +
Sbjct: 58 EQPLFSWNPAEKEKLLRL--------------WFEFFLIYETLEEVQIHVVTPA----MP 99
Query: 477 LLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGI 536
L Q + L G+ + WL +L++R F H + + + + L +
Sbjct: 100 RLAQLTKATYRLDGAGIPIMHS---------SWLCILYQRCFVHESKTITRLGVTQCLNL 150
Query: 537 EWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQYASFL- 595
+ +S P F+ GP + L++ + S I A L ++ F
Sbjct: 151 DLDKSSFLHQSGPR-FIFGPLLTALHEEYLYTKPPETPPGSQPPIGLA---LKKFMVFCV 206
Query: 596 -----DTRKQIAFLSNLASVAKQQSFGRVGLMALAECIAS 630
DTRK FLS+L ++ +Q++G V + +AE +AS
Sbjct: 207 SQLNDDTRK--TFLSDLLALICEQAWGPVTISFVAEALAS 244
>gi|410975079|ref|XP_004001501.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase TARBP1
[Felis catus]
Length = 1594
Score = 191 bits (484), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 117/153 (76%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF AS L + DKQFQ +SV+AE+W+P+V
Sbjct: 1433 SISRLIVVASLIDKPTNLGGLCRTCEVFGASALTVGSLQCTRDKQFQCLSVSAEQWLPLV 1492
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + FL++KK EG++V+G+EQTA S+ L QY FP++++L+LG E+EGIP ++I
Sbjct: 1493 EVRPPQLIDFLQQKKAEGYTVIGVEQTARSVDLTQYSFPERSLLLLGNEREGIPANLIQQ 1552
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1553 LDVCVEIPQRGIIRSLNVHVSGALLIWEYTRQQ 1585
>gi|355746286|gb|EHH50911.1| hypothetical protein EGM_01813, partial [Macaca fascicularis]
Length = 1353
Score = 190 bits (483), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1185 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCISDKQFQHLSVSA 1244
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1245 EQWLPLVEVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1304
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1305 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1344
>gi|355559162|gb|EHH15942.1| hypothetical protein EGK_02122, partial [Macaca mulatta]
Length = 1312
Score = 190 bits (483), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1144 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCISDKQFQHLSVSA 1203
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1204 EQWLPLVEVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1263
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1264 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1303
>gi|431895664|gb|ELK05090.1| Putative methyltransferase TARBP1 [Pteropus alecto]
Length = 280
Score = 190 bits (483), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 118/149 (79%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASLID+ NL GL RTCEVF AS L +A+ ++D+QFQ +SV+AE+W+P+VEV
Sbjct: 112 LIVVASLIDKAANLGGLCRTCEVFGASALVLANPQCVNDRQFQHLSVSAEQWLPLVEVKP 171
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ +L++KK EG+S++G+EQTA S+ L QY FP+K++L+LG E+EGIP +I LD C
Sbjct: 172 PQLTDYLQQKKAEGYSIIGVEQTARSVALTQYRFPEKSLLLLGNEREGIPAALIQQLDVC 231
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ GV+RSLNVHVSGA+ +WEYTRQ+
Sbjct: 232 VEIPQQGVIRSLNVHVSGALLVWEYTRQR 260
>gi|296230937|ref|XP_002807779.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase TARBP1
[Callithrix jacchus]
Length = 1626
Score = 190 bits (482), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1458 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQYLSVSA 1517
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1518 EQWLPLVEVKPPQLTAYLQQKKTEGYTIIGVEQTARSLDLTQYCFPEKSLLLLGNEREGI 1577
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1578 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1617
>gi|402858626|ref|XP_003893794.1| PREDICTED: probable methyltransferase TARBP1 [Papio anubis]
Length = 1621
Score = 189 bits (481), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1453 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCISDKQFQHLSVSA 1512
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1513 EQWLPLVEVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1572
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1573 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1612
>gi|301787005|ref|XP_002928920.1| PREDICTED: probable methyltransferase TARBP1-like [Ailuropoda
melanoleuca]
Length = 1548
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 117/150 (78%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ N+ GL RTCEVF AS L + + DKQFQ +SV+AE+W+P+VEV
Sbjct: 1390 RLIVVASLIDKPTNVGGLCRTCEVFGASALVVGSLQCVTDKQFQGLSVSAEQWLPLVEVK 1449
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ FL++KK EG++V+G+EQTA S+ L QY FP++++L+LG E+EGIP ++I LD
Sbjct: 1450 PPQLIDFLQQKKAEGYTVIGVEQTAKSVDLSQYSFPERSLLLLGNEREGIPANLIQQLDV 1509
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1510 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1539
>gi|281342333|gb|EFB17917.1| hypothetical protein PANDA_018980 [Ailuropoda melanoleuca]
Length = 1374
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ N+ GL RTCEVF AS L + + DKQFQ +SV+AE+W+P+V
Sbjct: 1214 SISRLIVVASLIDKPTNVGGLCRTCEVFGASALVVGSLQCVTDKQFQGLSVSAEQWLPLV 1273
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + FL++KK EG++V+G+EQTA S+ L QY FP++++L+LG E+EGIP ++I
Sbjct: 1274 EVKPPQLIDFLQQKKAEGYTVIGVEQTAKSVDLSQYSFPERSLLLLGNEREGIPANLIQQ 1333
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1334 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1366
>gi|380796315|gb|AFE70033.1| putative methyltransferase TARBP1, partial [Macaca mulatta]
Length = 1351
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1183 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCISDKQFQHLSVSA 1242
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+V+V + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1243 EQWLPLVQVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1302
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1303 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1342
>gi|112491246|pdb|2HA8|A Chain A, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
gi|112491247|pdb|2HA8|B Chain B, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
Length = 184
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 16 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 75
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 76 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 135
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 136 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 175
>gi|291402154|ref|XP_002717373.1| PREDICTED: TAR RNA binding protein 1 [Oryctolagus cuniculus]
Length = 1629
Score = 189 bits (480), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 120/153 (78%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF AS LA+ + + DKQFQ +SV+AE+W+P+V
Sbjct: 1459 SNSRLIVVASLIDKATNLGGLCRTCEVFGASVLAVGNLQCVSDKQFQHLSVSAEQWLPLV 1518
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I
Sbjct: 1519 EVRPPQLVDYLQQKKAEGYTIIGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQ 1578
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ GVVRSLNVHVSGA+ +WEYTRQ+
Sbjct: 1579 LDVCVEIPQQGVVRSLNVHVSGALLIWEYTRQR 1611
>gi|397508285|ref|XP_003824592.1| PREDICTED: probable methyltransferase TARBP1, partial [Pan paniscus]
Length = 1363
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1195 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 1254
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1255 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTARSLDLTQYCFPEKSLLLLGNEREGI 1314
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1315 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1354
Score = 41.2 bits (95), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1346 SGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ L +++ +L + K+Y S HR K R WQ + +L +D + + +
Sbjct: 875 SHKLFMEDLAIKLLDKDELVSKSKKRYCVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGII 934
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAE 1438
+ + + NN S++ ++E I I KFP + +
Sbjct: 935 DRIFQAGFTNNQASIKYFIEWIIILILHKFPQFLPK 970
>gi|345798825|ref|XP_536342.3| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase TARBP1
[Canis lupus familiaris]
Length = 1767
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 117/150 (78%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+AE+W+P+VEV
Sbjct: 1609 RLIVVASLIDKPTNLGGLCRTCEVFGASALIVDSLQCVRDKQFQSLSVSAEQWLPLVEVK 1668
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ FL++KK EG++V+G+EQTA S+ L QY FP++++L+LG E+EGIP ++I LD
Sbjct: 1669 PPQLIDFLQQKKAEGYTVIGVEQTAKSVDLTQYSFPERSLLLLGNEREGIPANLIQELDV 1728
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1729 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1758
>gi|426334244|ref|XP_004028668.1| PREDICTED: probable methyltransferase TARBP1, partial [Gorilla
gorilla gorilla]
Length = 1361
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1193 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 1252
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1253 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1312
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1313 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1352
Score = 41.6 bits (96), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1346 SGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ L +++ +L + K+Y S HR K R WQ + +L +D + + +
Sbjct: 884 SHKLFMEDLAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGII 943
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAE 1438
+ + + NN S++ ++E I I KFP + +
Sbjct: 944 DRIFQAGFTNNQASIKYFIEWIIILILHKFPQFLPK 979
>gi|332236257|ref|XP_003267321.1| PREDICTED: probable methyltransferase TARBP1 [Nomascus leucogenys]
Length = 1621
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1453 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 1512
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1513 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1572
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1573 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1612
>gi|403300227|ref|XP_003940853.1| PREDICTED: probable methyltransferase TARBP1 [Saimiri boliviensis
boliviensis]
Length = 1447
Score = 189 bits (479), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + D+QFQ +SV+A
Sbjct: 1279 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDRQFQYLSVSA 1338
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1339 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1398
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1399 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1438
>gi|114573243|ref|XP_514281.2| PREDICTED: probable methyltransferase TARBP1 [Pan troglodytes]
Length = 1621
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1453 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 1512
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1513 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTARSLDLTQYCFPEKSLLLLGNEREGI 1572
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1573 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1612
Score = 41.6 bits (96), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1346 SGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ L +++ +L + K+Y S HR K R WQ + +L +D + + +
Sbjct: 1133 SHKLFMEDLAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGII 1192
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAE 1438
+ + + NN S++ ++E I I KFP + +
Sbjct: 1193 DRIFQAGFTNNQASIKYFIEWIIILILHKFPQFLPK 1228
>gi|109019959|ref|XP_001102931.1| PREDICTED: probable methyltransferase TARBP1-like [Macaca mulatta]
Length = 1623
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1455 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCISDKQFQHLSVSA 1514
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+V+V + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1515 EQWLPLVQVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1574
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1575 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1614
>gi|110825988|ref|NP_005637.3| probable methyltransferase TARBP1 [Homo sapiens]
gi|74739787|sp|Q13395.1|TARB1_HUMAN RecName: Full=Probable methyltransferase TARBP1; AltName: Full=TAR
RNA-binding protein 1; AltName: Full=TAR RNA-binding
protein of 185 kDa; Short=TRP-185
gi|1184692|gb|AAC50379.1| TAR RNA loop binding protein [Homo sapiens]
gi|119590399|gb|EAW69993.1| Tar (HIV-1) RNA binding protein 1 [Homo sapiens]
gi|162318782|gb|AAI56250.1| TAR (HIV-1) RNA binding protein 1 [synthetic construct]
gi|1586092|prf||2203267A TRP-185 protein
Length = 1621
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+A
Sbjct: 1453 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSA 1512
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 1513 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 1572
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1573 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1612
Score = 41.2 bits (95), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1346 SGKLFLLGLLDFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
S KLF+ L +++ +L + K+Y S HR K R WQ + +L +D + + +
Sbjct: 1133 SHKLFIEDLAIKLLDKDELVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGII 1192
Query: 1403 HFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAE 1438
+ + + NN S++ ++E I I KFP + +
Sbjct: 1193 DRIFQAGFTNNQASIKYFIEWIIILILHKFPQFLPK 1228
>gi|297661624|ref|XP_002809335.1| PREDICTED: probable methyltransferase TARBP1-like [Pongo abelii]
Length = 348
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + ++VASLID+ NL GL RTCEVF AS L I + DKQFQ +SV+A
Sbjct: 180 RAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVIGSLQCISDKQFQHLSVSA 239
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGI
Sbjct: 240 EQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGI 299
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 300 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 339
>gi|311271147|ref|XP_001927654.2| PREDICTED: probable methyltransferase TARBP1 isoform 1 [Sus scrofa]
Length = 1628
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 121/160 (75%), Gaps = 5/160 (3%)
Query: 1701 RASR-----QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
RA+R + V+VASLID+ NL GL RTCEVF AS L ++ + DKQFQ +SV+A
Sbjct: 1460 RAARLGKSISRLVVVASLIDKPTNLGGLCRTCEVFGASALVVSSLQCIRDKQFQHLSVSA 1519
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
E+W+P+VEV + +L+ KK EG++++G+EQTA S+ L Q+ FP+K++L+LG E+EGI
Sbjct: 1520 EQWLPLVEVKPPQLIDYLQEKKAEGYTIVGVEQTARSVDLTQFCFPEKSLLLLGNEREGI 1579
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1580 PANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1619
>gi|449497259|ref|XP_002191709.2| PREDICTED: probable methyltransferase TARBP1 [Taeniopygia guttata]
Length = 1330
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RT E+F AS L + + + DKQFQ +SV+AE+W+P+V
Sbjct: 1171 SNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLV 1230
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + + +L++KK EG++++G+EQTA S L +Y FP+K++L+LG E EGIP ++IH
Sbjct: 1231 EVKPSQLVDYLQQKKTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHH 1290
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1291 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1323
>gi|392355130|ref|XP_003751948.1| PREDICTED: probable methyltransferase TARBP1-like [Rattus norvegicus]
Length = 1491
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 145/237 (61%), Gaps = 34/237 (14%)
Query: 1619 EDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLE 1678
ED + TL + D + ++ D QKKI H D+ LE
Sbjct: 1280 EDMTLSSTLGEADSQSEWA--------DVQKKIIPWGHSALDSD--------------LE 1317
Query: 1679 IEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA 1738
+E +D +A L R ++VASLID+ NL GL RTCEVF A+ L +
Sbjct: 1318 LEFQD-------RAAKLGKSISR-----LIVVASLIDKPTNLGGLCRTCEVFGAAVLVVG 1365
Query: 1739 DANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ D+QFQ +SV+AE+W+P+VEV + + +L++KK EG++V+G+EQTA S L QY
Sbjct: 1366 SLQCVSDRQFQHLSVSAEQWLPLVEVRPSQLVDYLQQKKAEGYTVIGVEQTAQSSDLAQY 1425
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++L+LG E+EGIPV++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1426 RFPEKSLLLLGNEREGIPVNLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1482
>gi|395531601|ref|XP_003775351.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase TARBP1,
partial [Sarcophilus harrisii]
Length = 1341
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 140/207 (67%), Gaps = 14/207 (6%)
Query: 1658 NQDNSSSSFFGNREAYKQLLEIEKE---------DELFDQVLQARSLAMETIRASRQQFV 1708
QD S+S G+ + + ++++K+ D D V Q R+ + S + +
Sbjct: 1132 QQDIGSNSVEGDSQL--EWIDVQKKVIPWKNNVSDLELDLVFQDRA---AKLGKSISRLI 1186
Query: 1709 LVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNS 1768
+VASLID+ NL GL RTCE+F AS L + + ++DKQFQ +SV+AE+W+P+VEV
Sbjct: 1187 VVASLIDKPTNLGGLCRTCEIFGASALVVGSLHCINDKQFQYLSVSAEQWLPLVEVKPLQ 1246
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIE 1828
+ +L++KK EG++ +G+EQTA S L +Y FP+K++L+LG E+EGIP ++I LD C+E
Sbjct: 1247 LVDYLQKKKTEGYTTIGVEQTARSSDLTEYCFPEKSLLLLGNEREGIPANLIQHLDVCVE 1306
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
IPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1307 IPQHGIIRSLNVHVSGALLIWEYTRQQ 1333
>gi|363731616|ref|XP_419559.3| PREDICTED: probable methyltransferase TARBP1 [Gallus gallus]
Length = 1334
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
+ VLQ R+ + S + ++VASLID+ NL GL RT E+F AS L + + + D
Sbjct: 1160 LEMVLQDRA---AKLGKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYVQD 1216
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
KQFQ +SV+AE+W+P+VEV + + +L++KK EG++ +G+EQTA S L +Y FP+K++
Sbjct: 1217 KQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEGYTAIGVEQTAKSYDLTEYCFPEKSL 1276
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
L+LG E EGIP ++IH LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1277 LLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1326
>gi|348507284|ref|XP_003441186.1| PREDICTED: probable methyltransferase TARBP1-like [Oreochromis
niloticus]
Length = 1621
Score = 187 bits (476), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 155/515 (30%), Positives = 255/515 (49%), Gaps = 59/515 (11%)
Query: 1355 LDFVVNDKDLARELYKKYSAI--HRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRN 1412
++ + D D++R + YS HR K R WQ + +L + + V + + + + +
Sbjct: 1139 MELLKKDNDISRSKVRYYSNSLQHRVKNRVWQTLLLLLPKLREEFVATLWGRVFEAGFCS 1198
Query: 1413 NLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSY--VFIAANVILHA-- 1468
N SV+ +E I I +++P D++ ++ ++ V + +VI
Sbjct: 1199 NQASVKYLIEWMMILILVRYPQHTDSFWSCFSLDHEKTKTSVCTFLSVLVHFSVIFPKLK 1258
Query: 1469 SKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQV--LCKLFPTLDFGTSQKMPLEK 1526
KA Q R D+ I+ +H+ S+R + L + +V L + G + K
Sbjct: 1259 EKAAQLRKALDV---ILQSCFNHNFSVRLYALLALKRVWSLAENLVEEADGLGGLSSVIK 1315
Query: 1527 SCF---EDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEF---ECV 1580
+C E ++S N + TR++ + A+ P + IF E E +
Sbjct: 1316 ACLNQAEAMQSTGNANKNWTRIQEHF--FFGAFHPIRDYSTETIFCTFPSLSELADDEWI 1373
Query: 1581 PTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLP 1640
P E++ F D LR + A D+ ++ I +D S+ DKEE ++++
Sbjct: 1374 PPWKFEKLSYFSEDPSLPLR-NPAPDLNQLQPGDW-IQQD------RSEQDKEERWAEV- 1424
Query: 1641 KDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETI 1700
QKKIT + L I++++ V R+ + +
Sbjct: 1425 -------QKKITPWR---------------------LGIQEQEPELQLVPPQRAARLGKL 1456
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ ++VASLID+ NL GL RTCE+F AS L + ++DK FQ +SV+AE W+P
Sbjct: 1457 HGA---LLVVASLIDKPTNLGGLCRTCEIFGASALVLDSLRHVNDKNFQSLSVSAELWLP 1513
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
++EV + FL+ KK EG+ ++G+EQTANS L +Y FP+KT+L+LG E+EGIP +++
Sbjct: 1514 LLEVKPMELTEFLQVKKSEGYCIVGVEQTANSHSLQEYQFPEKTLLLLGNEREGIPANLL 1573
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
MLD C+EIPQ G++RSLNVHVS A+ +WEYTRQ
Sbjct: 1574 QMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQH 1608
Score = 42.4 bits (98), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 41/221 (18%)
Query: 352 EFDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNST 411
+ D R +FW ++ GL+ + + RK++L +LK + E+ +S R
Sbjct: 257 DLDPRLSLQFWTMVQDGLIHSDSVSRKRALFLLKRCAALSEEDGLDCPLSATRED----- 311
Query: 412 ARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAW 471
+ K WA + K L ++ WE ++L+ E LEE H+V
Sbjct: 312 -ENLFK---WASSKNKLL----------------REFWEDYVLVMETLEENQIHVVRPVL 351
Query: 472 NHQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQ 531
N +I L+Q + D Q PS WL +++R F N + +
Sbjct: 352 N-RIDTLIQTTANDDQ--------GQGLFHPS-----WLLCVYQRMFHSENKSLMREGVC 397
Query: 532 SFLGIEWKSYENCAKSVPESFLLGPFMEGLNDP-VHHKDFG 571
L + A + + F++GPFM+ L++ + H+ G
Sbjct: 398 HLLELRVLQQPTFALAFSQ-FIVGPFMDVLSETSLFHRSVG 437
>gi|328791993|ref|XP_001123107.2| PREDICTED: hypothetical protein LOC727398 [Apis mellifera]
Length = 1348
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 157/498 (31%), Positives = 239/498 (47%), Gaps = 52/498 (10%)
Query: 1369 YKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHF-LHISLYRNNLPSVRQYLETFAIT 1427
Y YS IH+ K R Q++ I+ + D + + F L++ L +N SVR E I
Sbjct: 889 YFNYSYIHKIKHRIMQILLIMQPILTKDDIITLQEFLLNLLLLESNQHSVRIMQEWILIK 948
Query: 1428 IYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPL 1487
I+++ + + +RP +SS + I ++ SK Q + L I
Sbjct: 949 IFVENVEFHHKIWEIFEKGITIRPGCVSSIICIVYHISKLLSKDSQSNFILTALNYIGRC 1008
Query: 1488 LTSHHHSLRGFTQLL---VYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTR 1544
+++R + Q++ +Y++L +L P D Q L + LK L +NS
Sbjct: 1009 CLGQQYNMRLYAQIIFVKLYKMLEQLNP--DHVILQYEGLYNAAITSLKDGLIRNSS--- 1063
Query: 1545 LRASMSGYLDAYDPNLSITPAVIFVNRDKELEFEC----VPTSLMEQVLNFLNDVREDLR 1600
+ YL + P L T I++ + + + +P +LNF L+
Sbjct: 1064 -KIENDFYLSTFHPILDYTLQTIYLELPRLTDMDASEWIIPNFF--TILNFKKFNGHALQ 1120
Query: 1601 -YSMAKDVVTIKNESLKIGEDPDCAETLS--DLDKEESFSQLPKDSLLDFQKKITLPKHE 1657
Y++ K + IK S I D + ++D EE L D QKKI
Sbjct: 1121 LYNLNKSLSDIKTSSYLIKRSGDTEPFIKKCNMDFEE---------LSDIQKKINPIMTI 1171
Query: 1658 NQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRI 1717
N N +++F + ++ S + + ++VA L+ RI
Sbjct: 1172 NLSN---------------------NDIFPTIRESIS---HKKTSDEESLIVVACLLSRI 1207
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
PNL GLARTCE+F L IA+ N + DK+FQ +SV+AE W+ I E+ + +L KK
Sbjct: 1208 PNLGGLARTCEIFNVKELVIANLNQVKDKEFQNLSVSAENWITITEIKPYELCKYLLDKK 1267
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++G+EQTANSI L F KKT+LVLG EK GIP ++I + D CIEIPQ GV+RS
Sbjct: 1268 DMGWSLVGVEQTANSINLLNMKFEKKTILVLGNEKNGIPANLIPLFDTCIEIPQAGVIRS 1327
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LNVHVSGAI +W+Y +Q
Sbjct: 1328 LNVHVSGAICIWQYAKQH 1345
>gi|426256046|ref|XP_004021656.1| PREDICTED: probable methyltransferase TARBP1 [Ovis aries]
Length = 1498
Score = 187 bits (475), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 119/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A+ L + + + DKQFQ +SV+AE+W+P+V
Sbjct: 1337 SISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGNLQCVRDKQFQHLSVSAEQWLPLV 1396
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I
Sbjct: 1397 EVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQ 1456
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1457 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1489
>gi|229577450|ref|NP_001153379.1| TAR (HIV-1) RNA binding protein 1 [Mus musculus]
Length = 1579
Score = 187 bits (475), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 152/237 (64%), Gaps = 12/237 (5%)
Query: 1630 LDKEESFSQLPKDSLLDFQKKITL-----PKHENQDNSSSSFFGNREAYKQLLEIEKEDE 1684
LDK +F+ +P ++ + T P +Q + S+ G ++ + +++K+
Sbjct: 1335 LDKFANFTDIPSNAGSQWYLSGTALGELSPGDWSQQDQGSTL-GEADSQSEWADVQKKII 1393
Query: 1685 LFDQVLQARSLAME------TIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA 1738
+ Q L +E + S + ++VASLID+ NL GL RTCEVF A+ L +
Sbjct: 1394 PWGQSALESDLELEFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAVLVVG 1453
Query: 1739 DANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ D+QFQ +SV+AE+W+P+VEV + + ++L++KK EG++V+G+EQTA S L QY
Sbjct: 1454 SLQCVSDRQFQHLSVSAEQWLPLVEVRPSQLMNYLQQKKAEGYTVIGVEQTAQSSDLAQY 1513
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++L+LG E+EGIP ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1514 RFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1570
>gi|440901025|gb|ELR52034.1| Putative methyltransferase TARBP1, partial [Bos grunniens mutus]
Length = 1405
Score = 186 bits (473), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A+ L + + DKQFQ +SV+AE+W+P+V
Sbjct: 1244 SISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLV 1303
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I
Sbjct: 1304 EVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQ 1363
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1364 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1396
>gi|194206115|ref|XP_001916608.1| PREDICTED: probable methyltransferase TARBP1 [Equus caballus]
Length = 1468
Score = 186 bits (473), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A L + + + DKQFQ +SV+AE+W+P+V
Sbjct: 1307 SISRLIVVASLIDKPTNLGGLCRTCEVFGALVLVVGSLHCVKDKQFQHLSVSAEQWLPLV 1366
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGIP ++I
Sbjct: 1367 EVKPPQLIDYLQQKKAEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQ 1426
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1427 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1459
>gi|344278537|ref|XP_003411050.1| PREDICTED: probable methyltransferase TARBP1 [Loxodonta africana]
Length = 1659
Score = 186 bits (473), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 117/150 (78%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++V SLID+ NL GL RTCE+F AS + + + + DKQFQ +SV+AE+W+P+VEV
Sbjct: 1506 RLIVVGSLIDKPTNLGGLCRTCEIFGASVFVVGNLHCISDKQFQHLSVSAEQWLPLVEVK 1565
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGIP ++I LD
Sbjct: 1566 PPQLIDYLQQKKAEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDV 1625
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1626 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1655
>gi|194679306|ref|XP_614988.4| PREDICTED: probable methyltransferase TARBP1, partial [Bos taurus]
Length = 1407
Score = 186 bits (473), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A+ L + + DKQFQ +SV+AE+W+P+V
Sbjct: 1246 SISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLV 1305
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I
Sbjct: 1306 EVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQ 1365
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1366 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1398
>gi|148679865|gb|EDL11812.1| mCG129058 [Mus musculus]
Length = 1534
Score = 186 bits (473), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 151/237 (63%), Gaps = 12/237 (5%)
Query: 1630 LDKEESFSQLPKDSLLDFQKKITL-----PKHENQDNSSSSFFGNREAYKQLLEIEKEDE 1684
LDK +F+ +P ++ + T P +Q + S+ G ++ + +++K+
Sbjct: 1290 LDKFANFTDIPSNAGSQWYLSGTALGELSPGDWSQQDQGSTL-GEADSQSEWADVQKKII 1348
Query: 1685 LFDQVLQARSLAME------TIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA 1738
+ Q L +E + S + ++VASLID+ NL GL RTCEVF A+ L +
Sbjct: 1349 PWGQSALESDLELEFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAVLVVG 1408
Query: 1739 DANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ D+QFQ +SV+AE+W+P+VEV + + +L++KK EG++V+G+EQTA S L QY
Sbjct: 1409 SLQCVSDRQFQHLSVSAEQWLPLVEVRPSQLMDYLQQKKAEGYTVIGVEQTAQSSDLAQY 1468
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++L+LG E+EGIP ++I LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1469 RFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1525
>gi|359080663|ref|XP_002698855.2| PREDICTED: probable methyltransferase TARBP1 [Bos taurus]
Length = 1473
Score = 186 bits (472), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 117/150 (78%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ NL GL RTCEVF A+ L + + DKQFQ +SV+AE+W+P+VEV
Sbjct: 1315 RLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLVEVK 1374
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I LD
Sbjct: 1375 PPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQLDV 1434
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1435 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1464
>gi|354468874|ref|XP_003496875.1| PREDICTED: probable methyltransferase TARBP1-like [Cricetulus
griseus]
Length = 1462
Score = 186 bits (472), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 116/150 (77%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ NL GL RTCEVF A+ L + + D+QFQ +SV+AE+W+P+VEV
Sbjct: 1304 RLIVVASLIDKPTNLGGLCRTCEVFGAAVLVVGSLQCVSDRQFQHLSVSAEQWLPLVEVR 1363
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L++KK EG++V+G+EQTA S L QY FP+K++L+LG E+EGIP ++I LD
Sbjct: 1364 PAQLTDYLQQKKAEGYTVIGVEQTAQSSDLAQYRFPEKSLLLLGNEREGIPANLIQQLDV 1423
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1424 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1453
Score = 43.5 bits (101), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 1313 ELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKD----LAREL 1368
+ Y R+ AV F L D ++I S KLF+ L + DKD +R
Sbjct: 954 DYYVRI-CAVKFLCLLDGSDI------------SHKLFIEDL-AIQLLDKDESTSRSRTR 999
Query: 1369 YKKYSAIHRRKVRAWQMICIL-SRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAIT 1427
Y + S HR K RAWQ + +L RF N + G + H + NN S++ ++E I
Sbjct: 1000 YHENSLQHRVKNRAWQTLLVLFPRFDQNFLNGIIDKIFHAG-FTNNQASIKYFIEWIIIL 1058
Query: 1428 IYLKFPSLV 1436
I KFP +
Sbjct: 1059 ILHKFPQFL 1067
>gi|344247229|gb|EGW03333.1| putative methyltransferase TARBP1 [Cricetulus griseus]
Length = 1048
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 116/150 (77%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ NL GL RTCEVF A+ L + + D+QFQ +SV+AE+W+P+VEV
Sbjct: 890 RLIVVASLIDKPTNLGGLCRTCEVFGAAVLVVGSLQCVSDRQFQHLSVSAEQWLPLVEVR 949
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L++KK EG++V+G+EQTA S L QY FP+K++L+LG E+EGIP ++I LD
Sbjct: 950 PAQLTDYLQQKKAEGYTVIGVEQTAQSSDLAQYRFPEKSLLLLGNEREGIPANLIQQLDV 1009
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1010 CVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1039
Score = 43.1 bits (100), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 1313 ELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKD----LAREL 1368
+ Y R+ AV F L D ++I S KLF+ L ++ DKD +R
Sbjct: 540 DYYVRI-CAVKFLCLLDGSDI------------SHKLFIEDLAIQLL-DKDESTSRSRTR 585
Query: 1369 YKKYSAIHRRKVRAWQMICIL-SRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAIT 1427
Y + S HR K RAWQ + +L RF N + G + H + NN S++ ++E I
Sbjct: 586 YHENSLQHRVKNRAWQTLLVLFPRFDQNFLNGIIDKIFHAG-FTNNQASIKYFIEWIIIL 644
Query: 1428 IYLKFPSLV 1436
I KFP +
Sbjct: 645 ILHKFPQFL 653
>gi|296472224|tpg|DAA14339.1| TPA: TAR (HIV-1) RNA binding protein 1 [Bos taurus]
Length = 890
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A+ L + + DKQFQ +SV+AE+W+P+V
Sbjct: 729 SISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLSVSAEQWLPLV 788
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L +Y FP+K++L+LG E+EGIP ++I
Sbjct: 789 EVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNEREGIPANLIQQ 848
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 849 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 881
>gi|349603316|gb|AEP99192.1| putative methyltransferase TARBP1-like protein, partial [Equus
caballus]
Length = 357
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 118/153 (77%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A L + + + DKQFQ +SV+AE+W+P+V
Sbjct: 196 SISRLIVVASLIDKPTNLGGLCRTCEVFGALVLVVGSLHCVKDKQFQHLSVSAEQWLPLV 255
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +L++KK EG++++G+EQTA S+ L QY FP+K++L+LG E+EGIP ++I
Sbjct: 256 EVKPPQLIDYLQQKKAEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQ 315
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 316 LDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 348
>gi|327262182|ref|XP_003215904.1| PREDICTED: probable methyltransferase TARBP1-like [Anolis
carolinensis]
Length = 1589
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 116/153 (75%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASL+D+ NL GL RTCE+F S L + + +HDKQFQ +SV+AE+W+ ++
Sbjct: 1429 SNSKLIVVASLLDKPTNLGGLCRTCEIFGVSALIVGSIHYIHDKQFQYLSVSAEQWLSLL 1488
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
EV + +LE+KK EG++++G+EQTA S L +Y FP+K++L+LG E EGIP ++I
Sbjct: 1489 EVKPFQLADYLEQKKIEGYTIIGVEQTAKSCDLTEYSFPEKSLLLLGNEHEGIPANLIQQ 1548
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ GV+RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1549 LDTCVEIPQQGVIRSLNVHVSGALLIWEYTRQQ 1581
>gi|405952225|gb|EKC20062.1| Putative methyltransferase TARBP1 [Crassostrea gigas]
Length = 1489
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 113/158 (71%), Gaps = 4/158 (2%)
Query: 1702 ASRQQ----FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
A RQ +LV SLID++PNL GL RT E+F S I + DK FQ +SVTA K
Sbjct: 1321 AKRQHKSNGLILVTSLIDKVPNLGGLCRTSEIFGVSEFVINKLRYVEDKVFQSLSVTAHK 1380
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
WVPI EV + +L+ KK +G++++G+EQTANS+ L+ + FP KT+L+LG EKEGIP
Sbjct: 1381 WVPIREVYEACLPEYLQHKKSQGYTLVGVEQTANSVSLNDFRFPTKTLLLLGNEKEGIPA 1440
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D+I +LD C+EIPQ GV+RSLNVHVSGAI +WEY RQQ
Sbjct: 1441 DLISLLDVCVEIPQQGVIRSLNVHVSGAILVWEYRRQQ 1478
>gi|320163521|gb|EFW40420.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2069
Score = 184 bits (468), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 115/152 (75%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++VASLIDR+PNL GL RTCE+FKA L + D + D F+ +SVTA+KW+P+ +
Sbjct: 1910 RSDLIVVASLIDRVPNLGGLTRTCEIFKAGLLVMHDLRVTTDDTFKQLSVTADKWMPLKQ 1969
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V +++ +L++KK EG++++G+EQTA L + FP+K++++LGRE+ GIPVD+I +L
Sbjct: 1970 VEDHALPAYLKQKKSEGYTLVGVEQTAEGKRLSNFSFPQKSLILLGRERTGIPVDLIQLL 2029
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D C+EIPQ GVVRSLNVHVS A+ +WEY RQ
Sbjct: 2030 DVCVEIPQFGVVRSLNVHVSAALMVWEYARQH 2061
>gi|444727657|gb|ELW68137.1| putative methyltransferase TARBP1 [Tupaia chinensis]
Length = 1415
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 120/173 (69%), Gaps = 17/173 (9%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+R S + ++VASL D+ NL GL RTCEVF AS L + + +HD+QFQ +SV+AE+W+
Sbjct: 1216 LRKSVSRLIVVASLTDKATNLGGLCRTCEVFGASALVVGNLQCVHDRQFQALSVSAEQWL 1275
Query: 1760 PIVE-----------------VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
P+VE V + + +L+RKK EG++++G+EQTA S+ L QY FP+
Sbjct: 1276 PLVERAKTGRFNSLSFYTNDKVRPHQLTDYLQRKKAEGYTIIGVEQTARSVDLTQYCFPE 1335
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
K++L+LG E+EGIP ++I LD C+EIPQ G+ RSLNVHVSGA+ WEYTRQ+
Sbjct: 1336 KSLLLLGNEREGIPANLIQQLDVCVEIPQHGITRSLNVHVSGALLTWEYTRQR 1388
Score = 78.6 bits (192), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+R S + ++VASL D+ NL GL RTCEVF AS L + + +HD+QFQ +SV+AE+W+
Sbjct: 1069 LRKSVSRLIVVASLTDKATNLGGLCRTCEVFGASALVVGNLQCVHDRQFQALSVSAEQWL 1128
Query: 1760 PIVEV 1764
P+VEV
Sbjct: 1129 PLVEV 1133
>gi|449278092|gb|EMC86059.1| putative methyltransferase TARBP1, partial [Columba livia]
Length = 1306
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
+ V Q R+ + S + ++VASLID+ NL GL RT E+F AS L + + + D
Sbjct: 1132 LEMVFQDRATKL---GKSNSRLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYVQD 1188
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
KQFQ +SV+AE+W+P+VEV + + +L++KK EG++++G+EQTA S L +Y FP+K++
Sbjct: 1189 KQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKMEGYTIIGVEQTAKSFDLTEYCFPEKSL 1248
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
L+LG E EGIP ++IH LD C+EIPQ G++RSLNVHVSGA+ +WEYTR
Sbjct: 1249 LLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNVHVSGALLIWEYTR 1296
>gi|118374625|ref|XP_001020500.1| RNA methyltransferase, TrmH family protein [Tetrahymena thermophila]
gi|89302267|gb|EAS00255.1| RNA methyltransferase, TrmH family protein [Tetrahymena thermophila
SB210]
Length = 3004
Score = 184 bits (467), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 245/545 (44%), Gaps = 98/545 (17%)
Query: 1354 LLDFVVNDKD--LARELYKKY----------SAIHRRKVRAWQMICILSRFVDNDIVGQV 1401
L+DF + L R KKY + + K+R WQ +C++ F ++ +
Sbjct: 1604 LIDFYIKYTQNLLERNYQKKYQKSRNSLLPNTNHYNSKIRMWQCLCVIKDFFTEKVMNFI 1663
Query: 1402 THFLHISLYR------------------NNLPSVRQYLETFAITIYLKFPSLVAEQLVPI 1443
+ S Y NN ++RQY+E F + +Y +FP + ++
Sbjct: 1664 KNTFDQSEYNVDRLISDIKEKIWGILDFNNQVNIRQYIEVFTLHLYNEFPVYFEQSIIDG 1723
Query: 1444 LRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQL-- 1501
+++ + R Q VF+A + ++ + ++L ++P SH LR Q
Sbjct: 1724 IKEKNNRSQYSIPLVFMAGYQLCRKPNNLKAK---EVLSHLIPYTGSHVAYLRSIAQYFV 1780
Query: 1502 ---------LVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGY 1552
L+++ + L T ++ + ++L S+ +N + ++R +
Sbjct: 1781 SKFTEASKQLIFKSIINLTQTY-LKQDEEQIKDDILLKNLNSFFTENKESIKMRKTFDKI 1839
Query: 1553 LDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKN 1612
++ + + ++ D + E V +++E++ N V +L Y
Sbjct: 1840 VEKFQKVIENFNTEQLLSIDMDGNGEVVHENVIEEIKN----VCMNLIY----------- 1884
Query: 1613 ESLKIGED-PDCAETLSDLDKEESFSQLPKDSL---LDFQKKITLPKHENQDNSSSSFFG 1668
LK ED P + L L +E +P L +FQ+KI + ++E
Sbjct: 1885 -QLKEHEDAPPKKDDLWRLKTQEFIQDIPIPDLSEVTNFQRKIDVVQNE----------- 1932
Query: 1669 NREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCE 1728
L +IE A + R + ++VASL+++IPN L RT E
Sbjct: 1933 -------LDQIE---------------AEKKKRRKEKDIIVVASLLEKIPNFGHLTRTSE 1970
Query: 1729 VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
+F S L I + IL ++ F+ ISVTAEKW+PI EV + FL KK G+ ++GLEQ
Sbjct: 1971 IFGVSSLVIPNKAILEEEGFKAISVTAEKWLPIQEVKEKDLMAFLILKKKLGYKIVGLEQ 2030
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
T+ S + FP K +L+LGREK GIP++ I +LD C+EIPQ G VRSLNVHVS I +
Sbjct: 2031 TSKSKMIQHQEFPDKCILLLGREKTGIPLEYIEILDECVEIPQFGQVRSLNVHVSAVICI 2090
Query: 1849 WEYTR 1853
WE+
Sbjct: 2091 WEFVN 2095
>gi|302847769|ref|XP_002955418.1| hypothetical protein VOLCADRAFT_65891 [Volvox carteri f. nagariensis]
gi|300259260|gb|EFJ43489.1| hypothetical protein VOLCADRAFT_65891 [Volvox carteri f. nagariensis]
Length = 162
Score = 184 bits (466), Expect = 5e-43, Method: Composition-based stats.
Identities = 88/150 (58%), Positives = 115/150 (76%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+LVASLID++PNLAGLARTCEV A L +AD D F +SVTAE+W+P+ EV
Sbjct: 2 LLVASLIDKLPNLAGLARTCEVMGAGRLVLADLAATRDPVFTSVSVTAEQWLPMEEVKPA 61
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
++ +LER+ EG++++GLEQTA S+ L Y +P K VLVLGREKEGIP +++ +LDA +
Sbjct: 62 ALLAWLERRAAEGYTLVGLEQTAQSVRLPDYRWPAKVVLVLGREKEGIPPEVLSLLDATL 121
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
EIPQ G++RSLNVHVSGAIAL+EY RQ +F
Sbjct: 122 EIPQRGIIRSLNVHVSGAIALYEYVRQMQF 151
>gi|407410207|gb|EKF32732.1| hypothetical protein MOQ_003416 [Trypanosoma cruzi marinkellei]
Length = 1734
Score = 184 bits (466), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 175/684 (25%), Positives = 316/684 (46%), Gaps = 74/684 (10%)
Query: 1194 IAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLT 1253
++ L +VL V EE+ LK + + L + S R++ LAA+ + L
Sbjct: 1098 VSVLAFNVLRCGVVEHEEL---------LKSHISRALLDEADSERSVYLAAVTVATEVLR 1148
Query: 1254 NP---WIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFI 1310
+P W LK L L+ +V ++ + E +E A TE LL PE
Sbjct: 1149 DPSTNW------PRLKDLLLHVAVLYNSGRDEEASEIMVAATEPLLLL---FPE------ 1193
Query: 1311 NTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
L + V S + I C D L LLD+ + E
Sbjct: 1194 --ALRVQYPPTVRLSSVGRALAISTILWCCHLRHDWATEISLELLDWNTTHAAVKHEPCM 1251
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDN-----DIVGQVTHFLHISLYRNNLPSVRQYLETFA 1425
S HR ++R WQ++C L +D+ I+G+V + L N+ SVR+ +E +A
Sbjct: 1252 PNSKPHRCRIRLWQLLCALLPMIDDAAAQQGILGRV---IKTCLPLTNMGSVRRLMELYA 1308
Query: 1426 ITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIV 1485
+ I + P+ L + DY++RPQ SYV I A+++L + + ++ L ++
Sbjct: 1309 LKILERQPAFYT-LLDAAMTDYNLRPQVCGSYVLIMAHMMLQQLRG-EVERVDGLFHVLL 1366
Query: 1486 PLL----TSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSD 1541
L TSH H LR + ++Q+ T + +P E+ F+ Y+A+ +
Sbjct: 1367 HRLFQQSTSHQHLLRVICHIGLHQI----HETCTKQGVKFLPTEEMVFD----YIARAPE 1418
Query: 1542 CTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVRED 1598
+ R + L ++ + TP +F + +E + E +P + E+ + FL D
Sbjct: 1419 HVKFREKHAEQL-FFNLAEACTPRQLFCIKRREGNNILMESIPAAAFER-MRFL-----D 1471
Query: 1599 LRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDS-----LLDF--QKKI 1651
+ ++ E L++ D E+ L+ +SF +P +D+ +
Sbjct: 1472 YEFRCLIGALS-PVEMLRVRVISDRFESRRILEPFQSFPYIPHTESHTTYCVDYTVEAMA 1530
Query: 1652 TLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVA 1711
L N +N+++ E ++ + D ++++ L R++ E RQ ++++
Sbjct: 1531 LLTTDNNNNNTNNKMVEGDENIQRKVTPWWNDLVYNE-LHPRAIRQE----KRQPLIVLS 1585
Query: 1712 SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH 1771
SL+ N+AGL R E+F + ++D + F + +AE W+P V ++
Sbjct: 1586 SLLQNPVNVAGLFRCGEIFTVEKIVVSDPAVFAHPHFVAAARSAELWMPWDAVMAKNLPE 1645
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
+L + +G++++G+EQTA S+ + Y FP++ ++LG E G+P +++ +LD C+EIPQ
Sbjct: 1646 YLGSLRQDGYTLIGIEQTAGSVSMASYSFPERAAILLGAEGHGVPAELLPLLDVCVEIPQ 1705
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQ 1855
G++RSLNVHV+GA+ ++EYTRQ
Sbjct: 1706 FGLIRSLNVHVTGALVMYEYTRQH 1729
>gi|432106220|gb|ELK32106.1| Putative methyltransferase TARBP1 [Myotis davidii]
Length = 1285
Score = 183 bits (465), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 114/152 (75%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+ NL GL RTCEVF A+ L + + DKQFQ +SV+AE+W+P+VEV
Sbjct: 1126 RLIVVASLIDKPTNLGGLCRTCEVFGAAALVVGSLQCVGDKQFQQLSVSAEQWLPLVEVK 1185
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L +K+ EG++V+G+EQTA S L QY FP++++L+LG E+EGIP ++I LD
Sbjct: 1186 PPQLAGYLRQKQAEGYTVIGVEQTARSTALTQYCFPERSLLLLGNEREGIPANLIQQLDV 1245
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
C+EIPQ G+ RSLNVHVSGA+ +WEY RQQ+
Sbjct: 1246 CVEIPQQGITRSLNVHVSGALLIWEYARQQQL 1277
>gi|66362096|ref|XP_628012.1| tRNA (Gm18) ribose methylase; trm3p; SpoU superfamily - SPOUT
methylase [Cryptosporidium parvum Iowa II]
gi|46227488|gb|EAK88423.1| tRNA (Gm18) ribose methylase; trm3p; SpoU superfamily - SPOUT
methylase [Cryptosporidium parvum Iowa II]
Length = 1808
Score = 183 bits (465), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 123/164 (75%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL 1750
+ RS + +R +++ SL+D++PN+AG+ RTCEVF+A+ L ++ +++D F+
Sbjct: 1637 EPRSRRSDNRLLNRSGLIVIGSLVDKVPNIAGITRTCEVFRANELLLSSKKVMNDPIFRQ 1696
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
ISVTAEKW+PI E+ IK +++RK+ EG+ + GLEQT++SI + +FP+K+VL+LG+
Sbjct: 1697 ISVTAEKWLPINELEPTKIKEYVQRKRMEGYKIFGLEQTSSSISIKGCVFPEKSVLILGK 1756
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
EKEGIP +I+ ++D CIEIPQ G++RSLNVHVS +I ++EYT Q
Sbjct: 1757 EKEGIPSEIVSIVDQCIEIPQYGIIRSLNVHVSASIFIYEYTTQ 1800
>gi|261335662|emb|CBH18656.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]
Length = 1716
Score = 183 bits (464), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 175/669 (26%), Positives = 307/669 (45%), Gaps = 88/669 (13%)
Query: 1222 LKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDE 1278
+K + + L + +S R +AA+ L+ L +P W+ LK L L+ +V +
Sbjct: 1096 VKTHIYRTLLDEAQSERAGYIAAVTLSTEVLRDPESNWL------RLKELLLHVAVLHNP 1149
Query: 1279 DFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAK 1338
E E AE A E +L P L + V S + I
Sbjct: 1150 SREEEGAEVLVAALEPLMLKAWP----------ESLRVQYPPTVRLSYVGRAMAISAILC 1199
Query: 1339 ECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIV 1398
C + L LL++ ++ + E S HR ++R WQ++C L V + V
Sbjct: 1200 CCFKKEEWAADVTLQLLEWNNSNPAVNHEPCMPNSKAHRSRMRLWQLLCALVPMVRSPTV 1259
Query: 1399 GQVTHFLHISLYR----NNLPSVRQYLETFAITI-------YLKFPSLVAEQLVPILRDY 1447
+ LH+ + + N+ SVR+ +E FA+ + Y + +A +Y
Sbjct: 1260 QR--DLLHVVVMKCLTLTNMGSVRRLMELFALQLLQRQPQLYWIIDNAMA--------NY 1309
Query: 1448 DMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVL 1507
+RPQ + SYVFI+A+VIL R L + P+ L+ + H L F Q +Q +
Sbjct: 1310 QLRPQVIGSYVFISAHVIL--------RELRGEVEPVDGLMDTLLHRL--FQQSTSHQHM 1359
Query: 1508 CKLFPTLDFGTSQKMPLEKSCF-----EDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSI 1562
+L + ++ + + E + Y+A + + R + L +D +
Sbjct: 1360 LRLVCHIGLNFIREASVARGIVFSANEESIFDYVANAPEHVKFRVQHAEQL-FFDVREAC 1418
Query: 1563 TPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGE 1619
TP +F + +E + +P E+ + F+ D + V+T ++ +++
Sbjct: 1419 TPRQLFCIQRREGNNILLVSIPAVAFER-MRFI-----DREVACLTGVLTPVDQ-IRVQV 1471
Query: 1620 DPDCAETLSDLDKEESFSQLPKDS-----LLDFQKK----ITLPKHENQDNSSSSFFGN- 1669
E L+ + F +P +D+ ++ +T H ++ SS + + N
Sbjct: 1472 LMQHFEASRVLEPLKEFPYIPHTKSTALFCVDYTREAVAVLTADTHISEGMSSVTGYENV 1531
Query: 1670 -REAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCE 1728
R+A +L+D+ L R+L E RQ +++ASL+ N+AGL R E
Sbjct: 1532 QRKATPWW-----SSQLYDE-LHPRALKTE-----RQPVIVIASLLQNPVNVAGLFRCGE 1580
Query: 1729 VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
VF + ++DA +L F + +++ W+P V V ++ +L + +G++++G+EQ
Sbjct: 1581 VFAVEKVVVSDAAVLEHPHFVAAARSSDLWLPWSAVQVKALSGYLSSLRQDGYTLVGIEQ 1640
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
TA S+P+ Y FPK+ V+VLG E GIP ++ +LD C+EIPQ G++RSLNVHV+G+I +
Sbjct: 1641 TAGSVPMSSYQFPKRAVIVLGAEGHGIPAQLLTVLDVCVEIPQYGLIRSLNVHVTGSIVM 1700
Query: 1849 WEYTRQQRF 1857
+EYTRQ R
Sbjct: 1701 YEYTRQHRM 1709
>gi|67605967|ref|XP_666721.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657764|gb|EAL36488.1| hypothetical protein Chro.10198 [Cryptosporidium hominis]
Length = 740
Score = 183 bits (464), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 123/164 (75%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL 1750
+ RS + +R +++ SL+D++PN+AG+ RTCEVF+A+ L ++ +++D F+
Sbjct: 569 EPRSRRSDNQLLNRSGLIVIGSLVDKVPNIAGITRTCEVFRANELLLSSKKVMNDPIFRQ 628
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
ISVTAEKW+PI E+ IK ++++K+ EG+ + GLEQT++SI + + FP+K+VL+LG+
Sbjct: 629 ISVTAEKWLPINELEPTKIKEYVQKKRMEGYKIFGLEQTSSSISIKECAFPEKSVLILGK 688
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
EKEGIP +I+ ++D CIEIPQ G++RSLNVHVS +I ++EYT Q
Sbjct: 689 EKEGIPSEIVSIVDQCIEIPQYGIIRSLNVHVSASIFIYEYTTQ 732
>gi|326673098|ref|XP_001921874.3| PREDICTED: probable methyltransferase TARBP1 [Danio rerio]
Length = 1083
Score = 183 bits (464), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 258/524 (49%), Gaps = 72/524 (13%)
Query: 1354 LLDFVVNDKDLARELYKKYS--AIHRRKVRAWQMICILSRFVDNDIVGQ-VTHFLHISLY 1410
+L + D ++++ + YS HR K RAWQ + +L + ++ V + V + + +
Sbjct: 604 VLRMLNKDAEISKSKVRYYSNSIQHRVKSRAWQTLLLLLHQLRDEFVSECVLSRVCEAGF 663
Query: 1411 RNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSY--VFIAANVILH- 1467
+N SV+ +E I + + PS + D++ ++ ++ V + NV+L
Sbjct: 664 SSNQASVKYLIEWTLILVLQRSPSHIQSLWNCFSLDHEKTKTSICTFLSVLVHLNVLLPK 723
Query: 1468 -ASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVL----CKLFPTLDFGTSQKM 1522
A KAVQ+R ++ + SH+ S+R + L + +V +F D G +
Sbjct: 724 LADKAVQWRRAVEV---SLQWCFSHNFSVRLYALLALKRVWELQDAHVFIEEDLGGLSTV 780
Query: 1523 PLEKSCFEDLKSYL-AKNSDCTRLRASMSGYLDAYDP--NLSI-TPAVIFVNRDKELEFE 1578
K+C E ++ N+ R + + P + SI T IF + E E
Sbjct: 781 V--KACLEQAEAMQNTGNAMKNWSRIQEHFFFSVFHPIRDYSIETIFQIFPRLSEMAEDE 838
Query: 1579 CVPTSLMEQVLNF-------LNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLD 1631
+P E ++F LN+ DL D + D + DL+
Sbjct: 839 WLPLWKFESFVDFPTNSALPLNNPGTDLSELQPGDWI-----------QQDKGKHQGDLE 887
Query: 1632 KEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQ 1691
EE ++++ QKKI+ K Q E+E EL + Q
Sbjct: 888 LEERWAEV--------QKKISPWKLSVQ--------------------EQEPEL---MAQ 916
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI 1751
R+L + + +S ++VASLID+ NL GL RTCE+F A L + ++DKQFQ +
Sbjct: 917 QRALRLGKLTSS---LLVVASLIDKPTNLGGLCRTCEIFGAKALVLDSLRHVNDKQFQAL 973
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
SV++E W+P++EV + FL+ KK EG+ V+G+EQT+NS L Y FP+K++L+LG E
Sbjct: 974 SVSSELWLPMMEVKPAELSDFLQLKKSEGYWVIGVEQTSNSQSLQDYTFPEKSLLLLGNE 1033
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EGIP +++ +LD C+EIPQ GV RSLNVHVS A+ +WEYTRQ
Sbjct: 1034 REGIPANVLQLLDVCVEIPQFGVTRSLNVHVSAALLVWEYTRQH 1077
>gi|410901507|ref|XP_003964237.1| PREDICTED: probable methyltransferase TARBP1-like [Takifugu rubripes]
Length = 1487
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 149/245 (60%), Gaps = 16/245 (6%)
Query: 1627 LSDLDKEESFSQLPKDSLLDFQKKITLP----KHENQDNSSSSFF----GNREAYKQLLE 1678
LSDL +E ++L+ F + +LP + +D+ + G + + E
Sbjct: 1230 LSDLADDEWIPPWKFENLVTFSENPSLPLRNPAPDLRDHQPGDWIQQDKGEQSKEDRWAE 1289
Query: 1679 IEKEDELFDQVLQARSLAME------TIRASRQQ--FVLVASLIDRIPNLAGLARTCEVF 1730
++K+ + LQ + ++ +R +Q V+VASLID+ NL GL RTCE+F
Sbjct: 1290 VQKKITPWKSGLQEQEAELQLGPQQRAVRLGKQHGALVVVASLIDKPTNLGGLCRTCEIF 1349
Query: 1731 KASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
AS L + + DK FQ +SV++E W+P++EV + FL+ KK+EG+ ++G+EQTA
Sbjct: 1350 GASALVLDSLRHVSDKHFQSLSVSSELWLPLMEVKPVQLTDFLQAKKNEGYCIVGVEQTA 1409
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
NS L Y FP+KT+L+LG E+EGIP +++ MLD C+EIPQ G++RSLNVHVS A+ +WE
Sbjct: 1410 NSQSLQHYQFPEKTLLLLGNEREGIPANLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWE 1469
Query: 1851 YTRQQ 1855
YTRQ
Sbjct: 1470 YTRQH 1474
Score = 43.5 bits (101), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 29/147 (19%)
Query: 354 DIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTAR 413
D R +FW ++ GL+ + + RK++L++LK L + E++G + ST+R
Sbjct: 161 DPRLSPQFWMMVQDGLMHRDSVSRKRALYLLKKCLAL-SEDEG--------VECPPSTSR 211
Query: 414 GMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNH 473
G W + L ++ WE F+L+ E LEE H+V N
Sbjct: 212 GEELLFRWTPHRRELL----------------REFWEDFVLVMETLEENQVHVVRPVLN- 254
Query: 474 QITLLLQFSLPHDNLPGSTGRAHQNWI 500
+I L+Q ++ N + G H +W+
Sbjct: 255 RIDALIQTTV---NDTSAQGLFHPSWL 278
>gi|330797178|ref|XP_003286639.1| hypothetical protein DICPUDRAFT_14626 [Dictyostelium purpureum]
gi|325083387|gb|EGC36841.1| hypothetical protein DICPUDRAFT_14626 [Dictyostelium purpureum]
Length = 1558
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 163/559 (29%), Positives = 282/559 (50%), Gaps = 87/559 (15%)
Query: 1336 SAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFV-- 1393
++ EC+ +++ L LL L +F + ++ Y ++S ++ K + W+ +C L+ +
Sbjct: 1036 TSNECKPFVETLILELLQL-NF---KSEFSKREYSQHSRTNKMKCKLWRTLCSLTHIIQF 1091
Query: 1394 --DN-DIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSL--VAEQLVPILRD-Y 1447
DN ++ ++++ + +L N +VR ++ F I I +K P++ ++LV + D
Sbjct: 1092 NQDNIELYEKISNLMWNTLELKNHSNVRYLIQLFIINILVKSPNIKETNQKLVTKMEDSI 1151
Query: 1448 DMRPQALSSYVFIAANVILHASKAVQFRHLE---DLLPPIVPLLTSHHHSLRGFTQLLVY 1504
+ Q +S + I++ + + Q + + +L ++P T HH++R +QL +Y
Sbjct: 1152 NSDYQISASLIIISSTFLYYLLNNYQDSYEQMVINLFKTLLPWSTDFHHAVRTTSQLAIY 1211
Query: 1505 QVLCKLFPTLD-FGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSIT 1563
++ K F L+ F S+ L KS F +YL N RLR +
Sbjct: 1212 TIINKKFKILEQFNESE---LIKSIF----NYLEINKIQKRLREKQT------------- 1251
Query: 1564 PAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDC 1623
+FV D L+ +L E +L+ N + + + K + ED D
Sbjct: 1252 ---LFVESDDPLK-----KTLAENILSD-NSIGNTGGDDEDDEGESNKQQQ----EDDDY 1298
Query: 1624 AETLSDLDKEESFSQLPKDSLLDFQKKIT----LPKHENQDNSSSSFFGNREAYKQLLEI 1679
+ LS +D + +P SLLD KK+ + NQ+ S++ K+ ++I
Sbjct: 1299 S-NLSVIDD----AIIPM-SLLDISKKLIKDFQVSFQNNQNQHSAAVPQPTTEQKEHIQI 1352
Query: 1680 -----EKEDELFDQVLQARSLAMETIRA---------------------SRQQFVLVASL 1713
+++DE+ D Q R + I RQ ++V +
Sbjct: 1353 NNSNDDEDDEILD--FQRRITPWQWINKLEEHHQINNTNNSNNNNNKKNKRQSMIIVGTF 1410
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFL 1773
I+ PNLAGL RTCE+F +AI + +L+D QFQ +SV+AEK VPI+E+ ++ +L
Sbjct: 1411 IENTPNLAGLIRTCEIFNVEEVAIPNLKLLNDPQFQRVSVSAEKLVPIIEITKPNLLDYL 1470
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
+ KK EG+S+LG+EQT+ S L + FP+K +L+LG+E+ GIP + + ++D C+EIPQLG
Sbjct: 1471 KLKKKEGYSILGVEQTSQSKNLSSFQFPEKCLLLLGQEQNGIPANYLTIVDYCVEIPQLG 1530
Query: 1834 VVRSLNVHVSGAIALWEYT 1852
+RSLNVHVS +I +WEYT
Sbjct: 1531 QIRSLNVHVSASIVIWEYT 1549
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 72/184 (39%), Gaps = 52/184 (28%)
Query: 347 SDRGEEFDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQ 406
+D G F+I ++W + L+D++ L RKQ++H+LK + VS
Sbjct: 288 NDEGT-FNIIKKVDYWNILFESLIDKDSLPRKQAIHLLK------------NTVSLPSML 334
Query: 407 GKNSTARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHL 466
K S +G W Q+QW F LYE +E +HL
Sbjct: 335 WKESLPKG------WE-----------------------QKQWNLFFSLYECFDETKSHL 365
Query: 467 VEAAWNHQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVR 526
W QI H+ + S R + K I+ W+ +L+ RGF H N ++
Sbjct: 366 FVPVW-VQI---------HNLINASNERDNFTHFKEPSSIYFWIRILYFRGFNHINVNIK 415
Query: 527 YMIM 530
++
Sbjct: 416 KRVI 419
>gi|74026148|ref|XP_829640.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70835026|gb|EAN80528.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1716
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 175/669 (26%), Positives = 306/669 (45%), Gaps = 88/669 (13%)
Query: 1222 LKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDE 1278
+K + + L + +S R +AA+ L+ L +P W+ LK L L+ +V +
Sbjct: 1096 VKTHIYRTLLDEAQSERAGYIAAVTLSTEVLRDPESNWL------RLKELLLHVAVLHNP 1149
Query: 1279 DFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAK 1338
E E AE A E +L P L + V S + I
Sbjct: 1150 SREEEGAEVLVAALEPLMLKAWP----------ESLRVQYPPTVRLSYVGRAMAISAILC 1199
Query: 1339 ECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIV 1398
C + L LL++ ++ + E S HR ++R WQ++C L V + V
Sbjct: 1200 CCFKKEEWAADVTLQLLEWNNSNPAVNHEPCMPNSKAHRSRMRLWQLLCALVPMVRSPTV 1259
Query: 1399 GQVTHFLHISLYR----NNLPSVRQYLETFAITI-------YLKFPSLVAEQLVPILRDY 1447
+ LH+ + + N+ SVR+ +E FA+ + Y + +A +Y
Sbjct: 1260 QR--DLLHVVVMKCLTLTNMGSVRRLMELFALQLLQRQPQLYWIIDNAMA--------NY 1309
Query: 1448 DMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVL 1507
+RPQ + SYVFI+A+VIL R L + P+ L+ + H L F Q +Q +
Sbjct: 1310 QLRPQVIGSYVFISAHVIL--------RELRGEVEPVDGLMDTLLHRL--FQQSTSHQHM 1359
Query: 1508 CKLFPTLDFGTSQKMPLEKSCF-----EDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSI 1562
+L + ++ + + E + Y+A + + R + L +D +
Sbjct: 1360 LRLVCHIGLNFIREASVARGIVFSANEESIFDYVANAPEHVKFRVQHAEQL-FFDVREAC 1418
Query: 1563 TPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGE 1619
TP +F + +E + +P E+ + F+ D + V+T ++ +++
Sbjct: 1419 TPRQLFCIQRREGNNILLVSIPAVAFER-MRFI-----DREVACLTGVLTPVDQ-IRVQV 1471
Query: 1620 DPDCAETLSDLDKEESFSQLPKDS-----LLDFQKK----ITLPKHENQDNSSSSFFGN- 1669
E L+ + F +P +D+ + +T H ++ SS + + N
Sbjct: 1472 LMQHFEASRVLEPLKEFPYIPHTKSTALFCVDYTPEAVAVLTADTHISEGMSSVTGYENV 1531
Query: 1670 -REAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCE 1728
R+A +L+D+ L R+L E RQ +++ASL+ N+AGL R E
Sbjct: 1532 QRKATPWW-----SSQLYDE-LHPRALKTE-----RQPVIVIASLLQNPVNVAGLFRCGE 1580
Query: 1729 VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
VF + ++DA +L F + +++ W+P V V ++ +L + +G++++G+EQ
Sbjct: 1581 VFAVEKVVVSDAAVLEHPHFVAAARSSDLWLPWSAVQVKALSGYLSSLRQDGYTLVGIEQ 1640
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
TA S+P+ Y FPK+ V+VLG E GIP ++ +LD C+EIPQ G++RSLNVHV+G+I +
Sbjct: 1641 TAGSVPMSSYQFPKRAVIVLGAEGHGIPAQLLTVLDVCVEIPQYGLIRSLNVHVTGSIVM 1700
Query: 1849 WEYTRQQRF 1857
+EYTRQ R
Sbjct: 1701 YEYTRQHRM 1709
>gi|340059785|emb|CCC54181.1| conserved hypothetical protein, fragment, partial [Trypanosoma vivax
Y486]
Length = 883
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 166/660 (25%), Positives = 298/660 (45%), Gaps = 84/660 (12%)
Query: 1230 LEEGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAELAE 1286
L++ ++S RT +A + L+ L NP W + + L LY +V ++ E E +E
Sbjct: 273 LQDESQSERTGYVAVVTLSAEVLRNPHTNW------PKFQGLLLYAAVLYNPSREEESSE 326
Query: 1287 NYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQDALDS 1346
+ E +LA P L + +V S +A I K C D
Sbjct: 327 VLVSVVEPMMLAHWP----------ASLRQQYPPSVRLSHVARALAISTVLKCCCLRGDW 376
Query: 1347 GKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMIC-ILSRFVDNDIVGQVTHFL 1405
LL++ ++ + E S H+ ++R WQ++C +L D +G + +
Sbjct: 377 AAAVSQQLLEWNLSHSTVKHEPCMPNSKTHQCRLRLWQLLCAVLPTVCDAATLGDLLKVV 436
Query: 1406 HI-SLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANV 1464
+L N+ SVR+ +E +A+ + + P+L L + Y++RPQ SYVFIAA+V
Sbjct: 437 VTRTLTLTNMGSVRRLMELYALMLLQRQPALYG-VLDSAMATYNLRPQVCGSYVFIAAHV 495
Query: 1465 ILHASKAVQFRHLEDLLPPIVPLL----TSHHHSLRGFTQ--LLVYQVLCKLFPTLDFGT 1518
+L + + ++ L P ++ L TSH H LR L + +C + + F
Sbjct: 496 VLQELRG-EVEQVDGLRPTLLHRLFQHSTSHQHMLRVICHIGLNFIREVC-VSRGIAFSP 553
Query: 1519 SQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE---L 1575
++M L+ Y+A + + R L +D + P +F +E +
Sbjct: 554 GEEMMLD---------YIAHAPEHIKFRKQYGSEL-FFDLREACAPRKLFCVYRREGNNI 603
Query: 1576 EFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEES 1635
+P + E++L+ ++ S+ V T+ +++ A+ + E+
Sbjct: 604 LTVSIPAAAFERMLHIYQEL-----CSLTASVTTLDLLRIQM-----VAQQIETRHVFEA 653
Query: 1636 FSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELF-------DQ 1688
F +LP L+ K DN + QL+ I E D+
Sbjct: 654 FKELP---LIPHAK----------DNELYCVDYTADGVVQLMAIANSAEKAGASSVSSDK 700
Query: 1689 VLQAR-----------SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
+Q + L ++ RQ ++++S + N+AGL R EVF + I
Sbjct: 701 NIQLKMTPWCGTQLYNELHPRANKSERQPVIVISSFLQNPVNIAGLFRCGEVFSVEKITI 760
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
++ ++ F + +AE+W+P V +I +L + +G++++G+EQTA S+ +
Sbjct: 761 SEPSVFEHPHFIAAARSAEQWLPWNAVQERAIPDYLSSLRQKGYTLIGIEQTAGSVSIAS 820
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Y FP++ ++LG E G+P ++ +LD C+EIPQ G++RSLNVHV+GAI ++EYT+Q R
Sbjct: 821 YKFPRRVAILLGAEGHGVPAHLLPLLDVCVEIPQFGLIRSLNVHVAGAIVMYEYTQQHRM 880
>gi|384252574|gb|EIE26050.1| Hiv-1 Rna binding protein 1, partial [Coccomyxa subellipsoidea C-169]
Length = 165
Score = 181 bits (459), Expect = 3e-42, Method: Composition-based stats.
Identities = 80/155 (51%), Positives = 119/155 (76%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+ RQ ++VASL+D+ PNLAGLARTCEVF+A+ L +AD +L D F +++TA++WVP+
Sbjct: 1 SERQGIIVVASLLDKAPNLAGLARTCEVFQAAALVMADLRVLKDAAFVGVAMTAQQWVPL 60
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
++V + +L K+ +G+ V+GLEQT S L + FP+++VLVLG+E GIP +++
Sbjct: 61 LQVAPRDLLPWLSNKRAQGYRVIGLEQTVESQALPHFEFPERSVLVLGKEGTGIPANLLQ 120
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+D C+EIPQLG++RSLNVHVSGA+A++EYTRQQ+
Sbjct: 121 AVDCCVEIPQLGLIRSLNVHVSGALAVYEYTRQQQ 155
>gi|47228934|emb|CAG09449.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1600
Score = 181 bits (458), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 116/158 (73%), Gaps = 2/158 (1%)
Query: 1700 IRASRQQ--FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
+R +Q V+VASLID+ NL GL RTCE+F AS L + + + DK FQ +SV++E
Sbjct: 1439 VRLGKQHGALVVVASLIDKPTNLGGLCRTCEIFGASVLVLDSLHHVRDKHFQSLSVSSEL 1498
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
W+P++EV + FL+ KK+EG+ ++G+EQTANS L Y FP+KT+L+LG E+EGIP
Sbjct: 1499 WLPLMEVKPVQLTEFLQVKKNEGYCIVGVEQTANSRSLQDYQFPEKTLLILGNEREGIPA 1558
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ MLD C+EIPQ G++RSLNVHVS A+ +WEYTRQ
Sbjct: 1559 NLLQMLDVCVEIPQQGIIRSLNVHVSAALLIWEYTRQH 1596
>gi|300175076|emb|CBK20387.2| unnamed protein product [Blastocystis hominis]
Length = 698
Score = 181 bits (458), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 222/488 (45%), Gaps = 75/488 (15%)
Query: 1379 KVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYL--KFPSLV 1436
+VR WQ +C+ SR + ++ + + NL VR Y E F + + +F
Sbjct: 166 RVRCWQALCVCSRGLTKELAALCFPRFLRCIQQLNLRDVRHYEELFGMQLLKSERFSESS 225
Query: 1437 AEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLR 1496
+ L+ +LR Q + S + IA + S + L P + R
Sbjct: 226 YDALLSLLRIPSQSGQTVPSLLQIAVFPLFSVS--TDSPSIGAFLDAAFPWSMAPEGLTR 283
Query: 1497 GFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAY 1556
+Q+L + VL + KMP ++ LK LA N +R + +
Sbjct: 284 TVSQVLCFHVLERF----------KMPQ----YDWLKRMLAGNPRIAAMRRKQAALCEER 329
Query: 1557 DPNLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDV-----REDLRYSMAKDVVTIK 1611
+ + + +F L + +P LM+QV + ++ RED + A+ +
Sbjct: 330 NVDRECSTVSLFSLPLNNLN-DFIPAVLMDQVREEMENLLASWYREDFPPTTAES----R 384
Query: 1612 NESLKIGEDPDC--AETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGN 1669
+ K G P+ +E S E FS +FQKKI LP + SS S +
Sbjct: 385 ETTPKSGTYPELQNSEQFSTFQNSEQFS--------NFQKKI-LP----WEASSKSEVEH 431
Query: 1670 REAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEV 1729
R+ +Q+ V++ASL+D++PNL GL RT E+
Sbjct: 432 RK--------------------------------KQKIVVIASLVDKLPNLGGLTRTGEI 459
Query: 1730 FKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQT 1789
F + + ++ F+ SVTAE+WV + E P + + +L R K EG++++GLEQT
Sbjct: 460 FAVEKIVVNSLRCKKEQVFKSTSVTAEEWVEMEECPESELPAYLRRLKEEGYALVGLEQT 519
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
S L + FP+K LVLG+EKEGIP II MLD CIEIPQ G++RSLNVHVSG+I +W
Sbjct: 520 VTSKTLGKVEFPEKMALVLGKEKEGIPAKIIQMLDLCIEIPQFGIIRSLNVHVSGSILIW 579
Query: 1850 EYTRQQRF 1857
EY F
Sbjct: 580 EYISLNSF 587
>gi|221485609|gb|EEE23890.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2905
Score = 181 bits (458), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 130/208 (62%), Gaps = 15/208 (7%)
Query: 1648 QKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQF 1707
Q+K +H+ D G++E L + E E + L+ R
Sbjct: 2709 QRKFVPQQHQRSDEEK----GSQELLSSWLFVGGEGETLQRELRQRG-----------DL 2753
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
V+VASLID++PNLAGLARTCEVF A L I + +IL D QF I V+A +W+PI +V +
Sbjct: 2754 VVVASLIDKVPNLAGLARTCEVFDAKKLVIHNLDILSDPQFNTIGVSAHRWLPIEQVSAD 2813
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+ +L K +G++V+G+EQT +S L+ F +KT LVLG EKEG+P ++ ++DACI
Sbjct: 2814 DVARYLLDLKTQGYTVVGVEQTGSSQMLENARFDRKTALVLGAEKEGLPAALLALMDACI 2873
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EIPQLG++RSLNVHV+ A+ +WEYT+Q
Sbjct: 2874 EIPQLGLIRSLNVHVTAAMVVWEYTKQH 2901
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 1376 HRRKVRAWQMICILS---RFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
HR +R WQ + L+ R + Q+ L ++ L VR Y++ A+ + L
Sbjct: 2281 HRILLRGWQALSSLAPYFRAAPFAFLCQLHKLLWKAVAAPQLADVRHYIDLLAVQMLLFA 2340
Query: 1433 PSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHA------SKAVQFRHLED------- 1479
P+ LV IL+ ++ Q L + IA +LH ++ Q H +D
Sbjct: 2341 PAQSCPPLVAILQTFNSPTQTLIGALTIAGFFLLHPESRGMEAETPQRGHPQDREEEHRV 2400
Query: 1480 ---LLPPIVPLLTSHHHSLRGFTQLLVYQVLCK-LFP-TLDFGT 1518
L IVP LTS+ RG +Q +VY+ L K L P T D GT
Sbjct: 2401 KQVLFAAIVPYLTSNAAYPRGVSQYIVYEFLRKHLKPQTTDRGT 2444
Score = 44.3 bits (103), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 360 EFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTARGMTKRD 419
E W + GLVD L RK++ +L+ + ++ + + R G+ + R ++ D
Sbjct: 716 ERWRWLFEGLVDATPLNRKRARALLERLQATEQQSFLRALRATRRKAGRGESGRMVSGGD 775
Query: 420 -----LWAVKEAKSLGVG-KLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNH 473
L +E ++ + C + A + G W+AF+ L E LE++S HLV+ W+H
Sbjct: 776 DAGANLRGEEELRAFAAELERCGVSPEAQETG---WQAFVQLLEALEDFSQHLVKQQWSH 832
Query: 474 ---------QITLLLQFSLPH 485
++L LQ P
Sbjct: 833 MRRLCALTANVSLHLQLGRPR 853
>gi|221503013|gb|EEE28723.1| RNA methylase, putative [Toxoplasma gondii VEG]
Length = 2898
Score = 180 bits (457), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 130/208 (62%), Gaps = 15/208 (7%)
Query: 1648 QKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQF 1707
Q+K +H+ D G++E L + E E + L+ R
Sbjct: 2702 QRKFVPQQHQRSDEEK----GSQELLSSWLFVGGEGETLQRELRQRG-----------DL 2746
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
V+VASLID++PNLAGLARTCEVF A L I + +IL D QF I V+A +W+PI +V +
Sbjct: 2747 VVVASLIDKVPNLAGLARTCEVFDAKKLVIHNLDILSDPQFNTIGVSAHRWLPIEQVSAD 2806
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+ +L K +G++V+G+EQT +S L+ F +KT LVLG EKEG+P ++ ++DACI
Sbjct: 2807 DVARYLLDLKTQGYTVVGVEQTGSSQMLENARFDRKTALVLGAEKEGLPAALLALMDACI 2866
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EIPQLG++RSLNVHV+ A+ +WEYT+Q
Sbjct: 2867 EIPQLGLIRSLNVHVTAAMVVWEYTKQH 2894
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 1353 GLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILS---RFVDNDIVGQVTHFLHISL 1409
GL + N+ L S HR +R WQ + L+ R + Q+ L ++
Sbjct: 2251 GLPVYSKNETVQGHYLPMPNSCHHRILLRGWQALSSLAPYFRAAPFAFLCQLHKLLWKAV 2310
Query: 1410 YRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHA- 1468
L VR Y++ A+ + L P+ LV IL+ ++ Q L + IA +LH
Sbjct: 2311 AAPQLADVRHYIDLLAVQMLLFAPAQSCPPLVAILQTFNSPTQTLIGALTIAGFFLLHPE 2370
Query: 1469 -----SKAVQFRHLED----------LLPPIVPLLTSHHHSLRGFTQLLVYQVLCK-LFP 1512
++ Q H +D L IVP LTS+ RG +Q +VY+ L K L P
Sbjct: 2371 SRGMEAETQQRGHPQDREEEHRVKQVLFAAIVPYLTSNAAYPRGVSQYIVYEFLRKHLKP 2430
Query: 1513 -TLDFGT 1518
T D GT
Sbjct: 2431 QTTDRGT 2437
Score = 43.9 bits (102), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 34/149 (22%)
Query: 360 EFWEEIKRGLVDEEGLVRKQS---LHILKAVLQI----------RGENQGHSGVSDMRSQ 406
E W + GLVD L RK++ L L+A Q R +G SG M S
Sbjct: 709 ERWRWLFEGLVDATPLNRKRARALLERLQATEQQSFLRALRATRRKAGRGESG--RMVSG 766
Query: 407 GKNSTARGMTKRDLWA-VKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTH 465
G ++ A + +L A E + GV T W+AF+ L E LE++S H
Sbjct: 767 GDDAGANLRGEEELRAFAAELERCGVSPEAQETG---------WQAFVQLLEALEDFSQH 817
Query: 466 LVEAAWNH---------QITLLLQFSLPH 485
LV+ W+H ++L LQ P
Sbjct: 818 LVKQQWSHMRRLCALTANVSLHLQLGRPR 846
>gi|255070677|ref|XP_002507420.1| RNA methyltransferase [Micromonas sp. RCC299]
gi|226522695|gb|ACO68678.1| RNA methyltransferase [Micromonas sp. RCC299]
Length = 2006
Score = 180 bits (456), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADA-NILHDKQFQLISVTAEKWVPIVEVP 1765
V+VASL+D+IPNLAGLARTCEV A L IADA + + F +SVTAE+W+PI +VP
Sbjct: 1857 LVVVASLVDKIPNLAGLARTCEVLGAEALVIADAARTVSHRDFTAVSVTAERWLPIRDVP 1916
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
VN + +L R + +G++++GLEQT ++ +++Y FP+KT LVLGRE+EGI D++++LDA
Sbjct: 1917 VNGLVSYLLRLRRDGYALVGLEQTRGAVDVNEYRFPRKTALVLGREREGIDADVLNVLDA 1976
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+ IPQ G++RSLNVHVS ++A+ Y R
Sbjct: 1977 CVVIPQKGMIRSLNVHVSASVAMAAYARAH 2006
Score = 85.1 bits (209), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 124/562 (22%), Positives = 188/562 (33%), Gaps = 171/562 (30%)
Query: 1220 GPLKWFVEKVLEEGTKS--PRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFD 1277
G WFV K + G+K+ R +R+ + L + P KYY E+ L L G F
Sbjct: 1164 GACAWFVRKAIAAGSKTGGARILRVVSHALAARLVRWPCHSKYYANEVWALGLCGEGGFT 1223
Query: 1278 EDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA--RVSVAVLFSKLAD------ 1329
+AE++ A+ V K + +NT +Y R LAD
Sbjct: 1224 RAETLAMAEHWRAREAVKA-NKEKEKDGDTGAMNTGIYGVDRSRAGGDAGALADWLEDGG 1282
Query: 1330 -------------------------------QTEIVGSAKECQDALDSG--------KLF 1350
E V KE + G L
Sbjct: 1283 RGGAAGGHVAARVAALSLAHALALGEPPSAAAGEGVSGRKEFLSGTEYGVGALEGAAALL 1342
Query: 1351 LLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDN----DIVGQVTHFL- 1405
+GL D DLAR Y++ S+ HRRKVRAWQM+C L+ +D G+V L
Sbjct: 1343 RVGLDAVSGGDSDLARGTYRRGSSTHRRKVRAWQMLCALAPALDRLRRVSSAGKVRRLLE 1402
Query: 1406 --HI--SLYRNN------------LPS--------------------------------- 1416
HI SL +N LP+
Sbjct: 1403 KSHIFQSLSKNPGFVQKLGLGQELLPANPTLNESNESNESNAADRLAGSIETALKKAAPA 1462
Query: 1417 ---------VRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILH 1467
VR Y E F +P +V + +P LR D++P +S++ +AA ++
Sbjct: 1463 AVATHNLPGVRYYAEVFFTLAARSYPCVVTDVAIPALRSPDVKPLQAASWILVAAGRVVR 1522
Query: 1468 ASKAVQFRHLED-------LLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTS- 1519
K R + L + P +H+HSLR F QL + +L FG
Sbjct: 1523 DKKLTDHRDATNGLTLARQTLAAVAPWSLAHNHSLRVFAQLATHAMLDA------FGVDA 1576
Query: 1520 -QKMPLEKSC---------------------------------FEDLKSYLAKNSDCTRL 1545
+ PL + + S L+ NS+ ++
Sbjct: 1577 FEANPLTGTTGGNPSLSPSPSPSPSPSPGADSSSQSPSPAQSVLGSIASLLSTNSEMVKV 1636
Query: 1546 RASMSGYLDAYDPNLSITPAVIFVNR-------DKELEFECVPTSLMEQVLNFLNDVRED 1598
R + DA+ L P + + FE PTS + V FL RE
Sbjct: 1637 RVACGPVFDAH---LPCAPKDLLAGALDCERTGPDDPGFEGAPTSALASVEEFLRSSREG 1693
Query: 1599 LRYSMAKDVVTIKNESLKIGED 1620
LR + + + +++++ G D
Sbjct: 1694 LRRTRTAEDAWLWSDAMRAGCD 1715
>gi|237842689|ref|XP_002370642.1| RNA methyltransferase, TrmH family domain-containing protein
[Toxoplasma gondii ME49]
gi|211968306|gb|EEB03502.1| RNA methyltransferase, TrmH family domain-containing protein
[Toxoplasma gondii ME49]
Length = 2899
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 129/208 (62%), Gaps = 15/208 (7%)
Query: 1648 QKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQF 1707
Q+K +H D G++E L + E E + L+ R
Sbjct: 2703 QRKFVPQQHHRSDEEK----GSQELLSSWLFVGGEGETLQRELRQRG-----------DL 2747
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
V+VASLID++PNLAGLARTCEVF A L I + +IL D QF I V+A +W+PI +V +
Sbjct: 2748 VVVASLIDKVPNLAGLARTCEVFDAKKLVIHNLDILSDPQFNTIGVSAHRWLPIEQVSAD 2807
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+ +L K +G++V+G+EQT +S L+ F +KT LVLG EKEG+P ++ ++DACI
Sbjct: 2808 DVARYLLDLKTQGYTVVGVEQTGSSQMLENARFDRKTALVLGAEKEGLPAALLALMDACI 2867
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EIPQLG++RSLNVHV+ A+ +WEYT+Q
Sbjct: 2868 EIPQLGLIRSLNVHVTAAMVVWEYTKQH 2895
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 1353 GLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILS---RFVDNDIVGQVTHFLHISL 1409
GL + N+ L S HR +R WQ + L+ R + Q+ L ++
Sbjct: 2252 GLPVYSKNETVQGHYLPMPNSCHHRILLRGWQALSSLAPYFRAAPFAFLCQLHKLLWKAV 2311
Query: 1410 YRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHA- 1468
L VR Y++ A+ + L P+ LV IL+ ++ Q L + IA +LH
Sbjct: 2312 AAPQLADVRHYIDLLAVQMLLFAPAQSCPPLVAILQTFNSPTQTLIGALTIAGFFLLHPE 2371
Query: 1469 -----SKAVQFRHLED----------LLPPIVPLLTSHHHSLRGFTQLLVYQVLCK-LFP 1512
++ Q H +D L IVP LTS+ RG +Q +VY+ L K L P
Sbjct: 2372 SRGMEAETQQRGHPQDREEEHRVKQVLFAAIVPYLTSNAAYPRGVSQYIVYEFLRKHLKP 2431
Query: 1513 -TLDFGT 1518
T D GT
Sbjct: 2432 QTTDRGT 2438
Score = 43.9 bits (102), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 34/149 (22%)
Query: 360 EFWEEIKRGLVDEEGLVRKQS---LHILKAVLQI----------RGENQGHSGVSDMRSQ 406
E W + GLVD L RK++ L L+A Q R +G SG M S
Sbjct: 709 ERWRWLFEGLVDAAPLNRKRARALLERLQATEQQSFLRALRATRRKAGRGESG--RMVSG 766
Query: 407 GKNSTARGMTKRDLWA-VKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTH 465
G ++ A + +L A E + GV T W+AF+ L E LE++S H
Sbjct: 767 GDDAGANLRGEEELRAFAAELERCGVSPEAQETG---------WQAFVQLLEALEDFSQH 817
Query: 466 LVEAAWNH---------QITLLLQFSLPH 485
LV+ W+H ++L LQ P
Sbjct: 818 LVKQQWSHMRRLCALTANVSLHLQLGRPR 846
>gi|350415073|ref|XP_003490524.1| PREDICTED: hypothetical protein LOC100745300 [Bombus impatiens]
Length = 1499
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 231/495 (46%), Gaps = 43/495 (8%)
Query: 1369 YKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFL-HISLYRNNLPSVRQYLETFAIT 1427
Y +S IH+ K R Q + I+ + D + FL ++ L +N SVR E I
Sbjct: 1037 YFNHSYIHKIKHRIMQTLLIIQPILTKDNTVILQEFLCNLILLESNQHSVRIMQEWILIK 1096
Query: 1428 IYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPL 1487
I+++ + + RP +SS + I +V K Q + L I
Sbjct: 1097 IFVENIEFHDKIWEFFEKGIKTRPGCVSSIMCIIYHVSKLLPKDSQSNFILTALNYITRC 1156
Query: 1488 LTSHHHSLRGFTQLL---VYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTR 1544
+S+R + Q++ +Y++L ++ D T Q L + LK LA+NS+
Sbjct: 1157 CLGQQYSMRLYAQIIFVKLYKILEEM--NFDHATLQYRGLYNAAIATLKDGLARNSN--- 1211
Query: 1545 LRASMSGYLDAYDPNLSITPAVIFVNRDKELEF---ECVPTSLMEQVLNFLNDVREDLR- 1600
+ YL + P L+ T I+ + + E + L + LNF L+
Sbjct: 1212 -KIQDDFYLSIFHPILNYTLQTIYYELPRLTDMDASEWINPHLFKN-LNFEEFNGHSLQL 1269
Query: 1601 YSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQD 1660
Y+ + K S I +E ++ + + L D QKKI P
Sbjct: 1270 YNRNTSLSDTKTSSFLIKS----SEKTGGIESFGKNGNVEFEELNDIQKKIN-PLMSTNL 1324
Query: 1661 NSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNL 1720
+ S F RE+ I ED L ++VA L+ R PNL
Sbjct: 1325 SHSDIFPTIRESISHK-RISDEDGL----------------------IVVACLVSRTPNL 1361
Query: 1721 AGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEG 1780
GLARTCE+F L IA+ N + DK+FQ +SV+AE W+ I E + +L KK G
Sbjct: 1362 GGLARTCEIFNVKELVIANMNQIKDKEFQNLSVSAEYWITITEAKPYELCKYLLNKKDMG 1421
Query: 1781 FSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNV 1840
+S++G+EQTANS L F KKT+LVLG EK+GIP ++I + D CIEIPQ+GV+RSLNV
Sbjct: 1422 WSLVGVEQTANSTNLLSMKFEKKTILVLGNEKDGIPANLIPLFDTCIEIPQVGVIRSLNV 1481
Query: 1841 HVSGAIALWEYTRQQ 1855
HVSGAI +W+Y +Q
Sbjct: 1482 HVSGAICIWQYAKQH 1496
>gi|290994023|ref|XP_002679632.1| predicted protein [Naegleria gruberi]
gi|284093249|gb|EFC46888.1| predicted protein [Naegleria gruberi]
Length = 209
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 133/198 (67%), Gaps = 9/198 (4%)
Query: 1657 ENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDR 1716
E+ DN++ +F + ++ EI+ E L RSL ++ RQ +++ASLID+
Sbjct: 16 EDDDNTTLNFQTKFVPWSEM-EIQNE-------LNPRSL-LQHKNGKRQSIIVIASLIDK 66
Query: 1717 IPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERK 1776
IPNLAGLARTCE+F A L + N++ ++F+ ISV+AE W+P+ P + +L +K
Sbjct: 67 IPNLAGLARTCEIFSAEKLVLPHMNVVEMEEFKSISVSAEHWIPVEACPPTELAQYLSQK 126
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+ EG++++GLEQT+ S+ L Y FP++ + LG EKEG+P +++ ++D C+EIPQLGV+R
Sbjct: 127 RQEGYTIVGLEQTSTSVMLPDYEFPERCCICLGNEKEGMPPELLSLMDTCVEIPQLGVLR 186
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNVHVS +I ++ YT Q
Sbjct: 187 SLNVHVSASIMIYRYTEQ 204
>gi|292620337|ref|XP_002664256.1| PREDICTED: probable methyltransferase TARBP1-like [Danio rerio]
Length = 241
Score = 179 bits (455), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 123/176 (69%), Gaps = 6/176 (3%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E+E EL Q R+L + + +S ++VASLID+ NL GL RTCE+F A L +
Sbjct: 66 EQEPELMAQ---QRALRLGKLTSS---LLVVASLIDKPTNLGGLCRTCEIFGAKALVLDS 119
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
++DKQFQ +SV++E W+P++EV + FL+ KK EG+ V+G+EQT+NS L Y
Sbjct: 120 LRHVNDKQFQALSVSSELWLPMMEVKPAELSDFLQLKKSEGYWVIGVEQTSNSQSLQDYT 179
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++L+LG E+EGIP +++ +LD C+EIPQ GV RSLNVHVS A+ +WEYTRQ
Sbjct: 180 FPEKSLLLLGNEREGIPANVLQLLDVCVEIPQFGVTRSLNVHVSAALLVWEYTRQH 235
>gi|156396442|ref|XP_001637402.1| predicted protein [Nematostella vectensis]
gi|156224514|gb|EDO45339.1| predicted protein [Nematostella vectensis]
Length = 171
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
Query: 1697 METIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
M IR+S + V+VASLI++ PNL GL RTCE+F A L + +++D F+ +SV++
Sbjct: 1 MIAIRSSTGGELVVVASLINKAPNLGGLCRTCEIFGAKRLVLGSNEVMNDPYFKGLSVSS 60
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
KWV I +V + ++L+ +H+G+S++G+EQTANS L + FP KT+L+LG EKEGI
Sbjct: 61 SKWVDIEQVRPAELNNYLDAMRHDGYSLIGVEQTANSKRLTDFTFPHKTLLLLGNEKEGI 120
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
PV++I LDAC+EIPQ+GV+RSLNVHVSGA+ +WEYT+Q
Sbjct: 121 PVELIQQLDACVEIPQVGVIRSLNVHVSGALLIWEYTKQ 159
>gi|307183316|gb|EFN70185.1| Probable methyltransferase TARBP1 [Camponotus floridanus]
Length = 325
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 119/163 (73%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
S+ + +++ ++ ++VAS I+R PNL G+ARTCE+F L IA+ + + DK+FQ +S
Sbjct: 155 ESMYQQDLQSHKEGLIVVASFINRPPNLGGIARTCEIFGVKALVIANLDYIKDKEFQCLS 214
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
V+AE+W+ I++V + ++ +L KK+ G+S++G EQTANSI L Q F KKT+LVLG EK
Sbjct: 215 VSAERWINILQVKPHELQKYLFEKKNAGWSLIGAEQTANSINLLQTKFEKKTILVLGNEK 274
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+GIP + I + D C+EIPQ+GV+RSLNVHV+ AI +W+Y Q
Sbjct: 275 DGIPANFIPLFDTCVEIPQVGVIRSLNVHVTAAICIWQYASQH 317
>gi|281211908|gb|EFA86070.1| tRNA/rRNA methyltransferase SpoU family protein [Polysphondylium
pallidum PN500]
Length = 1626
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 114/156 (73%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
IR RQQ ++V + I+ PN+AGL RT E+F A +AI + +L+D QFQ +SV A+KWV
Sbjct: 1466 IRPPRQQMIIVGTFIENTPNVAGLIRTSEIFNAEEVAIPNIKLLNDPQFQRVSVAADKWV 1525
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI EV ++ +L+ KK +G+S+LG+EQT+ S L + FP+K +L+LG+E+ GIP +
Sbjct: 1526 PITEVNRQNLTSYLKAKKAKGYSILGVEQTSQSKNLATFQFPQKCLLLLGQEQNGIPAEY 1585
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ ++D CIEIPQ GV RSLNVHVS +I +WEY++QQ
Sbjct: 1586 LELVDYCIEIPQFGVTRSLNVHVSASIVIWEYSQQQ 1621
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
Query: 351 EEFDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNS 410
+ F+I + EF++ + L+D + + RKQSLH+LK + +
Sbjct: 318 DTFNILSKSEFFDVLFISLIDTDNVPRKQSLHLLKTFISLPAS----------------- 360
Query: 411 TARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAA 470
C+ L +QW + +YE E +HL
Sbjct: 361 ------------------------CWQQLLPF--NPKQWTLYFSIYEAFNETKSHLFRPV 394
Query: 471 WNHQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIM 530
W+ LP + ST A + + S W+ VL RGF H NP +R ++
Sbjct: 395 WSQ---------LPR-LISASTSFASVSDYRQSSF---WILVLLHRGFTHINPNIRRRVI 441
Query: 531 QSFL 534
L
Sbjct: 442 VDLL 445
>gi|145507310|ref|XP_001439610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406805|emb|CAK72213.1| unnamed protein product [Paramecium tetraurelia]
Length = 1396
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 239/507 (47%), Gaps = 78/507 (15%)
Query: 1359 VNDKDLARELYKKYSAIHRRKVRAWQMICILSRFV-----------DNDIVGQVTHFLHI 1407
V+ KD + Y +Y+ R K+ WQ IC L + D + ++ +
Sbjct: 955 VSIKDRYKNAYMQYTKQFRMKLHVWQNICCLKFLLKPENYQKVFGDDKKYLVELEQLIWK 1014
Query: 1408 SLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILH 1467
+ N P RQY+E + +P + A +++ L D ++ FI+ +LH
Sbjct: 1015 AFDTLNNPQYRQYIELMMSFLIDNYPDIWAPRIIQTLSDPKLKVNIQIPTTFISCIFLLH 1074
Query: 1468 ASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKS 1527
Q + + + PL++S+ +R Q Q + K +K
Sbjct: 1075 NQ---QNKFSQKFFDKLFPLVSSNVAYIRSLCQTTCLQYIKK---------------QKL 1116
Query: 1528 CFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEFECVPTSLMEQ 1587
++D Y N +C ++ ++ ++ Y+ + + T ++
Sbjct: 1117 EYKDFIEYFESNRECQKIIKNIGALIERYE--------------------KLMVTFDLDG 1156
Query: 1588 VLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDF 1647
+L D ++ + ++ +KN C +T+++L E++ S+ P +
Sbjct: 1157 ILTIQFDTFGEIIHPSIIEI--LKN---------TCTQTIAELKSEDNMSENPPPPWFQY 1205
Query: 1648 QKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQF 1707
++ L S+ + +++ I + +LF + Q R + + I
Sbjct: 1206 VERQQL---------STQYSQQLNFQRKINLIMDQFDLF-KAYQPRQIVGDII------- 1248
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+VA+L+++IPN L RTCE+F L + + IL D+Q+Q +SV+AE+ +PI+E+ +
Sbjct: 1249 -VVATLLEKIPNFGHLTRTCEIFGCRELVLPNKKILQDEQYQAVSVSAEQHLPILEIKED 1307
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+ ++L+ K+ +G+ ++ LEQT+ S + + F KKTVLVLGREK G+P++ I ++D C+
Sbjct: 1308 HLMNYLQLKRLQGYQLVALEQTSQSKSIVNFKFDKKTVLVLGREKTGLPIEYIELMDNCV 1367
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
EIPQ GV+RSLNVH+S I +W+Y +Q
Sbjct: 1368 EIPQYGVIRSLNVHISAVICVWQYVQQ 1394
>gi|301095550|ref|XP_002896875.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262108625|gb|EEY66677.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 486
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLI 1751
R + + RQ ++ ASL+D++PNLAGLARTCE+F A L + + D F +
Sbjct: 311 RGATLNARQRPRQPLIMCASLVDKVPNLAGLARTCEIFNAQKLVVPSLRMTQQDVTFVNV 370
Query: 1752 SVTAEKWVPIVEVPV--NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
S TA KW+P+ EV + ++ L R K EG++++ +EQTA+S+ L Y P+K VLVLG
Sbjct: 371 SATAHKWMPLEEVRPQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLG 430
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
REKEGIPV+++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 431 REKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 476
Score = 54.7 bits (130), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 1413 NLPSVRQYLETFAITIYLKFPS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKA 1471
LPSVR Y+E F + + KFP+ + + L+P+L D ++ PQ +S + ++A ++
Sbjct: 65 QLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTK 121
Query: 1472 VQFRHLE----DLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLE 1525
+ L+ +LL ++P L + H G+T++L +L K+ P S K
Sbjct: 122 LDDNSLDVDCGELLETMLPWLNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPG 177
Query: 1526 KSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPN 1559
E YL+ N +C R+ + LD + P+
Sbjct: 178 LRFLEGTARYLSNNKECKRMLRRQARQLDEFHPD 211
>gi|391340609|ref|XP_003744631.1| PREDICTED: probable methyltransferase TARBP1-like [Metaseiulus
occidentalis]
Length = 174
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 114/154 (74%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R+S+ V+VASLIDRIPNL G++RTCEVFKAS L I + +L K+F +SV++ W+P
Sbjct: 15 RSSQSGLVVVASLIDRIPNLGGISRTCEVFKASELVIPNLKMLESKEFLNLSVSSHHWLP 74
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I V N ++ +L K G++++G+EQTA S+ L +Y FP K++L+LG E+ G+P +I
Sbjct: 75 IRAVSTNGLEAYLMEMKQAGYTLIGVEQTAKSVALGKYCFPLKSLLLLGHERGGLPAHLI 134
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
++DAC+EIPQ GV+RSLNVHVS AI +WEY RQ
Sbjct: 135 DLMDACVEIPQQGVIRSLNVHVSAAILIWEYRRQ 168
>gi|340370596|ref|XP_003383832.1| PREDICTED: probable methyltransferase TARBP1-like [Amphimedon
queenslandica]
Length = 1523
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 141/236 (59%), Gaps = 22/236 (9%)
Query: 1620 DPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEI 1679
D DC ++ + Q +DS D Q+KIT P + + S F + LL
Sbjct: 1307 DEDC-----EIIDRPNTQQKDEDSGSDIQRKIT-PWNSSTVTLYSELFPSSSVPPSLLPS 1360
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
++++ + VLVASLI++ PNL GL RTCE+F + L +
Sbjct: 1361 VQDEK----------------KKKDNGLVLVASLINKQPNLGGLCRTCEIFGVAELVLGS 1404
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+L +K+F+ +SVTAEKW+ I +V + + +L + +G++++G+EQTA+S ++ Y
Sbjct: 1405 TAVLEEKEFKSLSVTAEKWLKISQVKPSELSTYLLSMRRKGYTLVGVEQTAHSKQINNYQ 1464
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P KTVL+LG E+EGIPV++IH LD C+EIPQ GV+RSLNVHVSGAI +WEYT+Q
Sbjct: 1465 IPVKTVLLLGNEREGIPVELIHSLDECVEIPQFGVIRSLNVHVSGAIVVWEYTKQH 1520
>gi|71654093|ref|XP_815672.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880745|gb|EAN93821.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1735
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 175/692 (25%), Positives = 306/692 (44%), Gaps = 90/692 (13%)
Query: 1194 IAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLT 1253
++ L +VL V EE+ LK + + L + S R++ LAA+ + L
Sbjct: 1099 VSVLAFNVLRCGVVEHEEL---------LKSHISRALLDEADSERSVYLAAVTVATEVLR 1149
Query: 1254 NP---WIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFI 1310
+P W LK L L+ +V ++ + E +E A TE +L PE
Sbjct: 1150 DPSANW------PRLKDLLLHVAVLYNSGRDEEASEMMVAATEPLILL---FPE------ 1194
Query: 1311 NTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
L V S + I C D L LLD+ + E
Sbjct: 1195 --ALRVLYPPTVRLSAVGRALAISTILWCCHLRHDWATEISLELLDWNTTHAAVKHEPCM 1252
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDNDIVGQ--VTHFLHISLYRNNLPSVRQYLETFAITI 1428
S HR ++R WQ++C L +D+ Q + + L N+ SVR+ +E +A+ I
Sbjct: 1253 PNSRPHRCRIRLWQLLCALLPMLDDAAAQQSVLGRVIKTCLPLTNMGSVRRLMELYALKI 1312
Query: 1429 YLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLL 1488
+ P+L L + DY++RPQ SYV I A+++L + + ++ L ++ L
Sbjct: 1313 LERQPALYT-LLDAAMTDYNLRPQVCGSYVLIMAHMMLQQLRG-EVERVDGLFHVLLHRL 1370
Query: 1489 ----TSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTR 1544
TSH H LR + ++Q+ T + +P E+ F+ Y+A+ + +
Sbjct: 1371 FQQSTSHQHLLRVICHIGLHQI----HETCTKQGVKFLPTEEMVFD----YIARAPEHVK 1422
Query: 1545 LRASMSGYLDAYDPNLSITPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVR----- 1596
R + L ++ + TP +F + +E + E +P + +++ ++ R
Sbjct: 1423 FREKHAEEL-FFNLAEACTPRQLFCVKRREGNNILTESIPAAAFDRMRFLDHEFRCLIGA 1481
Query: 1597 ----EDLRYSMAKDVVTIKNESLKIGED----PDCAETLSDLD-----KEESFSQLPKDS 1643
E LR + D + ES +I E P T S E+ + L D+
Sbjct: 1482 LSPVEMLRVRIISD----RFESRRILEPFKSFPYIPHTESHTTYCVDYTAEAMALLTADN 1537
Query: 1644 LLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRAS 1703
+ + EN + ++ N Y +L R+L E
Sbjct: 1538 NNNNTNNRMIDGDENIQRKVTPWW-NGLVYNEL--------------HPRALKQE----K 1578
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
RQ ++++SL+ N+AGL R E+F + ++D + F + +AE W+P
Sbjct: 1579 RQPLIVLSSLLQNPVNVAGLFRCGEIFTVEKVVVSDQAVFAHPHFVAAARSAELWMPWEA 1638
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ +L + +G++++G+EQTA S+ + Y FP++ ++LG E G+P +++ +L
Sbjct: 1639 VMAKNLPEYLGSLRQDGYTLIGIEQTAGSVSMASYRFPERAAILLGAEGHGVPAELLPVL 1698
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D C+EIPQ G++RSLNVHV+GA+ ++EYTRQ
Sbjct: 1699 DVCVEIPQFGLIRSLNVHVTGALVMYEYTRQH 1730
>gi|407850537|gb|EKG04907.1| hypothetical protein TCSYLVIO_004027 [Trypanosoma cruzi]
Length = 1788
Score = 177 bits (448), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 171/684 (25%), Positives = 318/684 (46%), Gaps = 74/684 (10%)
Query: 1194 IAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLT 1253
++ L +VL V E++ K + + L + S R++ LAA+ + L
Sbjct: 1152 VSVLAFNVLRCGVVEHEDL---------FKSHISRALLDEADSERSVYLAAVTVATEVLR 1202
Query: 1254 NP---WIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFI 1310
+P W LK L L+ +V ++ + E +E A TE P+ L +
Sbjct: 1203 DPLANW------PRLKDLLLHVAVLYNSGRDEEASEMMVAATE-------PLILLFPEAL 1249
Query: 1311 NTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYK 1370
+ V ++ + LA T + C D L LLD+ + E
Sbjct: 1250 RVQYPPTVRLSAVGRALAISTILWC----CHLRNDWVTEISLELLDWNTTHAAVKHEPCM 1305
Query: 1371 KYSAIHRRKVRAWQMICILSRFVDN-----DIVGQVTHFLHISLYRNNLPSVRQYLETFA 1425
S HR ++R WQ++C L +D+ I+G+V + L N+ SVR+ +E +A
Sbjct: 1306 PNSRPHRCRIRLWQLLCALLPMLDDAAAQQSILGRV---IKTCLPLTNMGSVRRLMELYA 1362
Query: 1426 ITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIV 1485
+ I + P+L L + DY++RPQ SYV I A+++L + + ++ L ++
Sbjct: 1363 LKILERQPALYT-LLDAAMTDYNLRPQVCGSYVLIMAHMMLQQLRG-EVERVDGLFHVLL 1420
Query: 1486 PLL----TSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSD 1541
L TSH H LR + ++Q+ T + +P E+ F+ Y+A+ +
Sbjct: 1421 HRLFQQSTSHQHLLRVICHIGLHQI----HETCTKQGVKFLPTEEMVFD----YIARAPE 1472
Query: 1542 CTRLRASMSGYLDAYDPNLSITPAVIFVNRDKE---LEFECVPTSLMEQVLNFLNDVRED 1598
+ R + L ++ + TP +F + +E + E +P + ++ + FL+
Sbjct: 1473 HVKFREKHAEEL-FFNLAEACTPRQLFCVKRREGNNILTESIPAAAFDR-MRFLDHEFRC 1530
Query: 1599 LRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDS-----LLDFQKKIT- 1652
L +++ E L++ D E+ L+ +SF +P +D+ +
Sbjct: 1531 LIGALSP------VEMLRVRIISDRFESRRILEPFKSFPYIPHTESHTTYCVDYTAEAMA 1584
Query: 1653 -LPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVA 1711
L N + +++ E ++ + ++D+ L R+L E RQ ++++
Sbjct: 1585 LLTADNNNNKTNNRMIDGDENIQRKVAPWWNGLVYDE-LHPRALKQE----KRQPLIVLS 1639
Query: 1712 SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH 1771
SL+ N+AGL R E+F + ++D + F + +AE W+P V ++
Sbjct: 1640 SLLQNPVNVAGLFRCGEIFTIEKVVVSDQAVFAHPHFVAAARSAELWMPWDAVMAKNLPE 1699
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
+L + +G++++G+EQTA S+ + Y FP++ ++LG E G+P +++ +LD C+EIPQ
Sbjct: 1700 YLGSLRQDGYTLIGIEQTAGSVSIASYRFPERAAILLGAEGHGVPAELLPVLDVCVEIPQ 1759
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQ 1855
G++RSLNVHV+GA+ ++EYTRQ
Sbjct: 1760 FGLIRSLNVHVTGALVMYEYTRQH 1783
>gi|221060168|ref|XP_002260729.1| rRNA methylase [Plasmodium knowlesi strain H]
gi|193810803|emb|CAQ42701.1| rRNA methylase, putative [Plasmodium knowlesi strain H]
Length = 2247
Score = 175 bits (443), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 108/149 (72%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASLID+IPNLAGL RTCE+FK L + +ANI+ D QFQ IS TA KW+ I EV
Sbjct: 2097 LIVVASLIDKIPNLAGLCRTCEIFKVQKLILHNANIVKDFQFQKISSTANKWMNIGEVKK 2156
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
I +L K+ + +S++GLEQT S+PL+ + FP+KTVL+LG EKEG+P ++ L C
Sbjct: 2157 GEILKYLMDKRKKNYSIVGLEQTKCSVPLNNFTFPEKTVLILGDEKEGLPASVLLFLHHC 2216
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
IEIP G++RSLNVHVS AI ++EY RQ
Sbjct: 2217 IEIPGKGIIRSLNVHVSAAITIYEYFRQH 2245
>gi|156547687|ref|XP_001604773.1| PREDICTED: hypothetical protein LOC100121184 [Nasonia vitripennis]
Length = 1450
Score = 175 bits (443), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 240/512 (46%), Gaps = 88/512 (17%)
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISL-----YRNNLPSVRQYLETFAIT 1427
S +HR K R Q++ IL ++D Q T L+ +L Y ++ SVR E +
Sbjct: 998 SQLHRLKHRLMQILLILQPYLDQ----QSTVMLYQTLCDSIVYDSDQHSVRLMKEWLLVR 1053
Query: 1428 IYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPL 1487
IYL L+++ + + RP + SS + +I H S + H+ + + +
Sbjct: 1054 IYLSNRELLSDLWSFFEKICNERPGSASSII----GIIWHISLQLDRNHVSEFIKKALEK 1109
Query: 1488 L----TSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCT 1543
L +R F Q+ KL+ LD + + L S N
Sbjct: 1110 LGVCCMGQQFGIRLFGQVF----FIKLYELLDENSDLRQEYANFHKSVLASLNCGNFKKN 1165
Query: 1544 RLRASMSGYLDAYDPNLSITPAVIFVN----RDKELEFECVPTSLMEQVL------NFLN 1593
++ + ++P T I+ + +E + EQ+L NF
Sbjct: 1166 PIKIDEDFFYSTFNPKQHYTLETIYHQLPRLSNVSIEEWITKENFEEQLLLDNGTINF-- 1223
Query: 1594 DVRE--------DLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLL 1645
D++ + YS+ K NE+ K E+ +C+E ++D+
Sbjct: 1224 DIKNTDCSLNAASIPYSILKS-----NENCK-PEEVECSENITDM--------------- 1262
Query: 1646 DFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQ 1705
QKKIT +K +L E+E ++ + E ++Q
Sbjct: 1263 --QKKIT-------------------PWKAMLPNEEE---LSEIADLSNYRKEC--NNKQ 1296
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
V+VASLI++ NL G+ARTCE+F L +++ + DK+FQ++SV+A+KW+ I+EV
Sbjct: 1297 DIVVVASLIEKSQNLGGIARTCEIFGVKQLVVSNLKQIEDKEFQVLSVSADKWIKIIEVK 1356
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
S+ ++L K G++++G EQTANS+ L +PK+TVLVLG EK GIP +II +LD
Sbjct: 1357 SFSLANYLLELKDCGWTLIGAEQTANSVNLYDLKYPKQTVLVLGNEKNGIPANIIPLLDM 1416
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
C+EI Q GV+RSLNVHV+ AI +WEY +Q +F
Sbjct: 1417 CVEISQFGVIRSLNVHVTSAICIWEYVKQYQF 1448
>gi|383860784|ref|XP_003705869.1| PREDICTED: uncharacterized protein LOC100877407 [Megachile rotundata]
Length = 1356
Score = 174 bits (441), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 108/149 (72%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VA L++R PNL GLARTCE+F L IA+ N + DK+FQ +SV+AE W+ I EV
Sbjct: 1205 LIVVACLVNRAPNLGGLARTCEIFSVKELVIANLNQITDKEFQNLSVSAENWITITEVKP 1264
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ + FL +K G+S++GLEQT NS L F KKT+LVLG EK+GIP ++I + D C
Sbjct: 1265 HQLCKFLLDRKKMGWSLVGLEQTVNSTNLLNMKFKKKTILVLGNEKDGIPANLIPLFDTC 1324
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
IEIPQ G++RSLNVHVSGAI +W+Y++Q
Sbjct: 1325 IEIPQAGIIRSLNVHVSGAICIWQYSKQH 1353
>gi|321461680|gb|EFX72710.1| hypothetical protein DAPPUDRAFT_58639 [Daphnia pulex]
Length = 177
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + +++ASL+DR+PNL GL RTCEV ++ + +K F +SV+AEKW+
Sbjct: 16 KTTTNDLIVIASLVDRVPNLGGLCRTCEVLGVRDFVLSSLRVTEEKDFVSLSVSAEKWIN 75
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
++E+ + ++++ K EG++V+G EQTA+S PL+ + FPKK+ L+LG EKEGIPV++I
Sbjct: 76 VLEIKPFQLVEYVKQLKLEGYTVVGAEQTASSQPLNHFTFPKKSALILGHEKEGIPVELI 135
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+E+PQ G++RS+NVHV+GAI +WEY RQQ
Sbjct: 136 QHLDVCVEVPQEGIIRSMNVHVTGAIFIWEYARQQ 170
>gi|328875258|gb|EGG23623.1| TAR RNA loop binding protein [Dictyostelium fasciculatum]
Length = 1627
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 112/148 (75%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ SRQ ++VA+ +D+IPNLAG+ART E+F L +++ I+ + FQ ISV+AE+W+P
Sbjct: 1476 QRSRQSIIIVATFVDKIPNLAGIARTGEIFNIESLVVSNRRIMKEVMFQQISVSAERWLP 1535
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV ++ +L KK EG+S+LG+EQT+ S + ++ FP K VL+LG+EKEGIP + I
Sbjct: 1536 IEEVSEENLTDYLMSKKSEGYSLLGIEQTSTSNCITEFQFPNKCVLLLGKEKEGIPTEYI 1595
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
++LD CIEIPQLGV+RSLNVHVSG+I +
Sbjct: 1596 NLLDKCIEIPQLGVLRSLNVHVSGSIMI 1623
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 57/273 (20%)
Query: 354 DIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTAR 413
D+R FW+ + G +D +GL+RK+S +ILK ++++ E +G +
Sbjct: 322 DLRLNTIFWKHLINGFIDNDGLIRKRSGYILKRIIKLSIEREGLDDHLE----------- 370
Query: 414 GMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWNH 473
T+ W+ ++K L Q+ W+ + L+YE L E++ HL+ W
Sbjct: 371 -WTRYFNWSKSDSKEL----------------QKYWDLYFLIYETLGEFTLHLILPVWKE 413
Query: 474 QITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSF 533
L+++ +H+ K F+WL +L++R H NP V I
Sbjct: 414 IDALVIE--------------SHKGNKKALA--FEWLDILFQRTINHENPAV---IKAQC 454
Query: 534 LGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLHQY-A 592
+GI Y C +P+SF+ G + + P+ + +G+ S + +F Y
Sbjct: 455 IGIMNSPYIAC---LPQSFIFGTLINAIVTPILY-----RGITESAIHQAIMNFFTTYFN 506
Query: 593 SFLDTRKQIAFLSNLAS-VAKQQSFGRVGLMAL 624
S T+ + F+S L + +AK++ F L L
Sbjct: 507 SLTSTKAKSDFVSTLLTFLAKEERFKEFTLCIL 539
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 170/409 (41%), Gaps = 42/409 (10%)
Query: 1124 NDLVESLENAGEGS----LLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSS 1179
N+++ESL +A G+ + P+L S + L + ++ +L+ S+
Sbjct: 911 NEIIESLIDAVGGANVYFIKPILNSAHMLLPFVRQE-----FNKKGDYRVDVLSNLMESA 965
Query: 1180 WILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMME---NTPGPLKWFVEKVLEEGTKS 1236
W + N V + A + ++ S E + N LK + +L + +
Sbjct: 966 WA---AANDTNVTSMTAFVQFAFSPNLLSVEPSSWDDESLNHHTLLKHYYSILLGKSDGA 1022
Query: 1237 PRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSL 1296
+ L + T +W P I +Y E+ LYG + D+D+E YD +
Sbjct: 1023 VGLMNLLTMKTTLVWNEMPTIASHYKDEILQSILYGPIRKDDDWEQSDQSFYDPIVTFNS 1082
Query: 1297 LAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQ--DALDSG------- 1347
+ ++ N A+ V + K +VG+ + ALDS
Sbjct: 1083 FVFDF--SIDSSYENDRDEAKFGVGSIPLKDVFSRAVVGTFLKSMGAKALDSSLSNQSQY 1140
Query: 1348 ----KLFLLGLLDFVVNDKDLARELYKKYSAI-HRRKVRAWQMICILSRFVDNDIVGQVT 1402
F+L LL++ + K+ R + I HRR++R WQ + +LS +V +VT
Sbjct: 1141 KEFINSFILELLEYAFS-KEFQRSDRHLINTIPHRRRIRLWQALALLSPYVTPANEQEVT 1199
Query: 1403 HFLH-----ISLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSY 1457
F + L+ NLPS R+Y+ F I ++P + +P+L + ++R ++S
Sbjct: 1200 EFAQKLVDVMCLF--NLPSTRRYINIFIIRFITRYPQTIQSHFLPLLDEINLRGDIVTSV 1257
Query: 1458 VFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQV 1506
V A +IL+ Q + I+ L S+H S+RG + LV ++
Sbjct: 1258 VITAGTMILYLDDKEQ---CNKIFKKIMALCCSNHMSVRGASISLVLRL 1303
>gi|389585689|dbj|GAB68419.1| rRNA methylase [Plasmodium cynomolgi strain B]
Length = 2088
Score = 172 bits (436), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 189/390 (48%), Gaps = 74/390 (18%)
Query: 1480 LLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKN 1539
L+ IV L +SH +R Q Y F +K L F+ SY+ N
Sbjct: 1757 LITRIVALCSSHAALVRSIAQYTFYY----------FVKGRKEILVDPFFQCTYSYIKHN 1806
Query: 1540 SDCTRLRASMSGYLDAYDPN-----LSITPAVIFVNRDKELEFECVPTSLMEQVL----- 1589
DC R+R M + P + PA + + +F T+ VL
Sbjct: 1807 KDCKRIRKKMKAQFRHWTPTPFDDIRILLPACNYSYDYFDEDFNEENTNTFAHVLRNYEL 1866
Query: 1590 ----NFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLL 1645
+F++ VR+ ++ M+ + + DL+++ +Q K+
Sbjct: 1867 VSSYSFIDTVRKAVQQEMSAIMFNV------------------DLERQRREAQNRKN--- 1905
Query: 1646 DFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQ 1705
+QKK Q N+ R Y QL + + + +
Sbjct: 1906 -YQKKFDPISDIIQVNNEF-----RRTYHQLAKTK----------------------TNK 1937
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++VASLID+IPNLAGL RTCE+FKA L + +A+I+ D QFQ IS TA KW+ I E+
Sbjct: 1938 KLIVVASLIDKIPNLAGLCRTCEIFKAQKLLLHNADIVKDFQFQKISSTANKWMNIGELK 1997
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L KK + ++++GLEQT S+PL+++ FP++T+L+LG EKEG+P ++ L
Sbjct: 1998 KGELLKYLMNKKRK-YAIVGLEQTKCSVPLNRFAFPERTILILGDEKEGLPSSVLLFLHH 2056
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
CIEIP G++RSLNVHVS AI ++EY +Q
Sbjct: 2057 CIEIPGKGIIRSLNVHVSAAITIYEYFKQH 2086
>gi|307207954|gb|EFN85513.1| Probable methyltransferase TARBP1 [Harpegnathos saltator]
Length = 1333
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 111/151 (73%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
+ ++VASL+ R PNL G+ARTCE+F L IA+ + + DK FQ +SV+AEKW+ +++
Sbjct: 1179 HEGLIVVASLVSRPPNLGGIARTCEIFGVKSLVIANLDCVKDKDFQCLSVSAEKWINMIQ 1238
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ ++ +L KK G+S++G EQTANSI L + F KKT+LVLG EK+GIP + I +
Sbjct: 1239 VTLHELQQYLLEKKSAGWSIVGAEQTANSINLLEAKFEKKTILVLGNEKDGIPANFIPLF 1298
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ C+EIPQ+GV+RSLNVHV+ AI +W+Y Q
Sbjct: 1299 NTCVEIPQVGVIRSLNVHVAAAICIWQYASQ 1329
>gi|340503356|gb|EGR29953.1| hypothetical protein IMG5_145440 [Ichthyophthirius multifiliis]
Length = 1123
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 137/215 (63%), Gaps = 21/215 (9%)
Query: 1648 QKKITLPKHEN-----------QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLA 1696
Q + LPKHE+ Q+ S F N + +++ +IE E+ +F++
Sbjct: 31 QNEDILPKHEDIWKIISQDLIDQNKSKEKFNSNFQ--RKIDQIENENNIFEK-------- 80
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+T+ S+++ ++VASL++++PN+A L RT EVF S L I + I+ ++F+ +SVTAE
Sbjct: 81 QKTLINSQKEIIIVASLLEKVPNIAHLTRTGEVFGISQLIIPNKQIIQTEEFKNVSVTAE 140
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
KW+P++E+ + FL KKH+GF ++GLEQT+ S + + FP K +L+LG+EK GIP
Sbjct: 141 KWLPLMEIKEEDLLKFLYFKKHQGFMLIGLEQTSQSQFIQNFQFPNKCILLLGKEKTGIP 200
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
+ I +LD CIEIPQ G +RSLNVH+S I +WE+
Sbjct: 201 PEYIEILDMCIEIPQFGQIRSLNVHISAVICIWEF 235
>gi|301095558|ref|XP_002896879.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262108629|gb|EEY66681.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 199
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 111/152 (73%), Gaps = 3/152 (1%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVP 1765
++ ASL+D++PNLAGLARTCE+F A L + + + D F +S TA KW+P+ EV
Sbjct: 38 LIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVR 97
Query: 1766 V--NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ ++ L R K E ++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV+++ ++
Sbjct: 98 PQGDDLRRALVRWKREDYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLV 157
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 158 DVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 189
>gi|270001605|gb|EEZ98052.1| hypothetical protein TcasGA2_TC000457 [Tribolium castaneum]
Length = 1259
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 112/160 (70%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+ T + F+LV +LI++ NL GL+RTCEVF + + A I+ DK+F+ +S+++E
Sbjct: 1099 LSTSPSQENNFILVTTLIEKSTNLGGLSRTCEVFGIKQIVMRTAKIISDKEFKSLSMSSE 1158
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
V I+EV + F+ K +G+SV+G EQT+ S+ LD + F KKTVLVLG EKEGIP
Sbjct: 1159 NSVEILEVKPEDLASFILNMKAQGYSVVGAEQTSESVKLDAFRFDKKTVLVLGNEKEGIP 1218
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D+I +LD CIEIPQ G+VRSLNVHV+GAI +WEY +Q R
Sbjct: 1219 PDLIPLLDHCIEIPQFGLVRSLNVHVAGAIVIWEYCKQHR 1258
>gi|332023938|gb|EGI64156.1| Putative methyltransferase TARBP1 [Acromyrmex echinatior]
Length = 828
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 110/152 (72%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
+Q ++VAS +DR PNL G+ARTCE+F L +A+A+ + DK+FQ +SV+A+KW+ I++
Sbjct: 674 QQGLIVVASFVDRSPNLGGIARTCEIFGVKALVVANADCVKDKEFQYLSVSADKWLNILQ 733
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ FL +K+ G+S++G+EQT NS L F K+T+LVLG EK+GIP + I +
Sbjct: 734 VKPYELQKFLLDRKNTGWSLIGVEQTVNSTNLMTTTFEKRTILVLGNEKDGIPANFIPLF 793
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D C+EIPQ+GV RSLNVHV+ AI +W+Y Q
Sbjct: 794 DKCVEIPQVGVTRSLNVHVTAAICIWQYANQH 825
>gi|157874196|ref|XP_001685588.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68128660|emb|CAJ08792.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 2043
Score = 170 bits (431), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 188/743 (25%), Positives = 315/743 (42%), Gaps = 118/743 (15%)
Query: 1172 MWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLE 1231
MW +R R+ +AAL +VLHY +M + P +K + +VL+
Sbjct: 1351 MWEHMRE-------VGARQYTRLAALAFTVLHY---------VMPHHPDYVKEVLLRVLK 1394
Query: 1232 ----EGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAEL 1284
+ + R + AA+ + L +P W + L+ + LY +V F+ + + E
Sbjct: 1395 GEGKDAQTADRDVYFAAITASLQVLHDPANNWPV------LRDVVLYAAVLFNTNRDEEE 1448
Query: 1285 AENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKL--ADQTEIVGSAKECQD 1342
E+ A TE LL P L + T A V A+ + L + G A
Sbjct: 1449 NESTVAVTE-PLLWTWP-EALRLCYPPTTCMAGVGRAMAVATLLWCCYENVAGRAVP--- 1503
Query: 1343 ALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDND---IVG 1399
L LL + RE S HR ++R WQ++C L + +
Sbjct: 1504 -------LTLELLRMNTCHPVVTREPCMPNSRTHRTRMRLWQLLCALLPCLADQHSVTPA 1556
Query: 1400 QVTHFLHISLYR----NNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALS 1455
QV + ++ NN+ SVR+ +E +AI + + P+L L L Y +RPQ
Sbjct: 1557 QVEEVFRMLVFHCLTVNNMGSVRRLMELYAIRLVEQRPALYT-VLSEALDSYSLRPQVCG 1615
Query: 1456 SYVFIAANVILHASKAVQFRH---------------LEDLLPPIVPLLTSHHHSLRGFTQ 1500
SY+ IA +V+L +A L P I+ TS+ H LR +
Sbjct: 1616 SYILIACHVLLRQEEAGGADESAAAAAGDEALASGIFTSLFPRILQQSTSNQHLLRIISH 1675
Query: 1501 LLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNL 1560
+ ++ + C+ + +P + Y+ + R R L +D
Sbjct: 1676 IGLFNI-CRR----RLARGRPIP---PAVAAIYEYVLHAPEHVRFREKHESML-FFDTEA 1726
Query: 1561 SITPAVIFVNRDKELEF---ECVPTSLMEQ----------------------VLNFLNDV 1595
+ +P +F + KE E +P + E+ V ++ V
Sbjct: 1727 ASSPRSLFCVQRKEANTVLAEVLPAAAFERLRFVETEMCCMIGALYPMELLRVHDWCASV 1786
Query: 1596 REDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPK 1655
R R S+ K I + S ++ D +E + L +D +L+ +
Sbjct: 1787 RVQERVSVLKGFRGIPHTSTP-------SDYYVDYTREAT-ELLTRDPMLEASAAAATAR 1838
Query: 1656 HEN---QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVAS 1712
D +S + K++ E++++ L RSL R +Q ++V S
Sbjct: 1839 SAGVGAGDEASGADAATANVQKKVSSWWT-SEVYNE-LHPRSL-----RTQKQSIIVVGS 1891
Query: 1713 LIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHF 1772
L++ N+AGL R E+F + + + + F + +AE W+P EV + +
Sbjct: 1892 LLENPVNIAGLCRCGEIFAVESIVVPEKKVFEHPHFVAAARSAELWIPWEEVAPKDLPCY 1951
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQL 1832
LE + G+ V+G+EQTA S+PL+Q+ FP++ +VLG E +G+P +I +LD C+EIPQ
Sbjct: 1952 LEGLRRRGYVVVGIEQTAASVPLEQFSFPERCAVVLGAEGQGVPAPLIPLLDVCVEIPQY 2011
Query: 1833 GVVRSLNVHVSGAIALWEYTRQQ 1855
G++RSLNVHV+GAI ++EYTRQ
Sbjct: 2012 GLIRSLNVHVAGAITMYEYTRQH 2034
>gi|242022188|ref|XP_002431523.1| hypothetical protein Phum_PHUM534190 [Pediculus humanus corporis]
gi|212516817|gb|EEB18785.1| hypothetical protein Phum_PHUM534190 [Pediculus humanus corporis]
Length = 1475
Score = 167 bits (424), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 241/509 (47%), Gaps = 65/509 (12%)
Query: 1363 DLARELYK---KY---SAIHRRKVRAWQMICILSR--FVDNDIVGQVTHFLHISLYRNNL 1414
DL +E+ K +Y S IHR K R Q + IL F + +T +L+ SL N
Sbjct: 1006 DLEKEICKNKNRYFGDSLIHRIKHRLMQALLILETVVFPNKTAAYDLTKWLYDSLEEENA 1065
Query: 1415 -PSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQ 1473
PSV+ E I + + +P L+++ + ++ + + S + I+ H K +
Sbjct: 1066 QPSVKYLQEWLLIRLLINYPELLSDFWSHLDNYITLKTKGVCSLITISY----HLCKIIP 1121
Query: 1474 FRHLEDLL----PPIVPLLTSHHHSLRGFTQLLV--YQVLCKLFPTLDFGTSQKM---PL 1524
L D L I+P H +R + +++ Y +L K LD ++ +
Sbjct: 1122 SDRLRDWLNQGITKILPFTMDQHFEVRLYALVILEKYCLLAKDRKLLDIYDKYEIIHNSV 1181
Query: 1525 EKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVN--RDKELEF-ECVP 1581
++S K KN C +L+ YL+ ++P + IF + R + F E +
Sbjct: 1182 QRSIQRGCKGNAGKN--CRKLQEDF--YLNVFNPLEHYSLETIFNDLPRLANVGFDEWIS 1237
Query: 1582 TSLMEQVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAE-TLSDLDKEESFSQLP 1640
+ + +N+ + ++ ++N S ED CA ++S S+
Sbjct: 1238 LKIFKNCHPHINNNK----------IIPVENVSDSSLEDVSCATWSISSKCNPRECSEFN 1287
Query: 1641 KDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETI 1700
+D+ H N S ++ K+LL E +
Sbjct: 1288 EDN------------HNNNSQSKINYQKKMIPLKELLPTEDFSDC-------------PS 1322
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R ++VASLIDR+PNL GLARTCE+F + + DKQF +SVTAEKW+
Sbjct: 1323 RRVTDGLIVVASLIDRVPNLGGLARTCEIFGTFEYVLGSLKYVEDKQFASLSVTAEKWIN 1382
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV ++ ++L + K +G+ V+G EQ S PL++ FPKK++L+LG EKEGIP +++
Sbjct: 1383 IKEVRPENLLNYLLKMKDDGYKVIGAEQALYSKPLNEVKFPKKSLLLLGNEKEGIPPNLL 1442
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
+LD C+EIPQ+G++RSLNVHV+G + L+
Sbjct: 1443 PLLDICVEIPQVGIIRSLNVHVTGDVMLF 1471
>gi|198419564|ref|XP_002121605.1| PREDICTED: similar to TAR RNA binding protein 1 [Ciona intestinalis]
Length = 1848
Score = 167 bits (423), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 109/163 (66%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
+ + I+ VLVASLID+ NL GL RTCEVF A + + + DK FQ +S
Sbjct: 1676 KKIVTSDIKKKAGGLVLVASLIDKPSNLGGLTRTCEVFGAEQMIVHSLSCTSDKLFQSLS 1735
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
VTA KW+ + EV ++ +LE K +G++++ EQT S+ L +Y FP K V++LG EK
Sbjct: 1736 VTAHKWLKMSEVKRWELEEYLESMKRQGYALVATEQTEQSVCLTEYKFPPKCVILLGNEK 1795
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EGIP +++ M ACIEIPQ+GVVRSLNVHVSG I +WE+TRQ+
Sbjct: 1796 EGIPPNLLRMCSACIEIPQVGVVRSLNVHVSGGITVWEFTRQK 1838
>gi|301095548|ref|XP_002896874.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262108624|gb|EEY66676.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 709
Score = 166 bits (421), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 273/604 (45%), Gaps = 65/604 (10%)
Query: 1237 PRTIRLAALHLTGLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSL 1296
P + A L W +P ++ EL L LY DE + +LA + A +
Sbjct: 83 PNVVFHLACRLCQTWRAHPVSALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GF 139
Query: 1297 LAKSPVPELTEAFINTELYARVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLL 1355
SP+ A + T R V+ S + D + S+ + Q D+ LL L
Sbjct: 140 QGYSPLDGNQTAAVTTHAKDRFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL- 198
Query: 1356 DFVVNDKDLARELYKKY---SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRN 1412
++ E K++ S +K+R+WQ +CI+S V + ++ L +
Sbjct: 199 -------NVTPEWQKQHMLNSDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVP 251
Query: 1413 NLPSVRQYLETFAITIYLKFPS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKA 1471
LPSVR Y+E F + + KFP+ + + L+P+L D ++ PQ +S + ++A ++
Sbjct: 252 QLPSVRYYMELFGMRMAAKFPTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTK 308
Query: 1472 VQFRHLE----DLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKS 1527
+ L+ +LL ++P L + H R Q L+ +VL + L + L
Sbjct: 309 LDDNSLDVDCGELLETMLPWLNTSHGYSRVLAQYLLAKVLPRHIHYLKQSSKDTPGLR-- 366
Query: 1528 CFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNLSITPAVIFVNRDKELEF-ECVPTSLME 1586
E YL+ N +C R+ + LD + P+ + + ++ EF E +P +
Sbjct: 367 FLEGTARYLSNNKECKRMLRRQARQLDEFHPDYE-SSLLGMLSSGFISEFGELLPR---D 422
Query: 1587 QVLNFLNDVREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLD 1646
L F E L+ +M + + E+ P +E S ++ + L
Sbjct: 423 DALRF----SEQLKTAMNELYAQYQLENFP----PTPSEQKSSMEADSV------SGFLT 468
Query: 1647 FQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQ 1706
Q+KI +DN+ L + D FD R + + RQ
Sbjct: 469 VQRKIDTTALLLEDNA-------------LPAAMRAD--FDAA--RRGATLNARQRPRQP 511
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVP 1765
++ ASL+D++PNLAGLARTCE+F A L + + + D F +S TA KW+P+ EV
Sbjct: 512 LIMCASLVDKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVR 571
Query: 1766 V--NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV-DIIHM 1822
+ ++ L R K EG++++ +EQTA+S+ L Y P+K VLVLGREKEGIPV H+
Sbjct: 572 PQGDDLRRALVRWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVRSGCHL 631
Query: 1823 LDAC 1826
++ C
Sbjct: 632 VELC 635
>gi|398021058|ref|XP_003863692.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501925|emb|CBZ37008.1| hypothetical protein, conserved [Leishmania donovani]
Length = 2045
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 188/739 (25%), Positives = 316/739 (42%), Gaps = 110/739 (14%)
Query: 1172 MWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLE 1231
MW +R R+ +AAL +VLHY +M + P +K + +VL+
Sbjct: 1353 MWEHMRE-------VGARQYTRLAALAFTVLHY---------VMPHHPDYVKEALLRVLK 1396
Query: 1232 ----EGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAEL 1284
+ + R + AA+ + L NP W + L+ + LY +V F+ + + E
Sbjct: 1397 GEGKDAQTADRDVYFAAITASLQVLHNPANNWPV------LRDVVLYAAVFFNTNRDEEE 1450
Query: 1285 AENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKL--ADQTEIVGSAKECQD 1342
E+ A TE LL P L + + T A V A+ + L + G A
Sbjct: 1451 NESTVAVTE-PLLWTWP-EALRQCYPPTTCMAGVGRAMAVATLLWCCYENVAGRAVP--- 1505
Query: 1343 ALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDND---IVG 1399
+ LL + E S HR ++R WQ++C L +
Sbjct: 1506 -------LTMELLRMNTCHPLVTHEPCMPNSRTHRTRMRLWQLLCALLPCLAEQHSVPPA 1558
Query: 1400 QVTHFLHISLYR----NNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALS 1455
QV + ++ NN+ SVR+ +E +AI + + P+L L L + +RPQ
Sbjct: 1559 QVEEVFRMLVFHCLTVNNMGSVRRLMELYAIRLVEQRPALYT-VLSEALGSHSLRPQVCG 1617
Query: 1456 SYVFIAANVILHASKAVQFRH---------------LEDLLPPIVPLLTSHHHSLRGFTQ 1500
SY+ IA +V+L +A L P I+ TS+ H LR +
Sbjct: 1618 SYILIACHVLLRQEEAGGADESAAAAAGDEALASGIFASLFPRILQQSTSNQHLLRIISH 1677
Query: 1501 LLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNL 1560
+ ++ + C+ + +P + Y+ + RLR L +D
Sbjct: 1678 IGLFNI-CRR----RLARGRPVP---PAVAAIYEYVLHAPEHVRLREKHESML-FFDTEA 1728
Query: 1561 SITPAVIFVNRDKELEF---ECVPTSLMEQVLNFLND---VREDLRYSMAKDVVTIKNES 1614
+ +P +F + KE E +P + E+ L F+ Y M V S
Sbjct: 1729 ASSPRSLFCVQRKEANTVLAEVLPAAAFER-LRFVETEMCCMIGALYPMELLRVHDWCAS 1787
Query: 1615 LKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKIT--------LPKHENQDNSSSSF 1666
L++ E + + + P D +D+ ++ T L + S+
Sbjct: 1788 LRVQERVSVLKGFRGIPHTST----PSDYYVDYTREATELLTRDPMLEASAAAAIARSAA 1843
Query: 1667 FGNRE----AYKQLLEIEKE------DELFDQVLQARSLAMETIRASRQQFVLVASLIDR 1716
G + A ++K+ E++++ L R+L R +Q ++V SL++
Sbjct: 1844 VGAGDEASGADAATANVQKKVSSWWTSEVYNE-LHPRAL-----RTQKQSIIVVGSLLEN 1897
Query: 1717 IPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERK 1776
N+AGL R E+F L + + + F + +AE W+P EV + +LE
Sbjct: 1898 PVNIAGLCRCGEIFAIESLVVPEKKVFEHPHFVAAARSAELWIPWEEVMPKDLPGYLEGL 1957
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+ G+ V+G+EQTA S+PL+Q+ FP++ +VLG E +G+P +I +LD C+EIPQ G++R
Sbjct: 1958 RRRGYVVVGIEQTAASVPLEQFSFPERCAVVLGAEGQGVPAPLIPLLDVCVEIPQYGLIR 2017
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
SLNVHV+GAI ++EYTRQ
Sbjct: 2018 SLNVHVAGAITMYEYTRQH 2036
>gi|146096859|ref|XP_001467955.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072321|emb|CAM71027.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 2045
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 187/733 (25%), Positives = 311/733 (42%), Gaps = 98/733 (13%)
Query: 1172 MWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLE 1231
MW +R R+ +AAL +VLHY +M + P +K + +VL+
Sbjct: 1353 MWEHMRE-------VGARQYTRLAALAFTVLHY---------VMPHHPDYVKEALLRVLK 1396
Query: 1232 ----EGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAEL 1284
+ + R + AA+ + L NP W + L+ + LY +V F+ + + E
Sbjct: 1397 GEGKDAQTADRDVYFAAITASLQVLHNPANNWPV------LRDVVLYAAVFFNTNRDEEE 1450
Query: 1285 AENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKL--ADQTEIVGSAKECQD 1342
E+ A TE LL P L + + T A V A+ + L + G A
Sbjct: 1451 NESTVAVTE-PLLWTWP-EALRQCYPPTTCMAGVGRAMAVATLLWCCYENVAGRAVP--- 1505
Query: 1343 ALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDND---IVG 1399
+ LL + E S HR ++R WQ++C L +
Sbjct: 1506 -------LTMELLRMNTCHPLVTHEPCMPNSRTHRTRMRLWQLLCALLPCLAEQHSVPPA 1558
Query: 1400 QVTHFLHISLYR----NNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALS 1455
QV + ++ NN+ SVR+ +E +AI + + P+L L L + +RPQ
Sbjct: 1559 QVEEVFRMLVFHCLTVNNMGSVRRLMELYAIRLVEQRPALYT-VLSEALGSHSLRPQVCG 1617
Query: 1456 SYVFIAANVILHASKAVQFRH---------------LEDLLPPIVPLLTSHHHSLRGFTQ 1500
SY+ IA +V+L +A L P I+ TS+ H LR +
Sbjct: 1618 SYILIACHVLLRQEEAGGADESAAAAAGDEALASGIFASLFPRILQQSTSNQHLLRIISH 1677
Query: 1501 LLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDPNL 1560
+ ++ + C+ + +P + Y+ + RLR L +D
Sbjct: 1678 IGLFNI-CRR----RLARGRPVP---PAVAAIYEYVLHAPEHVRLREKHESML-FFDTEA 1728
Query: 1561 SITPAVIFVNRDKELEF---ECVPTSLMEQVLNFLND---VREDLRYSMAKDVVTIKNES 1614
+ +P +F + KE E +P + E+ L F+ Y M V S
Sbjct: 1729 ASSPRSLFCVQRKEANTVLAEVLPAAAFER-LRFVETEMCCMIGALYPMELLRVHDWCAS 1787
Query: 1615 LKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKIT--LPKHENQDNSSSSFFGNREA 1672
L++ E + + + P D +D+ ++ T L + + S+++ A
Sbjct: 1788 LRVQERVSVLKGFRGIPHTST----PSDYYVDYTREATELLTRDPMLEASAAAAIARPAA 1843
Query: 1673 YKQLLEIEKEDELFDQVLQARS----------LAMETIRASRQQFVLVASLIDRIPNLAG 1722
E D V + S L +R +Q ++V SL++ N+AG
Sbjct: 1844 VGAGDEASGADAATANVQKKVSSWWTSEVYNELHPRALRTQKQSIIVVGSLLENPVNIAG 1903
Query: 1723 LARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFS 1782
L R E+F L + + + F + +AE W+P EV + +LE + G+
Sbjct: 1904 LCRCGEIFAIESLVVPEKKVFEHPHFVAAARSAELWIPWEEVVPKDLPGYLEGLRRRGYV 1963
Query: 1783 VLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHV 1842
V+G+EQTA S+PL+Q+ FP++ +VLG E +G+P +I +LD C+EIPQ G++RSLNVHV
Sbjct: 1964 VVGIEQTAASVPLEQFSFPERCAVVLGAEGQGVPAPLIPLLDVCVEIPQYGLIRSLNVHV 2023
Query: 1843 SGAIALWEYTRQQ 1855
+GAI ++EYTRQ
Sbjct: 2024 AGAITMYEYTRQH 2036
>gi|196016798|ref|XP_002118249.1| hypothetical protein TRIADDRAFT_5097 [Trichoplax adhaerens]
gi|190579150|gb|EDV19252.1| hypothetical protein TRIADDRAFT_5097 [Trichoplax adhaerens]
Length = 187
Score = 166 bits (419), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
D+ L ++ L + ++ ++VASLID+ NL GL RTCE+ S L I++ N + ++
Sbjct: 18 DESLLSKQLTLSNGKSREDGLIVVASLIDKAANLGGLCRTCEILGVSRLVISNKNFIENR 77
Query: 1747 QFQLISVTAEKWVPI-VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
+FQ +SVTA KW+PI V V ++ +L K G+SV+G+EQTANS L +Y F K+++
Sbjct: 78 EFQSLSVTAHKWIPIDEVVRVEELEEYLISMKQLGYSVVGVEQTANSADLTKYDFAKRSI 137
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
L+LG E+EGIPV ++ M+D C+ IPQLG +RS NVHV+GA+ +WEY++Q
Sbjct: 138 LLLGNEREGIPVPLLKMVDECVAIPQLGTIRSFNVHVTGAVLIWEYSKQH 187
>gi|156101974|ref|XP_001616680.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805554|gb|EDL46953.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2316
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
+ ++ ++VASLID++PNLAGL RTCE FK L + +A+I+ D QFQ IS TA KW+ I
Sbjct: 2164 TNKKLIVVASLIDKVPNLAGLCRTCEFFKVQKLMLHNASIVKDFQFQKISSTANKWMNIG 2223
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
E+ I +L RKK + ++++GLEQT S+PL ++ FP++T+L+LG EKEG+P ++ +
Sbjct: 2224 ELKKGDILKYLMRKKKK-YAIVGLEQTKCSVPLKRFAFPERTILILGDEKEGLPSSVLLL 2282
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
L C+EIP G++RSLNVHVS A+ ++EY RQ
Sbjct: 2283 LHHCVEIPGKGIIRSLNVHVSAAVTIYEYCRQH 2315
>gi|313243076|emb|CBY39772.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 110/153 (71%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ S + V+ ASLID+ NL G+ RT EVF A LAI++ +IL K + ++VTA KW+
Sbjct: 73 KKSCEGLVICASLIDKANNLGGITRTAEVFGAESLAISNLSILKSKDYTSLAVTAMKWID 132
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV +++ +L K +G+ + GLEQT NSI ++++ FPKK V+VLG E+EGIP +II
Sbjct: 133 IQEVKAINLQKWLLSMKMKGYCLAGLEQTTNSISIEKFDFPKKCVVVLGNEREGIPTNII 192
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+LD +EIPQ G++RSLNVHVS AI++WEYTR
Sbjct: 193 SLLDVVLEIPQKGIIRSLNVHVSAAISIWEYTR 225
>gi|428165008|gb|EKX34015.1| hypothetical protein GUITHDRAFT_80893, partial [Guillardia theta
CCMP2712]
Length = 153
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 112/149 (75%), Gaps = 1/149 (0%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQLISVTAEKWVPIVEVP 1765
V+VASLI+++PNLAGLARTC +F+ L + D +L+D+ F+ ++V++EKW+ EV
Sbjct: 1 LVVVASLIEKMPNLAGLARTCAIFQTQALVVHDKKKMLNDQLFKQVAVSSEKWMNFQEVK 60
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ +L R + EG+S++GLEQ ++SI L ++ FP K +L+LG+EKEGIP ++H+LD
Sbjct: 61 DEELPAYLRRMRGEGWSIIGLEQASDSIALHKFEFPDKAILLLGKEKEGIPQPLLHLLDF 120
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
C+EIPQLG++RSLNVHVS A LW++ +Q
Sbjct: 121 CLEIPQLGMIRSLNVHVSAACTLWQWNQQ 149
>gi|195145142|ref|XP_002013555.1| GL24204 [Drosophila persimilis]
gi|194102498|gb|EDW24541.1| GL24204 [Drosophila persimilis]
Length = 883
Score = 164 bits (416), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 106/155 (68%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
+ +Q V+VASLID++PNL GLARTCEV LA+ + F +S+TAEK + I+
Sbjct: 729 TNKQLVVVASLIDKLPNLGGLARTCEVLGVQTLALGNKAQTGKSDFTNLSMTAEKTLNII 788
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
E+ + I FL K+ EGF V+G EQTA+S+ + FPKK VL+LG EK GIP D+I
Sbjct: 789 ELKPSCIAAFLMEKQMEGFRVVGAEQTAHSVSFANFKFPKKCVLLLGHEKHGIPADLIGF 848
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
LD +EIPQ GVVRSLNVHV+G++ +WEY +Q F
Sbjct: 849 LDYAVEIPQFGVVRSLNVHVTGSLFIWEYCKQHFF 883
>gi|198452347|ref|XP_001358733.2| GA15007 [Drosophila pseudoobscura pseudoobscura]
gi|198131892|gb|EAL27876.2| GA15007 [Drosophila pseudoobscura pseudoobscura]
Length = 1165
Score = 164 bits (416), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 106/155 (68%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
+ +Q V+VASLID++PNL GLARTCEV LA+ + F +S+TAEK + I+
Sbjct: 1011 TNKQLVVVASLIDKLPNLGGLARTCEVLGVQTLALGNKAQAGKSDFTNLSMTAEKTLNII 1070
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
E+ + I FL K+ EGF V+G EQTA+S+ + FPKK VL+LG EK GIP D+I
Sbjct: 1071 ELKPSCIAAFLMEKQMEGFRVVGAEQTAHSVSFANFKFPKKCVLLLGHEKHGIPADLIGF 1130
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
LD +EIPQ GVVRSLNVHV+G++ +WEY +Q F
Sbjct: 1131 LDYAVEIPQFGVVRSLNVHVTGSLFIWEYCKQHFF 1165
>gi|328769754|gb|EGF79797.1| hypothetical protein BATDEDRAFT_11794, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 108/152 (71%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R V+VASLI ++PNL GL RTCE+F A L + + I D+ F SV+A+KW+PI +
Sbjct: 1 RNPLVVVASLISKVPNLGGLCRTCEIFNAELLVVNNIKIKEDQVFSNTSVSADKWMPIKQ 60
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ +L K G++V+G+EQ S+ L+ + FP+KTV++LG+E+EGIP ++ L
Sbjct: 61 VREEDLETYLIGMKTRGYTVVGVEQATRSVSLNGFEFPRKTVVLLGKEREGIPTHLMAHL 120
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D +EIPQ GV+RSLNVHVSGA+ +WEYT+QQ
Sbjct: 121 DHVLEIPQFGVIRSLNVHVSGALIVWEYTKQQ 152
>gi|449676155|ref|XP_004208571.1| PREDICTED: probable methyltransferase TARBP1-like [Hydra
magnipapillata]
Length = 191
Score = 163 bits (412), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
D++L + + + ++ S + +L A L+++IPNL GL RT E+F S I +++
Sbjct: 23 DEILCSEFVRKQDMKKS--ELILCAVLVEKIPNLGGLCRTAEIFGISSFLIGSQRYINEP 80
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
FQ +SV+AEKW+ I +V + +L K +G+S++G+EQTA S + ++FPKK+VL
Sbjct: 81 GFQSLSVSAEKWLDIQQVLPIKLLQYLMDLKEDGYSLIGVEQTAKSSKIGDFIFPKKSVL 140
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+LG E+ GIPVD+I +LD C+EIPQ+G++RSLNVH+SGAI +WEY +Q F
Sbjct: 141 ILGNERTGIPVDLIQVLDECVEIPQVGIIRSLNVHISGAIMVWEYCKQHVF 191
>gi|313237882|emb|CBY13012.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 110/153 (71%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ S + V+ ASLID+ NL G+ RT EVF A LAI++ +IL K + ++VTA KW+
Sbjct: 488 KKSCEGLVICASLIDKANNLGGITRTAEVFGAESLAISNLSILKSKDYTSLAVTAMKWID 547
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV +++ +L K +G+ + GLEQT NSI ++++ FPKK V+VLG E+EGIP +II
Sbjct: 548 IQEVKAINLQKWLLSMKMKGYCLAGLEQTTNSISIEKFDFPKKCVVVLGNEREGIPTNII 607
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+LD +EIPQ G++RSLNVHVS AI++WEYTR
Sbjct: 608 SLLDVVLEIPQKGIIRSLNVHVSAAISIWEYTR 640
>gi|313246736|emb|CBY35609.1| unnamed protein product [Oikopleura dioica]
Length = 1335
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 110/153 (71%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ S + V+ ASLID+ NL G+ RT EVF A LAI++ +IL K + ++VTA KW+
Sbjct: 1180 KKSCEGLVICASLIDKANNLGGITRTAEVFGAESLAISNLSILKSKDYTSLAVTAMKWID 1239
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV +++ +L K +G+ + GLEQT NSI ++++ FPKK V+VLG E+EGIP +II
Sbjct: 1240 IQEVKAINLQKWLLSMKMKGYCLAGLEQTTNSISIEKFDFPKKCVVVLGNEREGIPTNII 1299
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+LD +EIPQ G++RSLNVHVS AI++WEYTR
Sbjct: 1300 SLLDVVLEIPQKGIIRSLNVHVSAAISIWEYTR 1332
>gi|195450248|ref|XP_002072430.1| GK22831 [Drosophila willistoni]
gi|194168515|gb|EDW83416.1| GK22831 [Drosophila willistoni]
Length = 1132
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 109/162 (67%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
LA +A+ + ++VASLID++PNL GLARTCEVF L IA + + F IS+
Sbjct: 967 DLATADEKATDYELIVVASLIDKLPNLGGLARTCEVFGVKTLIIATKSDVDKSDFANISM 1026
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
TAEK + I EV ++ FL K+ EG+ ++G EQTA+S + FPKK VL+LG EK
Sbjct: 1027 TAEKTLNIEEVKTVALGEFLIGKQSEGYKIVGAEQTAHSTSFSDFRFPKKCVLLLGHEKH 1086
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
GIPVD+I LD +EIPQ G+VRSLNVHV+G++ +WE+ +Q
Sbjct: 1087 GIPVDLIGFLDYAVEIPQFGMVRSLNVHVTGSLFIWEFCKQH 1128
>gi|328708118|ref|XP_003243604.1| PREDICTED: hypothetical protein LOC100571270 [Acyrthosiphon pisum]
Length = 1388
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 110/155 (70%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
++ ++VASLID++ NL GLARTC+VF AS L + + + + K+F +S+TAEK
Sbjct: 1228 HKTKSMLIVVASLIDKVTNLGGLARTCQVFGASTLVVDNLSCVEKKEFTALSMTAEKHQS 1287
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I+EV + ++K +L++KK EG+ ++ EQT +S+ L + P K VL+LG E GIP D++
Sbjct: 1288 IIEVRLKNLKSYLQKKKIEGYQIVAAEQTVDSVKLHEMNLPFKCVLLLGNETSGIPHDLL 1347
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+D C+EI QLG+VRSLNVHV+G++ +WEYT+Q
Sbjct: 1348 STMDICVEIKQLGIVRSLNVHVAGSLFIWEYTKQH 1382
>gi|158294780|ref|XP_001237715.2| AGAP005789-PA [Anopheles gambiae str. PEST]
gi|157015725|gb|EAU76501.2| AGAP005789-PA [Anopheles gambiae str. PEST]
Length = 1402
Score = 160 bits (406), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 102/149 (68%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL++R PNL GLART E+F L I + +K+FQ +S+TAEKW+ I E+
Sbjct: 1247 LIVVASLVNRAPNLGGLARTGEIFAIKQLVINSLQDIGNKEFQALSMTAEKWLKIGELKT 1306
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ + +L K +G+SV+G EQT S + Q FPKK+VLVLG EK G+P +II LD
Sbjct: 1307 HRVVEYLREMKEKGYSVVGAEQTTGSKAIHQLQFPKKSVLVLGHEKNGLPAEIIRHLDLI 1366
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EIPQ GVVRSLNVHV+GAI +WEY +Q
Sbjct: 1367 GEIPQFGVVRSLNVHVTGAIFMWEYAKQH 1395
>gi|303277263|ref|XP_003057925.1| RNA methyltransferase [Micromonas pusilla CCMP1545]
gi|226460582|gb|EEH57876.1| RNA methyltransferase [Micromonas pusilla CCMP1545]
Length = 1938
Score = 160 bits (405), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 103/149 (69%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
V+VASL+DRIPNLAGLARTCEV A L + D +F ISVTAEK +P+ EVP
Sbjct: 1789 LVVVASLLDRIPNLAGLARTCEVMGAEALVMRDKKATTRPEFTQISVTAEKHLPVREVPA 1848
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ +L EG++++GLEQT ++ L+ + FPKKT LVLGRE+EG+ D++ +LD C
Sbjct: 1849 RRLASYLCALAREGYALIGLEQTRGAVALETFQFPKKTALVLGREREGVDADLLSLLDEC 1908
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I Q+G++RSLNVHVS +IA+ Y Q
Sbjct: 1909 VVIKQVGLIRSLNVHVSASIAIHAYAAQH 1937
Score = 81.6 bits (200), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 151/378 (39%), Gaps = 65/378 (17%)
Query: 1201 VLHYSVFSEEEMHMMENTP--------GPLKWFVEKVL----EEGTKSPRTIRLAALHLT 1248
+LH +F +++H+ +P G + WFV + E G R R+ A L
Sbjct: 1107 ILHPRLFERDDLHLAHESPPDASAENVGAILWFVRRATAIANERGGS--RVSRVVAHALC 1164
Query: 1249 GLWLTNPWIIKYYIKELKLLTLYGSVAFDEDFEAELAE----NYDAKTEVSLLAKSPVPE 1304
L +P Y KEL L L G A +A + ++ A+
Sbjct: 1165 ARLLGSPRFACAYAKELFALALAGDHGLTLVERAAVASRRRPGSGSGSDAPATAEDDAAA 1224
Query: 1305 LTEAFIN--TELYARVSVAVLFSKLADQTEIVG--------SAKE---CQDALD------ 1345
LT + + + +RV+V L LA Q G + KE ++ +D
Sbjct: 1225 LTRWLDDPASHVASRVAVLSLAHALARQRPPKGWRPSAYFENPKEYDHVKEGIDKDVPIK 1284
Query: 1346 ----------------SGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICIL 1389
+ + +GL D DL +E Y++ S HRRK+RAWQ++C
Sbjct: 1285 ISESPQERYAWHARRAAEAILRVGLAAVSGGDADLCKETYRRGSLTHRRKIRAWQVLCAA 1344
Query: 1390 SRFVDNDIVGQVTHFLHI-------SLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVP 1442
S + G + ++ +N+P VR Y E F + P ++ +P
Sbjct: 1345 SPALGEPFTGTGGELGALLLAAAPKAVAHHNMPGVRYYAEVFFTRAAVAHPGVIDVVALP 1404
Query: 1443 ILRDYDMRPQALSSYVFIAANVILHASKAVQFR---HLEDLLPPIVPLLTSHHHSLRGFT 1499
LRD ++ A +S++ + A+ +L + + + R H L+ I P + +H LR F
Sbjct: 1405 ALRDPHVKAAAAASWIVVTASFVLRSPREMIERDAWHRRALV-AITPWALAQNHMLRVFA 1463
Query: 1500 QLLVYQVLCKLFPTLDFG 1517
Q+ + V+ + F FG
Sbjct: 1464 QVAAHDVV-EAFGAAAFG 1480
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 452 FILLYEMLEEYSTHLVEAAWNHQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLS 511
F+ +Y LE+Y+ HLVEAAW H L H ++ + + ++
Sbjct: 323 FVAMYSALEDYAAHLVEAAWAHLSAL-------HPRAGDASSSSPPPPPPTPPVEYRYVQ 375
Query: 512 VLWERGFCHGNPQVRYMIMQSFLGIEWKSYENCA 545
W RG H NP VR +++F EW + A
Sbjct: 376 AAWTRGLRHPNPAVRASTLEAFCDREWSAARAGA 409
>gi|170051070|ref|XP_001861598.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872475|gb|EDS35858.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1272
Score = 160 bits (404), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A ++VASL+DR PNL GLAR+ E+F + + K+FQ +S+TAEKW+
Sbjct: 1111 KAKEDGLIVVASLVDRAPNLGGLARSSEIFGVRQYVVGSLKDVESKEFQALSMTAEKWLN 1170
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
+ E+ + +L K +G++++G EQT S P+ Q FP + VLVLG EKEG+P II
Sbjct: 1171 VAELKSFQLVDYLREMKAKGYAIVGAEQTTGSRPIQQIQFPARAVLVLGHEKEGLPAHII 1230
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD EIPQ GVVRSLNVHV+GAI +WEY RQ
Sbjct: 1231 SQLDIVAEIPQFGVVRSLNVHVTGAIFMWEYARQH 1265
>gi|195053324|ref|XP_001993576.1| GH20351 [Drosophila grimshawi]
gi|193895446|gb|EDV94312.1| GH20351 [Drosophila grimshawi]
Length = 1157
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ Q+ ++VASLID++PNL GLARTCEV L +A ++ F +S+TAEK +
Sbjct: 1000 KHREQEMIVVASLIDKLPNLGGLARTCEVLGVKTLILAAKSLADKSDFTNLSMTAEKTLN 1059
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV ++ FL K+ G+ V+G EQTA SI + FP+K +L+LG EK GIPVD+I
Sbjct: 1060 IAEVKPTALAEFLIEKQSLGYKVVGAEQTAQSISFTDFKFPEKCILLLGHEKHGIPVDLI 1119
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LD +EIPQ GVVRSLNVHV+G++ +WEY +Q
Sbjct: 1120 ALLDFAVEIPQFGVVRSLNVHVTGSLFIWEYCKQH 1154
>gi|195056077|ref|XP_001994939.1| GH13300 [Drosophila grimshawi]
gi|193892702|gb|EDV91568.1| GH13300 [Drosophila grimshawi]
Length = 1158
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ Q+ ++VASLID++PNL GLARTCEV L +A ++ F +S+TAEK +
Sbjct: 1001 KHREQEMIVVASLIDKLPNLGGLARTCEVLGVKTLILAAKSLADKSDFTNLSMTAEKTLN 1060
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I EV ++ FL K+ G+ V+G EQTA SI + FP+K +L+LG EK GIPVD+I
Sbjct: 1061 IAEVKPTALAEFLIEKQSLGYKVVGAEQTAQSISFTDFKFPEKCILLLGHEKHGIPVDLI 1120
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LD +EIPQ GVVRSLNVHV+G++ +WEY +Q
Sbjct: 1121 ALLDFAVEIPQFGVVRSLNVHVTGSLFIWEYCKQH 1155
>gi|157138295|ref|XP_001664217.1| hypothetical protein AaeL_AAEL013974 [Aedes aegypti]
gi|108869532|gb|EAT33757.1| AAEL013974-PA [Aedes aegypti]
Length = 451
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 104/156 (66%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + + ++VASL++R PNL GLAR+ E+F + L +K+FQ +S+TAEKW+
Sbjct: 292 KGNVEGLIVVASLVNRAPNLGGLARSSEIFAVKQYIVNSLKDLENKEFQALSMTAEKWLN 351
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
+ E+ I +L K +G+SV+G EQT S P+ Q FPK+++LVLG EKEG+P II
Sbjct: 352 VAELKSFQIVDYLLEMKSKGYSVVGAEQTTGSRPIQQIEFPKRSILVLGHEKEGLPAHII 411
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
LD EIPQ GVVRSLNVHV+GAI +WEY +Q
Sbjct: 412 SHLDIIAEIPQFGVVRSLNVHVTGAIFMWEYAKQHH 447
>gi|195112288|ref|XP_002000706.1| GI22376 [Drosophila mojavensis]
gi|193917300|gb|EDW16167.1| GI22376 [Drosophila mojavensis]
Length = 1157
Score = 157 bits (397), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 115/179 (64%)
Query: 1677 LEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
L ++++ + + LA + + + Q+ ++VASLID++PNL GLARTCEV L
Sbjct: 976 LNVQRKINPINDIYTDNDLAQSSEQLNEQELIVVASLIDKLPNLGGLARTCEVLGVKTLI 1035
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+ + F +S+TAEK + I EV S+ +L K+ +G+ ++G EQTA+S
Sbjct: 1036 LGAKSFALKSDFTNLSMTAEKTLNIGEVKPASLASYLIEKQSQGYKIVGAEQTAHSTNFT 1095
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ FP+K VL+LG EK GIPVD+I +LD +EIPQ GVVRSLNVHV+G++ +WEY +Q
Sbjct: 1096 DFKFPEKCVLLLGHEKHGIPVDLIALLDFAVEIPQFGVVRSLNVHVTGSLFIWEYCKQH 1154
>gi|111226655|ref|XP_641892.2| tRNA/rRNA methyltransferase SpoU family protein [Dictyostelium
discoideum AX4]
gi|90970700|gb|EAL67904.2| tRNA/rRNA methyltransferase SpoU family protein [Dictyostelium
discoideum AX4]
Length = 1680
Score = 157 bits (396), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 107/149 (71%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
RQ ++ +LI+ PN+AGL RTCE+F +AI + +L D QFQ +SV+AEKWVP +E
Sbjct: 1521 RQSIIVCGTLIENTPNIAGLIRTCEIFNVEEVAIPNNKLLSDPQFQRVSVSAEKWVPTIE 1580
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ +L+ KK +G+S+LG+EQT+ S L + FP K +L+LG+E+ GIP + + ++
Sbjct: 1581 VTKPNLLDYLKLKKKQGYSILGVEQTSQSKRLSSFQFPNKCLLLLGQEQNGIPAEYLSII 1640
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
D +EI QLG +RSLNVHVSG+I +WEYT
Sbjct: 1641 DYAVEIEQLGQIRSLNVHVSGSIVIWEYT 1669
Score = 50.4 bits (119), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 29/214 (13%)
Query: 1363 DLARELYKKYSAIHRRKVRAWQMICILSRFVD-------NDIVGQVTHFLHISLYRNNLP 1415
+L++ Y + S +++ K + W+ +C L+ V ND+ +V+ + +L N
Sbjct: 1132 ELSKREYSQQSRLNKIKCKLWRTLCSLTHIVSFTSGGESNDLYEKVSDLMWKTLELKNHG 1191
Query: 1416 SVRQYLETFAITIYLKFPSL--VAEQLV-----PILRDYDMRPQALSSYVFIAANVILHA 1468
+VR ++ F + + +K P++ +QL+ I DY Q +S + I++ + +
Sbjct: 1192 NVRYLIQLFIVNVLIKSPNIQITNQQLINRMELSINADY----QISASLIIISSTFLYYL 1247
Query: 1469 SKAVQFRHLED----LLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPL 1524
Q H +D L I+P T HH++R +QL +Y ++ K F L + L
Sbjct: 1248 LNNYQ-DHYQDCVINLFKTILPWSTDFHHAVRTTSQLAIYSIINKKFKILQQFNDNQFIL 1306
Query: 1525 EKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDP 1558
L +YL + RLR + ++ DP
Sbjct: 1307 ------SLYNYLDTHKIQKRLREKQTLFIQNDDP 1334
>gi|190348050|gb|EDK40436.2| hypothetical protein PGUG_04534 [Meyerozyma guilliermondii ATCC 6260]
Length = 1409
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++V+SL+D+ PNL G+ R C+V A L +AD + + F+ ++VTA++W+P+ E
Sbjct: 1256 RSDLIVVSSLVDKAPNLGGICRLCDVLGAGLLTLADIRVKNSPHFKNVAVTADRWMPMEE 1315
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
VPV+ IK+++ +KK EG++++GLEQT S+ L+ + FPKKT+++LGREKEGIP D++
Sbjct: 1316 VPVDQIKNYMVQKKSEGYTLVGLEQTDKSLELNSELKFPKKTLMLLGREKEGIPGDLLAE 1375
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+GV+RS+N+ + A+ + Y+ Q
Sbjct: 1376 LDFCVEIKQVGVIRSMNIQTATAVIVHAYSTQH 1408
>gi|146415670|ref|XP_001483805.1| hypothetical protein PGUG_04534 [Meyerozyma guilliermondii ATCC 6260]
Length = 1409
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++V+SL+D+ PNL G+ R C+V A L +AD + + F+ ++VTA++W+P+ E
Sbjct: 1256 RSDLIVVSSLVDKAPNLGGICRLCDVLGAGLLTLADIRVKNSPHFKNVAVTADRWMPMEE 1315
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
VPV+ IK+++ +KK EG++++GLEQT S+ L+ + FPKKT+++LGREKEGIP D++
Sbjct: 1316 VPVDQIKNYMVQKKSEGYTLVGLEQTDKSLELNSELKFPKKTLMLLGREKEGIPGDLLAE 1375
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+GV+RS+N+ + A+ + Y+ Q
Sbjct: 1376 LDFCVEIKQVGVIRSMNIQTATAVIVHAYSTQH 1408
>gi|325192103|emb|CCA26564.1| SpoU rRNA Methylase family putative [Albugo laibachii Nc14]
Length = 1716
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 113/164 (68%), Gaps = 9/164 (5%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQLISVTAE 1756
++I + ++ ASLID++ NLAGLARTCE+F A L +++ N I +D F +S +A
Sbjct: 1548 DSIYEKSNRVIMCASLIDKVTNLAGLARTCEIFGAEKLVVSNLNTIKNDATFVSMSSSAH 1607
Query: 1757 KWVPIVEVP-----VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
KW+ + ++ +++I H+ K+ E + ++GLEQT+ S +Y FP K V++LG E
Sbjct: 1608 KWIKMEQISRGESLIDAIHHW---KEVEKYHIIGLEQTSRSQCCSKYRFPDKAVIILGSE 1664
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
GIPV+I+ ++D C+EIPQ G+VRSLNVHVSGAI LWEYTRQ+
Sbjct: 1665 GAGIPVEILRLVDVCVEIPQFGLVRSLNVHVSGAILLWEYTRQR 1708
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 60/286 (20%)
Query: 1315 YARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKYSA 1374
+ R+ V +L+D EI + L LL L+ +V N + ++K
Sbjct: 1154 FVRLRVLTWLEQLSDAHEI------------TDNLVLLLLMQYVNNPE------WRKPQM 1195
Query: 1375 IHRR----KVRAWQMICILSRFVDN-DIVGQVTHFLHISLY-RNNLPSVRQYLETFAI-- 1426
IH +VRAWQ +C+LSR + ++ Q + +++ L +VR Y E FA+
Sbjct: 1196 IHSDIFGCQVRAWQALCVLSRHITTLSLLQQAEDLFYGTIFCLPALNTVRYYFEVFAMRL 1255
Query: 1427 ----TIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVI-LHASKAVQFRHLEDLL 1481
I P+ + + ++P+L +++ PQ L+S + I + + +H K + +L
Sbjct: 1256 IERSNILHALPNSLEKHILPLLFNFNQPPQQLTSLLLILGHFVHVHIGKHSHSAMKDPIL 1315
Query: 1482 P-------------------PIVPLLTS--------HHHSLRGFTQLLVYQVLCKLFPTL 1514
PI+ +L S H +R Q + +L +
Sbjct: 1316 VSSSAESGSDAPSPNPIQSMPIIEILISGLLCWLNGSHGHVRVIAQYFLRTLLPHYIALV 1375
Query: 1515 DFGTSQK--MPLEKSCFEDLKSYLAKNSDCTRLRASMSGYLDAYDP 1558
+ G Q LE + +L++N +C R+ S L+ P
Sbjct: 1376 ENGEVQNGGHLLEWHFLTETSRFLSENKECMRMHRRQSHQLENIQP 1421
>gi|367000419|ref|XP_003684945.1| hypothetical protein TPHA_0C03590 [Tetrapisispora phaffii CBS 4417]
gi|357523242|emb|CCE62511.1| hypothetical protein TPHA_0C03590 [Tetrapisispora phaffii CBS 4417]
Length = 1426
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 131/215 (60%), Gaps = 16/215 (7%)
Query: 1652 TLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETI----------R 1701
+L +N+D S+ R+ EI+ D+ Q LQ +S A ET+ +
Sbjct: 1216 SLIGSDNED----SWLSKRDPSNNNREIKVIDQKGSQ-LQTKSGAWETVVDINATENEEK 1270
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
R ++V+SL+D+ PNL G+ R C+V L + D + + QF+ ++VTA+KW+P+
Sbjct: 1271 VKRSDLIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQDLRVKNHPQFKNVAVTADKWMPM 1330
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDII 1820
VEVP+++I F++ KK EG++++GLEQT SI L+QY FPKK++++LG E GIP ++
Sbjct: 1331 VEVPIDNIIKFMQEKKKEGYTLIGLEQTDKSIELNQYYKFPKKSLILLGTEAHGIPGYLL 1390
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1391 SELDLCLEIQQHGVIRSMNIQTATAVICYSYTVQH 1425
>gi|195391444|ref|XP_002054370.1| GJ24409 [Drosophila virilis]
gi|194152456|gb|EDW67890.1| GJ24409 [Drosophila virilis]
Length = 1161
Score = 155 bits (391), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 116/178 (65%)
Query: 1677 LEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
L ++++ + + +L+ + + ++ ++VASLID++PNL GLARTCEV L
Sbjct: 979 LNVQRKMNPINDIYNYNNLSKTEGQLNERELIVVASLIDKLPNLGGLARTCEVLGVKTLI 1038
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+ + + F +S+TAEK + I+EV + +L K+ G+ ++G EQTA+S+
Sbjct: 1039 LGAKSFVDKSDFTNLSMTAEKTLNIIEVRPAGLGEYLIAKQSMGYKIVGAEQTAHSVSFA 1098
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ FP+K +L+LG EK GIPVD+I +LD +EIPQ GVVRSLNVHV+G++ +WEY +Q
Sbjct: 1099 DFKFPEKCILLLGHEKHGIPVDLIALLDYAVEIPQFGVVRSLNVHVTGSLFIWEYCKQ 1156
>gi|124808939|ref|XP_001348447.1| rRNA (adenosine-2'-O-)-methyltransferase, putative [Plasmodium
falciparum 3D7]
gi|23497341|gb|AAN36886.1| rRNA (adenosine-2'-O-)-methyltransferase, putative [Plasmodium
falciparum 3D7]
Length = 2779
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+++ASLID++PNLAGL RTCE+F L I + NI+ D QFQ IS TA KW+ I E+
Sbjct: 2632 IVIASLIDKLPNLAGLCRTCEIFNVKKLLIDNINIIKDYQFQKISSTANKWMNIKELK-K 2690
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
S KK + +S++GLEQT NS L+ ++FPKK +L+LG EKEG+P I+ L CI
Sbjct: 2691 SNIINYIIKKKKKYSIIGLEQTHNSQKLNHFVFPKKCILILGDEKEGLPSSILMFLHHCI 2750
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EIP G++RSLNVHVS AI ++EY +QQ
Sbjct: 2751 EIPGQGIIRSLNVHVSAAITIYEYFKQQ 2778
>gi|167517941|ref|XP_001743311.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778410|gb|EDQ92025.1| predicted protein [Monosiga brevicollis MX1]
Length = 1541
Score = 154 bits (390), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 119/185 (64%), Gaps = 9/185 (4%)
Query: 1678 EIEKEDELFDQVLQARSLAMETIRAS------RQQFVLV--ASLIDRIPNLAGLARTCEV 1729
+++K+ D V +A LA R++F L+ AS ++ NL GL RTCE+
Sbjct: 1349 DVQKKIVTADTVAEAAKLAFGETTGQLMRIHDRKRFPLIVAASFVNIPYNLGGLTRTCEI 1408
Query: 1730 FKASGLAIADANILHDKQFQLISVTAEKWVPI-VEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
F A L + D +L K+++ +SV++E+W+ + P + + +L RK+ EG++++GLEQ
Sbjct: 1409 FNADRLVMPDNRVLQSKEYKGVSVSSERWMHFDIVKPEDELVEYLVRKRREGYTIVGLEQ 1468
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
TA S+PL +Y FP++TVLVLG E+ GI ++ ++D C+EIPQ GV RSLNVHVS AIA+
Sbjct: 1469 TAESVPLQEYTFPERTVLVLGEERRGISPKVLAVIDRCVEIPQFGVTRSLNVHVSAAIAI 1528
Query: 1849 WEYTR 1853
+ Y R
Sbjct: 1529 YAYVR 1533
>gi|367016669|ref|XP_003682833.1| hypothetical protein TDEL_0G02550 [Torulaspora delbrueckii]
gi|359750496|emb|CCE93622.1| hypothetical protein TDEL_0G02550 [Torulaspora delbrueckii]
Length = 1394
Score = 153 bits (387), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R ++V+SL+D+ PNL G+ R C+V LA+ D
Sbjct: 1217 LQTKSGAWETLMDIDSDTPDKNVTRSDLIVVSSLVDKPPNLGGICRLCDVLGVGLLAVQD 1276
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+P+ EV + I F++ KK EG+ ++GLEQT NS+ LD Y
Sbjct: 1277 IRVKNHPQFKNVAVTADRWMPMAEVSIQGIADFMQEKKKEGYVLIGLEQTDNSVKLDTHY 1336
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP D++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1337 KFPKKSLILLGTEAHGIPGDLLSQLDLCLEIQQFGVIRSMNIQTATAVIVHSYTIQH 1393
>gi|194744594|ref|XP_001954778.1| GF18440 [Drosophila ananassae]
gi|190627815|gb|EDV43339.1| GF18440 [Drosophila ananassae]
Length = 1141
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
++ ++VASLID++PNL GLARTC+V L + + F +S+TAEK + IVEV
Sbjct: 986 REIIVVASLIDKLPNLGGLARTCDVLGVKTLILGLKSQAEKSDFTNLSMTAEKTLNIVEV 1045
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
++ FL K+ EG+ ++G EQTA+S ++ FPKK++L+LG EK GIP D+I LD
Sbjct: 1046 KPETLAEFLIGKQLEGYKIVGAEQTAHSTNFTEFKFPKKSILLLGHEKHGIPADLIGFLD 1105
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G VRSLNVHV+G++ +WEY +Q
Sbjct: 1106 YAVEIPQFGTVRSLNVHVTGSLFIWEYCKQH 1136
>gi|195330985|ref|XP_002032183.1| GM26423 [Drosophila sechellia]
gi|194121126|gb|EDW43169.1| GM26423 [Drosophila sechellia]
Length = 618
Score = 151 bits (382), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
+ ++VASLID++PNL GLARTCEV + L + + F +S+TAEK + I+EV
Sbjct: 464 HELIVVASLIDKLPNLGGLARTCEVLGVNTLILGLKSQAEKSDFTNLSMTAEKTLNILEV 523
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
S+ FL K+ EG+ ++G EQTA+S + FPKK++L+LG EK GIP ++I LD
Sbjct: 524 NPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIGFLD 583
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G+VRSLNVHV+G++ +WEY +Q
Sbjct: 584 YAVEIPQYGLVRSLNVHVAGSLFIWEYCKQH 614
>gi|302848076|ref|XP_002955571.1| hypothetical protein VOLCADRAFT_35411 [Volvox carteri f. nagariensis]
gi|300259194|gb|EFJ43424.1| hypothetical protein VOLCADRAFT_35411 [Volvox carteri f. nagariensis]
Length = 148
Score = 151 bits (381), Expect = 4e-33, Method: Composition-based stats.
Identities = 64/148 (43%), Positives = 101/148 (68%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL++ +PN+AGL RTCE L + ++ + F+ +VT+E+W+P+VEV
Sbjct: 1 LIVVASLLENVPNMAGLCRTCESLGCEALVLPSRAVVASEAFKRQAVTSERWLPLVEVSP 60
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ +L + G+ ++G+EQ A S+PL + FP++ +L+LG E+ G+P +I MLD C
Sbjct: 61 RDLAAYLREVRGRGYLLIGVEQAAGSVPLQTFTFPQRCLLLLGNEQSGVPQHLIAMLDKC 120
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+EIP LGV RSLN HVSGA+A+W+Y +Q
Sbjct: 121 VEIPMLGVTRSLNAHVSGAMAVWQYVQQ 148
>gi|195572842|ref|XP_002104404.1| GD20941 [Drosophila simulans]
gi|194200331|gb|EDX13907.1| GD20941 [Drosophila simulans]
Length = 1138
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
+ ++VASLID++PNL GLARTCEV + L + + F +S+TAEK + I+EV
Sbjct: 984 HELIVVASLIDKLPNLGGLARTCEVLGVNTLILGLKSQAEKSDFTNLSMTAEKTLNILEV 1043
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
S+ FL K+ EG+ ++G EQTA+S + FPKK++L+LG EK GIP ++I LD
Sbjct: 1044 NPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIGFLD 1103
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G+VRSLNVHV+G++ +WEY +Q
Sbjct: 1104 YAVEIPQYGLVRSLNVHVAGSLFIWEYCKQH 1134
>gi|21355819|ref|NP_651031.1| CG18596 [Drosophila melanogaster]
gi|17862774|gb|AAL39864.1| LP02352p [Drosophila melanogaster]
gi|23176042|gb|AAF55981.2| CG18596 [Drosophila melanogaster]
gi|220960120|gb|ACL92596.1| CG18596-PA [synthetic construct]
Length = 1136
Score = 150 bits (380), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
+ ++VASLID++PNL GLARTCEV + L + + F +S+TAEK + I+EV
Sbjct: 984 HELIVVASLIDKLPNLGGLARTCEVLGVNTLILGLKSQAEKSDFTNLSMTAEKTLNILEV 1043
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
S+ FL K+ EG+ ++G EQTA+S + FPKK++L+LG EK GIP ++I LD
Sbjct: 1044 NPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIGFLD 1103
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G+VRSLNVHV+G++ +WEY +Q
Sbjct: 1104 YAVEIPQYGLVRSLNVHVAGSLFIWEYCKQH 1134
>gi|410075339|ref|XP_003955252.1| hypothetical protein KAFR_0A06820 [Kazachstania africana CBS 2517]
gi|372461834|emb|CCF56117.1| hypothetical protein KAFR_0A06820 [Kazachstania africana CBS 2517]
Length = 1411
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ R ++++SL+D+ PNL G+ R C+V L + D
Sbjct: 1234 LQTKSGAWETVMDLDNNKTNDVVKRSDLIVISSLVDKPPNLGGICRLCDVLGVGLLTVQD 1293
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA+KW+PI EVPV+ I F++ KK EG++++GLEQT SI LD Y
Sbjct: 1294 IKVKNHPQFKNVAVTADKWMPIEEVPVDKIIDFMKSKKREGYTLIGLEQTDKSIKLDTNY 1353
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1354 KFPKKSLILLGTEAFGIPGHLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTIQH 1410
>gi|194911129|ref|XP_001982293.1| GG11125 [Drosophila erecta]
gi|190656931|gb|EDV54163.1| GG11125 [Drosophila erecta]
Length = 1138
Score = 150 bits (379), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
+ ++VASLID++PNL GLARTCEV L + + F +S+TAEK + I+EV
Sbjct: 984 HELIVVASLIDKLPNLGGLARTCEVLGVKTLILGLKSQAEKSDFTNLSMTAEKTLNILEV 1043
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
S+ FL K+ EG+ ++G EQTA+S + FPKK++L+LG EK GIP ++I LD
Sbjct: 1044 NPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIGFLD 1103
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G+VRSLNVHV+G++ +WEY +Q
Sbjct: 1104 YAVEIPQYGLVRSLNVHVAGSLFIWEYCKQH 1134
>gi|195502550|ref|XP_002098273.1| GE10291 [Drosophila yakuba]
gi|194184374|gb|EDW97985.1| GE10291 [Drosophila yakuba]
Length = 1138
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV 1764
+ ++VASLID++PNL GLARTCEV L + + F +S+TAEK + I+EV
Sbjct: 984 HELIVVASLIDKLPNLGGLARTCEVLGVKTLILGLKSQAEKSDFTNLSMTAEKTLNILEV 1043
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
S+ FL K+ EG+ ++G EQTA+S + FPKK++L+LG EK GIP ++I LD
Sbjct: 1044 NPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANLIGFLD 1103
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+EIPQ G+VRSLNVHV+G++ +WEY +Q
Sbjct: 1104 YAVEIPQYGLVRSLNVHVAGSLFIWEYCKQH 1134
>gi|395849828|ref|XP_003797515.1| PREDICTED: probable methyltransferase TARBP1 [Otolemur garnettii]
Length = 1620
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 2/155 (1%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF A+ LA+ + D+QFQ +SV+AE+W+P+
Sbjct: 1457 SVSRLIVVASLIDKPTNLGGLCRTCEVFGAAVLAVGSLQCVKDRQFQHLSVSAEQWLPLA 1516
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTAN--SIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
EV F L +++ + SI L QY FP+K++L+LG E EGIP ++I
Sbjct: 1517 EVGGEQFIKFYLCLLALLTVFLAMQKLFSLISIDLTQYCFPEKSLLLLGNEHEGIPANLI 1576
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ G++RSLNVHVSGA+ +WEYTRQQ
Sbjct: 1577 QQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQ 1611
>gi|365983564|ref|XP_003668615.1| hypothetical protein NDAI_0B03380 [Naumovozyma dairenensis CBS 421]
gi|343767382|emb|CCD23372.1| hypothetical protein NDAI_0B03380 [Naumovozyma dairenensis CBS 421]
Length = 1446
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ R ++VASL+D+ PNL G+ R C+V L + D
Sbjct: 1269 LQTKSGAWETVLDIDTKKSNEMVKRSDLIVVASLVDKPPNLGGICRLCDVLGVGLLTVQD 1328
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
+ + QF+ ++VTA++W+P+ EVPV+ I F++ KK EG+S++GLEQT S+ LD Y
Sbjct: 1329 IKVKNHPQFKNVAVTADRWMPMEEVPVDGIVEFMKLKKREGYSLIGLEQTDKSVKLDNDY 1388
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K +++LG E GIP +++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1389 RFPRKCLILLGTEAHGIPGPLLNELDLCLEIKQFGVIRSMNIQTATAVIVQSYTVQH 1445
>gi|68491281|ref|XP_710551.1| potential tRNA (Gm18) ribose methyltransferase [Candida albicans
SC5314]
gi|68491304|ref|XP_710540.1| potential tRNA (Gm18) ribose methyltransferase [Candida albicans
SC5314]
gi|46431756|gb|EAK91286.1| potential tRNA (Gm18) ribose methyltransferase [Candida albicans
SC5314]
gi|46431768|gb|EAK91297.1| potential tRNA (Gm18) ribose methyltransferase [Candida albicans
SC5314]
Length = 1440
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 136/218 (62%), Gaps = 14/218 (6%)
Query: 1645 LDFQKKITLPKHENQDN--SSSSFFGNRE-AYKQLLEIEKEDELFDQVLQARSLAMETIR 1701
L+ +K I P N SSSSF + A+ +++ D + D V + ++R
Sbjct: 1229 LNLKKPIVTPIKPVDSNEVSSSSFLQTKSGAWNTIMD---ADAVVDDVNNTNN----SVR 1281
Query: 1702 AS---RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKW 1758
S R + ++V+SL+D+ PNL G+ R C+V A L + D + + F+ ++VTA++W
Sbjct: 1282 GSEIPRSELIVVSSLVDKPPNLGGICRLCDVLGAGLLTLHDIEVKNHINFKTVAVTADQW 1341
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPV 1817
+P++EV + +IK +L KK EG++++GLEQT SI L+ + FPKK+++++G+E+EGIP
Sbjct: 1342 MPMIEVKMENIKQYLLDKKREGYTLIGLEQTDKSIELNNDLKFPKKSLILIGKEREGIPG 1401
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D++ LD C+EI Q+G+VRS+N+ + AI + Y+ Q
Sbjct: 1402 DLLAELDFCVEIKQVGIVRSMNIQTATAIIVHAYSSQH 1439
>gi|238881479|gb|EEQ45117.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1443
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 148/246 (60%), Gaps = 15/246 (6%)
Query: 1617 IGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDN--SSSSFFGNRE-AY 1673
IG+DP +++ +EE K L+ +K I P N SSSSF + A+
Sbjct: 1205 IGQDPQLW-MINEEKEEEEEEDYDKKRKLNLKKPIVTPIKPVDSNEVSSSSFLQTKSGAW 1263
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRAS---RQQFVLVASLIDRIPNLAGLARTCEVF 1730
+++ D + D V + ++R S R + ++V+SL+D+ PNL G+ R C+V
Sbjct: 1264 NTIMD---ADAVVDDVNNTNN----SVRGSEIPRSELIVVSSLVDKPPNLGGICRLCDVL 1316
Query: 1731 KASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
A L + D + + F+ ++VTA++W+P++EV + +IK +L KK EG++++GLEQT
Sbjct: 1317 GAGLLTLHDIEVKNHINFKTVAVTADQWMPMIEVKMENIKQYLLDKKREGYTLIGLEQTD 1376
Query: 1791 NSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
SI L+ + FPKK+++++G+E+EGIP D++ LD C+EI Q+G+VRS+N+ + AI +
Sbjct: 1377 KSIELNNDLKFPKKSLILIGKEREGIPGDLLAELDFCVEIKQVGIVRSMNIQTATAIIVH 1436
Query: 1850 EYTRQQ 1855
Y+ Q
Sbjct: 1437 AYSSQH 1442
>gi|344305286|gb|EGW35518.1| hypothetical protein SPAPADRAFT_58751 [Spathaspora passalidarum NRRL
Y-27907]
Length = 606
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++V+SL+D+ PNL G+ R C+V A L + D + QF+ ++VTA+ W+P++E
Sbjct: 453 RSDLIVVSSLVDKPPNLGGICRLCDVLGAGTLTLNDMTVTQHPQFKNVAVTADHWMPMIE 512
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
V + IK +L KK EG++++GLEQT S+ L+ + FPKK++++LG+E+EGIP D++
Sbjct: 513 VKMEEIKDYLIAKKKEGYTLIGLEQTTESVELNNKLEFPKKSLILLGKEREGIPGDLLSE 572
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+GV+RS+N+ + AI + Y+ Q
Sbjct: 573 LDFCVEIKQVGVIRSMNIQTATAIIVHAYSSQH 605
>gi|156845610|ref|XP_001645695.1| hypothetical protein Kpol_1043p27 [Vanderwaltozyma polyspora DSM
70294]
gi|156116362|gb|EDO17837.1| hypothetical protein Kpol_1043p27 [Vanderwaltozyma polyspora DSM
70294]
Length = 1430
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 113/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1253 LQTKSGAWETVLDIDSEKSDRSVTRSDLIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1312
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPL-DQY 1798
+ + QF+ ++VTA++W+P+ EVP++ I F+ KK EG++++GLEQT SI L ++Y
Sbjct: 1313 IRVKNHPQFKNVAVTADRWMPMEEVPIDGIIEFMRAKKKEGYTLIGLEQTDKSIQLNNKY 1372
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ ++ YT Q
Sbjct: 1373 TFPKKSLILLGTEAHGIPGHLLSELDLCLEIEQHGVIRSMNIQTATAVIVYSYTVQH 1429
>gi|366990593|ref|XP_003675064.1| hypothetical protein NCAS_0B06090 [Naumovozyma castellii CBS 4309]
gi|342300928|emb|CCC68693.1| hypothetical protein NCAS_0B06090 [Naumovozyma castellii CBS 4309]
Length = 1429
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ R ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1252 LQTKSGAWETVFDIDNKKSHQIVKRSDLIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1311
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W P+VEVPV+ I F++ KK EG++++GLEQT S+ LD Y
Sbjct: 1312 LRVKNHPQFKNVAVTADRWQPMVEVPVDEITKFMKSKKQEGYTLIGLEQTDKSVQLDNNY 1371
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++++LG E GIP +++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1372 KFPRKSLILLGTEAHGIPGPLLNELDLCLEIKQHGVIRSMNIQTATAVIVHSYTVQH 1428
>gi|150864630|ref|XP_001383531.2| hypothetical protein PICST_82718 [Scheffersomyces stipitis CBS 6054]
gi|149385886|gb|ABN65502.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 1408
Score = 149 bits (376), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 1698 ETIRAS---RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVT 1754
ET R R ++V+SL+D+ PNL G+ R C+V A L + D + QF+ ++VT
Sbjct: 1246 ETTRGKEVVRSDLIVVSSLVDKPPNLGGICRLCDVLGAGLLTLNDIKVKSHPQFKNVAVT 1305
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKE 1813
A+ W+P++EV IK +L KK EG++++GLEQT S+ L ++ FPKK++++LGREKE
Sbjct: 1306 ADYWMPMIEVKPEDIKMYLREKKREGYTLIGLEQTDKSVELNNELQFPKKSLILLGREKE 1365
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+P D++ LD C+EI Q+GV+RS+N+ + AI + Y+ Q
Sbjct: 1366 GVPGDLLAELDFCVEIKQVGVIRSMNIQTATAIIVHAYSTQH 1407
>gi|401427257|ref|XP_003878112.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494359|emb|CBZ29660.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 2035
Score = 149 bits (375), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 102/156 (65%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+R +Q ++V SL++ N+AGL R E+F + + + + F + +AE W+
Sbjct: 1871 LRTQKQSIIVVGSLLENPVNIAGLCRCGEIFAIESIVVPEKKVFEHPHFVAAARSAELWI 1930
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
P EV + ++LE + G+ V+G+EQTA S+PL+Q+ FP++ +VLG E +G+P +
Sbjct: 1931 PWEEVVPKDLPYYLEGLRRRGYVVVGIEQTAASVPLEQFSFPERCAVVLGAEGQGVPAPL 1990
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I +LD C+EIPQ G++RSLNVHV+GAI ++EYTRQ
Sbjct: 1991 IPLLDVCVEIPQYGLIRSLNVHVAGAITMYEYTRQH 2026
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 51/311 (16%)
Query: 1172 MWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLE 1231
MW +R R+ +AAL +VLHY +M + P +K + +VL+
Sbjct: 1343 MWEHMRE-------VGARQYTRLAALAFTVLHY---------VMPHHPDYVKEVLLRVLQ 1386
Query: 1232 ----EGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAEL 1284
+ + R + AA+ + L +P W + L+ + LY +V F+ + + E
Sbjct: 1387 GEGKDAQTADRDVYFAAITASLQVLHDPANNWPV------LRDVVLYAAVLFNTNRDEEE 1440
Query: 1285 AENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKL--ADQTEIVGSAKECQD 1342
E+ A TE LL P L + T A V A+ + L + G A
Sbjct: 1441 NESTVAVTE-PLLWTWP-EALRLCYPPTTCMAAVGRAMAVATLLWCCHESVAGRAVP--- 1495
Query: 1343 ALDSGKLFLLGLLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFV-DNDIV--G 1399
+ LL + E S HR ++R WQ++C L + D V
Sbjct: 1496 -------LTMELLRMNTCHPVVTHEPCMPNSRTHRTRMRLWQLLCALLPCLADQHAVPPA 1548
Query: 1400 QVTHFLHISLYR----NNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALS 1455
QV + ++ NN+ SVR+ +E +AI + + PSL L L Y +RPQ
Sbjct: 1549 QVEEVFRMLVFHCLTVNNMGSVRRLMELYAIRLVEQRPSLYT-VLSEALGSYSLRPQVCG 1607
Query: 1456 SYVFIAANVIL 1466
SY+ IA +V+L
Sbjct: 1608 SYILIACHVLL 1618
>gi|260944646|ref|XP_002616621.1| hypothetical protein CLUG_03862 [Clavispora lusitaniae ATCC 42720]
gi|238850270|gb|EEQ39734.1| hypothetical protein CLUG_03862 [Clavispora lusitaniae ATCC 42720]
Length = 1423
Score = 148 bits (374), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 109/154 (70%), Gaps = 1/154 (0%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
SR ++VASL+D+ PNL G+ R C+V A + + D I ++ QF+ ++VTA+ W+P++
Sbjct: 1269 SRSDLIVVASLVDKAPNLGGICRLCDVLGAGLMTLHDLKIKNNAQFKTVAVTADYWMPMI 1328
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIH 1821
EV + I +L +KK +G++++GLEQT S+ L++ + FPKK++++LGREKEGIP +++
Sbjct: 1329 EVKPHQIVEYLHQKKADGYTLIGLEQTDKSVVLNKDLQFPKKSLILLGREKEGIPGELLA 1388
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+G+VRS+N+ + A+ + Y Q
Sbjct: 1389 ELDLCVEIKQVGIVRSMNIQTATAVIVHAYASQN 1422
>gi|401626403|gb|EJS44350.1| trm3p [Saccharomyces arboricola H-6]
Length = 1436
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDKGKSNEIVTRSDLIVVSSLVDKAPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ QF+ ++VTA++W+PI EVP+++I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKKHPQFKNVAVTADRWMPIKEVPLDNIATFMKEKKKEGYTLIGLEQTDKSVKLDNHF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GVVRS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGPLLSELDLCLEIQQFGVVRSMNIQTATAVIVHSYTVQH 1435
>gi|294659853|ref|XP_462280.2| DEHA2G17050p [Debaryomyces hansenii CBS767]
gi|199434283|emb|CAG90782.2| DEHA2G17050p [Debaryomyces hansenii CBS767]
Length = 1441
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++V+SL+D+ PNL G+ R C+V A L + D N+ + QF+ ++VTA+ W+P+VE
Sbjct: 1288 RSDLIVVSSLVDKPPNLGGICRLCDVLGAGLLTLNDINVKNHPQFKNVAVTADYWMPMVE 1347
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
V + I FL+ KK EG++++GLEQT S+ L+ + FP+K++++LGREKEG+P D++
Sbjct: 1348 VKPSEIICFLKEKKKEGYTLIGLEQTDKSVELNSDLKFPQKSLILLGREKEGVPGDLLAE 1407
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+GV+RS+N+ + AI + Y+ Q
Sbjct: 1408 LDFCVEIKQVGVIRSMNIQTATAIIVHAYSSQH 1440
>gi|50289637|ref|XP_447250.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526559|emb|CAG60183.1| unnamed protein product [Candida glabrata]
Length = 1420
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 126/207 (60%), Gaps = 15/207 (7%)
Query: 1649 KKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFV 1708
K ++ P +Q+ S S A++ +L+I+ Q RS +M R + +
Sbjct: 1226 KNVSNPNVTSQNALSDSLQTKSGAWETVLDID----------QKRSNSM----IKRSELI 1271
Query: 1709 LVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNS 1768
+V+SL+D+ PNL G+ R C+V L + D + + QF+ ++VTA+KW+P+ EVP++
Sbjct: 1272 VVSSLVDKPPNLGGICRLCDVLGVGLLTVQDLRVKNHPQFKNVAVTADKWMPMEEVPIDE 1331
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLD-QYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
I F++ KK EG++++GLEQT SI LD + FP K++++LG E GIP +++ LD C+
Sbjct: 1332 ISKFMKEKKKEGYTLIGLEQTDKSIKLDNNFKFPSKSLILLGTEAHGIPGHLLNELDLCL 1391
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
EI Q GV+RS+N+ + A+ + Y+ Q
Sbjct: 1392 EIKQHGVIRSMNIQTATAVIVHSYSAQ 1418
>gi|301095552|ref|XP_002896876.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
gi|262108626|gb|EEY66678.1| SpoU rRNA Methylase family [Phytophthora infestans T30-4]
Length = 664
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 106/170 (62%), Gaps = 9/170 (5%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA----DANILHDKQF 1748
R + + RQ ++ ASL+D++PNLAGLA A A DA H ++
Sbjct: 487 RGATLNARQRPRQPLIMCASLVDKVPNLAGLATDLRDLNAQETGRAEPADDAAGRHVREM 546
Query: 1749 QLISVTAEKWVPIVEVPVNSIKHFLER---KKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
+ TA KW+P+ + + + E +G++++ +EQTA+S+ L Y P+K V
Sbjct: 547 S--AATAHKWMPLERSATSKVTIYDEHLCDGSAKGYTIVAVEQTASSVSLASYTLPRKMV 604
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LVLGREKEGIPV+++ ++D C+EIPQ G+VRSLNVHVSGA+ LWEYT+QQ
Sbjct: 605 LVLGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGALVLWEYTQQQ 654
Score = 75.1 bits (183), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 180/431 (41%), Gaps = 43/431 (9%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEVWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDAY 1556
+ LD +
Sbjct: 393 LRRQARQLDEF 403
>gi|241954588|ref|XP_002420015.1| tRNA guanosine-2'-O-methyltransferase, putative; trna
guanosine-2'-o-methyltransferase trm3 (ec 2.1.1.34) (trna
[gm18 methyltransferase) (trna methylase 3) [Candida
dubliniensis CD36]
gi|223643356|emb|CAX42231.1| tRNA guanosine-2'-O-methyltransferase, putative [Candida dubliniensis
CD36]
Length = 1411
Score = 147 bits (371), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R + ++V+SL+D+ PNL G+ R C+V A L + D + + F+ ++VTA++W+P++E
Sbjct: 1258 RSELIVVSSLVDKPPNLGGICRLCDVLGAGLLTLHDIEVKNHINFKTVAVTADQWMPMIE 1317
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
V + +IK++L KK EG++++GLEQT SI L+ + FPKK+++++G+E+EGIP D++
Sbjct: 1318 VKMENIKNYLLDKKREGYTLIGLEQTDKSIELNNDLKFPKKSLILIGKEREGIPGDLLAE 1377
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+G+VRS+N+ + AI + Y+ Q
Sbjct: 1378 LDFCVEIKQVGIVRSMNIQTATAIIVHAYSSQH 1410
>gi|344231103|gb|EGV62985.1| hypothetical protein CANTEDRAFT_134828 [Candida tenuis ATCC 10573]
Length = 1389
Score = 147 bits (370), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 119/188 (63%), Gaps = 11/188 (5%)
Query: 1679 IEKEDELFDQVLQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCE 1728
I K + L LQ +S A T+ R ++V+SL+D+ PNL G+ R C+
Sbjct: 1201 INKHEMLNKNPLQTKSGAWSTVMDLDDSDKNTLVKRSDLIVVSSLVDKPPNLGGICRLCD 1260
Query: 1729 VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
V A L + D +I +F+ ++VTA+ W+P++EV V I FL +KK EG++++GLEQ
Sbjct: 1261 VLGAGLLTLHDISIKDHNEFRNVAVTADHWMPMIEVAVPDIVKFLRQKKKEGYTLIGLEQ 1320
Query: 1789 TANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIA 1847
T NS+ L+ + FP+K++++LG+E+EG+P +++ LD C+EI Q+GV+RS+N+ + AI
Sbjct: 1321 TDNSVELNSDLKFPQKSLILLGKEREGVPGELLAELDLCVEIKQVGVIRSMNIQTATAII 1380
Query: 1848 LWEYTRQQ 1855
+ Y+ Q
Sbjct: 1381 VQAYSSQH 1388
Score = 42.7 bits (99), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 1379 KVRAWQMI-CILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVA 1437
++R + +I CI+++ + +++ + F+ + L + P VR Y+E + + + L + +
Sbjct: 957 RIRVFTIIACIITKVNNTNLLEYLQQFIKL-LDSDPSPLVRIYIE-WIVALKLGDYTDLQ 1014
Query: 1438 EQLVPILRDY----DMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHH 1493
+QL LR +M+P + SY + I H Q ++LE LL ++P TS+
Sbjct: 1015 DQLFTDLRGLLDLKEMKPSLICSYQRVLVLFINHLPLEKQQQYLERLLLIVIPCATSNKA 1074
Query: 1494 SLRGFTQLLVYQVLCKLFPTLDFGTSQKMP 1523
++R F+ L+ C ++P ++ Q P
Sbjct: 1075 TVRHFSTSLI----CTVYPMMEEKHIQVAP 1100
>gi|82705756|ref|XP_727099.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482786|gb|EAA18664.1| Saccharomyces cerevisiae ORF 2310-related [Plasmodium yoelii yoelii]
Length = 777
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 108/152 (71%), Gaps = 1/152 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
+ +++ASLID++PNLAGL RTCE+F L +++ NI+ D QFQ IS TA KW+ I E
Sbjct: 626 KNNLIVIASLIDKVPNLAGLCRTCEIFNVKKLLLSNINIVKDFQFQKISSTANKWMNIQE 685
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ N I +L +KK + S++GLEQT +S L+ ++FP+ +L+LG EKEG+P I+ +L
Sbjct: 686 LKKNDIIKYLIKKKKKY-SIIGLEQTNDSKQLNDFIFPENCILILGDEKEGLPSSILLLL 744
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
C+EIP G++RSLNVHVS AI ++EY +Q
Sbjct: 745 HHCVEIPGHGIIRSLNVHVSAAITIYEYFKQH 776
>gi|448105751|ref|XP_004200571.1| Piso0_003162 [Millerozyma farinosa CBS 7064]
gi|448108859|ref|XP_004201202.1| Piso0_003162 [Millerozyma farinosa CBS 7064]
gi|359381993|emb|CCE80830.1| Piso0_003162 [Millerozyma farinosa CBS 7064]
gi|359382758|emb|CCE80065.1| Piso0_003162 [Millerozyma farinosa CBS 7064]
Length = 1456
Score = 146 bits (368), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Query: 1690 LQARSLAMETIRAS---------RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADA 1740
LQ +S A+ T+ + R ++V+SL+D+ PNL G+ R C+V A L + D
Sbjct: 1280 LQTKSGALNTLSENDTQEQHSVHRSDLIVVSSLVDKPPNLGGICRLCDVLGAGLLTLNDI 1339
Query: 1741 NILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM- 1799
+ QF+ ++VTA+ W+P+ EV I+ FL+ KK EG++++GLEQT S+ L+ +
Sbjct: 1340 RVKDHPQFKNVAVTADSWMPMKEVKEEGIRDFLKSKKSEGYTLIGLEQTDKSVELNSDLK 1399
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FP+K++++LG+E+EGIP D++ LD CIEI Q+GVVRS+N+ + AI + Y+ Q
Sbjct: 1400 FPQKSLILLGKEREGIPGDLLVELDMCIEIKQVGVVRSMNIQTATAIIVHAYSSQH 1455
>gi|448530591|ref|XP_003870101.1| Trm3 protein [Candida orthopsilosis Co 90-125]
gi|380354455|emb|CCG23970.1| Trm3 protein [Candida orthopsilosis]
Length = 1372
Score = 145 bits (367), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
+R ++VASL+D+ PNL G+ R +V A L I D +I QF+ ++VTA++W+P++
Sbjct: 1218 TRSDLIVVASLVDKPPNLGGICRLSDVLGAGLLTIHDMSISKHPQFKNVAVTADQWMPMI 1277
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIH 1821
EV +I+ +L KK EG++++GLEQT S+ L+ + FP+K++++LGRE+EGIP D++
Sbjct: 1278 EVAPENIRDYLLEKKKEGYTLIGLEQTDQSVELNNDLKFPQKSLILLGREREGIPGDLLA 1337
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+G+VRS+N+ + AI + Y+ Q
Sbjct: 1338 ELDFCVEIKQVGIVRSMNIQTATAIIVHAYSTQH 1371
>gi|401839764|gb|EJT42832.1| TRM3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1436
Score = 145 bits (366), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 115/177 (64%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKCNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+PI EV +++I F++ +K EG++++GLEQT S+ LD ++
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPIQEVALDNIASFMKERKKEGYTLIGLEQTDKSVKLDNRF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPK+++++LG E GIP ++ +LD C+EI Q GVVRS+N+ + A+ + YT Q
Sbjct: 1379 QFPKRSLILLGTEAFGIPGPLLSVLDLCLEIQQFGVVRSMNIQTATAVIVHSYTVQH 1435
>gi|385303948|gb|EIF47990.1| putative trna ribose methyltransferase [Dekkera bruxellensis
AWRI1499]
Length = 180
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 1689 VLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF 1748
VL A S R +++ASL+D+ PNL G+ R C+ A + + D + DK+F
Sbjct: 12 VLDADSQTRSMTNVKRSPLIVMASLVDKPPNLGGICRLCDCLGAGWMTMNDLKVKDDKRF 71
Query: 1749 QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLV 1807
++VTA++W+P +EV + I FL KK EG+S++GLEQT NS+ L + FP+K+++V
Sbjct: 72 LSVAVTADRWMPXLEVKQDDIVTFLRXKKLEGYSLIGLEQTDNSVELSXKLEFPEKSLIV 131
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LGRE+EGIP I+ +LD C+ I Q+G+VRS+N+ + A+ + Y+ Q
Sbjct: 132 LGREREGIPAKILSVLDFCVVIKQVGIVRSMNIQTATAVIVHAYSIQH 179
>gi|307104610|gb|EFN52863.1| hypothetical protein CHLNCDRAFT_138347 [Chlorella variabilis]
Length = 1710
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 98/134 (73%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
RQ+ ++VASL+ + PNLAGLARTCEVF+ASGL + + +F+ I+V+A W+P++E
Sbjct: 1471 RQELLVVASLLTKAPNLAGLARTCEVFRASGLVLPGLAVTRLPEFKSIAVSAHLWLPLIE 1530
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
VP + +L+R+ +G++++GLEQ+ S+ L + FP++TVLVLGREKEGIP ++ +L
Sbjct: 1531 VPEAMLAAWLQRQAAQGWTLVGLEQSTESVQLQDFRFPRRTVLVLGREKEGIPSALLGLL 1590
Query: 1824 DACIEIPQLGVVRS 1837
D +EIPQLG S
Sbjct: 1591 DHSVEIPQLGARSS 1604
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 201/507 (39%), Gaps = 107/507 (21%)
Query: 1144 SVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILH----ISCNKRRVAPIAALLS 1199
S R DL ASG S G+ + W L ++W + +RR AAL++
Sbjct: 991 SYRQPRDLTASGGG-----SSEGMAALVGW-LCSAAWRAYEGTATGSRRRRTGLTAALVA 1044
Query: 1200 SVLHYSVF------SEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLT 1253
+ LH ++F + E+H PL+ V ++L+ G++S R++ +L L GL
Sbjct: 1045 TCLHPALFDASADPARRELHA---AGAPLQQLVLRLLDAGSRSWRSMSTVSLQLCGLLTR 1101
Query: 1254 NPWIIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKT--EVSLLAKSPVPELTEAFIN 1311
+ + Y L+ L L+GS ++ ++ + D +T E++ L L EAF
Sbjct: 1102 HAELATQYSATLQQLLLWGSA--EDPGQSGEGDAVDGETAAELAALIAPGDAHLAEAFEA 1159
Query: 1312 TELYARVSVAVLFSKLADQTEIVGSAK---ECQDALDSGKLFLLGLLDFVVNDKDLAREL 1368
T+L RV+ + Q E A A ++G L LLD +D +L+
Sbjct: 1160 TKLAPRVAALCMLWSWVQQAEAEARASTIASAAPAREAGLLLWGQLLDLSASDPELSAAR 1219
Query: 1369 YKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITI 1428
+HR+KVR WQ +C+LS V + Q + +L R ++ +V+QY + A +
Sbjct: 1220 CTDLGKVHRKKVRLWQALCVLSPLVPAEQADQDFEAVLGALSRADMANVKQYQDACASVL 1279
Query: 1429 YLKFPSLVAEQLVPILRD---------------------YDMRPQALSSYVFIAANVILH 1467
+ P+L+ ++P LRD ++RP+ ++
Sbjct: 1280 LHRRPALLRSHVLPALRDCCSSASFALSSLILIAARAAAAELRPEGSAAGQAQPGE---- 1335
Query: 1468 ASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKS 1527
Q L +++ I P SH H+LR
Sbjct: 1336 ----SQGALLAEVVGSITPWSLSHVHALR------------------------------- 1360
Query: 1528 CFEDLKSYLAKNSDCTRLRASMSG--YLDAYDPNLSITPAVIFVNRDKELEFECVPTSLM 1585
+N D RLR +S Y D++D ++TPA I L+
Sbjct: 1361 ----------ENEDVNRLRRGLSQAFYFDSFDLAQAVTPAGILCKAG---------APLL 1401
Query: 1586 EQVLNFLNDVREDLRYSMAKDVVTIKN 1612
E+V +FL+ R+ LR + + V
Sbjct: 1402 EEVQSFLSVERQLLRQDLRQGKVATAT 1428
>gi|255721203|ref|XP_002545536.1| hypothetical protein CTRG_00317 [Candida tropicalis MYA-3404]
gi|240136025|gb|EER35578.1| hypothetical protein CTRG_00317 [Candida tropicalis MYA-3404]
Length = 1434
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 114/178 (64%), Gaps = 12/178 (6%)
Query: 1690 LQARSLAMETI-----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA 1738
LQ +S A TI R + ++V+SL+D+ PNL G+ R C+V A L +
Sbjct: 1256 LQTKSGAWNTIMEVDNDSSRIAEVERSELIVVSSLVDKPPNLGGICRLCDVLGAGLLTLH 1315
Query: 1739 DANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
D + F+ ++VTA+ W+P++EV + +I+ +L KK EG++++GLEQT S+ L+
Sbjct: 1316 DIEVKKHPHFKTVAVTADHWMPMIEVKMENIRDYLLDKKREGYTLIGLEQTDKSVELNND 1375
Query: 1799 M-FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ FPKK+++++G+E+EGIP D++ LD C+EI Q+G+VRS+N+ + AI + Y+ Q
Sbjct: 1376 LKFPKKSLILIGKEREGIPGDLLAELDFCVEIKQVGIVRSMNIQTATAIIVHAYSSQH 1433
>gi|354547843|emb|CCE44578.1| hypothetical protein CPAR2_403810 [Candida parapsilosis]
Length = 1372
Score = 144 bits (364), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++VASL+D+ PNL G+ R +V A L I D +I QF+ ++VTA++W+P++E
Sbjct: 1219 RSDLIVVASLVDKPPNLGGICRLSDVLGAGLLTIHDMSISKHPQFKNVAVTADQWMPMIE 1278
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
V +I+ +L KK EG++++GLEQT S+ L+ + FP+K++++LGRE+EGIP D++
Sbjct: 1279 VIPENIRDYLLEKKKEGYTLIGLEQTDQSVELNNDLKFPQKSLILLGREREGIPGDLLAE 1338
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+G+VRS+N+ + AI + Y+ Q
Sbjct: 1339 LDFCVEIKQVGIVRSMNIQTATAIIVHAYSSQH 1371
>gi|349576967|dbj|GAA22136.1| K7_Trm3bp, partial [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1232
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1055 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1114
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1115 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKEKKKEGYTLIGLEQTDKSVKLDNNF 1174
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1175 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1231
>gi|6320091|ref|NP_010171.1| Trm3p [Saccharomyces cerevisiae S288c]
gi|74627230|sp|Q07527.1|TRM3_YEAST RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase; AltName: Full=tRNA
methylase 3
gi|1431162|emb|CAA98680.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810924|tpg|DAA11748.1| TPA: Trm3p [Saccharomyces cerevisiae S288c]
gi|392300004|gb|EIW11095.1| Trm3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1436
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKEKKKEGYTLIGLEQTDKSVKLDNNF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|363750894|ref|XP_003645664.1| hypothetical protein Ecym_3359 [Eremothecium cymbalariae DBVPG#7215]
gi|356889298|gb|AET38847.1| Hypothetical protein Ecym_3359 [Eremothecium cymbalariae DBVPG#7215]
Length = 1409
Score = 144 bits (362), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
A++ +L+I+K+D ++ R + ++VASL+D+ PNL G+ R C+V
Sbjct: 1238 AWETILDIDKKDT--------------SVSVKRSELIVVASLVDKPPNLGGICRLCDVLG 1283
Query: 1732 ASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTAN 1791
L + D + + QF+ ++VTA+ W+P+ EV V I F+++KK EG++++GLEQT
Sbjct: 1284 VGLLTVQDIRVKNHPQFKNVAVTADHWMPMEEVQVECIIDFMKQKKSEGYTLIGLEQTDQ 1343
Query: 1792 SIPLDQ-YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
S+ LD Y FP K++++LG E EGIP ++ LD C+EI Q G++RS+N+ + A+ +
Sbjct: 1344 SVQLDHNYSFPTKSLILLGTEAEGIPGHLLSELDLCLEIKQSGIIRSMNIQTATAVVVHS 1403
Query: 1851 YTRQQ 1855
Y+ Q
Sbjct: 1404 YSAQH 1408
>gi|389602694|ref|XP_001567641.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505559|emb|CAM43084.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 2037
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 99/156 (63%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+R +Q ++V SL++ N+AGL R E+F + + D + F + +AE W+
Sbjct: 1873 LRTQKQSIIVVGSLLENPVNIAGLCRCGEIFAVQSIVVPDKRVFEHPHFVAAARSAELWI 1932
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
P EV + +LE + G+ V+G+EQTA S+ ++ + FPK+ +VLG E +G+P +
Sbjct: 1933 PWEEVMPKDLPCYLEGLRRRGYMVVGIEQTAASVSMEHFSFPKRCAVVLGAEGQGVPAPL 1992
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I +LD C+EIPQ G++RSLNVHV+GA+ ++EYTRQ
Sbjct: 1993 IPLLDVCVEIPQYGLIRSLNVHVAGAVIMYEYTRQH 2028
Score = 46.6 bits (109), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 145/366 (39%), Gaps = 66/366 (18%)
Query: 1172 MWHLVRSSWILHISCNKRRVAPIAALLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLE 1231
MW +R R+ +AAL +VLHY +M + PG +K + +VLE
Sbjct: 1345 MWEHMRE-------VGARQYTRLAALAFTVLHY---------VMPHHPGYVKEVLLRVLE 1388
Query: 1232 ----EGTKSPRTIRLAALHLTGLWLTNP---WIIKYYIKELKLLTLYGSVAFDEDFEAEL 1284
+ + R + A++ + L +P W + L+ + LY +V F+ + + E
Sbjct: 1389 VEGKDAQTADRDVYFASMTASLQVLHDPDNNWSV------LREVLLYTAVLFNTNRDEEE 1442
Query: 1285 AENYDAKTEVSLLAKSPVPELTEAFINTELYARVSVAVLFSKLADQTEIVGSAKECQDAL 1344
E+ A TE LL P L + T + V A+ + L C
Sbjct: 1443 NESTVAVTE-PLLWTWP-EALRLCYPPTTCMSAVGRAMAVATLL----------WCCHQN 1490
Query: 1345 DSGKLFLLG--LLDFVVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVT 1402
SG+ L LL + E S HR ++R WQ++C L + ++ T
Sbjct: 1491 VSGRAVPLTMELLRMNTCHPVVTHEPCMPNSRTHRTRMRLWQLLCALLPCLADEQSVPPT 1550
Query: 1403 HFLHI-------SLYRNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALS 1455
+ + L NN+ S+R+ +E + I + + PSL L L Y +RPQ
Sbjct: 1551 QVVEVFRVLVRHCLTVNNMGSIRRLMELYGIRLMEQRPSLYT-VLSEALGSYSLRPQVCG 1609
Query: 1456 SYVFIAANVILHASKAVQFRH---------------LEDLLPPIVPLLTSHHHSLRGFTQ 1500
SY+ IA + +L A + L P I+ TS+ H LR +
Sbjct: 1610 SYLLIACHSLLRQEGAGCIKESASATAGDEALASDIFTSLFPHILQQSTSNQHLLRIISH 1669
Query: 1501 LLVYQV 1506
+ ++ +
Sbjct: 1670 IGLFNI 1675
>gi|50308721|ref|XP_454364.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643499|emb|CAG99451.1| KLLA0E09197p [Kluyveromyces lactis]
Length = 1397
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+R + ++VASL+D+ PNL G+ R C+V + I D + QF+ ++VTA++W+PI
Sbjct: 1242 VARSELIVVASLVDKAPNLGGICRLCDVLGVGTMTIHDIRVKQHPQFKNVAVTADRWMPI 1301
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QYMFPKKTVLVLGREKEGIPVDII 1820
EVPV+ I ++ KK EG++++GLEQT +SI L+ ++ FP K+V++LG E GIP ++
Sbjct: 1302 EEVPVDGIISYMNAKKLEGYTLIGLEQTDSSIQLNSEFKFPSKSVILLGTEAHGIPGHLL 1361
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q GV+RS+N+ + A+ + Y+ Q
Sbjct: 1362 KELDLCLEIKQSGVIRSMNIQTATAVIVHSYSIQH 1396
>gi|365766434|gb|EHN07930.1| Trm3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1436
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKGKKKEGYTLIGLEQTDKSVKLDNSF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|207347023|gb|EDZ73341.1| YDL112Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1436
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKGKKKEGYTLIGLEQTDKSVKLDNNF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|254583948|ref|XP_002497542.1| ZYRO0F07942p [Zygosaccharomyces rouxii]
gi|238940435|emb|CAR28609.1| ZYRO0F07942p [Zygosaccharomyces rouxii]
Length = 1434
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+R ++VASL+D+ PNL G+ R C+V L + + + ++ QF+ ++VTA++W+PI
Sbjct: 1279 VNRSDLIVVASLVDKAPNLGGICRLCDVLGVGLLTVPNIKVKNNPQFKNVAVTADRWMPI 1338
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDII 1820
EV I F+++KK EG++++GLEQT S+ L D Y FP K+++VLG E GIP ++
Sbjct: 1339 EEVTPQDITSFMKQKKQEGYTLIGLEQTDKSVKLDDHYKFPAKSLVVLGTEAHGIPGHLL 1398
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1399 SELDLCLEIRQFGVIRSMNIQTATAVIVHSYTVQH 1433
>gi|190405115|gb|EDV08382.1| hypothetical protein SCRG_00607 [Saccharomyces cerevisiae RM11-1a]
gi|259145133|emb|CAY78397.1| Trm3p [Saccharomyces cerevisiae EC1118]
Length = 1436
Score = 143 bits (361), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKGKKKEGYTLIGLEQTDKSVKLDNSF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|151941891|gb|EDN60247.1| Gm18 tRNA methyltransferase [Saccharomyces cerevisiae YJM789]
Length = 1436
Score = 143 bits (361), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKGKKKEGYTLIGLEQTDKSVKLDNSF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|1199536|emb|CAA64900.1| ORF 2310 [Saccharomyces cerevisiae]
gi|1903285|emb|CAA98679.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 482
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 305 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQD 364
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 365 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKEKKKEGYTLIGLEQTDKSVKLDNNF 424
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 425 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 481
>gi|70944707|ref|XP_742256.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521130|emb|CAH74309.1| hypothetical protein PC000031.00.0 [Plasmodium chabaudi chabaudi]
Length = 867
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
+ +++ASLID++PNLAGL RTCE+F L +++ NI+ D QFQ IS TA KW+ I E
Sbjct: 721 KNNLIVIASLIDKVPNLAGLCRTCEIFNVKKLLLSNINIVKDFQFQKISSTANKWMNIQE 780
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ KK + +S++GLEQT +S L+ ++FP+K +L+LG EKEG+P I+ +L
Sbjct: 781 LKK-KDIIKYLIKKKKKYSIIGLEQTNDSKRLNDFIFPEKCILILGDEKEGLPSSILLLL 839
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEY 1851
C+EIP G++RSLNVHVS AI ++EY
Sbjct: 840 HHCVEIPGHGIIRSLNVHVSAAITIYEY 867
>gi|255716658|ref|XP_002554610.1| KLTH0F09350p [Lachancea thermotolerans]
gi|238935993|emb|CAR24173.1| KLTH0F09350p [Lachancea thermotolerans CBS 6340]
Length = 1396
Score = 143 bits (360), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 1687 DQVLQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
D LQ +S A ET+ R +++ASL+D+ PNL G+ R C+V A L
Sbjct: 1216 DSPLQTKSGAWETVMDIDNQSSAVTVKRSPLIVIASLVDKAPNLGGICRLCDVLGAGLLT 1275
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+ D I + QF+ ++VTA++W+P+ V I F+ KK EG++++GLEQT SI LD
Sbjct: 1276 VHDIRIKNHPQFKSVAVTADRWMPMEAVTTQDITKFMRSKKQEGYTLIGLEQTDKSIQLD 1335
Query: 1797 -QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++ FP K++++LG E EGIP ++ LD C+EI Q GV+RS+N+ + A+ + Y+ Q
Sbjct: 1336 NKFQFPPKSLILLGTESEGIPGHLLSELDLCLEIKQSGVIRSMNIQTATAVIVHAYSAQH 1395
>gi|256274094|gb|EEU09005.1| Trm3p [Saccharomyces cerevisiae JAY291]
Length = 1436
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETIR----------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ +R + ++V+SL+D+ PNL G+ R C+V L + D
Sbjct: 1259 LQTKSGAWETVLDLDNKKSNDVVTRSELIVVSSLVDKPPNLRGICRLCDVLGVGLLTVQD 1318
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
+ + QF+ ++VTA++W+P+ EV ++ I F++ KK EG++++GLEQT S+ LD +
Sbjct: 1319 IKVKNHPQFKNVAVTADRWMPMEEVALDEIASFMKGKKKEGYTLIGLEQTDKSVKLDNSF 1378
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1379 QFPKKSLILLGTEAFGIPGTLLSELDLCLEIQQFGVIRSMNIQTATAVIVHSYTVQH 1435
>gi|149237384|ref|XP_001524569.1| hypothetical protein LELG_04541 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452104|gb|EDK46360.1| hypothetical protein LELG_04541 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 934
Score = 142 bits (357), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
SR ++VASL+D+ PNL G+ R +V L I D + QF+ ++VTA++W+P+
Sbjct: 780 SRSDLIVVASLVDKPPNLGGICRLSDVLGVGLLTIHDMEVAKHPQFKNVAVTADQWMPMH 839
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIH 1821
EV IK++L KK +G++++GLEQT S+ L++ + FPKK++++LG+EKEGIP +++
Sbjct: 840 EVKPEEIKNYLLEKKRDGYTLIGLEQTDKSVQLNKNLEFPKKSLILLGKEKEGIPGELLA 899
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+G++RS+N+ + AI + Y+ Q
Sbjct: 900 ELDFCVEIKQVGIIRSMNIQTAAAIIVHAYSSQH 933
>gi|326429925|gb|EGD75495.1| hypothetical protein PTSG_06570 [Salpingoeca sp. ATCC 50818]
Length = 1687
Score = 141 bits (355), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 224/510 (43%), Gaps = 60/510 (11%)
Query: 1376 HRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSL 1435
HR K R WQ++ +++ +D+ + SVR Y+ + + ++L L
Sbjct: 1208 HRSKHRCWQVLVLMADRGTDDVKDALLRRCLARFTSERHHSVR-YMIEWCLMLFLAEGRL 1266
Query: 1436 VAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLED---LLPPIVPLLTSHH 1492
E L + + + R + S + + V+ A + + LE LL +PL + H
Sbjct: 1267 SFESLANMDTNAEARVAHICSVLTVMWRVV-DAYRPRDSKWLEMCSFLLQFSLPLSLTIH 1325
Query: 1493 HSLRGFTQLLVYQVLCKLFPTLDFGTSQKMP--LEKSCFEDLKSYLAKNSDC----TRLR 1546
+ R ++ Y V+ L T D G + L + K++L SD T LR
Sbjct: 1326 MTARLYSSTTFYSVIRLLEQTRDEGNGLDIESVLRDPYLQRTKAFLEHESDVFKYVTGLR 1385
Query: 1547 ASMSGYLDAYDP--------NLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVRED 1598
A + +DP N + P + + D+ L + E+ L
Sbjct: 1386 ADF--FFSTFDPIHDTSLEFNFTEGPVLFGLAADEALSSPLIRQFSDERALGKWAAPARA 1443
Query: 1599 LRYSMAKDVVTIKNESLKIGEDP---------DCAETLSDLDKEESFSQLPKDSLLDFQK 1649
+ + K E ++GED D E D EE L D D QK
Sbjct: 1444 KAADALIGMRS-KQEVRRMGEDESEEVDAIGNDGDEQGVGDDNEEGDGAL--DMGADIQK 1500
Query: 1650 KITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQ--QF 1707
KI D S+ + +DE+ A + A A+RQ +
Sbjct: 1501 KI--------DPSAL--------------LAAQDEV---AFGAENAAQSQRHATRQRSKL 1535
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
V+VASLI NL GL+RTCE+F L +A K+F+ +SVT+E+W V
Sbjct: 1536 VVVASLISLGTNLGGLSRTCEIFNVGMLVLAAEKYTRTKEFRALSVTSERWQHFEFVEPA 1595
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
++ +L K +G++++G+EQTA+S+ L Q FP+ TVL+LG E +GIP D++ D +
Sbjct: 1596 NLTEWLRSMKQQGYTIVGVEQTADSVSLPQVKFPEYTVLLLGDEAKGIPADLLTETDVNV 1655
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
EIPQ GV RSLNVHVS ++ +++Y Q F
Sbjct: 1656 EIPQKGVTRSLNVHVSASLLIYKYAEQHVF 1685
>gi|68074789|ref|XP_679311.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500033|emb|CAH94615.1| hypothetical protein PB000715.00.0 [Plasmodium berghei]
Length = 494
Score = 141 bits (355), Expect = 4e-30, Method: Composition-based stats.
Identities = 124/430 (28%), Positives = 207/430 (48%), Gaps = 68/430 (15%)
Query: 1477 LEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYL 1536
L LL IV L +SH +R +Q ++Y L K +K L + ++
Sbjct: 81 LTKLLLKIVLLCSSHSALIRSISQYILYNFLKK----------RKEMLLIPFLSKIYLFI 130
Query: 1537 AKNSDCTRLRASMSGYLDAYDPNL------------SITPAVIFVNRDKELEFECVPTSL 1584
N DC R+R + +D ++ + + F + D C T+
Sbjct: 131 KNNKDCKRIRDKLKKEFKNWDTSIIEQKNNICMLLPTYNHSFNFFDED----INCENTNT 186
Query: 1585 MEQVL---------NFLNDVREDLRYSMA------------KDVVTIK--NESLKI---- 1617
+L F++ +++ ++ M KD ++I N K+
Sbjct: 187 FTHILYNNELVSSYTFIDSIKKIVQQEMTSIMYNIQLEKEKKDGISIYKYNNEQKLLTLN 246
Query: 1618 ----GEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKIT--LPKHENQDNSSSSFFGNRE 1671
G++ D E S +D + L ++ + +KK T + E N SS +
Sbjct: 247 QFYHGKNVD--EISSTIDDKRDTKILASENGQEKKKKTTSQIINGEACFNKSSENIDYDK 304
Query: 1672 AYKQLLEIEKED--ELFDQVLQARSLAMETIRA----SRQQFVLVASLIDRIPNLAGLAR 1725
++ L+ K++ + FD + + E + + +++ASLID++PNLAGL R
Sbjct: 305 NFENFLKQTKKNYQKKFDPIDNIIEINNEFRKKYQLRKKNNLIVIASLIDKVPNLAGLCR 364
Query: 1726 TCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLG 1785
TCE+F L +++ NI+ D QFQ IS TA KW+ I E+ I +L +KK + +S++G
Sbjct: 365 TCEIFNVKKLLLSNINIVKDFQFQKISSTANKWMNIQELKKKDIIKYLIKKKKK-YSIIG 423
Query: 1786 LEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGA 1845
LEQT +S L+ ++FP+ +L+LG EKEG+P I+ +L C+EIP G++RSLNVHVS A
Sbjct: 424 LEQTNDSKRLNDFIFPENCILILGDEKEGLPSSILLLLHHCVEIPGHGIIRSLNVHVSAA 483
Query: 1846 IALWEYTRQQ 1855
I ++EY +Q
Sbjct: 484 ITIYEYFKQH 493
>gi|50550413|ref|XP_502679.1| YALI0D10989p [Yarrowia lipolytica]
gi|49648547|emb|CAG80867.1| YALI0D10989p [Yarrowia lipolytica CLIB122]
Length = 1383
Score = 140 bits (352), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ +R + +LVASL+D+ PNL G+ R +V A L + D ++ QF+ ++VTA++W+P
Sbjct: 1226 KINRGELILVASLVDKPPNLGGICRLSDVLGAQLLTLNDISVAKHPQFKNVAVTADQWMP 1285
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-YMFPKKTVLVLGREKEGIPVDI 1819
+ EV V+ I F+ KK EG++++GLEQT S L++ ++FPKK++++LG E+EGIP ++
Sbjct: 1286 MAEVKVDEIAEFMRAKKREGYTLIGLEQTDQSKQLNKDFVFPKKSLILLGMEREGIPGNL 1345
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ LD +EI Q+G++RS+N+ + A+ + Y+ Q
Sbjct: 1346 LAELDYAVEIKQIGMIRSMNIQTAAAVIVHAYSMQH 1381
>gi|403213717|emb|CCK68219.1| hypothetical protein KNAG_0A05550 [Kazachstania naganishii CBS 8797]
Length = 1421
Score = 140 bits (352), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ R ++VASL+D+ PNL G+ R C+V A L I D
Sbjct: 1244 LQTKSGAWETVLDLNNKKSTDTVKRSSLIVVASLVDKPPNLGGICRLCDVLGAELLTIQD 1303
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-Y 1798
QF+ ++VTA+KW+P+ EVPVN I F++ KK EG++++GLEQT S+ LD Y
Sbjct: 1304 IRAKKHPQFKNVAVTADKWMPMQEVPVNDIASFMKEKKGEGYTLIGLEQTDKSVKLDNDY 1363
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E GIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1364 HFPKKSLILLGTEAHGIPGHLLEELDLCLEIKQFGVIRSMNIQTATAVIVHSYTVQH 1420
>gi|374107014|gb|AEY95922.1| FADL294Cp [Ashbya gossypii FDAG1]
Length = 1372
Score = 138 bits (348), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 108/177 (61%), Gaps = 11/177 (6%)
Query: 1690 LQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
LQ +S A ET+ R V+VASL+D+ PNL G+ R +V + + D
Sbjct: 1195 LQTKSGAWETVLDFDNKTPQEAVKRSDLVVVASLVDKPPNLGGICRLSDVLGVGVMTVHD 1254
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD-QY 1798
+ QF+ ++VTA++W+PI EV V I F+ +KK EG++++GLEQT S+ LD +
Sbjct: 1255 RRVKSHPQFKNVAVTADRWMPIEEVAVADIASFMRQKKLEGYTLIGLEQTDKSVQLDTSF 1314
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
FPKK++++LG E EGIP ++ LD C+EI Q GV+RS+N+ + A+ + YT Q
Sbjct: 1315 RFPKKSLILLGTEAEGIPGYLLVELDMCLEIKQHGVIRSMNIQTATAVVVHSYTIQH 1371
>gi|328352676|emb|CCA39074.1| hypothetical protein PP7435_Chr3-0102 [Komagataella pastoris CBS
7435]
Length = 1457
Score = 138 bits (348), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R +++ASL+D+ PNL G+ R +V A L + D + QF+ ++VTA+KW+P+ E
Sbjct: 1304 RSDLIVMASLVDKPPNLGGICRLSDVLGAGLLTLDDMRVKEHIQFKNVAVTADKWMPLEE 1363
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDIIHM 1822
V +I F+ RKK +G++++GLEQT +S+ L+ + FPKK+++VLG EKEGIP I+
Sbjct: 1364 VKKENIIGFMLRKKKQGYTLIGLEQTDDSVELNSELKFPKKSLIVLGMEKEGIPSSILAE 1423
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EI Q+GV+RS+N+ + A+ + Y Q
Sbjct: 1424 LDFCVEIKQVGVIRSMNIQTATAVIVHAYAIQH 1456
>gi|345570989|gb|EGX53804.1| hypothetical protein AOL_s00004g463 [Arthrobotrys oligospora ATCC
24927]
Length = 1514
Score = 137 bits (344), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 213/484 (44%), Gaps = 59/484 (12%)
Query: 1378 RKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVA 1437
+K + Q + +L RF+ D + ++L R P + LE A L+FP+L +
Sbjct: 1078 KKTQQLQAVLLLERFITEDDADDHLEAIFVALSREANPRYKFLLEWMAFRCILRFPNLRS 1137
Query: 1438 EQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRG 1497
D P S + +A + +H A Q + DL+ +P TS+ ++R
Sbjct: 1138 VVWERFETTEDDIPSYKVSLLRLAYLISVHIQDAEQEQFFTDLVTRAIPCATSNKVTIRH 1197
Query: 1498 FTQLLVYQVLCKLFPTLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRLRASM-SGYLDAY 1556
L+ + L + L + T + P+ KS ++ + T R M D++
Sbjct: 1198 EGAELIPK-LYEEATKLGYTTLIENPMFKSIYDYIMG--------TPYRKVMVPSPTDSF 1248
Query: 1557 DP--NLSITPAVIFVNRDKELEFECVPTSLMEQVLNFLNDVREDLRYSMAKDVVTIKNES 1614
DP + S+ + + + +P E +F D K
Sbjct: 1249 DPVQDFSLVGVLAGSYICCDGGGDIIPLFFAEDFASFDADT---------------KTHY 1293
Query: 1615 LKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLP-KHENQDNSSSSFFGNREAY 1673
L IG +P E + S PK++ Q T P + + D S ++A+
Sbjct: 1294 LPIGTNPPPF-------SESTSSTNPKETADKPQSSTTGPIQTKGGDWDIKSLLSRQDAF 1346
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKAS 1733
Q+R + R Q +VASL+D NL G+ R CE+
Sbjct: 1347 -----------------QSR----HSTRRQAHQIDVVASLVDNHYNLGGICRVCELSGVQ 1385
Query: 1734 GLAIAD-ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANS 1792
+ + + A L K+F +SV++E W+PI EV ++ L +++ +G++++G+EQT S
Sbjct: 1386 KMYMGNKATALKAKEFTSVSVSSEHWLPIEEVKKQEVRELLAKRRQDGYTIVGIEQTDRS 1445
Query: 1793 IPL--DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
I L ++FP KTVLV+G EK GIP +++ +D C+E+ Q G RS+NV + A+ L+E
Sbjct: 1446 IILGTKDFVFPLKTVLVIGAEKTGIPPELLVEMDICVEVKQFGETRSMNVQTATAVVLYE 1505
Query: 1851 YTRQ 1854
Y RQ
Sbjct: 1506 YVRQ 1509
>gi|323453231|gb|EGB09103.1| hypothetical protein AURANDRAFT_25148, partial [Aureococcus
anophagefferens]
Length = 155
Score = 136 bits (342), Expect = 1e-28, Method: Composition-based stats.
Identities = 71/144 (49%), Positives = 92/144 (63%), Gaps = 3/144 (2%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
V+ ASL+D+ PNLAGL RT EVF L + D K+F+ I+VTAE+W+ V
Sbjct: 1 LVVCASLVDKAPNLAGLCRTAEVFACEKLVLPDDRCARTKEFKAIAVTAERWIATEAVAP 60
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
++ +L K G++V+ LEQ NS L P VL+LGREKEG+P D++ + D
Sbjct: 61 RDLRPWLLGLKARGYAVVALEQATNSTSLAGDAELPSPAVLLLGREKEGVPGDLMDLCDV 120
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALW 1849
C+EIPQLGVVRSLNVHVSG ALW
Sbjct: 121 CVEIPQLGVVRSLNVHVSG--ALW 142
>gi|406606284|emb|CCH42275.1| tRNA guanosine-2'-O-methyltransferase TRM3 [Wickerhamomyces ciferrii]
Length = 1353
Score = 135 bits (339), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 102/156 (65%), Gaps = 1/156 (0%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ R + ++++SL+D+ PNL G+ R C+V A + + D + QF+ ++VTA+ +P
Sbjct: 1193 KVKRSELIVISSLVDKPPNLGGICRLCDVLGAGLMTVDDLRVKKHPQFKNVAVTADYHMP 1252
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM-FPKKTVLVLGREKEGIPVDI 1819
I EV + I F++ KK EG++++GLEQT S L + FP K+V++LG+E EGIP ++
Sbjct: 1253 ITEVKIEDIPQFMKEKKREGYTLIGLEQTDQSQVLGKDTEFPAKSVILLGKEAEGIPGEL 1312
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ LD CIEI Q+GV+RS+N+ + A+ + Y+ Q
Sbjct: 1313 LAELDYCIEIRQVGVIRSMNIQTATAVIVHAYSSSQ 1348
>gi|341880020|gb|EGT35955.1| hypothetical protein CAEBREN_17544 [Caenorhabditis brenneri]
Length = 1237
Score = 134 bits (338), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 104/166 (62%), Gaps = 1/166 (0%)
Query: 1693 RSLAMET-IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI 1751
R + ET ++ ++VASL+D+ NL G+ RT E+F L +ADA + D F+ +
Sbjct: 1069 RKIVKETEVKDDGISLIVVASLVDKPNNLGGICRTSEIFGVDTLVVADALVAQDSNFKAL 1128
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S+++E W I V ++ +L+ + G++V+ EQT +SI + ++FPKK V+V+G E
Sbjct: 1129 SMSSENWQKIEAVKPANLLEYLQNLRSNGYTVIAAEQTTDSIMMHDFVFPKKAVIVMGDE 1188
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
KEG+PV ++ +D +EI Q+G RSLNVHV+ A+ + ++ Q RF
Sbjct: 1189 KEGVPVSLLRAVDQTVEIKQVGHTRSLNVHVTAALMIAKFAEQVRF 1234
>gi|302307217|ref|NP_983802.2| ADL294Cp [Ashbya gossypii ATCC 10895]
gi|299788893|gb|AAS51626.2| ADL294Cp [Ashbya gossypii ATCC 10895]
Length = 1372
Score = 134 bits (337), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETI----------RASRQQFVLVASLIDRIPNLAGL 1723
+Q+ E + D LQ +S ET+ R ++VASL+D+ PNL G+
Sbjct: 1179 RQIQEERSVETKRDSPLQTKSGTWETVLDFDSNTPQDAVKRSDLIVVASLVDKPPNLGGI 1238
Query: 1724 ARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSV 1783
R +V + + D + QF+ ++VTA++W+PI EV V I F+ +KK EG+++
Sbjct: 1239 CRLSDVLGVGLMTVHDLRVKSHPQFKNVAVTADRWMPIEEVAVADIASFMRQKKLEGYTL 1298
Query: 1784 LGLEQTANSIPLD-QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHV 1842
+GLEQT S+ LD + FP+K++++LG E EGIP ++ LD C+EI Q GV+RS+N+
Sbjct: 1299 IGLEQTDKSVRLDAAFHFPRKSLILLGTEAEGIPGYLLVELDMCLEIKQHGVIRSMNIQT 1358
Query: 1843 SGAIALWEYTRQQ 1855
+ A+ + Y Q
Sbjct: 1359 ATAVVVHSYAVQH 1371
>gi|170584264|ref|XP_001896925.1| RNA methyltransferase, TrmH family protein [Brugia malayi]
gi|158595702|gb|EDP34233.1| RNA methyltransferase, TrmH family protein [Brugia malayi]
Length = 1402
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 1656 HENQDNSSS--SFFGNREAYKQLLEIEKEDELFD-QVLQARSLAMETIRASRQ--QFVLV 1710
H + DN + SF + ++ +I + D L D V+Q + A+ RA + ++V
Sbjct: 604 HRDSDNLNQYPSFVFGQTQVQRHQQIREPDGLSDISVIQRKFNAVSVNRALLEGVSLIVV 663
Query: 1711 ASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIK 1770
ASL+D+ NL G+ RTCEV L +AD + D+ F +S+++E W+ + E +
Sbjct: 664 ASLLDKAANLGGICRTCEVLGVEKLIVADLAKIKDRDFMALSLSSENWMNLEESRPEELP 723
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+ L ++ G+ ++G EQT NS PL + FP K VL+LG EKEGIP+ ++ LD +E+
Sbjct: 724 NLLLSFRNSGYVIIGAEQTTNSTPLHKIRFPSKMVLLLGNEKEGIPMHLLGYLDKTVEVL 783
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
Q+G RSLNVHV+GA+ ++ R
Sbjct: 784 QIGHTRSLNVHVTGALLIYRKNNDAR 809
>gi|71403879|ref|XP_804694.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867801|gb|EAN82843.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 299
Score = 132 bits (333), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
Query: 1690 LQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
L R+L E RQ ++++SL+ N+AGL R E+F + ++D + F
Sbjct: 133 LHPRALKQE----KRQPLIVLSSLLQNPVNVAGLFRCGEIFAIEKVVVSDQAVFAHPHFV 188
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+ +AE W+P V ++ +L + +G++++G+EQTA S+ + Y FP++ ++LG
Sbjct: 189 AAARSAELWMPWDAVMAKNLPEYLGSLRQDGYTLIGIEQTAGSVSIASYRFPERAAILLG 248
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E G+P +++ +LD C+EIPQ G++RSLNVHV+GA+ ++EYTRQ
Sbjct: 249 AEGHGVPAELLPVLDVCVEIPQFGLIRSLNVHVTGALVMYEYTRQH 294
>gi|357603610|gb|EHJ63848.1| hypothetical protein KGM_16898 [Danaus plexippus]
Length = 1021
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1726 TCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEV-PVNSIKHFLERKKHEGFSVL 1784
T EVF + L ++ FQ +SV+AE+W+ + EV P +K +L KK EG V+
Sbjct: 889 TGEVFGVHTYVMDSLRHLQNRMFQDLSVSAERWLNVEEVRPGEPLKRYLMTKKAEGHIVV 948
Query: 1785 GLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSG 1844
EQT+NS+ L + FPKKT+L+LG EKEG+ +++ + DAC+E+PQ GVVRSLNVHV+
Sbjct: 949 AAEQTSNSVKLQHFKFPKKTILMLGHEKEGVSCELLPLCDACVEVPQRGVVRSLNVHVTA 1008
Query: 1845 AIALWEYTRQQ 1855
A+ +WEYTRQ
Sbjct: 1009 ALFVWEYTRQH 1019
>gi|308502598|ref|XP_003113483.1| hypothetical protein CRE_26502 [Caenorhabditis remanei]
gi|308263442|gb|EFP07395.1| hypothetical protein CRE_26502 [Caenorhabditis remanei]
Length = 1229
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 107/175 (61%)
Query: 1683 DELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI 1742
+E+ Q + + ++ ++VASL+D+ NL G+ RT E+F L +AD +
Sbjct: 1052 EEVVTSSFQRKIVKDSEVKDDGVSLIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLV 1111
Query: 1743 LHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
D F+ +S+++E W I V ++ +L+ + +G++V+ EQT +S+ + ++FPK
Sbjct: 1112 AQDSNFKALSMSSENWQKIEGVKPANLLEYLQGLRSQGYTVIAAEQTTDSVMMHNFVFPK 1171
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
K V+V+G EKEG+PV+++ +D +EI Q+G RSLNVHV+ A+ + ++ Q RF
Sbjct: 1172 KAVIVMGDEKEGVPVNLLRAVDQTVEIKQVGHTRSLNVHVTAALMIAKFAEQVRF 1226
>gi|324501288|gb|ADY40576.1| Methyltransferase TARBP1 [Ascaris suum]
Length = 1251
Score = 132 bits (331), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 6/207 (2%)
Query: 1657 ENQDNSSSSFF-GNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQ-----FVLV 1710
E +NS S + G + + Q ++++D+ ++ + + R ++ ++V
Sbjct: 1044 EEFNNSPSLIYSGPVKQFGQRDRVDEDDDTVEEADEPLQRKLNVFRGKWKRPEGTSLIVV 1103
Query: 1711 ASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIK 1770
A+L+ + NL GL RT E+F A L +A++ I+ D+ F+ +S+++E W+ I +V +
Sbjct: 1104 ATLVKKPANLGGLCRTSEIFGAEKLVLANSRIVEDRTFKSLSLSSENWIEIEQVTACELL 1163
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+L++ + G+ ++ EQT NS + FP+K VL+LG EKEGIPV+ I +D +EI
Sbjct: 1164 DYLDKMRKMGYKIIAAEQTTNSKSFAMFRFPRKCVLLLGDEKEGIPVEYIRYVDHSVEIA 1223
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Q+G RSLNVHV+GA+ + ++ F
Sbjct: 1224 QVGQTRSLNVHVTGALFIHKFAEDNYF 1250
>gi|193204953|ref|NP_495375.3| Protein T14B4.1 [Caenorhabditis elegans]
gi|351050680|emb|CCD65279.1| Protein T14B4.1 [Caenorhabditis elegans]
Length = 1225
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 98/151 (64%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+D+ NL G+ RT E+F L +AD + D F+ +S+++E W I V
Sbjct: 1072 LIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLVAQDANFKALSMSSENWQKIEGVKR 1131
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ +L+ + G++V+ EQT +S+ + ++FPKK V+V+G EKEG+PV+++ +D
Sbjct: 1132 TNLLPYLQNLRANGYTVIAAEQTTDSVMMHDFVFPKKAVIVMGDEKEGVPVNLLRAVDQT 1191
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+EI Q+G RSLNVHV+ A+ + ++ Q RF
Sbjct: 1192 VEIKQVGHTRSLNVHVTAALMIAKFAEQVRF 1222
>gi|7507813|pir||T28895 hypothetical protein T14B4.1 - Caenorhabditis elegans
Length = 1203
Score = 131 bits (329), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 98/151 (64%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+D+ NL G+ RT E+F L +AD + D F+ +S+++E W I V
Sbjct: 1050 LIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLVAQDANFKALSMSSENWQKIEGVKR 1109
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ +L+ + G++V+ EQT +S+ + ++FPKK V+V+G EKEG+PV+++ +D
Sbjct: 1110 TNLLPYLQNLRANGYTVIAAEQTTDSVMMHDFVFPKKAVIVMGDEKEGVPVNLLRAVDQT 1169
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+EI Q+G RSLNVHV+ A+ + ++ Q RF
Sbjct: 1170 VEIKQVGHTRSLNVHVTAALMIAKFAEQVRF 1200
>gi|253742338|gb|EES99175.1| TAR RNA loop binding protein, putative [Giardia intestinalis ATCC
50581]
Length = 1676
Score = 131 bits (329), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 98/152 (64%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+ ++ ASL+D+ NL GLART E+F L + +A+ D F+ +S+TA+ W+ I EV
Sbjct: 1515 KLIINASLLDKTTNLGGLARTAEIFGLESLVLGNASFATDPSFKAMSMTADMWLKIEEVQ 1574
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+ + ++ KK +G+S++ LEQ++ S+ L P+K VLVLG E+ G P +I+ + D
Sbjct: 1575 PHRLIQWIAEKKKDGYSIVCLEQSSRSVYLQDAELPQKAVLVLGNERNGCPEEILSLCDM 1634
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+EI Q+G RSLNVHVS AI +W++ Q RF
Sbjct: 1635 TVEIQQIGNTRSLNVHVSCAIFIWKWACQHRF 1666
>gi|449301813|gb|EMC97822.1| hypothetical protein BAUCODRAFT_405240 [Baudoinia compniacensis UAMH
10762]
Length = 861
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R V++ASL+D NL G+AR E+F AS + + + N+ +K F +SV++ PI++
Sbjct: 701 RNSIVVIASLVDNPYNLGGIARVAEIFGASEMHLQNQNVTSNKDFTSVSVSSHLHFPILQ 760
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPL--DQYMFPKKTVLVLGREKEGIPVDIIH 1821
+ +++ +L ++ EG+ V+G+EQT S+ L D P++ VLVLG EKEGIP ++
Sbjct: 761 LSASAVPTYLHERRAEGWVVVGIEQTDRSLLLGSDACKLPERIVLVLGGEKEGIPALVLA 820
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D +EIPQ G+ RSLNV + +I L+EY+RQ R
Sbjct: 821 ECDMLVEIPQQGITRSLNVQTAASIVLYEYSRQHR 855
>gi|159113391|ref|XP_001706922.1| TAR RNA loop binding protein, putative [Giardia lamblia ATCC 50803]
gi|157435023|gb|EDO79248.1| TAR RNA loop binding protein, putative [Giardia lamblia ATCC 50803]
Length = 1127
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 97/152 (63%)
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP 1765
++ ASL+D+ NL GLART EVF L + + + D F+ +S+TA+ W+ I EV
Sbjct: 972 NLIINASLLDKTTNLGGLARTAEVFGLDTLVLGNTSFALDPSFKAMSMTADMWLNIEEVQ 1031
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
++ ++ KK + +SV+ LEQ++ S+ L P+K VLVLG E++G P +I+ + D
Sbjct: 1032 PCNLVQWIAEKKKDDYSVVCLEQSSRSVYLQDADLPRKAVLVLGNERKGCPEEILSLCDM 1091
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+EI QLG +RSLNVHVS AI +W++ Q RF
Sbjct: 1092 TVEIQQLGNIRSLNVHVSCAIFVWKWACQHRF 1123
>gi|312067485|ref|XP_003136765.1| hypothetical protein LOAG_01177 [Loa loa]
Length = 612
Score = 127 bits (318), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 92/145 (63%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+D+ NL G+ RTCEV L +AD + + D+ F +S+++E W+ + +
Sbjct: 459 LIVVASLLDKAANLGGICRTCEVLGVEKLIVADLSKIKDRNFMALSMSSENWMNLEQSRP 518
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ + L + G+ ++G EQT NS PL + P K VL+LG EK GIP+D++ LD
Sbjct: 519 EELSNLLLSFRDSGYVIIGAEQTTNSTPLHKIRLPSKMVLLLGNEKGGIPMDLLGYLDKT 578
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEY 1851
+E+ Q+G RSLNVHV+GA+ ++ +
Sbjct: 579 VEVVQIGHTRSLNVHVTGALFIYRF 603
>gi|393912250|gb|EJD76655.1| RNA methyltransferase [Loa loa]
Length = 1239
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 92/145 (63%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+D+ NL G+ RTCEV L +AD + + D+ F +S+++E W+ + +
Sbjct: 1086 LIVVASLLDKAANLGGICRTCEVLGVEKLIVADLSKIKDRNFMALSMSSENWMNLEQSRP 1145
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ + L + G+ ++G EQT NS PL + P K VL+LG EK GIP+D++ LD
Sbjct: 1146 EELSNLLLSFRDSGYVIIGAEQTTNSTPLHKIRLPSKMVLLLGNEKGGIPMDLLGYLDKT 1205
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEY 1851
+E+ Q+G RSLNVHV+GA+ ++ +
Sbjct: 1206 VEVVQIGHTRSLNVHVTGALFIYRF 1230
>gi|452986332|gb|EME86088.1| hypothetical protein MYCFIDRAFT_99405, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 350
Score = 123 bits (309), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
Query: 1688 QVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
Q A L+ +R ++VASL+D NL GL+R E+F A L + + +K
Sbjct: 180 QTKGAGYLSSSNLRQRHSNLLVVASLVDNPYNLGGLSRVSEIFGAGALYLPSPTVTSNKD 239
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFL-ERKKHEGFSVLGLEQTANSIPL--DQYMFPKKT 1804
FQ +SV + +P+ + +++FL E+K+ EGF V+G+EQT S+ L + + P+K
Sbjct: 240 FQSVSVASHLHIPLKALLAKDLENFLAEKKREEGFRVVGIEQTDRSVLLGDEACVLPEKC 299
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+LV+G E+EGIP ++ + D +EIPQ+G+ RSLNV + I L EY +Q
Sbjct: 300 ILVIGSEREGIPAIVLSLCDLLVEIPQIGITRSLNVQTAAGIVLCEYAKQ 349
>gi|432905934|ref|XP_004077483.1| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase
TARBP1-like [Oryzias latipes]
Length = 1639
Score = 121 bits (304), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 12/153 (7%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASLID+ NL GL RTCE+F AS L + + DK FQ +SV++E W+P++EV
Sbjct: 1480 LLVVASLIDKPTNLGGLCRTCEIFGASALVLDSLRHVTDKHFQSLSVSSELWLPLLEV-- 1537
Query: 1767 NSIKHFLERKKHEGFSVLGLE----QTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
K + + E V + +T NS + ++ + E+EGIP +++ M
Sbjct: 1538 THTKXLMGQTSEEXAKVDTISSQYSRTENSSIMSFSLY------LCRNEREGIPANLLQM 1591
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LD C+EIPQ GV+RSLNVHVS A+ +WEYTRQ+
Sbjct: 1592 LDVCVEIPQQGVIRSLNVHVSAALLIWEYTRQR 1624
>gi|308163268|gb|EFO65618.1| TAR RNA loop binding protein, putative [Giardia lamblia P15]
Length = 209
Score = 120 bits (302), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
NL GLART E F L + A+ D F+ +S+TA+ W+ I EV + ++ K+
Sbjct: 67 NLGGLARTAEAFGLDSLVLGSASFALDPSFKAMSMTADMWLNIEEVRPYKLAQWIAEKRK 126
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG+SV+ LEQ++ S+ L P+KTVLVLG E+ G P +I+ + D +EI QLG +RSL
Sbjct: 127 EGYSVVCLEQSSKSVYLQDAKLPQKTVLVLGNERRGCPEEILSLCDMTVEIQQLGNIRSL 186
Query: 1839 NVHVSGAIALWEYTRQQRF 1857
NVHVS AI +W++ Q F
Sbjct: 187 NVHVSCAIFVWKWACQHSF 205
>gi|355723248|gb|AES07831.1| TAR RNA binding protein 1 [Mustela putorius furo]
Length = 588
Score = 120 bits (300), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 81/110 (73%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S + ++VASLID+ NL GL RTCEVF AS L + + DKQFQ +SV+AE+W+P+V
Sbjct: 479 SISRLIVVASLIDKPTNLGGLCRTCEVFGASALVLGSLQCVRDKQFQGLSVSAEQWLPLV 538
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
EV + FL++KK EG++V+G+EQTA S+ L QY FP++++L+LG E+
Sbjct: 539 EVKPPQLIDFLQQKKTEGYTVIGVEQTAKSVDLTQYSFPERSLLLLGNER 588
>gi|407923467|gb|EKG16538.1| tRNA/rRNA methyltransferase SpoU [Macrophomina phaseolina MS6]
Length = 1196
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
Query: 1695 LAMETIRASRQQ--FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
LA ++RQ +LV SLID NL GL+R E+F L + + L K F ++
Sbjct: 1029 LASPAASSARQSIPLILVGSLIDNAYNLGGLSRAAEIFGCESLYMRTLDTLKHKDFTSVA 1088
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGR 1810
V+++ +PI VP + FL K G+ V+G+EQT S+ L P K VLV+G
Sbjct: 1089 VSSQSHIPIRSVPPAELPEFLRAMKVAGYKVVGVEQTDRSLVLGAPGSDLPAKCVLVMGS 1148
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E+EGIP ++ D C+E+ Q+GV RSLNV + AI L+EY RQ
Sbjct: 1149 EREGIPGTVLAECDICVEVRQVGVTRSLNVQTAAAIVLYEYQRQH 1193
>gi|402592792|gb|EJW86719.1| hypothetical protein WUBG_02370 [Wuchereria bancrofti]
Length = 1532
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 1658 NQDNSSSSFFGNREAYKQLLEIEKEDELFD-QVLQARSLAMETIRASRQ--QFVLVASLI 1714
N S FG + + +I + D L D V+Q + A+ RA + ++VASL+
Sbjct: 986 NLSQYPSFVFGQTQVQRHQ-QIHEPDGLSDISVIQRKFNAVSVNRALLEGVSLIVVASLL 1044
Query: 1715 DRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLE 1774
D+ NL G+ RTCEV L +AD + D+ F +S+++E W+ + E + + L
Sbjct: 1045 DKAANLGGICRTCEVLGVEKLIVADLAKIKDRDFMALSMSSENWMNLEESRPEELPNLLL 1104
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
++ G+ ++G EQT NS PL + FP K VL+LG EKEGIP+ ++ LD +E+ Q+G
Sbjct: 1105 SFRNSGYVIIGAEQTTNSTPLHKIRFPSKMVLLLGNEKEGIPMHLLGYLDKTVEVLQIGH 1164
Query: 1835 VRSLNVHVSGAIAL 1848
RSLN +VS I+L
Sbjct: 1165 TRSLN-NVSTLISL 1177
>gi|241123159|ref|XP_002403800.1| hypothetical protein IscW_ISCW002074 [Ixodes scapularis]
gi|215493536|gb|EEC03177.1| hypothetical protein IscW_ISCW002074 [Ixodes scapularis]
Length = 316
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
+V V + +K +LE K++ G++++G EQTA S L Y FPKKT+L+LG EKEG+PV++I
Sbjct: 220 LVVVKPHQLKEYLEEKRNAGYTLVGAEQTAGSKALHDYRFPKKTLLLLGNEKEGLPVELI 279
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+LD C+EIPQ GV+RSLNVHVSGA +WEY +Q
Sbjct: 280 QLLDVCVEIPQRGVIRSLNVHVSGASWIWEYAKQH 314
>gi|260790089|ref|XP_002590076.1| hypothetical protein BRAFLDRAFT_83346 [Branchiostoma floridae]
gi|229275264|gb|EEN46087.1| hypothetical protein BRAFLDRAFT_83346 [Branchiostoma floridae]
Length = 1561
Score = 119 bits (297), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 214/486 (44%), Gaps = 92/486 (18%)
Query: 1357 FVVNDKDLARELYKKY--SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNL 1414
V D+++ +++++ + + HR K R WQ++ ++ ++ + + L +L N
Sbjct: 1135 LVEKDQEMTKKVHRYHLNAYPHRYKNRVWQVVLVILPYISETLAARYVDHLFNTLAAENQ 1194
Query: 1415 PSVRQYLETFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANV-ILHASKAVQ 1473
SVR +E + + ++PSL + + D D R ++S + I A++ +L K Q
Sbjct: 1195 ISVRYMVEWCLLLLLHRYPSLQSHLWDGLRHDSDKRIGIMASQMEITAHLGLLLEDKQEQ 1254
Query: 1474 FRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVLCKLFPTLDF-GTSQKMPLEKSCFEDL 1532
+ P ++P H ++R F L Q + + F G ++ L + C D
Sbjct: 1255 EAFFDKAFPAVMPWALVPHFAVRVFA-LSALQWMWRYCQEQGFTGLMERHSLLRPCL-DA 1312
Query: 1533 KSYLAKNSDCTRLRAS-----------------------MSGYLDA--YDPNLSI-TPAV 1566
K + + +L + +SG DA PNL + +P
Sbjct: 1313 KENITASKVWKKLTENWYIYNFRPRQDYSVETIFHSLPYLSGITDAEWISPNLFLQSPPA 1372
Query: 1567 IFVNRDKELEFECVPTSLMEQVLNFLNDVREDLR---YSMAKDVVTIKNESLKIGEDPDC 1623
I+ +++ + P L + REDLR YS+ K IK + +D
Sbjct: 1373 IWEDKESK------PLPLW--------NPREDLRKCVYSLWK----IKGPGIWNSQD--- 1411
Query: 1624 AETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKED 1683
D +EES S+ P + + QKKI +H
Sbjct: 1412 -----DSKQEESQSEPPAEG--NVQKKIITWRHT-------------------------- 1438
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
L + L + ++ +R + V+VASLID+ NL GL RTCE+F S L + +
Sbjct: 1439 -LEEPHLNMADMHIKVVR--KGHLVVVASLIDKPTNLGGLCRTCEIFGVSTLVLGSMKYV 1495
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
DK FQ +SV+++ WV I EV + ++E + +G+ ++G+EQTA+S L ++ FP K
Sbjct: 1496 EDKTFQQLSVSSQGWVNIQEVRPGELPEYVEEMRRQGYFLIGVEQTADSRNLTEFTFPDK 1555
Query: 1804 TVLVLG 1809
++L+LG
Sbjct: 1556 SLLLLG 1561
Score = 46.2 bits (108), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 45/283 (15%)
Query: 353 FDIRAVREFWEEIKRGLV-DEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNST 411
FD+ + EFW ++ GL+ + RK+++++LK + +
Sbjct: 256 FDVTSQGEFWALLQVGLLTGTNAVTRKRAMYLLKRAIDT-----------------ISRC 298
Query: 412 ARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAW 471
R +T D G L + + Q W+ +IL+ E LEE H+V+
Sbjct: 299 DRTITCTDA---------ATGLLFWWSPAHAAQLMPVWQDYILIIETLEENQVHVVKPVL 349
Query: 472 NHQITLLLQFS--LPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMI 529
TL+ + LP PG + PS WL ++ + F H N +
Sbjct: 350 PRMKTLITAMATVLPD---PGCL------LLHPS-----WLYTVYRKAFTHDNKNIHRWA 395
Query: 530 MQSFLGIEWKSYENCAKSVPESFLLGPFMEG-LNDPVHHKDFGTKGVYSSRTIERAA-SF 587
+ L ++ + + F+LGP M L D + + + S I +A F
Sbjct: 396 LLDILQLDLAASPHIITMGFTQFILGPVMSKLLQDTSLYNRLEGEKLGSCPVIGQAILPF 455
Query: 588 LHQYASFLDTRKQIAFLSNLASVAKQQSFGRVGLMALAECIAS 630
L + L + +++ F+ + + + G V L+ + + +AS
Sbjct: 456 LTKCLDMLGSAEKVQFMQDTITALSHEPCGAVPLLYVTQALAS 498
>gi|452846084|gb|EME48017.1| hypothetical protein DOTSEDRAFT_167525 [Dothistroma septosporum
NZE10]
Length = 1235
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 29/264 (10%)
Query: 1596 REDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPK 1655
RED AKD+ ++ + +GE +T++ E F PK
Sbjct: 993 REDFVALYAKDLASLPPSCMPLGEAMPLHQTVNTQATEPKF-----------------PK 1035
Query: 1656 HENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLA-METIRASRQQFVLVASLI 1714
N S N A L+ L LQ + A + + R +++ASL+
Sbjct: 1036 SNNDKVSQ-----NITAITNALD---STSLSTTALQTKGAAYLSSTRTRHNDLLVIASLV 1087
Query: 1715 DRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLE 1774
D NL GL+R E+F A L I IL K F SV++ PI+ +P + FL
Sbjct: 1088 DNPYNLGGLSRASEIFGAGTLYIPTTQILSHKDFTSTSVSSHLHFPILPLPAQDLAAFLA 1147
Query: 1775 RKKH-EGFSVLGLEQTANSIPL--DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
+K+ EG+ V+G+EQT S+ L + + P+K +LVLG E+ GIP ++ D +EI Q
Sbjct: 1148 KKRRKEGYKVVGIEQTDRSVILGDKECVLPEKCILVLGSERAGIPAVVLGECDVLVEIRQ 1207
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ RSLNV + I L EY RQ
Sbjct: 1208 RGITRSLNVQTAAGIVLNEYARQH 1231
>gi|78707755|gb|ABB46730.1| tRNA/rRNA methyltransferase, putative, expressed [Oryza sativa
Japonica Group]
gi|215694653|dbj|BAG89844.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 196
Score = 117 bits (294), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 21/189 (11%)
Query: 293 HIYILSRKCFFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSS----YTEGSENSDRSD 348
H LSR F + IW C +LF+L E DA+ +LSL L S+ ++ E D
Sbjct: 18 HQLKLSRSGFLESIWASCHSLFALRPAECLDAYNILSLSLYLSTLKYVFSGPHEPQD--- 74
Query: 349 RGEEFDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQI--RGENQGHSGVSDMRS- 405
+D+R EFW+EI+RGLVD++ LVRKQ+L+IL+ L I +N S RS
Sbjct: 75 ----YDLRNSNEFWDEIRRGLVDKDSLVRKQALYILRISLDIFPSSKNDAAQQCSRKRSA 130
Query: 406 ----QGKNSTARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEE 461
Q K +TA MTKR+ WA KEA+SLG+G+ S D + + + F+LLYEML+E
Sbjct: 131 ALPVQDKPNTA--MTKRERWAQKEARSLGIGETSQS-DENCSSRKDRSKVFLLLYEMLQE 187
Query: 462 YSTHLVEAA 470
Y THLVEAA
Sbjct: 188 YGTHLVEAA 196
>gi|16519470|gb|AAL25179.1|AC079852_12 Hypothetical protein [Oryza sativa]
gi|125573999|gb|EAZ15283.1| hypothetical protein OsJ_30701 [Oryza sativa Japonica Group]
Length = 246
Score = 117 bits (292), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 110/189 (58%), Gaps = 21/189 (11%)
Query: 293 HIYILSRKCFFKKIWKCCRTLFSLGTLERRDAFTVLSLYLSYSS----YTEGSENSDRSD 348
H LSR F + IW C +LF+L E DA+ +LSL L S+ ++ E D
Sbjct: 68 HQLKLSRSGFLESIWASCHSLFALRPAECLDAYNILSLSLYLSTLKYVFSGPHEPQD--- 124
Query: 349 RGEEFDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQI--RGENQGHSGVSDMRS- 405
+D+R EFW+EI+RGLVD++ LVRKQ+L+IL+ L I +N S RS
Sbjct: 125 ----YDLRNSNEFWDEIRRGLVDKDSLVRKQALYILRISLDIFPSSKNDAAQQCSRKRSA 180
Query: 406 ----QGKNSTARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEE 461
Q K +TA MTKR+ WA KEA+SLG+G+ S D + + + F+LLYEML+E
Sbjct: 181 ALPVQDKPNTA--MTKRERWAQKEARSLGIGETSQS-DENCSSRKDRSKVFLLLYEMLQE 237
Query: 462 YSTHLVEAA 470
Y THLVEAA
Sbjct: 238 YGTHLVEAA 246
>gi|301095554|ref|XP_002896877.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108627|gb|EEY66679.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 606
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 157/651 (24%), Positives = 264/651 (40%), Gaps = 100/651 (15%)
Query: 1137 SLLPMLRSVRLTLDLFASGSSGSLVSSCRGVDTQMMWHLVRSSWILHISCNKRRVAPIAA 1196
+L+ M+ + LTL A GSLV + + +D+ L+ W + N + P A
Sbjct: 5 ALIQMVNVLSLTLAQLA----GSLVQASKDIDS-----LLEEVWTAY---NDSKAKPDA- 51
Query: 1197 LLSSVLHYSVFSEEEMHMMENTPGPLKWFVEKVLEEGTKSPRTIRLAALHLTGLWLTNPW 1256
L+ + +F + E T W + P + A L W +P
Sbjct: 52 -LTRAVVTCMFQPVFLLRAELTSTMKLWLAGFIRFGSRHRPNVVFHLACRLCQTWRAHPV 110
Query: 1257 IIKYYIKELKLLTLYGSVAFDEDFEAELAENYDAKTEVSLLAKSPVPELTEAFINTELYA 1316
++ EL L LY DE + +LA + A + SP+ A + T
Sbjct: 111 SALSFVDELVELLLYKEPLIDE--KEQLATDAGAPFQ-GFQGYSPLDGNQTAAVTTHAKD 167
Query: 1317 RVSVAVLFSKLAD-QTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARELYKKY--- 1372
R V+ S + D + S+ + Q D+ LL L ++ E K++
Sbjct: 168 RFVRLVMLSFVDDVAVDKSSSSNDTQQLFDALTARLLKL--------NVTPEWQKQHMLN 219
Query: 1373 SAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKF 1432
S +K+R+WQ +CI+S V + ++ L + LPSVR Y+E F + + KF
Sbjct: 220 SDGFGKKLRSWQALCIVSAHVTKSQLTELLPTLATAFAVPQLPSVRYYMELFGMRMAAKF 279
Query: 1433 PS-LVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAVQFRHLE----DLLPPIVPL 1487
P+ + + L+P+L D ++ PQ +S + ++A ++ + L+ +LL ++P
Sbjct: 280 PTEICSGVLLPMLGDANLMPQVGASLLLVSAYLV---DTKLDDNSLDVDCGELLETMLPW 336
Query: 1488 LTSHHHSLRGFTQLLVYQVLCKLFP--TLDFGTSQKMPLEKSCFEDLKSYLAKNSDCTRL 1545
L + H G+T++L +L K+ P S K E YL+ N +C R+
Sbjct: 337 LNTSH----GYTRVLAQYLLAKVLPRHIHYLKQSSKDTPGLRFLEGTARYLSNNKECKRM 392
Query: 1546 RASMSGYLDAYDPNLS-----------ITPAVIFVNRDKELEFECVPTSLMEQVLNFLND 1594
+ LD + P+ I+ + RD L F
Sbjct: 393 LRRQARQLDEFHPDYESSLLGMLSSGFISEFGELLPRDGALRFS---------------- 436
Query: 1595 VREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLP 1654
E L+ +M + + E+ P +E S ++ + L Q+KI
Sbjct: 437 --EQLKTAMNELYAQYQLENFP----PPPSEQKSSMETDSV------SGFLTVQRKIDTT 484
Query: 1655 KHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLI 1714
+DN+ L + D FD R + + RQ ++ ASL+
Sbjct: 485 ALLLEDNA-------------LPAAMRAD--FDAA--RRGATLNARQRPRQPLIMCASLV 527
Query: 1715 DRIPNLAGLARTCEVFKASGLAIADANIL-HDKQFQLISVTAEKWVPIVEV 1764
D++PNLAGLARTCE+F A L + + + D F +S TA KW+P+ EV
Sbjct: 528 DKVPNLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEV 578
>gi|398407809|ref|XP_003855370.1| hypothetical protein MYCGRDRAFT_91052 [Zymoseptoria tritici IPO323]
gi|339475254|gb|EGP90346.1| hypothetical protein MYCGRDRAFT_91052 [Zymoseptoria tritici IPO323]
Length = 1359
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
+++ASL+D NL GL+R E+F A L + + + K F +SV++ +PI+ +
Sbjct: 1068 LIVIASLVDNPHNLGGLSRVSEIFGAGALYVTNPTVASSKDFVAVSVSSHFHLPILALLP 1127
Query: 1767 NSIKHFL-ERKKHEGFSVLGLEQTANSIPL-----DQYMFPKKTVLVLGREKEGIPVDII 1820
+ I F+ E++K EG++++G+EQT S+ + + P+K +LV+G E+EGIP ++
Sbjct: 1128 DDIPSFVAEKRKEEGYTIVGIEQTDRSVLIGGDGKEVVALPEKCILVVGSEREGIPAKVL 1187
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+EI Q+GV RSLNV + I L EY RQ+R
Sbjct: 1188 SECGLLVEIEQVGVTRSLNVQTAAGIVLAEYVRQRR 1223
>gi|169614449|ref|XP_001800641.1| hypothetical protein SNOG_10367 [Phaeosphaeria nodorum SN15]
gi|160707352|gb|EAT82702.2| hypothetical protein SNOG_10367 [Phaeosphaeria nodorum SN15]
Length = 1320
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+LVASLI+ N+ GL+R E F L I D K F+ SVT+EK PI E+
Sbjct: 1161 ILVASLIENCTNVGGLSRVAESFGLEALYIGDLRQTAHKDFKATSVTSEKHFPIHELKAG 1220
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQY--------MFPKKTVLVLGREKEGIPVDI 1819
+ FL K G+ +G+EQT S L + P+K VLVLG EK GI ++
Sbjct: 1221 GVPDFLIAMKRNGYVAVGIEQTDQSSILGTEDTGNASLGILPRKCVLVLGSEKGGITAEV 1280
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ LD C+EI +GV RSLNV +G IAL+E+ R+
Sbjct: 1281 LAALDRCVEIRTVGVTRSLNVQTAGGIALYEWWRK 1315
>gi|396476332|ref|XP_003839996.1| hypothetical protein LEMA_P107820.1 [Leptosphaeria maculans JN3]
gi|312216567|emb|CBX96517.1| hypothetical protein LEMA_P107820.1 [Leptosphaeria maculans JN3]
Length = 1292
Score = 111 bits (277), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 19/166 (11%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+LVASLID NL GL+R E F L I D K F+ SVT+EK PI + ++
Sbjct: 1122 ILVASLIDNPTNLGGLSRISESFGLEALYIDDLKKTAHKDFKATSVTSEKHFPIHALKIS 1181
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQ-------------------YMFPKKTVLVL 1808
+ FL K +G+ V+G+EQT S L + PKK V+VL
Sbjct: 1182 DVPQFLIETKRKGYVVVGVEQTDRSGILGEGEDVDAHGGAASTRWGKSIGTLPKKCVVVL 1241
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G EK GI +++ ++D C+EI +GV RSLNV +G IAL+E+ R+
Sbjct: 1242 GSEKGGITPEVLTVIDRCVEIKTVGVTRSLNVQTAGGIALYEWWRE 1287
>gi|453088024|gb|EMF16065.1| hypothetical protein SEPMUDRAFT_61582 [Mycosphaerella populorum
SO2202]
Length = 1258
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 1688 QVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL-HDK 1746
Q A L+ +T R +++ASL+D NL GL+R E+F A L I + + K
Sbjct: 1083 QTKGAAYLSSQTSRKRPPTLLVIASLVDNPYNLGGLSRVSEIFGAKTLYIENPRLTTSSK 1142
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHE---GFSVLGLEQTANSIPL--DQYMFP 1801
F SV++ + I +P S+ FL KK E GF V+G+EQT S L + + P
Sbjct: 1143 DFTSTSVSSHLHLDIQPLPPASLAQFLAAKKREDGGGFYVVGIEQTDRSAILGSKECVLP 1202
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+K VLV+G E+EGIP ++ D +EIPQ+G+ RSLNV + I L EY RQ
Sbjct: 1203 EKCVLVVGSEREGIPAVVLAECDLLVEIPQVGITRSLNVQTAAGIVLCEYVRQH 1256
>gi|159486240|ref|XP_001701150.1| tRNA (guanosine)-2'-O-methyltransferase [Chlamydomonas reinhardtii]
gi|158271953|gb|EDO97762.1| tRNA (guanosine)-2'-O-methyltransferase [Chlamydomonas reinhardtii]
Length = 113
Score = 110 bits (274), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLG 1809
+VT+E+W+P+ EV + +L + G+ ++G+EQ A S+PL + +P + VL+LG
Sbjct: 2 AVTSERWLPLREVSPRDLPAYLIEMRAAGYLLVGVEQAAGSVPLQSFAWPSHGRVVLLLG 61
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E+ G+P ++ +LDAC+EIP LGV RSLN HVSGA+A+W+Y +Q+
Sbjct: 62 NEQSGVPQPLLPLLDACVEIPMLGVTRSLNAHVSGAMAVWQYVQQR 107
>gi|219125928|ref|XP_002183221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405496|gb|EEC45439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 119
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 1728 EVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLE 1787
E+F A L I D + F+ + V A W+ I E + ++L ++ G+ ++G+E
Sbjct: 1 EIFAADRLVIPDLQVTKMDNFKSLCVGASDWIEIEECNEKDLANWLRCARNLGYYIVGIE 60
Query: 1788 QTANSIPLDQYMFPKK-TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGA 1845
QT++S+ L ++ +P TVL+LG+EKEGIPV+ + ++D C+EIPQLG++RSLNVHVSGA
Sbjct: 61 QTSSSVSLCEFQYPDAPTVLLLGKEKEGIPVEYLQLVDQCVEIPQLGIIRSLNVHVSGA 119
>gi|147776587|emb|CAN63021.1| hypothetical protein VITISV_042517 [Vitis vinifera]
Length = 236
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 744 GSLRARVREWLSGCSKQQ-SANNCKSRMLVLKSLNDFPISFTSHPSLSNAFVTCDDEDLD 802
GSLR +V +WL GC K+ A+ C ++M++L+ DFP F S L +AFVT DDEDLD
Sbjct: 24 GSLRVKVHQWLLGCGKKHCDADCCSTKMMLLEXFYDFPKRFISCHQLVDAFVTYDDEDLD 83
Query: 803 SWESKAKRWARVFFLVIKDEQDLAPVLK 830
+W +AKRW RVFFLVIK+EQDL P+LK
Sbjct: 84 AWGYEAKRWTRVFFLVIKEEQDLVPILK 111
>gi|401412648|ref|XP_003885771.1| putative RNA methyltransferase, TrmH family domain-containing protein
[Neospora caninum Liverpool]
gi|325120191|emb|CBZ55745.1| putative RNA methyltransferase, TrmH family domain-containing protein
[Neospora caninum Liverpool]
Length = 2918
Score = 108 bits (269), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 77/115 (66%), Gaps = 10/115 (8%)
Query: 1751 ISVTAEKWVPIV----------EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+SVTAE V +V +++ +L K +G++V+G+EQT +S L+ F
Sbjct: 2800 VSVTAEPTVTAALATSLVLFRFQVAADNVGTYLLDLKSKGYTVVGVEQTGSSEMLENATF 2859
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+KT LVLG EKEG+P ++ ++DACIEIPQLG++RSLNVHV+ A+ +WEYT+Q
Sbjct: 2860 ERKTALVLGAEKEGLPAALLALMDACIEIPQLGLIRSLNVHVTAAMVVWEYTKQH 2914
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R ++VASLID++PNLAGLARTCEVF A L I + +IL+D QF I V+A +W+PI +
Sbjct: 2691 RGDLIVVASLIDKVPNLAGLARTCEVFDAKKLTIHNLDILNDPQFNTIGVSAHRWLPIEQ 2750
Query: 1764 V 1764
V
Sbjct: 2751 V 2751
Score = 49.3 bits (116), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 31/219 (14%)
Query: 1310 INTELYARVSVAVLFSKLADQTEIVGSAKECQDALDSGKLFLLGLLDFVVNDKDLARE-- 1367
+++ L V+ + FS LA + G EC +G KD A +
Sbjct: 2220 VSSRLLDVVTRSPSFSALA-SVQDAGDGPECSGTNKAGS----------TPAKDEAPQHH 2268
Query: 1368 -LYKKYSAIHRRKVRAWQMICILSRFVDNDIVGQVTHFLHISLYR----NNLPSVRQYLE 1422
L S HR +R WQ + + F + LH L++ L VR Y++
Sbjct: 2269 YLPMPNSCHHRILLRGWQALTSFAPFFRAAPPAFLLS-LHSRLWKAVATPQLADVRHYID 2327
Query: 1423 TFAITIYLKFPSLVAEQLVPILRDYDMRPQALSSYVFIAANVILHASKAV---------- 1472
A+ + L P+ L +LR +D Q L + IA +LH S +
Sbjct: 2328 LLAVQMLLLAPAQSCAPLAELLRTFDAPTQTLIGGLTIAGFYLLHGSASGAEAQSSQAAR 2387
Query: 1473 -QFRHLEDLL-PPIVPLLTSHHHSLRGFTQLLVYQVLCK 1509
+ H+ ++L +VP LTS+ LRG +Q LV++ L K
Sbjct: 2388 EERAHVSEVLFAAVVPHLTSNAAYLRGVSQYLVHEFLRK 2426
Score = 45.8 bits (107), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 44/190 (23%)
Query: 355 IRAVREFWEEIKRGLVDEEGLVRKQSLHIL------------KAVLQIRGENQGHSGVSD 402
++A E W + +GLVD L RK+S +L +A+ RG+ +G
Sbjct: 710 LQARDERWAWLFQGLVDSTPLNRKRSRALLELFQATEQQPLLRALRATRGDREGG----- 764
Query: 403 MRSQGKNSTARGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEY 462
R +G S + R L A + K ++ + + W+AF+ L E LE++
Sbjct: 765 -RDRGLPSGEADIPPR-LAAEADGKLRDFAAELARCGVSPEAQEVGWQAFVQLLEALEDF 822
Query: 463 STHLVEAAWNH---------QITLLLQFSL----------------PHDNLPGSTGRAHQ 497
S HLV+ W H +++L L+ + PH+ GS
Sbjct: 823 SQHLVKQQWRHMRRLCALSAKVSLHLRLASGGSHQRQESVTRGGPGPHEKADGSGDAEPA 882
Query: 498 NWIKPSGEIF 507
W +GE F
Sbjct: 883 TWPGDAGETF 892
>gi|413926649|gb|AFW66581.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 1851
Score = 104 bits (260), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 706 VCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANN 765
VCE+V++ A SL+ E+PL LLHFI+ +PREF+DY G LR V++W K++
Sbjct: 1078 VCEQVIKVATSLINATEIPLNPLLHFIATIPREFSDYIGPLRVVVQKWF--VQKEE---- 1131
Query: 766 CKSRMLVLKSLNDFPISFTSHP--SLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQ 823
C +L L DF +F S SN F DDED+D+WE++A RWAR LV +E+
Sbjct: 1132 CSPGDTLLSKLIDFSATFVSQKRNEGSNVF---DDEDVDAWEAEA-RWART-LLVTSEEE 1186
Query: 824 DLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSE 883
L + +F++ G + +Q I +K I+ L+F++E++ + + + I+ + +
Sbjct: 1187 HLKRIFRFLEAYGYKLSEQCPSGDFIPIKNFIIVLSFIEELEEKKIPRGQSKVSIKREVQ 1246
Query: 884 I 884
I
Sbjct: 1247 I 1247
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%)
Query: 478 LLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIE 537
L + +L +D L ++ A ++ I W++VLWERGF H NPQVR ++MQSFL I
Sbjct: 972 LFESTLQNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIA 1031
Query: 538 WKSYENCAKSVPESFLLGPFMEGLNDPVHHKDF 570
W+ Y++C + +P F+LGP + GLND VHHKDF
Sbjct: 1032 WERYKDCTQIIPRGFVLGPLIRGLNDVVHHKDF 1064
>gi|413926648|gb|AFW66580.1| hypothetical protein ZEAMMB73_828091 [Zea mays]
Length = 1445
Score = 104 bits (259), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 103/181 (56%), Gaps = 13/181 (7%)
Query: 706 VCEKVLEAAASLMCTFEVPLEILLHFISALPREFTDYGGSLRARVREWLSGCSKQQSANN 765
VCE+V++ A SL+ E+PL LLHFI+ +PREF+DY G LR V++W K++
Sbjct: 1078 VCEQVIKVATSLINATEIPLNPLLHFIATIPREFSDYIGPLRVVVQKWF--VQKEE---- 1131
Query: 766 CKSRMLVLKSLNDFPISFTSHP--SLSNAFVTCDDEDLDSWESKAKRWARVFFLVIKDEQ 823
C +L L DF +F S SN F DDED+D+WE++A RWAR LV +E+
Sbjct: 1132 CSPGDTLLSKLIDFSATFVSQKRNEGSNVF---DDEDVDAWEAEA-RWART-LLVTSEEE 1186
Query: 824 DLAPVLKFIQNGGINICKQSNHVRCISMKFLILTLNFLQEIQIMQERYSECGIRIRTKSE 883
L + +F++ G + +Q I +K I+ L+F++E++ + + + I+ + +
Sbjct: 1187 HLKRIFRFLEAYGYKLSEQCPSGDFIPIKNFIIVLSFIEELEEKKIPRGQSKVSIKREVQ 1246
Query: 884 I 884
I
Sbjct: 1247 I 1247
Score = 102 bits (253), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%)
Query: 478 LLQFSLPHDNLPGSTGRAHQNWIKPSGEIFDWLSVLWERGFCHGNPQVRYMIMQSFLGIE 537
L + +L +D L ++ A ++ I W++VLWERGF H NPQVR ++MQSFL I
Sbjct: 972 LFESTLQNDYLNHTSCGAFHAQMESWERILYWMAVLWERGFSHENPQVRCLVMQSFLDIA 1031
Query: 538 WKSYENCAKSVPESFLLGPFMEGLNDPVHHKDF 570
W+ Y++C + +P F+LGP + GLND VHHKDF
Sbjct: 1032 WERYKDCTQIIPRGFVLGPLIRGLNDVVHHKDF 1064
>gi|451995541|gb|EMD88009.1| hypothetical protein COCHEDRAFT_1217101 [Cochliobolus heterostrophus
C5]
Length = 1264
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+LVASLID NL GL+R E F L I D + K F+ SV +EK + I E+
Sbjct: 1089 MLVASLIDNPTNLGGLSRISESFGLEALYIDDLKKVAHKDFKATSVRSEKHLAIKELKEL 1148
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPL-----------------------DQYMFPKKT 1804
+ FL K +G+ V+G+EQT S L D PKK
Sbjct: 1149 DVPAFLLEAKSQGYEVVGIEQTDRSGILGYEGVDGAYLGSDGDTIEVVRRQDIGTLPKKC 1208
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
LVLG EKEGI +++ ++D +EI +GV RSLNV +G IAL+E+ R+
Sbjct: 1209 CLVLGSEKEGISAEVLAVIDRNVEIKTVGVTRSLNVQTAGGIALYEWWRE 1258
>gi|451851663|gb|EMD64961.1| hypothetical protein COCSADRAFT_88227 [Cochliobolus sativus ND90Pr]
Length = 1264
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 88/170 (51%), Gaps = 23/170 (13%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+LVASLID NL GL+R E F L I D + K F+ SV +EK + I E+
Sbjct: 1089 MLVASLIDNPTNLGGLSRISESFGLETLYIDDLKKVAHKDFKATSVRSEKHLAIKELKEL 1148
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPL-----------------------DQYMFPKKT 1804
+ FL K +G+ V+G+EQT S L D PKK
Sbjct: 1149 DVPAFLLEAKSQGYEVVGIEQTDRSGILGYEGVDGAYLGSDGDTIEVVRRQDVGTLPKKC 1208
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
LVLG EKEGI +++ ++D +EI +GV RSLNV +G IAL+E+ R+
Sbjct: 1209 CLVLGSEKEGISAEVLAVIDRNVEIKTVGVTRSLNVQTAGGIALYEWWRE 1258
>gi|312372950|gb|EFR20796.1| hypothetical protein AND_19439 [Anopheles darlingi]
Length = 789
Score = 101 bits (252), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 70/103 (67%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
+++ASL++R PNL GLART E+F L I + +K+FQ +S+TAEKW+ I E+
Sbjct: 266 LIVIASLVNRAPNLGGLARTSEIFAVKQLVINSLQDIDNKEFQALSMTAEKWLNIGELKS 325
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+ I +LE K +G++++G EQT S P+ Q FPKK++LVLG
Sbjct: 326 HKIVEYLEEMKAKGYAIVGAEQTTGSKPIQQLSFPKKSILVLG 368
>gi|427418918|ref|ZP_18909101.1| rRNA methylase [Leptolyngbya sp. PCC 7375]
gi|425761631|gb|EKV02484.1| rRNA methylase [Leptolyngbya sp. PCC 7375]
Length = 164
Score = 99.4 bits (246), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
V+ ASLI+ N A L RTCEV + L + + +F+ IS +A++W + P
Sbjct: 16 LVVCASLIENTTNQAALCRTCEVLGVNRLILPAPD--GSWEFRKISASAQRWQTLEYCPP 73
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+ +L ++ + + L + L Y FP KT+L+LGRE GIP DI + D
Sbjct: 74 EQLGQWLAQQN--SYVRVALTVGGSVQKLTDYTFPAKTLLLLGRELTGIPADIAAVCDVT 131
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ IPQ G V SLNV +GAIA++EY RQ R
Sbjct: 132 LTIPQYGRVESLNVQTAGAIAIYEYNRQWRL 162
>gi|70914349|ref|XP_731810.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56502066|emb|CAH84226.1| hypothetical protein PC300919.00.0 [Plasmodium chabaudi chabaudi]
Length = 118
Score = 98.6 bits (244), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 1727 CEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGL 1786
CE+F L +++ NI+ D QFQ IS TA KW+ I E+ I +L +KK + +S++GL
Sbjct: 1 CEIFNVKKLLLSNINIVKDFQFQKISSTANKWMNIQELKKKDIIKYLIKKK-KKYSIIGL 59
Query: 1787 EQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGA 1845
EQT +S L+ ++FP+K +L+LG EKEG+P I+ +L C+EIP G++RSLNVHVS A
Sbjct: 60 EQTNDSKRLNDFIFPEKCILILGDEKEGLPSSILLLLHHCVEIPGHGIIRSLNVHVSAA 118
>gi|330924237|ref|XP_003300564.1| hypothetical protein PTT_11833 [Pyrenophora teres f. teres 0-1]
gi|311325249|gb|EFQ91337.1| hypothetical protein PTT_11833 [Pyrenophora teres f. teres 0-1]
Length = 1272
Score = 97.8 bits (242), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+++ASLID NL GL+R E F L I D K F+ SV +EK + I E+
Sbjct: 1092 MMIASLIDNPTNLGGLSRISESFGLEALYIDDLKKTAHKDFKATSVRSEKHLAIRELKEV 1151
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPL-----------------------------DQY 1798
+ FL K +G+ V+G+EQT S L D
Sbjct: 1152 GVPAFLLGAKSKGYEVVGIEQTDRSGILGNEDSSDQKEIVAGNESTGEQSTHVVRSQDIG 1211
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
PKK LVLG EKEGI +++ ++D +EI +GV RSLNV +G IAL+E+ R+
Sbjct: 1212 TLPKKCCLVLGSEKEGISAEVLAVIDRNVEIKTVGVTRSLNVQTAGGIALYEWWRE 1267
>gi|428225761|ref|YP_007109858.1| tRNA guanosine-2'-O-methyltransferase [Geitlerinema sp. PCC 7407]
gi|427985662|gb|AFY66806.1| tRNA guanosine-2'-O-methyltransferase [Geitlerinema sp. PCC 7407]
Length = 170
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
R V+ SL+ NL L R E F+ L + D + D F+ ++V+ +W P+
Sbjct: 14 RHSLVVCGSLVHNPANLGSLCRMAEAFRLESLVLPDLAVAEDWAFRHLAVSTHRWQPLAT 73
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
P + + +L ++ G+ + L ++PL Q+ FP++++LVLG+E G+P +
Sbjct: 74 CPRDRLVPWLAEQQRRGYCAIALHLCPEAVPLPQFAFPRRSLLVLGQELTGVPESVAAAC 133
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D + IPQ G+V SLNV V+ AIA + YT+Q
Sbjct: 134 DRALVIPQWGMVESLNVSVAAAIAAYAYTQQH 165
>gi|189199908|ref|XP_001936291.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983390|gb|EDU48878.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 388
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
+++ASLID NL GL+R E F L I + K F+ SV +EK + I E+
Sbjct: 208 MMIASLIDNPTNLGGLSRISESFGLEALYIDNLKKAAHKDFKATSVRSEKHLAIRELKEV 267
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPL-----------------------------DQY 1798
+ FL K +G+ V+G+EQT S L D
Sbjct: 268 GVPAFLLDAKSKGYEVVGIEQTDRSGILGHEDSSDQKEILTGDKSAGGQSTHVIRSQDIG 327
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
PKK LVLG EKEGI +++ ++D +EI +GV RSLNV +G IAL+E+ R+
Sbjct: 328 TLPKKCCLVLGSEKEGISAEVLAVIDRNVEIKTVGVTRSLNVQTAGGIALYEWWRE 383
>gi|440795189|gb|ELR16325.1| RNA methyltransferase, TrmH superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 179
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 1719 NLAGLARTCEVFKASGLAIA-----------DANILHDKQFQLISVTAE------KWVPI 1761
N++ +ARTC + L DA +L D S AE W +
Sbjct: 28 NVSAIARTCSCLQVRQLVCCGTAKLLNKVARDAVLLQDSAKDNKSGDAEGSASSGSWFKV 87
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
V N+++H L R K EG+ V+GLEQTA S L + F +KTVLV+G E +GIP DI+
Sbjct: 88 V----NTLRHPLLRFKEEGYEVVGLEQTAASTSLYDFRFARKTVLVIGSENKGIPPDILA 143
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D +EIP G SLNV + AI L+EY RQ
Sbjct: 144 VCDRVVEIPLNGPPHSLNVASAAAIGLYEYCRQH 177
>gi|224138740|ref|XP_002326678.1| predicted protein [Populus trichocarpa]
gi|222834000|gb|EEE72477.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 91.7 bits (226), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 1 MTSTETSSVGSLVSSLVSSFKLVPPAAIPPMLDCILTSTGSSASAIFFSLLD----LSKD 56
M + E++ + S++SSL SFK VP AA+P MLDCIL STG S SA+F SLLD KD
Sbjct: 1 MNAEESNPMVSIISSLSDSFKQVPLAALPAMLDCILASTGLSPSALFASLLDSFSKFIKD 60
Query: 57 AIKEGQKLDSDQCNYIASMVGALCHLLKTLGA 88
++ KLDS CNYI SMVG+LCHLL A
Sbjct: 61 VREKDLKLDSSMCNYITSMVGSLCHLLNKFDA 92
>gi|301096946|ref|XP_002897569.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107029|gb|EEY65081.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 719
Score = 90.9 bits (224), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 45/51 (88%)
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
VL LGREKEGIPV+++ ++D C+EIPQ G+VRSLNVHVSG + LWEYT+QQ
Sbjct: 659 VLALGREKEGIPVEVLQLVDVCVEIPQFGLVRSLNVHVSGPLVLWEYTQQQ 709
>gi|149196494|ref|ZP_01873548.1| RNA methyltransferase TrmH, group 3 [Lentisphaera araneosa HTCC2155]
gi|149140174|gb|EDM28573.1| RNA methyltransferase TrmH, group 3 [Lentisphaera araneosa HTCC2155]
Length = 166
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 1720 LAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHE 1779
+AG + +V A+G A ++ I D Q+ VT NS+ L++ K +
Sbjct: 40 MAGCSGVSQVI-ATGNAKVNSKIARDGAEQVNLVTK-----------NSLPPVLKKLKQD 87
Query: 1780 GFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLN 1839
G++++GLEQT NS L + FP K VLV+G E+EG+ D + LD +EIP G+ S N
Sbjct: 88 GYTLVGLEQTTNSNNLHDFDFPHKCVLVVGAEREGLSQDCLDCLDYTVEIPVWGLPYSYN 147
Query: 1840 VHVSGAIALWEYTRQ 1854
V + ++A++EY RQ
Sbjct: 148 VASATSLAVYEYCRQ 162
>gi|152992691|ref|YP_001358412.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. NBC37-1]
gi|151424552|dbj|BAF72055.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. NBC37-1]
Length = 216
Score = 80.1 bits (196), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 73/136 (53%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
NL+ + RTC+ L ++ + + I+ A +WV + + FL++K+
Sbjct: 40 NLSAILRTCDAVGVQHLYYTTSDNRDLRIHKTITQGAHRWVERTRISTEEQRVFLQKKQK 99
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG+ V+ ++P + + K T++V+G EK+G+ + + + D I IP G+V+SL
Sbjct: 100 EGYQVVVTHLEERAVPFREVDYTKPTIIVMGNEKDGVSSETVELADTVIIIPMQGMVQSL 159
Query: 1839 NVHVSGAIALWEYTRQ 1854
NV V+ A+ L+E RQ
Sbjct: 160 NVSVAAALILYEAERQ 175
>gi|320535491|ref|ZP_08035597.1| RNA methyltransferase, TrmH family, group 3 [Treponema phagedenis
F0421]
gi|320147683|gb|EFW39193.1| RNA methyltransferase, TrmH family, group 3 [Treponema phagedenis
F0421]
Length = 255
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 1660 DNSSSSFFGNREAYKQ-LLEIEKEDELFDQVLQARSLAMETI----RASRQQFVLVASLI 1714
D+ +SS + A++ LL EK++ V S+++E I R +L+A I
Sbjct: 59 DSMASSLPESLRAHRGVLLTAEKKESAKGSV---SSISIEEIFAAVRKKESALILMADSI 115
Query: 1715 DRIPNLAGLARTCEVFKASGLAIADANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFL 1773
N+ + R+ + F + + + D + IS A WVP++EVP ++
Sbjct: 116 TDPHNIGAIVRSADQFGVDAVIVPQRHSAGDSEIIAKISAGATAWVPLIEVP--NLVRTA 173
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
E+ K EGF V G + + P+ + FP+KT+L+LG E GI + + D+ I IP G
Sbjct: 174 EQCKKEGFWVYGADASGE--PIGKLSFPQKTLLILGSEGSGIARLLKNCCDSLIAIPTRG 231
Query: 1834 VVRSLNVHVSGAIALWEYTR 1853
+ SLNV V+ I L+E R
Sbjct: 232 KLDSLNVSVAAGILLYEIRR 251
>gi|87310712|ref|ZP_01092839.1| RNA methyltransferase, TrmH family protein [Blastopirellula marina
DSM 3645]
gi|87286469|gb|EAQ78376.1| RNA methyltransferase, TrmH family protein [Blastopirellula marina
DSM 3645]
Length = 166
Score = 77.8 bits (190), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
S+ L+ K EG+ ++GLEQT NS + + F + TVLV+G E++G P D++ +LD +
Sbjct: 76 SLPPVLKELKSEGYRLVGLEQTTNSQDIHHFSFVRNTVLVIGNERQGTPDDVLRLLDDVV 135
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
EIP G+ S NV + +AL+E+ RQ
Sbjct: 136 EIPVYGMPYSFNVATATCMALYEFCRQ 162
>gi|332293222|ref|YP_004431831.1| tRNA/rRNA methyltransferase SpoU [Krokinobacter sp. 4H-3-7-5]
gi|332171308|gb|AEE20563.1| tRNA/rRNA methyltransferase (SpoU) [Krokinobacter sp. 4H-3-7-5]
Length = 218
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 30/201 (14%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
AY Q E+ +LFD+VL+ R+ F + + ++ N + + R+CE F
Sbjct: 7 AYLQSFLTERRVQLFDKVLKERT----------NHFTVAVEDVYQLHNTSAVIRSCESFG 56
Query: 1732 ASGL-AIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQT 1789
L I + N+ D++ I++ A+KWV + +S KH +E + +G+ ++
Sbjct: 57 VQELHVIEEVNVKRIDRE---IAMGAQKWVDVQRH--SSAKHCIENLRKQGYKIVATSPH 111
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL- 1848
++ L+ + +K + GRE EG+ ++ M D I IP +G SLN+ VS AI L
Sbjct: 112 KDAHRLEDFDITEKAAIFFGRETEGLSDTVLDMADDFIYIPMVGFTESLNISVSAAITLQ 171
Query: 1849 ------------WEYTRQQRF 1857
W++T Q+ F
Sbjct: 172 HIMTKLKQSSNSWQFTEQELF 192
>gi|158294903|ref|XP_315892.4| AGAP005864-PA [Anopheles gambiae str. PEST]
gi|157015781|gb|EAA11568.4| AGAP005864-PA [Anopheles gambiae str. PEST]
Length = 1386
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R + + +VAS + +P+LA LAR + F L I L KQF++ S + E+W
Sbjct: 1231 REASKGLYVVASNVTNVPDLADLARMGKRFGIKQLFINSLQDLDSKQFKMRSASVEQWQT 1290
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLE--QTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
+ E+ +++ +L + +G++++ ++ +T S PL Q PKK VLVL E P
Sbjct: 1291 VRELKAHNVYSYLWDLQDKGYTLVNVKHTETPQSTPLHQLQLPKKCVLVLNL-LERFPHA 1349
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ + IP +G R L V + A+ +WEY +Q
Sbjct: 1350 VLN-----VYIPPIGAKRLLTVPETAALLMWEYAKQH 1381
>gi|283782445|ref|YP_003373200.1| tRNA/rRNA methyltransferase SpoU [Pirellula staleyi DSM 6068]
gi|283440898|gb|ADB19340.1| tRNA/rRNA methyltransferase (SpoU) [Pirellula staleyi DSM 6068]
Length = 177
Score = 76.3 bits (186), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 20/177 (11%)
Query: 1683 DELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLART---CEVFK--ASGLAI 1737
D F+ V +E R+ ++VA L ++ NL+ +ART C + K A G
Sbjct: 12 DAAFEHVRHRPPTQLER---PRELLLVVAPLRSQV-NLSNIARTASCCGLTKIVACGQGK 67
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
D + D +L +P+ L+ + EG+ + LEQT +S+ + +
Sbjct: 68 LDKTVARDGADELEIEVHRTLLPV-----------LKELRKEGWFLAALEQTTDSVNMHE 116
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
Y FP+K LV+G E+ G+ + + +++ C+EIP G+ S NV + A+AL+EY RQ
Sbjct: 117 YQFPRKVALVIGNERHGLSDEELSLMNVCLEIPVWGLPHSYNVANATAMALYEYCRQ 173
>gi|409123264|ref|ZP_11222659.1| TrmH family tRNA/rRNA methyltransferase [Gillisia sp. CBA3202]
Length = 217
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 93/176 (52%), Gaps = 21/176 (11%)
Query: 1685 LFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH 1744
LF++V+ R+ F +V+ + ++ N + + R+C+VF I + +++
Sbjct: 21 LFNKVIAQRT----------NHFTVVSEDVYQLHNTSAVIRSCDVF-----GIQNVHVIE 65
Query: 1745 DKQFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+++ + I ++ A+KWV + +S+K +++ + EG+ ++ A +I L +
Sbjct: 66 EQKVKKIDREIAMGAQKWVTLNRHD-DSLK-CIQKLREEGYQIIATSPNAEAIELSDFDI 123
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K L LG EK+G+ +++ D CI+IP +G SLN+ VS AI L E T + R
Sbjct: 124 DKPAALFLGTEKDGLSQEVLSNADQCIKIPMVGFTESLNISVSAAIILQELTSRLR 179
>gi|83999870|emb|CAI59983.1| putative tRNA/mRNA methyltransferase [Streptomyces tenjimariensis]
Length = 164
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 1705 QQFVLVASLIDRIPNLAGLART---CEVFK--ASGLAIADANILHDKQFQLISVTAEKWV 1759
++ V+V + + NL+ + RT C V + A G A D + D +
Sbjct: 17 RELVIVCAPLRTKANLSSIVRTAGCCGVKRVIACGSAAIDRKVARDGADHVELELRRTLA 76
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
P+ L++ EG+ ++ LEQT+NS L + FP+KT LV+G E+ G+ +
Sbjct: 77 PV-----------LKKLSAEGYRLVALEQTSNSTSLHDFAFPRKTALVIGNERTGLDDEE 125
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ ++D C EIP G+ S NV + A+A++EY +Q
Sbjct: 126 LKLVDDCTEIPVWGMPHSYNVATATAMAMYEYCKQ 160
>gi|255536513|ref|YP_003096884.1| RNA methylase, SpoU family [Flavobacteriaceae bacterium 3519-10]
gi|255342709|gb|ACU08822.1| RNA methylase, SpoU family [Flavobacteriaceae bacterium 3519-10]
Length = 197
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIH 1821
+ V+++ LE K E ++V+G+EQT+NS + Y K K +VLG E +G+ D +
Sbjct: 103 IYVDTVSAALETLKKENYTVIGIEQTSNSQKIGDYHISKDQKYAVVLGNEVDGLSEDALA 162
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
+ DA +EIPQLG SLNV V G I +WE+
Sbjct: 163 LYDAFLEIPQLGTKHSLNVSVCGGIVMWEF 192
>gi|268530712|ref|XP_002630482.1| Hypothetical protein CBG11218 [Caenorhabditis briggsae]
Length = 1250
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV 1766
++VASL+D+ NL G+ RT E+F L +AD + D F+ +S+++E W I V
Sbjct: 1117 LIVVASLVDKPNNLGGICRTSEIFGVDTLVVADVLVAQDSNFKALSMSSENWQNIEAVKR 1176
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
++ +L+ + G++V+ EQT +S+ + ++FPKK
Sbjct: 1177 ANLLEYLQGLRANGYTVIAAEQTTDSVMMHDFVFPKK 1213
>gi|429741543|ref|ZP_19275201.1| RNA methyltransferase, TrmH family [Porphyromonas catoniae F0037]
gi|429158649|gb|EKY01188.1| RNA methyltransferase, TrmH family [Porphyromonas catoniae F0037]
Length = 180
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD--ANILHDKQFQLISVTA 1755
E +R + V+V + + N+ + RT + F+ L + A H ++ A
Sbjct: 16 EYLRRDKLPIVVVLDDVRSMNNIGSIFRTADAFRIEALVLCGITATPPH-TDIHKTALGA 74
Query: 1756 EKWVP--IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT---VLVLGR 1810
E+ VP + V ++K + EG+ VL LEQ +S+ LD ++ P+ LVLG
Sbjct: 75 EESVPWRYIHSSVEAVKEL----RAEGYQVLALEQVHDSLKLDTFI-PEPNQGYALVLGN 129
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
E G+ +++ +D C+EIPQ G SLNV V+ IALW R
Sbjct: 130 EVHGVKEEVVQQVDHCLEIPQFGTKHSLNVSVAAGIALWHMAR 172
>gi|78778803|ref|YP_396915.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9312]
gi|78712302|gb|ABB49479.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. MIT 9312]
Length = 223
Score = 74.7 bits (182), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 13/157 (8%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
Q ++ +++ NL+ + RTC+ VF+A+ ++ +A K F + ++KWV +
Sbjct: 20 QNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNA----VKTFNSTAQGSQKWVKL 75
Query: 1762 V--EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
E + +I K++GF + G + S+ + + + T VLG EK G+ +I
Sbjct: 76 NNHENTITAISDL----KNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSKEI 131
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I M+D I IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 132 ISMVDQSIFIPMRGMVQSLNVSVAASILLFEAIRQRK 168
>gi|42526951|ref|NP_972049.1| RNA methyltransferase [Treponema denticola ATCC 35405]
gi|449111993|ref|ZP_21748548.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
33521]
gi|449113203|ref|ZP_21749718.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
35404]
gi|41817266|gb|AAS11960.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
35405]
gi|448956274|gb|EMB37035.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
33521]
gi|448960783|gb|EMB41492.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
35404]
Length = 258
Score = 74.7 bits (182), Expect = 5e-10, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFFGNR--------EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKKDNQFLDSLTKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--NLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|374598005|ref|ZP_09671007.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|423323659|ref|ZP_17301501.1| hypothetical protein HMPREF9716_00858 [Myroides odoratimimus CIP
103059]
gi|373909475|gb|EHQ41324.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|404609186|gb|EKB08582.1| hypothetical protein HMPREF9716_00858 [Myroides odoratimimus CIP
103059]
Length = 237
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 1661 NSSSSFFGNRE--AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIP 1718
N S+ F + E AY + E E F +VL R+ +VA + ++
Sbjct: 2 NISNKLFQDVEYLAYLETFLTENRVERFKEVLSNRT----------NHITVVAEDVYQLH 51
Query: 1719 NLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERK 1776
N + + R+CEVF GL + + DKQ I++ AEKWV I NS++ ++
Sbjct: 52 NTSAVMRSCEVFGVQGLHVIEQKFGKRIDKQ---IALGAEKWVDIHRY--NSVQGSIDAI 106
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K +G+ ++ + LD++ + + G EK G+ +II D I IP +G
Sbjct: 107 KAKGYKIVATTPHGTAQSLDKFDLSEPVAIFFGTEKSGLSPEIIEQADDYITIPMVGFTE 166
Query: 1837 SLNVHVSGAIAL 1848
SLN+ VS AI +
Sbjct: 167 SLNISVSAAIII 178
>gi|212550666|ref|YP_002308983.1| rRNA methyltransferase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548904|dbj|BAG83572.1| putative rRNA methyltransferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 180
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKAS-----GLAIADANI-LHDKQFQLISVTA 1755
+ V+V I + N+ + RTC+ F+ G+ N+ +H
Sbjct: 20 VKKNPLVVVLDNIRSLNNVGSVFRTCDAFRVETVYLCGITAIPPNVEIHKTALGAEDSVN 79
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP-KKTVLVLGREKEG 1814
K+ PI +E +G+ ++ +EQ SI LD++ K ++LG E G
Sbjct: 80 WKYSPIT-------LRIVEELHQKGYQIIAVEQAEESIMLDEFQSKYSKQAIILGNEVHG 132
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
I ++++ DACIEIPQ G SLNV ++ I +WE T+
Sbjct: 133 IDQEVMNQCDACIEIPQFGTKHSLNVSITAGIVIWEITK 171
>gi|301612742|ref|XP_002935875.1| PREDICTED: probable methyltransferase TARBP1-like [Xenopus (Silurana)
tropicalis]
Length = 1402
Score = 73.9 bits (180), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV 1762
S ++VASLID+ NL GL RTCE+F AS L + + ++DKQFQ +SV+AE+W+P++
Sbjct: 736 SSGSLIVVASLIDKPTNLGGLCRTCEIFGASALVVDSLHHVNDKQFQYLSVSAEQWLPLI 795
Query: 1763 EVPVNSIKHFLE 1774
EV + +L+
Sbjct: 796 EVKPTQLLEYLQ 807
>gi|291085009|ref|ZP_06570899.1| putative tRNA/rRNA methyltransferase [Citrobacter youngae ATCC 29220]
gi|291071645|gb|EFE09754.1| putative tRNA/rRNA methyltransferase [Citrobacter youngae ATCC 29220]
Length = 246
Score = 73.9 bits (180), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 93 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 152
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ +H G++V+ + + PL P+K VLVLGRE+E +P
Sbjct: 153 PITG---DSIVDVLDDFRHAGYTVV-MTSSVKGKPLFTTTLPEKMVLVLGREREALPEAA 208
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C+ I G V +LNV V+ + L E+ RQ +
Sbjct: 209 CSADDLCVAIDGTGNVETLNVSVATGVLLAEWWRQNK 245
>gi|237732567|ref|ZP_04563048.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908106|gb|EEH94024.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 363
Score = 73.6 bits (179), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 210 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 269
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ + G++V+ + +A PL P+K VLVLGRE+E +P
Sbjct: 270 PITG---DSIVDVLDDFRQAGYTVV-MTSSAKGKPLFTTTLPEKMVLVLGREREALPEAA 325
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CI I G V +LNV V+ + L E+ RQ +
Sbjct: 326 CSADDLCIAIDGTGKVETLNVSVATGVLLAEWWRQNK 362
>gi|228472383|ref|ZP_04057148.1| SpoU protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276251|gb|EEK14986.1| SpoU protein [Capnocytophaga gingivalis ATCC 33624]
Length = 220
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
AY + ++ E F Q+L R+ + F + + ++ N + + RTCEVF
Sbjct: 10 AYLEEFITQERKERFTQILSQRT----------EHFTVAIEDLFQVHNTSAVVRTCEVF- 58
Query: 1732 ASGLAIADANILHDKQFQL----ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLE 1787
+ A+I+ +K + I++ AEKWV + P + +E + +G+ ++
Sbjct: 59 ----GVQTAHIIEEKYGKRLDSKIAMGAEKWVTTIRYP--HTQPCIEALRGQGYRIVATV 112
Query: 1788 QTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIA 1847
+ PL ++ K+ G E++G+ ++I D C+ IP +G SLN+ VS AI
Sbjct: 113 PPPGATPLQEFDITPKSAFFFGTERDGLSQEVISQADECLTIPMVGFTESLNISVSVAII 172
Query: 1848 LWEYTRQQR 1856
L T + R
Sbjct: 173 LQYVTAKLR 181
>gi|220903872|ref|YP_002479184.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868171|gb|ACL48506.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 250
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 1671 EAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEV 1729
E Y+ L KED + + + R + + A RQ LV + I N++ + R+C+
Sbjct: 41 EKYQDLNRTAKEDLMTKEPTERRKARLLEVLAHRQPDLTLVLANIHDPHNVSAIYRSCDA 100
Query: 1730 FKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH-----FLERKKHEGFSVL 1784
F S + + N + S +A KWV S +H +E + + VL
Sbjct: 101 FGVSRVNLYYTNTPFPALGRKTSASARKWV-------ESARHKDSAALMESLRGQNMQVL 153
Query: 1785 GLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSG 1844
+ + PL + F + T +++G E G+ +++ M D + IP G+++S NV V+
Sbjct: 154 ATSCSPTARPLRDWDFTRPTAVIMGNEHSGVEPELLQMADGELYIPMYGMIQSFNVSVAA 213
Query: 1845 AIALWEYTRQQ 1855
AI L E RQ+
Sbjct: 214 AIILSEAARQR 224
>gi|449109481|ref|ZP_21746115.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
33520]
gi|448958724|gb|EMB39452.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC
33520]
Length = 258
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKQDNQFLDSITKILPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T S+++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAESQKKEMSIDEFFAKLAEKDSSFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--DLTFPKKTVLIMGSEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|238810259|dbj|BAH70049.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 244
Score = 73.2 bits (178), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 1649 KKITLPKHENQDNSSSSFFGN--REAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQ 1706
K+IT K E +DNS FF N + ++ ++ I ++ ++D +ETI+ +
Sbjct: 50 KQITKAKIEMKDNS---FFANYRNDNHQGVIAILRDFPIYD---------LETIKKDNPE 97
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIA---DANILHDKQFQLISVTAEKWVPIVE 1763
VLV I NL + RT L I+ ANI ++ V++ +V +
Sbjct: 98 NVLVLDHIQDPHNLGAIIRTANTCGIKHLIISKERSANITS----TVLKVSSGGFVNMKI 153
Query: 1764 VPVNSIKHFLERKKHEGF--SVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
+ VNSI L + K + V L++TA + +Q F K +VLV+G E +G+ ++
Sbjct: 154 IKVNSISATLTKLKKWNYWIYVSALDETAQKV--NQVTFNKPSVLVVGNEGDGVSKSTLN 211
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
D I IPQ G V+S+NV V+ I L+E T+
Sbjct: 212 EADQVIYIPQKGSVQSMNVSVATGILLYELTK 243
>gi|157412835|ref|YP_001483701.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9215]
gi|157387410|gb|ABV50115.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9215]
Length = 223
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 1714 IDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIK 1770
+++ NL+ + RTC+ VF+A+ ++ +A K F + ++KWV + N+IK
Sbjct: 29 VNKPHNLSAILRTCDAAGVFEANFISKTNA----VKTFNSTAQGSQKWVKLNNHE-NTIK 83
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+ K ++GF + G + S+ + + + T VLG EK G+ ++I M+D I IP
Sbjct: 84 AISDLK-NKGFKLYGTTLNSKSVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIFIP 142
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ +I L+E RQ++
Sbjct: 143 MRGMVQSLNVSVAASILLFEAVRQRK 168
>gi|163755356|ref|ZP_02162476.1| tRNA/rRNA methyltransferase (SpoU) [Kordia algicida OT-1]
gi|161324776|gb|EDP96105.1| tRNA/rRNA methyltransferase (SpoU) [Kordia algicida OT-1]
Length = 218
Score = 73.2 bits (178), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E+ ELF +VL R+ + F + + ++ N + + R+C+VF + + +
Sbjct: 15 ERRKELFIKVLSKRT----------RHFTVAVEDVYQMHNTSAVLRSCDVFGIQDVHVIE 64
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
A L K + I++ A+KWV I N + ++ K +G+ ++ +S L +
Sbjct: 65 AR-LGKKMDREIAMGAQKWVDIHRY--NDTQQCIDTLKKQGYRIIATTPHEDSQYLHDFD 121
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+K G+EKEG+ +++ D ++IP +G SLN+ VS AI + E T + R
Sbjct: 122 ITQKAAFFFGKEKEGLSEEVLSQADEFLKIPMVGFTESLNISVSAAITIQEVTTKLR 178
>gi|375147657|ref|YP_005010098.1| tRNA/rRNA methyltransferase SpoU [Niastella koreensis GR20-10]
gi|361061703|gb|AEW00695.1| tRNA/rRNA methyltransferase (SpoU) [Niastella koreensis GR20-10]
Length = 170
Score = 73.2 bits (178), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
++R K +G+ V +EQ +SIPL Q+ + + +V G E G+ ++I + D CIEIP
Sbjct: 85 VQRLKADGYQVFAIEQVQHSIPLHQFELNQHPQVAVVFGNEVSGVDQEVIKLCDGCIEIP 144
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQ 1855
QLG+ SLN+ V+ I LWE R +
Sbjct: 145 QLGMKHSLNISVAAGIVLWELVRSK 169
>gi|229917708|ref|YP_002886354.1| tRNA guanosine-2'-O-methyltransferase [Exiguobacterium sp. AT1b]
gi|229469137|gb|ACQ70909.1| tRNA guanosine-2'-O-methyltransferase [Exiguobacterium sp. AT1b]
Length = 254
Score = 73.2 bits (178), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 6/179 (3%)
Query: 1681 KEDEL--FDQVLQARSLAM-ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI 1737
KED+L ++ ++ R M E + ++ +D N + + R+ + F L +
Sbjct: 29 KEDDLPLYEMLMPDRIKRMYEVLNTRTNHITILTEGVDDPHNQSAVLRSADAFGVQTLHV 88
Query: 1738 ADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
+ K +I+ +A++WV +VE SI+ ++ K G+ V + +IPL++
Sbjct: 89 VEGRAKF-KPNSIIAKSADRWVDVVEH--GSIEEAIDALKESGYQVYATALSEEAIPLEE 145
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K TVL+ G E G+ +H D IP G V+SLN+ V+ AI+L++ T + R
Sbjct: 146 VDVSKPTVLLFGNEHSGVSETALHKADGNFVIPMQGYVQSLNISVAAAISLYDVTTRSR 204
>gi|308190283|ref|YP_003923214.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans JER]
gi|319777677|ref|YP_004137328.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans M64]
gi|307625025|gb|ADN69330.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans JER]
gi|318038752|gb|ADV34951.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans M64]
Length = 231
Score = 72.8 bits (177), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 1649 KKITLPKHENQDNSSSSFFGN--REAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQ 1706
K+IT K E +DNS FF N + ++ ++ I ++ ++D +ETI+ +
Sbjct: 37 KQITKAKIEMKDNS---FFANYRNDNHQGVIAILRDFPIYD---------LETIKKDNPE 84
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIA---DANILHDKQFQLISVTAEKWVPIVE 1763
VLV I NL + RT L I+ ANI ++ V++ +V +
Sbjct: 85 NVLVLDHIQDPHNLGAIIRTANTCGIKHLIISKERSANITS----TVLKVSSGGFVNMKI 140
Query: 1764 VPVNSIKHFLERKKHEGF--SVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIH 1821
+ VNSI L + K + V L++TA + +Q F K +VLV+G E +G+ ++
Sbjct: 141 IKVNSISATLTKLKKWNYWIYVSALDETAQKV--NQVTFNKPSVLVVGNEGDGVSKSTLN 198
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
D I IPQ G V+S+NV V+ I L+E T+
Sbjct: 199 EADQVIYIPQKGSVQSMNVSVATGILLYELTK 230
>gi|110636572|ref|YP_676779.1| RNA methylase [Cytophaga hutchinsonii ATCC 33406]
gi|110279253|gb|ABG57439.1| RNA methylase, SpoU family [Cytophaga hutchinsonii ATCC 33406]
Length = 176
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 1695 LAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLIS 1752
+++ET + +++ ++V + + N+ RT + F+ + + +++ +
Sbjct: 12 MSVETFKKTKKTSIIIVLDNVRSLHNVGSFFRTADAFQIEKIYLCGITGTPPNREIHKTA 71
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGR 1810
+ A + V P+ FL + K G+ +L +EQT SI L + K K VL+ G
Sbjct: 72 LGATESVEWEHAPLAV--GFLPKLKANGYQILSIEQTDKSIALQDFSINKENKYVLIFGN 129
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
E G+ ++I + D IEIPQ G S NV V+G I LWE+ R+
Sbjct: 130 EVYGVSEEVIKLSDHAIEIPQFGTKHSFNVSVTGGIVLWEFFRR 173
>gi|449120160|ref|ZP_21756546.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H1-T]
gi|449122565|ref|ZP_21758898.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
MYR-T]
gi|448947555|gb|EMB28399.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
MYR-T]
gi|448948304|gb|EMB29141.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H1-T]
Length = 258
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKQDNQFLDSITKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSIDEFFAKLAEKDSGFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGSFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--DLTFPKKTVLIMGSEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|320170244|gb|EFW47143.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 220
Score = 72.4 bits (176), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
NS+ L+ + EGF ++ LEQ +S + Y F + TVLV+G EK G+ DI+++ D
Sbjct: 129 NSLNSSLQAWRAEGFRIVALEQAVSSKSIYDYRFDRNTVLVIGNEKSGLTQDILNLADDI 188
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+EIP G+ S NV + AIA++EY +Q
Sbjct: 189 LEIPIYGMPYSHNVSAATAIAIYEYCKQ 216
>gi|422341944|ref|ZP_16422884.1| RNA methyltransferase [Treponema denticola F0402]
gi|325474012|gb|EGC77200.1| RNA methyltransferase [Treponema denticola F0402]
Length = 258
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKQDNQFLDSITKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSIDEFFAKLAEKDSGFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAVG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--DLTFPKKTVLIMGSEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|449131211|ref|ZP_21767427.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP37]
gi|448940044|gb|EMB20955.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP37]
Length = 258
Score = 72.4 bits (176), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L++EK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKVEKQDNQFLDSITKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTETENQKKGMSVDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--NLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|449126198|ref|ZP_21762491.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola OTK]
gi|448938390|gb|EMB19321.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola OTK]
Length = 258
Score = 72.4 bits (176), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFFGNR--------EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKKDNQFLDSLTKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSIDEFFAKLAEKDSGFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G + A
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGAD--A 191
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
L FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 192 GGKALSDLTFPKKTVLIMGSEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|333377546|ref|ZP_08469280.1| hypothetical protein HMPREF9456_00875 [Dysgonomonas mossii DSM 22836]
gi|332884280|gb|EGK04548.1| hypothetical protein HMPREF9456_00875 [Dysgonomonas mossii DSM 22836]
Length = 175
Score = 72.4 bits (176), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K G+++ +EQ NSI LD+ KK ++LG E +G+ D++ D C+EIP
Sbjct: 90 VEELKKNGYTLCAVEQAQNSIMLDELQLDSTKKYAVILGNEVKGVQQDVVSRCDCCVEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G SLNV V+ + +WE+++Q
Sbjct: 150 QYGTKHSLNVSVAAGMVIWEFSKQ 173
>gi|298710915|emb|CBJ49268.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 1681
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
LVLGRE G+P+D+I +D C +IPQ GV+RSLN HVSGAI L EY+RQ
Sbjct: 1628 LVLGRENSGLPLDVIGEMDVCCQIPQQGVLRSLNAHVSGAIILAEYSRQ 1676
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 1345 DSGKLFLLGLLDF----VVNDKDLARELYKKYSAIHRRKVRAWQMICILSRFV------D 1394
D G +LG + V++ K+ AR+ + RK+RAWQ +C+L + D
Sbjct: 1229 DQGARAVLGAITVRLMEVLSSKE-ARQAGITDPVAYGRKLRAWQALCVLCGYFCDKASSD 1287
Query: 1395 NDIVGQVTHFLHISLY------RNNLPSVRQYLETFAITIYLKFPSLVAEQLVPILRDYD 1448
D + IS + R LP VRQ++E FA+ + +P L +V L+D+
Sbjct: 1288 GDGHARAKLAKAISEWFWPVHGRTALPPVRQHMEVFAVRMCRAYPDLFLTAVVKELKDFR 1347
Query: 1449 MRPQALSSYVFIAANVILHASKAVQFRHLEDLLPPIVPLLTSHHHSLRGFTQLLVYQVL 1507
+ Q L S + IA + +L + RH + +P + H R QL + VL
Sbjct: 1348 LPGQVLCSLLIIAGHTLLGNESGLSARHRVPMFRACLPWVVGTHVMGRLIAQLFCHSVL 1406
>gi|365108850|ref|ZP_09336648.1| hypothetical protein HMPREF9428_02517 [Citrobacter freundii
4_7_47CFAA]
gi|363640319|gb|EHL79810.1| hypothetical protein HMPREF9428_02517 [Citrobacter freundii
4_7_47CFAA]
Length = 359
Score = 72.0 bits (175), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 206 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 265
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ + G++V+ + + PL P+K VLVLGRE+E +P
Sbjct: 266 PITG---DSIVDVLDDFRQAGYTVV-MTSSGKGKPLFTTTLPEKMVLVLGREREALPEAA 321
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CI I G V +LNV V+ + L E+ RQ +
Sbjct: 322 CSADDLCIAIDGTGKVETLNVSVATGVLLAEWWRQNK 358
>gi|254527012|ref|ZP_05139064.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
gi|221538436|gb|EEE40889.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
Length = 223
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 1714 IDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPIV--EVPVNS 1768
+++ NL+ + RTC+ VF+A+ ++ +A K F + ++KWV + E + +
Sbjct: 29 VNKPHNLSAILRTCDAAGVFEANFISKTNA----VKTFNSTAQGSQKWVKLNNHENTITA 84
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIE 1828
I K++GF + G + S+ + + + T VLG EK G+ ++I M+D I
Sbjct: 85 ISDL----KNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIF 140
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 141 IPMRGMVQSLNVSVAASILLFEAVRQRK 168
>gi|123968010|ref|YP_001008868.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
gi|123198120|gb|ABM69761.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
Length = 223
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 1714 IDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPIV--EVPVNS 1768
+++ NL+ + RTC+ VF+A+ ++ +A K F + ++KWV + E + +
Sbjct: 29 VNKPHNLSAILRTCDAAGVFEANFISKTNA----VKTFNSTAQGSQKWVKLNNHENTITA 84
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIE 1828
I K++GF + G + S+ + + + T VLG EK G+ ++I M+D I
Sbjct: 85 ISDL----KNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIF 140
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 141 IPMRGMVQSLNVSVAASILLFEAVRQRK 168
>gi|449115791|ref|ZP_21752251.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H-22]
gi|448955277|gb|EMB36044.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H-22]
Length = 258
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L++EK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKVEKQDNQFLDSLTKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--DLTFPKKTVLIMGSEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|431798645|ref|YP_007225549.1| rRNA methylase [Echinicola vietnamensis DSM 17526]
gi|430789410|gb|AGA79539.1| rRNA methylase [Echinicola vietnamensis DSM 17526]
Length = 230
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 1689 VLQARSLAMETIRASRQQF-VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
V + ME I A R +F LV I + N + + RTC+ F + I + +D
Sbjct: 18 VTDHKKARMEEILALRSRFFTLVLEDIYKPHNASAVIRTCDCFGIQDIHIIEKANSYDVN 77
Query: 1748 FQLISVTAEKWVPIV---EVP-VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
++ A +WV I E P V+++ E + +G+ +L SIPL +K
Sbjct: 78 -PYVTRGAAQWVDIYKYQETPHVSAVDVCFEELREKGYRILATSPHGESIPLHALEADQK 136
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
T LV G E EG+ ++I D + IP G S N+ VS +I L++
Sbjct: 137 TALVFGNEHEGVSQEVIEKSDGVVHIPMTGFTESFNISVSASICLYD 183
>gi|449128545|ref|ZP_21764791.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP33]
gi|448940953|gb|EMB21857.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP33]
Length = 258
Score = 71.6 bits (174), Expect = 4e-09, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFFGNR--------EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ + F+ EA ++L L+IEK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPNLEIFYSKEGPRVKKILEAARKLNLKIEKKDNQFLDSLTKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T ++++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAENQKKGMSIDEFFAILAEKDSTFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G + A
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGAD--A 191
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
PL FPKKT L++G E +G+ + D + IP G + SLNV V+ I L+E
Sbjct: 192 GGKPLPDLTFPKKTGLIMGSEGKGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|449102701|ref|ZP_21739449.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
AL-2]
gi|448966290|gb|EMB46948.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
AL-2]
Length = 258
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L++EK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKVEKQDNQFLDSITKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T +++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAEDQKKGMSIDEFFAKLAEKDSGFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--NLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|449107300|ref|ZP_21743956.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ASLM]
gi|451968995|ref|ZP_21922224.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
US-Trep]
gi|448962545|gb|EMB43233.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ASLM]
gi|451702167|gb|EMD56596.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
US-Trep]
Length = 258
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 44/245 (17%)
Query: 1649 KKITLPKHENQDNSSSSFF---GNR-----EAYKQL-LEIEKEDELF---------DQVL 1690
+K+ + K +N+ S F+ G R EA ++L L++EK+D F +Q+
Sbjct: 18 EKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKVEKQDNQFLDSITKTLPEQLR 77
Query: 1691 QARSLAMETIRASRQQ-----------------FVLVASLIDRIPNLAGLARTCEVFKAS 1733
R + + T +++ FV++ + N + R+ + F
Sbjct: 78 DHRGIVLVTEAEDQKKGMSIDEFFAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGID 137
Query: 1734 GLAIADANILHDKQFQLIS---VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ + + F++IS A WVP VEV ++ +ER K EGF + G +
Sbjct: 138 GIIVPENK--SAGGFEIISKVSAGALAWVPFVEV--TNLVRTVERLKKEGFWIYGADAGG 193
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++P FPKKTVL++G E G+ + D + IP G + SLNV V+ I L+E
Sbjct: 194 KALP--NLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSLNVSVAAGILLYE 251
Query: 1851 YTRQQ 1855
+R++
Sbjct: 252 ISRKK 256
>gi|198274154|ref|ZP_03206686.1| hypothetical protein BACPLE_00293 [Bacteroides plebeius DSM 17135]
gi|198273232|gb|EDY97501.1| RNA methyltransferase, TrmH family [Bacteroides plebeius DSM 17135]
Length = 221
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
++G++VL +EQ A S LD+ + K K +VLG E +G+ +++ M D CIEIPQ G
Sbjct: 138 NDGYTVLAIEQCAGSTLLDELVLEKGRKYAIVLGNEVKGVQQEVVDMCDGCIEIPQFGTK 197
Query: 1836 RSLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE+ +
Sbjct: 198 HSLNVSVTAGIMIWEFAHK 216
>gi|399024620|ref|ZP_10726653.1| rRNA methylase [Chryseobacterium sp. CF314]
gi|398080070|gb|EJL70898.1| rRNA methylase [Chryseobacterium sp. CF314]
Length = 176
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDA 1825
+I + K G+ V+G+EQT+NS + +M KK L+LG E EGI + + +D
Sbjct: 86 NINTIINDLKSRGYEVVGIEQTSNSTMITDFMVDRSKKYALILGNEVEGISDEALENIDV 145
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+EIPQLG SLNV V G I +WE+ +
Sbjct: 146 FLEIPQLGTKHSLNVSVCGGIVMWEFAK 173
>gi|395227082|ref|ZP_10405410.1| rna methyltransferase [Citrobacter sp. A1]
gi|424731623|ref|ZP_18160205.1| rna methyltransferase [Citrobacter sp. L17]
gi|394719265|gb|EJF24870.1| rna methyltransferase [Citrobacter sp. A1]
gi|422893761|gb|EKU33577.1| rna methyltransferase [Citrobacter sp. L17]
gi|455641295|gb|EMF20466.1| methyltransferase [Citrobacter freundii GTC 09479]
Length = 359
Score = 71.2 bits (173), Expect = 5e-09, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 206 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 265
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ ++ G++V+ + + PL P+K VLVLGRE+E +P
Sbjct: 266 PITG---DSIVDVLDDFRNAGYTVV-MTSSVKGKPLFTTTLPEKMVLVLGREREALPEAA 321
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C+ I G V +LNV V+ + L E+ RQ +
Sbjct: 322 CSADDLCVAIDGTGKVETLNVSVATGVLLAEWWRQNK 358
>gi|326336260|ref|ZP_08202431.1| tRNA/rRNA methyltransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691434|gb|EGD33402.1| tRNA/rRNA methyltransferase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 221
Score = 71.2 bits (173), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 1689 VLQARSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
+ Q R I A R Q+ VA I ++ N + + RTCEVF I + + K+
Sbjct: 15 ITQERKERFSQILAQRTQYFTVAIEDIFQMHNTSAVVRTCEVFGVQTTHIIEKK--YGKR 72
Query: 1748 FQ-LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
I++ AEKWV I ++ + +E K +G+ ++ ++IPL+ + K+
Sbjct: 73 LDSKIAMGAEKWVTIKRY--SNTQSCIEELKLQGYRIVATVPAPSAIPLEHFNIDAKSAF 130
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G E++G+ ++I D + IP +G SLN+ VS AI L T + R
Sbjct: 131 FFGTERDGLSQEVISQADEFLTIPMVGFTESLNISVSVAIILQYLTNKLR 180
>gi|421845360|ref|ZP_16278514.1| methyltransferase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411773263|gb|EKS56822.1| methyltransferase [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 359
Score = 71.2 bits (173), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 206 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 265
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ ++ G++V+ + + PL P+K VLVLGRE+E +P
Sbjct: 266 PITG---DSIVDVLDDFRNAGYTVV-MTSSVKGKPLFTTALPEKMVLVLGREREALPEAA 321
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C+ I G V +LNV V+ + L E+ RQ +
Sbjct: 322 CSADDLCVAIDGTGKVETLNVSVATGVLLAEWWRQNK 358
>gi|420367431|ref|ZP_14868217.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 1235-66]
gi|391323262|gb|EIQ79924.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 1235-66]
Length = 359
Score = 70.9 bits (172), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 206 QAGAQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 265
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ ++ G++V+ + + PL P+K VLVLGRE+E +P
Sbjct: 266 PITG---DSIVDVLDDFRNAGYTVV-MTSSVKGKPLFTTTLPEKMVLVLGREREALPEAA 321
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C+ I G V +LNV V+ + L E+ RQ +
Sbjct: 322 CSADDLCVAIDGTGNVETLNVSVATGVLLAEWWRQNK 358
>gi|423131492|ref|ZP_17119167.1| hypothetical protein HMPREF9714_02567 [Myroides odoratimimus CCUG
12901]
gi|371641908|gb|EHO07487.1| hypothetical protein HMPREF9714_02567 [Myroides odoratimimus CCUG
12901]
Length = 226
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 1661 NSSSSFFGNREAYKQLLEI---EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRI 1717
N S+ F + + Y + LE E E F +VL+ R+ F +VA + ++
Sbjct: 2 NISNKLFQDVD-YLEYLETFLTENRVERFKEVLKDRT----------NHFTVVAEDVYQL 50
Query: 1718 PNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
N + + R+CEVF L + + DK+ I++ AEKWV I SI +E
Sbjct: 51 HNTSAVMRSCEVFGVQDLHVIEQKFGKRIDKE---IALGAEKWVDIHRYA--SIPTAIED 105
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
+ +G+ ++ + L+ + K + + G EK G+ +II DA I+IP +G
Sbjct: 106 IRKKGYQIVATTPHVEANHLEDFDISKPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFT 165
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
SLN+ VS AI + T + R
Sbjct: 166 ESLNISVSAAIIIQNLTTRVR 186
>gi|373109839|ref|ZP_09524114.1| hypothetical protein HMPREF9712_01707 [Myroides odoratimimus CCUG
10230]
gi|423327905|ref|ZP_17305713.1| hypothetical protein HMPREF9711_01287 [Myroides odoratimimus CCUG
3837]
gi|371644185|gb|EHO09725.1| hypothetical protein HMPREF9712_01707 [Myroides odoratimimus CCUG
10230]
gi|404605906|gb|EKB05477.1| hypothetical protein HMPREF9711_01287 [Myroides odoratimimus CCUG
3837]
Length = 226
Score = 70.9 bits (172), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 1661 NSSSSFFGNREAYKQLLEI---EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRI 1717
N S+ F + + Y + LE E E F +VL+ R+ F +VA + ++
Sbjct: 2 NISNKLFQDVD-YLEYLETFLTENRVERFKEVLKDRT----------NHFTVVAEDVYQL 50
Query: 1718 PNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
N + + R+CEVF L + + DK+ I++ AEKWV I SI +E
Sbjct: 51 HNTSAVMRSCEVFGVQDLHVIEQKFGKRIDKE---IALGAEKWVDIHRYA--SIPTAIED 105
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
+ +G+ ++ + L+ + K + + G EK G+ +II DA I+IP +G
Sbjct: 106 IRKKGYQIVATTPHVEANHLEDFDISKPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFT 165
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
SLN+ VS AI + T + R
Sbjct: 166 ESLNISVSAAIIIQNLTTRVR 186
>gi|410463459|ref|ZP_11316973.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983423|gb|EKO39798.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 196
Score = 70.9 bits (172), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 1685 LFDQVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
+ D + + R +E + A RQ LV + I N++ + R+C+ F I ++L
Sbjct: 1 MRDCITERRVRRIEEVLARRQTDLTLVINNIHDPHNVSAILRSCDAF-----GIHRVHLL 55
Query: 1744 H-DKQFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ D F + S +A+KWV V K +GF ++ T ++PL ++
Sbjct: 56 YTDTAFPALGKKSSGSAKKWVETVRH--KDAASLAATLKGQGFRLVATSFTETAVPLQKW 113
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
KT ++LG E G+ D+ +D + IP +G+V+SLNV V+ A+ L+E RQ
Sbjct: 114 DLTTKTAIILGNEHSGVDEDLAPHVDGALYIPMMGMVQSLNVSVAAAVILYEGFRQ 169
>gi|399928166|ref|ZP_10785524.1| putative tRNA/rRNA methyltransferase [Myroides injenensis M09-0166]
Length = 226
Score = 70.9 bits (172), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 1661 NSSSSFFGNREAYKQLLE---IEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRI 1717
N S F + E Y + LE E E F +VL+ R+ + +VA + ++
Sbjct: 2 NISKKLFQDIE-YLEYLESFLTESRVERFKEVLKNRT----------RHITIVAEDVYQL 50
Query: 1718 PNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
N + + R+CEVF L + + DK+ I++ AEKWV I N++++ ++
Sbjct: 51 HNTSAVMRSCEVFGVQDLRVIEQKFGKRIDKE---IALGAEKWVDIHRY--NTVQNSIDD 105
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
+ +G+ ++ ++ L+ + K + + G EK G+ +II D I+IP +G
Sbjct: 106 IRAQGYQIVATTPHVDAFHLEDFDITKPSAVFFGTEKSGLSPEIIEQADTYIKIPMVGFT 165
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
SLN+ VS AI + T + R
Sbjct: 166 ESLNISVSAAIIIQNLTTRIR 186
>gi|317485615|ref|ZP_07944491.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345886027|ref|ZP_08837307.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
gi|316923152|gb|EFV44362.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345041427|gb|EGW45584.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
Length = 196
Score = 70.9 bits (172), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 1688 QVLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
++ + R +E + RQ+ LV + I N++ + R+ + F + L + + +
Sbjct: 4 EITERRRAKLERVLRWRQKDLTLVLANIHDPHNVSAIYRSADAFGVAALHLYYTDTAFPE 63
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
+ S +A KWV V S + K G +L T S PL Y F K T +
Sbjct: 64 LGKKSSASARKWVESVRH--RSAEELYAALKAGGHQILATSCTPESKPLGAYDFTKPTAV 121
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++G E G+P ++ ++D + IP G+++S NV V+ A+ L E +RQ+
Sbjct: 122 IMGNEHSGVPAELNSLVDGEVYIPMYGMIQSFNVSVAAAVILSEASRQR 170
>gi|409197122|ref|ZP_11225785.1| tRNA/rRNA methyltransferase (spou) [Marinilabilia salmonicolor JCM
21150]
Length = 182
Score = 70.5 bits (171), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAE---K 1757
+ + ++V + + N+ + RT + F+ + + + K+ ++ AE K
Sbjct: 20 SPKTPIIVVLDNVRSLHNVGSIFRTSDAFRLEAVYLCGITSAPPHKEIHKTALGAEDSVK 79
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGI 1815
W N +E+ K G+ +LG+EQ S PL+++ +K ++LG E +G+
Sbjct: 80 WQYF-----NETTEAIEKLKSNGYLLLGIEQVEKSTPLEEFQTDTQQKYAVILGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+I + D C+EIPQ G S NV VS I LWE +++
Sbjct: 135 DQKVIDLCDKCLEIPQFGTKHSFNVSVSAGIVLWELSKK 173
>gi|375013599|ref|YP_004990587.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
gi|359349523|gb|AEV33942.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
Length = 175
Score = 70.5 bits (171), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD--ANILHDK--QFQLISVTAEK 1757
A + VLV + + N+ + RT + F+ L + A H + + L + +
Sbjct: 20 APKNPIVLVLDNVRSLLNVGSVFRTSDAFRVEELHLCGLTATPPHREMNKTALGATESVS 79
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGI 1815
W VE +S+K K +G++++ +EQT+ +I L+Q+ F + K L+ G E +G+
Sbjct: 80 WRHFVETS-DSLKDL----KEKGYTLIAIEQTSGAISLEQFPFEQHDKVALIFGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ + + D IEIPQ G SLN+ VS IALW+ QRF
Sbjct: 135 SNEALALCDFAIEIPQFGTKHSLNISVSAGIALWQAA--QRF 174
>gi|390953016|ref|YP_006416774.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
gi|390419002|gb|AFL79759.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
Length = 219
Score = 70.5 bits (171), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 1683 DELFDQVLQARSLAMETIRASR-QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
D L + + R+ + + + R + F +V + ++ N + + RTC+VF L + +
Sbjct: 7 DHLQTYLTEHRNTRFQKVLSERTRHFTVVTEDVYQLHNTSAVMRTCDVFGIQDLHVVEEK 66
Query: 1742 ILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+ DK+ I++ A+KWV +SIK + K G+ ++ NS L ++
Sbjct: 67 VSKRIDKE---IAMGAQKWVDFKRY--HSIKECISNLKSSGYQIIATTPHENSTMLHEFD 121
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
KK+ G+E +G+ +++ D ++IP G SLN+ VS AI L
Sbjct: 122 VSKKSAFFFGKETDGLSDTVMNAADGFLKIPMYGFTESLNISVSAAIIL 170
>gi|423135238|ref|ZP_17122884.1| hypothetical protein HMPREF9715_02659 [Myroides odoratimimus CIP
101113]
gi|371643319|gb|EHO08875.1| hypothetical protein HMPREF9715_02659 [Myroides odoratimimus CIP
101113]
Length = 226
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)
Query: 1661 NSSSSFFGNREAYKQLLEI---EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRI 1717
N S+ F + + Y + LE E E F +VL+ R+ F +VA + ++
Sbjct: 2 NISNKLFQDVD-YLEYLETFLTENRVERFKEVLKDRT----------NHFTVVAEDVYQL 50
Query: 1718 PNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
N + + R+CEVF L + + DK+ I++ AEKWV I SI +E
Sbjct: 51 HNTSAVMRSCEVFGVQDLHVIEQKFGKRIDKE---IALGAEKWVDIHRYA--SIPTAIED 105
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
+ +G+ ++ + L+ + K + + G EK G+ +II DA I+IP +G
Sbjct: 106 IRKKGYQIVATTPHLEANHLEDFDISKPSAIFFGTEKNGLSPEIIEQADAYIKIPMVGFT 165
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
SLN+ VS AI + T + R
Sbjct: 166 ESLNISVSAAIIIQNLTTRVR 186
>gi|357061009|ref|ZP_09121770.1| hypothetical protein HMPREF9332_01327 [Alloprevotella rava F0323]
gi|355375234|gb|EHG22522.1| hypothetical protein HMPREF9332_01327 [Alloprevotella rava F0323]
Length = 178
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVP 1760
A + V+V I + N+ + RT + F+ + + +Q ++ AE V
Sbjct: 20 AEKLPVVMVLDNIRSLHNVGSVFRTADAFRLQRVCLCGITGCPPQQEIHKTALGAEDSVD 79
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVD 1818
P + + L + EG+++ +EQ S+ LD+ + LV+G E +G+
Sbjct: 80 WQYYP--TTEEALAALRAEGYTIYSIEQVEGSLKLDEISLSSNGRYALVMGNEVKGVQQQ 137
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
++ DACIEIPQ G SLNV V+ I +WE+ RQ F
Sbjct: 138 VVDASDACIEIPQFGTKHSLNVSVTAGIVMWEFARQLGF 176
>gi|260885962|ref|ZP_05897293.1| RNA methylase, SpoU family [Prevotella tannerae ATCC 51259]
gi|260851105|gb|EEX70974.1| RNA methylase, SpoU family [Prevotella tannerae ATCC 51259]
Length = 179
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN----ILHDKQFQLISVTAEK 1757
A + V+V + + N+ + RT + F+ SG+ + ++ + L + +
Sbjct: 20 APKLPLVVVLDNVRSLHNVGSVFRTADAFRLSGVCLCGITGRPPMVEIHKTALGAEDSVD 79
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGI 1815
W E P+ +++ R G+ + +EQ A S PL Q +K LVLG E +G+
Sbjct: 80 W-EYFEDPLAAVEALRRR----GYLIFAVEQVAGSRPLHQLRLSPDQKYALVLGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
++ DA +EIPQ G SLNV VS I LWE+ +Q F
Sbjct: 135 TQSVVDASDAAVEIPQYGTKHSLNVSVSAGIVLWEFAKQLGF 176
>gi|189462421|ref|ZP_03011206.1| hypothetical protein BACCOP_03108 [Bacteroides coprocola DSM 17136]
gi|189430859|gb|EDU99843.1| RNA methyltransferase, TrmH family [Bacteroides coprocola DSM 17136]
Length = 180
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
EG++VL +EQ S LD + KK +V+G E +G+ +++ M D CIEIPQ G
Sbjct: 99 EGYTVLAIEQCEGSTMLDHLVLDPNKKYAIVMGNEVKGVQQEVVDMCDGCIEIPQYGTKH 158
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I LWE+ +
Sbjct: 159 SLNVSVTTGIVLWEFANK 176
>gi|328949218|ref|YP_004366555.1| TrmH family RNA methyltransferase [Treponema succinifaciens DSM 2489]
gi|328449542|gb|AEB15258.1| RNA methyltransferase, TrmH family, group 3 [Treponema succinifaciens
DSM 2489]
Length = 258
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 1719 NLAGLARTCEVFKASGLAIAD---ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
N+ + R+C+ F AS + + D A+I +++ S A WV + +VP ++ ++
Sbjct: 120 NVGAILRSCDQFGASLMVVPDHRSADINNNEIIARASAGASSWVDVAKVP--NLVRAVQI 177
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
K GF + G + A L + FPKKT +++G E GI + D + IP G +
Sbjct: 178 LKSAGFWIYGAD--AGGTTLSKIKFPKKTCIIMGSEGSGIARLLQEQCDEIVSIPTCGKI 235
Query: 1836 RSLNVHVSGAIALWEYTRQQ 1855
SLNV V+ + L+E RQ+
Sbjct: 236 DSLNVSVAAGVLLYEAYRQK 255
>gi|123965718|ref|YP_001010799.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9515]
gi|123200084|gb|ABM71692.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9515]
Length = 224
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 13/158 (8%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+ ++ +++ NL+ + RTC+ VF+A+ + D K F + ++KWV +
Sbjct: 20 ENLTVLVEAVNKPHNLSAILRTCDAAGVFEANFICKRD----EVKTFNSTAQGSQKWVKL 75
Query: 1762 V--EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
E ++++ H K +GF + G +S + + + T VLG EK G+ ++
Sbjct: 76 NNHETTISAVSHL----KKKGFKLYGTTLNDSSTDYRNFDYAENTCFVLGAEKWGLSDEL 131
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I +D I IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 132 ISKVDESIFIPMTGMVQSLNVSVAASILLFEAIRQRQI 169
>gi|88803205|ref|ZP_01118731.1| spoU protein [Polaribacter irgensii 23-P]
gi|88780771|gb|EAR11950.1| spoU protein [Polaribacter irgensii 23-P]
Length = 225
Score = 69.7 bits (169), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E +LF +VL+ R+ + F +V I + N + + RTC++F + A
Sbjct: 16 ENRKKLFQKVLENRT----------RHFTVVLEDIFQPHNASAVVRTCDIFGIQDVH-AI 64
Query: 1740 ANILHDKQFQLISVTAEKWVPIVEVPVN--SIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
N + K + ++ ++KW+ + + K L+ K +G+ ++ NS L
Sbjct: 65 ENKYNTKVSRHVAKGSQKWLNQYRYRSDGDNTKECLDGLKEKGYQIIATSPHNNSCVLQD 124
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ F KKT V G E EG+ +I D ++IP +G SLN+ V+ AI L E T + R
Sbjct: 125 FDFTKKTAFVFGVEAEGVSDCVIENADGFLKIPMVGFTESLNISVAAAIILQEVTAKLR 183
>gi|345867234|ref|ZP_08819251.1| spoU rRNA Methylase family protein [Bizionia argentinensis JUB59]
gi|344048448|gb|EGV44055.1| spoU rRNA Methylase family protein [Bizionia argentinensis JUB59]
Length = 211
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
+K E F++VL R+ + F + + ++ N + + R+C+VF + I +
Sbjct: 7 DKRREKFNKVLSGRT----------KHFTVATEDVYQLHNTSAVMRSCDVFGIQEVHIVE 56
Query: 1740 ANILHDKQFQ-LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
++ K I++ A+KWV + + +K L+ K EG+ ++ N L ++
Sbjct: 57 E--VNSKSIDGEIAMGAQKWVDLNRH--HHVKDALKSLKEEGYQIVATTPHTNDCLLHEF 112
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
KK+ GRE EG+ D++ D ++IP G SLN+ VS AI L + T
Sbjct: 113 DVTKKSCFFFGRETEGLSQDVLDSADCFLKIPMTGFTESLNISVSAAIILQDVT 166
>gi|126695780|ref|YP_001090666.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9301]
gi|126542823|gb|ABO17065.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9301]
Length = 223
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+ ++ +++ NL+ + RTC+ VF+A+ ++ +A K F + ++KWV +
Sbjct: 20 KNLTVLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNA----VKTFNSTAQGSQKWVKL 75
Query: 1762 V--EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
E + +I K++GF + G + S+ + + + T VLG EK G+ ++
Sbjct: 76 NNHENTITAISDL----KNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNEL 131
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
M+D I IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 132 KSMVDQSIFIPMRGMVQSLNVSVAASILLFEAVRQRK 168
>gi|239907184|ref|YP_002953925.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
gi|239797050|dbj|BAH76039.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
Length = 196
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 1685 LFDQVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
+ D + + R +E + + RQ LV + I N++ + R+C+ F I ++L
Sbjct: 1 MRDCITERRVRRIEEVLSRRQTDLTLVINNIHDPHNVSAILRSCDAF-----GIHRVHLL 55
Query: 1744 H-DKQFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ D F + S +A+KWV V K +GF ++ T ++PL ++
Sbjct: 56 YTDTAFPALGKKSSGSAKKWVETVRH--KDAASLAAALKGQGFRLVATSFTETAVPLQKW 113
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
KT ++LG E G+ D+ +D + IP +G+V+SLNV V+ A+ L+E RQ
Sbjct: 114 DLTTKTAIILGNEHSGVDEDLAPHVDGALYIPMMGMVQSLNVSVAAAVILYEGFRQ 169
>gi|220919411|ref|YP_002494715.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957265|gb|ACL67649.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 225
Score = 69.3 bits (168), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 1689 VLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
VL R ++ + A+R + +V N+ + RTCE F L + + +
Sbjct: 9 VLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGVQTLHAIEGPMKPYDR 68
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ IS A+KW+ + +S L + EGF++ S P+ F K LV
Sbjct: 69 NKKISQNADKWLDVRRW--SSTAECLAHLRSEGFAIYATHLGERSTPMAGLSFAGKVALV 126
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
G E+ G+ + + + DAC IP G V+SLNV V+ AI+L
Sbjct: 127 FGNEQRGVSEEALALADACYAIPMRGFVQSLNVSVAAAISL 167
>gi|15606763|ref|NP_214143.1| rRNA methylase SpoU [Aquifex aeolicus VF5]
gi|3915169|sp|O67577.1|TRMH_AQUAE RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|75765771|pdb|1ZJR|A Chain A, Crystal Structure Of A. Aeolicus TrmhSPOU TRNA MODIFYING
ENZYME
gi|2983982|gb|AAC07528.1| rRNA methylase SpoU [Aquifex aeolicus VF5]
Length = 211
Score = 69.3 bits (168), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 3/168 (1%)
Query: 1689 VLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
VL+ R + + RQ+ ++ A + N + + RTC+ L A K
Sbjct: 7 VLEKRLKRLREVLEKRQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGKKAKI 66
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ I+ + KWV I +V N ++ LE K + GF ++ + S+ + + K TVLV
Sbjct: 67 NEGITQGSHKWVFIEKVD-NPVQKLLEFK-NRGFQIVATWLSKESVNFREVDYTKPTVLV 124
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+G E +G+ +I+ + D I IP G+ +SLNV V+ I L+E RQ+
Sbjct: 125 VGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQR 172
>gi|365833909|ref|ZP_09375361.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
gi|364570957|gb|EHM48558.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
Length = 199
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ RTC F GL + DA++L TAE ++ + + L+ +
Sbjct: 64 NLGGIMRTCAHFGVKGLMVQDASMLESGA---AVRTAEGGAEHIQAIDADGFDGALDEFR 120
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + PL + PKK VLVLG+E++G+ ++ D + I G V S
Sbjct: 121 RAGYTIVTTSSHKGTTPLTKATLPKKMVLVLGQERDGLSETVMQQGDLSLSIGGTGQVES 180
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV V+ I L E+ RQ
Sbjct: 181 LNVSVATGILLAEWWRQ 197
>gi|317493379|ref|ZP_07951801.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918772|gb|EFV40109.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 371
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ RTC F GL + DA++L TAE ++ + + L+ +
Sbjct: 236 NLGGIMRTCAHFGVKGLMVQDASMLESGA---AVRTAEGGAEHIQAIDADGFDGALDEFR 292
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + PL + PKK VLVLG+E++G+ ++ D + I G V S
Sbjct: 293 RAGYTIVTTSSHKGTTPLTKATLPKKMVLVLGQERDGLSETVMQQGDLSLSIGGTGQVES 352
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV V+ I L E+ RQ
Sbjct: 353 LNVSVATGILLAEWWRQ 369
>gi|87303170|ref|ZP_01085968.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp.
WH 5701]
gi|87282337|gb|EAQ74297.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp.
WH 5701]
Length = 229
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 1698 ETIRASRQQ----FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL----HDKQFQ 1749
E IRA + +V +D+ NL+ + R+C+ + + +A+++ + F
Sbjct: 9 ERIRAVLDRRMADLTVVLEAVDKPHNLSAILRSCD-----AVGVLEAHVVSLKGRPRTFN 63
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+ ++KWVP+ P ++ L + K +GF + G + +++ Q F T +LG
Sbjct: 64 STAQGSQKWVPLR--PHERVEEVLGQLKQQGFRLYGTQLGTDAVDYRQCDFTGPTAFLLG 121
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
EK G+ M+D + IP G+V+SLNV V+ A+ L+E RQ++
Sbjct: 122 AEKWGLSEAAAAMVDQALFIPTGGMVQSLNVSVAAAVLLFEALRQRQ 168
>gi|86160595|ref|YP_467380.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777106|gb|ABC83943.1| tRNA/rRNA methyltransferase, SpoU [Anaeromyxobacter dehalogenans
2CP-C]
Length = 225
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 1689 VLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
VL R ++ + A+R + +V N+ + RTCE F L + + +
Sbjct: 9 VLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGIQTLHAVEGPMKPYDR 68
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ IS A+KW+ + +S L + EGF++ S P+ F K LV
Sbjct: 69 NKKISQNADKWLDVRRW--SSTAECLAHLRSEGFAIYATHLGERSTPMAGLSFAGKVALV 126
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
G E+ G+ + + + DAC IP G V+SLNV V+ AI+L
Sbjct: 127 FGNEQRGVSEEALAVADACYAIPMRGFVQSLNVSVAAAISL 167
>gi|390566444|ref|ZP_10246826.1| RNA methyltransferase, TrmH family, group 3 [Nitrolancetus
hollandicus Lb]
gi|390170308|emb|CCF86175.1| RNA methyltransferase, TrmH family, group 3 [Nitrolancetus
hollandicus Lb]
Length = 245
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+R + + +L+ + + NL L RT E A+GL + + H +V
Sbjct: 91 LREANGKTILLLDHLQDVQNLGTLIRTAEATGAAGLILPE----HRSAGITPAVVNASAG 146
Query: 1760 PIVEVPVNSIKHF---LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
+ +PV + + +E+ K G+ + LE + S P+ Q P+ VLV+G E +G+
Sbjct: 147 AVEHLPVALVANLARAIEQCKEAGYWAIALELSPASRPIYQASIPQPAVLVIGSEGKGVS 206
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++ D + +P G V SLN V+G+IAL+E R+Q
Sbjct: 207 PVVLKHCDLQVHLPMFGKVESLNAAVAGSIALYELVRRQ 245
>gi|197124691|ref|YP_002136642.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter sp. K]
gi|196174540|gb|ACG75513.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter sp. K]
Length = 225
Score = 68.6 bits (166), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 3/161 (1%)
Query: 1689 VLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
VL R ++ + A+R + +V N+ + RTCE F L + + +
Sbjct: 9 VLPERRARIDAVVANRTRTLTVVMEAFCDPQNVNAVLRTCEAFGVQTLHAIEGPMKPYDR 68
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ IS A+KW+ + +S L + EGF+V S P+ F K LV
Sbjct: 69 NKKISQNADKWLDVRRW--SSTTECLAHLRAEGFAVYATHLGERSRPMAGLSFAGKVALV 126
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
G E+ G+ + + + DAC IP G V+SLNV V+ AI+L
Sbjct: 127 FGNEQRGVSEEALALADACYAIPMRGFVQSLNVSVAAAISL 167
>gi|319957044|ref|YP_004168307.1| tRNA guanosine-2'-o-methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419448|gb|ADV46558.1| tRNA guanosine-2'-O-methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 217
Score = 68.6 bits (166), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 69/138 (50%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N++ + RT + + A N H L++ A +W+ +P FL +K+
Sbjct: 40 NMSAVIRTADAVGVLDIFYARNNPQHVPVHTLVTQGAHRWLRRHRIPYEERAEFLRKKRE 99
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG ++ S+ + + T+LVLG E+EG+ +++ + IP G+V+SL
Sbjct: 100 EGMQIVVTHLEEASLDFRDVDYTRPTMLVLGNEREGVSPEVLAEASHSVIIPMHGMVQSL 159
Query: 1839 NVHVSGAIALWEYTRQQR 1856
N+ V+ A+ L+E RQ++
Sbjct: 160 NISVAAALILYEAERQRK 177
>gi|333382357|ref|ZP_08474027.1| hypothetical protein HMPREF9455_02193 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828668|gb|EGK01360.1| hypothetical protein HMPREF9455_02193 [Dysgonomonas gadei ATCC
BAA-286]
Length = 175
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K GF++ +EQ SI LD+ + K +VLG E +G+ +++ + D CIEIPQ G
Sbjct: 94 KDRGFTICAIEQAERSIMLDELVVDKAKGYAVVLGNEVKGVRQEVVDLCDCCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE+ +Q
Sbjct: 154 KHSLNVSVAAGIVIWEFFKQ 173
>gi|407451634|ref|YP_006723358.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
gi|403312618|gb|AFR35459.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
Length = 176
Score = 68.6 bits (166), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ S+ V+V I + N+ L RT + F + + I + I A
Sbjct: 20 KTSKTPLVVVLDNIRSMHNVGALFRTADAFLIEKIVLC--GITPQPPHREIHKAALGATE 77
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPV 1817
V+ V I ++ K +G++++G+EQT +SI L + +K LVLG E EG+
Sbjct: 78 SVDWVYQKDISEAIKELKTQGYNIIGVEQTTDSISLSDFEISPNQKYALVLGNEVEGLSD 137
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
+ + + D+ IEIPQLG SLNV V G I +W +
Sbjct: 138 ETLSLYDSFIEIPQLGTKHSLNVSVCGGIVIWSF 171
>gi|189346347|ref|YP_001942876.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
gi|189340494|gb|ACD89897.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
Length = 219
Score = 68.6 bits (166), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA--EKWVPIVEV 1764
+V +++ NLA L R+C+ A+G+ A F + A KWV I
Sbjct: 21 LTVVMDNVNKSHNLAALVRSCD---AAGIHEIHAVSRRKHIFTRHNAAAGSSKWVNIN-- 75
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
+ I+ R + +G VL T S+ + + T L+LG E +GI D I D
Sbjct: 76 LYHDIESVYRRLRDDGMQVLAAASTEKSVDFREIDYTLPTALILGAEWDGISEDAISGAD 135
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
CI +P G+V SLNV V+GA+ ++E RQ+
Sbjct: 136 RCIGVPMFGMVESLNVSVAGAVIIYEAQRQR 166
>gi|332881584|ref|ZP_08449233.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357045666|ref|ZP_09107301.1| RNA methyltransferase, TrmH family [Paraprevotella clara YIT 11840]
gi|332680582|gb|EGJ53530.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355531528|gb|EHH00926.1| RNA methyltransferase, TrmH family [Paraprevotella clara YIT 11840]
Length = 180
Score = 68.6 bits (166), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K EG+ V +EQ SI L + KK ++LG E +G+ +++ D CIEIP
Sbjct: 94 VEHLKAEGYEVWAVEQVEGSIMLQDFQPDKAKKYAIILGNEVKGVQQEVVDQCDGCIEIP 153
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Q G SLNV V+ I +WE+ R+ +
Sbjct: 154 QFGTKHSLNVSVTAGILVWEFARKMKL 180
>gi|150009602|ref|YP_001304345.1| tRNA/rRNA methyltransferase [Parabacteroides distasonis ATCC 8503]
gi|256838324|ref|ZP_05543834.1| tRNA/rRNA methyltransferase [Parabacteroides sp. D13]
gi|262383110|ref|ZP_06076247.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_33B]
gi|423333966|ref|ZP_17311747.1| hypothetical protein HMPREF1075_03398 [Parabacteroides distasonis
CL03T12C09]
gi|149938026|gb|ABR44723.1| tRNA/rRNA methyltransferase [Parabacteroides distasonis ATCC 8503]
gi|256739243|gb|EEU52567.1| tRNA/rRNA methyltransferase [Parabacteroides sp. D13]
gi|262295988|gb|EEY83919.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_33B]
gi|409226801|gb|EKN19707.1| hypothetical protein HMPREF1075_03398 [Parabacteroides distasonis
CL03T12C09]
Length = 176
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+V + L E + S++ ++V I + N+ + RT + F+ + + +
Sbjct: 5 KVTELNRLTPEAFKESKKIPLIVVLDHIRSLNNVGSVFRTSDAFRVEAIYLCGITACPPN 64
Query: 1746 KQFQLISVTAEK---WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF-- 1800
+ ++ AE+ W + P +++ + EG++V +EQ S+ LD
Sbjct: 65 AEIHKTALGAEETVDWEYFKDTP-----EAVDKLRQEGYTVCAVEQAEGSVMLDNLQLDK 119
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
KK +V+G E +G+ +++ D CIEIPQ G SLNV V+ I +W++ +Q
Sbjct: 120 TKKYAIVMGNEVKGVQQNVVDNCDICIEIPQYGTKHSLNVSVTTGIVIWDFFKQ 173
>gi|150025852|ref|YP_001296678.1| tRNA/rRNA methyltransferase [Flavobacterium psychrophilum JIP02/86]
gi|149772393|emb|CAL43873.1| Probable tRNA/rRNA methyltransferase [Flavobacterium psychrophilum
JIP02/86]
Length = 217
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 21/177 (11%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
E F +VL+ R+ F + I ++ N + + R+CEVF I + N++
Sbjct: 20 EKFLKVLENRT----------NHFTIAVEDIFQMHNTSAVMRSCEVF-----GIQELNVI 64
Query: 1744 HDKQFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
++ + I ++ A+KWV I +S+ + +E K++G+ ++ N L+ +
Sbjct: 65 EERYGKSIDKEIAMGAQKWVDIN--TFDSVTNCIESLKNKGYQIIATTPHENDCLLEDFD 122
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K + L G E++G+ +I+ D ++IP +G SLN+ VS AI + T + R
Sbjct: 123 ISKPSALFFGTERDGLSEEILKQADGFLKIPMVGFTESLNISVSAAIIIQNLTERLR 179
>gi|374599828|ref|ZP_09672830.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|423324989|ref|ZP_17302830.1| hypothetical protein HMPREF9716_02187 [Myroides odoratimimus CIP
103059]
gi|373911298|gb|EHQ43147.1| tRNA/rRNA methyltransferase (SpoU) [Myroides odoratus DSM 2801]
gi|404606998|gb|EKB06532.1| hypothetical protein HMPREF9716_02187 [Myroides odoratimimus CIP
103059]
Length = 175
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKAS-----GLAIADANI-LHDKQFQLISVTA 1755
+ + ++V + + N+ + RTC+ F G+ N +H A
Sbjct: 20 SDKTPIIVVLDDVRSLHNIGSVFRTCDAFLVEKVYLCGITATPPNKEIHKTALGATETVA 79
Query: 1756 EKWVP-IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREK 1812
++ +VEV +ER K EG SV +EQ NS+ L+ + +K LV G E
Sbjct: 80 WEYAKDVVEV--------VERLKAEGVSVQAIEQVENSVMLNDFQIEDGQKYALVFGNEV 131
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ ++ + D IEIPQ+G SLN+ VS I +W+ +Q R
Sbjct: 132 KGVSQGVVDLSDGVIEIPQIGTKHSLNIAVSTGIVIWDLFQQMR 175
>gi|365875733|ref|ZP_09415259.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442587402|ref|ZP_21006219.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
gi|365756578|gb|EHM98491.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442562843|gb|ELR80061.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
Length = 176
Score = 68.2 bits (165), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
L++ K EG+ +L +EQT SI L++ + K K V+++G E +G+ + + + D IEIP
Sbjct: 91 LQKLKSEGYKILAIEQTTGSIALNEQVISKDEKYVVIMGNEVDGVSDEALALCDGFIEIP 150
Query: 1831 QLGVVRSLNVHVSGAIALWEY 1851
QLG SLNV V I +WE+
Sbjct: 151 QLGTKHSLNVSVCAGIIMWEF 171
>gi|315917823|ref|ZP_07914063.1| 23S rRNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
gi|317059492|ref|ZP_07923977.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_5R]
gi|313685168|gb|EFS22003.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_5R]
gi|313691698|gb|EFS28533.1| 23S rRNA methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
Length = 237
Score = 67.8 bits (164), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH- 1744
FD++L E + Q +L+ I N L R+ EVF + I + N +
Sbjct: 75 FDEIL-------ENMARKSQSIILILDEIQDPRNFGALIRSAEVFGVDAIIIPERNSVRI 127
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
++ S A ++VPIV+V ++ + +E+ K + V G A S ++ +P+K
Sbjct: 128 NETVVKTSTGAIEYVPIVKV--TNLSNTIEKLKKIDYWVYGAAGEAESSSAEE-QYPQKV 184
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
VLVLG E G+ + D I+IP G + SLNV V+G I L E +
Sbjct: 185 VLVLGNEGTGLRKKVREYCDKLIKIPMRGKINSLNVSVAGGILLSEIAK 233
>gi|255532027|ref|YP_003092399.1| tRNA/rRNA methyltransferase SpoU [Pedobacter heparinus DSM 2366]
gi|255345011|gb|ACU04337.1| tRNA/rRNA methyltransferase (SpoU) [Pedobacter heparinus DSM 2366]
Length = 176
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K +G+ ++G+EQ A S L+ Y + KK L+ G E G+ +++ +D CIEIPQ G
Sbjct: 94 KADGYHIIGIEQAAGSTMLNTYKPTYSKKYALIFGNEVNGVSDEVMAQIDECIEIPQFGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
S N+ +S I LW++ + R
Sbjct: 154 KHSFNIVISAGIVLWDFFAKLRL 176
>gi|297190579|ref|ZP_06907977.1| rRNA methylase SpoU [Streptomyces pristinaespiralis ATCC 25486]
gi|197717892|gb|EDY61800.1| rRNA methylase SpoU [Streptomyces pristinaespiralis ATCC 25486]
Length = 190
Score = 67.8 bits (164), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL LARTC+ A I+V WVP N+++
Sbjct: 58 NLGTLARTCDAVGAC-----------------ITVPRFPWVPEALARGNTLRKPVCTHRT 100
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPLDQYMFPKK--TVLVLGREKEGIPVDIIHMLD 1824
+L R++ G ++G+E ++ L + P + TV+VLG E+ GIP + + +LD
Sbjct: 101 GDPLGWLARQRERGARIVGVELADEAVRLAD-LAPARSPTVMVLGHEQHGIPPEALDLLD 159
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWE 1850
C+EIP +G SLNV V+G++AL++
Sbjct: 160 ECVEIPMVGTGSSLNVAVAGSLALYK 185
>gi|255013118|ref|ZP_05285244.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_7]
gi|298373994|ref|ZP_06983952.1| RNA methylase, SpoU family [Bacteroides sp. 3_1_19]
gi|301311793|ref|ZP_07217718.1| RNA methylase, SpoU family [Bacteroides sp. 20_3]
gi|410102580|ref|ZP_11297506.1| hypothetical protein HMPREF0999_01278 [Parabacteroides sp. D25]
gi|423337408|ref|ZP_17315152.1| hypothetical protein HMPREF1059_01077 [Parabacteroides distasonis
CL09T03C24]
gi|298268362|gb|EFI10017.1| RNA methylase, SpoU family [Bacteroides sp. 3_1_19]
gi|300830353|gb|EFK60998.1| RNA methylase, SpoU family [Bacteroides sp. 20_3]
gi|409237237|gb|EKN30037.1| hypothetical protein HMPREF1059_01077 [Parabacteroides distasonis
CL09T03C24]
gi|409238652|gb|EKN31443.1| hypothetical protein HMPREF0999_01278 [Parabacteroides sp. D25]
Length = 176
Score = 67.8 bits (164), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+V + L E + S++ ++V + + N+ + RT + F+ + + +
Sbjct: 5 KVTELNRLTPEAFKESKKIPLIVVLDHVRSLNNVGSVFRTSDAFRVEAIYLCGITACPPN 64
Query: 1746 KQFQLISVTAEK---WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF-- 1800
+ ++ AE+ W + P +++ + EG++V +EQ S+ LD
Sbjct: 65 AEIHKTALGAEETVDWEYFKDTP-----EAVDKLRQEGYTVCAVEQAEGSVMLDNLQLDK 119
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
KK +V+G E +G+ +++ D CIEIPQ G SLNV V+ I +W++ +Q
Sbjct: 120 TKKYAIVMGNEVKGVQQNVVDNCDICIEIPQYGTKHSLNVSVTTGIVIWDFFKQ 173
>gi|336173167|ref|YP_004580305.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334727739|gb|AEH01877.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 220
Score = 67.8 bits (164), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKAS 1733
K+LLE E L D LQ +E + F + + ++ N + + R+C+VF
Sbjct: 4 KKLLE-HLETYLTDHRLQRFYKVLEQ---RTKHFTVATEDVYQLHNTSAVIRSCDVF--- 56
Query: 1734 GLAIADANILHDKQFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQT 1789
I + NI+ + + I ++ A+KWV + +++K ++ K +G+ V+
Sbjct: 57 --GIQEVNIVEEVNAKRIDREIAMGAQKWVDLNRY--HTVKDAIQDVKQKGYQVVATTPH 112
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
AN L + KK+ GRE EG+ +++ D ++IP +G SLN+ VS AI L
Sbjct: 113 ANDCNLRDFDVTKKSCFFFGRETEGLSQEVLDEADVFLKIPMVGFTESLNISVSAAIILQ 172
Query: 1850 EYTRQ 1854
T +
Sbjct: 173 HVTTE 177
>gi|138897021|ref|YP_001127474.1| rRNA methylase SpoU [Geobacillus thermodenitrificans NG80-2]
gi|196249846|ref|ZP_03148542.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. G11MC16]
gi|134268534|gb|ABO68729.1| rRNA methylase SpoU [Geobacillus thermodenitrificans NG80-2]
gi|196210722|gb|EDY05485.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. G11MC16]
Length = 245
Score = 67.8 bits (164), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 1670 REAYKQLLEIEKEDELFDQ-------VLQARSLAMETIRASRQQFVLV-ASLIDRIPNLA 1721
REA L ++++E L +Q +L R M + R +++ V +D N A
Sbjct: 9 REAKAFLEQLQQEGLLTEQTRLIWEMILPKRLKRMYDVLNERTRYITVLMEAVDDPHNQA 68
Query: 1722 GLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
+ RT E F I D +++ + +L++ A++W+ + P IK + K
Sbjct: 69 AVLRTAEAF-----GIQDVHVVTGRAPFSPNRLVTRYADQWLTLHRQP--DIKTAISDLK 121
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
+G+ V +IPL + K TVL+ G E G+ + + + D IP G V+S
Sbjct: 122 QQGYQVYASYLGEGTIPLSEVNVSKPTVLLFGNEHSGVSEEALRLADGTFVIPMYGFVQS 181
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
N+ V+ A+ L++ T + R
Sbjct: 182 FNISVAAALTLYDVTERAR 200
>gi|406672724|ref|ZP_11079949.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
gi|423315799|ref|ZP_17293704.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405585515|gb|EKB59339.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405587268|gb|EKB60996.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
Length = 179
Score = 67.8 bits (164), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP----KKTVLVLGREKEGIPVDIIHML 1823
+I L K EG+++ G+EQT NSI ++Q FP KK LV G E +G+ + ++
Sbjct: 87 TISETLNTLKSEGYAITGIEQTNNSIAMNQ--FPIDTKKKYALVFGNEVDGLSDEALNSY 144
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEY 1851
D+ IEIPQLG SLNV V G I ++ +
Sbjct: 145 DSFIEIPQLGTKHSLNVSVCGGIVMYHF 172
>gi|330997272|ref|ZP_08321125.1| RNA methyltransferase, TrmH family [Paraprevotella xylaniphila YIT
11841]
gi|329571067|gb|EGG52774.1| RNA methyltransferase, TrmH family [Paraprevotella xylaniphila YIT
11841]
Length = 180
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K EG+ V +EQ S+ L + KK ++LG E +G+ +++ D CIEIP
Sbjct: 94 VEHLKAEGYEVWAVEQVEGSVMLQDFRPDKAKKYAIILGNEVKGVQQEVVDQCDGCIEIP 153
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Q G SLNV V+ I +WE+ R+ +
Sbjct: 154 QFGTKHSLNVSVTAGILVWEFARKMKL 180
>gi|124007000|ref|ZP_01691829.1| tRNA/rRNA methyltransferase [Microscilla marina ATCC 23134]
gi|123987453|gb|EAY27173.1| tRNA/rRNA methyltransferase [Microscilla marina ATCC 23134]
Length = 176
Score = 67.4 bits (163), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG++++ +EQ S+ L+++ F KK V G E G+ +++ D CIEIPQ G
Sbjct: 94 KQEGWTIVAIEQVDKSVSLEKFNFEADKKYAFVFGNEVFGVDEEVVKQADVCIEIPQFGT 153
Query: 1835 VRSLNVHVSGAIALWEY-TRQQR 1856
SLN+ VS + +W+Y ++ QR
Sbjct: 154 KHSLNISVSMGVVIWDYFSKMQR 176
>gi|225850140|ref|YP_002730374.1| RNA methyltransferase, TrmH family, group 3 [Persephonella marina
EX-H1]
gi|225646622|gb|ACO04808.1| RNA methyltransferase, TrmH family, group 3 [Persephonella marina
EX-H1]
Length = 242
Score = 67.4 bits (163), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVT-AEKWVPIVEVPVNSIKHFLERKK 1777
N+ + RT EV +SG+ + + + + T A ++PI +V +I+ F+++ K
Sbjct: 106 NVGNIIRTAEVLGSSGIIVPRERSSPINEVVVKASTGAVFYLPIAKV--GNIRQFIDKFK 163
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G V+ +E+ P+ + FP ++VLG E +G+ ++ D + IP G + S
Sbjct: 164 KRGGWVISVEKGGK--PIHKVSFPFPALIVLGSEGKGVSKTVLENSDMIVSIPMFGKITS 221
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LNV + AI+LWE ++Q+
Sbjct: 222 LNVSAAAAISLWEVSKQK 239
>gi|86142740|ref|ZP_01061179.1| spoU protein [Leeuwenhoekiella blandensis MED217]
gi|85830772|gb|EAQ49230.1| spoU protein [Leeuwenhoekiella blandensis MED217]
Length = 217
Score = 67.4 bits (163), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 1681 KEDELFDQVLQARSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIAD 1739
+ +LF QVL R+ +F+ VA + + N + + R+C+ F + + +
Sbjct: 16 RRQDLFKQVLDERT-----------RFLTVAIEDVGHLHNTSAVMRSCDAFGVQDIHVIE 64
Query: 1740 ANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
L K+ + I++ A+KW + +S K+ L + K EG+ ++ + L+ +
Sbjct: 65 E--LKGKRIDREIAMGAQKWTSVKRY--DSTKNALAKLKSEGYQIVATTPHHTAHKLEDF 120
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K T L G EK+G+ +I D I IP G +SLN+ V AI L E T++ R
Sbjct: 121 KLDKPTALFFGSEKDGLTETVIEAADEYIYIPTFGFTQSLNISVCAAILLQELTQRLR 178
>gi|399028131|ref|ZP_10729434.1| rRNA methylase [Flavobacterium sp. CF136]
gi|398074208|gb|EJL65359.1| rRNA methylase [Flavobacterium sp. CF136]
Length = 221
Score = 67.4 bits (163), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIV 1762
+ F + + ++ N + + R+CEVF L + + DK+ I++ A+KWV I
Sbjct: 31 KHFTIAVEDVFQMHNTSAVMRSCEVFGIQELNVIEQRYGKRIDKE---IAMGAQKWVDIN 87
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
+ +SI + L K++G+ ++ N L+ + K + L G E++G+ +I+
Sbjct: 88 QF--DSITNCLSTLKNQGYQIIATTPHENDCLLEDFDITKPSALFFGTERDGLSQEILDK 145
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++IP +G SLN+ VS AI + T + R
Sbjct: 146 ADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLR 179
>gi|332671651|ref|YP_004454659.1| tRNA/rRNA methyltransferase SpoU [Cellulomonas fimi ATCC 484]
gi|332340689|gb|AEE47272.1| tRNA/rRNA methyltransferase (SpoU) [Cellulomonas fimi ATCC 484]
Length = 173
Score = 67.4 bits (163), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 30/144 (20%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A ++V WVP N+++H
Sbjct: 41 NLGTLLRTCDAVGAC-----------------LAVPRLPWVPEALERGNTLRHPACVHWT 83
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+LER++ G +V+G+E S+ L D ++TV+VLG E+ GIP + + +LD
Sbjct: 84 GNRVRWLERQRDRGSTVVGVELAEESVRLGDLPAARRRTVVVLGHEQTGIPPEALDLLDV 143
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALW 1849
+EIP +G SLNV V+G++ L+
Sbjct: 144 TVEIPMVGTGASLNVAVAGSLVLY 167
>gi|313887355|ref|ZP_07821046.1| RNA methyltransferase, TrmH family [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923274|gb|EFR34092.1| RNA methyltransferase, TrmH family [Porphyromonas asaccharolytica
PR426713P-I]
Length = 184
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLI---SVTAEKWVPIVEVPVNSIKHFLER 1775
N+ + RT + F+ L + I LI ++ AE+ VP + +S FLER
Sbjct: 39 NVGSIFRTADAFRLEELLLV--GITGCPPHPLIHKTAIGAEEAVPWRHL--DSAIEFLER 94
Query: 1776 KKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
+ G ++L LEQT SIPL + + VL++G E GI ++I D C+EIPQ G
Sbjct: 95 CRAAGRTILALEQTHQSIPLGNQPALDDRGAVLIVGNEVHGISDEVIQYADDCLEIPQHG 154
Query: 1834 VVRSLNVHVSGAIALWE 1850
SLNV V+ IA+++
Sbjct: 155 TKHSLNVSVATGIAIYD 171
>gi|383450072|ref|YP_005356793.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380501694|emb|CCG52736.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 223
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 84/162 (51%), Gaps = 7/162 (4%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVT 1754
++ ++ + + + ++ N + + R+CEVF L + + DK+ I++
Sbjct: 27 LKVLKNRTKHLTIAMEDVYQLHNTSAVMRSCEVFGVQELHVIEQRFGKRIDKE---IALG 83
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
AEKWV I ++I++ ++ K++G+ ++ +S LD + +K+ + G EK G
Sbjct: 84 AEKWVDINRF--STIQNCIDDLKNKGYQIIATTPHNDSCLLDAFDITQKSAIFFGTEKLG 141
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ +++ D ++IP +G SLN+ VS AI + + T + R
Sbjct: 142 LSEEVMQQADGFLKIPMVGFTESLNISVSAAIVIQDLTNRIR 183
>gi|379707938|ref|YP_005263143.1| hypothetical protein NOCYR_1716 [Nocardia cyriacigeorgica GUH-2]
gi|374845437|emb|CCF62503.1| protein of unknown function; putative RNA METHYLTRANSFERASE domain
[Nocardia cyriacigeorgica GUH-2]
Length = 172
Score = 67.0 bits (162), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 31/146 (21%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL + RTC+ A ++V WVP N+++H
Sbjct: 39 NLGTMLRTCDAVGAC-----------------LAVPRRPWVPDALAQGNTLRHRSCVHWI 81
Query: 1772 ------FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
+L+R++ G +V+G+E T SI L D + ++TV+VLG E +GIP + + +D
Sbjct: 82 DGRVDRWLDRQRAGGSAVIGVELTDESIRLADLPVARRRTVVVLGHESDGIPPEGLERID 141
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWE 1850
+EIP +G SLNV V+G++ L++
Sbjct: 142 LAVEIPMVGTGHSLNVAVAGSLVLYK 167
>gi|148241671|ref|YP_001226828.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
gi|147849981|emb|CAK27475.1| tRNA (Guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
Length = 229
Score = 67.0 bits (162), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 1714 IDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIK 1770
+++ NL+ + RTC+ VF+A +++ + F + ++KWVPI + +S+K
Sbjct: 29 VEKPHNLSAILRTCDATGVFEAHAVSLKG----RPRTFNSTAQGSQKWVPIRDH--DSVK 82
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+ +GF + G N++ F K + VLG EK G+ + +D + IP
Sbjct: 83 DAFAELRAKGFRIYGTMLGVNAVDYRSCDFTKPSAFVLGAEKWGLTAEAGDAVDQPVFIP 142
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ A L+E RQ++
Sbjct: 143 MSGMVQSLNVSVAAATLLFEAVRQRQ 168
>gi|335041477|ref|ZP_08534514.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
gi|334178635|gb|EGL81363.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
Length = 256
Score = 67.0 bits (162), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 8/188 (4%)
Query: 1674 KQLLE---IEKEDELFDQVLQARSLA--METIRASRQQFVLVASLIDRIPNLAGLARTCE 1728
KQL+ + ++D+L + L+ L E ++ + ++ +D N A + R+ +
Sbjct: 11 KQLISEGFLTEKDDLVWKTLRPERLKRMYEVLKQRTRHIAVLLEAVDDGHNQAAVLRSAD 70
Query: 1729 VFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
F ++I + ++ +A KW+ I P +I+ ++ + G+ VL
Sbjct: 71 AFGVQNVSIVVGRAPFSPN-RKVTQSAHKWLTIERQP--TIETAIKTAQERGYQVLASHL 127
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
A+++PL + + TV + G E +G+ + + M D IP G V+SLN+ V+ AI L
Sbjct: 128 GADAVPLAELDLSQPTVFLFGNEHDGVTEEALEMADGNFIIPMYGFVQSLNISVAAAITL 187
Query: 1849 WEYTRQQR 1856
+ T++ R
Sbjct: 188 HQATQRAR 195
>gi|374316530|ref|YP_005062958.1| rRNA methylase, putative, group 3 [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352174|gb|AEV29948.1| rRNA methylase, putative, group 3 [Sphaerochaeta pleomorpha str.
Grapes]
Length = 253
Score = 67.0 bits (162), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVP 1765
VLV I NL + R+C+ F S + I + + ++ +S A ++VP+
Sbjct: 102 VVLVLDEITDPQNLGAILRSCDQFSVSLVIIPERRSVQVNETVVKVSSGAAQYVPVS--I 159
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
V ++ LE K GF V G + + + +FPKKTVLV+G E +G+ + D
Sbjct: 160 VTNVNRELEYLKANGFWVYGADMEGKA--SHKTVFPKKTVLVMGNEGKGLSRLTQQLCDM 217
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ IP G + SLNV V+ I L+E RQQ
Sbjct: 218 LVSIPTSGHIDSLNVSVATGILLYEIRRQQ 247
>gi|423290937|ref|ZP_17269786.1| hypothetical protein HMPREF1069_04829 [Bacteroides ovatus CL02T12C04]
gi|392664802|gb|EIY58339.1| hypothetical protein HMPREF1069_04829 [Bacteroides ovatus CL02T12C04]
Length = 175
Score = 67.0 bits (162), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ KK +V+G E +G+ ++I+
Sbjct: 83 VNNAVDAVDNLKNEGYIVYSVEQAEGSIMLDELQLDKTKKYAIVMGNEVKGVQQEVINHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|325972623|ref|YP_004248814.1| TrmH family RNA methyltransferase [Sphaerochaeta globus str. Buddy]
gi|324027861|gb|ADY14620.1| RNA methyltransferase, TrmH family, group 3 [Sphaerochaeta globus
str. Buddy]
Length = 251
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 1699 TIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI-----ADANILHDKQFQLISV 1753
T++ VLV I NL + R+ + F S + I A AN K +S
Sbjct: 95 TLKDDDSALVLVLDEITDPQNLGAILRSADQFSVSLVIIPERRSAQANTTVVK----VSS 150
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A ++VP+ V ++ +E K +GF V G + ++ + +FPK+TVLV+G E +
Sbjct: 151 GAAQYVPLATV--TNMNREIEYLKSQGFWVYGASMSGQAVY--KTVFPKRTVLVMGNEGK 206
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
GI + D + IP G + SLNV V+ I L+E RQQ
Sbjct: 207 GIGQLTQKLCDHMVTIPMSGHIDSLNVSVATGILLYEVRRQQ 248
>gi|325299402|ref|YP_004259319.1| tRNA/rRNA methyltransferase SpoU [Bacteroides salanitronis DSM 18170]
gi|324318955|gb|ADY36846.1| tRNA/rRNA methyltransferase (SpoU) [Bacteroides salanitronis DSM
18170]
Length = 178
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+++ +EQ SI LD+ + KK +VLG E +G+ +++++ D CIEIPQ G S
Sbjct: 100 GYTLFAIEQCEGSILLDKLVLEPDKKYAVVLGNEVKGVKQEVVNLCDGCIEIPQFGTKHS 159
Query: 1838 LNVHVSGAIALWEY 1851
LNV V+ I +WE+
Sbjct: 160 LNVSVTAGIVIWEF 173
>gi|374597318|ref|ZP_09670322.1| tRNA/rRNA methyltransferase (SpoU) [Gillisia limnaea DSM 15749]
gi|373871957|gb|EHQ03955.1| tRNA/rRNA methyltransferase (SpoU) [Gillisia limnaea DSM 15749]
Length = 219
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 1681 KEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADA 1740
K LF++VL +R+ F + + ++ N + + R+C+VF + + +
Sbjct: 18 KRKALFEKVLNSRT----------NHFTVATEDVYQLHNTSAVMRSCDVFGIQNIHVIEE 67
Query: 1741 NILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
L D++ I++ A+KWV + S K +E + +G+ ++ NS L +
Sbjct: 68 RNLKRIDRE---IAMGAQKWVSLNRHK--SSKDCVEALREKGYQIVATTPYGNSKNLSDF 122
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
K + + G EK G+ +++ D + IP +G SLN+ VS AI L T++ R
Sbjct: 123 DICKPSAIFFGTEKHGLSQEVMENADTFLRIPMVGFTESLNISVSAAIILQHLTQELRM 181
>gi|338210194|ref|YP_004654241.1| tRNA/rRNA methyltransferase SpoU [Runella slithyformis DSM 19594]
gi|336304007|gb|AEI47109.1| tRNA/rRNA methyltransferase (SpoU) [Runella slithyformis DSM 19594]
Length = 180
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A + FV V I + N+ + RT + F+A + + + + I+ TA
Sbjct: 23 APKHSFVFVLDDIRSLNNVGSVFRTSDAFRAEKIFLC--GLTGTPPHRDITKTALGADES 80
Query: 1762 VE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVD 1818
VE + L R K EG++++ LEQ S L + + K VLG E G+ +
Sbjct: 81 VEWEKCADVLELLARLKTEGYTIVALEQAEGSTQLQDFAPDQNQKYAFVLGNEVFGVNEE 140
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
++ D C+EIPQ G SLNV VS I W+Y +
Sbjct: 141 VVSQSDICLEIPQFGTKHSLNVSVSAGIVAWDYVSK 176
>gi|383115654|ref|ZP_09936409.1| hypothetical protein BSGG_2479 [Bacteroides sp. D2]
gi|423293778|ref|ZP_17271905.1| hypothetical protein HMPREF1070_00570 [Bacteroides ovatus CL03T12C18]
gi|313694944|gb|EFS31779.1| hypothetical protein BSGG_2479 [Bacteroides sp. D2]
gi|392677736|gb|EIY71152.1| hypothetical protein HMPREF1070_00570 [Bacteroides ovatus CL03T12C18]
Length = 175
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 83 VNNAVDVVDNLKNEGYIVYSVEQAEGSIMLDELQLDKTKKYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|404422061|ref|ZP_11003762.1| hypothetical protein MFORT_16544 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658358|gb|EJZ13099.1| hypothetical protein MFORT_16544 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 178
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 35/148 (23%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A ++V WVP N+++H
Sbjct: 45 NLGTLLRTCDAVGAC-----------------LAVPRLPWVPEALRKGNTLRHRSCVHWI 87
Query: 1772 ------FLERKKHEGFSVLGLEQTANSIPLDQYMFP---KKTVLVLGREKEGIPVDIIHM 1822
+LE+++ ++G+E T SI L + P ++TV+VLG E GIP D + +
Sbjct: 88 YGDVIRWLEKQRERSAHIVGVELTDESIRLAE--LPAARRRTVVVLGNEGSGIPSDAMEL 145
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWE 1850
LD +EIP LG SLNV V+G++ L++
Sbjct: 146 LDLAVEIPMLGSGHSLNVAVAGSLVLYK 173
>gi|256420945|ref|YP_003121598.1| tRNA/rRNA methyltransferase SpoU [Chitinophaga pinensis DSM 2588]
gi|256035853|gb|ACU59397.1| tRNA/rRNA methyltransferase (SpoU) [Chitinophaga pinensis DSM 2588]
Length = 175
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ G++V+ +EQ NSI LDQ++ K L+ G E G+ +++ M++ CIEIPQ G+
Sbjct: 89 QEAGYTVMAVEQAVNSIMLDQFIPASDKPLALIFGNEVSGVDAEVMKMVEGCIEIPQSGM 148
Query: 1835 VRSLNVHVSGAIALWE 1850
SLN+ VS I +W+
Sbjct: 149 KHSLNISVSTGIVVWD 164
>gi|300774602|ref|ZP_07084465.1| SpoU family RNA methylase [Chryseobacterium gleum ATCC 35910]
gi|300506417|gb|EFK37552.1| SpoU family RNA methylase [Chryseobacterium gleum ATCC 35910]
Length = 176
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K G+ ++G+EQT +S + + KK L+LG E EGI +++ +D +EIPQLG
Sbjct: 95 KSNGYEIIGIEQTTDSQMITDFTIDKSKKYALILGNEVEGISDEVLPNIDVFLEIPQLGT 154
Query: 1835 VRSLNVHVSGAIALWEYTR 1853
SLNV V G I +WE+ +
Sbjct: 155 KHSLNVSVCGGIVMWEFAK 173
>gi|377579545|ref|ZP_09808512.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia hermannii NBRC
105704]
gi|377539203|dbj|GAB53677.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia hermannii NBRC
105704]
Length = 349
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A + VL + NL G+ R+C F GL + DA++L TAE
Sbjct: 197 AGEEDCVLALEDVGNPHNLGGIMRSCAHFGVKGLLVEDASLLESGA---AVRTAEGGAEH 253
Query: 1762 VEVPVNSIKHF---LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
V+ S HF LER + G++++ + L Q PKK VLVLG+E++G+
Sbjct: 254 VQAI--SGDHFSDGLERFRQAGYAIV-TTSSHKGTALYQSTLPKKMVLVLGQERDGVSDA 310
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D I IP G V SLNV V+ + L E+ RQ +
Sbjct: 311 TFDNADMRIAIPGSGNVESLNVSVATGVLLAEWWRQNK 348
>gi|228470939|ref|ZP_04055784.1| SpoU rRNA methylase family protein [Porphyromonas uenonis 60-3]
gi|228307336|gb|EEK16350.1| SpoU rRNA methylase family protein [Porphyromonas uenonis 60-3]
Length = 186
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 1689 VLQARSLAMETIR-ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN------ 1741
+L+ + L E AS+ ++ + + N+ + RT + F+ L +
Sbjct: 8 ILEMQRLTTEEYHTASKVPLTILLDNVRSMHNVGSIFRTADAFRIEELLLVGITGCPPHP 67
Query: 1742 ILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY--M 1799
+LH ++ AE+ VP + +S LE+ + EG ++L LEQT SI L +
Sbjct: 68 LLHKT-----AIGAEEAVPWRHL--DSAIEALEQYRQEGRTILALEQTHQSITLGSQPAL 120
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ VL++G E G+ ++I D C+EIPQ G SLNV V+ IA+++
Sbjct: 121 DDRGAVLIVGNEVHGVSDEVIQYADYCLEIPQYGTKHSLNVSVATGIAIYD 171
>gi|372208948|ref|ZP_09496750.1| tRNA/rRNA methyltransferase SpoU [Flavobacteriaceae bacterium S85]
Length = 176
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV- 1759
A + ++V I + N+ + RT + F + + +K+ ++ A V
Sbjct: 20 AKKTPLIVVLDNIRSLNNIGSVFRTSDAFAIEKIYLCGITATPPNKEIHKTALGATDSVV 79
Query: 1760 -PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIP 1816
VE V+ +K E+ G VL +EQ NS+ L ++ +K +++G E +G+
Sbjct: 80 WEYVEDTVSLVKKLQEK----GVKVLAIEQAENSVKLQNFIIEENQKYAVIMGNEVKGVQ 135
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
++I++ D C+EIPQ G SLN+ V+ + LW+ ++ RF
Sbjct: 136 QEVINVSDYCVEIPQYGTKHSLNISVTTGVVLWDLFKKFRF 176
>gi|365143272|ref|ZP_09348192.1| hypothetical protein HMPREF1024_04223 [Klebsiella sp. 4_1_44FAA]
gi|363649614|gb|EHL88721.1| hypothetical protein HMPREF1024_04223 [Klebsiella sp. 4_1_44FAA]
Length = 361
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL 1750
Q S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 198 QGTSVAQWVAKAGEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGA 254
Query: 1751 ISVTAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
TAE VE + +S L++ + G++++ + N PL + PKK VL LG
Sbjct: 255 AIRTAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLALG 313
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+E++G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 314 QERDGLSDAAISSADLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|288800355|ref|ZP_06405813.1| RNA methylase, SpoU family [Prevotella sp. oral taxon 299 str. F0039]
gi|288332568|gb|EFC71048.1| RNA methylase, SpoU family [Prevotella sp. oral taxon 299 str. F0039]
Length = 176
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 24/179 (13%)
Query: 1689 VLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DK 1746
VL+ L +E +A+R+ V+V + + N+ + R+C+ F+ + +
Sbjct: 6 VLEMNRLTVEEFKAARKLPLVVVLDNVRSLHNVGSVFRSCDAFRIEAVYLCGITATPPSA 65
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHF------LERKKHEGFSVLGLEQTANS-----IPL 1795
+ ++ AE V S K++ +E K + + V +EQ S I L
Sbjct: 66 EIHKTALGAEDSV--------SWKYYKSTLDAVEELKQQDYFVYSIEQVEGSQNMAKINL 117
Query: 1796 DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D K+ +VLG E +G+ ++++ D+C+EIPQLG SLNV V+ I +WE+ +Q
Sbjct: 118 DH---SKRYAVVLGNEVKGVQQEVVNASDSCLEIPQLGTKHSLNVSVTAGIVVWEFAKQ 173
>gi|374374171|ref|ZP_09631830.1| tRNA/rRNA methyltransferase (SpoU) [Niabella soli DSM 19437]
gi|373233613|gb|EHP53407.1| tRNA/rRNA methyltransferase (SpoU) [Niabella soli DSM 19437]
Length = 175
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 7/166 (4%)
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA--DANILHDKQFQ 1749
R E + + V+V I N+ + RT + F G+ + A H K+ +
Sbjct: 5 GRKSVAEFRESEKMPIVVVLENIRSAYNVGSVFRTSDAFLVEGIYVTGYSAKPPH-KEIK 63
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLV 1807
++ AE+ V P S K ++ + ++V +EQ ANS L++ + K LV
Sbjct: 64 KTALGAEESVTWKHFP--SAKEAIDELRQLEYAVFAIEQVANSKKLNELNWDGRSKIALV 121
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
G E G+ I + D CIEIPQLG+ SLN+ + + LWE R
Sbjct: 122 FGNEVTGVEQSTIALCDNCIEIPQLGMKHSLNIATAAGVVLWELVR 167
>gi|378549397|ref|ZP_09824613.1| hypothetical protein CCH26_04892 [Citricoccus sp. CH26A]
Length = 237
Score = 66.2 bits (160), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ + RT F A+G+ I I + + ++ ++++ + P +++ F+ +
Sbjct: 103 NIGTVVRTANAFNAAGVHI----IGRRRWNRRGAMVTDRYLHVHHHP--TVEDFIGWARS 156
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
E +VLG++ +S+PL+ Y P++ VLV G+E G+ ++ +A + I Q G RS+
Sbjct: 157 EELTVLGIDIFPDSVPLETYRLPERCVLVFGQEGPGLSEEVHRAAEATLSIAQFGSTRSI 216
Query: 1839 NVHVSGAIALWEYTRQQRF 1857
N V+ IA+ + R+ F
Sbjct: 217 NAGVAAGIAMHAWVRRHVF 235
>gi|294777466|ref|ZP_06742917.1| RNA methyltransferase, TrmH family [Bacteroides vulgatus PC510]
gi|423313140|ref|ZP_17291076.1| hypothetical protein HMPREF1058_01688 [Bacteroides vulgatus
CL09T03C04]
gi|294448534|gb|EFG17083.1| RNA methyltransferase, TrmH family [Bacteroides vulgatus PC510]
gi|392686354|gb|EIY79660.1| hypothetical protein HMPREF1058_01688 [Bacteroides vulgatus
CL09T03C04]
Length = 178
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+GF+VL +EQ S LD+ KK +V+G E +G+ ++++ D C+EIPQ G
Sbjct: 96 QGFTVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNACDGCVEIPQYGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I LWE+ +
Sbjct: 156 SLNVSVTTGIILWEFANK 173
>gi|150003712|ref|YP_001298456.1| tRNA/rRNA methyltransferase [Bacteroides vulgatus ATCC 8482]
gi|319640065|ref|ZP_07994792.1| tRNA/rRNA methyltransferase [Bacteroides sp. 3_1_40A]
gi|345517080|ref|ZP_08796558.1| tRNA/rRNA methyltransferase [Bacteroides sp. 4_3_47FAA]
gi|149932136|gb|ABR38834.1| tRNA/rRNA methyltransferase [Bacteroides vulgatus ATCC 8482]
gi|254833851|gb|EET14160.1| tRNA/rRNA methyltransferase [Bacteroides sp. 4_3_47FAA]
gi|317388343|gb|EFV69195.1| tRNA/rRNA methyltransferase [Bacteroides sp. 3_1_40A]
Length = 178
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+GF+VL +EQ S LD+ KK +V+G E +G+ ++++ D C+EIPQ G
Sbjct: 96 QGFTVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNACDGCVEIPQYGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I LWE+ +
Sbjct: 156 SLNVSVTTGIILWEFANK 173
>gi|86134820|ref|ZP_01053402.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
gi|85821683|gb|EAQ42830.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
Length = 177
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEI 1829
+++ K EG VL +EQ NS LD + +K +V+G E +G+ ++I+ D CIEI
Sbjct: 89 LVKKLKKEGIKVLSIEQAENSTMLDTFTPKLAEKYAIVMGNEVKGVQQEVINASDFCIEI 148
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQR 1856
PQLG SLN+ V+ + +W+ + R
Sbjct: 149 PQLGTKHSLNISVTTGVVIWDLFTKIR 175
>gi|313206520|ref|YP_004045697.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485822|ref|YP_005394734.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321489|ref|YP_006017651.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|416109745|ref|ZP_11591625.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|442314279|ref|YP_007355582.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
gi|312445836|gb|ADQ82191.1| tRNA/rRNA methyltransferase (SpoU) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023539|gb|EFT36543.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|325336032|gb|ADZ12306.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|380460507|gb|AFD56191.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483202|gb|AGC39888.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
Length = 176
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ S+ V+V I + N+ L RT + F + + I + I A
Sbjct: 20 KTSKTPLVVVLDNIRSMHNVGALFRTADAFLIEKIVLC--GITPQPPHREIHKAALGATE 77
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPV 1817
V+ V I ++ K +G++++G+EQT +SI L + +K LVLG E EG+
Sbjct: 78 SVDWVYQKDISEAIKELKTQGYNIIGVEQTTDSISLSDFEINPNQKYALVLGNEVEGLSD 137
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
+ + + D IEIPQLG SLNV V G I +W +
Sbjct: 138 EALPLYDNFIEIPQLGTKHSLNVSVCGGIVIWSF 171
>gi|346226674|ref|ZP_08847816.1| tRNA/rRNA methyltransferase [Anaerophaga thermohalophila DSM 12881]
Length = 178
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD--ANILHDKQFQ 1749
R E + ++ ++V I + N+ + RT + F+ + + A H K+
Sbjct: 10 GRISVKEFKKVAKTPIIVVLDNIRSLHNVGSIFRTSDAFRIRSVFLCGITATPPH-KEIH 68
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLV 1807
++ AE+ V N +E K EGF ++G+EQT SI L + KK +
Sbjct: 69 KTALGAEESVEWHYF--NKTTDAVEMLKKEGFFLIGIEQTDESISLPAFEPDMTKKYAVF 126
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
G E +G+ +I D C+EIPQ G S NV VS I LWE ++ F
Sbjct: 127 FGNEVKGVDQRVIDECDMCLEIPQFGTKHSFNVSVSAGIVLWELAGKRLF 176
>gi|126663591|ref|ZP_01734588.1| spoU protein [Flavobacteria bacterium BAL38]
gi|126624539|gb|EAZ95230.1| spoU protein [Flavobacteria bacterium BAL38]
Length = 220
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVT 1754
+ ++ + F + + ++ N + + R+CEVF L + + DK+ I++
Sbjct: 25 LRVLKNRTKHFTIAMEDVFQLHNTSAVMRSCEVFGIQELNVVEQKFGKSIDKE---IAMG 81
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
AEKWV I +SI+ + K +G+ ++ +S L ++ + + L G E++G
Sbjct: 82 AEKWVDINRF--SSIQDCITNLKQKGYQIIATTPHNDSCLLHEFDITQPSALFFGTERDG 139
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ +++ D ++IP +G SLN+ VS AI + + T + R
Sbjct: 140 LSEEVMQQADGFLKIPMVGYTESLNISVSAAIIIQDITNRLR 181
>gi|290508236|ref|ZP_06547607.1| TrmH family RNA methyltransferase [Klebsiella sp. 1_1_55]
gi|289777630|gb|EFD85627.1| TrmH family RNA methyltransferase [Klebsiella sp. 1_1_55]
Length = 361
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A+ + VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAAEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 257
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L++ + G++++ + N PL + PKK VLVLG+E+
Sbjct: 258 TAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSSDLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|206577025|ref|YP_002237077.1| methyltransferase [Klebsiella pneumoniae 342]
gi|206566083|gb|ACI07859.1| RNA methyltransferase, TrmH family [Klebsiella pneumoniae 342]
Length = 361
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQLIS 1752
S+A +A+ VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAAEDDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVLESGAAIRTAE 260
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
AE+ PI +S L++ + G++++ + N PL + PKK VLVLG+E+
Sbjct: 261 GGAERVEPITG---DSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSSDLSVAINGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|288934040|ref|YP_003438099.1| tRNA/rRNA methyltransferase SpoU [Klebsiella variicola At-22]
gi|288888769|gb|ADC57087.1| tRNA/rRNA methyltransferase (SpoU) [Klebsiella variicola At-22]
Length = 361
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A+ + VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAAEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 257
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L++ + G++++ + N PL + PKK VLVLG+E+
Sbjct: 258 TAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSSDLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|397659414|ref|YP_006500116.1| tRNA/rRNA methyltransferase yfiF [Klebsiella oxytoca E718]
gi|394347595|gb|AFN33716.1| putative tRNA/rRNA methyltransferase yfiF [Klebsiella oxytoca E718]
Length = 357
Score = 65.9 bits (159), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A + VL + NL + R+C F G+ + DA ++ + AE
Sbjct: 204 KADAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVIVQDAGVMESGAAIRTAEGGAEHVE 263
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +S LER + G++++ + N PL + PKK VLVLG+E +G+
Sbjct: 264 PITG---DSFTDTLERFRKAGYAIVS-TSSHNGTPLFKAELPKKMVLVLGQESDGLSDAA 319
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I D I I G V SLNV V+ + L E+ RQ +
Sbjct: 320 ISSADLNIAIEGTGNVESLNVSVATGVLLAEWWRQNK 356
>gi|332299307|ref|YP_004441228.1| tRNA/rRNA methyltransferase SpoU [Porphyromonas asaccharolytica DSM
20707]
gi|332176370|gb|AEE12060.1| tRNA/rRNA methyltransferase (SpoU) [Porphyromonas asaccharolytica DSM
20707]
Length = 184
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLI---SVTAEKWVPIVEVPVNSIKHFLER 1775
N+ + RT + F+ L + I LI ++ AE+ VP + +S FLE+
Sbjct: 39 NVGSIFRTADAFRLEELLLV--GITGCPPHPLIHKTAIGAEEAVPWRHL--DSAIEFLEQ 94
Query: 1776 KKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
+ G ++L LEQT SIPL + + VL++G E GI ++I D C+EIPQ G
Sbjct: 95 CRAAGRTILALEQTHQSIPLGNQPALDDRGAVLIVGNEVHGISDEVIQYADYCLEIPQYG 154
Query: 1834 VVRSLNVHVSGAIALWE 1850
SLNV V+ IA+++
Sbjct: 155 TKHSLNVSVATGIAIYD 171
>gi|407643391|ref|YP_006807150.1| hypothetical protein O3I_011075 [Nocardia brasiliensis ATCC 700358]
gi|407306275|gb|AFU00176.1| hypothetical protein O3I_011075 [Nocardia brasiliensis ATCC 700358]
Length = 172
Score = 65.9 bits (159), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 25/143 (17%)
Query: 1719 NLAGLARTCEVFKASGL---------AIADANILHDKQ-FQLISVTAEKWVPIVEVPVNS 1768
NL L RTC+ A A+A N L +Q I E+W
Sbjct: 39 NLGTLLRTCDAVGACLAVPRKPWVPDALAHGNTLRKQQCVHWIDGRVERW---------- 88
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
L R++ G +++G+E T SI L D ++TV+VLG E GIP + + +LD +
Sbjct: 89 ----LARQRAGGSAIVGVELTDESIRLADLPTARRRTVIVLGHESTGIPPEGLELLDVAV 144
Query: 1828 EIPQLGVVRSLNVHVSGAIALWE 1850
EIP +G SLNV V+G++ L++
Sbjct: 145 EIPMIGTGHSLNVAVAGSLVLYK 167
>gi|336403387|ref|ZP_08584102.1| hypothetical protein HMPREF0127_01415 [Bacteroides sp. 1_1_30]
gi|335945717|gb|EGN07524.1| hypothetical protein HMPREF0127_01415 [Bacteroides sp. 1_1_30]
Length = 175
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ KK +V+G E +G+ ++I+
Sbjct: 83 VNNAVDVVDNLKNEGYIVYSVEQAEGSIMLDELQLDKTKKYAIVMGNEVKGVQQEVINHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWD 169
>gi|420151007|ref|ZP_14658160.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394751190|gb|EJF34989.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 220
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLA 1736
E+ E F QV+ AR+ F + + ++ N + + RTCEVF +A +
Sbjct: 15 EERKERFLQVISART----------NHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 64
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
L K I++ A+KWV + N + +E + +G+ ++ ++ L+
Sbjct: 65 GRFGKRLDAK----IAMGAQKWVDVFRY--NDTQSCIEALRAQGYQIVATTPHKDAYFLN 118
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ KK+V G EKEG+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 119 DFDISKKSVFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|33860979|ref|NP_892540.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639711|emb|CAE18881.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 223
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R VLV + +++ NL+ + RTC+ VF+A+ ++ D K F + ++KWV
Sbjct: 20 RNLTVLVEA-VNKPHNLSAILRTCDAAGVFEANFISEKD----KVKTFNSTAQGSQKWVK 74
Query: 1761 IV--EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
+ E ++++ K +GF + G S + + + T VLG EK G+
Sbjct: 75 LNNHETTISAVSEL----KKKGFKLYGTTLNERSTDYRNFDYSENTCFVLGAEKWGLSDQ 130
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+I +D I IP G+V+SLNV V+ +I L+E RQ++
Sbjct: 131 LISKVDESIFIPMSGMVQSLNVSVATSILLFEAIRQRK 168
>gi|300718026|ref|YP_003742829.1| tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
gi|299063862|emb|CAX60982.1| tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
Length = 345
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A + V+ I NL G+ R+C F A GL + DA++L + TAE
Sbjct: 194 AGEKDCVVALEQIGNPHNLGGMMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAEH 250
Query: 1762 VE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V+ + S L + G++++ + PL Q P KTVLVLG+E++G+
Sbjct: 251 VQAISGESFAEGLNAFRKAGYTIV-TTSSHKGTPLAQAELPAKTVLVLGQERDGLSDSTW 309
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ I L E+ RQ
Sbjct: 310 QQGDLSVSIGGTGNVESLNVSVATGILLAEWWRQ 343
>gi|224023423|ref|ZP_03641789.1| hypothetical protein BACCOPRO_00122 [Bacteroides coprophilus DSM
18228]
gi|224016645|gb|EEF74657.1| hypothetical protein BACCOPRO_00122 [Bacteroides coprophilus DSM
18228]
Length = 223
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+G+ VL +EQ S LD + K K +V G E +G+ ++++ D CIEIPQ G
Sbjct: 139 DGYVVLAIEQCEGSTMLDDLILEKDKKYAIVFGNEVKGVQQEVVNSCDGCIEIPQYGTKH 198
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I LWE R+
Sbjct: 199 SLNVSVTAGIVLWECARR 216
>gi|386821080|ref|ZP_10108296.1| rRNA methylase [Joostella marina DSM 19592]
gi|386426186|gb|EIJ40016.1| rRNA methylase [Joostella marina DSM 19592]
Length = 213
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF-----QLI 1751
+E + F + + ++ N + + R+C+VF + I + KQF + I
Sbjct: 22 IEILAERTNHFTVAIEDVYQLHNTSAVIRSCDVFGIQNVHIVE------KQFGERLDKNI 75
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
++ ++KWV + N++ +E + G+ ++ ++ L + F KK+ L G E
Sbjct: 76 AMGSQKWVDTTKY--NNVSDCVEALRKRGYQIIATSPHVDANMLQDFDFYKKSALFFGTE 133
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K G+ ++I D ++IP G SLN+ VS AI L + T + R
Sbjct: 134 KSGLTPELIKQADGFLKIPMYGFTESLNISVSAAIILQDLTTKLR 178
>gi|237711324|ref|ZP_04541805.1| tRNA/rRNA methyltransferase [Bacteroides sp. 9_1_42FAA]
gi|229454019|gb|EEO59740.1| tRNA/rRNA methyltransferase [Bacteroides sp. 9_1_42FAA]
Length = 178
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+GF+VL +EQ S LD+ KK +V+G E +G+ ++++ D CIEIPQ G
Sbjct: 96 QGFTVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNACDGCIEIPQYGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE+ +
Sbjct: 156 SLNVSVTTGIIVWEFANK 173
>gi|265752733|ref|ZP_06088302.1| tRNA/rRNA methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|263235919|gb|EEZ21414.1| tRNA/rRNA methyltransferase [Bacteroides sp. 3_1_33FAA]
Length = 178
Score = 65.9 bits (159), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+GF+VL +EQ S LD+ KK +V+G E +G+ ++++ D CIEIPQ G
Sbjct: 96 QGFTVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNACDGCIEIPQYGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE+ +
Sbjct: 156 SLNVSVTTGIIVWEFVNK 173
>gi|305667310|ref|YP_003863597.1| spoU protein [Maribacter sp. HTCC2170]
gi|88709357|gb|EAR01590.1| spoU protein [Maribacter sp. HTCC2170]
Length = 216
Score = 65.9 bits (159), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 17/157 (10%)
Query: 1704 RQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL----ISVTAEKW 1758
R ++V VA + ++ N + + R+CEVF + DA+++ ++ + I++ A++W
Sbjct: 29 RTKYVTVAIEDVFQLHNTSAVIRSCEVF-----GLQDAHVIENRFGKRLDKNIAMGAQQW 83
Query: 1759 VPIV--EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
V + E + I H + +G+ ++ +S L+ + KKT L G EKEG+
Sbjct: 84 VDVKRHEDTESCISHL----RDQGYQIIATTPHDDSCLLNDFNLDKKTALFFGTEKEGLS 139
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+++ D ++IP +G SLN+ VS AI L +Y R
Sbjct: 140 EEVMQKADGFLKIPMVGFTESLNISVSAAIIL-QYLR 175
>gi|257458363|ref|ZP_05623510.1| RNA methyltransferase, TrmH family, group 3 [Treponema vincentii ATCC
35580]
gi|257444237|gb|EEV19333.1| RNA methyltransferase, TrmH family, group 3 [Treponema vincentii ATCC
35580]
Length = 274
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 1702 ASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWV 1759
ASR++ FV+V I N + R+ + F + + + D Q IS A WV
Sbjct: 121 ASREKAFVVVLDSITDPHNTGAIIRSADQFSVDAVVLPERRSAGDFQTVSKISAGAAAWV 180
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
P++ ++ +E K GF V G + A PL FP KT+L++G E GI +
Sbjct: 181 PLLYT--ANLVRTVEELKRNGFWVFGAD--AQGEPLPHTKFPDKTLLIMGSEGSGISRLL 236
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D+ IP G + SLNV V+ I ++E RQQ
Sbjct: 237 KTSCDSFTAIPTSGKLDSLNVSVAAGILMYEVRRQQ 272
>gi|283786196|ref|YP_003366061.1| RNA methyltransferase [Citrobacter rodentium ICC168]
gi|282949650|emb|CBG89269.1| putative RNA methyltransferase [Citrobacter rodentium ICC168]
Length = 345
Score = 65.5 bits (158), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVP 1760
A Q VL I NL G+ R+C F G+ + DA +L + AE P
Sbjct: 193 AQAQDCVLALENIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP 252
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I +SI + L+ + G++V+ PL P+K VLVLG+E +G+P
Sbjct: 253 ITG---DSIVNVLDDFRQAGYTVVTTSGDRGK-PLFATALPEKMVLVLGQEADGLPDAAR 308
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V I L E+ RQ +
Sbjct: 309 DPDDLCVKIDGTGNVESLNVSVVTGILLAEWWRQNK 344
>gi|354604716|ref|ZP_09022705.1| hypothetical protein HMPREF9450_01620 [Alistipes indistinctus YIT
12060]
gi|353347295|gb|EHB91571.1| hypothetical protein HMPREF9450_01620 [Alistipes indistinctus YIT
12060]
Length = 177
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
L++ + EG+++L +EQ + L + K K LV G E +G+ + + + D +EIP
Sbjct: 90 LQQLRGEGYTLLAVEQVEKAARLTTFEVEKGKKYALVFGNEVDGVAQEAVDLCDGAVEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G SLNV VSG + LWE+ RQ
Sbjct: 150 QQGTKHSLNVAVSGGVVLWEFFRQ 173
>gi|160884851|ref|ZP_02065854.1| hypothetical protein BACOVA_02841 [Bacteroides ovatus ATCC 8483]
gi|237722042|ref|ZP_04552523.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_2_4]
gi|262405759|ref|ZP_06082309.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_22]
gi|293369284|ref|ZP_06615871.1| RNA methyltransferase, TrmH family [Bacteroides ovatus SD CMC 3f]
gi|294646957|ref|ZP_06724575.1| RNA methyltransferase, TrmH family [Bacteroides ovatus SD CC 2a]
gi|294806791|ref|ZP_06765617.1| RNA methyltransferase, TrmH family [Bacteroides xylanisolvens SD CC
1b]
gi|298483224|ref|ZP_07001403.1| RNA methylase, SpoU family [Bacteroides sp. D22]
gi|345510949|ref|ZP_08790508.1| tRNA/rRNA methyltransferase [Bacteroides sp. D1]
gi|423214514|ref|ZP_17201042.1| hypothetical protein HMPREF1074_02574 [Bacteroides xylanisolvens
CL03T12C04]
gi|156109886|gb|EDO11631.1| RNA methyltransferase, TrmH family [Bacteroides ovatus ATCC 8483]
gi|229442974|gb|EEO48765.1| tRNA/rRNA methyltransferase [Bacteroides sp. D1]
gi|229448911|gb|EEO54702.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_2_4]
gi|262356634|gb|EEZ05724.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_22]
gi|292635614|gb|EFF54119.1| RNA methyltransferase, TrmH family [Bacteroides ovatus SD CMC 3f]
gi|292637679|gb|EFF56079.1| RNA methyltransferase, TrmH family [Bacteroides ovatus SD CC 2a]
gi|294445961|gb|EFG14602.1| RNA methyltransferase, TrmH family [Bacteroides xylanisolvens SD CC
1b]
gi|295085812|emb|CBK67335.1| rRNA methylases [Bacteroides xylanisolvens XB1A]
gi|298270541|gb|EFI12123.1| RNA methylase, SpoU family [Bacteroides sp. D22]
gi|392692929|gb|EIY86165.1| hypothetical protein HMPREF1074_02574 [Bacteroides xylanisolvens
CL03T12C04]
Length = 175
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ KK +V+G E +G+ ++I+
Sbjct: 83 VNNAVDAVDNLKNEGYIVYSVEQAEGSIMLDELQLDKTKKYAIVMGNEVKGVQQEVINHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWD 169
>gi|120435451|ref|YP_861137.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
gi|117577601|emb|CAL66070.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
Length = 217
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 1685 LFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH 1744
LF++VL R+ +VA + ++ N + + R+C+VF + + + I
Sbjct: 21 LFEKVLAQRT----------DHLTVVAQDVYQLHNTSAVVRSCDVFGIQNIHVIEEKIPR 70
Query: 1745 --DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
DK+ I++ A+KWV I S L+ K +G+ ++ +S L+ +
Sbjct: 71 RIDKE---IAMGAQKWVDINRY--TSTTTCLKNLKKKGYRIVATSPHDDSQLLEDFDIST 125
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
L G EK+G+ +++ DA ++IP +G SLN+ VS AI L T + R
Sbjct: 126 PAALFFGTEKDGLSEEVMREADATVKIPMVGFTESLNISVSAAIILQSLTTKLR 179
>gi|421724433|ref|ZP_16163654.1| methyltransferase [Klebsiella oxytoca M5al]
gi|410374771|gb|EKP29431.1| methyltransferase [Klebsiella oxytoca M5al]
Length = 357
Score = 65.5 bits (158), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A + VL + NL + R+C F G+ + DA ++ + AE
Sbjct: 204 KADAEDCVLALEDVGNPHNLGAIMRSCAHFGVRGVVVQDAGVMESGAAIRTAEGGAEHVE 263
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +S LER + G++++ + N PL + PKK VLVLG+E +G+
Sbjct: 264 PITG---DSFIDTLERFRKAGYAIVS-TSSHNGTPLFKAELPKKMVLVLGQESDGLSDAA 319
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I D I I G V SLNV V+ + L E+ RQ +
Sbjct: 320 ISSADLNIAIEGTGNVESLNVSVATGVLLAEWWRQNK 356
>gi|333029529|ref|ZP_08457590.1| tRNA/rRNA methyltransferase (SpoU) [Bacteroides coprosuis DSM 18011]
gi|332740126|gb|EGJ70608.1| tRNA/rRNA methyltransferase (SpoU) [Bacteroides coprosuis DSM 18011]
Length = 176
Score = 65.5 bits (158), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAEKWV--PIVE 1763
F+++ I + N+ + RT + F+ + + ++ + ++ AE+ V +E
Sbjct: 26 FIVILDNIRSMYNVGSVFRTADAFRLEKIYLCGITSVPPHAEIHKTALGAEESVDWEYIE 85
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIH 1821
V H ++R K EG++V +EQ S L++ K K +V+G E +G+ ++I+
Sbjct: 86 DTV----HIVDRLKEEGYTVFSIEQAEGSTMLNELELQKNQKIAIVMGNEVKGVQQEVIN 141
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ CIEIPQ G S+NV V+ I +W+
Sbjct: 142 HSNGCIEIPQYGTKHSMNVSVTTGIVIWD 170
>gi|269126522|ref|YP_003299892.1| tRNA/rRNA methyltransferase SpoU [Thermomonospora curvata DSM 43183]
gi|268311480|gb|ACY97854.1| tRNA/rRNA methyltransferase (SpoU) [Thermomonospora curvata DSM
43183]
Length = 180
Score = 65.5 bits (158), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 32/146 (21%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A ++V WVP N+++H
Sbjct: 48 NLGTLLRTCDAVGAC-----------------LAVPRLPWVPEALRRGNTLRHRACVHWT 90
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHMLD 1824
+L +++ EGF VLG+E ++ L + P +T + VLG E GIP + + +LD
Sbjct: 91 GDPCAWLLKRRAEGFRVLGVEVAEGAVRLAD-LPPARTPTIAVLGHESRGIPDEALDLLD 149
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWE 1850
A +EIP +G SLNV V+G++ L++
Sbjct: 150 AAVEIPMVGTGHSLNVAVAGSLVLYK 175
>gi|255693302|ref|ZP_05416977.1| RNA methylase, SpoU family [Bacteroides finegoldii DSM 17565]
gi|336412950|ref|ZP_08593303.1| hypothetical protein HMPREF1017_00411 [Bacteroides ovatus 3_8_47FAA]
gi|260620877|gb|EEX43748.1| RNA methyltransferase, TrmH family [Bacteroides finegoldii DSM 17565]
gi|335942996|gb|EGN04838.1| hypothetical protein HMPREF1017_00411 [Bacteroides ovatus 3_8_47FAA]
Length = 175
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ K K +V+G E +G+ ++I
Sbjct: 83 VNNAVDAVDNLKNEGYIVYSVEQAEGSIMLDELELDKTRKYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|365850757|ref|ZP_09391219.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
gi|364566958|gb|EHM44636.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
Length = 199
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA +L + TAE
Sbjct: 46 KAGEEDCVLALEDVGNPHNLGAMMRSCAHFGVKGVVVQDAALL---ESGAAIRTAEGGAE 102
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L ++ G++++ + PL Q PKK VLVLG+E++G+
Sbjct: 103 HVEPITGDSFIDTLSEFRNAGYTIVST-SSHKGTPLYQATLPKKMVLVLGQERDGLSEAA 161
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 162 ISSADLSVSIEGTGNVESLNVSVATGVLLGEWWRQNK 198
>gi|347536430|ref|YP_004843855.1| putative tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
gi|345529588|emb|CCB69618.1| Probable tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
Length = 220
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
AY + E E F ++L+ R+ F + + ++ N + + R+CEVF
Sbjct: 8 AYLETFLTENRKENFLKILKNRT----------NHFTVAIEDVYQLHNTSAVMRSCEVFG 57
Query: 1732 ASGLAIADANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQT 1789
L + + D++ I++ A+KWV I + S + +E +++G+ ++
Sbjct: 58 VQELHVIEQRFGKSIDRE---IAMGAQKWVDIYKYE--SQQTCIETLRNKGYQIIATTPH 112
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
N L+ + K + L G E+ G+ +II D ++IP +G SLN+ VS AI L
Sbjct: 113 ENDCLLEDFDISKPSALFFGTERAGLSEEIIKNADGFLKIPMVGFTESLNISVSAAIILQ 172
Query: 1850 EYTRQQR 1856
T + R
Sbjct: 173 NLTSRLR 179
>gi|397690903|ref|YP_006528157.1| tRNA guanosine-2'-O-methyltransferase [Melioribacter roseus P3M]
gi|395812395|gb|AFN75144.1| tRNA guanosine-2'-O-methyltransferase [Melioribacter roseus P3M]
Length = 196
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
ETIR + +V + N++ + RTC+ +++ K ++ S +A K
Sbjct: 15 ETIRNRQFSLRVVIENVHDPHNVSAVFRTCDAVGVPKVSLIYTVEEFPKISKVTSASANK 74
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
W+ + NSI+ ++ EGF V N+I L K LV G E GI
Sbjct: 75 WIETEKF--NSIQEGIDSLHKEGFKVYASYLDKNAINLYDLDLTGKVALVFGNEHRGISE 132
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
++ D IP G+++SLN+ V+ A+ L+E RQ++
Sbjct: 133 EMKEQADGLFYIPMYGMIQSLNISVAAAVTLYEAQRQRK 171
>gi|423121663|ref|ZP_17109347.1| hypothetical protein HMPREF9690_03669 [Klebsiella oxytoca 10-5246]
gi|376394042|gb|EHT06696.1| hypothetical protein HMPREF9690_03669 [Klebsiella oxytoca 10-5246]
Length = 356
Score = 65.1 bits (157), Expect = 3e-07, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLIS 1752
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 196 SVAQWVAKADAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGMLESGAAIRTAE 255
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
AE PI +S LE+ + G++++ + N PL + PKK VL LG+E+
Sbjct: 256 GGAEHVEPITG---DSFIDTLEQFRKAGYAIVS-TSSHNGTPLHKAELPKKMVLALGQER 311
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 312 DGLSDAAISSADLNVAIEGTGNVESLNVSVATGVLLAEWWRQNK 355
>gi|300772007|ref|ZP_07081877.1| SpoU family RNA methylase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760310|gb|EFK57136.1| SpoU family RNA methylase [Sphingobacterium spiritivorum ATCC 33861]
Length = 177
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
L++ K EG+ +L +EQ S+ L Q+ +K V G E G+ +I+ + D C+EIP
Sbjct: 90 LQKLKAEGYQILAIEQAEGSVMLHQFEPSSDQKYAFVFGNEVHGVDEEIMKISDGCLEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQRF 1857
Q G S N+ V+ I LW++ + RF
Sbjct: 150 QFGTKHSFNISVTIGIVLWDFVVKNRF 176
>gi|386284238|ref|ZP_10061460.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. AR]
gi|385344523|gb|EIF51237.1| tRNA (guanosine-2'-O-)-methyltransferase [Sulfurovum sp. AR]
Length = 217
Score = 65.1 bits (157), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 69/137 (50%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
NL+ + R+ + + A + + I+ A +W + + F++ KK
Sbjct: 33 NLSAIIRSADAVGVLDIYYATKEDASLRIHKTITQGAHRWTHRYRMHDDHKVSFIKEKKT 92
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
+GF V+ ++ + + K T+LV+G EKEG+ +I+ + D I IP G+V+SL
Sbjct: 93 QGFQVVVTHLEEQAVSFREIDYTKPTLLVMGNEKEGVSSEIVKLADEIIIIPMQGMVQSL 152
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NV V+ + L+E RQ+
Sbjct: 153 NVSVATGLILYEAQRQR 169
>gi|313204822|ref|YP_004043479.1| tRNA/rRNA methyltransferase (spou) [Paludibacter propionicigenes WB4]
gi|312444138|gb|ADQ80494.1| tRNA/rRNA methyltransferase (SpoU) [Paludibacter propionicigenes WB4]
Length = 177
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
LE K + ++V +EQ A S L + K +VLG E +G+ ++ D CIEIP
Sbjct: 90 LEELKAQAYTVFAIEQAAGSTLLPELALNPAMKYAVVLGNEVKGVQQSVVDACDGCIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTR 1853
Q G SLNV V+G I +WE+ R
Sbjct: 150 QFGTKHSLNVSVTGGIIIWEFFR 172
>gi|298208939|ref|YP_003717118.1| spoU protein (spoU) [Croceibacter atlanticus HTCC2559]
gi|83848866|gb|EAP86735.1| spoU protein (spoU) [Croceibacter atlanticus HTCC2559]
Length = 238
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 13/174 (7%)
Query: 1681 KEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADA 1740
+ ELF +VL R+ F + + ++ N + + R+C+VF + I +
Sbjct: 30 RRQELFKKVLSQRT----------NHFTVATEDVYQLHNTSAVIRSCDVFGVQNVHIIEE 79
Query: 1741 NILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
K + I++ A+KWV I +S++ ++ K +G+ ++ S L +
Sbjct: 80 QNAK-KIDREIAMGAQKWVTINRY--HSVQDSIKSLKEKGYQIVATSPHIESHNLRDFDV 136
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
K + + G EK+G+ ++++ D+ I+IP +G SLN+ VS AI L T +
Sbjct: 137 TKPSAIFFGTEKDGLSEEVLNQADSYIKIPMVGFTESLNISVSAAIILQHITNE 190
>gi|423125249|ref|ZP_17112928.1| hypothetical protein HMPREF9694_01940 [Klebsiella oxytoca 10-5250]
gi|376399500|gb|EHT12115.1| hypothetical protein HMPREF9694_01940 [Klebsiella oxytoca 10-5250]
Length = 357
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A + VL + NL + R+C F G+ + DA ++ + AE
Sbjct: 204 KADAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVIVQDAGVMESGAAIRTAEGGAEHVE 263
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +S LER + G++++ + N PL + PKK VLVLG+E +G+
Sbjct: 264 PITG---DSFIDTLERFRKAGYAIVS-TSSHNGTPLFKAELPKKMVLVLGQESDGLSDAA 319
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I D I I G V SLNV V+ + L E+ RQ +
Sbjct: 320 ISSADLNIAIEGTGNVESLNVSVATGVLLAEWWRQNK 356
>gi|423109761|ref|ZP_17097456.1| hypothetical protein HMPREF9687_03007 [Klebsiella oxytoca 10-5243]
gi|423115635|ref|ZP_17103326.1| hypothetical protein HMPREF9689_03383 [Klebsiella oxytoca 10-5245]
gi|376381025|gb|EHS93766.1| hypothetical protein HMPREF9689_03383 [Klebsiella oxytoca 10-5245]
gi|376381329|gb|EHS94067.1| hypothetical protein HMPREF9687_03007 [Klebsiella oxytoca 10-5243]
Length = 357
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A + VL + NL + R+C F G+ + DA ++ + AE
Sbjct: 204 KADAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVIVQDAGVMESGAAIRTAEGGAEHVE 263
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +S LER + G++++ + N PL + PKK VLVLG+E +G+
Sbjct: 264 PITG---DSFIDTLERFRKAGYAIVS-TSSHNGTPLFKAELPKKMVLVLGQESDGLSDAA 319
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I D I I G V SLNV V+ + L E+ RQ +
Sbjct: 320 ISSADLNIAIEGTGNVESLNVSVATGVLLAEWWRQNK 356
>gi|410096836|ref|ZP_11291821.1| hypothetical protein HMPREF1076_00999 [Parabacteroides goldsteinii
CL02T12C30]
gi|409225453|gb|EKN18372.1| hypothetical protein HMPREF1076_00999 [Parabacteroides goldsteinii
CL02T12C30]
Length = 176
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K +G+ V +EQ S+ LD+ + KK +V+G E +G+ ++ D CIEIPQ G
Sbjct: 94 KQQGYVVCAIEQAEGSVMLDKLLLDRNKKYAIVMGNEVKGVQQSVVDNCDMCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +W++ +Q
Sbjct: 154 KHSLNVSVTTGIVIWDFFKQ 173
>gi|419840292|ref|ZP_14363684.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386908324|gb|EIJ73021.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 238
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E + Q +L+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 79 LERMAGRSQSILLMLDEIQDPRNFGALIRSAEVFGVDGILIPERNSVRINETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
++VPI++V ++ + +E+ K + V G A + + +PKK VL+LG E G+
Sbjct: 139 IEYVPIIKV--TNLSNAIEKLKKIDYWVYGAAGEA-ELSCQEEQYPKKVVLILGNEGTGL 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ D I+I G + SLNV V+G I L E + Q++
Sbjct: 196 RKKVREHCDKLIKIQMRGKINSLNVSVAGGILLSEIAKFQKW 237
>gi|340755227|ref|ZP_08691923.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp. D12]
gi|421499451|ref|ZP_15946495.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|313685840|gb|EFS22675.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp. D12]
gi|402269704|gb|EJU19028.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 238
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E + Q +L+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 79 LERMAGRSQSILLMLDEIQDPRNFGALIRSAEVFGVDGILIPERNSVRINETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
++VPI++V ++ + +E+ K + V G A + + +PKK VL+LG E G+
Sbjct: 139 IEYVPIIKV--TNLSNAIEKLKKIDYWVYGAAGEA-ELSCQEEQYPKKVVLILGNEGTGL 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ D I+I G + SLNV V+G I L E + Q++
Sbjct: 196 RKKVREHCDKLIKIQMRGKINSLNVSVAGGILLSEIAKFQKW 237
>gi|340751360|ref|ZP_08688181.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium mortiferum
ATCC 9817]
gi|229421677|gb|EEO36724.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium mortiferum
ATCC 9817]
Length = 235
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E I + VL+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 79 LEKIAPMEKSIVLILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRINETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
++V IV+V +I + + K + V G E S Q +P +T LVLG E GI
Sbjct: 139 IEYVDIVKV--TNISDAISKLKKLDYWVYGAEGEG-SKDYSQEKYPSRTALVLGSEGNGI 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+ D I+IP G + SLNV V+G I L E +
Sbjct: 196 RKKVKESCDVLIKIPMYGKINSLNVSVAGGIILSEIVK 233
>gi|336173726|ref|YP_004580864.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334728298|gb|AEH02436.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 166
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 1704 RQQF--VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
+QQF ++ + PN+ L RT + F + + I ++ S T EK++
Sbjct: 12 KQQFSITIICENVTNAPNIGSLFRTADAFGVEKIIFCGSKIPLGRKMTKTSRTTEKFIKY 71
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDI 1819
E +++ + K +S+L LE T NS P+ + P K +V+G E GI
Sbjct: 72 QER--ETVEEVIIELKKSNYSILALEITDNSKPIHTFNVPTKKPIAIVIGDENFGISNTA 129
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ DA I I G S+NV + +AL+E T+Q R
Sbjct: 130 LKQTDAIIHIDMFGQNSSMNVVQATTVALYEITKQLR 166
>gi|298372824|ref|ZP_06982814.1| RNA methyltransferase, TrmH family [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275728|gb|EFI17279.1| RNA methyltransferase, TrmH family [Bacteroidetes oral taxon 274 str.
F0058]
Length = 182
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGL------AIADANILHDKQFQLISVT 1754
R ++ VL+ + + N+ + RT + F + A N +H
Sbjct: 20 RMAKIPLVLILDNVRSMHNIGAVLRTADAFCIEKVVLCGITATPPNNEIHKSALGAEFSV 79
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREK 1812
++ P ++PV +++ EG+ VL +EQT +S+PLD K LV G E
Sbjct: 80 RWEYSPEAQIPVRTLRD-------EGYRVLAVEQTQDSMPLDSLHIEGAAKYALVFGNEV 132
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+ I + D +EIPQ G SLNV V+ I +W + + R
Sbjct: 133 SGVEQATIDLCDGSVEIPQYGTKHSLNVSVACGIVVWTFFEKLR 176
>gi|281425955|ref|ZP_06256868.1| RNA methylase, SpoU family [Prevotella oris F0302]
gi|299142398|ref|ZP_07035530.1| RNA methylase, SpoU family [Prevotella oris C735]
gi|281399848|gb|EFB30679.1| RNA methylase, SpoU family [Prevotella oris F0302]
gi|298576120|gb|EFI47994.1| RNA methylase, SpoU family [Prevotella oris C735]
Length = 179
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 1773 LERKKHEGFSVLGLEQTANS-----IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+E H+G+ V +EQ S + +D+ + K +++G E +G+ +I M D C+
Sbjct: 90 VEALHHDGYFVYSIEQVEGSTMLQELTIDKPLTSKGYAVIMGNEVKGVKQQVIDMSDGCL 149
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
EIPQ G SLNV + I +WE+ R+ F
Sbjct: 150 EIPQFGTKHSLNVSTTAGIVMWEFVRKMLF 179
>gi|393785830|ref|ZP_10373974.1| hypothetical protein HMPREF1068_00254 [Bacteroides nordii CL02T12C05]
gi|392660944|gb|EIY54541.1| hypothetical protein HMPREF1068_00254 [Bacteroides nordii CL02T12C05]
Length = 181
Score = 65.1 bits (157), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 85 VNNAVEAVDNLKNEGYIVYSVEQAEGSIMLDELELDKTKKYAIVMGNEVKGVQQEVIDHS 144
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
D CIEIPQ G SLNV V+ I +W+ ++ +
Sbjct: 145 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLKI 178
>gi|427384905|ref|ZP_18881410.1| hypothetical protein HMPREF9447_02443 [Bacteroides oleiciplenus YIT
12058]
gi|425728166|gb|EKU91025.1| hypothetical protein HMPREF9447_02443 [Bacteroides oleiciplenus YIT
12058]
Length = 175
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+++ +EQ SI LD+ + K K +V+G E +G+ ++I D CIEIPQ G
Sbjct: 94 KKEGYTIYSVEQAEGSIMLDELVLDKAGKYAVVMGNEVKGVQQEVIDHSDGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ I +W+ ++ +
Sbjct: 154 KHSLNVSVTAGIVIWDLFKKLK 175
>gi|284929527|ref|YP_003422049.1| rRNA methylase [cyanobacterium UCYN-A]
gi|284809971|gb|ADB95668.1| rRNA methylase [cyanobacterium UCYN-A]
Length = 218
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
E ++ + ++ + + NL+ + RTC+ L + + N + F +S +EK
Sbjct: 11 EVLKKRQPHLTVLIEDVHKPHNLSAIIRTCDAVGILDLHVVNQNGKYP-TFSKVSQGSEK 69
Query: 1758 WVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
WV I + ++ + L+R+K F + + +I + + ++LG EK G+
Sbjct: 70 WVFITTYISIDDAINALKRRK---FKIYAAHFSKTAIDYRNVNYTEPVAILLGAEKWGVS 126
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ ++D I IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 127 KEAAQLVDGHITIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|188533075|ref|YP_001906872.1| methyltransferase [Erwinia tasmaniensis Et1/99]
gi|188028117|emb|CAO95974.1| Predicted tRNA/rRNA methyltransferase [Erwinia tasmaniensis Et1/99]
Length = 344
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
++ ++ VL I NL G+ R+C F A GL + DA++L + TAE
Sbjct: 192 QSGQKDCVLALEDIGNPHNLGGIMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAE 248
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + S L+ + G++++ + IPL + P K VLVLG+E++G+
Sbjct: 249 HVQAISGESFAAGLDAFRKAGYTIV-TTSSHQGIPLAKAELPAKMVLVLGQERDGLSDST 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ D + I G V SLNV V+ + L E+ RQ
Sbjct: 308 LEQGDLSVSISGTGNVESLNVSVATGVLLAEWWRQ 342
>gi|152971435|ref|YP_001336544.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|378980135|ref|YP_005228276.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419975756|ref|ZP_14491163.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981541|ref|ZP_14496815.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986846|ref|ZP_14501974.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992473|ref|ZP_14507428.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998696|ref|ZP_14513480.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004646|ref|ZP_14519281.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010392|ref|ZP_14524866.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016524|ref|ZP_14530815.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420022105|ref|ZP_14536278.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027528|ref|ZP_14541520.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033448|ref|ZP_14547253.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420040019|ref|ZP_14553639.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044878|ref|ZP_14558353.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050867|ref|ZP_14564162.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056428|ref|ZP_14569585.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061079|ref|ZP_14574072.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067790|ref|ZP_14580579.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072940|ref|ZP_14585572.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079433|ref|ZP_14591878.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420086298|ref|ZP_14598471.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421911362|ref|ZP_16341125.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421917156|ref|ZP_16346720.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424932248|ref|ZP_18350620.1| Putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425082738|ref|ZP_18485835.1| hypothetical protein HMPREF1306_03509 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428153127|ref|ZP_19000767.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428931600|ref|ZP_19005194.1| methyltransferase [Klebsiella pneumoniae JHCK1]
gi|428938368|ref|ZP_19011496.1| methyltransferase [Klebsiella pneumoniae VA360]
gi|449060439|ref|ZP_21738097.1| methyltransferase [Klebsiella pneumoniae hvKP1]
gi|150956284|gb|ABR78314.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|364519546|gb|AEW62674.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397342421|gb|EJJ35583.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397342827|gb|EJJ35982.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397346850|gb|EJJ39962.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359652|gb|EJJ52343.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397360724|gb|EJJ53396.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365325|gb|EJJ57950.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374904|gb|EJJ67218.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397378971|gb|EJJ71174.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385508|gb|EJJ77604.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393334|gb|EJJ85096.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395111|gb|EJJ86825.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397400948|gb|EJJ92585.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410459|gb|EJK01741.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397410820|gb|EJK02090.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420685|gb|EJK11745.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427599|gb|EJK18367.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431986|gb|EJK22654.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438434|gb|EJK28932.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397443653|gb|EJK33961.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397446901|gb|EJK37106.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405600990|gb|EKB74155.1| hypothetical protein HMPREF1306_03509 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|407806435|gb|EKF77686.1| Putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410114898|emb|CCM83750.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410120873|emb|CCM89345.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426305754|gb|EKV67869.1| methyltransferase [Klebsiella pneumoniae VA360]
gi|426307982|gb|EKV70054.1| methyltransferase [Klebsiella pneumoniae JHCK1]
gi|427536970|emb|CCM96905.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448873885|gb|EMB08954.1| methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 361
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAGEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 257
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L++ + G++++ + N PL + PKK VL LG+E+
Sbjct: 258 TAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLALGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSADLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|296131382|ref|YP_003638632.1| tRNA/rRNA methyltransferase SpoU [Cellulomonas flavigena DSM 20109]
gi|296023197|gb|ADG76433.1| tRNA/rRNA methyltransferase (SpoU) [Cellulomonas flavigena DSM 20109]
Length = 168
Score = 64.7 bits (156), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 30/144 (20%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A+G +A V WVP N+++
Sbjct: 36 NLGTLLRTCD---AAGACLA--------------VPRLPWVPEALARGNTLRRPACVHWT 78
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+LER++ G +V+G+E S+ L D + +TV+VLG E+ G+P + + +LD
Sbjct: 79 GSPVRWLERQRERGSAVVGVELAEESVRLGDLPVARGRTVMVLGHEQTGVPPEALDLLDV 138
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALW 1849
+EIP +G SLNV V+G++ L+
Sbjct: 139 VVEIPMVGTGASLNVAVAGSLVLY 162
>gi|425092821|ref|ZP_18495906.1| hypothetical protein HMPREF1308_03103 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|405612047|gb|EKB84813.1| hypothetical protein HMPREF1308_03103 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 361
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAGEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 257
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L++ + G++++ + N PL + PKK VL LG+E+
Sbjct: 258 TAEGGAEHVEPITGDSFIDTLDQFRKAGYAIVST-SSHNGTPLFKAELPKKMVLALGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSADLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|189464794|ref|ZP_03013579.1| hypothetical protein BACINT_01138 [Bacteroides intestinalis DSM
17393]
gi|189437068|gb|EDV06053.1| RNA methyltransferase, TrmH family [Bacteroides intestinalis DSM
17393]
Length = 175
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG++V +EQ SI LD+ KK +V+G E +G+ ++I D CIEIPQ G
Sbjct: 94 KKEGYTVYSVEQAEGSIMLDELSLDRTKKYAVVMGNEVKGVQQEVIDHSDGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWE 1850
SLNV V+ I +W+
Sbjct: 154 KHSLNVSVTAGIVIWD 169
>gi|116073311|ref|ZP_01470573.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp.
RS9916]
gi|116068616|gb|EAU74368.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp.
RS9916]
Length = 229
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDK--QFQLISVTAEKWVPIVEVPVNSIKH 1771
+++ NL+ + R+C+ A G A A L + F + ++KWVP+ + P S +
Sbjct: 29 VEKPHNLSAILRSCD---AVGALEAHAVSLQGRPRTFNSTAQGSQKWVPLYDHP--STED 83
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
+++ K +GF + G N+ F T VLG EK G+ ++D + IP
Sbjct: 84 AVQQLKAKGFKLYGTHLGVNAKDYRDCDFTGPTAFVLGAEKWGLSDTARDLMDEAVFIPM 143
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ A L+E RQ+R
Sbjct: 144 TGMVQSLNVSVAAATLLFEAVRQRR 168
>gi|224537157|ref|ZP_03677696.1| hypothetical protein BACCELL_02034 [Bacteroides cellulosilyticus DSM
14838]
gi|423223082|ref|ZP_17209551.1| hypothetical protein HMPREF1062_01737 [Bacteroides cellulosilyticus
CL02T12C19]
gi|224521212|gb|EEF90317.1| hypothetical protein BACCELL_02034 [Bacteroides cellulosilyticus DSM
14838]
gi|392639988|gb|EIY33795.1| hypothetical protein HMPREF1062_01737 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 175
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG++V +EQ SI LD+ KK +V+G E +G+ ++I D CIEIPQ G
Sbjct: 94 KKEGYTVYSVEQAEGSIMLDELSLDRTKKYAVVMGNEVKGVQQEVIDHSDGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWE 1850
SLNV V+ I +W+
Sbjct: 154 KHSLNVSVTAGIVIWD 169
>gi|157144486|ref|YP_001451805.1| putative methyltransferase [Citrobacter koseri ATCC BAA-895]
gi|157081691|gb|ABV11369.1| hypothetical protein CKO_00203 [Citrobacter koseri ATCC BAA-895]
Length = 348
Score = 64.7 bits (156), Expect = 5e-07, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 195 QADAQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 254
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +SI L+ + G++++ + PL P K VLVLGRE E +P
Sbjct: 255 PITG---DSIVDVLDDFRQAGYTIV-TTSSDQGKPLFSTALPAKMVLVLGRELESLPEAA 310
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V +LNV V+ + L E+ RQ +
Sbjct: 311 REPGDLCVKIDGTGNVENLNVSVATGVLLGEWWRQNK 347
>gi|238896030|ref|YP_002920766.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|386036058|ref|YP_005955971.1| putative methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|402779472|ref|YP_006635018.1| tRNA/rRNA methyltransferase yfiF [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|424831900|ref|ZP_18256628.1| RNA methyltransferase, TrmH family [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425075413|ref|ZP_18478516.1| hypothetical protein HMPREF1305_01306 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425086049|ref|ZP_18489142.1| hypothetical protein HMPREF1307_01479 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|238548348|dbj|BAH64699.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|339763186|gb|AEJ99406.1| putative methyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|402540412|gb|AFQ64561.1| putative tRNA/rRNA methyltransferase yfiF [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405594287|gb|EKB67702.1| hypothetical protein HMPREF1305_01306 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405605582|gb|EKB78611.1| hypothetical protein HMPREF1307_01479 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|414709338|emb|CCN31042.1| RNA methyltransferase, TrmH family [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 361
Score = 64.7 bits (156), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLIS 1752
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 201 SVAQWVAKAGEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVLESGAAIRTAE 260
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
AE PI +S L++ + G++++ + N PL + PKK VL LG+E+
Sbjct: 261 GGAEHVEPITG---DSFIDTLDQFRKAGYAIVS-TSSHNGTPLFKAELPKKMVLALGQER 316
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 317 DGLSDAAISSADLSVAIDGTGNVESLNVSVATGVLLAEWWRQNK 360
>gi|423300955|ref|ZP_17278979.1| hypothetical protein HMPREF1057_02120 [Bacteroides finegoldii
CL09T03C10]
gi|408472290|gb|EKJ90818.1| hypothetical protein HMPREF1057_02120 [Bacteroides finegoldii
CL09T03C10]
Length = 175
Score = 64.7 bits (156), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LD+ KK +V+G E +G+ ++I+
Sbjct: 83 VNNAVDAVDNLRKEGYVVYSVEQAEGSIMLDKLELDKTKKYAIVMGNEVKGVQQEVINHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|406965346|gb|EKD90982.1| hypothetical protein ACD_30C00054G0029 [uncultured bacterium]
Length = 183
Score = 64.7 bits (156), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
R+K S++ +EQ +SIP DQY + LV G E EGI +++++ D +E+P GV
Sbjct: 101 REKISNISIIAVEQQKDSIPYDQYNYSLPIALVAGHETEGISKEVLNLCDGVVELPMYGV 160
Query: 1835 VRSLNVHVSGAIALWE 1850
SLNV VS I L++
Sbjct: 161 NISLNVMVSLGIVLYQ 176
>gi|254432253|ref|ZP_05045956.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC 7001]
gi|197626706|gb|EDY39265.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC 7001]
Length = 229
Score = 64.7 bits (156), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDK--QFQLISVTAEKWVPIVEVPVNSIKH 1771
+++ NL+ + R+C+ A G+ A A L + F + ++KWVP+ P S
Sbjct: 29 VEKPHNLSAILRSCD---AVGVLEAHAVCLKGRLPTFNSTAQGSQKWVPLHRHP--SAAA 83
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
L+ + +GF + G +A ++ F T VLG EK G+ + ++D I IP
Sbjct: 84 ALQSLREQGFRLYGTHLSAEAVDYRSCDFTGPTAFVLGAEKWGLSPECAGLVDQAIVIPM 143
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ A L+E RQ++
Sbjct: 144 SGMVQSLNVSVATATLLFEALRQRQ 168
>gi|329963702|ref|ZP_08301148.1| RNA methyltransferase, TrmH family [Bacteroides fluxus YIT 12057]
gi|328527712|gb|EGF54704.1| RNA methyltransferase, TrmH family [Bacteroides fluxus YIT 12057]
Length = 216
Score = 64.7 bits (156), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 123 VNNSVEAVDNLKKEGYVVYSVEQAEGSIMLDELTLDKTKKYAIVMGNEVKGVQQEVIDHS 182
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
CIEIPQ G SLNV V+ I +W+ ++ R+
Sbjct: 183 HGCIEIPQYGTKHSLNVSVTAGIVIWDLFKKLRY 216
>gi|163789140|ref|ZP_02183583.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium ALC-1]
gi|159875553|gb|EDP69614.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium ALC-1]
Length = 218
Score = 64.7 bits (156), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 1693 RSLAMETIRASR-QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF-QL 1750
R + + A R + F + + ++ N + + R+C+VF L I + ++ K +
Sbjct: 18 RRTRFKKVLAQRTKHFTVATEDVYQLHNASAVMRSCDVFGIQELNIVEE--VNSKSIDRE 75
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
I++ A+KWV + +S K ++ K +G+ ++ A L + KK+ GR
Sbjct: 76 IAMGAQKWVDLNRF--HSTKSCIDHLKTKGYQIVATTPHAEDCDLIDFDITKKSCFFFGR 133
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E EG+ +I D ++IP +G SLN+ VS AI L T + R
Sbjct: 134 ETEGLSQQVIDEADCFLKIPMVGFTESLNISVSAAIILQHVTAELR 179
>gi|380693002|ref|ZP_09857861.1| tRNA/rRNA methyltransferase [Bacteroides faecis MAJ27]
Length = 175
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LDQ K+ +V+G E +G+ ++I
Sbjct: 83 VNNAVDAVDNLRKEGYIVYSIEQAEGSIMLDQLELDKTKRYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|94986799|ref|YP_594732.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|442555629|ref|YP_007365454.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
gi|94731048|emb|CAJ54411.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|441493076|gb|AGC49770.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
Length = 196
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
++ LV + I N++ + R+ + F + + + K S +A+KWV +
Sbjct: 21 QKNLTLVLANIHDPHNVSAIYRSADAFGIDTIHLYYTDTPFPKLGSKSSASAKKWVKTIY 80
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
S + K + + V+ T+ + PL + F T +++G E G+P ++ ++
Sbjct: 81 H--QSANKLIRMLKEDNYKVIATSCTSQAQPLLSHNFTGSTAIIMGNEHAGVPPELTGLV 138
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D+ + IP G+V+S NV V+ AI L E +RQ+
Sbjct: 139 DSELYIPMYGMVQSFNVSVAAAIILAEASRQR 170
>gi|383124751|ref|ZP_09945412.1| hypothetical protein BSIG_1503 [Bacteroides sp. 1_1_6]
gi|251841097|gb|EES69178.1| hypothetical protein BSIG_1503 [Bacteroides sp. 1_1_6]
Length = 175
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LDQ KK +V+G E +G+ ++I
Sbjct: 83 VNNAVDAVDNLRKEGYIVYSIEQAEGSIMLDQLELDKTKKYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWD 169
>gi|402844636|ref|ZP_10892988.1| RNA methyltransferase, TrmH family [Klebsiella sp. OBRC7]
gi|423104326|ref|ZP_17092028.1| hypothetical protein HMPREF9686_02932 [Klebsiella oxytoca 10-5242]
gi|376384189|gb|EHS96915.1| hypothetical protein HMPREF9686_02932 [Klebsiella oxytoca 10-5242]
gi|402273593|gb|EJU22790.1| RNA methyltransferase, TrmH family [Klebsiella sp. OBRC7]
Length = 357
Score = 64.3 bits (155), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA ++ + AE PI +S LER +
Sbjct: 222 NLGAIMRSCAHFGVKGVIVQDAGVMESGAAIRTAEGGAEHVEPITG---DSFIDTLERFR 278
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + N PL + PKK VLVLG+E +G+ I D I I G V S
Sbjct: 279 KAGYAIVS-TSSHNGTPLFKAELPKKMVLVLGQESDGLSDAAISSADLNIAIEGTGNVES 337
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 338 LNVSVATGVLLAEWWRQNK 356
>gi|375262297|ref|YP_005021467.1| putative methyltransferase [Klebsiella oxytoca KCTC 1686]
gi|365911775|gb|AEX07228.1| putative methyltransferase [Klebsiella oxytoca KCTC 1686]
Length = 357
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL + R+C F G+ + DA ++ + TAE VE + +S LER +
Sbjct: 222 NLGAIMRSCAHFGVKGVIVQDAGVM---ESGAAIRTAEGGAEHVEPITGDSFIDTLERFR 278
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + N PL + PKK VLVLG+E +G+ I D I I G V S
Sbjct: 279 KAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQESDGLSDAAISSADLNIAIEGTGNVES 337
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 338 LNVSVATGVLLAEWWRQNK 356
>gi|347734342|ref|ZP_08867389.1| spoU rRNA Methylase family protein [Desulfovibrio sp. A2]
gi|347516855|gb|EGY24053.1| spoU rRNA Methylase family protein [Desulfovibrio sp. A2]
Length = 187
Score = 64.3 bits (155), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 1697 METIRA----SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLI 1751
ME IR ++ LV + I N++ + R+C+ F +A ++ + D F ++
Sbjct: 1 MERIRRVLGWRQKDLTLVLANIHDPHNVSAIYRSCDAF-----GVAQVHLYYTDTAFPVL 55
Query: 1752 ----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
S +A KWV V + + + K G VL T + PL +Y + T ++
Sbjct: 56 GRKSSASARKWVDTVRH--SDAQSLMRTLKEGGHRVLATSCTPAARPLGEYDMTQPTAII 113
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+G E G+ ++ ++D + IP G+++S NV V+ A+ L E +RQ+
Sbjct: 114 MGNEHSGVAPELTALVDGEVYIPMYGMIQSFNVSVAAAVILSEASRQR 161
>gi|373112769|ref|ZP_09526996.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371654909|gb|EHO20270.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 173
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E + Q +L+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 14 LERMAGRSQSILLMLDEIQDPRNFGALIRSAEVFGVDGILIPERNSVRINETVVKTSTGA 73
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
++VPI++V ++ + +E+ K + V G A + + +PKK VL+LG E G+
Sbjct: 74 IEYVPIIKV--TNLSNAIEKLKKIDYWVYGAAGEA-ELSCQEEQYPKKVVLILGNEGTGL 130
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ D I+I G + SLNV V+G I L E + Q++
Sbjct: 131 RKKVREHCDKLIKIQMRGKINSLNVSVAGGILLSEIAKFQKW 172
>gi|393782625|ref|ZP_10370808.1| hypothetical protein HMPREF1071_01676 [Bacteroides salyersiae
CL02T12C01]
gi|392672852|gb|EIY66318.1| hypothetical protein HMPREF1071_01676 [Bacteroides salyersiae
CL02T12C01]
Length = 176
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ S+ LD+ KK +V+G E +G+ ++I
Sbjct: 83 VNNAVDAVDNLRKEGYIVYSVEQAEGSVMLDELKLDKTKKYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +WE
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTAGIVIWE 169
>gi|218288912|ref|ZP_03493163.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
LAA1]
gi|218241001|gb|EED08178.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
LAA1]
Length = 249
Score = 64.3 bits (155), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 1704 RQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL---ISVTAEKWV 1759
R ++ VA +D N A + R+ E F +A+ + + FQ ++ A KW+
Sbjct: 41 RTGYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVIEGK----QPFQPSKGVTQGAHKWL 96
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
I +P S+ ++ GF V + + P+D + T ++ G EK+G+ +
Sbjct: 97 TIHRMP--SVGRAIDALHARGFQVYATDLGDGAEPIDAVDLARPTAILFGNEKDGVSPEA 154
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D IP G V+S NV V+ AIAL+E TR+ R
Sbjct: 155 RERADGRFYIPMAGFVQSFNVSVAAAIALYELTRRAR 191
>gi|410619017|ref|ZP_11329935.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
gi|410161432|dbj|GAC34073.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
Length = 255
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 1702 ASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL---ISVTAEK 1757
A+RQ + +++ N++ L R+C+ + I + + D + +L S+ AE
Sbjct: 20 ATRQPSLTICLEQVNKPHNVSALIRSCD-----AVGINRIHAVWDNKARLRKKTSMGAEN 74
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
WV P SI + K +G VL + +++ + + K T ++LG+EK G
Sbjct: 75 WVYTDMHP--SIGDAVSHLKQQGMQVLVTHLSDDAVDFREIDYTKPTAIILGQEKTGATE 132
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+ I + D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 133 EAIALADKNIVIPMVGMVQSLNVSVAAAVVLYEAQRQREL 172
>gi|408370412|ref|ZP_11168189.1| tRNA guanosine-2'-O-methyltransferase [Galbibacter sp. ck-I2-15]
gi|407744170|gb|EKF55740.1| tRNA guanosine-2'-O-methyltransferase [Galbibacter sp. ck-I2-15]
Length = 218
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 1716 RIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
++ N + + R+C+VF L + + + + I++ +EKWV + ++ K ++R
Sbjct: 39 QLHNTSAVLRSCDVFGIQQLYVIEEQ-FGKRLDKNIAMGSEKWVDVHRF--DTAKQCIDR 95
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
+ +G+ ++ S PL+ + +K+V+ G EK G+ I+ D I IP G
Sbjct: 96 LRSDGYKIIATTPLKTSAPLEDFDISEKSVICFGTEKSGLSSAIMDQADGYIHIPMEGFS 155
Query: 1836 RSLNVHVSGAIAL 1848
SLN+ VS AI L
Sbjct: 156 ESLNISVSAAIIL 168
>gi|425067200|ref|ZP_18470316.1| hypothetical protein HMPREF1311_00345 [Proteus mirabilis WGLW6]
gi|404601379|gb|EKB01790.1| hypothetical protein HMPREF1311_00345 [Proteus mirabilis WGLW6]
Length = 367
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPV 1766
VL + N+ + R+C F G+ D+++L + TAE ++ +
Sbjct: 220 VLALEDVGNPHNVGAIMRSCAHFGVKGVISPDSSVL---ESGAAVRTAEGGAEYIQGIDA 276
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ LE+ K G++++ S+PL + P+K VL+LG+EK+G+ + D
Sbjct: 277 DNFAQTLEQFKQAGYTLVTTSSHKGSVPLAKAQLPEKMVLILGQEKDGLSDSTLKQGDMS 336
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I I G + SLNV V+ + L E+ RQ
Sbjct: 337 IYIGGTGHIESLNVSVASGVLLAEWWRQH 365
>gi|325279820|ref|YP_004252362.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
gi|324311629|gb|ADY32182.1| tRNA/rRNA methyltransferase (SpoU) [Odoribacter splanchnicus DSM
20712]
Length = 184
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
++R K EG+ + +EQ N+ L+ + +K L+ G E +G+ ++I + D CIEIP
Sbjct: 93 VDRLKKEGYRIFAIEQAENTTSLENFSLSPGQKYALIFGNEVKGVQQEVIDLSDGCIEIP 152
Query: 1831 QLGVVRSLNVHVSGAIALWE 1850
Q G S N+ V+ I LW+
Sbjct: 153 QFGTKHSFNISVTVGIVLWQ 172
>gi|395235123|ref|ZP_10413343.1| methyltransferase [Enterobacter sp. Ag1]
gi|394730408|gb|EJF30266.1| methyltransferase [Enterobacter sp. Ag1]
Length = 356
Score = 64.3 bits (155), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A + VL + NL G+ R+C F GL I DA++L + AE
Sbjct: 203 KAGEEDCVLALEDVGNPHNLGGIMRSCAHFGVKGLLIQDASLLESGAAIRTAEGGAEH-- 260
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
+V + + LE + G++++ + PL + PKK VLVLG+E++G+
Sbjct: 261 -VVAISGETFGDGLEAFRKAGYTIV-TTSSHQGTPLYKAELPKKMVLVLGQERDGVSDTT 318
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 319 FENADMSVAIEGTGNVESLNVSVATGVLLGEWWRQNK 355
>gi|88801799|ref|ZP_01117327.1| putative SpoU rRNA methylase family protein [Polaribacter irgensii
23-P]
gi|88782457|gb|EAR13634.1| putative SpoU rRNA methylase family protein [Polaribacter irgensii
23-P]
Length = 175
Score = 64.3 bits (155), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFP---KKTVLVLGREKEGIPVDIIHMLDACIE 1828
+E K E VL +EQ S LD + FP +K +VLG E +G+ +++ D CIE
Sbjct: 89 LIENLKKEKIKVLAIEQAEGSTKLDVF-FPDKGEKYAIVLGNEVKGVQQEVVDAADVCIE 147
Query: 1829 IPQLGVVRSLNVHVSGAIALWE 1850
IPQLG SLN+ V+ + +W+
Sbjct: 148 IPQLGTKHSLNISVTAGVVIWD 169
>gi|254786166|ref|YP_003073595.1| tRNA guanosine-2'-O-methyltransferase [Teredinibacter turnerae T7901]
gi|237686905|gb|ACR14169.1| tRNA guanosine-2'-O-methyltransferase [Teredinibacter turnerae T7901]
Length = 228
Score = 64.3 bits (155), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD--KQFQLISVTAEKWVPI-----VEVPVNSIKH 1771
NL+ + RTC+ A G+ + D + + S +AEKWV + + PVN +K
Sbjct: 32 NLSAITRTCD---AVGIDTIHCVMPEDGYQTYNGTSASAEKWVAVQHHSSISAPVNDLKR 88
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
EGF ++ N++ + K T LVLG E +G+ + +D + +P
Sbjct: 89 -------EGFQLVAANLGDNTLDYRNVDYTKPTALVLGAEVKGVSPEAAAAVDYNVTVPM 141
Query: 1832 LGVVRSLNVHVSGAIALWE--YTRQQ 1855
+G+V S NV V+ AI L E + RQQ
Sbjct: 142 VGMVESFNVSVAAAIILMEAQHQRQQ 167
>gi|53711292|ref|YP_097284.1| tRNA/rRNA methyltransferase [Bacteroides fragilis YCH46]
gi|60679598|ref|YP_209742.1| SpoU rRNA methylase family protein [Bacteroides fragilis NCTC 9343]
gi|265764737|ref|ZP_06093012.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_16]
gi|313149806|ref|ZP_07811999.1| tRNA/rRNA methyltransferase [Bacteroides fragilis 3_1_12]
gi|375356400|ref|YP_005109171.1| putative SpoU rRNA methylase family protein [Bacteroides fragilis
638R]
gi|52214157|dbj|BAD46750.1| tRNA/rRNA methyltransferase [Bacteroides fragilis YCH46]
gi|60491032|emb|CAH05780.1| putative SpoU rRNA methylase family protein [Bacteroides fragilis
NCTC 9343]
gi|263254121|gb|EEZ25555.1| tRNA/rRNA methyltransferase [Bacteroides sp. 2_1_16]
gi|301161080|emb|CBW20617.1| putative SpoU rRNA methylase family protein [Bacteroides fragilis
638R]
gi|313138573|gb|EFR55933.1| tRNA/rRNA methyltransferase [Bacteroides fragilis 3_1_12]
Length = 175
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 83 VNNAVETVDNLRSEGYVVYSVEQAEGSIMLDELTLDRSKKYAVVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTAGIVIWD 169
>gi|425073288|ref|ZP_18476394.1| hypothetical protein HMPREF1310_02732 [Proteus mirabilis WGLW4]
gi|404595623|gb|EKA96160.1| hypothetical protein HMPREF1310_02732 [Proteus mirabilis WGLW4]
Length = 367
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPV 1766
VL + N+ + R+C F G+ D+++L + TAE ++ +
Sbjct: 220 VLALEDVGNPHNVGAIMRSCAHFGVKGVISPDSSVL---ESGAAVRTAEGGAEYIQGIDA 276
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ LE+ K G++++ S+PL + P+K VL+LG+EK+G+ + D
Sbjct: 277 DNFAQTLEQFKQAGYTLVTTSSHKGSVPLAKAQLPEKMVLILGQEKDGLSDSTLKQGDMS 336
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I I G + SLNV V+ + L E+ RQ
Sbjct: 337 IYIGGTGHIESLNVSVASGVLLAEWWRQH 365
>gi|33239873|ref|NP_874815.1| tRNA/rRNA methyltransferase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237399|gb|AAP99467.1| rRNA methylase [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 229
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 11/153 (7%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK--QFQLISVTAEKWVPIVEV 1764
++A +++ NL+ + RTC+ A G+ A A K F + ++KWV +V+
Sbjct: 22 LTVLAEEVEKPHNLSAILRTCD---AIGILQAHAVFKQSKIPTFNSTAQGSQKWVKLVKH 78
Query: 1765 PVNSIKHFLERKKHEGFSVLG--LEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
P +I+ ++ K EGF + G L + A L Y P T VLG EK G+ +
Sbjct: 79 P--NIEVAIKSLKGEGFKIYGTNLNEQAKDYRLFDYKGP--TAFVLGAEKWGLSQLATSL 134
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+D I IP G+V+SLNV V+ A L+E RQ+
Sbjct: 135 VDESIFIPMRGMVQSLNVSVASATLLFEALRQR 167
>gi|424665681|ref|ZP_18102717.1| hypothetical protein HMPREF1205_01556 [Bacteroides fragilis HMW 616]
gi|404573934|gb|EKA78685.1| hypothetical protein HMPREF1205_01556 [Bacteroides fragilis HMW 616]
Length = 193
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 101 VNNAVETVDNLRSEGYVVYSVEQAEGSIMLDELTLDRSKKYAVVMGNEVKGVQQEVIDHS 160
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 161 DGCIEIPQYGTKHSLNVSVTAGIVMWD 187
>gi|428776587|ref|YP_007168374.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
gi|428690866|gb|AFZ44160.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
Length = 223
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 1703 SRQQFVLVASLID--RIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEK 1757
+R+Q L L D + N + + RTC+ VF A G+ + ++ F + ++K
Sbjct: 20 NRRQTDLTVLLEDVHKPHNFSAIIRTCDAVGVFSAHGV-YTEGDV---PAFSETAKGSQK 75
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
WV I P +K + K++ ++ T N++ Q + + T ++LG EK G+
Sbjct: 76 WVDIHTHP--DLKTAIGHLKNQNHTIYAAHLTENAVDYRQPDYTQPTCILLGAEKWGVSE 133
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I ++D I IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 134 EAISLVDQAIYIPMFGMVQSLNVSVAAAVILFEAQRQR 171
>gi|427716431|ref|YP_007064425.1| TrmH family RNA methyltransferase [Calothrix sp. PCC 7507]
gi|427348867|gb|AFY31591.1| RNA methyltransferase, TrmH family, group 3 [Calothrix sp. PCC 7507]
Length = 322
Score = 63.9 bits (154), Expect = 8e-07, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA+SLA ++VA I NL + RT E A GL I
Sbjct: 147 ELHDLIAQAKSLA--------DPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIP----- 193
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + +T+ +V+V ++++F LE K GF + G T S
Sbjct: 194 ---QRRAAGITST----VVKVAAGALENFPVARVINLSRALEELKDAGFWIYGTAVTG-S 245
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
PL F VLV+G E EG+ + D + IP LG SLN V+ +AL+E
Sbjct: 246 EPLHTVNFSGPIVLVVGSEGEGLSMLTQRSCDVLVSIPLLGKTPSLNASVASGMALYEVY 305
Query: 1853 RQQ 1855
RQ+
Sbjct: 306 RQR 308
>gi|197284301|ref|YP_002150173.1| methyltransferase [Proteus mirabilis HI4320]
gi|227358559|ref|ZP_03842884.1| RNA methyltransferase [Proteus mirabilis ATCC 29906]
gi|194681788|emb|CAR41011.1| putative tRNA/rRNA methyltransferase [Proteus mirabilis HI4320]
gi|227161270|gb|EEI46344.1| RNA methyltransferase [Proteus mirabilis ATCC 29906]
Length = 367
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPV 1766
VL + N+ + R+C F G+ D+++L + TAE ++ +
Sbjct: 220 VLALEDVGNPHNVGAIMRSCAHFGVKGVISPDSSVL---ESGAAVRTAEGGAEYIQGIDA 276
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ LE+ K G++++ S+PL + P+K VL+LG+EK+G+ + D
Sbjct: 277 DNFAQTLEQFKQAGYTLVTTSSHKGSVPLAKAQLPEKMVLILGQEKDGLSDSTLKQGDMS 336
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I I G + SLNV V+ + L E+ RQ
Sbjct: 337 IYIGGTGHIESLNVSVASGVLLAEWWRQH 365
>gi|336407547|ref|ZP_08588044.1| hypothetical protein HMPREF1018_00058 [Bacteroides sp. 2_1_56FAA]
gi|383116366|ref|ZP_09937116.1| hypothetical protein BSHG_1576 [Bacteroides sp. 3_2_5]
gi|423248034|ref|ZP_17229050.1| hypothetical protein HMPREF1066_00060 [Bacteroides fragilis
CL03T00C08]
gi|423252985|ref|ZP_17233916.1| hypothetical protein HMPREF1067_00560 [Bacteroides fragilis
CL03T12C07]
gi|423259652|ref|ZP_17240575.1| hypothetical protein HMPREF1055_02852 [Bacteroides fragilis
CL07T00C01]
gi|423263373|ref|ZP_17242376.1| hypothetical protein HMPREF1056_00063 [Bacteroides fragilis
CL07T12C05]
gi|423270082|ref|ZP_17249054.1| hypothetical protein HMPREF1079_02136 [Bacteroides fragilis
CL05T00C42]
gi|423272462|ref|ZP_17251409.1| hypothetical protein HMPREF1080_00062 [Bacteroides fragilis
CL05T12C13]
gi|423281369|ref|ZP_17260280.1| hypothetical protein HMPREF1203_04497 [Bacteroides fragilis HMW 610]
gi|423282665|ref|ZP_17261550.1| hypothetical protein HMPREF1204_01088 [Bacteroides fragilis HMW 615]
gi|335947451|gb|EGN09242.1| hypothetical protein HMPREF1018_00058 [Bacteroides sp. 2_1_56FAA]
gi|382973870|gb|EES88657.2| hypothetical protein BSHG_1576 [Bacteroides sp. 3_2_5]
gi|387775962|gb|EIK38065.1| hypothetical protein HMPREF1055_02852 [Bacteroides fragilis
CL07T00C01]
gi|392657512|gb|EIY51145.1| hypothetical protein HMPREF1067_00560 [Bacteroides fragilis
CL03T12C07]
gi|392660908|gb|EIY54506.1| hypothetical protein HMPREF1066_00060 [Bacteroides fragilis
CL03T00C08]
gi|392699627|gb|EIY92801.1| hypothetical protein HMPREF1079_02136 [Bacteroides fragilis
CL05T00C42]
gi|392707668|gb|EIZ00784.1| hypothetical protein HMPREF1056_00063 [Bacteroides fragilis
CL07T12C05]
gi|392708892|gb|EIZ01994.1| hypothetical protein HMPREF1080_00062 [Bacteroides fragilis
CL05T12C13]
gi|404582233|gb|EKA86928.1| hypothetical protein HMPREF1204_01088 [Bacteroides fragilis HMW 615]
gi|404583073|gb|EKA87756.1| hypothetical protein HMPREF1203_04497 [Bacteroides fragilis HMW 610]
Length = 193
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 101 VNNAVETVDNLRSEGYVVYSVEQAEGSIMLDELTLDRSKKYAVVMGNEVKGVQQEVIDHS 160
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 161 DGCIEIPQYGTKHSLNVSVTAGIVIWD 187
>gi|212692475|ref|ZP_03300603.1| hypothetical protein BACDOR_01971 [Bacteroides dorei DSM 17855]
gi|345514207|ref|ZP_08793720.1| tRNA/rRNA methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|423230623|ref|ZP_17217027.1| hypothetical protein HMPREF1063_02847 [Bacteroides dorei CL02T00C15]
gi|423240750|ref|ZP_17221864.1| hypothetical protein HMPREF1065_02487 [Bacteroides dorei CL03T12C01]
gi|423244332|ref|ZP_17225407.1| hypothetical protein HMPREF1064_01613 [Bacteroides dorei CL02T12C06]
gi|212664950|gb|EEB25522.1| RNA methyltransferase, TrmH family [Bacteroides dorei DSM 17855]
gi|229437189|gb|EEO47266.1| tRNA/rRNA methyltransferase [Bacteroides dorei 5_1_36/D4]
gi|392630767|gb|EIY24753.1| hypothetical protein HMPREF1063_02847 [Bacteroides dorei CL02T00C15]
gi|392642513|gb|EIY36279.1| hypothetical protein HMPREF1064_01613 [Bacteroides dorei CL02T12C06]
gi|392643712|gb|EIY37461.1| hypothetical protein HMPREF1065_02487 [Bacteroides dorei CL03T12C01]
Length = 178
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+GF VL +EQ S LD+ KK +V+G E +G+ ++++ D CIEIPQ G
Sbjct: 96 QGFIVLAIEQVEGSTLLDKLELDADKKYAIVMGNEVKGVQQEVVNACDGCIEIPQYGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE+ +
Sbjct: 156 SLNVSVTTGIIVWEFANK 173
>gi|167753257|ref|ZP_02425384.1| hypothetical protein ALIPUT_01529 [Alistipes putredinis DSM 17216]
gi|167659188|gb|EDS03318.1| RNA methyltransferase, TrmH family, group 3 [Alistipes putredinis DSM
17216]
Length = 243
Score = 63.9 bits (154), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E + +++ + + N +AR+ E A GL + N + I +A
Sbjct: 85 LERVPEDETPLIVLFDGVTDVRNFGAIARSAECAGAHGLIVPLKNAAPVNS-EAIRSSAG 143
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
I V SI++ L+ + EG+ V+G + + + D F K T LV+G E GI
Sbjct: 144 ALTAIPVCRVGSIRNTLKALQAEGYQVVGATEKSRKLLYDAD-FRKPTALVMGAEDTGIS 202
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ + D + IP +G + SLNV + A+ L+E RQ+
Sbjct: 203 KEVLKLCDEQLAIPMIGKIESLNVSAAAAVLLFEIVRQR 241
>gi|317967917|ref|ZP_07969307.1| tRNA/rRNA methyltransferase [Synechococcus sp. CB0205]
Length = 238
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL----HDKQFQLISVTAEKWVPIV 1762
+V +D+ NL+ + RTC+ A +A+++ + F + ++KWVP+
Sbjct: 29 LTVVMEQVDKPHNLSAILRTCDAVGA-----LEAHVVSLPGRPRTFNNTAKGSQKWVPLH 83
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
P SI+ L+ K +GF + G + +++ F + ++G EK G+ + + +
Sbjct: 84 PHP--SIEGCLQGLKDKGFRIYGTHLSVDAVDYRDCDFTGPSCFLMGAEKWGMSEEALAL 141
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+D + IP G+V+SLNV V+ A L+E RQ++
Sbjct: 142 VDQPLFIPMTGMVQSLNVSVAAATLLFEALRQRQ 175
>gi|299145105|ref|ZP_07038173.1| RNA methylase, SpoU family [Bacteroides sp. 3_1_23]
gi|298515596|gb|EFI39477.1| RNA methylase, SpoU family [Bacteroides sp. 3_1_23]
Length = 175
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG+ V +EQ SI D+ KK +V+G E +G+ ++I+
Sbjct: 83 VNNAVDAVDNLKNEGYIVYSVEQAEGSIMFDELQLDKTKKYAIVMGNEVKGVQQEVINHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
D CIEIPQ G SLNV V+ I +W+
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWD 169
>gi|298530210|ref|ZP_07017612.1| tRNA guanosine-2'-O-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509584|gb|EFI33488.1| tRNA guanosine-2'-O-methyltransferase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 197
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 23/174 (13%)
Query: 1693 RSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQL 1750
R L ++ + RQ+ LV + I N++ + R+C+ F A+ D ++L+ Q F
Sbjct: 10 RKLRIKDVLCRRQRDLTLVMNNIHDPHNVSAILRSCDAF-----AVPDVHLLYVGQPFPE 64
Query: 1751 I----SVTAEKWVPIVEVPVNSIKH-----FLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
+ S +A KWV I+H ++R + +G ++ SI L ++ F
Sbjct: 65 VGRKSSASARKWV-------RRIRHRDAGEMVQRLEGQGLCLIRTGFGPQSISLPEWDFT 117
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ T ++LG E G+ D+ M+ I IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 118 RPTAVILGNEHSGVQEDLEQMVAQEIYIPMQGMVQSLNVSVAAAVILYEAFRQR 171
>gi|385785640|ref|YP_005816749.1| putative methyltransferase [Erwinia sp. Ejp617]
gi|310764912|gb|ADP09862.1| putative methyltransferase [Erwinia sp. Ejp617]
Length = 344
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A ++ V+ I NL G+ R+C F A GL + DA++L + TAE
Sbjct: 192 QAGQKDCVVALEDIGNPHNLGGIMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAE 248
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + S L+ + G++++ + +PL P K VLVLG+E++G+
Sbjct: 249 HVQAISGESFAAGLDAFRQAGYTIV-TTSSHQGVPLSTAELPAKMVLVLGQERDGLSDST 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 308 FQQGDLSVSISGTGNVESLNVSVATGVLLAEWWRQ 342
>gi|85818933|gb|EAQ40092.1| SpoU rRNA methylase family protein [Dokdonia donghaensis MED134]
Length = 218
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 30/200 (15%)
Query: 1673 YKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKA 1732
Y Q E+ +LFD+VL R+ F + + ++ N + + R+CE F
Sbjct: 8 YLQSFLTERRVQLFDKVLSERTT----------HFTVAVEDVYQLHNTSAVIRSCESFGV 57
Query: 1733 SGL-AIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
L I + N D++ I++ A+KWV + NS ++ + +G+ ++
Sbjct: 58 QELHVIEEVNAKRIDRE---IAMGAQKWVDVARH--NSASSCIKSLREQGYKIVATSPHK 112
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL-- 1848
++ L+++ +K + GRE EG+ ++ D I IP +G SLN+ VS AI L
Sbjct: 113 DAHRLEEFDVTEKAAIFFGRETEGLSELVMEEADDFIYIPMVGFTESLNISVSAAITLQY 172
Query: 1849 -----------WEYTRQQRF 1857
W ++ Q+ F
Sbjct: 173 IMTKLKSSAVAWRFSEQELF 192
>gi|336246703|ref|YP_004590413.1| putative methyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334732759|gb|AEG95134.1| putative methyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 356
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 196 SVAQWVAKAEAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 252
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L + + G++++ + N PL + PKK VLVLG+E+
Sbjct: 253 TAEGGAEHVEPITGDSFIDTLTQFRQAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQER 311
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 312 DGLSDAAISSSDLNVAIDGTGNVESLNVSVATGVLLAEWWRQNK 355
>gi|194476556|ref|YP_002048735.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
gi|171191563|gb|ACB42525.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
Length = 229
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 1701 RASRQQFVL---------VASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ--FQ 1749
R R QFVL + +++ NL+ + R+C+ A G+ A A L ++ FQ
Sbjct: 7 RFRRLQFVLNYRISDLTVILEHVEKSHNLSAILRSCD---AVGIIEAHAVSLRERLRIFQ 63
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
++ ++KWV + NSI + + K GF + G SI F + +LG
Sbjct: 64 NTALGSQKWVRLRNY--NSIVPAITQLKQRGFKIYGTNLGIGSIDYRNCDFLGPSSFLLG 121
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
EK G+ + ++D I IP G+V+SLNV V+ AI L+E RQ++
Sbjct: 122 AEKWGLSQEAAELVDQSITIPMSGMVQSLNVSVATAILLFEVLRQRQ 168
>gi|226331060|ref|ZP_03806578.1| hypothetical protein PROPEN_04990 [Proteus penneri ATCC 35198]
gi|225201855|gb|EEG84209.1| RNA methyltransferase, TrmH family [Proteus penneri ATCC 35198]
Length = 367
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPV 1766
VL + N+ + R+C F G+ D+ +L + TAE ++ +
Sbjct: 220 VLALEDVGNPHNVGAIMRSCAHFGVKGVISPDSAVL---ESGAAVRTAEGGAEYIQGIDA 276
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ L++ K G++++ S+PL + P K VL+LG+EK+G+ ++ D
Sbjct: 277 DNFAQTLDKFKKAGYTLVATSSHKGSVPLSKAQLPAKMVLILGQEKDGLSESTLNQGDMS 336
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I I G V SLNV V+ + L E+ RQ +
Sbjct: 337 IYIGGTGHVESLNVSVASGVLLAEWWRQHQ 366
>gi|227536035|ref|ZP_03966084.1| SpoU rRNA methylase family protein [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243932|gb|EEI93947.1| SpoU rRNA methylase family protein [Sphingobacterium spiritivorum
ATCC 33300]
Length = 177
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ +L +EQ S+ L Q+ +K V G E G+ +I+ + D C+EIPQ G
Sbjct: 94 KDEGYQILAIEQAEGSVMLHQFEPSSDQKYAFVFGNEVHGVDEEIMKISDGCLEIPQFGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
S N+ V+ I LW++ + RF
Sbjct: 154 KHSFNISVTIGIVLWDFVVKNRF 176
>gi|444355320|ref|YP_007391464.1| hypothetical tRNA/rRNA methyltransferase yfiF [Enterobacter aerogenes
EA1509E]
gi|443906150|emb|CCG33924.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Enterobacter aerogenes EA1509E]
Length = 342
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
S+A +A + VL + NL + R+C F G+ + DA +L +
Sbjct: 182 SVAQWVAKAEAEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVVQDAGVL---ESGAAIR 238
Query: 1754 TAEKWVPIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
TAE VE + +S L + + G++++ + N PL + PKK VLVLG+E+
Sbjct: 239 TAEGGAEHVEPITGDSFIDTLTQFRQAGYAIVST-SSHNGTPLFKAELPKKMVLVLGQER 297
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ I D + I G V SLNV V+ + L E+ RQ +
Sbjct: 298 DGLSDAAISSSDLNVAIDGTGNVESLNVSVATGVLLAEWWRQNK 341
>gi|29348574|ref|NP_812077.1| tRNA/rRNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482]
gi|298386955|ref|ZP_06996509.1| RNA methylase, SpoU family [Bacteroides sp. 1_1_14]
gi|29340479|gb|AAO78271.1| tRNA/rRNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482]
gi|298260105|gb|EFI02975.1| RNA methylase, SpoU family [Bacteroides sp. 1_1_14]
Length = 175
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHML 1823
VN+ ++ + EG+ V +EQ SI LD+ KK +V+G E +G+ ++I
Sbjct: 83 VNNAVDAVDNLRKEGYIVYSIEQAEGSIMLDRLELDKTKKYAIVMGNEVKGVQQEVIDHS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 143 DGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|213962459|ref|ZP_03390721.1| SpoU protein [Capnocytophaga sputigena Capno]
gi|213954785|gb|EEB66105.1| SpoU protein [Capnocytophaga sputigena Capno]
Length = 220
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLAIADANILHDKQFQLISV 1753
+E I F + + ++ N + + RTCEVF +A + L K I++
Sbjct: 22 LEIIVQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFGKRLDAK----IAM 77
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A+KWV + N + ++ + +G+ ++ N+ L+ + KK+ G EKE
Sbjct: 78 GAQKWVDVFRY--NDTQSCIDTLRTQGYQIVATTPHKNAYFLNDFDITKKSAFFFGTEKE 135
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 136 GLSAQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|383451654|ref|YP_005358375.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380503276|emb|CCG54318.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 175
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K E V +EQT N++ LD + ++T L+ G E +G+ D I++ D IEIPQLG
Sbjct: 94 KAENVKVYSIEQTENAMMLDNFQPERETKYALIFGNEVKGVSQDAINLSDGVIEIPQLGS 153
Query: 1835 VRSLNVHVSGAIALWEY 1851
SLN+ VS I +W++
Sbjct: 154 KHSLNISVSAGIVIWDF 170
>gi|387791394|ref|YP_006256459.1| rRNA methylase [Solitalea canadensis DSM 3403]
gi|379654227|gb|AFD07283.1| rRNA methylase [Solitalea canadensis DSM 3403]
Length = 177
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIA--DANILHDKQFQLISVTAEKWVP--IVE 1763
V+V + + N+ + RT + F G+ + A H ++ + ++ A + V E
Sbjct: 26 VIVLDNVRSMNNIGSIFRTSDAFALEGIYLCGISAQPPH-REIEKTALGATQSVDWFYFE 84
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIH 1821
++K E EG+ VL +EQ NS+ L + KK L+ G E G+ +++
Sbjct: 85 STQEAVKDLHE----EGYEVLAIEQAENSMMLQNFRPEKDKKYALIFGNEVNGVDDEVMK 140
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
M+D CIEIPQ G S N+ VS I W++ + +
Sbjct: 141 MVDGCIEIPQFGTKHSFNIVVSMGIVGWDFYSKMKL 176
>gi|352096318|ref|ZP_08957198.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
gi|351677012|gb|EHA60163.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
Length = 229
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 13/165 (7%)
Query: 1698 ETIRASRQQ----FVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQL 1750
E +RA Q ++ +D+ NL+ + R+C+ V +A ++++ + ++ Q
Sbjct: 9 ERLRAVLNQRMANLTVLVEHVDKPHNLSAILRSCDAVGVLEAHAVSLSGRSRTYNSTAQ- 67
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
+++WVP+ + P +I+ +++ K GF + G + +++ F + VLG
Sbjct: 68 ---GSQRWVPLHDHP--NIEAAVKKLKDRGFHLYGTNLSVDAVDYRDCDFTGPSAFVLGA 122
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EK G+ + ++D + IP G+V+SLNV V+ A L+E RQ+
Sbjct: 123 EKWGLSENATQLMDTDVFIPMRGMVQSLNVSVATATLLFEALRQR 167
>gi|159902962|ref|YP_001550306.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9211]
gi|159888138|gb|ABX08352.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9211]
Length = 229
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGL--AIADANILHDKQFQLISVTAEKWVPIVEV 1764
++ +++ NL+ + RTC+ A+G+ A A A + F + ++KWVP+ +
Sbjct: 22 LTILVEQVEKPHNLSAIMRTCD---AAGVLEAHAVARETKTRTFNSTAQGSQKWVPLKDH 78
Query: 1765 P-VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ + FL K +GF + G + ++I + T VLG EK G+ ++
Sbjct: 79 KNIEAAALFL---KKQGFKLYGTNLSVDAIDYRYCDYTGPTAFVLGAEKWGLSEPATRLM 135
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
DA I IP G+V+SLNV V+ + L+E RQ+
Sbjct: 136 DAAIYIPMRGMVQSLNVSVAASALLFEALRQR 167
>gi|406991177|gb|EKE10725.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 163
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA-------------DANILHDKQFQ 1749
++++ ++A I N+ + RTC+ AS + + +K +
Sbjct: 2 NQKKLYIIAHNIRSAHNVGAIFRTCDGAGASKIYLTGYTPEPASSEKEEKMKTKAEKMLE 61
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
++ AE VP V I + + K EGFS++ LE+T NS P+++ L+LG
Sbjct: 62 KTALGAENNVPWERV--ERIDDLMLKLKKEGFSIVALEKTKNSTPMNELHMNFPIALILG 119
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
E +G+ +++ D+ +EIP G SLNV V+ I +++
Sbjct: 120 NEVDGVNEELLEKCDSIMEIPMRGKKESLNVSVAAGIGIYK 160
>gi|126656950|ref|ZP_01728128.1| rRNA methylase SpoU [Cyanothece sp. CCY0110]
gi|126621788|gb|EAZ92497.1| rRNA methylase SpoU [Cyanothece sp. CCY0110]
Length = 220
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFLE 1774
NL+ + RTC+ + I D + ++ F +S ++KWV + P +IK +
Sbjct: 34 NLSAIIRTCD-----AVGILDVHCINTTDEFPTFSQVSQGSDKWVFLHSHP--NIKTGIN 86
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K + F++ T S+ + + + T ++LG EK G+ + +++D I +P LG+
Sbjct: 87 HLKRQNFNIYAAHFTDQSLDYREIDYTQPTAILLGAEKWGVSEEAANLVDGHIIVPMLGM 146
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLNV V+ A+ L+E RQ+
Sbjct: 147 VQSLNVSVAAAVILFEAQRQR 167
>gi|149189234|ref|ZP_01867521.1| tRNA guanosine-2'-O-methyltransferase [Vibrio shilonii AK1]
gi|148836988|gb|EDL53938.1| tRNA guanosine-2'-O-methyltransferase [Vibrio shilonii AK1]
Length = 228
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 1690 LQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
L+ + E ++A + L+ + + N++ + RT + A+G+ A + D++ +
Sbjct: 3 LERYTRIQEVLKARQPDLTLLLEQVHKPNNVSAVIRTAD---AAGVHKVHA-VWPDEKMR 58
Query: 1750 LISVTAEKWVPIVEVPV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
+S T+ VEV +++ + K +G VL + N++ + K T ++L
Sbjct: 59 TLSHTSAGARNWVEVETHDTVADAVRTLKSQGMQVLATNLSENAVDFRDIDYTKPTAIIL 118
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G EK GI D + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 119 GGEKHGITQDALTEADQDIIIPMVGMVQSLNVSVASALILFEAQRQRQ 166
>gi|298373202|ref|ZP_06983192.1| RNA methyltransferase, TrmH family, group 3 [Bacteroidetes oral taxon
274 str. F0058]
gi|298276106|gb|EFI17657.1| RNA methyltransferase, TrmH family, group 3 [Bacteroidetes oral taxon
274 str. F0058]
Length = 248
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK---- 1757
A + ++ + I N ++RTCE A DA +L I+ A K
Sbjct: 96 AGKTPLIVALDGVTDIRNFGAISRTCEC------AGVDAILLPSYCSATINADAVKTSAG 149
Query: 1758 ---WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ-YMFPKKTVLVLGREKE 1813
++P+ +++ ++ K+ GF+++ L + AN DQ Y P TVLVLG E
Sbjct: 150 ALHYLPVCRT--DNLCQAIKFLKNSGFTIIALSEKANIAYTDQDYSSP--TVLVLGAEDR 205
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
GI +++ + D+ ++IP LG + SLNV V+ I ++E + ++
Sbjct: 206 GISSEVLSLCDSKVKIPVLGKIESLNVSVAAGIVIYEAVKSRQ 248
>gi|359776978|ref|ZP_09280277.1| putative RNA methyltransferase [Arthrobacter globiformis NBRC 12137]
gi|359305717|dbj|GAB14106.1| putative RNA methyltransferase [Arthrobacter globiformis NBRC 12137]
Length = 223
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 53/90 (58%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+++ F+ + EG +++G++ +S+PL+ Y P+K VLV G+E G+ ++ +A +
Sbjct: 130 TVEDFVAWAQAEGLAIIGIDIFPDSVPLETYELPQKCVLVFGQEGPGLTPEVHEAAEATL 189
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I Q G RS+N + AIA+ + R+ F
Sbjct: 190 SIEQFGSTRSINAGSAAAIAMHAWVRRHVF 219
>gi|381187806|ref|ZP_09895368.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacterium frigoris
PS1]
gi|379649594|gb|EIA08167.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacterium frigoris
PS1]
Length = 220
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
E F +VL+ R+ F + I ++ N + + R+CEVF L + +
Sbjct: 20 EKFLKVLENRT----------NHFTIAVEDIFQMHNTSAVMRSCEVFGIQELNVIEQRYG 69
Query: 1744 H--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
DK+ I++ A+KWV I +SI ++ K++G+ ++ +D +
Sbjct: 70 KSIDKE---IAMGAQKWVDIN--TYDSITDCVDTLKNKGYQIIATTPHDTDCLMDDFDIT 124
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K + L G E++G+ +I+ D ++IP +G SLN+ VS AI + T + R
Sbjct: 125 KPSALFFGTERDGLSEEILLRADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLR 179
>gi|303248118|ref|ZP_07334383.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio fructosovorans
JJ]
gi|302490517|gb|EFL50425.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio fructosovorans
JJ]
Length = 196
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 1689 VLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DK 1746
+ + R+ + + A RQ LV + I N++ + R+C+ F I ++L+ D
Sbjct: 5 ITERRAGRIRDVLAKRQTDLTLVINNIHDPHNVSAILRSCDAF-----GIHRVHLLYTDT 59
Query: 1747 QFQLI----SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
F + S +A+KWV P K +GF+++ + + PL ++
Sbjct: 60 AFPALGKKSSGSAKKWVETTRHP--DAASLASSLKGQGFALVATSFSETARPLQEWDLTG 117
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
K ++LG E G+ ++ +D + IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 118 KVAIILGNEHRGVDEELAPYVDGALYIPMQGMVQSLNVSVAAAVILYEGFRQR 170
>gi|118580099|ref|YP_901349.1| RNA methyltransferase [Pelobacter propionicus DSM 2379]
gi|118502809|gb|ABK99291.1| RNA methyltransferase, TrmH family, group 3 [Pelobacter propionicus
DSM 2379]
Length = 251
Score = 63.2 bits (152), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
R F+LV I NL L RT ASG+ I D+ + +
Sbjct: 91 REDAAGFLLVLDGIQDPHNLGALIRTAACAGASGVVIP-----RDRACAITPAAEKASAG 145
Query: 1761 IVEV----PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
VE V +I LE+ K G+ V GL A++ L + F K LV+G E EGI
Sbjct: 146 AVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEADA-SLYEVAFSGKIALVIGGEGEGIR 204
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ DA + IP G V SLN V+G IAL+E R R
Sbjct: 205 PLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVARCLR 244
>gi|449467136|ref|XP_004151281.1| PREDICTED: uncharacterized tRNA/rRNA methyltransferase YfiF-like
[Cucumis sativus]
Length = 199
Score = 63.2 bits (152), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 64 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLEALEQFR 120
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
+ G++++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 121 NAGYTIVTTSSRA-ATPLFKATLPRKMVLVLGQERDGLSDAALSSADMSVSIDGTGNVES 179
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 180 LNVSVATGVLLAEWWRQNK 198
>gi|218131716|ref|ZP_03460520.1| hypothetical protein BACEGG_03337 [Bacteroides eggerthii DSM 20697]
gi|217986019|gb|EEC52358.1| RNA methyltransferase, TrmH family [Bacteroides eggerthii DSM 20697]
Length = 176
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG++V +EQ SI L++ K K +V+G E +G+ ++I
Sbjct: 84 VNNTVEAVDNLKNEGYTVYSVEQAEGSIMLNELTLDKSRKYTIVMGNEVKGVQQEVIDHS 143
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
CIEIPQ G SLNV V+ I +W+
Sbjct: 144 HGCIEIPQYGTKHSLNVSVTAGIVIWD 170
>gi|167764000|ref|ZP_02436127.1| hypothetical protein BACSTE_02383 [Bacteroides stercoris ATCC 43183]
gi|167698116|gb|EDS14695.1| RNA methyltransferase, TrmH family [Bacteroides stercoris ATCC 43183]
Length = 176
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG++V +EQ SI L++ K K +V+G E +G+ ++I
Sbjct: 84 VNNTVEAVDNLKNEGYTVYSVEQAEGSIMLNELTLDKNRKYAIVMGNEVKGVQQEVIDHS 143
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
CIEIPQ G SLNV V+ I +W+
Sbjct: 144 HGCIEIPQYGTKHSLNVSVTAGIVIWD 170
>gi|218258662|ref|ZP_03474983.1| hypothetical protein PRABACTJOHN_00638 [Parabacteroides johnsonii DSM
18315]
gi|218225287|gb|EEC97937.1| hypothetical protein PRABACTJOHN_00638 [Parabacteroides johnsonii DSM
18315]
Length = 179
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+++ K +G++V +EQ S LD+ + K K +++G E +G+ ++ D CIEIP
Sbjct: 93 VDKLKQQGYTVCAVEQAEGSTMLDKLLLDKNKKYAVIMGNEVKGVQQCVVDNCDMCIEIP 152
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G SLNV V+ I +W++ +Q
Sbjct: 153 QYGTKHSLNVSVTTGIIIWDFFKQ 176
>gi|423342449|ref|ZP_17320163.1| hypothetical protein HMPREF1077_01593 [Parabacteroides johnsonii
CL02T12C29]
gi|409218363|gb|EKN11335.1| hypothetical protein HMPREF1077_01593 [Parabacteroides johnsonii
CL02T12C29]
Length = 176
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+++ K +G++V +EQ S LD+ + K K +++G E +G+ ++ D CIEIP
Sbjct: 90 VDKLKQQGYTVCAVEQAEGSTMLDKLLLDKNKKYAVIMGNEVKGVQQCVVDNCDMCIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G SLNV V+ I +W++ +Q
Sbjct: 150 QYGTKHSLNVSVTTGIIIWDFFKQ 173
>gi|373469603|ref|ZP_09560785.1| RNA methyltransferase, TrmH family, group 3 [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371764297|gb|EHO52718.1| RNA methyltransferase, TrmH family, group 3 [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 260
Score = 63.2 bits (152), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 1689 VLQARSLAMETI--RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
V + + +E+I A R +L+ + NL L R E SG+ +++ N +
Sbjct: 92 VAKRKEYTLESILKNAGRPFSLLILDGLQDPGNLGTLVRAGEGAGISGIIMSE-NTVDIY 150
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
++I T + + V +K +++ +G SV +I D+ + K T
Sbjct: 151 NPKVIRSTMGSIFRVPFIYVKDLKEVIDKLNSKGISVYA-SSLEGAIEYDRPDYKKDTAF 209
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
++G E GI +I+ M D I+IP LG V SLN V+G+I ++E RQ+R
Sbjct: 210 IIGNEAAGISKEILEMADKKIKIPMLGEVESLNAAVAGSILMYEAVRQRRL 260
>gi|149372584|ref|ZP_01891696.1| tRNA/rRNA methyltransferase (SpoU) [unidentified eubacterium SCB49]
gi|149354627|gb|EDM43191.1| tRNA/rRNA methyltransferase (SpoU) [unidentified eubacterium SCB49]
Length = 232
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E+ E F+++L R+ + F +V + +I N + + R+C+ F L + +
Sbjct: 26 EERMERFEKILSERT----------KHFTVVTEDVYQIHNTSAVMRSCDAFGIQDLHLVE 75
Query: 1740 ANILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
DK+ I++ A+KWV + ++++ + K +G+ ++ A++ L
Sbjct: 76 EKFGKRVDKE---IAMGAQKWVTLHRH--SNLEDCVSTLKDKGYQIVATSPHADASYLHD 130
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
+ + KK+ + G EK+G+ ++ DA I++P G SLN+ VS AI +
Sbjct: 131 FDYTKKSAIFFGTEKDGLTEGVLEQADALIKVPMYGFTESLNISVSAAIIM 181
>gi|255534645|ref|YP_003095016.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacteriaceae
bacterium 3519-10]
gi|255340841|gb|ACU06954.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Flavobacteriaceae
bacterium 3519-10]
Length = 255
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
++ AE WV + ++P N L K+ G+ +L + N+ L Y + LV G
Sbjct: 111 VTKGAETWVEVEKMPHNL--ESLTEIKNRGYKILAVSPEKNATMLPDYQLKEPVALVFGT 168
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
EKEG+ +I+ D + IP G RS NV V+ AI +E
Sbjct: 169 EKEGVTEEILDFADETVAIPMYGFTRSFNVSVAAAICFYE 208
>gi|259907580|ref|YP_002647936.1| methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|387870339|ref|YP_005801709.1| hypothetical protein EPYR_00958 [Erwinia pyrifoliae DSM 12163]
gi|224963202|emb|CAX54686.1| Predicted tRNA/rRNA methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283477422|emb|CAY73338.1| hypothetical protein EPYR_00958 [Erwinia pyrifoliae DSM 12163]
Length = 344
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A ++ V+ I NL G+ R+C F A GL + DA++L + TAE
Sbjct: 192 QAGQKDCVVALEDIGNPHNLGGIMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAE 248
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V + S L+ + G++++ + +PL P K VLVLG+E++G+
Sbjct: 249 HVRAISGESFAAGLDAFRQAGYTIV-TTSSHQGVPLSTAELPAKMVLVLGQERDGLSDST 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 308 FRQGDLSVSISGTGNVESLNVSVATGVLLAEWWRQ 342
>gi|384135990|ref|YP_005518704.1| tRNA/rRNA methyltransferase SpoU [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290075|gb|AEJ44185.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 262
Score = 63.2 bits (152), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL---ISVTAEKWVPIVEVPVNSIK 1770
+D N A + R+ E F +A+ + + FQ ++ A KW+ + +P I
Sbjct: 56 VDDGHNQAAILRSAEAFGVQHVAVIEGK----QPFQPSKGVTQGAHKWLTLHRMP--DIG 109
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
++ GF V + + PLD + T ++ G EK+G+ + D IP
Sbjct: 110 RAIDLLHARGFQVYATDLGEGAQPLDAVDLARPTAILFGNEKDGVSAEARERADGRFYIP 169
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
G V+S NV V+ AIAL+E TR+ R
Sbjct: 170 MAGFVQSFNVSVAAAIALYELTRRAR 195
>gi|317474663|ref|ZP_07933937.1| SpoU rRNA methylase [Bacteroides eggerthii 1_2_48FAA]
gi|316909344|gb|EFV31024.1| SpoU rRNA methylase [Bacteroides eggerthii 1_2_48FAA]
Length = 176
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHML 1823
VN+ ++ K+EG++V +EQ SI L++ K K +V+G E +G+ ++I
Sbjct: 84 VNNTVEAVDNLKNEGYTVYSVEQAEGSIMLNELTLDKSRKYAIVMGNEVKGVQQEVIDHS 143
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
CIEIPQ G SLNV V+ I +W+
Sbjct: 144 HGCIEIPQYGTKHSLNVSVTAGIVIWD 170
>gi|256820355|ref|YP_003141634.1| tRNA/rRNA methyltransferase SpoU [Capnocytophaga ochracea DSM 7271]
gi|429747304|ref|ZP_19280580.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|256581938|gb|ACU93073.1| tRNA/rRNA methyltransferase (SpoU) [Capnocytophaga ochracea DSM 7271]
gi|429163442|gb|EKY05668.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 220
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLA 1736
E+ E F QV+ AR+ F + + ++ N + + RTCEVF +A +
Sbjct: 15 EERKERFLQVISART----------NHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 64
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
L K I++ A+KWV + N + ++ + +G+ ++ ++ L+
Sbjct: 65 GRFGKRLDAK----IAMGAQKWVDVFRY--NDTQSCIDALRAQGYQIVATTPHKDAYFLN 118
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ KK+ G EKEG+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 119 DFDISKKSAFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|189502158|ref|YP_001957875.1| hypothetical protein Aasi_0766 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497599|gb|ACE06146.1| hypothetical protein Aasi_0766 [Candidatus Amoebophilus asiaticus
5a2]
Length = 177
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEI 1829
L+ K +G+ ++ LEQT SIPL Y K LV G E GI + + D +EI
Sbjct: 89 LLQSLKTKGYLIVALEQTDESIPLQSYQINSNNKCALVFGNEVFGIQEEALAACDLALEI 148
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQ 1855
PQ G SLNV VS IA+WE T+ +
Sbjct: 149 PQHGTKHSLNVSVSMGIAIWELTKDK 174
>gi|402832581|ref|ZP_10881221.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. CM59]
gi|402276564|gb|EJU25670.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. CM59]
Length = 219
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
E F ++L R+ Q F + I ++ N + + RTCEVF + A+++
Sbjct: 21 ERFTEILSNRT----------QHFTVAIEDIFQMHNASAVIRTCEVF-----GVQTAHMI 65
Query: 1744 HDKQFQL----ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+K + I++ AEKWV ++ ++ K +G+ ++ ++PL ++
Sbjct: 66 EEKYGKRLDAKIAMGAEKWVTTHRYA--QVQPCIDTLKAQGYQIVATLPAPTAVPLQEFD 123
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K+ G E++G+ +I D + IP +G SLN+ VS AI L T + R
Sbjct: 124 ITPKSAFFFGTERDGLSQQVISQADVFLTIPMVGFTESLNISVSVAIILQYLTTKLR 180
>gi|429093902|ref|ZP_19156470.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter dublinensis 1210]
gi|426741146|emb|CCJ82583.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter dublinensis 1210]
Length = 353
Score = 63.2 bits (152), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 200 KAGEEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 256
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E+EGI
Sbjct: 257 HVEPITGDSFGDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQEREGISEAT 315
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ D + I G V SLNV V+ + L E+ RQ +
Sbjct: 316 LANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 352
>gi|406884257|gb|EKD31700.1| hypothetical protein ACD_77C00272G0013 [uncultured bacterium]
Length = 178
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 1771 HFLERK-------KHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIH 1821
H+ E+ K+EG+ +L +EQT NS L++ + K K V G E +G+ +I
Sbjct: 82 HYFEKTEDAILKLKNEGYKILSVEQTENSTMLNKLVLSKNEKYAFVFGNEVKGVAQEIAD 141
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+ D +EIPQ G S+NV VS I LWE R
Sbjct: 142 ISDLVVEIPQSGTKHSINVSVSIGIVLWEAAR 173
>gi|153007162|ref|YP_001381487.1| tRNA/rRNA methyltransferase SpoU [Anaeromyxobacter sp. Fw109-5]
gi|152030735|gb|ABS28503.1| tRNA/rRNA methyltransferase (SpoU) [Anaeromyxobacter sp. Fw109-5]
Length = 239
Score = 63.2 bits (152), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ + RTCE F L + + + + + IS A+KWV + +S L K
Sbjct: 57 NVNAVLRTCEAFGIQELHVIEGPMKPYDRNKKISQNADKWVDVRRW--SSTGECLAHLKA 114
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EGF++ + LD F K LV G E G+ + + + DA IP G V+SL
Sbjct: 115 EGFAIYATHLGEGARTLDALSFAGKVALVFGNEHRGVSDEAVALSDAVYVIPMHGFVQSL 174
Query: 1839 NVHVSGAIAL 1848
NV V+ AI++
Sbjct: 175 NVSVAAAISI 184
>gi|289548783|ref|YP_003473771.1| TrmH family RNA methyltransferase [Thermocrinis albus DSM 14484]
gi|289182400|gb|ADC89644.1| RNA methyltransferase, TrmH family, group 3 [Thermocrinis albus DSM
14484]
Length = 248
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 1681 KEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADA 1740
KE+ELF + L+ R F+LV + N+ L RTCEV G +
Sbjct: 79 KEEELFRKTLE------------RGSFLLVLDHLTDPQNVGNLLRTCEVLGGVGALLPKD 126
Query: 1741 NILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
Q +I ++ ++ V+S++ LE K G ++ +E+ I Q
Sbjct: 127 RSCPINQ-TVIKASSGAVFHLLLSRVSSLRRSLENFKRVGGWIVVVERGGKDI--RQVDI 183
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P LVLG E EG+ ++ + D + IP G + SLNV +GAIA+WE ++
Sbjct: 184 PLPCALVLGSEGEGVSKSVMEIADLIVSIPMGGKITSLNVSSAGAIAIWETIKKH 238
>gi|119484369|ref|ZP_01618986.1| spoU protein [Lyngbya sp. PCC 8106]
gi|119457843|gb|EAW38966.1| spoU protein [Lyngbya sp. PCC 8106]
Length = 229
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 1689 VLQARSLAMETIRASR-QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
V + RS +E + R +Q ++ I + N + R C+ F + D +I+ ++
Sbjct: 17 VTETRSQKIEAVVQQRTRQLTVILEDIYQPHNASACLRNCDSF-----GVQDVHIIENRN 71
Query: 1748 -FQL---ISVTAEKWVPIV---EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
F L +S+ + +W+ I E +N+ K LE+ K +G+ ++ I ++Q
Sbjct: 72 DFDLNREVSLGSHRWLTISRYNEPKINNTKICLEKLKSQGYKIVATTPHEEEITIEQISV 131
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+K L+ G E G+ D + D + IP +G S N+ VS A+ L+E T + R
Sbjct: 132 EEKLGLMFGTELNGLSDDAVSQADYLVRIPMVGFSESFNISVSVALCLYEITTKLR 187
>gi|318040451|ref|ZP_07972407.1| tRNA/rRNA methyltransferase [Synechococcus sp. CB0101]
Length = 231
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 11/153 (7%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL----HDKQFQLISVTAEKWVPIV 1762
+V +D+ NL+ + RTC+ + + +A+++ + F + ++KWVP+
Sbjct: 22 LTVVLEAVDKPHNLSAILRTCDA-----VGVLEAHVVSLPGRPRTFNKTAKGSQKWVPLH 76
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
P SI+ L K +GF + G + ++ F + ++G EK G+ + + M
Sbjct: 77 PHP--SIETCLNGLKEKGFRIYGTHLSVDARDYRDCDFTGPSCFLMGAEKWGMSDEALAM 134
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+D + IP G+V+SLNV V+ A L+E RQ+
Sbjct: 135 VDQPLFIPMTGMVQSLNVSVAAATLLFEALRQR 167
>gi|229496035|ref|ZP_04389759.1| SpoU rRNA methylase family protein [Porphyromonas endodontalis ATCC
35406]
gi|229317127|gb|EEN83036.1| SpoU rRNA methylase family protein [Porphyromonas endodontalis ATCC
35406]
Length = 182
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
++ + + L +E R+ + LV + + N+ L RT + F+ GL + L
Sbjct: 5 KIEEMQRLDVEQFRSEEKVPLTLVLDNVRSLNNVGSLFRTADAFRLEGLILCGITGL--P 62
Query: 1747 QFQLISVTA-EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKK 1803
+I TA + + S +E+ + +G+ + LEQ +S+ ++ P++
Sbjct: 63 PHPMIHKTALGAELSVAWEHAESTLEAVEQLRSKGYKIWALEQATDSLCPEESPLTPPER 122
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW----EYTR 1853
LV+G E G+ D+I +D CIEIPQ G SLNV VS IA++ EY R
Sbjct: 123 VALVVGNEVHGVADDVIACVDRCIEIPQYGTKHSLNVSVSAGIAIYSIVAEYLR 176
>gi|212640614|ref|YP_002317134.1| rRNA methylase [Anoxybacillus flavithermus WK1]
gi|212562094|gb|ACJ35149.1| rRNA methylase [Anoxybacillus flavithermus WK1]
Length = 238
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 1685 LFDQVLQARSLAMETIRASRQQFV-LVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
L++ +L +R M + + R +++ ++ +D N A + R+ E F I D +++
Sbjct: 26 LWEMILPSRLKRMYDVLSERTRYITILTEAVDDPHNQAAVLRSAEAF-----GIQDVHVV 80
Query: 1744 HD----KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
+ + ++ A+KW+ + + +SI+ + + G+ V +IPL+Q
Sbjct: 81 TGAAPFEPNKWVTRHADKWLNVHKH--SSIEQAIRHLQQNGYQVYASYLGEGTIPLEQID 138
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K TVL+ G E G+ + + + D IP G V+S N+ V+ AI+L+E T++ +
Sbjct: 139 VSKPTVLLFGNEHRGVSEEALALADGKFVIPMNGFVQSFNISVAAAISLYEITKRAK 195
>gi|410618247|ref|ZP_11329199.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola polaris LMG 21857]
gi|410162226|dbj|GAC33337.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola polaris LMG 21857]
Length = 182
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
E + S+ V+V + N+ R + F + + A + DK+F+ S K
Sbjct: 21 EYLSKSKIPLVVVLDNVTNSYNIGSFIRLADAFGIEKVIVCGALTISDKKFKKASRNEAK 80
Query: 1758 WVPI--VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
WV + + S++ L+ G+ + +E S+ Q +P VLVLG E++G+
Sbjct: 81 WVRVEYSDSTTASLQTLLD----AGYGIYSVELCQASVDYSQIAYPSPCVLVLGNERKGV 136
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ + I IP G+ SLNV +GAI L E Q R
Sbjct: 137 SEAALALSHQHIHIPMFGMGNSLNVATAGAIVLAECANQIR 177
>gi|258512124|ref|YP_003185558.1| tRNA/rRNA methyltransferase SpoU [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478850|gb|ACV59169.1| tRNA/rRNA methyltransferase (SpoU) [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 256
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIA 1738
E+E L D + R L + + R ++ VA +D N A + R+ E F +A+
Sbjct: 21 ERELWLADWLRPERLLRLREVLMRRTSYIAVAMEAVDDGHNQAAILRSAEAFGVQHVAVI 80
Query: 1739 DA-NILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQ 1797
+ H + ++ A KW+ + +P I ++ GF V + + P+D
Sbjct: 81 EGKQPFHPSKG--VTQGAHKWLTLQRMP--DIGRAIDALHARGFQVYATDLGEGAQPIDA 136
Query: 1798 YMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ T ++ G EK+G+ + D IP G V+S NV V+ AIAL+E TR+ R
Sbjct: 137 VDLARPTAILFGNEKDGVSPEARERADGRFYIPMAGFVQSFNVSVAAAIALYELTRRAR 195
>gi|448239732|ref|YP_007403790.1| putative RNA methyltransferase [Geobacillus sp. GHH01]
gi|445208574|gb|AGE24039.1| putative RNA methyltransferase [Geobacillus sp. GHH01]
Length = 247
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 1659 QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLV-ASLIDRI 1717
++ ++SF + ++ L E +++ +L R M + R +++ V +D
Sbjct: 2 EEREATSFL--EQLRQEGLITESTRPVWEMILPRRLRRMYEVLNERTRYITVLIEAVDDP 59
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFL 1773
N A + RT E F + D +I+ K +L++ A++W+ + P IK +
Sbjct: 60 HNQAAVLRTAEAF-----GVQDVHIVTGKAPFSPNRLVTRYADQWLTLHHKP--DIKTAI 112
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G+ V +IP+ + T L+ G E G+ + + + D IP G
Sbjct: 113 ADLKSQGYQVYASYLGEETIPVSDIDLSQPTALLFGNEHSGVSEEALRLADGTFVIPMYG 172
Query: 1834 VVRSLNVHVSGAIALWEYTRQQR 1856
V+S N+ V+ A+AL++ T + R
Sbjct: 173 FVQSFNISVAAALALYDVTERAR 195
>gi|154493345|ref|ZP_02032665.1| hypothetical protein PARMER_02682 [Parabacteroides merdae ATCC 43184]
gi|423346594|ref|ZP_17324282.1| hypothetical protein HMPREF1060_01954 [Parabacteroides merdae
CL03T12C32]
gi|423723149|ref|ZP_17697302.1| hypothetical protein HMPREF1078_01362 [Parabacteroides merdae
CL09T00C40]
gi|154086555|gb|EDN85600.1| RNA methyltransferase, TrmH family [Parabacteroides merdae ATCC
43184]
gi|409219745|gb|EKN12705.1| hypothetical protein HMPREF1060_01954 [Parabacteroides merdae
CL03T12C32]
gi|409241574|gb|EKN34342.1| hypothetical protein HMPREF1078_01362 [Parabacteroides merdae
CL09T00C40]
Length = 176
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+++ K +G++V +EQ S LD + K K +++G E +G+ ++ D CIEIP
Sbjct: 90 VDKLKQQGYTVCAVEQAEGSTMLDNLLLDKNKKYAVIMGNEVKGVQQCVVDNCDMCIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G SLNV V+ I +W++ +Q
Sbjct: 150 QYGTKHSLNVSVTTGIIIWDFFKQ 173
>gi|335423738|ref|ZP_08552758.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Salinisphaera
shabanensis E1L3A]
gi|334891201|gb|EGM29456.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Salinisphaera
shabanensis E1L3A]
Length = 252
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
VPV ++ + R + EGF +GL+ A+ D+ + P++ VLV G E++GI
Sbjct: 156 VPVTNLTRAIARLQEEGFWAVGLDGEADHSLYDEAL-PERLVLVAGGEEKGIRELTARQC 214
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
DA + IP G V SLNV V+ +AL+E RQ+R
Sbjct: 215 DALVSIPMAGDVESLNVSVATGVALFEALRQRR 247
>gi|406661782|ref|ZP_11069895.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Cecembia
lonarensis LW9]
gi|405554420|gb|EKB49516.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Cecembia
lonarensis LW9]
Length = 176
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKT---VLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K G+ + EQT S+PL + PKK L+ G E G+ II D IEIPQLG
Sbjct: 89 KENGYIICSFEQTDQSVPLHTFT-PKKERDYALIFGNEVFGVEESIIRESDQVIEIPQLG 147
Query: 1834 VVRSLNVHVSGAIALWEYT 1852
SLNV VS IA+W++T
Sbjct: 148 TKHSLNVSVSMGIAIWDFT 166
>gi|294675164|ref|YP_003575780.1| TrmH family RNA methyltransferase [Prevotella ruminicola 23]
gi|294471809|gb|ADE81198.1| RNA methyltransferase, TrmH family [Prevotella ruminicola 23]
Length = 176
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K EG+ V +EQ S L + + KK +VLG E +G+ ++I D C+EIP
Sbjct: 90 VETLKAEGYEVYSVEQAHGSTMLQNFTPINNKKYAVVLGNEVKGVHQEVIDASDGCLEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQ 1854
Q G S+NV V+G I +W + +
Sbjct: 150 QFGTKHSMNVSVTGGIIIWHFAKN 173
>gi|359403494|ref|ZP_09196398.1| TrmH family RNA methyltransferase [Spiroplasma melliferum KC3]
gi|438119407|ref|ZP_20871615.1| tRNA/rRNA methyltransferase [Spiroplasma melliferum IPMB4A]
gi|358832725|gb|EHK51829.1| TrmH family RNA methyltransferase [Spiroplasma melliferum KC3]
gi|434155420|gb|ELL44369.1| tRNA/rRNA methyltransferase [Spiroplasma melliferum IPMB4A]
Length = 244
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 1676 LLEIEKEDELFDQVLQARSLAMETIRA----SRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
L++ K L ++ + ++ ++ +I ++ F+LV I N + RTC++F
Sbjct: 61 LVQTSKHQSLVLEICKPQNYSLTSITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFN 120
Query: 1732 ASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ I D + + S A +VP+ V N++ + +E K +GF + T
Sbjct: 121 VDGVIILDKRQVDINATVAKTSAGAFNYVPVCRV--NNLTNAIEYLKKQGFWIYATSLTT 178
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ + + + L++G E GI ++ D I IP G + SLNV V+ AI +++
Sbjct: 179 KAQNVSELKYDTPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQ 238
Query: 1851 YTRQQR 1856
Q+
Sbjct: 239 IKMLQQ 244
>gi|261420869|ref|YP_003254551.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y412MC61]
gi|319768540|ref|YP_004134041.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y412MC52]
gi|261377326|gb|ACX80069.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y412MC61]
gi|300808463|gb|ADK35364.1| Rrm [Geobacillus stearothermophilus]
gi|317113406|gb|ADU95898.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y412MC52]
Length = 247
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 1659 QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLV-ASLIDRI 1717
++ ++SF + ++ L E +++ +L R M + R +++ V +D
Sbjct: 2 EEREATSFL--EQLRQEGLITESTRPVWEMILPRRLRRMYEVLNERTRYITVLIEAVDDP 59
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFL 1773
N A + RT E F + D +I+ K +L++ A++W+ + P IK +
Sbjct: 60 HNQAAVLRTAEAF-----GVQDVHIVTGKAPFSPNRLVTRYADQWLTLHHKP--DIKTAI 112
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G+ V +IP+ + T L+ G E G+ + + + D IP G
Sbjct: 113 ADLKSQGYQVYASYLGEGTIPVSDIDLSQPTALLFGNEHSGVSEEALRLADGTFVIPMYG 172
Query: 1834 VVRSLNVHVSGAIALWEYTRQQR 1856
V+S N+ V+ A+AL++ T + R
Sbjct: 173 FVQSFNISVAAALALYDVTERAR 195
>gi|373108706|ref|ZP_09522988.1| hypothetical protein HMPREF9712_00581 [Myroides odoratimimus CCUG
10230]
gi|423129623|ref|ZP_17117298.1| hypothetical protein HMPREF9714_00698 [Myroides odoratimimus CCUG
12901]
gi|423133287|ref|ZP_17120934.1| hypothetical protein HMPREF9715_00709 [Myroides odoratimimus CIP
101113]
gi|423328885|ref|ZP_17306692.1| hypothetical protein HMPREF9711_02266 [Myroides odoratimimus CCUG
3837]
gi|371646823|gb|EHO12334.1| hypothetical protein HMPREF9712_00581 [Myroides odoratimimus CCUG
10230]
gi|371648283|gb|EHO13773.1| hypothetical protein HMPREF9714_00698 [Myroides odoratimimus CCUG
12901]
gi|371649343|gb|EHO14824.1| hypothetical protein HMPREF9715_00709 [Myroides odoratimimus CIP
101113]
gi|404604116|gb|EKB03756.1| hypothetical protein HMPREF9711_02266 [Myroides odoratimimus CCUG
3837]
Length = 174
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 1697 METIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVT 1754
+E +AS + ++V + + N+ + RTC+ F + + +K+ ++
Sbjct: 14 VEEFKASEKTPIIVVLDDVRSLHNIGSVFRTCDAFLVEKVYLCGITATPPNKEIHKTALG 73
Query: 1755 AEKWVP------IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVL 1806
A + V +VEV ++ K G SV +EQ NS+ L+ + + K L
Sbjct: 74 ATETVEWEYAKDVVEV--------VKSLKESGVSVQSVEQVENSVMLNDFKVTEGAKYAL 125
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
V G E +G+ +++++ D IEIPQLG SLN+ VS I +W+ +Q
Sbjct: 126 VFGNEVKGVNQEVVNLSDGVIEIPQLGTKHSLNISVSAGIVIWDLFQQ 173
>gi|325955086|ref|YP_004238746.1| tRNA/rRNA methyltransferase SpoU [Weeksella virosa DSM 16922]
gi|323437704|gb|ADX68168.1| tRNA/rRNA methyltransferase (SpoU) [Weeksella virosa DSM 16922]
Length = 177
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIE 1828
+ +E+ + + +S++ +EQ NSI +Y +K +V+G E +G+ +II D C+E
Sbjct: 88 NLIEKLRKDNYSIVCIEQVENSISFPEYEVDPSRKYAIVMGNEVDGVQQEIIDKTDVCLE 147
Query: 1829 IPQLGVVRSLNVHVSGAIALWEY 1851
IPQ G SLNV V I LW++
Sbjct: 148 IPQSGTKHSLNVSVCTGIVLWKW 170
>gi|254478160|ref|ZP_05091542.1| RNA methyltransferase, TrmH family [Carboxydibrachium pacificum DSM
12653]
gi|214035889|gb|EEB76581.1| RNA methyltransferase, TrmH family [Carboxydibrachium pacificum DSM
12653]
Length = 198
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVT 1754
E ++ ++ FV+ + N + + RTC+ V + + A I + + +S+
Sbjct: 6 EVLQKRQKDFVVFVDDVTNEHNFSAILRTCDAVGVMRVYYFSEAKKGIEIN---EAVSMA 62
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
A +W+ +E + K E K+ E V+ +S + + K T+LV+G E +G
Sbjct: 63 ANRWL-FIERVYDREKAIKELKERENLQVVVTWLDESSKDFREIDYTKPTLLVVGNELKG 121
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ DI+++ D I IP +G+V+SLNV V+ I L+E RQ+
Sbjct: 122 VSEDILNLADERIVIPMMGMVQSLNVSVATGIILYEALRQR 162
>gi|404405520|ref|ZP_10997104.1| rRNA methylase [Alistipes sp. JC136]
Length = 245
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E + +++ + + N +AR+ E A GL N + I +A
Sbjct: 84 LERVPEDETPLIVLFDGVTDVRNFGAIARSAECAGAHGLVTPLKNSA-PVNAEAIRSSAG 142
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
I V SI++ L++ + EGF V+ + + + D F K TVLV+G E GI
Sbjct: 143 ALTVIPVCRVGSIRNTLKQLQTEGFQVVAATEKSRKLLYDAD-FRKPTVLVMGAEDTGIS 201
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ + D + IP +G + SLNV + A+ L+E RQ+
Sbjct: 202 KEVLKLCDEQLAIPLIGHIESLNVSAAAAVMLFEVVRQR 240
>gi|56421995|ref|YP_149313.1| rRNA methylase [Geobacillus kaustophilus HTA426]
gi|375010641|ref|YP_004984274.1| tRNA/rRNA methyltransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56381837|dbj|BAD77745.1| rRNA methylase [Geobacillus kaustophilus HTA426]
gi|359289490|gb|AEV21174.1| tRNA/rRNA methyltransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 247
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 1659 QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLV-ASLIDRI 1717
++ ++SF + ++ L E +++ +L R M + R +++ V +D
Sbjct: 2 EEREATSFL--EQLRQEGLITESTRPVWEMILPRRLRRMYEVLNERTRYITVLIEAVDDP 59
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFL 1773
N A + RT E F + D +I+ K +L++ A++W+ + P IK +
Sbjct: 60 HNQAAVLRTAEAF-----GVQDVHIVTGKAPFSPNRLVTRYADQWLTLHHKP--DIKTAI 112
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G+ V +IP+ + T L+ G E G+ + + + D IP G
Sbjct: 113 ADLKSQGYQVYASYLGEETIPVSDIDLSQPTALLFGNEHSGVSEEALRLADGTFVIPMYG 172
Query: 1834 VVRSLNVHVSGAIALWEYTRQQR 1856
V+S N+ V+ A+AL++ T + R
Sbjct: 173 FVQSFNISVAAALALYDVTERAR 195
>gi|371777507|ref|ZP_09483829.1| tRNA/rRNA methyltransferase (SpoU) [Anaerophaga sp. HS1]
Length = 178
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAEKWVP 1760
A + V+V + + N+ + RT + F+ + + + K+ ++ AE V
Sbjct: 20 APKTPIVVVLDNVRSLHNVGSIFRTSDAFRLQSIFLCGITSTPPHKEIHKTALGAEDAV- 78
Query: 1761 IVEVPVNSIKHF------LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREK 1812
S ++F LE K EG+ ++G+EQ SI L ++ K K ++ G E
Sbjct: 79 -------SWRYFDKTTKALELLKQEGYLLIGVEQVEGSISLPEFKPVKGDKYAVIFGNEV 131
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+G+ +I D C+EIPQ G S NV VS I LWE
Sbjct: 132 KGVDQKVIDQCDMCLEIPQYGTKHSFNVSVSAGIVLWE 169
>gi|440749056|ref|ZP_20928306.1| TRNA/rRNA methyltransferase [Mariniradius saccharolyticus AK6]
gi|436482758|gb|ELP38856.1| TRNA/rRNA methyltransferase [Mariniradius saccharolyticus AK6]
Length = 174
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAEKWV 1759
+ S+ +V + + N+ + RT + F + + K+ Q ++ A + V
Sbjct: 14 KESKSPLTIVLDNVRSLNNVGSVFRTADAFLVEKIYLCGITGTPPHKEIQKTALGATESV 73
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPV 1817
VP N++ +ER K +GF + EQ S L ++ KK LV G E G+
Sbjct: 74 DWEHVP-NTLDA-VERLKTQGFIICSFEQADKSKMLHEFTPENGKKYALVFGNEVFGVEQ 131
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D++ D IEIPQLG SLN+ VS IA+W++ +
Sbjct: 132 DVLKASDYVIEIPQLGTKHSLNIAVSAGIAVWDFVSK 168
>gi|317504477|ref|ZP_07962455.1| SpoU family RNA methylase [Prevotella salivae DSM 15606]
gi|315664420|gb|EFV04109.1| SpoU family RNA methylase [Prevotella salivae DSM 15606]
Length = 183
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 1774 ERKKHEGFSVLGLEQTANSIPL-----DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIE 1828
E + H+ F V +EQ SI L D+ K +V G E +G+ ++++M D C+E
Sbjct: 95 ELQSHDYF-VYSIEQVEGSIKLQDLTIDKTSQAKGYAVVFGNEVKGVKQEVVNMSDGCLE 153
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
IPQ G SLNV + I +WE+TR+ F
Sbjct: 154 IPQFGTKHSLNVSTTAGIVMWEFTRKLLF 182
>gi|374710367|ref|ZP_09714801.1| rRNA methylase [Sporolactobacillus inulinus CASD]
Length = 157
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
PN +ARTC SGL + L + W + +S+ F ER
Sbjct: 14 PNTGNIARTC-AGTNSGLHLIRPLGFSTDDKHLKRAGLDYWDSVDLHYYDSLDEFFERHP 72
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFP---KKTVLVLGREKEGIPVDII-HMLDACIEIPQLG 1833
+ ++ +T S P D + + K + GRE G+P D + + CI +P G
Sbjct: 73 QSEYYLV---ETDGSRPYDAFDYSDTSKDYYFIFGRETTGLPKDFVAKYQNRCIRLPMTG 129
Query: 1834 VVRSLNVHVSGAIALWEYTRQQRF 1857
+RSLN+ S AI L+E RQQRF
Sbjct: 130 AIRSLNLSNSAAIMLYEALRQQRF 153
>gi|340759389|ref|ZP_08695961.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium varium
ATCC 27725]
gi|251835585|gb|EES64125.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium varium
ATCC 27725]
Length = 235
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E I + VL+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 79 LEKIAPMEKSIVLILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRINETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
++V IV+V +I L + K + V G E S + +P +T LVLG E GI
Sbjct: 139 IEYVDIVKV--TNISEALLKLKKLDYWVYGAEGEG-SKDYSKEKYPSRTALVLGSEGNGI 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+ D I+IP G + SLNV V+G I L E +
Sbjct: 196 RKKVKENCDVLIKIPMHGKINSLNVSVAGGIILSEIVK 233
>gi|395803946|ref|ZP_10483187.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
gi|395433590|gb|EJF99542.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
Length = 220
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH--DKQFQLISVTAEKWVPIV 1762
+ F + + ++ N + + R+CEVF L + + DK+ I++ A+KWV I
Sbjct: 31 KHFTVAVEDVYQMHNTSAVMRSCEVFGIQELNVIEQRFGKRIDKE---IALGAQKWVDIN 87
Query: 1763 EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
+S+ L + +G+ ++ L+ + K + L G EKEG+ +I+
Sbjct: 88 RF--DSVSGCLSDLRSKGYQIIATTPHEKDCMLEDFDISKPSALFFGTEKEGLSKEIMDN 145
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++IP +G SLN+ VS AI + T + R
Sbjct: 146 ADGFLKIPMVGFTESLNISVSAAIIIQSLTNRLR 179
>gi|374384515|ref|ZP_09642035.1| hypothetical protein HMPREF9449_00421 [Odoribacter laneus YIT 12061]
gi|373228423|gb|EHP50732.1| hypothetical protein HMPREF9449_00421 [Odoribacter laneus YIT 12061]
Length = 186
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+AS+ +L+ + + N+ + RT + F+ + + +++ ++ AE V
Sbjct: 21 KASKMPVILLLDNVRSLNNVGSVFRTSDAFRIEKIYLCGITATPPNREIHKTALGAEDSV 80
Query: 1760 ---------PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY-MFP-KKTVLVL 1808
P+V N++K +G+ + +EQ NS+ L+ + + P +K L+
Sbjct: 81 AWEYSKETLPVV----NALKA-------QGYKIYAVEQAENSVSLENFSLLPGEKYALIF 129
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
G E +G+ ++I + CIEIPQ G S N+ VS I LWE
Sbjct: 130 GNEVKGVQQEVIEETEGCIEIPQYGTKHSFNISVSAGIVLWE 171
>gi|428780080|ref|YP_007171866.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
gi|428694359|gb|AFZ50509.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
Length = 236
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 1703 SRQQFVLVASLID--RIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVTAEK 1757
+R+Q L L D + N + + RTC+ VF A G+ + ++ F + +EK
Sbjct: 20 NRRQTDLTVLLEDVHKPHNFSAIIRTCDAVGVFAAHGV-YNEGDV---PAFSETAKGSEK 75
Query: 1758 WV-----PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
WV P +E VN +K + F++ T N++ + K + ++ G EK
Sbjct: 76 WVDIHTHPDLETAVNHLKA-------QNFTLYATHLTENALDYRTIDYTKPSCILFGAEK 128
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ + + ++D I IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 129 WGVSTEAMALVDQAIYIPMLGMVQSLNVSVAAAVILFEAQRQR 171
>gi|393780686|ref|ZP_10368894.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392608140|gb|EIW91002.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 220
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLA 1736
E+ E F QV+ AR+ F + + ++ N + + RTCEVF +A +
Sbjct: 15 EERKERFLQVISART----------NHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 64
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
L K I++ A+KWV + N + ++ + +G+ ++ ++ L+
Sbjct: 65 GRFGKRLDAK----IAMGAQKWVDVFRY--NDTQSCIDALRVQGYQIVATTPHKDAYFLN 118
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ KK+ G EKEG+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 119 DFDISKKSAFFFGTEKEGLSQQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|291300017|ref|YP_003511295.1| tRNA/rRNA methyltransferase SpoU [Stackebrandtia nassauensis DSM
44728]
gi|290569237|gb|ADD42202.1| tRNA/rRNA methyltransferase (SpoU) [Stackebrandtia nassauensis DSM
44728]
Length = 173
Score = 62.4 bits (150), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
NL L R+C+ A LA+ + + + + ++ + V V P + +L +++
Sbjct: 41 NLGTLLRSCDAVGAC-LAVPKWSWVPEALRRGNTLPGKACVHWVHDP----EGWLAQRRA 95
Query: 1779 EGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EG V+G+E ++ L D M ++T+ VLG E+ GIP +++ +LD +EIP +G S
Sbjct: 96 EGVRVVGVELAEDATRLADVPMARQRTIAVLGHERRGIPPEVLDLLDEVVEIPMIGAGAS 155
Query: 1838 LNVHVSGAIALWE 1850
LNV V+G++ L++
Sbjct: 156 LNVAVAGSLVLYK 168
>gi|410027898|ref|ZP_11277734.1| rRNA methylase [Marinilabilia sp. AK2]
Length = 181
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+++ K +G+ + LEQT S+PL ++ + K L+ G E G+ +I D IEIP
Sbjct: 90 IKKLKEDGYKICSLEQTDQSVPLHTFIPQQEEKYALIFGNEVFGVEEKLIKESDHVIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYT 1852
QLG SLN+ VS IA+W++T
Sbjct: 150 QLGTKHSLNISVSLGIAIWDFT 171
>gi|332877645|ref|ZP_08445388.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684394|gb|EGJ57248.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 181
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKTPLIVILDNVRSLNNVGSVFRTCDAFLVEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK---KTVLVLGREKEGIP 1816
E ++++ +ER K EG V+ +EQ ++ L+ + PK + ++ G E +G+
Sbjct: 79 AW-EYAEDTLQ-VVERLKAEGVCVISIEQAEKAVMLNDFQ-PKAHTQYAVIFGNEVKGVA 135
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+++ + D IEIPQ G SLNV VS I +WE T+
Sbjct: 136 QEVVSLSDGVIEIPQYGTKHSLNVSVSAGIVIWEMTK 172
>gi|398797847|ref|ZP_10557157.1| rRNA methylase [Pantoea sp. GM01]
gi|398101744|gb|EJL91950.1| rRNA methylase [Pantoea sp. GM01]
Length = 380
Score = 62.4 bits (150), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+AS + VL + NL G+ R+C F GL + DA++L TAE
Sbjct: 228 KASTKDCVLALEDVSNPHNLGGIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 284
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + S LE + G++++ + PL + P K VLVLG+E EG+
Sbjct: 285 HVQAISGESFADGLEAFRKAGYTIV-TTSSHEGTPLAKAELPAKMVLVLGQESEGLSDSA 343
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ I L E+ RQ
Sbjct: 344 FQQGDLSLSIGGTGNVESLNVSVATGILLAEWWRQ 378
>gi|417343091|ref|ZP_12123737.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|357955822|gb|EHJ81500.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 227
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+AS Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 74 QASDQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 133
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 134 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDYLPEAA 189
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 190 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 226
>gi|433447799|ref|ZP_20411177.1| spoU rRNA Methylase family protein [Anoxybacillus flavithermus
TNO-09.006]
gi|431999716|gb|ELK20630.1| spoU rRNA Methylase family protein [Anoxybacillus flavithermus
TNO-09.006]
Length = 238
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 1685 LFDQVLQARSLAMETIRASRQQFV-LVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
L++ +L +R M + + R +++ ++ +D N A + R+ E F + +
Sbjct: 26 LWEMILPSRLKRMYDVLSERTRYITILTEAVDDPHNQAAVLRSAEAFGIQDVHVVTGTAP 85
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
+ + ++ A+KW+ + + +SI+ + + G+ V +IPL+Q K
Sbjct: 86 FEPN-KWVTRHADKWLTVHKH--SSIERAIHHLQQNGYQVYASYLGEGTIPLEQIDVAKP 142
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
TVL+ G E G+ + + + D IP G V+S N+ V+ AI+L++ T++ +
Sbjct: 143 TVLLFGNEHRGVSEEALALADGKFVIPMNGFVQSFNISVAAAISLYDVTKRAK 195
>gi|429081777|ref|ZP_19144877.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter condimenti 1330]
gi|426549669|emb|CCJ70918.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter condimenti 1330]
Length = 351
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+A + VL + NL + R+C F G+ + DA++L + TAE
Sbjct: 197 TQAGEEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLL---ESGAAVRTAEGGA 253
Query: 1760 PIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 254 EHVEPITGDSFSEALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEA 312
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ D + I G V SLNV V+ + L E+ RQ +
Sbjct: 313 TLANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 350
>gi|297531654|ref|YP_003672929.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. C56-T3]
gi|297254906|gb|ADI28352.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. C56-T3]
Length = 247
Score = 62.4 bits (150), Expect = 3e-06, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 1659 QDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLV-ASLIDRI 1717
++ ++SF + ++ L E +++ +L R M + R +++ V +D
Sbjct: 2 EEREATSFL--EQLRQEGLITESTRPVWEMILPRRLRRMYEVLNERTRYITVLIEAVDDP 59
Query: 1718 PNLAGLARTCEVFKASGLAIADANILHDKQ----FQLISVTAEKWVPIVEVPVNSIKHFL 1773
N A + RT E F + D +I+ K +L++ A++W+ + P IK +
Sbjct: 60 HNQAAVLRTAEAF-----GVQDVHIVTGKAPFSPNRLVTRYADQWLTLHHKP--DIKTAI 112
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G+ V +IP+ + T L+ G E G+ + + + D IP G
Sbjct: 113 ADLKSQGYQVYASYFGEGTIPVSDIDLSQPTALLFGNEHSGVSEEALRLADGTFVIPMYG 172
Query: 1834 VVRSLNVHVSGAIALWEYTRQQR 1856
V+S N+ V+ A+AL++ T + R
Sbjct: 173 FVQSFNISVAAALALYDVTERAR 195
>gi|354724728|ref|ZP_09038943.1| putative methyltransferase [Enterobacter mori LMG 25706]
Length = 376
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 241 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDALEQFR 297
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 298 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 356
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 357 LNVSVATGVLLAEWWRQNK 375
>gi|399024430|ref|ZP_10726467.1| rRNA methylase [Chryseobacterium sp. CF314]
gi|398080420|gb|EJL71234.1| rRNA methylase [Chryseobacterium sp. CF314]
Length = 223
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 1719 NLAGLARTCEVFKASG----LAIADANILHDKQFQLISVT--AEKWVPIVEVPVNSIKHF 1772
N A + R+ E A G +A+ + N+ + ++VT AE WV + ++P N
Sbjct: 46 NAAAIVRSVE---ACGFHKVVALEEENVFNPN----LTVTKGAETWVEVEKMPKNI--SS 96
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQL 1832
L++ K++G+ +L + N++ L Y + LV G E EG+ ++I D + IP
Sbjct: 97 LQKIKNQGYKILAVSPEKNAVMLPDYQITEPIALVFGTELEGVSEEVIDFADETLAIPMY 156
Query: 1833 GVVRSLNVHVSGAIALWEYTRQ 1854
G +S NV V+ I ++E ++
Sbjct: 157 GFTKSFNVSVAAGICMYELKQK 178
>gi|417791627|ref|ZP_12439066.1| putative methyltransferase, partial [Cronobacter sakazakii E899]
gi|333954260|gb|EGL72123.1| putative methyltransferase [Cronobacter sakazakii E899]
Length = 215
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L + TAE
Sbjct: 62 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLL---ESGAAVRTAEGGAE 118
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 119 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 177
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 178 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 214
>gi|315223488|ref|ZP_07865344.1| tRNA guanosine-2'-O-methyltransferase [Capnocytophaga ochracea F0287]
gi|420160475|ref|ZP_14667258.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str. Holt
25]
gi|314946523|gb|EFS98515.1| tRNA guanosine-2'-O-methyltransferase [Capnocytophaga ochracea F0287]
gi|394760669|gb|EJF43183.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str. Holt
25]
Length = 220
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLA 1736
E+ E F QV+ AR+ F + + ++ N + + RTCEVF +A +
Sbjct: 15 EERKERFLQVISART----------NHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 64
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+ K I++ A+KWV + N + ++ + +G+ ++ ++ L+
Sbjct: 65 GRFGKRIDAK----IAMGAQKWVDVFRY--NDTQSCIDALRAQGYQIVATTPHKDAYFLN 118
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ KK+ G EKEG+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 119 DFDISKKSAFFFGTEKEGLSQQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|146312707|ref|YP_001177781.1| methyltransferase [Enterobacter sp. 638]
gi|145319583|gb|ABP61730.1| tRNA/rRNA methyltransferase (SpoU) [Enterobacter sp. 638]
Length = 365
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIV-EVPVNSIKHFLERK 1776
NL + R+C F G+ + DA I+ + AE PI E +++I+ F
Sbjct: 230 NLGAMMRSCAHFGVKGVLLQDAAIVESGAAIRTAEGGAEHVQPITGESVLDAIEEF---- 285
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+ G+S++ + PL Q P+K VLVLG+E++G+ + D + I G V
Sbjct: 286 RKAGYSIV-TTSSHTGTPLFQATLPRKMVLVLGQERDGLSDAALSTADLSVSIEGTGKVE 344
Query: 1837 SLNVHVSGAIALWEYTRQQR 1856
SLNV V+ + L E+ RQ +
Sbjct: 345 SLNVSVATGVLLAEWWRQNK 364
>gi|365960229|ref|YP_004941796.1| putative tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365736910|gb|AEW86003.1| putative tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 225
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 1689 VLQARSLAMETIRASR-QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
+ + R + + A+R + F +V + ++ N + + R+CEVF L + + K
Sbjct: 18 ITKNRKEGFKKVLANRTKHFTVVCEDVYQLHNTSAVMRSCEVFGIQELNVVEQR-FGKKI 76
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ I++ AEKWV I N + + + G+ ++ L+ + K + +
Sbjct: 77 DKEIALGAEKWVDIKRFSNN--QDCINNLRTRGYQIIATTPHEKDSMLEDFDISKPSAIY 134
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G E+ GI ++I D ++IP +G SLN+ VS AI + T + R
Sbjct: 135 FGTERLGISDEVIKNADGFLKIPMVGFTESLNISVSAAIIIQSLTNRLR 183
>gi|401677656|ref|ZP_10809630.1| tRNA/rRNA methyltransferase SpoU [Enterobacter sp. SST3]
gi|400215179|gb|EJO46091.1| tRNA/rRNA methyltransferase SpoU [Enterobacter sp. SST3]
Length = 366
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 231 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDALEQFR 287
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 288 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 346
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 347 LNVSVATGVLLAEWWRQNK 365
>gi|401764800|ref|YP_006579807.1| methyltransferase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176334|gb|AFP71183.1| methyltransferase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 376
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 241 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDALEQFR 297
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 298 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 356
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 357 LNVSVATGVLLAEWWRQNK 375
>gi|163788241|ref|ZP_02182687.1| RNA methyltransferase, TrmH family protein [Flavobacteriales
bacterium ALC-1]
gi|159876561|gb|EDP70619.1| RNA methyltransferase, TrmH family protein [Flavobacteriales
bacterium ALC-1]
Length = 167
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + LV I PN+ L R + F L ++ K+ S + EK+V
Sbjct: 11 KKQKHPITLVCDNISNAPNIGSLFRIADAFGIEELIFCGKDVSLGKRMTKTSRSTEKYV- 69
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVD 1818
+IK + R K + ++ LE T NS L Q+ K ++LG E G+ D
Sbjct: 70 -THKIEENIKDVIARLKTKNHFLIALEITGNSQDLSQFTLNTKQPIAVILGDENFGVSDD 128
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
II++ DA I I G S+NV + +I L+E T+Q
Sbjct: 129 IINLCDAVIHINMYGNNSSMNVVQATSITLYELTKQ 164
>gi|429751552|ref|ZP_19284465.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429180497|gb|EKY21717.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 220
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLAIADANILHDKQFQLISV 1753
+E I F + + ++ N + + RTCEVF +A + L K I++
Sbjct: 22 LEIIAQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFGKRLDAK----IAM 77
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A+KWV + N + ++ + +G+ ++ ++ L+ + KK+ G EKE
Sbjct: 78 GAQKWVDVFRY--NDTQSCIDTLRAQGYQIVATTPHKDAYFLNDFDITKKSAFFFGTEKE 135
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 136 GLSAQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|334125216|ref|ZP_08499208.1| RNA methyltransferase [Enterobacter hormaechei ATCC 49162]
gi|333387381|gb|EGK58579.1| RNA methyltransferase [Enterobacter hormaechei ATCC 49162]
Length = 361
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 226 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDALEQFR 282
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 283 KAGYTIVTTSSRA-ATPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 341
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 342 LNVSVATGVLLAEWWRQNK 360
>gi|336317161|ref|ZP_08572028.1| rRNA methylase [Rheinheimera sp. A13L]
gi|335878461|gb|EGM76393.1| rRNA methylase [Rheinheimera sp. A13L]
Length = 294
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHF 1772
I NL +AR+C F SG+ + D ++L + TAE V VE + +++
Sbjct: 155 IGNAHNLGAIARSCAHFGISGIVMKDPDLL---AHGAAARTAEGGVEFVEGLSCDNLPLA 211
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQL 1832
L+ K G++++ + + L P K V+V G E G+ + D ++IP
Sbjct: 212 LQLCKQAGYTLV-TTSSHGGVSLYSSQLPAKVVIVFGEEMFGVSQSVAKSADIALQIPGT 270
Query: 1833 GVVRSLNVHVSGAIALWEYTRQQR 1856
G V SLNV V+ ++ L E+ RQQ+
Sbjct: 271 GKVESLNVSVAASLILGEWYRQQQ 294
>gi|332880032|ref|ZP_08447716.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682028|gb|EGJ54941.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 217
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLAIADANILHDKQFQLISVT 1754
E I F + + ++ N + + RTCEVF +A + L K I++
Sbjct: 20 EIIGQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRFGKRLDAK----IAMG 75
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
A+KWV + ++ +H ++ + +G+ ++ ++ L+ + KK+ G EKEG
Sbjct: 76 AQKWVDVFRY--DNTQHCIDSLRAKGYQIVATTPHKDAYFLNDFDISKKSAFFFGTEKEG 133
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 134 LSEQVLSQADTFLKIPMVGFTESLNISVAVAIVLQQLTDRLR 175
>gi|257064637|ref|YP_003144309.1| rRNA methylase , group 3 [Slackia heliotrinireducens DSM 20476]
gi|256792290|gb|ACV22960.1| rRNA methylase, putative, group 3 [Slackia heliotrinireducens DSM
20476]
Length = 256
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV-PIVEVP 1765
V+V I NL +AR+ EV ASGL I + + Q+ + T + I +P
Sbjct: 101 LVIVLDHITDAGNLGAIARSAEVVGASGLIIPN-----KRSAQVTAATYKSSAGAINHLP 155
Query: 1766 VNSIKHF---LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM 1822
V + + L+R K GF V G + A + ++ K LV+G E+EGI +
Sbjct: 156 VAQVANLTGALDRLKKAGFWVAGASEHAQHTVWEAPLY-GKIALVMGNEQEGISRLTLES 214
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D +++PQ G+V SLNV + ++E+ RQ
Sbjct: 215 CDFLVKLPQAGMVGSLNVAQASTAVMYEWLRQ 246
>gi|113953546|ref|YP_729908.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
gi|113880897|gb|ABI45855.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
Length = 229
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 1698 ETIRASRQQ----FVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQL 1750
E +RA Q ++ +D+ NL+ + R+C+ V +A ++++ + ++ Q
Sbjct: 9 ERLRAVLNQRMANLTVLVEHVDKPHNLSAILRSCDAVGVLEAHAVSLSGRSRTYNSTAQ- 67
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
+++WVP+ P +I+ ++ K GF + G + +++ F T VLG
Sbjct: 68 ---GSQRWVPLHSHP--NIEEAVKTLKDRGFHLYGTNLSVDALDYRDCDFTGPTAFVLGA 122
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EK G+ + ++D + IP G+V+SLNV V+ A L+E RQ+
Sbjct: 123 EKWGLSENATKLMDTDVFIPMRGMVQSLNVSVATATLLFEALRQR 167
>gi|429087733|ref|ZP_19150465.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter universalis NCTC 9529]
gi|426507536|emb|CCK15577.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter universalis NCTC 9529]
Length = 355
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 202 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 258
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 259 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 317
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ D + I G V SLNV V+ + L E+ RQ +
Sbjct: 318 LANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 354
>gi|304383767|ref|ZP_07366226.1| SpoU family RNA methylase [Prevotella marshii DSM 16973]
gi|304335291|gb|EFM01562.1| SpoU family RNA methylase [Prevotella marshii DSM 16973]
Length = 181
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 1688 QVLQARSLAMETIR-ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI---- 1742
+ ++ L +E + A + V+V + + N+ + R+C+ F+ S + +
Sbjct: 6 RTIEMHRLTVEEFKEAEKLPLVVVLDDVRSLYNVGSVFRSCDAFRISAIYLCGITACPPH 65
Query: 1743 --LHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+H A ++ E V +++ +GF V +EQ S L
Sbjct: 66 AEIHKTALGAEESIAWRYFATAEEAVRNLQT-------KGFFVYSIEQAEGSTKLHHLTL 118
Query: 1801 PK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ K +VLG E +G+ ++ + D C+EIPQ G SLNV V+ + +WE+ +Q
Sbjct: 119 ERRQKYAVVLGNEVKGVHQSVVDLSDGCLEIPQWGTKHSLNVSVAAGMVVWEFAKQ 174
>gi|428210610|ref|YP_007083754.1| rRNA methylase [Oscillatoria acuminata PCC 6304]
gi|427998991|gb|AFY79834.1| rRNA methylase, putative, group 3 [Oscillatoria acuminata PCC 6304]
Length = 357
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 1695 LAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISV 1753
L ++ S + +LV I+ NL + RT E A GL I + ++
Sbjct: 173 LIANALKVSDRPVLLVGDGINDPHNLGAMIRTAEAIGAQGLVIPQRRAVGITSTVMKVAA 232
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A ++ P+ V +N + LE K GF + G A S + F + TVLV+G E E
Sbjct: 233 GALEFFPVARV-IN-LSRALEELKDAGFWIYGTAANAPSA-VSSIEFTRPTVLVVGSEGE 289
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ + D I IP G + SLNV V+ +AL+E RQ+
Sbjct: 290 GLNLLTQRHCDELISIPLQGKIPSLNVSVATGMALYEIFRQR 331
>gi|255038542|ref|YP_003089163.1| tRNA/rRNA methyltransferase SpoU [Dyadobacter fermentans DSM 18053]
gi|254951298|gb|ACT95998.1| tRNA/rRNA methyltransferase (SpoU) [Dyadobacter fermentans DSM 18053]
Length = 178
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 1695 LAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD-ANILHDKQFQLIS 1752
++++ R S + V+V I + N+ RT + F+A + + ++ +
Sbjct: 12 MSVDEFRESEKFPLVIVLDNIRSLNNIGSFFRTADAFRAEKIVLCGYTQQPPHREITRSA 71
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGR 1810
+ AE V + P S + K +G++V +EQ S+ L + V G
Sbjct: 72 LGAEMAVAWEKNP--SAVDAVNALKSQGYNVWCVEQAEGSVLLQDFEPAAGDPYAFVFGN 129
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E EG+ ++I D C+EIPQ G S NV VS I LW+Y R++
Sbjct: 130 EVEGVADEVIAASDGCLEIPQFGTKHSFNVSVSAGIVLWDYIRKK 174
>gi|440799464|gb|ELR20509.1| hypothetical protein ACA1_098860 [Acanthamoeba castellanii str.
Neff]
Length = 1178
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 109/279 (39%), Gaps = 62/279 (22%)
Query: 353 FDIRAVREFWEEIKRGLVDEEGLVRKQSLHILKAVLQIRGENQGHSGVSDMRSQGKNSTA 412
FD+R +FW ++ G +G VRK + +LK VL + + D +
Sbjct: 305 FDLRTDDQFWHFLQVGFYSSDGGVRKLANLLLKRVLAHTRQAADPATPLDFK-------- 356
Query: 413 RGMTKRDLWAVKEAKSLGVGKLCYSTDLALKQGQQQWEAFILLYEMLEEYSTHLVEAAWN 472
TK W VK S D K ++WE F LL E LEEY+ HLV W
Sbjct: 357 ---TKYFSWPVK------------SND---KAWAKRWETFFLLQESLEEYNYHLVAPLWP 398
Query: 473 HQITLLLQFSLPHDNLPGSTGRAHQNWIKPSGEIFD--WLSVLWERGFCHGNP-QVRYMI 529
Q+ L Q S G D W L ER H NP ++ +
Sbjct: 399 -QLAALFQASR-------------------EGTAMDLSWAQALLERALRHENPITQKHAL 438
Query: 530 MQSFLGIEWKSYENCAKSVPESFLLGPFMEGLNDPVHHKDFGTKGVYSSRTIERAASFLH 589
+ E+ A++V ESF+LG ME DP +G S T +FL
Sbjct: 439 LHVLHNAEY------ARNVTESFVLGTVMEVCCDPSLF-----RGSLSRVTDRLLVAFLG 487
Query: 590 QYASFL-DTRKQIAFL-SNLASVAKQQSFGRVGLMALAE 626
+ L D + Q+ F+ S L ++A + F L A E
Sbjct: 488 AFFDALPDHQAQVGFVRSLLGAIAGHKPFASGALAAYFE 526
>gi|373501421|ref|ZP_09591778.1| hypothetical protein HMPREF9140_01896 [Prevotella micans F0438]
gi|371949077|gb|EHO66951.1| hypothetical protein HMPREF9140_01896 [Prevotella micans F0438]
Length = 176
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 32/184 (17%)
Query: 1688 QVLQARSLAMETIR-ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
+ ++ L++E R A + V+V + + N+ + R+C+ F+ K
Sbjct: 5 RTIEMNRLSIEEFREAPKLPLVVVLDNVRSLYNIGSIFRSCDAFRV-------------K 51
Query: 1747 QFQLISVTAEKWVPIVEVPVNSI--------KHF------LERKKHEGFSVLGLEQTANS 1792
L +TA P E+ ++ K+F +++ + E + + +EQ NS
Sbjct: 52 SVYLCGITATP--PNAEIHKTALGGEDSVEWKYFEKTEDVIQQLRQEDYFIYSIEQVENS 109
Query: 1793 IPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
L K +V G E +G+ +++ + + C+EIPQ G SLNV V+ I +WE
Sbjct: 110 TRLQNLSLDATKTYAVVFGNEVKGVSQNVVDLSNDCLEIPQFGTKHSLNVSVAAGIVIWE 169
Query: 1851 YTRQ 1854
+ RQ
Sbjct: 170 FARQ 173
>gi|292489188|ref|YP_003532075.1| tRNA/rRNA methyltransferase [Erwinia amylovora CFBP1430]
gi|428786148|ref|ZP_19003631.1| putative tRNA/rRNA methyltransferase [Erwinia amylovora ACW56400]
gi|291554622|emb|CBA22290.1| putative tRNA/rRNA methyltransferase [Erwinia amylovora CFBP1430]
gi|426275543|gb|EKV53278.1| putative tRNA/rRNA methyltransferase [Erwinia amylovora ACW56400]
Length = 344
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ R+C F A GL + DA++L + TAE V+ + S L+ +
Sbjct: 210 NLGGIMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAEHVQAISGESFAAGLDAFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + +PL P + VLVLG+E++G+ D + I G V S
Sbjct: 267 QAGYTIV-TTSSHQGVPLSSAELPARMVLVLGQERDGLSDSSFQQGDLSVSIGGTGNVES 325
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV V+ + L E+ RQ
Sbjct: 326 LNVSVATGVLLAEWWRQ 342
>gi|423684839|ref|ZP_17659647.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
gi|371495886|gb|EHN71480.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
Length = 229
Score = 62.0 bits (149), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI---SVTAE 1756
++A + L + + N++ + RT + A+G+ A + +Q Q++ S A
Sbjct: 13 LKARQTDLTLCLEEVHKANNVSAIVRTAD---ATGIHKIHA-VWPTEQMQMLGHTSAGAR 68
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
WV VE N I+ K +G +L + ++ + + K T ++LG EK GI
Sbjct: 69 NWVD-VETHKN-IEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGIS 126
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ M D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 127 KKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|397164518|ref|ZP_10487973.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Enterobacter radicincitans DSM 16656]
gi|396093666|gb|EJI91221.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Enterobacter radicincitans DSM 16656]
Length = 365
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A + VL + NL + R+C F G+ + DA ++ TAE
Sbjct: 213 AGEEDCVLALEDVGNPHNLGAIMRSCAHFGVKGVVLQDAGVIESGA---AVRTAEGGAEH 269
Query: 1762 VE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V+ + +S LE + G++++ + N PL + PKK VLVLG+E++G+ +
Sbjct: 270 VQAITGDSFADALEDFRQAGYALV-TTSSHNGTPLFKATLPKKMVLVLGQERDGLSDATL 328
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 329 SRADLSVSIEGTGNVESLNVSVATGVLLAEWWRQNK 364
>gi|260598962|ref|YP_003211533.1| methyltransferase, partial [Cronobacter turicensis z3032]
gi|260218139|emb|CBA32949.1| Uncharacterized tRNA/rRNA methyltransferase yfiF [Cronobacter
turicensis z3032]
Length = 257
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L + TAE
Sbjct: 104 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLL---ESGAAVRTAEGGAE 160
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 161 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 219
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 220 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 256
>gi|298247217|ref|ZP_06971022.1| tRNA/rRNA methyltransferase (SpoU) [Ktedonobacter racemifer DSM
44963]
gi|297549876|gb|EFH83742.1| tRNA/rRNA methyltransferase (SpoU) [Ktedonobacter racemifer DSM
44963]
Length = 291
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANI-LHDKQFQLISVTAEKWVPIVEVPVN-SIKHFLE-- 1774
NL + R+C+ +A GL + + L+D + S + +P V +P I+ +L+
Sbjct: 133 NLGTIIRSCDALEAHGLILTGHAVDLYDPETISASTGSFFALPTVRLPSQRDIEPWLQSA 192
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+KK ++G ++ A + Q+ F TVL++G E G+ + DA ++IP +G
Sbjct: 193 KKKLGALQIIGTDEKAEQ-EISQHDFTVPTVLIVGNETWGMSAAYKELCDAVVQIPLVGS 251
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
SLNV + +I L+E +RQ+R
Sbjct: 252 ASSLNVACATSICLYEVSRQRRL 274
>gi|213962171|ref|ZP_03390435.1| SpoU rRNA methylase family protein [Capnocytophaga sputigena Capno]
gi|213955177|gb|EEB66495.1| SpoU rRNA methylase family protein [Capnocytophaga sputigena Capno]
Length = 180
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKAS-----GLAIADANI-LHDKQFQLISVT 1754
+A + +++ + + N+ + RTC+ F G+ N +H
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREK 1812
A ++V N++ +E+ K +G ++ +EQ NS L+ + +K ++ G E
Sbjct: 79 AWEYVE------NTL-SVVEKLKEQGVYIISIEQAENSTMLNDFQSNGKQKYAIIFGNEV 131
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ +++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 132 KGVEQEVVSASDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|441506911|ref|ZP_20988839.1| putative RNA methyltransferase [Gordonia aichiensis NBRC 108223]
gi|441448976|dbj|GAC46800.1| putative RNA methyltransferase [Gordonia aichiensis NBRC 108223]
Length = 225
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 6/163 (3%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
R +E I A R F + N+ + RT F AS + I + + +
Sbjct: 62 REAIVEDIDARRHPFHVAIENFAHDANIGTVVRTANAFAASAVHIVGRRRWNRRG----A 117
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
+ +++ ++ +S+ + + EG +V+ ++ T S+PL+ P+ +L+ G+E
Sbjct: 118 MVTDRYQHLLHH--DSVSELMAWARGEGLAVVAVDNTPGSVPLETADLPRACILLFGQEG 175
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ D D + I Q G RS+N V+ IA+ + RQ
Sbjct: 176 PGVSDDAQAQADLTVSIAQFGSTRSINAGVAAGIAMHAWIRQH 218
>gi|313205776|ref|YP_004044953.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485093|ref|YP_005394005.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312445092|gb|ADQ81447.1| tRNA/rRNA methyltransferase (SpoU) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459778|gb|AFD55462.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 228
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N A + R+ E + + + + D ++ A+ WV + ++P N K LE+ K
Sbjct: 54 NAAAIVRSVEACAFHKVVALEKDNIFDPNLS-VTKGADTWVEVEKMPRN--KASLEKIKE 110
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
G+ ++ + N+ L Y K LV G E EG+ +++ D + IP G +S
Sbjct: 111 RGYKIVAVSPENNATMLPDYKVEKPIALVFGTEWEGVSDELLDFADETLAIPMYGFTKSF 170
Query: 1839 NVHVSGAIALWEYTRQ 1854
NV V+ AI ++E ++
Sbjct: 171 NVSVAAAICMYELKQK 186
>gi|160888065|ref|ZP_02069068.1| hypothetical protein BACUNI_00473 [Bacteroides uniformis ATCC 8492]
gi|156862376|gb|EDO55807.1| RNA methyltransferase, TrmH family [Bacteroides uniformis ATCC 8492]
Length = 175
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ V +EQ S+ LD+ + KK +V+G E +G+ ++I CIEIPQ G
Sbjct: 94 KSEGYIVYSVEQAEGSVMLDELVLNKTKKYAVVMGNEVKGVQQEVIDHSHGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ I +W+ ++ R
Sbjct: 154 KHSLNVSVTAGIVIWDLFKKLR 175
>gi|288555214|ref|YP_003427149.1| rRNA methylase [Bacillus pseudofirmus OF4]
gi|288546374|gb|ADC50257.1| rRNA methylase [Bacillus pseudofirmus OF4]
Length = 157
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 1717 IP-NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPV-NSIKHFLE 1774
IP N +ARTC S I D + L + W P V++ +S++ +
Sbjct: 12 IPANTGNIARTCAGTNTSLHLIRPLGFSTDDKM-LKRAGCDYW-PSVDIHYYDSLEELFD 69
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM-LDACIEIPQLG 1833
K F + T N D K V GRE GIP DII LD C IPQ
Sbjct: 70 TYKEGEFYFIETVGTKNFSEFDYSDDNKDHFFVFGRETTGIPQDIIDRNLDRCFRIPQTD 129
Query: 1834 VVRSLNVHVSGAIALWEYTRQQRF 1857
VRSLNV + AI ++E RQQ F
Sbjct: 130 KVRSLNVSNTAAIVIYEAIRQQGF 153
>gi|419764282|ref|ZP_14290522.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|397742865|gb|EJK90083.1| putative methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
Length = 141
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S L++ +
Sbjct: 6 NLGAIMRSCAHFGVKGVVVQDAGVLESGAAIRTAEGGAEHVEPITG---DSFIDTLDQFR 62
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + N PL + PKK VL LG+E++G+ I D + I G V S
Sbjct: 63 KAGYAIVS-TSSHNGTPLFKAELPKKMVLALGQERDGLSDAAISSADLSVAIDGTGNVES 121
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 122 LNVSVATGVLLAEWWRQNK 140
>gi|183221427|ref|YP_001839423.1| putative tRNA guanosine-2'-O-methyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911515|ref|YP_001963070.1| rRNA methylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167776191|gb|ABZ94492.1| rRNA methylase [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167779849|gb|ABZ98147.1| Putative tRNA guanosine-2'-O-methyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 285
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
KK G V+G + + +S L + +L+LG EK+G+ V + + D ++IP LGVV
Sbjct: 206 KKRNGLVVVGSDSSGDS-NLREVSIQTPILLILGNEKKGMSVQLQSICDRIVKIPMLGVV 264
Query: 1836 RSLNVHVSGAIALWEYTRQQ 1855
SLNV +G+I LWE TR +
Sbjct: 265 NSLNVSCAGSILLWEVTRNR 284
>gi|319900584|ref|YP_004160312.1| tRNA/rRNA methyltransferase (SpoU) [Bacteroides helcogenes P 36-108]
gi|319415615|gb|ADV42726.1| tRNA/rRNA methyltransferase (SpoU) [Bacteroides helcogenes P 36-108]
Length = 180
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ V +EQ SI LD+ KK +V+G E +G+ ++I CIEIPQ G
Sbjct: 98 KKEGYVVYSVEQAEGSIMLDELALDKEKKYAVVMGNEVKGVRQEVIDHSHGCIEIPQYGT 157
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ I +W+ ++ R
Sbjct: 158 KHSLNVSVTAGIVIWDLFKKLR 179
>gi|384099155|ref|ZP_10000255.1| putative tRNA/rRNA methyltransferase [Imtechella halotolerans K1]
gi|383833579|gb|EID73030.1| putative tRNA/rRNA methyltransferase [Imtechella halotolerans K1]
Length = 216
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL-----I 1751
+E + F + + + N + + R+CEVF + A+++ +K+F I
Sbjct: 23 LEILSRRTNHFTVAIEDVYQAHNTSAVIRSCEVF-----GVQQAHLV-EKRFGKRLDANI 76
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
++ A+KWV + N + ++ + +G+ ++ +S LD++ +K+ G E
Sbjct: 77 AMGAQKWVDVYRY--NDTQSCIDSLRAKGYKIIATTPHDDSCMLDEFDISQKSAFFFGTE 134
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ G+ D++ D ++IP G SLN+ VS AI L + T + R
Sbjct: 135 RLGLSQDVMQQADGFLKIPMEGFTESLNISVSAAIILQDITTRLR 179
>gi|288549949|ref|ZP_06390860.1| putative tRNA/rRNA methyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288317311|gb|EFC56249.1| putative tRNA/rRNA methyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 199
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 64 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDAIEQFR 120
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 121 KAGYSIVTTSSHA-ATPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 179
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 180 LNVSVATGVLLAEWWRQNK 198
>gi|119487909|ref|ZP_01621406.1| tRNA/rRNA methyltransferase [Lyngbya sp. PCC 8106]
gi|119455485|gb|EAW36623.1| tRNA/rRNA methyltransferase [Lyngbya sp. PCC 8106]
Length = 295
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVP 1760
AS + +++A + NL + RT E SGL + + ++ A + P
Sbjct: 140 ASSEPVIVMAEGLTDPHNLGAIIRTSEAIGVSGLILPQRRAVGITSTVMKVAAGALETFP 199
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
+ V VN + LE K GF + G TA+ PL F VLV+G E +G+ I
Sbjct: 200 VARV-VN-LNRALEELKQAGFWIYGTSATADQ-PLYTVKFSGPVVLVVGSEGQGLTRLIE 256
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + IP +G SLNV V+ +AL+E RQ+R
Sbjct: 257 QSCDILVSIPLVGQTPSLNVSVATGMALYEIYRQRR 292
>gi|59710710|ref|YP_203486.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri ES114]
gi|59478811|gb|AAW84598.1| tRNA (Guanosine-2'-O-)-methyltransferase [Vibrio fischeri ES114]
Length = 229
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI---SVTAE 1756
++A + L + + N++ + RT + A+G+ A + +Q Q++ S A
Sbjct: 13 LKARQTDLTLCLEEVHKANNVSAIVRTAD---ATGIHKIHA-VWPTEQMQMLGHTSAGAR 68
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
WV VE N I+ K +G +L + ++ + + K T ++LG EK GI
Sbjct: 69 NWVD-VETHKN-IEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGIS 126
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ M D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 127 KKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|317478097|ref|ZP_07937272.1| SpoU rRNA methylase [Bacteroides sp. 4_1_36]
gi|423304403|ref|ZP_17282402.1| hypothetical protein HMPREF1072_01342 [Bacteroides uniformis
CL03T00C23]
gi|423310483|ref|ZP_17288467.1| hypothetical protein HMPREF1073_03217 [Bacteroides uniformis
CL03T12C37]
gi|316905695|gb|EFV27474.1| SpoU rRNA methylase [Bacteroides sp. 4_1_36]
gi|392681654|gb|EIY75011.1| hypothetical protein HMPREF1073_03217 [Bacteroides uniformis
CL03T12C37]
gi|392684732|gb|EIY78055.1| hypothetical protein HMPREF1072_01342 [Bacteroides uniformis
CL03T00C23]
Length = 175
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ V +EQ S+ LD+ + KK +V+G E +G+ ++I CIEIPQ G
Sbjct: 94 KSEGYIVYSVEQAEGSVMLDELVLDKTKKYAVVMGNEVKGVQQEVIDHSHGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ I +W+ ++ R
Sbjct: 154 KHSLNVSVTAGIVIWDLFKKLR 175
>gi|153807072|ref|ZP_01959740.1| hypothetical protein BACCAC_01349 [Bacteroides caccae ATCC 43185]
gi|423219946|ref|ZP_17206442.1| hypothetical protein HMPREF1061_03215 [Bacteroides caccae CL03T12C61]
gi|149130192|gb|EDM21402.1| RNA methyltransferase, TrmH family [Bacteroides caccae ATCC 43185]
gi|392624209|gb|EIY18302.1| hypothetical protein HMPREF1061_03215 [Bacteroides caccae CL03T12C61]
Length = 175
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD--ANILHDKQFQL 1750
R A E +A + V+V I + N+ + RT + F+ + + A H +
Sbjct: 11 RISAEEFKQAEKLPLVVVLDDIRSLHNIGSVFRTSDAFRIECIYLCGITATPPH-PEMHK 69
Query: 1751 ISVTAEKWV--PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVL 1806
++ AE V V+ V+++ + + G+ V +EQ SI LD+ KK +
Sbjct: 70 TALGAEFTVDWKYVDNAVDAVDNL----RKAGYMVYSVEQAEGSIMLDELELDKSKKYAI 125
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
V+G E +G+ ++I+ D CIEIPQ G SLNV V+ I +W+ ++ R
Sbjct: 126 VMGNEVKGVQQEVINHSDGCIEIPQYGTKHSLNVSVTTGIVIWDLFKKLR 175
>gi|289705731|ref|ZP_06502115.1| RNA methyltransferase, TrmH family [Micrococcus luteus SK58]
gi|289557571|gb|EFD50878.1| RNA methyltransferase, TrmH family [Micrococcus luteus SK58]
Length = 256
Score = 61.6 bits (148), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ + RT F A+G+ I I + + ++ ++++ + +++ F E
Sbjct: 105 NIGTVVRTANAFNAAGVHI----IGRRRWNRRGAMVTDRYLHVHHH--ETVEAFTEWAAG 158
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG VLG++ S+P++ + FP+ VLV G+E G+ ++ A + I Q G RS+
Sbjct: 159 EGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQYGSTRSI 218
Query: 1839 NVHVSGAIALWEYTRQQ 1855
N V+ IA+ + RQ
Sbjct: 219 NAGVAAGIAMHAWIRQH 235
>gi|323343642|ref|ZP_08083869.1| SpoU family RNA methylase [Prevotella oralis ATCC 33269]
gi|323095461|gb|EFZ38035.1| SpoU family RNA methylase [Prevotella oralis ATCC 33269]
Length = 176
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
EG+ +EQ S+ L KK +V G E +G+ +I D+C+EIPQLG
Sbjct: 96 EGYFCYAVEQAEGSVKLQTLRLNRAKKYAVVFGNEVKGVKQTVIDCCDSCLEIPQLGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV V+ + +WE+ +Q
Sbjct: 156 SLNVSVTAGVVVWEFAKQ 173
>gi|146302736|ref|YP_001197327.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium johnsoniae UW101]
gi|146157154|gb|ABQ08008.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacterium johnsoniae UW101]
Length = 220
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
E F +VL+ R+ + F + + ++ N + + R+CEVF L I +
Sbjct: 20 EKFLKVLENRT----------KHFTIAVEDVYQMHNTSAVMRSCEVFGIQELNIIEQRFG 69
Query: 1744 H--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
DK+ I++ A+KWV I +++ + + +G+ ++ N + +
Sbjct: 70 KRIDKE---IALGAQKWVDINRF--DTVDGCISSLRDKGYQIIATTPHENDCLIQDFDIS 124
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K + L G EK+G+ +I+ D ++IP +G SLN+ VS AI + T + R
Sbjct: 125 KPSALFFGTEKDGLSPEILEKADGFLKIPMVGFTESLNISVSAAIIIQNLTNRLR 179
>gi|307109015|gb|EFN57254.1| hypothetical protein CHLNCDRAFT_21737 [Chlorella variabilis]
Length = 201
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 1683 DELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA----IA 1738
D L + Q R +E + A+R VL +++ I ++ LA C A G I
Sbjct: 24 DTLTPLMTQDRIQRIERVCAARTFNVL--PIVESIYDMGNLAAVCRSADALGFGALHVIR 81
Query: 1739 DANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY 1798
+ KQ + A+KW+ V+V NS + + K G+ V+ + +++ + Q
Sbjct: 82 NTRDERYKQSTRSAAGADKWLD-VQV-FNSTEECVLNAKRLGYQVVATHLSPDAVDISQI 139
Query: 1799 MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ + T ++G EK G+ + + + DAC +P +G V S N+ V+ A+ ++E R +
Sbjct: 140 DWTRPTAFIMGNEKRGVSCEAVALADACAVVPMVGFVDSYNLSVAAALIMYEARRMR 196
>gi|292900306|ref|YP_003539675.1| RNA methyltransferase [Erwinia amylovora ATCC 49946]
gi|291200154|emb|CBJ47280.1| putative RNA methyltransferase [Erwinia amylovora ATCC 49946]
gi|312173349|emb|CBX81604.1| putative tRNA/rRNA methyltransferase [Erwinia amylovora ATCC
BAA-2158]
Length = 344
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ R+C F A GL + DA++L + TAE V+ + S L+ +
Sbjct: 210 NLGGIMRSCAHFGAKGLLVDDASLL---ESGAAVRTAEGGAEHVQAISGESFAAGLDAFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + +PL P + VLVLG+E++G+ D + I G V S
Sbjct: 267 QAGYTIV-TTSSHQGVPLSSAELPARMVLVLGQERDGLSDSSFQRGDLSVSIGGTGNVES 325
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV V+ + L E+ RQ
Sbjct: 326 LNVSVATGVLLAEWWRQ 342
>gi|282899513|ref|ZP_06307477.1| RNA methyltransferase TrmH, group 3 [Cylindrospermopsis raciborskii
CS-505]
gi|281195392|gb|EFA70325.1| RNA methyltransferase TrmH, group 3 [Cylindrospermopsis raciborskii
CS-505]
Length = 320
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 32/199 (16%)
Query: 1668 GNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTC 1727
GN + + EL D + QA++++ + ++VA I NL + RT
Sbjct: 125 GNHQGVAAQIAPYTYTELEDLISQAQTVS--------EPVIVVADGITDPHNLGAIIRTA 176
Query: 1728 EVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERK 1776
E A GL I Q + + +T+ +V+V ++++F LE+
Sbjct: 177 EAIGAQGLVIP--------QRRAVGITST----VVKVAAGALENFSVARVVNLSRALEQL 224
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K GF + G T S PL F TVLV+G E EG+ + D + IP G
Sbjct: 225 KESGFWIYGTAATG-SEPLHSVRFTGSTVLVVGSEGEGLSMLTQKSCDVLVSIPLQGKTP 283
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
SLN V+ +AL+E RQ+
Sbjct: 284 SLNASVATGMALYEIYRQR 302
>gi|212705009|ref|ZP_03313137.1| hypothetical protein DESPIG_03077 [Desulfovibrio piger ATCC 29098]
gi|212671561|gb|EEB32044.1| RNA methyltransferase, TrmH family [Desulfovibrio piger ATCC 29098]
Length = 196
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 1693 RSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI 1751
R + ++ A RQ LV + I N++ + R+C+ F + + + +
Sbjct: 9 RKARLGSVLAHRQPDLTLVLANIHDPHNVSAIYRSCDAFGVDKVHLYYTDTPFPVLGRKT 68
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERK-----KHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
S +A KWV S++H ++ + + +L T + PL + F + T +
Sbjct: 69 SASARKWV-------ESVRHRDRQELETSLRAQNMQILATTFTPTAKPLRTWDFTRPTAI 121
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++G E G+ ++I M D + IP G+++S NV V+ AI L E RQ+
Sbjct: 122 IMGNEHSGVNEELISMADGELYIPMYGMIQSFNVSVASAIILSEACRQR 170
>gi|270295097|ref|ZP_06201298.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274344|gb|EFA20205.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 175
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ V +EQ S+ LD+ + KK +V+G E +G+ ++I CIEIPQ G
Sbjct: 94 KSEGYIVYSVEQAEGSVMLDELVLDKTKKYAVVMGNEVKGVQQEVIDHSHGCIEIPQYGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ I +W+ ++ R
Sbjct: 154 KHSLNVSVTAGIVIWDLFKKLR 175
>gi|345893382|ref|ZP_08844181.1| hypothetical protein HMPREF1022_02841 [Desulfovibrio sp. 6_1_46AFAA]
gi|345046299|gb|EGW50190.1| hypothetical protein HMPREF1022_02841 [Desulfovibrio sp. 6_1_46AFAA]
Length = 196
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL 1750
+ R+ +E +R + LV + I N++ + R+C+ F S + + N +
Sbjct: 8 RRRARLLEVLRHRQNDLTLVLANIHDPHNVSAIYRSCDAFGLSKVHLYYTNTPFPTLGRK 67
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
S +A KWV E NS + + +GF VL + + PL + F + T +++G
Sbjct: 68 TSASARKWVE-SERHKNSAD-LMRTLRGQGFQVLATSCSKTARPLRAWDFIRPTAVIMGN 125
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E G+ +++ + D + IP G+++S NV V+ AI L E RQ+
Sbjct: 126 EHSGVEEELLSLADGQLYIPMYGMIQSFNVSVAAAIILAEAARQR 170
>gi|378954065|ref|YP_005211552.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438145298|ref|ZP_20875782.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|357204676|gb|AET52722.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434938840|gb|ELL45741.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 345
Score = 61.6 bits (148), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGSVESLNVSVATGVLLAEWWRQNK 344
>gi|281421671|ref|ZP_06252670.1| RNA methylase, SpoU family [Prevotella copri DSM 18205]
gi|281404305|gb|EFB34985.1| RNA methylase, SpoU family [Prevotella copri DSM 18205]
Length = 179
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 1688 QVLQARSLAMETIR-ASRQQFVLVASLIDRIPNLAGLARTCEVFKAS-----GLAIADAN 1741
+ ++ L +E + A + ++V + + N+ + R+C+ F+ G+ N
Sbjct: 5 RTIEMNRLTLEEFKGAEKLPLIVVLDDVRSLYNVGSVFRSCDAFRVEAVYLCGITATPPN 64
Query: 1742 I-LHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANS-----IPL 1795
+ +H ++ E V E+ K +G+ V +EQ S +P
Sbjct: 65 VEIHKTALGGEDSVDWEYFKTTEEAV-------EKLKQKGYFVYSIEQVEGSTKLQNLPE 117
Query: 1796 DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
K ++ G E +G+ +I+ M D C+EIPQ G SLNV V+ I +WE+ +
Sbjct: 118 AHPSLSKGYAVIFGNEVKGVKQNIVDMSDGCLEIPQFGTKHSLNVSVTAGIVVWEFAK 175
>gi|404367991|ref|ZP_10973350.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium ulcerans
ATCC 49185]
gi|313690571|gb|EFS27406.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium ulcerans
ATCC 49185]
Length = 235
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E I + VL+ I N L R+ EVF G+ I + N + ++ S A
Sbjct: 79 LEKIAPMEKSIVLILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRVNETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
+ V IV+V +I L + K + V G E S + +P +T LVLG E GI
Sbjct: 139 IEHVDIVKV--TNISEALLKLKKLDYWVYGAEGEG-SKDYSKEKYPSRTALVLGSEGNGI 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
+ D I+IP G + SLNV V+G I L E +
Sbjct: 196 RKKVKENCDVLIKIPMYGKINSLNVSVAGGIILSEIVK 233
>gi|238912713|ref|ZP_04656550.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 345
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPSDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|373460656|ref|ZP_09552407.1| hypothetical protein HMPREF9944_00671 [Prevotella maculosa OT 289]
gi|371955274|gb|EHO73078.1| hypothetical protein HMPREF9944_00671 [Prevotella maculosa OT 289]
Length = 182
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1777 KHEGFSVLGLEQTANSIPL-----DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
K +G+ V +EQ S+ L D + K ++LG E +G+ +++ M D C+EIPQ
Sbjct: 94 KADGYFVYSVEQVEGSMMLQDLTIDPKLGAKGYAVILGNEVKGVKQEVVDMSDGCLEIPQ 153
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQ 1854
G SLNV + I +WE+ R+
Sbjct: 154 FGTKHSLNVSTTAGIVMWEFARK 176
>gi|417333153|ref|ZP_12116807.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353579519|gb|EHC41037.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 218
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 65 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 124
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 125 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDYLPEAA 180
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 181 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 217
>gi|428780657|ref|YP_007172443.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
gi|428694936|gb|AFZ51086.1| rRNA methylase, putative, group 3 [Dactylococcopsis salina PCC 8305]
Length = 302
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 1697 METIRASRQQFVLVAS-LIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVT 1754
ME R+S ++ +++A+ I NL + RT E A GL I + ++
Sbjct: 131 MEKARSSSEKPIIIAAEGITDPQNLGAIIRTAEALGAQGLVIPQRRAVGITSTVMKVAAG 190
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
+++P+ V VN LE K GF + G ++ L Q F + VLV+G E +G
Sbjct: 191 GLEYLPVARV-VN-FSRALEELKKAGFWIYGTVAGEGTL-LPQVNFDQSVVLVIGGEAKG 247
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT--RQQRF 1857
+ + D + IP +G SLN HV+ AIAL+E + R ++F
Sbjct: 248 LNLLTQRHCDQLVSIPLVGKTESLNAHVACAIALYEVSCRRHKKF 292
>gi|417541072|ref|ZP_12192907.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
gi|353661480|gb|EHD00788.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Wandsworth str. A4-580]
Length = 245
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 92 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 151
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 152 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDYLPEAA 207
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 208 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 244
>gi|417384987|ref|ZP_12150180.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|417477064|ref|ZP_12171375.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353607150|gb|EHC61154.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353638760|gb|EHC84235.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 237
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 84 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 143
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 144 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDFLPEAA 199
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 200 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 236
>gi|345881977|ref|ZP_08833487.1| hypothetical protein HMPREF9431_02151 [Prevotella oulorum F0390]
gi|343918636|gb|EGV29399.1| hypothetical protein HMPREF9431_02151 [Prevotella oulorum F0390]
Length = 179
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT-----VLVLGREKEGIPVDIIH 1821
+S + +E + G+ V +EQ S L + +T +VLG E +G+ ++
Sbjct: 84 SSAETAVETLQRNGYFVYAVEQVEGSCKLQKLNLHTETPAKGYAVVLGNEVKGVQQSVVD 143
Query: 1822 MLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ D C+EIPQLG SLNV + I +WE+ RQ
Sbjct: 144 LCDGCLEIPQLGTKHSLNVSTTAGIVMWEFARQ 176
>gi|188993889|ref|YP_001928141.1| SpoU rRNA methylase family protein [Porphyromonas gingivalis ATCC
33277]
gi|334145836|ref|YP_004508763.1| putative SpoU rRNA methylase family protein [Porphyromonas gingivalis
TDC60]
gi|419970899|ref|ZP_14486370.1| RNA methyltransferase, TrmH family [Porphyromonas gingivalis W50]
gi|188593569|dbj|BAG32544.1| probable SpoU rRNA methylase family protein [Porphyromonas gingivalis
ATCC 33277]
gi|333802990|dbj|BAK24197.1| probable SpoU rRNA methylase family protein [Porphyromonas gingivalis
TDC60]
gi|392609772|gb|EIW92574.1| RNA methyltransferase, TrmH family [Porphyromonas gingivalis W50]
Length = 180
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIAD--ANILHDKQFQLISVTAE---KWVPIVEVPVNS 1768
I + N+ + RT + F+ GL + A H ++ AE KW +S
Sbjct: 32 IRSMNNVGSVFRTADAFRLEGLCLCGITARPPH-PDIHKTALGAEDSVKWEYF-----SS 85
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHMLDAC 1826
+ +E K +G+S+ +EQ S+ L+ + K T L+ G E +G+ + I + D C
Sbjct: 86 VVDAIEELKAKGYSICAIEQAEGSLSLENFSPSKGTRYALIFGNEVKGVRQEAIDLCDLC 145
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWE 1850
+EIPQ G SLNV V+ I +W+
Sbjct: 146 LEIPQFGTKHSLNVSVTAGIVIWQ 169
>gi|429755167|ref|ZP_19287839.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429175578|gb|EKY17015.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 180
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKSPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 P--IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGI 1815
VE ++++ E+ K +G ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AWEYVENTLSAV----EKLKEQGVYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 135 EQEVVSASDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|315224226|ref|ZP_07866066.1| SpoU family RNA methylase [Capnocytophaga ochracea F0287]
gi|420158354|ref|ZP_14665172.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str. Holt
25]
gi|314945959|gb|EFS97968.1| SpoU family RNA methylase [Capnocytophaga ochracea F0287]
gi|394763703|gb|EJF45773.1| RNA methyltransferase, TrmH family [Capnocytophaga ochracea str. Holt
25]
Length = 180
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 P--IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGI 1815
VE ++++ E+ K +G ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AWEYVENTLSAV----EKLKEQGVYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 135 EQEVVSASDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|420150089|ref|ZP_14657251.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394752627|gb|EJF36307.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 180
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKAS-----GLAIADANI-LHDKQFQLISVT 1754
+A + +++ + + N+ + RTC+ F G+ N +H
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREK 1812
A ++V N++ +E+ K +G ++ +EQ NS L+ + +K ++ G E
Sbjct: 79 AWEYVE------NTLS-VVEKLKEQGVYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEV 131
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G+ +++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 132 KGVEQEVVSASDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|154507934|ref|ZP_02043576.1| hypothetical protein ACTODO_00420 [Actinomyces odontolyticus ATCC
17982]
gi|153797568|gb|EDN79988.1| RNA methyltransferase, TrmH family [Actinomyces odontolyticus ATCC
17982]
Length = 243
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 1693 RSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF 1748
R M+ IRA F + +D N+ + RT A+ + +++ K++
Sbjct: 77 RYWTMDAIRADIAARSLPFEVAVENLDHDFNIGSIVRT-----ANAMGARRVHVVGRKRW 131
Query: 1749 -QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ ++ ++++P+ P ++ +E EG +++G++ S+ L+ + P++ LV
Sbjct: 132 NRRGAMVTDRYLPVDHRP--EVRELVEHCSKEGLTLVGVDNVEGSVALEGAVLPERACLV 189
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ ++I D+ + I Q G RS+NV + AI +W + +
Sbjct: 190 FGSEASGLSEEMIRACDSVVAITQRGSTRSMNVGHAAAIVMWAHASR 236
>gi|398797253|ref|ZP_10556576.1| rRNA methylase [Pantoea sp. GM01]
gi|398103373|gb|EJL93543.1| rRNA methylase [Pantoea sp. GM01]
Length = 231
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 1764 VPVNSIKHFLERKKH---EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V V + +H E +H EG VL +A ++ + + K T +++G+EK GI + +
Sbjct: 71 VKVKTHRHIAEAVRHLKDEGMQVLATNLSAKAVDFREVDYTKPTCILMGQEKTGITAEAL 130
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ D I +P +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 131 ALADQDIIVPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|258406290|ref|YP_003199032.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense DSM
5692]
gi|257798517|gb|ACV69454.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense DSM
5692]
Length = 202
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 1691 QARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF- 1748
+AR + + A RQ+ LV + I N+A + R+C+ F + D ++L+ +
Sbjct: 13 EAREKRIREVLARRQKDLTLVMNNIHDPHNVAAIMRSCDAF-----GVPDVHLLYTSEAF 67
Query: 1749 ----QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+ S +A KWV S + + G +L + ++ PL ++ F T
Sbjct: 68 PALGRRASASARKWVG--RHHHTSSEALAGHLRDHGMRILSTSCSPSARPLPEWEFTSPT 125
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+VLG E G+ + +D + IP G+V+S NV V+ AI L+E RQ+
Sbjct: 126 AIVLGNEHRGVDPALRSHIDGELFIPMQGMVQSFNVSVAAAIILYEAWRQR 176
>gi|345300444|ref|YP_004829802.1| tRNA/rRNA methyltransferase SpoU [Enterobacter asburiae LF7a]
gi|345094381|gb|AEN66017.1| tRNA/rRNA methyltransferase (SpoU) [Enterobacter asburiae LF7a]
Length = 366
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 231 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDAIEQFR 287
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 288 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 346
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 347 LNVSVATGVLLAEWWRQNK 365
>gi|296104254|ref|YP_003614400.1| putative methyltransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058713|gb|ADF63451.1| putative methyltransferase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 361
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 226 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDAIEQFR 282
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 283 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 341
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 342 LNVSVATGVLLAEWWRQNK 360
>gi|317049240|ref|YP_004116888.1| tRNA/rRNA methyltransferase SpoU [Pantoea sp. At-9b]
gi|316950857|gb|ADU70332.1| tRNA/rRNA methyltransferase (SpoU) [Pantoea sp. At-9b]
Length = 359
Score = 61.2 bits (147), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL G+ R+C F GL + DA++L TAE
Sbjct: 207 QAEAKDCVLALEDVSNPHNLGGIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 263
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + S LE + G++++ + PL + P K VLVLG+E+EG+
Sbjct: 264 HVQAISGESFSAGLEAFRKAGYTIV-TTSSHEGTPLAKAELPAKMVLVLGQEREGLSDSA 322
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ I L E+ RQ
Sbjct: 323 FQQGDMSLSIGGTGNVESLNVSVATGILLAEWWRQ 357
>gi|124025191|ref|YP_001014307.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
gi|123960259|gb|ABM75042.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
Length = 229
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE---KWVPIVEVPVNSIK 1770
+++ NL+ + R+C+ A G+ A A I + ++F + TA+ KWV I + + +
Sbjct: 29 VEKPHNLSAIIRSCD---AVGVLEAYA-IFNKEKFLTFNSTAQGSQKWVKINQYKMTT-- 82
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
++ K +GF + G SI + F T VLG EK GI + ++D I IP
Sbjct: 83 EAIKVLKEKGFKLYGTNLNPRSIDYRKCNFKGPTAFVLGAEKWGISEEASSLMDEHIHIP 142
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V SLNV V+ + L+E RQ++
Sbjct: 143 MRGMVESLNVSVAASALLFEAIRQRQ 168
>gi|417325832|ref|ZP_12111688.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353574898|gb|EHC37795.1| tRNA/rRNA methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 247
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 94 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 153
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 154 PITG---ESIVDVLDDFRQAGYTVV-TTSSERGQALFSTTLPEKMVLVLGREYDFLPEAA 209
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 210 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 246
>gi|392980266|ref|YP_006478854.1| putative methyltransferase [Enterobacter cloacae subsp. dissolvens
SDM]
gi|392326199|gb|AFM61152.1| putative methyltransferase [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 361
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 226 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDAIEQFR 282
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 283 KAGYSIVTTSSHAGT-PLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 341
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 342 LNVSVATGVLLAEWWRQNK 360
>gi|282896448|ref|ZP_06304469.1| RNA methyltransferase TrmH, group 3 [Raphidiopsis brookii D9]
gi|281198736|gb|EFA73616.1| RNA methyltransferase TrmH, group 3 [Raphidiopsis brookii D9]
Length = 324
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA++++ + ++VA I NL + RT E A GL I
Sbjct: 145 ELEDLISQAQTVS--------EPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIP----- 191
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + + +T+ +V+V ++++F LE+ K GF + G T S
Sbjct: 192 ---QRRAVGITST----VVKVAAGALENFSVARVVNLSRALEQLKESGFWIYGTAATG-S 243
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
PL F TVLV+G E EG+ + D + IP G SLN V+ +AL+E
Sbjct: 244 EPLHSVRFTGSTVLVVGSEGEGLSMLTQKSCDVLVSIPLQGKTPSLNASVATGMALYEIY 303
Query: 1853 RQQ 1855
RQ+
Sbjct: 304 RQR 306
>gi|254429253|ref|ZP_05042960.1| RNA methyltransferase, TrmH family [Alcanivorax sp. DG881]
gi|196195422|gb|EDX90381.1| RNA methyltransferase, TrmH family [Alcanivorax sp. DG881]
Length = 230
Score = 61.2 bits (147), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQLISVTA- 1755
ET+ + ++ + + N+A + RTC+ + I D + +L + ++ + TA
Sbjct: 11 ETLDRRQPDLTVIMDGVHKPHNIAAIVRTCD-----AVGILDVHAVLPKNRARMAAGTAM 65
Query: 1756 --EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
++WV + + + + + +G VL + ++IP + + + T L+LG EK
Sbjct: 66 GSQRWVQVHKR--DESTDVIRELQGQGVQVLAAHLSDDAIPYREVDYTRPTALLLGTEKF 123
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+ ++ ++D + IP +G+V S NV V+ AI L E Q+R
Sbjct: 124 GVSDEVASVVDQNVTIPMMGMVESFNVSVAAAIILSEACEQRR 166
>gi|227485587|ref|ZP_03915903.1| tRNA/rRNA methyltransferase [Anaerococcus lactolyticus ATCC 51172]
gi|227236453|gb|EEI86468.1| tRNA/rRNA methyltransferase [Anaerococcus lactolyticus ATCC 51172]
Length = 239
Score = 61.2 bits (147), Expect = 6e-06, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 1689 VLQARSLAMETIR-ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
+++A S + +R + Q +++ I+ NL + R+ E F G+ I +
Sbjct: 71 MVEAESFEYKDLRDLDKYQRLIILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASVSP 130
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ +A I + V + +E K GF V GL A+S P+DQ K L+
Sbjct: 131 I-VYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASS-PIDQVDLKGKVCLI 188
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+G E +G+ + D I IP G V SLN V+ AIA++E RQ F
Sbjct: 189 VGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQNGF 238
>gi|161502249|ref|YP_001569361.1| putative methyltransferase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160863596|gb|ABX20219.1| hypothetical protein SARI_00277 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-]
Length = 345
Score = 61.2 bits (147), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL I NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDIANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF----PKKTVLVLGREKEGI 1815
PI SI L+ + G++V+ S Q +F P+K VLVLGRE + +
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVV-----TTSSDRGQALFGATLPEKMVLVLGREYDFL 303
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
P D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 304 PEAAREPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|417392753|ref|ZP_12155482.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353610856|gb|EHC63692.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
Length = 247
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 94 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 153
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 154 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDFLPEAA 209
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 210 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 246
>gi|213612386|ref|ZP_03370212.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 223
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 70 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 129
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 130 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDYLPEAA 185
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 186 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 222
>gi|398790677|ref|ZP_10551652.1| rRNA methylase [Pantoea sp. YR343]
gi|398218283|gb|EJN04794.1| rRNA methylase [Pantoea sp. YR343]
Length = 370
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+A + VL + NL G+ R+C F GL + DA++L + TAE
Sbjct: 217 TKAPTKDCVLALEDVSNPHNLGGIMRSCAHFGVKGLLVNDASLL---ESGAAVRTAEGGA 273
Query: 1760 PIVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
V+ + S LE + G++++ + PL + P K VLVLG+E EG+
Sbjct: 274 EHVQAISGESFADGLEAFRKAGYTIV-TTSSHEGTPLAKAELPAKMVLVLGQESEGLSDS 332
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ I L E+ RQ
Sbjct: 333 AFQQGDLSLSIGGTGNVESLNVSVATGILLAEWWRQ 368
>gi|325102944|ref|YP_004272598.1| tRNA/rRNA methyltransferase SpoU [Pedobacter saltans DSM 12145]
gi|324971792|gb|ADY50776.1| tRNA/rRNA methyltransferase (SpoU) [Pedobacter saltans DSM 12145]
Length = 176
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKT---VLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K G+ ++ +EQ NSI L + PKK L G E G+ +++ +D CIEIPQ G
Sbjct: 94 KENGYQIIAIEQAENSISLLDFE-PKKDQKFALFFGNEVNGVSEEVMKQIDTCIEIPQFG 152
Query: 1834 VVRSLNVHVSGAIALWEY 1851
S N+ +S I LW++
Sbjct: 153 TKHSFNIVISTGIVLWDF 170
>gi|213425263|ref|ZP_03358013.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 274
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 121 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 180
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 181 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKMVLVLGREYDYLPEAA 236
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 237 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 273
>gi|340351562|ref|ZP_08674474.1| SpoU family RNA methylase [Prevotella pallens ATCC 700821]
gi|339617846|gb|EGQ22459.1| SpoU family RNA methylase [Prevotella pallens ATCC 700821]
Length = 185
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 15/179 (8%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+ ++ L++E + SR+ V+V + + N+ + R+C+ F+ + + +
Sbjct: 5 RTIEMNRLSLEEFKQSRKLPLVVVLDDVRSLYNVGSVFRSCDAFRIEAIYLCGITATPPN 64
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD---QYMFP- 1801
+ ++ AE V +S + + + K + V +EQ S PL + + P
Sbjct: 65 AEIHKTALGAENSVDWQYF--SSAEDAVMQLKQNNYYVYSVEQVEGSTPLQTLSEQISPI 122
Query: 1802 -------KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
K +VLG E +G+ I+ + D C+EIPQ G SLNV V+ I +WE+ R
Sbjct: 123 TNGADAQKHYAVVLGNEVKGVHQSIVDLSDGCLEIPQFGTKHSLNVSVTAGIVVWEFAR 181
>gi|445116822|ref|ZP_21378653.1| hypothetical protein HMPREF0662_01717 [Prevotella nigrescens F0103]
gi|444839991|gb|ELX67035.1| hypothetical protein HMPREF0662_01717 [Prevotella nigrescens F0103]
Length = 185
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+ ++ + L++E + SR+ V+V + + N+ + R+C+ F+ + + +
Sbjct: 5 RTIEMKRLSLEEFKQSRKLPLVVVLDDVRSLYNVGSVFRSCDAFRIEAIYLCGITATPPN 64
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM------ 1799
+ ++ AE V ++ + + R K G+ V +EQ S L
Sbjct: 65 AEIHKTALGAENSVDWQYF--SNAEDAVTRLKDNGYFVYSVEQVEGSTALQDLSEHISSI 122
Query: 1800 -----FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
K +VLG E +G+ ++ + D C+EIPQ G SLNV V+ I +WE+ R
Sbjct: 123 NSDTSIQKHYAVVLGNEVKGVHQSVVDLSDGCLEIPQFGTKHSLNVSVTAGIVVWEFAR 181
>gi|420374564|ref|ZP_14874535.1| RNA 2'-O ribose methyltransferase substrate binding family protein,
partial [Shigella flexneri 1235-66]
gi|391316127|gb|EIQ73604.1| RNA 2'-O ribose methyltransferase substrate binding family protein,
partial [Shigella flexneri 1235-66]
Length = 237
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKW 1758
I+A Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 83 IQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHV 142
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
PI ++I + L+ + G++V+ + PL + P K VLVLG+E EG+P
Sbjct: 143 QPITG---DNIVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 198
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 199 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 236
>gi|437764014|ref|ZP_20835000.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|438096339|ref|ZP_20862107.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435308346|gb|ELO83313.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435327321|gb|ELO99052.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
Length = 331
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 178 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 237
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 238 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 293
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 294 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 330
>gi|437841372|ref|ZP_20846640.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435296710|gb|ELO73070.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|437721370|ref|ZP_20828988.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435294389|gb|ELO71022.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
Length = 343
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 190 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 249
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 250 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 305
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 306 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 342
>gi|56412529|ref|YP_149604.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197361464|ref|YP_002141100.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56126786|gb|AAV76292.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197092940|emb|CAR58370.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|427614192|ref|ZP_18942990.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414035065|gb|EKT17965.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|417367218|ref|ZP_12139190.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353589839|gb|EHC48537.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|224584503|ref|YP_002638301.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375124546|ref|ZP_09769710.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|379701887|ref|YP_005243615.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383497326|ref|YP_005398015.1| RNA methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|224469030|gb|ACN46860.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|323130986|gb|ADX18416.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326628796|gb|EGE35139.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|380464147|gb|AFD59550.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
Length = 349
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 196 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 255
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 256 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 311
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 312 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 348
>gi|168468062|ref|ZP_02701899.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418761861|ref|ZP_13317998.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418767844|ref|ZP_13323902.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418773009|ref|ZP_13329003.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777879|ref|ZP_13333804.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779375|ref|ZP_13335277.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784090|ref|ZP_13339930.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418800665|ref|ZP_13356315.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419787588|ref|ZP_14313297.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419791660|ref|ZP_14317308.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|195628860|gb|EDX48274.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392619598|gb|EIX01979.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392619968|gb|EIX02342.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392730420|gb|EIZ87663.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392733645|gb|EIZ90845.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392738471|gb|EIZ95613.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392742851|gb|EIZ99929.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392753260|gb|EJA10196.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392755205|gb|EJA12116.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392783580|gb|EJA40199.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|197263980|ref|ZP_03164054.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197242235|gb|EDY24855.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|16761506|ref|NP_457123.1| methyltransferase [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16765968|ref|NP_461583.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29140797|ref|NP_804139.1| methyltransferase [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62181223|ref|YP_217640.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161612632|ref|YP_001586597.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553664|ref|ZP_02347411.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167994861|ref|ZP_02575951.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168245088|ref|ZP_02670020.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168823163|ref|ZP_02835163.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194448811|ref|YP_002046657.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197247519|ref|YP_002147552.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|198243831|ref|YP_002216663.1| methyltransferase [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200387404|ref|ZP_03214016.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205353691|ref|YP_002227492.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858002|ref|YP_002244653.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213161475|ref|ZP_03347185.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213646341|ref|ZP_03376394.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289812223|ref|ZP_06542852.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289825485|ref|ZP_06544692.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|374978914|ref|ZP_09720254.1| hypothetical tRNA/rRNA methyltransferase yfiF [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|375002443|ref|ZP_09726783.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|375115565|ref|ZP_09760735.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|375120152|ref|ZP_09765319.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378446067|ref|YP_005233699.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378451411|ref|YP_005238770.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378700551|ref|YP_005182508.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378958405|ref|YP_005215891.1| putative tRNA/rRNA methyltransferase yfiF [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378985213|ref|YP_005248369.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378990030|ref|YP_005253194.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|409249703|ref|YP_006885522.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416530988|ref|ZP_11745402.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416539185|ref|ZP_11749894.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416552211|ref|ZP_11756940.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|417360057|ref|ZP_12134271.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|418790789|ref|ZP_13346558.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418792091|ref|ZP_13347839.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418799133|ref|ZP_13354801.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418844009|ref|ZP_13398803.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418859675|ref|ZP_13414276.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418862305|ref|ZP_13416848.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418867781|ref|ZP_13422235.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419729116|ref|ZP_14256076.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734466|ref|ZP_14261357.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419740885|ref|ZP_14267602.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742685|ref|ZP_14269357.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419751296|ref|ZP_14277720.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|421356974|ref|ZP_15807287.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361456|ref|ZP_15811720.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367209|ref|ZP_15817410.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421372613|ref|ZP_15822761.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375811|ref|ZP_15825923.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421381127|ref|ZP_15831183.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421383807|ref|ZP_15833838.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421388580|ref|ZP_15838568.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421396369|ref|ZP_15846300.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421397139|ref|ZP_15847061.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421401830|ref|ZP_15851696.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408986|ref|ZP_15858783.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421413638|ref|ZP_15863390.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421415555|ref|ZP_15865281.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421423691|ref|ZP_15873346.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421424761|ref|ZP_15874399.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421429280|ref|ZP_15878877.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421433545|ref|ZP_15883104.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421437989|ref|ZP_15887493.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446217|ref|ZP_15895633.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421449647|ref|ZP_15899029.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421571740|ref|ZP_16017409.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573673|ref|ZP_16019306.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421581217|ref|ZP_16026764.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421582934|ref|ZP_16028464.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|422026965|ref|ZP_16373319.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031994|ref|ZP_16378121.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553392|ref|ZP_18928616.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427570674|ref|ZP_18933333.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591226|ref|ZP_18938133.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427638888|ref|ZP_18947897.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656984|ref|ZP_18952647.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662250|ref|ZP_18957567.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427674589|ref|ZP_18962379.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427799852|ref|ZP_18967708.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|436622353|ref|ZP_20514751.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436662621|ref|ZP_20517199.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436799413|ref|ZP_20523753.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811115|ref|ZP_20530111.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436817074|ref|ZP_20534156.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436845561|ref|ZP_20538888.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436853427|ref|ZP_20543387.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436859483|ref|ZP_20547396.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436863656|ref|ZP_20549951.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868509|ref|ZP_20553269.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436876335|ref|ZP_20557765.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436887235|ref|ZP_20563635.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436898848|ref|ZP_20570483.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436901214|ref|ZP_20572138.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436909332|ref|ZP_20576056.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436921266|ref|ZP_20583669.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436929959|ref|ZP_20588470.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436938145|ref|ZP_20593057.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436945410|ref|ZP_20597564.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436949576|ref|ZP_20599557.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436960833|ref|ZP_20604470.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436967539|ref|ZP_20607370.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436984000|ref|ZP_20614320.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436991205|ref|ZP_20617384.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437007505|ref|ZP_20623358.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437016730|ref|ZP_20626146.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437033398|ref|ZP_20632592.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437037847|ref|ZP_20634257.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437049553|ref|ZP_20640145.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055773|ref|ZP_20643578.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437066476|ref|ZP_20649554.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437072895|ref|ZP_20652737.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437080718|ref|ZP_20657268.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088819|ref|ZP_20661724.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437111704|ref|ZP_20668291.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437118483|ref|ZP_20670317.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437133518|ref|ZP_20678491.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139561|ref|ZP_20681894.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437143653|ref|ZP_20684477.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437150054|ref|ZP_20688564.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437164171|ref|ZP_20697054.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437170277|ref|ZP_20700334.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437179385|ref|ZP_20705344.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437186801|ref|ZP_20709729.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437194318|ref|ZP_20710985.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437257559|ref|ZP_20715975.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437270306|ref|ZP_20723102.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437275087|ref|ZP_20725633.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437284106|ref|ZP_20729359.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437315517|ref|ZP_20737206.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437330837|ref|ZP_20741864.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437343072|ref|ZP_20745685.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437351375|ref|ZP_20747512.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437429050|ref|ZP_20755585.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437439302|ref|ZP_20757242.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437461394|ref|ZP_20762343.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437472121|ref|ZP_20765356.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437489846|ref|ZP_20770628.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437510736|ref|ZP_20776814.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437545750|ref|ZP_20783130.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437549633|ref|ZP_20783432.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437578366|ref|ZP_20791428.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437593563|ref|ZP_20795496.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437606030|ref|ZP_20799564.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437613251|ref|ZP_20801435.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437629131|ref|ZP_20806094.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437662301|ref|ZP_20813437.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437676595|ref|ZP_20817056.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437695021|ref|ZP_20821991.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437718940|ref|ZP_20828588.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437806993|ref|ZP_20839670.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437912319|ref|ZP_20850305.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|437972410|ref|ZP_20852855.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|438083987|ref|ZP_20858237.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438109238|ref|ZP_20867301.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|440763173|ref|ZP_20942219.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440766873|ref|ZP_20945859.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440773572|ref|ZP_20952465.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445130601|ref|ZP_21381410.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|445140263|ref|ZP_21384821.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445153834|ref|ZP_21391527.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445167949|ref|ZP_21394695.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445205047|ref|ZP_21401394.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445234713|ref|ZP_21406779.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445278146|ref|ZP_21410701.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445338171|ref|ZP_21416060.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445344519|ref|ZP_21417695.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445360149|ref|ZP_21423382.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|25325047|pir||AI0830 probable RNA methyltransferase STY2841 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16421198|gb|AAL21542.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16503807|emb|CAD05832.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136422|gb|AAO67988.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62128856|gb|AAX66559.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161361996|gb|ABX65764.1| hypothetical protein SPAB_00327 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194407115|gb|ACF67334.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197211222|gb|ACH48619.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197938347|gb|ACH75680.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199604502|gb|EDZ03047.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205273472|emb|CAR38449.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205321946|gb|EDZ09785.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205327360|gb|EDZ14124.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205336134|gb|EDZ22898.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205340551|gb|EDZ27315.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|206709805|emb|CAR34157.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261247846|emb|CBG25675.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994789|gb|ACY89674.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159199|emb|CBW18714.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312913642|dbj|BAJ37616.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085531|emb|CBY95310.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226003|gb|EFX51056.1| hypothetical tRNA/rRNA methyltransferase yfiF [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322715711|gb|EFZ07282.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|326624419|gb|EGE30764.1| putative RNA methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|332989577|gb|AEF08560.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353077131|gb|EHB42891.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|353587651|gb|EHC46884.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|363549990|gb|EHL34321.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363560943|gb|EHL45074.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363565119|gb|EHL49157.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|374352277|gb|AEZ44038.1| putative tRNA/rRNA methyltransferase yfiF [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|381293473|gb|EIC34630.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381297446|gb|EIC38536.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381297632|gb|EIC38720.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381304499|gb|EIC45483.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381313614|gb|EIC54396.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|392756825|gb|EJA13719.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392764321|gb|EJA21121.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392768672|gb|EJA25419.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392815517|gb|EJA71454.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392829753|gb|EJA85416.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392836408|gb|EJA91991.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392839170|gb|EJA94715.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|395988841|gb|EJH97987.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395992276|gb|EJI01394.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395993459|gb|EJI02554.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395999529|gb|EJI08547.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396002221|gb|EJI11226.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396004726|gb|EJI13708.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396009978|gb|EJI18893.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396019563|gb|EJI28415.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396021044|gb|EJI29877.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396026545|gb|EJI35312.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396033854|gb|EJI42559.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396034729|gb|EJI43415.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036412|gb|EJI45073.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396038779|gb|EJI47413.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396047792|gb|EJI56363.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396058844|gb|EJI67303.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396058936|gb|EJI67394.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396061800|gb|EJI70218.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396063146|gb|EJI71547.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396069155|gb|EJI77495.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396074619|gb|EJI82905.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402518366|gb|EJW25751.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402519846|gb|EJW27205.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527046|gb|EJW34311.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402532598|gb|EJW39789.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414015817|gb|EKS99611.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016921|gb|EKT00674.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414017465|gb|EKT01182.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414030182|gb|EKT13315.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031526|gb|EKT14582.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414045306|gb|EKT27717.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414045390|gb|EKT27794.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050912|gb|EKT33064.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414058081|gb|EKT39789.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414063989|gb|EKT45034.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|434959943|gb|ELL53380.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434963741|gb|ELL56799.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434964646|gb|ELL57644.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434971523|gb|ELL64026.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434978530|gb|ELL70563.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434984156|gb|ELL75917.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434987643|gb|ELL79275.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434997139|gb|ELL88404.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435004191|gb|ELL95184.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435010852|gb|ELM01607.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435011138|gb|ELM01875.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435013264|gb|ELM03918.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435018418|gb|ELM08883.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|435021795|gb|ELM12163.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435025360|gb|ELM15508.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435028756|gb|ELM18816.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435032783|gb|ELM22706.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435034596|gb|ELM24465.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435036188|gb|ELM26010.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435052644|gb|ELM42135.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435053330|gb|ELM42783.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435061487|gb|ELM50714.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435064643|gb|ELM53770.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435068727|gb|ELM57738.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435068915|gb|ELM57925.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435077412|gb|ELM66167.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435082712|gb|ELM71324.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435087847|gb|ELM76320.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095997|gb|ELM84271.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098134|gb|ELM86378.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435098372|gb|ELM86615.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435109579|gb|ELM97526.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435112372|gb|ELN00241.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435116242|gb|ELN03988.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435118113|gb|ELN05794.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435120748|gb|ELN08313.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435131449|gb|ELN18662.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435132019|gb|ELN19220.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435139738|gb|ELN26721.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435140035|gb|ELN27006.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435147238|gb|ELN34017.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435147473|gb|ELN34237.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435151026|gb|ELN37687.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435157907|gb|ELN44329.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435167363|gb|ELN53295.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435171037|gb|ELN56680.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435175010|gb|ELN60438.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435180982|gb|ELN66082.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435186093|gb|ELN70942.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435189447|gb|ELN74081.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435192319|gb|ELN76851.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435199499|gb|ELN83575.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435212696|gb|ELN95665.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435213738|gb|ELN96608.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435220452|gb|ELO02749.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435226353|gb|ELO07931.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435228836|gb|ELO10257.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435231056|gb|ELO12314.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435231878|gb|ELO13023.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435233537|gb|ELO14529.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241839|gb|ELO22159.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435246816|gb|ELO26806.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435251877|gb|ELO31475.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435256299|gb|ELO35608.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435264506|gb|ELO43418.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435267554|gb|ELO46232.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435276332|gb|ELO54344.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435277974|gb|ELO55850.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435283616|gb|ELO61154.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435284751|gb|ELO62179.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435301178|gb|ELO77222.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435317114|gb|ELO90175.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435319744|gb|ELO92534.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435332815|gb|ELP03718.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|435339374|gb|ELP08339.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|436415299|gb|ELP13219.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|436420939|gb|ELP18792.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436421372|gb|ELP19217.1| methyltransferase [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|444851802|gb|ELX76888.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|444851818|gb|ELX76903.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444852289|gb|ELX77369.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444860352|gb|ELX85270.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444861052|gb|ELX85945.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444864710|gb|ELX89499.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444872876|gb|ELX97186.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444880280|gb|ELY04360.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444885240|gb|ELY09039.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444886806|gb|ELY10548.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|168232176|ref|ZP_02657234.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|194472133|ref|ZP_03078117.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194458497|gb|EDX47336.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|205333582|gb|EDZ20346.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|86133500|ref|ZP_01052082.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
gi|85820363|gb|EAQ41510.1| SpoU rRNA methylase family protein [Polaribacter sp. MED152]
Length = 229
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 19/187 (10%)
Query: 1674 KQLLE------IEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTC 1727
K+LLE +K + F +VL R+ + F +V I + N + + RTC
Sbjct: 8 KKLLEYLEGFLTDKRKQTFQKVLAERT----------RHFTVVLEDIYQPHNASAVVRTC 57
Query: 1728 EVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN--SIKHFLERKKHEGFSVLG 1785
++F L + + N ++ + ++ A+KW+ + + K L K G+ ++
Sbjct: 58 DIFGVQDLHVIE-NRYINRVSKYVTKGAQKWITTKRYKTDGDNTKTCLNHLKTAGYQIIA 116
Query: 1786 LEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGA 1845
A++ L + KKT V G E GI + D ++IP +G S N+ V+ A
Sbjct: 117 TSPHADANLLQDFKIDKKTAFVFGAEATGISDTVKEHADGFLKIPMVGFTESFNISVAAA 176
Query: 1846 IALWEYT 1852
I L + T
Sbjct: 177 IILQDVT 183
>gi|194445716|ref|YP_002041915.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|418805617|ref|ZP_13361203.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418814344|ref|ZP_13369862.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418818783|ref|ZP_13374249.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418819156|ref|ZP_13374611.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418829504|ref|ZP_13384480.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418837880|ref|ZP_13392739.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842012|ref|ZP_13396826.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418850200|ref|ZP_13404917.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418856536|ref|ZP_13411179.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|194404379|gb|ACF64601.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|392772044|gb|EJA28749.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392784582|gb|EJA41173.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392784613|gb|EJA41203.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392795463|gb|EJA51833.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392797682|gb|EJA53986.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392804115|gb|EJA60291.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392807762|gb|EJA63830.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392818813|gb|EJA74692.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392819416|gb|EJA75285.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKIVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|418513999|ref|ZP_13080219.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366080762|gb|EHN44723.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDFLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|168238343|ref|ZP_02663401.1| RNA methyltransferase, TrmH family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194735064|ref|YP_002115660.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204929676|ref|ZP_03220750.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|416426751|ref|ZP_11693184.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416430083|ref|ZP_11694847.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416438228|ref|ZP_11699437.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416443904|ref|ZP_11703304.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416450863|ref|ZP_11707818.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416460601|ref|ZP_11714861.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416471097|ref|ZP_11719150.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416481456|ref|ZP_11723252.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489929|ref|ZP_11726520.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416499208|ref|ZP_11730681.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416503906|ref|ZP_11732913.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416514866|ref|ZP_11738429.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416546047|ref|ZP_11753602.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416560836|ref|ZP_11761391.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416569993|ref|ZP_11765806.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416580989|ref|ZP_11772286.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416583174|ref|ZP_11773140.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416591247|ref|ZP_11778290.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416602885|ref|ZP_11785501.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604628|ref|ZP_11786310.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416614021|ref|ZP_11792423.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416625058|ref|ZP_11798422.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416627069|ref|ZP_11798990.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416644618|ref|ZP_11806900.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416648825|ref|ZP_11809411.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416658696|ref|ZP_11814419.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416668465|ref|ZP_11818910.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416677592|ref|ZP_11822290.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416695117|ref|ZP_11827548.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416707845|ref|ZP_11832885.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416711347|ref|ZP_11835127.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416720659|ref|ZP_11842293.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416722345|ref|ZP_11843338.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416734056|ref|ZP_11850760.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416736651|ref|ZP_11852183.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416743392|ref|ZP_11856118.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416755582|ref|ZP_11862126.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416761085|ref|ZP_11865252.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416770907|ref|ZP_11872224.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418482509|ref|ZP_13051524.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418489985|ref|ZP_13056542.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418494091|ref|ZP_13060548.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418498843|ref|ZP_13065255.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418503267|ref|ZP_13069634.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507510|ref|ZP_13073831.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418525878|ref|ZP_13091857.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|452123545|ref|YP_007473793.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|194710566|gb|ACF89787.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197288803|gb|EDY28176.1| RNA methyltransferase, TrmH family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|204321395|gb|EDZ06595.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|322613365|gb|EFY10307.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620431|gb|EFY17296.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625101|gb|EFY21930.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629455|gb|EFY26231.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633842|gb|EFY30581.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635448|gb|EFY32159.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322639876|gb|EFY36555.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644238|gb|EFY40782.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649930|gb|EFY46350.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654887|gb|EFY51204.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658185|gb|EFY54451.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322661743|gb|EFY57961.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669724|gb|EFY65870.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673269|gb|EFY69374.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322674942|gb|EFY71029.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682965|gb|EFY78983.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685626|gb|EFY81621.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323191946|gb|EFZ77184.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200421|gb|EFZ85502.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201320|gb|EFZ86387.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323211534|gb|EFZ96372.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215965|gb|EGA00697.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221746|gb|EGA06154.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225646|gb|EGA09873.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229364|gb|EGA13488.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235321|gb|EGA19405.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237493|gb|EGA21556.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245248|gb|EGA29249.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246473|gb|EGA30454.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253996|gb|EGA37818.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259046|gb|EGA42694.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261969|gb|EGA45534.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267752|gb|EGA51233.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269689|gb|EGA53141.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|363558904|gb|EHL43092.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363564923|gb|EHL48963.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363574365|gb|EHL58233.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575954|gb|EHL59797.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366062781|gb|EHN27008.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366062982|gb|EHN27203.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366068239|gb|EHN32385.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366072910|gb|EHN36991.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366073614|gb|EHN37683.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366081220|gb|EHN45170.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366829242|gb|EHN56119.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205865|gb|EHP19370.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|451912549|gb|AGF84355.1| methyltransferase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 345
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDFLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|418827343|ref|ZP_13382493.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392799850|gb|EJA56096.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 274
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 121 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 180
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 181 PITG---ESIVDVLDDFRQAGYTVV-TTSSDRGQALFSTTLPEKIVLVLGREYDYLPEAA 236
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 237 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 273
>gi|429745851|ref|ZP_19279236.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429167724|gb|EKY09615.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 180
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 P--IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGI 1815
VE ++++ E+ K +G ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AWEYVENTLSAV----EKLKEQGVYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 135 EQEVVSASDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|110004177|emb|CAK98515.1| putative trna/rrna methyltransferase protein [Spiroplasma citri]
Length = 244
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 1676 LLEIEKEDELFDQVL--QARSLAMETIRA--SRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
L++ K L ++ Q SLA T +A ++ F+LV I N + RTC++F
Sbjct: 61 LVQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFN 120
Query: 1732 ASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTA 1790
G+ I D + + S A +VP+ V N++ + +E K +GF +
Sbjct: 121 VDGVIILDKRQVDINATVAKTSAGAFNYVPVCRV--NNLTNAIEYLKKQGFWIYATSLNT 178
Query: 1791 NSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ + + + L++G E GI ++ D I IP G + SLNV V+ AI +++
Sbjct: 179 KAQNVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQ 238
Query: 1851 YTRQQR 1856
Q+
Sbjct: 239 IKMLQQ 244
>gi|344201379|ref|YP_004786522.1| tRNA/rRNA methyltransferase SpoU [Muricauda ruestringensis DSM 13258]
gi|343953301|gb|AEM69100.1| tRNA/rRNA methyltransferase (SpoU) [Muricauda ruestringensis DSM
13258]
Length = 217
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
++ ++ + + + ++ N + + R+C+VF + + + N + + I++ AE
Sbjct: 23 LDVLQQRTKHITVAVEDVYQLHNTSAIIRSCDVFGVQDVHVIE-NRFGKRLDKNIAMGAE 81
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
+WV + + + + K +G+ ++ +S L + +K+ L G EKEG+
Sbjct: 82 QWVDVYRYQTTA--DCISKLKKDGYQIIATTPHTDSTLLPNFFPLQKSALFFGTEKEGLS 139
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D ++IP +G SLNV VS AI + + ++ R
Sbjct: 140 DEVMQQADGFLKIPMVGFSESLNVSVSAAIIIQQLAQKVR 179
>gi|145219814|ref|YP_001130523.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeovibrioides DSM
265]
gi|145205978|gb|ABP37021.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeovibrioides DSM
265]
Length = 232
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 1693 RSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGL-AIADANILHDKQFQL 1750
R L ++ + ASRQ +V +++ NL+ + R+C+ L A++ +H Q
Sbjct: 6 RFLRIKKMLASRQPDLTVVMDNVNKPHNLSAIIRSCDAVGIHDLYAVSSKKSIHTTQNA- 64
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
+ A +W + I + EG VL T S F T +VLG
Sbjct: 65 -AAGAGRWTNLH--LRKDIGTLCRKLGMEGMQVLAATNTEESRDFRTIDFTLPTAIVLGA 121
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E EG+ + I D I IP G+V SLNV V+ A+ L+E RQ+
Sbjct: 122 EWEGVSAEAIQAADMAITIPMYGMVESLNVSVAAALILFEAERQR 166
>gi|383450622|ref|YP_005357343.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380502244|emb|CCG53286.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 166
Score = 60.8 bits (146), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 1704 RQQFVLVASLIDRI---PNLAGLARTCEVFKASGLAIADAN-ILHDKQFQLISVTAEKWV 1759
+QQF + + D I N+ + R C+ F + ++ N I +++ S + K V
Sbjct: 12 KQQFPITV-ICDGIYFQENIGSVFRLCDAFGVKDIVLSGKNLIFSERKINKTSRSTHKTV 70
Query: 1760 PIV-----EVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREK 1812
P E ++ IK E+ +LG+E T NSIPL+++ F KKT L++G E
Sbjct: 71 PYTIIYDKEKLISFIKSNFEQ-------ILGIEITNNSIPLNKFEFDSSKKTALIIGSEV 123
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
GI ++++ I IP G+ S+NV + +I L+ +T++
Sbjct: 124 VGISDELLNCCQNTIHIPMHGINSSMNVTHALSIVLYTFTQK 165
>gi|195952691|ref|YP_002120981.1| TrmH family RNA methyltransferase [Hydrogenobaculum sp. Y04AAS1]
gi|195932303|gb|ACG57003.1| RNA methyltransferase, TrmH family, group 3 [Hydrogenobaculum sp.
Y04AAS1]
Length = 251
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
E+ELF + ++ + FV++ + D N+ +ART EVF GL I
Sbjct: 85 EEELFRKTIEEKGF-----------FVVLDHITDP-QNVGSIARTVEVFGGIGLLIPK-- 130
Query: 1742 ILHDKQFQLISVTAEK------WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPL 1795
D+ + +V + + I + P SI ++ K G V LE+ I
Sbjct: 131 ---DRSAPINAVVVKSSSGAIFHLKISKTP--SISKAIKTFKEMGGWVYALEKGGKDITK 185
Query: 1796 DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ +P +VLG E EG+ +++ D + IP G V SLNV +GAI LWE + Q
Sbjct: 186 VDFAYP--MCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQ 243
>gi|424841305|ref|ZP_18265930.1| rRNA methylase [Saprospira grandis DSM 2844]
gi|395319503|gb|EJF52424.1| rRNA methylase [Saprospira grandis DSM 2844]
Length = 172
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFPKK--TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+ V +EQT S L+Q+++ + L+ G E +G+ +++ ++D IEIPQ G S
Sbjct: 92 GYKVYAVEQTFGSHSLEQFVWAAQEGIALIFGNEVKGVDAELLPLVDGAIEIPQFGSKHS 151
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV VS + LWE RQ
Sbjct: 152 LNVSVSMGVLLWEMRRQ 168
>gi|345304477|ref|YP_004826379.1| tRNA/rRNA methyltransferase SpoU [Rhodothermus marinus SG0.5JP17-172]
gi|345113710|gb|AEN74542.1| tRNA/rRNA methyltransferase (SpoU) [Rhodothermus marinus
SG0.5JP17-172]
Length = 261
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
A+ Q E+ + +QVL R+ + V V + N++ + R+ E
Sbjct: 46 AWLQPYVTERRRQRIEQVLDGRTYTV----------VPVVEGLANTGNVSAVMRSAEALG 95
Query: 1732 ASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLG--LEQT 1789
G I + K + + A+KW+ + P + + K G+ ++ LE+
Sbjct: 96 YQGFGIIKGQVQKYKTSERTTQGADKWLDVWTWPTAA--EAVPALKAAGYRIVATALEEA 153
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
P+D + F T LV G E EG+ +++ M DA IP +G +S N+ V+ AIAL+
Sbjct: 154 D---PIDTFDFTVPTALVFGNEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALY 210
Query: 1850 EYTRQQ 1855
R +
Sbjct: 211 HAQRDR 216
>gi|300722282|ref|YP_003711566.1| tRNA /rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297628783|emb|CBJ89361.1| putative tRNA/rRNA methyltransferase [Xenorhabdus nematophila ATCC
19061]
Length = 357
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 1694 SLAMETI--RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI 1751
L +ET +A + VL + NL + R+C F G+ + D +L +
Sbjct: 194 GLGVETYLQQAPAKDCVLALENVGNPHNLGAIMRSCAHFGVQGVVLQDTAML---ESGAA 250
Query: 1752 SVTAEKWVP-IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
TAE I + + L + ++EG++++ S L Q P+K VLVLG+
Sbjct: 251 VRTAEGGAEHIKGIDADGFTDTLNKFRNEGYTIVTTSSHKGSTALAQATLPEKMVLVLGQ 310
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E +G+ I D + I G V SLNV V+ I L E+ RQ +
Sbjct: 311 ESDGLSDSIWEDGDIRLSIGGTGRVESLNVSVATGILLAEWWRQNK 356
>gi|357632632|ref|ZP_09130510.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. FW1012B]
gi|357581186|gb|EHJ46519.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. FW1012B]
Length = 196
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 1703 SRQQ--FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLI----SVTA 1755
SR+Q LV + I N++ + R+C+ F I ++L+ D F + S +A
Sbjct: 18 SRRQTDLTLVINNIHDPHNVSAILRSCDAF-----GIHRVHLLYTDTAFPALGKKSSGSA 72
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
+KWV + P K +G++++ + + PL + K ++LG E G+
Sbjct: 73 KKWVETIRHP--DAASLAASLKGQGYTLVATLCSETARPLQDWDLTGKVAIILGNEHRGV 130
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D+ +D + IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 131 DEDLAPHVDGALYIPMQGMVQSLNVSVAAAVILYEGFRQR 170
>gi|237756237|ref|ZP_04584798.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691595|gb|EEP60642.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 248
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
E+E+ D+ ++ + + +L+ I N+ + RT E+F SG+ I
Sbjct: 83 ENEIIDKTIKEKGI------------MLILDHITDPQNVGSILRTAEIFGVSGVIIPKER 130
Query: 1742 ILHDKQFQLISVTAEKW-VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+ + + T + +PI +V S+++ +E+ K +G V+ +E+ +I + F
Sbjct: 131 SSPINEVVIKASTGAVFHLPIAKV--GSLRNVIEKFKKKGGWVVAVEKGGRNIA--EIDF 186
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P LV+G E +G+ I+ D IP +G + SLNV + +IALWE +++
Sbjct: 187 PYPIALVVGSEGKGVSKSILEEADIIATIPMVGKITSLNVSNATSIALWELFKRR 241
>gi|224373768|ref|YP_002608140.1| tRNA guanosine-2'-O-methyltransferase [Nautilia profundicola AmH]
gi|223589277|gb|ACM93013.1| tRNA guanosine-2'-O-methyltransferase [Nautilia profundicola AmH]
Length = 209
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 1689 VLQARSLAMETIRASRQQFVLVASLIDRI---PNLAGLARTCEVFKASGLAIADANILHD 1745
V + R M+ I +RQ + V +D + NL+ + RTC+ L H
Sbjct: 4 VSEERLEKMKNILNTRQNTLRV--FMDYVFSSHNLSAIVRTCDAVNVGKLYYR-----HQ 56
Query: 1746 KQFQL---ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
++ +L I++ A KW I V I+ F + K EG+ V+ ++ + + K
Sbjct: 57 RKVRLNNDITMGAHKW--IFHEYVEDIEEFYKNIKKEGYQVVVTLLDEETVDFREVDYTK 114
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
T++VLG E +G I D + IP G+ +SLNV V+ A+ L+E RQ+
Sbjct: 115 PTLIVLGNEVDGASDISIKYADKKVIIPMYGMSQSLNVSVANAVILYEAQRQR 167
>gi|407005510|gb|EKE21604.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 164
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+K ++ A+K+VP +V S+ +++ K E F ++ LEQ NS+ ++ K
Sbjct: 55 EKMLSKTALGADKYVPWEKVV--SVSRVIDKLKKENFQIIALEQNENSVDYRKFKPKDKI 112
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
VL++G E GI I+ D +E+P G +SLNV V+ IA ++ T +
Sbjct: 113 VLIVGNEPRGIDKRILKKCDIIMELPMRGQKQSLNVAVALGIAGYKLTEE 162
>gi|294815551|ref|ZP_06774194.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|326443902|ref|ZP_08218636.1| putative tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294328150|gb|EFG09793.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
Length = 179
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 1691 QARSLAMETIRAS--RQQFVLVASLIDRIP---NLAGLARTCEVFKASGLAIA-DANILH 1744
Q R ++ + S RQ VA L++ + N+ + RT L +A +
Sbjct: 3 QLRGTELKRLHRSWKRQSSAEVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPR 62
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+ + Q I + ++++ + ++ +ER + +G+ ++GLE ++PL + T
Sbjct: 63 NAKAQKICMGTDRYLDVQTF--ETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGAT 120
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ +G E GI + M DA IPQLG V SLNV + A+A +E RQ
Sbjct: 121 CIAVGNEDHGISPQALGMCDAVAFIPQLGRVGSLNVATALAVACYEVRRQ 170
>gi|254391080|ref|ZP_05006288.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|197704775|gb|EDY50587.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
Length = 182
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 1691 QARSLAMETIRAS--RQQFVLVASLIDRIP---NLAGLARTCEVFKASGLAIA-DANILH 1744
Q R ++ + S RQ VA L++ + N+ + RT L +A +
Sbjct: 6 QLRGTELKRLHRSWKRQSSAEVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPR 65
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+ + Q I + ++++ + ++ +ER + +G+ ++GLE ++PL + T
Sbjct: 66 NAKAQKICMGTDRYLDVQTF--ETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGAT 123
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ +G E GI + M DA IPQLG V SLNV + A+A +E RQ
Sbjct: 124 CIAVGNEDHGISPQALGMCDAVAFIPQLGRVGSLNVATALAVACYEVRRQ 173
>gi|379731085|ref|YP_005323281.1| putative SpoU rRNA methylase family protein [Saprospira grandis str.
Lewin]
gi|378576696|gb|AFC25697.1| putative SpoU rRNA methylase family protein [Saprospira grandis str.
Lewin]
Length = 179
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFPKK--TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+ V +EQT S L+Q+++ + L+ G E +G+ +++ ++D IEIPQ G S
Sbjct: 99 GYKVYAVEQTFGSHSLEQFVWSAQEGIALIFGNEVKGVDAELLPLVDGAIEIPQFGSKHS 158
Query: 1838 LNVHVSGAIALWEYTRQ 1854
LNV VS + LWE RQ
Sbjct: 159 LNVSVSMGVLLWEMRRQ 175
>gi|320108702|ref|YP_004184292.1| TrmH family RNA methyltransferase [Terriglobus saanensis SP1PR4]
gi|319927223|gb|ADV84298.1| RNA methyltransferase, TrmH family, group 3 [Terriglobus saanensis
SP1PR4]
Length = 263
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 1691 QARSLAMETIRA-----SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
+ R+LA+E + A +++F L ++ NL L RT + G+ + +
Sbjct: 75 ERRALAVEDLLAVQKPDGQRRFFLALDGVEDPHNLGALLRTADGAGVDGILLPER----- 129
Query: 1746 KQFQLISVTAEKWVPIVE----VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
+ + +V A+ E V ++ LER K + V+GL++ D P
Sbjct: 130 RSAPITAVVAKTSAGATEHVRIAKVTNLVRALERMKKDNIWVIGLDERGTPDYTDFDFAP 189
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
VLVLG E G+ + D + IP G V SLNV V+GA+ ++E RQ+R
Sbjct: 190 TDCVLVLGSEGAGLHDLVKKTCDYLLRIPMAGGVSSLNVSVAGAVVMYEVARQRR 244
>gi|303236426|ref|ZP_07323015.1| RNA methyltransferase, TrmH family [Prevotella disiens FB035-09AN]
gi|302483398|gb|EFL46404.1| RNA methyltransferase, TrmH family [Prevotella disiens FB035-09AN]
Length = 186
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 15/177 (8%)
Query: 1688 QVLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+ ++ L++E + SR+ ++V + + N+ + R+ + F+ + + +
Sbjct: 5 RTIEMNRLSLEEFKQSRKMPLIVVLDDVRSLHNVGSVFRSSDAFRVEAIYLCGITATPPN 64
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD---QYMFP- 1801
+ ++ AE V P + + +E+ K G+ V +EQ S L Q + P
Sbjct: 65 AEIHKTALGAEDSVDWQYFP--TTEEAIEQLKANGYYVYSVEQVEGSTKLQTLSQQVAPI 122
Query: 1802 -------KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
K+ +VLG E +G+ ++ + D C+EIPQ G SLNV V+ I +WE+
Sbjct: 123 TSEQTSEKRYAVVLGNEVKGVKQSVVDLSDNCLEIPQFGTKHSLNVSVTAGIVIWEF 179
>gi|429750961|ref|ZP_19283943.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429163185|gb|EKY05433.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 220
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLAIADANILHDKQFQLISV 1753
+E I F + + ++ N + + RTCEVF +A + L +K I++
Sbjct: 20 LEIISQRTNHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIEGRYGKRLDEK----IAM 75
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A+KWV + + + ++ + +G+ ++ ++ L+ + KK+ G EKE
Sbjct: 76 GAQKWVDVFRY--DDTQKCIDILREKGYQIVATTPHKDAYLLNDFDISKKSAFFFGTEKE 133
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 134 GLSEKVLAQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 176
>gi|163754906|ref|ZP_02162027.1| RNA methylase, SpoU family protein [Kordia algicida OT-1]
gi|161324973|gb|EDP96301.1| RNA methylase, SpoU family protein [Kordia algicida OT-1]
Length = 171
Score = 60.8 bits (146), Expect = 8e-06, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 1709 LVASLIDRIPNLAGLARTCEVFKASGLAIADANI-LHDKQFQLISVTAEKWVPIVEVPVN 1767
LV+ + PN+ L R C+ F + NI + ++ S EK VP E+ +
Sbjct: 20 LVSDQVSNAPNIGSLFRICDAFGVEKIIFCGDNIPVFGRRMTKTSRATEKVVPF-EITTD 78
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDA 1825
I + + K G++++ LE T NS + F K K LV+G E G+ + I+ D
Sbjct: 79 -IHAVVSKLKDHGYTIISLEITENSQSIHTIDFSKYEKIALVIGDENFGVNPETIYESDV 137
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I G S+NV + I L+E TRQ
Sbjct: 138 VMHIDMFGQNSSMNVVQATNIVLYEITRQH 167
>gi|365971681|ref|YP_004953242.1| hypothetical protein EcWSU1_03393 [Enterobacter cloacae EcWSU1]
gi|365750594|gb|AEW74821.1| YfiF [Enterobacter cloacae EcWSU1]
Length = 365
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 230 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLDAIEQFR 286
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
+ G++++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 287 NAGYAIVTTSSHA-ATPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 345
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 346 LNVSVATGVLLAEWWRQNK 364
>gi|303327802|ref|ZP_07358242.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. 3_1_syn3]
gi|302862163|gb|EFL85097.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio sp. 3_1_syn3]
Length = 239
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKAS 1733
K+++ + KE + R+ +E +R + LV + I N++ + R+C+ F S
Sbjct: 39 KEVISMPKEP-----TPRRRARLLEVLRHRQNDLTLVLANIHDPHNVSAIYRSCDAFGLS 93
Query: 1734 GLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSI 1793
+ + N + S +A KWV E NS + + +GF VL + +
Sbjct: 94 KVHLYYTNTPFPTLGRKTSASARKWVE-SERHKNSAD-LMRTLRGQGFQVLATSCSETAR 151
Query: 1794 PLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
PL + F + T +++G E G+ +++ + D + IP G+++S NV V+ AI L E R
Sbjct: 152 PLRDWDFIRPTAVIMGNEHSGVEEELLSLADGQLYIPMYGMIQSFNVSVAAAIILAEAAR 211
Query: 1854 QQ 1855
Q+
Sbjct: 212 QR 213
>gi|429757070|ref|ZP_19289627.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429169717|gb|EKY11458.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 220
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVF---KASGLA 1736
E+ E F QV+ R+ F + + ++ N + + RTCEVF +A +
Sbjct: 15 EERKERFLQVISVRT----------NHFTVAMEDVFQMHNTSAVVRTCEVFGVQQAHSIE 64
Query: 1737 IADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD 1796
+ K I++ A+KWV + N + ++ + +G+ ++ ++ L+
Sbjct: 65 GRFGKRIDAK----IAMGAQKWVDVFRY--NDTQSCIDTLRAQGYQIVATTPHKDAYFLN 118
Query: 1797 QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ KK+ G EKEG+ ++ D ++IP +G SLN+ V+ AI L + T + R
Sbjct: 119 DFDISKKSAFFFGTEKEGLSEQVLSQADTYLKIPMVGFTESLNISVAVAIVLQQLTDKLR 178
>gi|126663147|ref|ZP_01734145.1| putative SpoU rRNA methylase family protein [Flavobacteria bacterium
BAL38]
gi|126624805|gb|EAZ95495.1| putative SpoU rRNA methylase family protein [Flavobacteria bacterium
BAL38]
Length = 175
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K E V +EQT N+I LD + T L+ G E +G+ + I++ D IEIPQLG
Sbjct: 94 KQENVKVYSVEQTENAIMLDDFQPETNTKYALIFGNEVKGVSQEAINLSDGVIEIPQLGS 153
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
SLN+ VS I +W+ ++ +
Sbjct: 154 KHSLNISVSAGIVIWDLFQKMK 175
>gi|452943525|ref|YP_007499690.1| RNA methyltransferase, TrmH family, group 3 [Hydrogenobaculum sp. HO]
gi|452881943|gb|AGG14647.1| RNA methyltransferase, TrmH family, group 3 [Hydrogenobaculum sp. HO]
Length = 251
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 17/175 (9%)
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA-DA 1740
E+ELF + ++ + F V I N+ +ART EVF GL I D
Sbjct: 85 EEELFRKTIKEKG------------FFAVLDHITDPQNVGSIARTVEVFGGIGLLIPKDR 132
Query: 1741 NILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+ + S A + I + P SI L+ K G V LE+ I + +
Sbjct: 133 SAPINATVVKSSSGAIFHLKISKTP--SISKALKTFKEMGGWVYALEKGGKDITEVDFAY 190
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P +VLG E EG+ +++ D + IP G V SLNV +GAI LWE + Q
Sbjct: 191 P--MCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKHQ 243
>gi|423141222|ref|ZP_17128860.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Salmonella enterica subsp. houtenae str. ATCC BAA-1581]
gi|379053776|gb|EHY71667.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Salmonella enterica subsp. houtenae str. ATCC BAA-1581]
Length = 345
Score = 60.5 bits (145), Expect = 9e-06, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRRAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDFLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|373956480|ref|ZP_09616440.1| tRNA/rRNA methyltransferase (SpoU) [Mucilaginibacter paludis DSM
18603]
gi|373893080|gb|EHQ28977.1| tRNA/rRNA methyltransferase (SpoU) [Mucilaginibacter paludis DSM
18603]
Length = 177
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 1693 RSLAMETI-RASRQQF-----VLVASLIDRI---PNLAGLARTCEVFKASGLAIADANIL 1743
R L ++ + RAS +F + VA ++D + N+ + RT + F + + L
Sbjct: 2 RKLKLDELNRASVDEFKAQDKLPVAVVLDNVRSLHNVGSIFRTSDAFAVEQICLCGITGL 61
Query: 1744 H-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY--MF 1800
+++ + ++ A + V P S + + + +G+ ++ +EQ +S L+Q+ +
Sbjct: 62 PPNREIEKTALGATQSVNWKHYP--STLDAIHQLRVDGYLIIAIEQAVDSTMLNQFEPIP 119
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
+K L+ G E G+ +++ +D CIEIPQ G S N+ VS I LW++
Sbjct: 120 GEKYALIFGNEVNGVADEVMEQIDGCIEIPQFGTKHSFNIVVSAGIILWDF 170
>gi|269121680|ref|YP_003309857.1| TrmH family RNA methyltransferase [Sebaldella termitidis ATCC 33386]
gi|268615558|gb|ACZ09926.1| RNA methyltransferase, TrmH family, group 3 [Sebaldella termitidis
ATCC 33386]
Length = 234
Score = 60.5 bits (145), Expect = 9e-06, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVT-A 1755
+E + A ++ VLV I N + R+ E F G+ I D N + + + S T A
Sbjct: 78 LEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETVVKSSTGA 137
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
+ V I++V ++ +++ K G+ + G E + ++ FP+K LVLG E +G+
Sbjct: 138 IEHVDIIKV--TNVSDSMDKLKKYGYFIYGAEADGETEYYNE-PFPEKLCLVLGSEGKGM 194
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D + IP G + SLNV V+ I L E ++ +
Sbjct: 195 RKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISKNK 234
>gi|440286539|ref|YP_007339304.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
gi|440046061|gb|AGB77119.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
Length = 352
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F GL + DA +L + AE PI +S L+ +
Sbjct: 217 NLGAMMRSCAHFGIKGLLLQDAGVLESGAAIRTAEGGAEHVQPITG---DSFIDALDDFR 273
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ A + PL + PKK VLVLG+E++G+ + D + I G V S
Sbjct: 274 KAGYAIVTTSSHAGT-PLFKAELPKKMVLVLGQERDGLSDAALSSADLSVSIDGTGAVES 332
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 333 LNVSVATGVLLSEWWRQNK 351
>gi|172037390|ref|YP_001803891.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|354553728|ref|ZP_08973034.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
gi|171698844|gb|ACB51825.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|353554445|gb|EHC23835.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
Length = 219
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ----FQLISV 1753
E + + ++ + + NL+ + RTC+ + I D + ++ F +S
Sbjct: 13 EVLEKRQPDLTVLTEDVHKPHNLSAIIRTCD-----AVGILDVHSINTTDEFPTFSQVSQ 67
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
++KW+ + P +I+ + K + F + T S+ + + T L+LG EK
Sbjct: 68 GSDKWIFLHTHP--NIQTAINHLKSKKFKIYAAHLTDKSVDYRDIDYTQPTALLLGAEKW 125
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ + ++D I IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 126 GVSEEAASLVDGHIIIPMLGMVQSLNVSVAAAVILFEAQRQR 167
>gi|197334204|ref|YP_002154872.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
gi|197315694|gb|ACH65141.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
Length = 229
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI---SVTAE 1756
++A + L + + N++ + RT + A+G+ A + +Q Q++ S A
Sbjct: 13 LKARQTDLTLCLEEVHKANNVSAIVRTAD---ATGIHKIHA-VWPTEQMQMLGHTSAGAR 68
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
WV VE N I+ K +G +L + ++ + + K T ++LG EK GI
Sbjct: 69 NWVD-VETHKN-IEDAFATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGIS 126
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ M D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 127 KKALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQR 165
>gi|397904504|ref|ZP_10505414.1| FIG011178: rRNA methylase [Caloramator australicus RC3]
gi|397162459|emb|CCJ32748.1| FIG011178: rRNA methylase [Caloramator australicus RC3]
Length = 253
Score = 60.5 bits (145), Expect = 9e-06, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
RA + FV++A + NL + RT + A L I + L S
Sbjct: 98 RADLKDFVVIADGVQDPGNLGTIIRTLDAAGADALIIIKGTVDPYNSKTLRSTMGS---- 153
Query: 1761 IVEVPVNSIKHFLERK---KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
I VP+ F + K++GF++ A + D Y F +KT LV+G E GI
Sbjct: 154 IFRVPIVYFDDFEKASDYLKNKGFNIYATSLEAEKLIYD-YNFNEKTALVIGNEANGISK 212
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I + I+IP +G SLN V+ AI ++E RQ+
Sbjct: 213 EHIELSTHKIKIPMIGKAESLNAAVASAIVIYEVVRQR 250
>gi|372277005|ref|ZP_09513041.1| putative methyltransferase [Pantoea sp. SL1_M5]
Length = 393
Score = 60.5 bits (145), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + VL + NL + R+C F GL + DA++L TAE
Sbjct: 241 QANNKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 297
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + LE + G++++ + PL Q P+K VLVLG+E+EG+
Sbjct: 298 HVQAISGATFSEGLEAFRKAGYTIV-TTSSHQGTPLAQAQLPEKMVLVLGQEREGLSDTA 356
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 357 FKQGDMSLSIGGTGNVESLNVSVATGVLLAEWWRQ 391
>gi|20808975|ref|NP_624146.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
gi|20517641|gb|AAM25750.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
Length = 210
Score = 60.5 bits (145), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANILHDKQFQLISVT 1754
E ++ ++ V+ + N + + RTC+ V + + A I + + +S+
Sbjct: 18 EVLQKRQKDLVVFVDDVTNEHNFSAILRTCDAVGVMRVYYFSEAKKGIEIN---EAVSMA 74
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
A +W+ +E + K E K+ E V+ +S + + K T+LV+G E +G
Sbjct: 75 ANRWL-FIERVYDREKAIKEIKERENLQVVVTWLDESSKDFREINYTKPTLLVVGNELKG 133
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ DI+++ D I IP +G+V+SLNV V+ I L+E RQ+
Sbjct: 134 VSEDILNLADERIVIPMMGMVQSLNVSVATGIILYEALRQR 174
>gi|218297230|ref|ZP_03497886.1| tRNA guanosine-2'-O-methyltransferase [Thermus aquaticus Y51MC23]
gi|218242423|gb|EED08963.1| tRNA guanosine-2'-O-methyltransferase [Thermus aquaticus Y51MC23]
Length = 194
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDK----QFQLISVTAEKWVPIVEVPVN--SIKHF 1772
NL+ + RTC+ + I A+ ++ F S + KWV + P + +H
Sbjct: 35 NLSAILRTCD-----AVGILQAHAVNPTGGVPTFNETSGGSHKWVYLEVHPTTEAAFRHL 89
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQL 1832
ER GFSV + + + + T +VLG EK G+ + + + D I IP L
Sbjct: 90 RER----GFSVYATALKEGARDYREVDYTRPTAIVLGAEKWGVSEEALALADGLIHIPML 145
Query: 1833 GVVRSLNVHVSGAIALWEYTRQQ 1855
G+V+SLNV V+ A+ L+E RQ+
Sbjct: 146 GMVQSLNVSVAAAVILFEAQRQR 168
>gi|288818710|ref|YP_003433058.1| rRNA methylase [Hydrogenobacter thermophilus TK-6]
gi|384129460|ref|YP_005512073.1| TrmH family RNA methyltransferase [Hydrogenobacter thermophilus TK-6]
gi|288788110|dbj|BAI69857.1| rRNA methylase [Hydrogenobacter thermophilus TK-6]
gi|308752297|gb|ADO45780.1| RNA methyltransferase, TrmH family, group 3 [Hydrogenobacter
thermophilus TK-6]
Length = 240
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 20/242 (8%)
Query: 1613 ESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLPKHENQDNSSSSFFGNREA 1672
E+L+ G+D + D ++L K+ + QK +P+ + ++ + + A
Sbjct: 11 EALRSGKDIEKVLVAHDSHPPYQVAKLCKERGVKIQK---VPRAKIEELAGTKKTQGILA 67
Query: 1673 YKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKA 1732
+ +ELF L+ S F+LV + N+ L RTCEV
Sbjct: 68 IISPINYVSSNELFKDALKKNS------------FILVLDHLTDPQNVGNLLRTCEVLGG 115
Query: 1733 SGLAIADANILHDKQFQLISVTAEKW-VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTAN 1791
G + Q + + + + I +VP S+ L+ K +G V+ +E+
Sbjct: 116 VGALLPTHRSSPINQVVVKASAGSVFHLKISKVP--SLSKALKDFKKQGGWVISVERGGK 173
Query: 1792 SIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEY 1851
I P LVLG E EG+ ++ + D + IP +G + SLNV +GAIA+WE
Sbjct: 174 DIRYTSIPLP--CALVLGSEGEGVSKSLLEISDLVLSIPMVGKINSLNVSSAGAIAMWEC 231
Query: 1852 TR 1853
R
Sbjct: 232 VR 233
>gi|429725837|ref|ZP_19260653.1| RNA methyltransferase, TrmH family [Prevotella sp. oral taxon 473
str. F0040]
gi|429148740|gb|EKX91741.1| RNA methyltransferase, TrmH family [Prevotella sp. oral taxon 473
str. F0040]
Length = 180
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG+ V +EQ S L + ++ LV+G E G+ +++ D IEIPQ+G
Sbjct: 95 KKEGYVVASVEQCHRSTLLTDFQLDDTQRYALVMGHEVHGVAQEVVDASDLVIEIPQMGT 154
Query: 1835 VRSLNVHVSGAIALWEYTRQQR 1856
S+NV V+ + +WE+ RQ R
Sbjct: 155 KHSMNVSVAAGVVIWEFVRQWR 176
>gi|359419680|ref|ZP_09211629.1| putative RNA methyltransferase [Gordonia araii NBRC 100433]
gi|358244410|dbj|GAB09698.1| putative RNA methyltransferase [Gordonia araii NBRC 100433]
Length = 317
Score = 60.5 bits (145), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 25/167 (14%)
Query: 1702 ASRQQFVLVASLIDRIP---NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKW 1758
AS Q +LVA +D I NL + R+ F G+ I Q + SVTA W
Sbjct: 162 ASGQPPLLVA--LDNITDPRNLGAVIRSVAAFGGHGVLIP--------QRRSASVTAVAW 211
Query: 1759 ---------VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+P+ + P ++ L+ G ++GL+ T ++ LD+Y TV+V+G
Sbjct: 212 RTSAGAAARLPVAQAP--NLTRTLKDWAKAGAQIVGLD-TEGAVSLDEYDGTGPTVIVVG 268
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E +G+ + D+ + IP G V SLN V+ + L E+ RQ+R
Sbjct: 269 SEGKGLSRLVRETCDSVLSIPMAGDVESLNASVAAGVVLAEFARQRR 315
>gi|381403589|ref|ZP_09928273.1| putative methyltransferase [Pantoea sp. Sc1]
gi|380736788|gb|EIB97851.1| putative methyltransferase [Pantoea sp. Sc1]
Length = 390
Score = 60.5 bits (145), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + VL + NL + R+C F GL + DA++L TAE
Sbjct: 238 QANAKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 294
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + LE + G++++ + PL Q P+K VLVLG+E+EG+
Sbjct: 295 HVQAISGATFSEGLEAFRKAGYTIV-TTSSHQGTPLAQAELPEKMVLVLGQEREGLSDTA 353
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 354 FQQGDMSVSIGGTGNVESLNVSVATGVLLAEWWRQ 388
>gi|293190410|ref|ZP_06608842.1| RNA methyltransferase, TrmH family [Actinomyces odontolyticus F0309]
gi|292820994|gb|EFF79949.1| RNA methyltransferase, TrmH family [Actinomyces odontolyticus F0309]
Length = 243
Score = 60.5 bits (145), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 1693 RSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF 1748
R M+ IRA F + +D N+ + RT A+ + +++ K++
Sbjct: 77 RYWTMDAIRADIAARSLPFEVAVENLDHDFNIGSIVRT-----ANAMGARRVHVVGRKRW 131
Query: 1749 -QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ ++ ++++P+ P ++ +E EG +++G++ S+ L+ + P++ LV
Sbjct: 132 NRRGAMVTDRYLPVDHRP--EVRELVEHCSKEGLTLVGVDNVEGSVALEGAVLPERACLV 189
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ ++I D + I Q G RS+NV + AI +W + +
Sbjct: 190 FGSEASGLSEEMIRACDIVVAITQRGSTRSMNVGHAAAIVMWAHASR 236
>gi|71280430|ref|YP_267533.1| RNA methyltransferase [Colwellia psychrerythraea 34H]
gi|71146170|gb|AAZ26643.1| RNA methyltransferase, TrmH family [Colwellia psychrerythraea 34H]
Length = 180
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ R + F + + A + DK+ + S KWV VE +S L+
Sbjct: 42 NIGAFIRLADAFAIEKVIVCGALTISDKKMKKASRNEAKWV-CVEYS-DSTTASLQTLLD 99
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG ++ +E S+ + +P K VLVLG E++G+ + + I IP G+ SL
Sbjct: 100 EGHAIYSVELCHESVDYTKVTYPAKCVLVLGNERKGVSEAALKLSLQQIHIPMFGMGNSL 159
Query: 1839 NVHVSGAIALWEYTRQQR 1856
NV +GAI L E Q R
Sbjct: 160 NVSTAGAIVLAECANQIR 177
>gi|268318179|ref|YP_003291898.1| tRNA/rRNA methyltransferase SpoU [Rhodothermus marinus DSM 4252]
gi|262335713|gb|ACY49510.1| tRNA/rRNA methyltransferase (SpoU) [Rhodothermus marinus DSM 4252]
Length = 259
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 17/186 (9%)
Query: 1672 AYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFK 1731
A+ Q E+ + +QVL R+ + V V + N++ + R+ E
Sbjct: 46 AWLQPYLTERRRQRIEQVLDGRTYTV----------VPVVEGLANTGNVSAVMRSAEALG 95
Query: 1732 ASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLG--LEQT 1789
G I + K + + A+KW+ + P + + K G+ ++ LE+
Sbjct: 96 YQGFGIIKGQVQKYKTSERTAQGADKWLDVWTWPTAA--EAVPALKAAGYRIVATALEEA 153
Query: 1790 ANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
P+D + F T LV G E EG+ +++ M DA IP +G +S N+ V+ AIAL+
Sbjct: 154 E---PIDTFDFTVPTALVFGNEVEGVSRELLAMADARCVIPIVGFTQSFNISVAAAIALY 210
Query: 1850 EYTRQQ 1855
R +
Sbjct: 211 HAQRDR 216
>gi|188995957|ref|YP_001930208.1| RNA methyltransferase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931024|gb|ACD65654.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 250
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
E+E+ D+ ++ + + +L+ I N+ + RT E+F SG+ I
Sbjct: 85 ENEIIDKTIKEKGI------------MLILDHITDPQNVGSILRTAEIFGVSGVIIPKER 132
Query: 1742 ILHDKQFQLISVTAEKW-VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+ + + T + +PI +V S+++ +E+ K +G V+ +E+ +I + F
Sbjct: 133 SSPINEVVVKASTGAVFHLPIAKV--GSLRNVIEKFKKKGGWVVAIEKGGRNIA--EIDF 188
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
P L++G E +G+ I+ D IP +G + SLNV + +IALWE +++
Sbjct: 189 PYPIALIVGSEGKGVSKSILEEADIIATIPMVGKITSLNVSNATSIALWELFKRR 243
>gi|407452569|ref|YP_006724294.1| rRNA methylase [Riemerella anatipestifer RA-CH-1]
gi|403313553|gb|AFR36394.1| rRNA methylase [Riemerella anatipestifer RA-CH-1]
Length = 231
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N A + R+ E + + + + D ++ A+ WV + ++P N K LE+ K
Sbjct: 54 NAAAIVRSVEACAFHKVVALEKDNIFDPNLS-VTKGADTWVEVEKMPRN--KASLEKIKE 110
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
G+ ++ + N++ L Y LV G E EG+ +++ D + IP G +S
Sbjct: 111 RGYKIVAVSPENNAMMLPDYKVETPIALVFGTEWEGVSDELLDFADETLAIPMYGFTKSF 170
Query: 1839 NVHVSGAIALWEYTRQ 1854
NV V+ AI ++E ++
Sbjct: 171 NVSVAAAICMYELKQK 186
>gi|406873567|gb|EKD23684.1| tRNA/rRNA methyltransferase [uncultured bacterium]
Length = 155
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVL 1808
+++ AE+++P + S+ + R K EG+ + +EQ++ SIP + PK K L++
Sbjct: 54 VALGAEEYIPWEYI--KSVARLITRLKKEGYMICAVEQSSKSIPYRAFKAPKGAKIALIM 111
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLN 1839
G E EG+P I+ D +EIP G SLN
Sbjct: 112 GSEVEGLPKTILARTDVILEIPMFGQKESLN 142
>gi|390437432|ref|ZP_10225970.1| putative methyltransferase [Pantoea agglomerans IG1]
Length = 393
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + VL + NL + R+C F GL + DA++L TAE
Sbjct: 241 QANTKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 297
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + LE + G++++ + PL Q P+K VLVLG+E+EG+
Sbjct: 298 HVQAISGATFSEGLEAFRKAGYTIV-TTSSHQGTPLAQAQLPEKMVLVLGQEREGLSDTA 356
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 357 FKQGDMSLSIGGTGNVESLNVSVATGVLLAEWWRQ 391
>gi|308187856|ref|YP_003931987.1| hypothetical protein Pvag_2365 [Pantoea vagans C9-1]
gi|308058366|gb|ADO10538.1| hypothetical protein Pvag_2365 [Pantoea vagans C9-1]
Length = 394
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + VL + NL + R+C F GL + DA++L TAE
Sbjct: 242 QANTKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 298
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + LE + G++++ + PL Q P+K VLVLG+E+EG+
Sbjct: 299 HVQAISGATFSEGLEAFRKAGYTIV-TTSSHQGTPLAQAQLPEKMVLVLGQEREGLSDTA 357
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 358 FKQGDMSLSIGGTGNVESLNVSVATGVLLAEWWRQ 392
>gi|310777971|ref|YP_003966304.1| TrmH family RNA methyltransferase [Ilyobacter polytropus DSM 2926]
gi|309747294|gb|ADO81956.1| RNA methyltransferase, TrmH family, group 3 [Ilyobacter polytropus
DSM 2926]
Length = 236
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTA 1755
+E + + VLV + N + R+ E+F G+ I + N + ++ S A
Sbjct: 79 LEKVAKDEKSIVLVLDGVQDPRNFGAIVRSAEIFGVKGIIIPERNSVKINETVVKTSTGA 138
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
+ V I++V +I +++ K + V G E + D+ +P +T LV+G E GI
Sbjct: 139 IEHVDIIKV--TNISEAIQKLKKLDYWVYGAEGSGKKCYYDE-KYPNRTALVMGGEGSGI 195
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ D + IP G + SLNV V+G I L E ++
Sbjct: 196 RKKVKENCDILVNIPMYGKINSLNVSVAGGILLSEIAKK 234
>gi|429121086|ref|ZP_19181732.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter sakazakii 680]
gi|426324370|emb|CCK12469.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter sakazakii 680]
Length = 353
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 200 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 256
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 257 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 315
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 316 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 352
>gi|389839953|ref|YP_006342037.1| methyltransferase [Cronobacter sakazakii ES15]
gi|449307202|ref|YP_007439558.1| methyltransferase [Cronobacter sakazakii SP291]
gi|387850429|gb|AFJ98526.1| putative methyltransferase [Cronobacter sakazakii ES15]
gi|449097235|gb|AGE85269.1| methyltransferase [Cronobacter sakazakii SP291]
Length = 353
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 200 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 256
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 257 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 315
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 316 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 352
>gi|156932878|ref|YP_001436794.1| putative methyltransferase [Cronobacter sakazakii ATCC BAA-894]
gi|156531132|gb|ABU75958.1| hypothetical protein ESA_00679 [Cronobacter sakazakii ATCC BAA-894]
Length = 357
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 204 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 260
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 261 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 319
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 320 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 356
>gi|427711708|ref|YP_007060332.1| rRNA methylase [Synechococcus sp. PCC 6312]
gi|427375837|gb|AFY59789.1| rRNA methylase, putative, group 3 [Synechococcus sp. PCC 6312]
Length = 504
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA++ + Q ++ A ++ NL + R+ E F A G+ I
Sbjct: 327 ELADLIAQAQA-------KTHQPVLIAAEGLNDPQNLGAIIRSAEAFGAQGMIIP----- 374
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + + +T + +V ++ HF LE K GF + GL S
Sbjct: 375 ---QRRAVGITP----AVAKVAAGALDHFAVARVVNMNQALETLKEAGFWLYGL-AVNGS 426
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
PL + VLV+G E+ G+ + D + IP LG SLN V+ +AL+E
Sbjct: 427 QPLVETKLTGPVVLVIGAEENGLSLQAQKHCDQLVSIPLLGETESLNASVAAGVALYEVF 486
Query: 1853 RQQ 1855
RQ+
Sbjct: 487 RQR 489
>gi|56480145|ref|NP_708432.2| methyltransferase [Shigella flexneri 2a str. 301]
gi|56383696|gb|AAN44139.2| conserved hypothetical protein [Shigella flexneri 2a str. 301]
Length = 345
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKW 1758
I+A Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 191 IQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHV 250
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
PI ++I + L + G+SV+ + PL + P K VLVLG+E EG+P
Sbjct: 251 QPITG---HNIVNVLHDFRQAGYSVVN-TSSEQGTPLFKTSLPAKMVLVLGQEYEGLPDA 306
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344
>gi|86142668|ref|ZP_01061107.1| putative tRNA/rRNA methyltransferase [Leeuwenhoekiella blandensis
MED217]
gi|85830700|gb|EAQ49158.1| putative tRNA/rRNA methyltransferase [Leeuwenhoekiella blandensis
MED217]
Length = 175
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI-LHDKQFQLISVTAEKWVPIVEVP 1765
FVLV I+ N L R + + + + I + + + ++EK VP P
Sbjct: 22 FVLVCDGINSPANAGSLFRLADALGIAHIYFCNTTIQFESTRLKRTARSSEKLVPYS--P 79
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPL---DQYMFPKKTVLVLGREKEGIPVDIIHM 1822
+ L K + + ++GLE T S PL ++Y F KK LVLG E+ GI D++++
Sbjct: 80 DADVITTLNGLKEKDYHLIGLELTTTSKPLASLNEYAF-KKIALVLGHERYGICEDVLNI 138
Query: 1823 LDACIEIPQLGVVRSLNVHVSGAIALWE 1850
LD IP G S+NV + AIA ++
Sbjct: 139 LDHITYIPMRGKNSSMNVSQAAAIAAYQ 166
>gi|304398699|ref|ZP_07380571.1| tRNA/rRNA methyltransferase (SpoU) [Pantoea sp. aB]
gi|440758212|ref|ZP_20937384.1| putative tRNA, rRNA methyltransferase yfiF [Pantoea agglomerans 299R]
gi|304353910|gb|EFM18285.1| tRNA/rRNA methyltransferase (SpoU) [Pantoea sp. aB]
gi|436428091|gb|ELP25756.1| putative tRNA, rRNA methyltransferase yfiF [Pantoea agglomerans 299R]
Length = 394
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + VL + NL + R+C F GL + DA++L TAE
Sbjct: 242 QATTKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 298
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + LE + G++++ + PL Q P+K VLVLG+E+EG+
Sbjct: 299 HVQAISGATFSEGLEAFRKAGYTIV-TTSSHQGTPLAQAKLPEKMVLVLGQEREGLSDTA 357
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 358 FKQGDMSLSIGGTGNVESLNVSVATGVLLAEWWRQ 392
>gi|312112708|ref|YP_003991024.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. Y4.1MC1]
gi|336237170|ref|YP_004589786.1| tRNA/rRNA methyltransferase SpoU [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721665|ref|ZP_17695847.1| tRNA/rRNA methyltransferase spoU [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217809|gb|ADP76413.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. Y4.1MC1]
gi|335364025|gb|AEH49705.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus thermoglucosidasius
C56-YS93]
gi|383365468|gb|EID42764.1| tRNA/rRNA methyltransferase spoU [Geobacillus thermoglucosidans
TNO-09.020]
Length = 237
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVAS-LIDRIPNLAGLARTCEVFKA 1732
K+ L E+ +++ +L R M I R ++V V + +D N A + RT E F
Sbjct: 15 KEGLLTEETRLIWEMILPERLKRMYDILQQRTRYVTVLTEAVDDPHNQAAVLRTAEAF-- 72
Query: 1733 SGLAIADANILHDKQ-FQ---LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
+ D ++ + FQ L++ A+KW+ + + P I ++ + +G+ V
Sbjct: 73 ---GVQDVYVVAGRAPFQPNPLVTRHADKWLTLRQQP--DIVTAIQDLQAKGYRVYASYL 127
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
+I L + T L+ G E G+ + I + DA IP G V+S N+ V+ A+AL
Sbjct: 128 GEGTIRLCDIDVSQPTALLFGNEHSGVSQEAIRVADATFMIPMYGFVQSFNISVAAALAL 187
Query: 1849 WEYTRQQR 1856
++ T + R
Sbjct: 188 YDVTERAR 195
>gi|149194690|ref|ZP_01871785.1| rRNA methylase SpoU [Caminibacter mediatlanticus TB-2]
gi|149135113|gb|EDM23594.1| rRNA methylase SpoU [Caminibacter mediatlanticus TB-2]
Length = 200
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQL---ISVTAEKWVPIVEVPVNSIKHFLER 1775
NL+ + RTC+ L H K+ +L I++ A KW + V I++F +
Sbjct: 35 NLSAIVRTCDAVNVGKLYYR-----HQKKVKLNNEITMGAHKW--LFTEYVEDIENFYKN 87
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
K +G+ V+ ++I + + K T++VLG E +G I D + IP G+
Sbjct: 88 IKEKGYQVVVTLLDKDTIDFREVDYTKPTLIVLGNEVDGASEVSIKYADKKVIIPMYGMS 147
Query: 1836 RSLNVHVSGAIALWEYTRQQ 1855
+SLNV V+ A+ L+E RQ+
Sbjct: 148 QSLNVSVANAVILYEAQRQR 167
>gi|347535385|ref|YP_004842810.1| putative tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
gi|345528543|emb|CCB68573.1| Probable tRNA/rRNA methyltransferase [Flavobacterium branchiophilum
FL-15]
Length = 176
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQY-MFP-KKTVLVLGREKEGIPVDIIHMLDACIEI 1829
+ + + +G V +EQ N+I L+++ + P +K LV G E G+ + + + IEI
Sbjct: 89 LIPKLQQDGLQVWAIEQVDNAISLEKFEIIPHQKYALVFGNEVFGVNEQAVRLCNGAIEI 148
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
PQLG SLN+ VS I LW+ ++ RF
Sbjct: 149 PQLGTKHSLNIAVSAGIVLWDLFKKIRF 176
>gi|46580760|ref|YP_011568.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387154028|ref|YP_005702964.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46450180|gb|AAS96828.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234472|gb|ADP87326.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 196
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
++ LV + I N++ + R+C+ F + + + + S +A KWV
Sbjct: 21 QKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPSLSGKTSASARKWV---- 76
Query: 1764 VPVNSIKH-----FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
++++H + + G VL + + P+ Y + T +++G E G+ +
Sbjct: 77 ---DTVRHQDRDSLMSTLRASGHQVLATSCSPVAKPVADYDLTRPTAIIMGNEHSGVSQE 133
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++ ++D + IP G+++S NV V+ AI L E +RQ+
Sbjct: 134 LVDVVDGEVYIPMYGMIQSFNVSVAAAILLSEASRQR 170
>gi|94969640|ref|YP_591688.1| tRNA/rRNA methyltransferase SpoU [Candidatus Koribacter versatilis
Ellin345]
gi|94551690|gb|ABF41614.1| tRNA/rRNA methyltransferase (SpoU) [Candidatus Koribacter versatilis
Ellin345]
Length = 285
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 26/167 (15%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV 1759
+RA + VA + D NL + R+ E F A+G+ I D TA W
Sbjct: 131 LRAENPMLLGVAGVQDP-GNLGTILRSAEAFGATGVLIGDK-------------TASPWN 176
Query: 1760 PIV---------EVPVNSIK--HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
P V +PV ++ LE+ + +G +L PL + F T++++
Sbjct: 177 PKVIRGSSGSVFRLPVVKVEWPAALEQLRAKGVQILATSSHKGE-PLPEVDFTGPTIVLI 235
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G E G+P D++ +D + IP V SLN ++ +I ++E RQ+
Sbjct: 236 GGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQR 282
>gi|149372809|ref|ZP_01891830.1| SpoU rRNA methylase family protein [unidentified eubacterium SCB49]
gi|149354506|gb|EDM43071.1| SpoU rRNA methylase family protein [unidentified eubacterium SCB49]
Length = 170
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 1692 ARSLAMETIRASRQQF--VLVASLIDRIPNLAGLARTCEVFKASGLAIADANI-LHDKQF 1748
+ L+ + + S Q F ++ +D N L R CE F + + I + +
Sbjct: 2 SHQLSHQENKFSSQSFPITVICDHLDSPANQGALFRVCEAFGVNNIIFFGNTIDIKSSRL 61
Query: 1749 QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VL 1806
+ + + EK +P V+ IK + K ++GLE T++S + + +T L
Sbjct: 62 KRTARSTEKLIPYS--CVSDIKETIATLKQNNTRLIGLEITSDSAAIQELTIDTQTSIAL 119
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
++G EK GI DI+ LD+ I G S+NV S IAL+E T++
Sbjct: 120 IIGSEKHGISEDILQYLDSVYHITMFGNNSSMNVIQSTGIALYEITKK 167
>gi|417423929|ref|ZP_12160348.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353617885|gb|EHC68732.1| tRNA/rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 342
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 189 QAADQDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 248
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 249 PITG---ESIVDVLDDFRQAGYTVV-TTSSERGQALFSTTLPEKMVLVLGREYDYLPEAA 304
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 305 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 341
>gi|226357312|ref|YP_002787052.1| tRNA guanosine-2-O-methyltransferase [Deinococcus deserti VCD115]
gi|226319302|gb|ACO47298.1| putative tRNA guanosine-2-O-methyltransferase (transfer ribonucleate
guanosine 2-methyltransferase) [Deinococcus deserti
VCD115]
Length = 222
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCE---VFKASGLAIADANI--LHDKQFQLI 1751
+ +R + ++ +++ NL+ + RTC+ V +A + + ++
Sbjct: 11 LRVLRHRQPTLTVLMDEVNKPHNLSAIIRTCDAVGVLEAHAVPPKGGPLASFSGHTYEAT 70
Query: 1752 SVTAEKWVPI-VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
S +A KWVP+ S H L+ +GF VL + S+ + + + T ++LG
Sbjct: 71 SGSAHKWVPVHSHTDAVSAVHALQ---GQGFQVLATHLSQRSVDYREPDYTRPTCVLLGA 127
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EK G+ + D I IP G+V+SLNV V+ A L+E RQ+
Sbjct: 128 EKWGVSDEAADAADHNIVIPMFGMVQSLNVSVAAATILFEAQRQR 172
>gi|331698924|ref|YP_004335163.1| tRNA/rRNA methyltransferase SpoU [Pseudonocardia dioxanivorans
CB1190]
gi|326953613|gb|AEA27310.1| tRNA/rRNA methyltransferase (SpoU) [Pseudonocardia dioxanivorans
CB1190]
Length = 256
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLN 1839
GF+V GL +S L + P++ LVLG E EG+ D+ LD + IP G V SLN
Sbjct: 182 GFAVHGLAAGGDS--LLEAELPERVALVLGNESEGLSADVREELDGTLAIPMFGGVESLN 239
Query: 1840 VHVSGAIALWEYTRQQR 1856
V +GA+A +E R++R
Sbjct: 240 VASAGAVAAYELLRRRR 256
>gi|239828668|ref|YP_002951292.1| tRNA/rRNA methyltransferase SpoU [Geobacillus sp. WCH70]
gi|239808961|gb|ACS26026.1| tRNA/rRNA methyltransferase (SpoU) [Geobacillus sp. WCH70]
Length = 237
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVAS-LIDRIPNLAGLARTCEVFKASGLAIA 1738
E+ +++ +L R M + R +++ V + +D N A + RT E F +
Sbjct: 21 EETRLIWEMILPERLKRMYDVLQKRTRYITVLTEAVDDPHNQAAVLRTAEAF-----GVQ 75
Query: 1739 DANILHDKQ-FQ---LISVTAEKWVPIVEVP--VNSIKHFLERKKHEGFSVLGLEQTANS 1792
D ++ K FQ L++ A+KW+ + + P V +IK + +G+ V +
Sbjct: 76 DVYVVTGKAPFQPNPLVTRHADKWLTLQQKPDIVTTIKEL----QAKGYQVYASYLGEGT 131
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
+ L + T L+ G E G+ + I DA IP G V+S N+ V+ A+AL++ T
Sbjct: 132 LRLGDIDVSRPTALLFGNEHSGVSQEAIRAADATFMIPMYGFVQSFNISVAAALALYDVT 191
Query: 1853 RQQR 1856
+ R
Sbjct: 192 ERAR 195
>gi|399526899|ref|ZP_10766639.1| RNA methyltransferase, TrmH family [Actinomyces sp. ICM39]
gi|398362551|gb|EJN46240.1| RNA methyltransferase, TrmH family [Actinomyces sp. ICM39]
Length = 230
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 1693 RSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQF 1748
R ME IRA F + +D N+ + RT A+ + +++ K++
Sbjct: 65 RYWTMEAIRADIAARSLPFEVAVENLDHDFNIGSIVRT-----ANAMGARRVHVVGRKRW 119
Query: 1749 -QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+ ++ ++++P+ P ++ +E EG +++G++ S+ L+ + P++ LV
Sbjct: 120 NRRGAMVTDRYLPVDHRP--EVRELVEHCSKEGLTLVGVDNVEGSVALEGAVLPERACLV 177
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ ++I + + I Q G RS+NV + AI +W + +
Sbjct: 178 FGSEASGLSEEMIRACEIVVAITQRGSTRSMNVGHAAAIVMWAHASR 224
>gi|427702678|ref|YP_007045900.1| rRNA methylase [Cyanobium gracile PCC 6307]
gi|427345846|gb|AFY28559.1| rRNA methylase [Cyanobium gracile PCC 6307]
Length = 229
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ--FQLISVTAEKWVPIVEV 1764
L+ +D+ NL+ + R+C+ A G+ A A L + F ++ ++KWV +
Sbjct: 22 LTLLLEHVDKPHNLSAILRSCD---AVGVLEAHAVSLPGRTPTFNSTALGSQKWVALHRH 78
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
+S + R + GF + G A ++ F T VLG EK G+ + +D
Sbjct: 79 GRSS--DAIARLRAGGFRLYGTHLGARAVDYRDCDFTGPTAFVLGAEKWGLSEETAAAID 136
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I IP +G+V+SLNV V+ AI L+E RQ++
Sbjct: 137 QAIVIPMVGMVQSLNVSVATAILLFEALRQRQ 168
>gi|387132505|ref|YP_006298477.1| TrmH family RNA methyltransferase [Prevotella intermedia 17]
gi|386375353|gb|AFJ08353.1| RNA methyltransferase, TrmH family [Prevotella intermedia 17]
Length = 177
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 1695 LAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLIS 1752
L++E + SR+ V+V + + N+ + R+C+ F+ + + + + +
Sbjct: 4 LSLEEFKQSRKLPLVVVLDDVRSLYNVGSVFRSCDAFRIEAIYLCGITATPPNAEIHKTA 63
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD---QYMFP-------- 1801
+ AE V ++ + + + K+ G+ V +EQ S L +++ P
Sbjct: 64 LGAENSVDWQYF--SNAEDAVTQLKNNGYFVYSVEQVEGSTALQDLSEHISPINNDATAQ 121
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
K +VLG E +G+ ++ + D C+EIPQ G SLNV V+ I +WE+ R
Sbjct: 122 KHYAVVLGNEVKGVHQSVVDLSDGCLEIPQFGTKHSLNVSVTAGIVVWEFAR 173
>gi|221134069|ref|ZP_03560374.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. HTCC2999]
Length = 235
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQL---ISVTAEKWVPIVEVPVNSIKHFLER 1775
N+A L RTC+ + I +A+++ ++ + L S+ A WV + E + I+ +
Sbjct: 32 NVAALIRTCD-----AVGIHEAHVVWNQNYSLRVGTSLGAHHWVGMHEH--SDIEKAIAH 84
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
K +G VL + +++ + + T ++LG+EK G + I + D I +P +G+
Sbjct: 85 LKGQGMQVLVTNLSDDAVDFREVDYTLPTAIILGQEKFGATKNAIALADKEIVVPMVGMT 144
Query: 1836 RSLNVHVSGAIALWEYTRQQ 1855
SLNV V+ A+ L+E RQ+
Sbjct: 145 VSLNVSVAAAVILYEAQRQR 164
>gi|124023764|ref|YP_001018071.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str. MIT
9303]
gi|123964050|gb|ABM78806.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9303]
Length = 229
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDK--QFQLISVTAEKWVPIVEVPVNSIKH 1771
+++ NL+ + R+C+ A G+ A A + F + ++KW+P+ E +SI+
Sbjct: 29 VEKPHNLSAILRSCD---AVGVLEAHAVNYSGRLPTFNSTAQGSQKWIPLKEH--SSIEV 83
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
++ K GF + G N+ F + T VLG EK G+ ++D I IP
Sbjct: 84 AVKAIKESGFRLYGTHLGGNARDYRDCDFCEPTAFVLGAEKWGLSELATPLMDEGIFIPM 143
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQRF 1857
G+V+SLNV V+ A L+E RQ+R
Sbjct: 144 CGMVQSLNVSVAAATLLFEALRQRRL 169
>gi|428768764|ref|YP_007160554.1| tRNA guanosine-2'-O-methyltransferase [Cyanobacterium aponinum PCC
10605]
gi|428683043|gb|AFZ52510.1| tRNA guanosine-2'-O-methyltransferase [Cyanobacterium aponinum PCC
10605]
Length = 233
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQL-----ISVTAEKWVPI 1761
L+ ++ NL+ + R+CE + + ++++++Q +L ++ AE+W +
Sbjct: 20 LTLITDNVNNFRNLSAIIRSCE-----AVGTMEVHLVNNQQEKLYLINKVTAGAERW--L 72
Query: 1762 VEVPVNSIKHFLERKKHEGFSVL--------GLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
+ +SI + K GF++ G+ ++ + + K T V+G EK+
Sbjct: 73 TQTRHSSIVTGINHLKKRGFTIYATHLGDPEGICCAVRTLDYRKMDYTKPTAFVVGSEKK 132
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
GI + + D I IP +G+ +SLNV V+ AI L+E RQ+
Sbjct: 133 GISEEALENADYHISIPMMGMTQSLNVSVATAIILFEAQRQR 174
>gi|410612461|ref|ZP_11323539.1| RNA methyltransferase [Glaciecola psychrophila 170]
gi|410168003|dbj|GAC37428.1| RNA methyltransferase [Glaciecola psychrophila 170]
Length = 180
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 1675 QLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASG 1734
Q +++ KED + + + L E + V++ + N+ R + F
Sbjct: 3 QKIQLTKED-----LRKNKPLRDEYPSKPKIPLVVLLDNVTNSHNIGAFIRLADAFAIEK 57
Query: 1735 LAIADANILHDKQFQLISVTAEKWVPI--VEVPVNSIKHFLERKKHEGFSVLGLEQTANS 1792
+ + + DK+ S KWV + + +S++ L+ EG++V +E S
Sbjct: 58 VIVCGELTISDKKLNKASRNEAKWVCVEYSDSTTSSLQTLLD----EGYAVYSVELCHES 113
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
+ +P++ VLV G E++G+ + + I IP G+ SLNV +GAI L E
Sbjct: 114 VDYSDVTYPERCVLVFGNERKGVSEPTLKLSHRHIHIPMFGMGNSLNVSTAGAIVLAECA 173
Query: 1853 RQQR 1856
Q R
Sbjct: 174 NQIR 177
>gi|440747227|ref|ZP_20926487.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Mariniradius
saccharolyticus AK6]
gi|436484473|gb|ELP40465.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Mariniradius
saccharolyticus AK6]
Length = 257
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIAD---ANILHDKQFQLISVTAEKWVPIVE 1763
+LV I + N +ART E + I + A I D S A +P+
Sbjct: 110 LILVLDRITDVRNFGAIARTAECAGVHAIVIPEKGSAQINSDAV--KTSAGALNHLPVAR 167
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ + ++ K G +V+ + + + D F TVL+LG E++GI +++ +
Sbjct: 168 V--KNLYYIVKDLKKMGLNVVAVTEKTEKLMYDTD-FTSPTVLILGSEEDGISPELMGLS 224
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D I+IP G + SLNV VS + ++E RQ++
Sbjct: 225 DESIKIPMAGNIESLNVSVSAGVVIYEAIRQRK 257
>gi|307150692|ref|YP_003886076.1| TrmH family RNA methyltransferase [Cyanothece sp. PCC 7822]
gi|306980920|gb|ADN12801.1| RNA methyltransferase, TrmH family, group 3 [Cyanothece sp. PCC 7822]
Length = 313
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QAR+ ++ +L+A I NL + RT E A GL I +
Sbjct: 131 ELGDLIEQARA-------STPAPVILIADGITDPHNLGAIIRTTEAIGAQGLVIPQRRAV 183
Query: 1744 H-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
++ A + +P+ V VN + LE K GF + G + S L F
Sbjct: 184 GITSSVMKVAAGALEHLPVARV-VN-LSRALEELKEAGFWIYG-TMSQGSKALHTIDFSG 240
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
LV+G E EG+ + DA I IP G SLN V+ AIAL+E RQ++
Sbjct: 241 AVGLVVGSEGEGLSLLTQRCCDALISIPLAGKTPSLNASVAAAIALYEVYRQRQ 294
>gi|421885784|ref|ZP_16316969.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379984688|emb|CCF89242.1| putative methyltransferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 345
Score = 59.7 bits (143), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADQDCVLALEDFANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI SI L+ + G++V+ L P+K VLVLGRE + +P
Sbjct: 252 PITG---ESIVDVLDDFRQAGYTVVTTSSDRGQ-ALFSTTLPEKMVLVLGREYDYLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPDDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|295133953|ref|YP_003584629.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
gi|294981968|gb|ADF52433.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
Length = 217
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 1682 EDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
ED L D+ +SL + I + + ++ N + + R+C+VF + + +
Sbjct: 11 EDFLTDR---RKSLIKKVIDQRTNHITVATQDVYQLHNTSAVIRSCDVFGIQNIHVIEEK 67
Query: 1742 ILH--DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM 1799
D++ I++ A+KWV + S K + + G+ ++ +S+ L +
Sbjct: 68 FPKRIDRE---IAMGAQKWVSVNRHA--SAKECISHVREMGYQIVATSPHDDSLHLGDFD 122
Query: 1800 FPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
KK+ L G E+ G+ +II D ++IP G SLN+ VS AI L + R
Sbjct: 123 ITKKSALFFGTERYGLSQEIIDEADCTLKIPMYGFTESLNISVSAAIILQSLAEKMR 179
>gi|120601954|ref|YP_966354.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris DP4]
gi|120562183|gb|ABM27927.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio vulgaris DP4]
Length = 196
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
++ LV + I N++ + R+C+ F + + + + S +A KWV
Sbjct: 21 QKDLTLVLANIHDPHNVSAIYRSCDAFGVAQVHLYYTDTAFPALSGKTSASARKWV---- 76
Query: 1764 VPVNSIKH-----FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
++++H + + G VL + + P+ Y + T +++G E G+ +
Sbjct: 77 ---DTVRHQDRDSLMSTLRASGHQVLATSCSPVAKPVADYDLTRPTAIIMGNEHSGVSQE 133
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++ ++D + IP G+++S NV V+ AI L E +RQ+
Sbjct: 134 LVDVVDGEVYIPMYGMIQSFNVSVAAAILLSEASRQR 170
>gi|429101400|ref|ZP_19163374.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter turicensis 564]
gi|426288049|emb|CCJ89487.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter turicensis 564]
Length = 353
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L + TAE
Sbjct: 200 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLL---ESGAAVRTAEGGAE 256
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 257 HVEPITGDSFSDALVQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 315
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLNV V+ + L E+ RQ +
Sbjct: 316 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQNK 352
>gi|291515114|emb|CBK64324.1| rRNA methylase, putative, group 3 [Alistipes shahii WAL 8301]
Length = 246
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E + V++ + + N +AR+ E A GL N + I +A
Sbjct: 85 LERVPEDETPLVVLFDGVTDVRNFGAIARSAECAGAHGLITPLKNSA-PVNAEAIRSSAG 143
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
I V S+++ L+ + EGF V+ + + + D F + TV+V+G E GI
Sbjct: 144 ALTTIPVCRVGSVRNTLKALQAEGFQVVAATEKSRKLLYDAD-FRRPTVIVMGAEDTGIS 202
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ + D + IP +G + SLNV + A+ L+E RQ+
Sbjct: 203 KEVLKLCDEQLAIPLIGHIESLNVSAAAAVMLFEVVRQR 241
>gi|419958948|ref|ZP_14475006.1| putative methyltransferase [Enterobacter cloacae subsp. cloacae GS1]
gi|388606251|gb|EIM35463.1| putative methyltransferase [Enterobacter cloacae subsp. cloacae GS1]
Length = 361
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ LE+ +
Sbjct: 226 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLEALEQFR 282
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ A + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 283 KAGYTIVTTSSRA-ATPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVES 341
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ R +
Sbjct: 342 LNVSVATGVLLAEWWRHNK 360
>gi|354596363|ref|ZP_09014380.1| tRNA/rRNA methyltransferase (SpoU) [Brenneria sp. EniD312]
gi|353674298|gb|EHD20331.1| tRNA/rRNA methyltransferase (SpoU) [Brenneria sp. EniD312]
Length = 385
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A + VL I NL G+ R+C F +G+ + DA L TAE
Sbjct: 233 AGERDCVLALEEIGNPHNLGGIMRSCAHFGVNGVVVQDAAALESGA---AVRTAEGGAEH 289
Query: 1762 VE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V+ + + L ++ G++++ + PL + FP KTV+VLG+E +G+
Sbjct: 290 VKAINADDFLSVLAEFRNAGYTIV-TTSSHKGTPLSKTAFPAKTVIVLGQEGDGLSDSAW 348
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D I I G V SLN+ V+ I L E+ RQ +
Sbjct: 349 QQGDVKISIDGTGRVESLNISVATGILLSEWWRQNK 384
>gi|119773403|ref|YP_926143.1| tRNA guanosine-2'-O-methyltransferase [Shewanella amazonensis SB2B]
gi|119765903|gb|ABL98473.1| tRNA guanosine-2'-O-methyltransferase [Shewanella amazonensis SB2B]
Length = 241
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K +G V+ + N+ + + K T +VLG EK G+ + + + DA + IP +G+V+
Sbjct: 87 KADGMQVVVTNFSPNAKDFREIDYTKPTAIVLGHEKNGVSDEAVRLADAEVIIPMVGMVQ 146
Query: 1837 SLNVHVSGAIALWEYTRQQR 1856
SLNV V+GA+ L+E RQ+R
Sbjct: 147 SLNVSVAGALVLFEAERQRR 166
>gi|194334189|ref|YP_002016049.1| tRNA/rRNA methyltransferase SpoU [Prosthecochloris aestuarii DSM 271]
gi|194312007|gb|ACF46402.1| tRNA/rRNA methyltransferase (SpoU) [Prosthecochloris aestuarii DSM
271]
Length = 181
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 1777 KHEGFSVLGLEQTANS---IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G ++ GLE T NS +D+ FP L+LG E +GI DI+ D +EIPQ G
Sbjct: 97 KEKGIAICGLEITTNSRAYTDVDRSDFP--LCLILGNEVQGIDDDILEQCDHILEIPQFG 154
Query: 1834 VVRSLNVHVSGAIALWEYTRQQR 1856
SLNV V+ +AL+E R R
Sbjct: 155 TKHSLNVSVAAGVALFEMVRTFR 177
>gi|334365892|ref|ZP_08514841.1| RNA methyltransferase, TrmH family [Alistipes sp. HGB5]
gi|313157998|gb|EFR57404.1| RNA methyltransferase, TrmH family [Alistipes sp. HGB5]
Length = 178
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 5/166 (3%)
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQL 1750
R A E ++ +V + + N+ RT + F +A+ + ++
Sbjct: 10 GRPTAGEFAAMAKMPVTVVLDNVRSLQNVGAFFRTGDAFAVEHIALCGITAVPPNRDIHK 69
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVL 1808
++ AE VP + + ++R +G+ VL +EQ ++ LD + K LV
Sbjct: 70 TALGAELTVPWSYY--ETTEACIDRLHADGYEVLAVEQVEGAVMLDVFRAAPGVKYALVF 127
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ + D IEIPQ G S+NV VSG + LW + R+
Sbjct: 128 GNEVMGVGQSAVDRCDGAIEIPQAGTKHSINVAVSGGVVLWSFFRR 173
>gi|256830639|ref|YP_003159367.1| tRNA guanosine-2'-O-methyltransferase [Desulfomicrobium baculatum DSM
4028]
gi|256579815|gb|ACU90951.1| tRNA guanosine-2'-O-methyltransferase [Desulfomicrobium baculatum DSM
4028]
Length = 201
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 1691 QARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
+ R + ++ A RQ LV + I N++ + R+C+ F G+ +
Sbjct: 8 EDRKTRLRSVLARRQPDLTLVLNNIHDPHNVSAILRSCDAFGVFGVHLYYTKEKFPSLAN 67
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
S +A+KW+ + ++ + G ++G + + P+ F + T ++LG
Sbjct: 68 SSSGSAKKWIDLTRH--REAGPMIQGLRGRGMQIVGTGFSPTARPIMDIDFTRPTAIILG 125
Query: 1810 REKEGIPVDI-IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E G+ D+ IH+ D I IP G+V+SLNV V+ A L+E RQ+
Sbjct: 126 NEHRGMDPDVKIHVPDE-IYIPMFGMVQSLNVSVAAATILYEAMRQR 171
>gi|72383592|ref|YP_292947.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str.
NATL2A]
gi|72003442|gb|AAZ59244.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. NATL2A]
Length = 229
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE---KWVPIVEVPVNSIK 1770
+++ NL+ + R+C+ A G+ A A I + ++F + TA+ KWV I + +
Sbjct: 29 VEKPHNLSAIIRSCD---AVGVLEAYA-IFNKEKFLTFNSTAQGSQKWVKINQYKKTT-- 82
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
++ K +GF + G SI + F T VLG EK GI + ++D I IP
Sbjct: 83 EAIKVLKEKGFKLYGTNLNPRSIDYRKCDFKGPTAFVLGAEKWGISEEASSLMDEHIHIP 142
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V SLNV V+ + L+E RQ++
Sbjct: 143 MRGMVESLNVSVAASALLFEALRQRQ 168
>gi|337283289|ref|YP_004622760.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
parasanguinis ATCC 15912]
gi|335370882|gb|AEH56832.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
parasanguinis ATCC 15912]
Length = 242
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAE 1756
+T++ +++ L D NL + RT + SG+ I + S A
Sbjct: 88 QTVQEENPLLLILDGLTDP-HNLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAV 146
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
+ +PI V ++ L++ K EGF + G + N P Q+ K L++G E +GI
Sbjct: 147 EHIPIARV--TNLSQTLDKLKEEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGIS 202
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+I +D I IP G V+SLN V+ AI ++E R +
Sbjct: 203 ANIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNR 241
>gi|414156838|ref|ZP_11413139.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus sp. F0442]
gi|410869831|gb|EKS17791.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus sp. F0442]
Length = 256
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ L++ K
Sbjct: 122 NLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 179
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 180 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGISTNIKKQVDEMITIPMNGHVQS 237
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 238 LNASVAAAILMYEVFRNR 255
>gi|357043308|ref|ZP_09105003.1| hypothetical protein HMPREF9138_01475 [Prevotella histicola F0411]
gi|355368482|gb|EHG15899.1| hypothetical protein HMPREF9138_01475 [Prevotella histicola F0411]
Length = 183
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--------KTVLVLGREKEGIPVDIIHMLD 1824
+E +G V +EQ +S L + +V+G E +G+ ++ M D
Sbjct: 90 IEELHQQGVCVYSVEQVEHSTKLQDMSLDTLCSNTGNTRYAIVMGNEVKGVKQSVVDMSD 149
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
C+EIPQ G SLNV V+ I +WE+ RQ
Sbjct: 150 GCLEIPQFGTKHSLNVSVTAGIVIWEFARQ 179
>gi|312867923|ref|ZP_07728127.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis F0405]
gi|311096327|gb|EFQ54567.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis F0405]
Length = 242
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ L++ K
Sbjct: 108 NLGSIIRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 166 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|340622431|ref|YP_004740883.1| putative tRNA/rRNA methyltransferase [Capnocytophaga canimorsus Cc5]
gi|339902697|gb|AEK23776.1| Putative tRNA/rRNA methyltransferase [Capnocytophaga canimorsus Cc5]
Length = 241
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 1689 VLQARSLAMETIRASR-QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
+ +AR + E I R F + + ++ N + + R+CEVF + + + K+
Sbjct: 36 ITEARKVRFEEILNQRTNHFTVAVEDVFQMHNTSAVVRSCEVFGVQQAHLIERR--YGKR 93
Query: 1748 F-QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
+ I++ A+KWV + + ++ + +G+ ++ ++ LD + K+
Sbjct: 94 LDEKIAMGAQKWVDTFRYE--NTQSCIDTLRAKGYQIVATTPHQDAYLLDDFDIVPKSAF 151
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G E+EG+ ++ D ++IP +G SLN+ VS AI L + T++ R
Sbjct: 152 FFGTEREGLSDTVLQQADTFLKIPMVGFTESLNISVSAAIILQQLTQRLR 201
>gi|330447150|ref|ZP_08310800.1| spoU rRNA Methylase family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491341|dbj|GAA05297.1| spoU rRNA Methylase family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 241
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S A WV + +S+ ++ K +G VL + +I + + K T ++LG E
Sbjct: 64 SAGARNWVELDTH--DSMVEAVQALKDQGMQVLATNLSDTAIDFREVDYTKPTAIILGGE 121
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + M D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 122 KNGITAEALSMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|404403795|ref|ZP_10995379.1| rRNA methylase [Alistipes sp. JC136]
Length = 178
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 5/168 (2%)
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQL 1750
R A E + +V + N+ RT + F A +A+ + +
Sbjct: 10 GRPSAAEFAAMEKMPVTVVLDNVRSAQNVGAFFRTSDAFAAERIALCGITAVPPSRDIHK 69
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVL 1808
++ AE VP + + + + EG+ + +EQ ++ LD + K LV
Sbjct: 70 TALGAELTVPWSRHA--TTPECIAQLRAEGYEIYAVEQVEGAVMLDAFRVRPGVKYALVF 127
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
G E +G+ + + M D IEIPQ G S+NV V+G + LW + + R
Sbjct: 128 GNEVDGVGQEAVDMCDGAIEIPQSGTKHSINVSVAGGVVLWSFFARLR 175
>gi|387878963|ref|YP_006309266.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
parasanguinis FW213]
gi|386792420|gb|AFJ25455.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
parasanguinis FW213]
Length = 248
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ L++ K
Sbjct: 114 NLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 171
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 172 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMNGHVQS 229
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 230 LNASVAAAILMYEVFRNR 247
>gi|322390887|ref|ZP_08064395.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
parasanguinis ATCC 903]
gi|321142400|gb|EFX37870.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
parasanguinis ATCC 903]
Length = 242
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ L++ K
Sbjct: 108 NLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 166 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|297182173|gb|ADI18344.1| rRNA methylases [uncultured actinobacterium HF4000_04C13]
Length = 172
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI--LHDKQFQL 1750
+ L E R S + L+ + N+ + RT ++ + L +A + H K +
Sbjct: 10 KRLHREWRRRSEPEVALLLDSVQTPYNVGAILRTAAAYRVAHLWLAGSTAPPTHAKTAKT 69
Query: 1751 ISVTAE--KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
T W EV +E + G+ ++G+E ++P+++ P+K L
Sbjct: 70 ALGTGRYLTWTICEEV-----SEAIEGIRAAGYGLVGVELADQAVPINEAALPEKACLAF 124
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ + D IPQLG V SLNV + IAL+E R+
Sbjct: 125 GHEDRGLSATTLAACDVVAFIPQLGKVGSLNVSTAAGIALYELNRR 170
>gi|427725192|ref|YP_007072469.1| TrmH family RNA methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427356912|gb|AFY39635.1| RNA methyltransferase, TrmH family, group 3 [Leptolyngbya sp. PCC
7376]
Length = 496
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA++ A+ +++A I NL + RT E A+G+ I
Sbjct: 321 ELPDLIEQAKA-------ATESPVIVIADGITDPHNLGAIIRTAEAIGANGIVIP----- 368
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + + +T+ +V+V +I+HF +E K GF + G + S
Sbjct: 369 ---QRRAVGITST----VVKVAAGAIEHFPVARVINLSRAMEELKEAGFWIYG-TASGGS 420
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
L F LV+G E +G+ + D + IP +G SLN V+ AIAL+E
Sbjct: 421 KTLHNIKFTGAVGLVIGSEGQGLGLLTQKCCDELVSIPMVGKTPSLNASVAAAIALYEIH 480
Query: 1853 RQQ 1855
RQ+
Sbjct: 481 RQK 483
>gi|375144520|ref|YP_005006961.1| tRNA guanosine-2'-O-methyltransferase [Niastella koreensis GR20-10]
gi|361058566|gb|AEV97557.1| tRNA guanosine-2'-O-methyltransferase [Niastella koreensis GR20-10]
Length = 212
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANI-LHDKQFQLISVTA 1755
M ++ + +V + N++ + RTC+ + + + I H K S +A
Sbjct: 10 MAVLKKRQSDLTVVLENVSDPHNISAVMRTCDAVGIQEVYVLNNKIPRHKKWGARSSSSA 69
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
KW+ I + R+K++ +L +++++ L F + LV G E G+
Sbjct: 70 AKWLSIYQFTDAEACFAALRQKYD--RILTTHLSSDAVNLYDIDFTGRIALVFGNEHSGV 127
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+I M D IPQ+G+++SLN+ V+ A+ L+E RQ+
Sbjct: 128 SDEIRAMADGNFIIPQVGIIKSLNISVACAVTLYEAQRQK 167
>gi|239916760|ref|YP_002956318.1| rRNA methylase [Micrococcus luteus NCTC 2665]
gi|281414782|ref|ZP_06246524.1| rRNA methylase [Micrococcus luteus NCTC 2665]
gi|239837967|gb|ACS29764.1| rRNA methylase [Micrococcus luteus NCTC 2665]
Length = 234
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ + RT F A+G+ I I + + ++ ++++ + +++ F
Sbjct: 90 NIGTVVRTANAFNAAGVHI----IGRRRWNRRGAMVTDRYLHVRHH--ETVEAFTAWAAG 143
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
EG VLG++ S+P++ + FP+ VLV G+E G+ ++ A + I Q G RS+
Sbjct: 144 EGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQYGSTRSI 203
Query: 1839 NVHVSGAIALWEYTRQQ 1855
N V+ IA+ + RQ
Sbjct: 204 NAGVAAGIAMHAWIRQH 220
>gi|291294599|ref|YP_003505997.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus ruber DSM 1279]
gi|290469558|gb|ADD26977.1| tRNA guanosine-2'-O-methyltransferase [Meiothermus ruber DSM 1279]
Length = 210
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 1743 LHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
L K F S +A KWV + ++ ++ F K GF VL + ++ Q + +
Sbjct: 68 LKGKTFNETSGSAAKWVGL-QLHADTASAFAHLKA-RGFQVLAAHFSERAVDYRQADYTR 125
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
T ++LG EK G+ + + DA I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 126 PTCILLGTEKWGVSPEAAELADAHILIPMVGMVQSLNVSVAAAVILFEAQRQR 178
>gi|392399101|ref|YP_006435702.1| rRNA methylase [Flexibacter litoralis DSM 6794]
gi|390530179|gb|AFM05909.1| rRNA methylase [Flexibacter litoralis DSM 6794]
Length = 178
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE 1763
+Q V++ + N+ RT + F +A+ I + I TA VE
Sbjct: 22 KQPIVIILDNVRSAHNVGAAFRTADAFSIEKIALC--GITAKPPHREIQKTALGATESVE 79
Query: 1764 VP-VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV---LVLGREKEGIPVDI 1819
++ ++ + +G+S+ +EQT S L+ ++ PKK V G E G+ ++
Sbjct: 80 WEYFDTTNEAIDTLRKQGYSIFAIEQTTESQKLNTFL-PKKETKYGFVFGNEAFGVDAEV 138
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ D+ +EIPQ G SLNV VS I LW T +
Sbjct: 139 LQNCDSALEIPQFGTKHSLNVSVSLGIILWHCTEK 173
>gi|300725268|ref|YP_003714597.1| tRNA /rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297631814|emb|CBJ92535.1| putative tRNA/rRNA methyltransferase [Xenorhabdus nematophila ATCC
19061]
Length = 235
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++I+ +E+ K +G VL + ++ Q + K T +++G+EK+GI + + D
Sbjct: 77 STIQQAIEQFKSDGMQVLATHLSDKAVDFRQIDYTKPTCIIMGQEKKGISKQAVALADHD 136
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I IP G+V+SLNV V+ A+ L+E RQ++
Sbjct: 137 IIIPMAGMVQSLNVSVASALILYEAQRQRQL 167
>gi|406933549|gb|EKD68168.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 156
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 1703 SRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK-QFQLISVTAEKWVPI 1761
+ ++ VLV I N+ + RT + F S L + K Q +S+ AE W+P
Sbjct: 2 NTREIVLVLPNIRSCHNVGAMFRTADAFNISKLYLVGYTATPPKIQIDKVSLGAETWMPW 61
Query: 1762 VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP----KKTVLVLGREKEGIPV 1817
+ ++ + K +G++++GLE+ S + F L++G E +GI
Sbjct: 62 EKR--EELQGLVAELKEQGYAIVGLEKNEESKEIGNLKFEIDDGHAIALIVGNEVDGIDD 119
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
I+ M D + IP LG SLNV ++ +A++
Sbjct: 120 TILDMCDHVVHIPMLGKKESLNVSIAAGVAMY 151
>gi|393779246|ref|ZP_10367491.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392610520|gb|EIW93297.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 180
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKAPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPV 1817
E N++ +E+ K +G ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AW-EYEENTLSA-VEKLKEQGAYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEVKGVEQ 136
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+++ D IEIPQ G SLN+ VS IA+WE
Sbjct: 137 EVVSASDEVIEIPQYGTKHSLNISVSAGIAIWE 169
>gi|417918545|ref|ZP_12562095.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis SK236]
gi|342828215|gb|EGU62589.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis SK236]
Length = 242
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ L++ K
Sbjct: 108 NLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 166 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGSEGKGISANIKKQVDEMITIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|343084859|ref|YP_004774154.1| tRNA/rRNA methyltransferase SpoU [Cyclobacterium marinum DSM 745]
gi|342353393|gb|AEL25923.1| tRNA/rRNA methyltransferase (SpoU) [Cyclobacterium marinum DSM 745]
Length = 173
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPKKT---VLVLGREKEGIPVDIIHMLDACIEI 1829
++R K EG+ + LEQ ++S PL+++ PK + G E G+ D++ D +EI
Sbjct: 85 IKRLKKEGYEICALEQASHSTPLNKFA-PKSGKPYAFIFGNEVFGVEEDVVLAADQVLEI 143
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQR 1856
PQ G SLN+ VS I LW+ + +
Sbjct: 144 PQFGTKHSLNISVSIGITLWDMVSKTK 170
>gi|256421016|ref|YP_003121669.1| tRNA/rRNA methyltransferase SpoU [Chitinophaga pinensis DSM 2588]
gi|256035924|gb|ACU59468.1| tRNA/rRNA methyltransferase (SpoU) [Chitinophaga pinensis DSM 2588]
Length = 197
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
N++ + RTC+ + + + K++ S +A KW+ + + + + R+K
Sbjct: 32 NISAVLRTCDAVGIQDVYVLNTTTARRKRWGHKSSSSAAKWLTVHQFSDTATCMAVVREK 91
Query: 1778 HEGFSVLGLEQTANSI-PLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
++ L A S+ LD F LV G E+EG+ +I + D IPQ+G+++
Sbjct: 92 YDKIYTTHLAADAKSLYELD---FTGSVALVFGNEQEGVSEEIRKLCDGNFIIPQVGIIK 148
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
SLN+ V+ A++++E RQ+
Sbjct: 149 SLNISVACAVSIYEAMRQK 167
>gi|344203224|ref|YP_004788367.1| tRNA/rRNA methyltransferase SpoU [Muricauda ruestringensis DSM 13258]
gi|343955146|gb|AEM70945.1| tRNA/rRNA methyltransferase (SpoU) [Muricauda ruestringensis DSM
13258]
Length = 177
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 1771 HFLERKKHEGFSVLGLEQTANSIPLDQYMF-PKKTV-LVLGREKEGIPVDIIHMLDACIE 1828
+E K G ++ +EQ N++ L+ Y P +T+ L+ G E +G+ +++ DA +E
Sbjct: 89 ELVEALKENGVKIVSVEQAENAVMLNDYQVKPDETIALIFGNEVKGVSQEVVTASDAVLE 148
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
IPQ G SLN+ VS + +W+ +Q
Sbjct: 149 IPQFGTKHSLNISVSTGVVVWDIWSKQ 175
>gi|157373101|ref|YP_001481090.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
gi|157324865|gb|ABV43962.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
Length = 231
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 1755 AEKWVPIVEVP--VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
+ WV + P V+++ H K +G +L +A ++ + + + T ++LG+EK
Sbjct: 67 SNSWVNVKTHPTIVDAVTHL----KDQGMQILATNLSARAVDFREVDYTRPTCVLLGQEK 122
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
GI + + + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 123 TGITEEALRLADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 166
>gi|415784637|ref|ZP_11492458.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPECa14]
gi|323156241|gb|EFZ42400.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPECa14]
Length = 247
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 112 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 168
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 169 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 227
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 228 LNISVATGVLLGEWWRQNK 246
>gi|386392791|ref|ZP_10077572.1| rRNA methylase [Desulfovibrio sp. U5L]
gi|385733669|gb|EIG53867.1| rRNA methylase [Desulfovibrio sp. U5L]
Length = 196
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 1703 SRQQ--FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLI----SVTA 1755
SR+Q LV + I N++ + R+C+ F I ++L+ D F + S +A
Sbjct: 18 SRRQTDLTLVINNIHDPHNVSAILRSCDAF-----GIHRVHLLYTDTAFPALGKKSSGSA 72
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
+KWV + P K +G++++ + PL + K ++LG E G+
Sbjct: 73 KKWVETIRHP--DAAGLAATLKGQGYALVATLCNETARPLQDWDLTGKVAIILGNEHRGV 130
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D+ +D + IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 131 DEDLAPHVDGGLYIPMQGMVQSLNVSVAAAVILYEGFRQR 170
>gi|307128795|ref|YP_003880811.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
gi|306526324|gb|ADM96254.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
Length = 230
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K +G +L +A+++ + + + T ++LG+EK GI D + + D I IP +G+V+
Sbjct: 87 KTQGMQILATNLSASAVDFREVDYTRPTCILLGQEKTGITADALALADQDIIIPMVGMVQ 146
Query: 1837 SLNVHVSGAIALWEYTRQQRF 1857
SLNV V+ A+ L+E RQ++
Sbjct: 147 SLNVSVASALILYEAQRQRQL 167
>gi|429105760|ref|ZP_19167629.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter malonaticus 681]
gi|426292483|emb|CCJ93742.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Cronobacter malonaticus 681]
Length = 371
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F G+ + DA++L TAE
Sbjct: 200 KAGDEDCVLALEDVGNPHNLGAIVRSCAHFGVKGVVVQDASLLESGA---AVRTAEGGAE 256
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
VE + +S L + + G++++ + PL + PKK VLVLG+E EGI
Sbjct: 257 HVEPITGDSFSDALAQFRAAGYAIV-TTSSHKGTPLFKATLPKKMVLVLGQESEGISEAT 315
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 316 QANADLSLSIDGTGNVESLNVSVATGVLLAEWWRQ 350
>gi|33862541|ref|NP_894101.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str. MIT
9313]
gi|33640654|emb|CAE20443.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT
9313]
Length = 245
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDK--QFQLISVTAEKWVPIVEVPVNSIKH 1771
+++ NL+ + R+C+ A G+ A A + F + ++KW+P+ E +SI+
Sbjct: 45 VEKPHNLSAILRSCD---AVGVLEAHAVNYSGRLPTFNSTAQGSQKWIPLKEH--SSIEV 99
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
++ K GF + G N+ F + T VLG EK G+ ++D I IP
Sbjct: 100 AVKAIKDSGFRLYGTHLGGNARDYRDCDFCEPTAFVLGAEKWGLSKLATPLMDEGIFIPM 159
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQRF 1857
G+V+SLNV V+ A L+E RQ+R
Sbjct: 160 SGMVQSLNVSVAAATLLFEALRQRRL 185
>gi|340616055|ref|YP_004734508.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
gi|339730852|emb|CAZ94116.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
Length = 218
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 1716 RIPNLAGLARTCEVFKASGLAIADANILHDKQFQL----ISVTAEKWVPIVEVPVNSIKH 1771
++ N + + R+CEVF I +A+++ + + I++ A++WV + S
Sbjct: 42 QLHNTSAVIRSCEVF-----GIQEAHVIESRYGKRLDDKIAMGAQQWVDVHRYK--STNE 94
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
++R K +G+ V+ +S L+ + KT + G E+ G+ + + D ++IP
Sbjct: 95 CIQRLKSDGYKVIATTPHNDSRFLEDFEIEGKTAFLFGTERTGLSQEAMEQSDGFLKIPM 154
Query: 1832 LGVVRSLNVHVSGAIAL 1848
LG SLN+ VS AI L
Sbjct: 155 LGFTESLNISVSAAIIL 171
>gi|149276476|ref|ZP_01882620.1| putative SpoU rRNA methylase family protein [Pedobacter sp. BAL39]
gi|149232996|gb|EDM38371.1| putative SpoU rRNA methylase family protein [Pedobacter sp. BAL39]
Length = 219
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ EG+ ++ +EQ + S L+ + +K L+ G E G+ +++ ++D CIEIPQ G
Sbjct: 137 REEGYLIIAVEQASGSTMLNTFKPQQDQKYALIFGNEVNGVSDEVMEVIDECIEIPQFGT 196
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
S N+ +S I LW++ + R
Sbjct: 197 KHSFNIVISAGIVLWDFFAKLRL 219
>gi|342218363|ref|ZP_08710977.1| RNA methyltransferase, TrmH family, group 3 [Megasphaera sp. UPII
135-E]
gi|341589775|gb|EGS33037.1| RNA methyltransferase, TrmH family, group 3 [Megasphaera sp. UPII
135-E]
Length = 246
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIA---DANILHDKQFQLISVTAEKWVPIVE 1763
F+++ I+ + N+ + RT E A + I A I ++ S A +++P+V
Sbjct: 99 FLILLDGIEDVHNMGAIIRTAECAGAHSVLIPKHRSAPI--NETVGKTSAGAIEYMPLVS 156
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ ++ ++R + +GF V+G + + SI DQ VLV+G E +GI +
Sbjct: 157 I--GNVTQTVQRLQKKGFWVIGADMSG-SIEYDQADMTVPLVLVIGSEGKGISPLVKKHC 213
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + IP G V SLN V+ AI ++E RQ++
Sbjct: 214 DLLVRIPMFGQVNSLNASVASAILIYEAVRQRK 246
>gi|256826826|ref|YP_003150785.1| rRNA methylase, , group 3 [Cryptobacterium curtum DSM 15641]
gi|256582969|gb|ACU94103.1| rRNA methylase, putative, group 3 [Cryptobacterium curtum DSM 15641]
Length = 300
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 1691 QARSLAM-ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
QA SLA+ + A+ ++V I NL +AR+ E A+G+ I+ +K+
Sbjct: 92 QAVSLAVSHSSSAAPCALIIVLDHITDAGNLGAIARSAESVGAAGI------IIPNKRSA 145
Query: 1750 LISVTAEK-------WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
++ + K +P+ +V +++ L R K+EG+ V G + A D +
Sbjct: 146 YVTASTYKSSAGAISHIPVAQVA--NLQQALARLKNEGYWVAGASEKAEGGIWDANL-TG 202
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
LV+G E G+ D + +PQ GVV SLNV S + ++E+ RQ R
Sbjct: 203 NVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQNRL 257
>gi|330007674|ref|ZP_08306014.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
gi|328535397|gb|EGF61878.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
Length = 131
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 1725 RTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSV 1783
R+C F G+ + DA +L + AE PI +S L+R + G+++
Sbjct: 2 RSCAHFGVKGVVVQDAGVLESGAAIRTAEGGAEHVEPITG---DSFIDTLDRFRKAGYAI 58
Query: 1784 LGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVS 1843
+ + N PL + PKK VL LG+E++G+ I D + I G V SLNV V+
Sbjct: 59 VS-TSSHNGTPLFKAELPKKMVLALGQERDGLSDAAISSADLSVAIDGTGNVESLNVSVA 117
Query: 1844 GAIALWEYTRQQR 1856
+ L E+ RQ +
Sbjct: 118 TGVLLAEWWRQNK 130
>gi|119511316|ref|ZP_01630430.1| RNA methyltransferase TrmH, group 3 [Nodularia spumigena CCY9414]
gi|119464022|gb|EAW44945.1| RNA methyltransferase TrmH, group 3 [Nodularia spumigena CCY9414]
Length = 323
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA+S+ ++VA I NL + RT E A GL I
Sbjct: 148 ELSDLIAQAKSVT--------DPVIVVAEGITDPHNLGAIIRTAEAIGAQGLVIP----- 194
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + +T+ +++V ++++F LE K GF + G T S
Sbjct: 195 ---QRRASGITST----VMKVAAGALENFSVARVVNLSRALEELKEAGFWIYGT-ATTGS 246
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
PL F VLV+G E EG+ + D + IP LG SLN V+ +AL+E
Sbjct: 247 EPLHTVKFSGPIVLVIGSEGEGLSMLTQRSCDVLVSIPLLGKTPSLNASVAAGMALYEIY 306
Query: 1853 RQQ 1855
RQ+
Sbjct: 307 RQR 309
>gi|386322240|ref|YP_006018402.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|416111225|ref|ZP_11592482.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Riemerella anatipestifer
RA-YM]
gi|442315047|ref|YP_007356350.1| rRNA methylase [Riemerella anatipestifer RA-CH-2]
gi|315022826|gb|EFT35850.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Riemerella anatipestifer
RA-YM]
gi|325336783|gb|ADZ13057.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|441483970|gb|AGC40656.1| rRNA methylase [Riemerella anatipestifer RA-CH-2]
Length = 231
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N A + R+ E + + + + D ++ A+ WV + ++P N K LE+ K
Sbjct: 54 NAAAIVRSVEACAFHKVVALEKDNVFDPNLS-VTKGADTWVEVEKMPRN--KASLEKIKE 110
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
G+ ++ + N+ L Y LV G E EG+ +++ D + IP G +S
Sbjct: 111 RGYKIVAVSPENNATMLPDYKVETPIALVFGTEWEGVSDELLDFADETLAIPMYGFTKSF 170
Query: 1839 NVHVSGAIALWEYTRQ 1854
NV V+ AI ++E ++
Sbjct: 171 NVSVAAAICMYELKQK 186
>gi|225848046|ref|YP_002728209.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643892|gb|ACN98942.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 247
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 1637 SQLPKDSL-LDFQKKITL---PKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQA 1692
S PKD L L ++K+ + P+ + ++ + + A ++ ED++ D+V++
Sbjct: 36 SHPPKDLLKLAEERKVKVQKVPRQKVEELAGTKKTQGVVALLSPIQYWNEDKIIDKVIKE 95
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
+ + +LV I N+ + RT E+ SG+ + + + +
Sbjct: 96 KGI------------LLVLDHITDPQNVGSIMRTAEILGVSGIILPKERSSPINEVVVKA 143
Query: 1753 VT-AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
T A ++PI +V S+++ LE+ K +G V+ +E+ +I + FP LV+G E
Sbjct: 144 STGAVFYLPIAKV--GSLRNTLEKFKKKGGWVVAVEKGGKNI--HEIDFPFPLALVVGSE 199
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+G+ ++ D IP G + S NV + AIALWE +++
Sbjct: 200 GKGVSKSVLEEADIVASIPMKGKITSFNVSNATAIALWEVFKKK 243
>gi|319957276|ref|YP_004168539.1| tRNA/rRNA methyltransferase (spou) [Nitratifractor salsuginis DSM
16511]
gi|319419680|gb|ADV46790.1| tRNA/rRNA methyltransferase (SpoU) [Nitratifractor salsuginis DSM
16511]
Length = 260
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVN 1767
V++ + ++ + N+ +AR+ G + + H + I V+ +
Sbjct: 113 VVMLTRLNNLENVGAIARSAAALGVGGYVVPSSGP-HPYGRRAIRVSTGHVTRLKVHCYE 171
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQY-MFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
I +ER + G+++L E T ++PL ++ PK+ L+LG E+EG+P +++ DA
Sbjct: 172 DILQTMERLRELGYTLLAAEATPEAVPLARFGPVPKRWALILGNEEEGVPEEVLEKCDAV 231
Query: 1827 IEIPQLGVVRSLNVHVSGAIALW 1849
++I ++S NV +GAI ++
Sbjct: 232 LQIEMEPGIKSFNVATAGAIIMY 254
>gi|443310509|ref|ZP_21040158.1| rRNA methylase, putative, group 3, partial [Synechocystis sp. PCC
7509]
gi|442779415|gb|ELR89659.1| rRNA methylase, putative, group 3, partial [Synechocystis sp. PCC
7509]
Length = 318
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISV 1753
SL + +S Q ++VA I+ NL + RT E A GL I + ++ V
Sbjct: 145 SLIEKAKSSSEQPVIIVADSINDPHNLGAIIRTAEAIGAQGLVIPQRRAVGITS-TVMKV 203
Query: 1754 TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKE 1813
A V ++ LE K GF + G T S P+ F VLV+G E E
Sbjct: 204 AAGALETFAVARVVNLSRALEELKTAGFWIYGTAATG-SQPVHTVQFSGAIVLVVGSEGE 262
Query: 1814 GIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ + D + IP G SLN V+ +AL+E RQ+
Sbjct: 263 GLSLLTQRCCDVLVSIPLTGNTPSLNASVATGMALYEIYRQR 304
>gi|417863075|ref|ZP_12508123.1| yfiF [Escherichia coli O104:H4 str. C227-11]
gi|419413739|ref|ZP_13954391.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15E]
gi|444953961|ref|ZP_21272061.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0848]
gi|444964574|ref|ZP_21282187.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1775]
gi|341916364|gb|EGT65981.1| yfiF [Escherichia coli O104:H4 str. C227-11]
gi|378259171|gb|EHY18987.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15E]
gi|444563152|gb|ELV40187.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0848]
gi|444576427|gb|ELV52603.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1775]
Length = 246
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 111 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 167
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 168 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 226
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 227 LNISVATGVLLGEWWRQNK 245
>gi|409390427|ref|ZP_11242168.1| putative RNA methyltransferase [Gordonia rubripertincta NBRC 101908]
gi|403199695|dbj|GAB85402.1| putative RNA methyltransferase [Gordonia rubripertincta NBRC 101908]
Length = 228
Score = 59.3 bits (142), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+++ L+ + EG SV+ ++ T S PL+ P++ VL+ G+E G+ D D
Sbjct: 133 DTVGDLLDWARGEGLSVVAVDNTPGSRPLETVELPRECVLLFGQEGPGVSDDAQRQADMT 192
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I Q G RS+N V+ IA+ + RQ
Sbjct: 193 VSIAQFGSTRSINAGVAAGIAMHAWVRQH 221
>gi|429739630|ref|ZP_19273379.1| RNA methyltransferase, TrmH family [Prevotella saccharolytica F0055]
gi|429156287|gb|EKX98921.1| RNA methyltransferase, TrmH family [Prevotella saccharolytica F0055]
Length = 176
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G ++ +EQ ++ L + + +VLG E +G+ +++ + D CIEIPQ G S
Sbjct: 97 GVTIYSVEQAEGAVALQDIKVKQGERYAVVLGNEVKGVQQNVVDLCDGCIEIPQFGTKHS 156
Query: 1838 LNVHVSGAIALWEYTRQQRF 1857
LNV V+ I +WE R+ F
Sbjct: 157 LNVSVAAGIVVWELARKLMF 176
>gi|390947862|ref|YP_006411622.1| rRNA methylase [Alistipes finegoldii DSM 17242]
gi|390424431|gb|AFL78937.1| rRNA methylase [Alistipes finegoldii DSM 17242]
Length = 178
Score = 58.9 bits (141), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 1692 ARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN-ILHDKQFQL 1750
R A E + +V + + N+ RT + F +A+ + ++
Sbjct: 10 GRPTAGEFAAMEKMPVTVVLDNVRSLQNVGAFFRTGDAFAVEHIALCGITAVPPNRDIHK 69
Query: 1751 ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVL 1808
++ AE VP + + ++R +G+ VL +EQ ++ LD + K LV
Sbjct: 70 TALGAELTVPWSYY--ETTEACIDRLHADGYEVLAVEQVEGAVMLDVFRAAPGVKYALVF 127
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E G+ + D IEIPQ G S+NV VSG + LW + R+
Sbjct: 128 GNEVMGVGQSAVDRCDGAIEIPQAGTKHSINVAVSGGVVLWSFFRR 173
>gi|334364826|ref|ZP_08513804.1| RNA methyltransferase, TrmH family, group 3 [Alistipes sp. HGB5]
gi|390947737|ref|YP_006411497.1| rRNA methylase [Alistipes finegoldii DSM 17242]
gi|313158993|gb|EFR58370.1| RNA methyltransferase, TrmH family, group 3 [Alistipes sp. HGB5]
gi|390424306|gb|AFL78812.1| rRNA methylase, putative, group 3 [Alistipes finegoldii DSM 17242]
Length = 243
Score = 58.9 bits (141), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E + V++ + + N +AR+ E A GL N + I +A
Sbjct: 84 LERVPEDETPLVVIFDGVTDVRNFGAIARSAECAGAHGLITPLKNSA-PVNAEAIRSSAG 142
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
I V SI++ ++ + EGF ++ + + + D F K T LV+G E GI
Sbjct: 143 ALTAIPVCRVGSIRNTVKLLQTEGFQIVAATEKSRKLLYDAD-FRKPTALVMGAEDTGIS 201
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+++ + D + IP +G + SLNV + A+ L+E RQ+
Sbjct: 202 KEVLKLCDEQLAIPLIGHIESLNVSAAAAVMLFEAVRQR 240
>gi|411120571|ref|ZP_11392943.1| rRNA methylase, putative, group 3 [Oscillatoriales cyanobacterium
JSC-12]
gi|410709240|gb|EKQ66755.1| rRNA methylase, putative, group 3 [Oscillatoriales cyanobacterium
JSC-12]
Length = 346
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
AS Q ++VA I NL + RT E A GL I Q + + +TA +
Sbjct: 169 ASDQPVLIVADGITDPHNLGAIIRTAEAMGAQGLVI--------PQRRAVGITAT----V 216
Query: 1762 VEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGR 1810
+V +++ F LE K GF + GL A S PL + F T LV+G
Sbjct: 217 AKVAAGALESFSVARVVNLSRALEELKAAGFWIYGLASEA-SQPLQKTEFSGATALVVGA 275
Query: 1811 EKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E EG+ + I D + I G SLN V+ +A++E RQ++
Sbjct: 276 EGEGLSLLIQRSCDHLVTISLAGKTPSLNASVAAGMAIYEIYRQRQ 321
>gi|441499740|ref|ZP_20981915.1| TRNA/rRNA methyltransferase [Fulvivirga imtechensis AK7]
gi|441436480|gb|ELR69849.1| TRNA/rRNA methyltransferase [Fulvivirga imtechensis AK7]
Length = 182
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEI 1829
F+ K G+ ++ +EQ S+ LD+++ KK LV G E G+ ++ D CIEI
Sbjct: 90 FVLELKSRGYEIISIEQVDKSVMLDKFIPEKGKKYCLVFGNEVFGVDEKVVQNSDICIEI 149
Query: 1830 PQLGVVRSLNVHVSGAIALWEY 1851
PQ G SLN+ VS I +W++
Sbjct: 150 PQYGTKHSLNISVSVGIVVWDF 171
>gi|158338300|ref|YP_001519477.1| RNA methyltransferase [Acaryochloris marina MBIC11017]
gi|158308541|gb|ABW30158.1| RNA methyltransferase, TrmH family, group 3 [Acaryochloris marina
MBIC11017]
Length = 309
Score = 58.9 bits (141), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 1688 QVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
+ L +L + A+ + ++ A I NL + RT E A G+ I +
Sbjct: 135 EYLDISTLIEQANAATPKPVIIAADSITDPHNLGAMIRTAEALGAQGVIIP-----QRRA 189
Query: 1748 FQLISVTAEKWVPIVEV----PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
+ SV A+ +E V ++ LE+ K GF + GL +A + F +
Sbjct: 190 AGITSVVAKVATGALETLAIARVVNLNQGLEQLKKAGFWIYGLSTSAPQ-SIHTVTFTEP 248
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
TVLV+G E G+ V H D + IP G SLN V+ +AL+E RQ+
Sbjct: 249 TVLVIGAEGPGLSVSTQHHCDQMVSIPLQGKTASLNASVATGMALYEVYRQR 300
>gi|226327607|ref|ZP_03803125.1| hypothetical protein PROPEN_01478 [Proteus penneri ATCC 35198]
gi|225204133|gb|EEG86487.1| RNA methyltransferase, TrmH family [Proteus penneri ATCC 35198]
Length = 229
Score = 58.9 bits (141), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA--EKWVPIVEVPVNSIKHFLERK 1776
N+A + RT + A G+ A +K L+S A WV + P +I +
Sbjct: 21 NVAAVIRTAD---AVGIPKIHAIWPEEKMRMLVSPAAGSNSWVNVETHP--TITDAVGAF 75
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+ +G VL + ++ + + + T +++G+EK GI D I + D I +P +G+V+
Sbjct: 76 RTQGMQVLATHLSDKAVDFREIDYTRPTCIIMGQEKTGISQDAIALADQDIIVPMMGMVQ 135
Query: 1837 SLNVHVSGAIALWEYTRQQR 1856
SLNV V+ A+ L+E RQ++
Sbjct: 136 SLNVSVASALILYEAQRQRQ 155
>gi|451340106|ref|ZP_21910609.1| hypothetical protein C791_7993 [Amycolatopsis azurea DSM 43854]
gi|449417145|gb|EMD22827.1| hypothetical protein C791_7993 [Amycolatopsis azurea DSM 43854]
Length = 172
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 30/145 (20%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A ++V WVP N+++
Sbjct: 40 NLGTLLRTCDAVGAC-----------------LAVPKFPWVPEALRRGNTLRRPACVHWV 82
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+L R+K G +++G+E S+ L D +T+ VLG E++GIP + + +LD
Sbjct: 83 HDPPGWLTREKAAGTAIVGVELADESVRLADLPPARGRTIAVLGHEQQGIPPEALDLLDT 142
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWE 1850
+EIP +G SLNV V+G++ L++
Sbjct: 143 VVEIPMVGTGASLNVAVAGSLVLYK 167
>gi|428203166|ref|YP_007081755.1| rRNA methylase [Pleurocapsa sp. PCC 7327]
gi|427980598|gb|AFY78198.1| rRNA methylase, putative, group 3 [Pleurocapsa sp. PCC 7327]
Length = 312
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + +A++ E++ +++A I NL + RT E F A GL I
Sbjct: 125 ELADLIERAKATTPESV-------IVIADGITDPHNLGAIIRTAEAFGAQGLIIP----- 172
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + +T+ +++V +++HF LE K GF + G +
Sbjct: 173 ---QRRAAGITST----VMKVAAGALEHFPVARVVNLTRALEELKQSGFWIYG-TAAGSG 224
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
PL + LV+G E EG+ + D + IP G SLN VS AIAL+E
Sbjct: 225 KPLHSIKWHGAIGLVIGSEGEGLSLLTQRSCDELVTIPLAGKTPSLNASVSAAIALYEIY 284
Query: 1853 RQQ 1855
RQ+
Sbjct: 285 RQR 287
>gi|72382102|ref|YP_291457.1| RNA methyltransferase TrmH [Prochlorococcus marinus str. NATL2A]
gi|72001952|gb|AAZ57754.1| RNA methyltransferase TrmH, group 3 [Prochlorococcus marinus str.
NATL2A]
Length = 416
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+ E A GL + ++ A + +P+ V VN + LE+ K
Sbjct: 257 NLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAGALEHLPVARV-VN-LNRSLEKLK 314
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EG++V+GL + +S L + F V+V+G E +GI + + D + IP GV S
Sbjct: 315 DEGYTVVGLAEEGSST-LSEIKFQGPLVVVVGSEDKGISLITRRLCDQLVRIPLKGVTTS 373
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ +I L+E R +
Sbjct: 374 LNASVATSIFLYEVARSK 391
>gi|398796171|ref|ZP_10555799.1| rRNA methylase [Pantoea sp. YR343]
gi|398204023|gb|EJM90835.1| rRNA methylase [Pantoea sp. YR343]
Length = 231
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 1764 VPVNSIKHFLERKKH---EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V V + +H + +H EG VL +A ++ + + K T +++G+EK GI + +
Sbjct: 71 VKVKTHQHIADAVRHLKDEGMQVLATNLSAKAVDFREIDYTKPTCILMGQEKTGITSEAL 130
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ D I +P +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 131 ALADQDIIVPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|365121651|ref|ZP_09338567.1| hypothetical protein HMPREF1033_01913 [Tannerella sp. 6_1_58FAA_CT1]
gi|363645141|gb|EHL84415.1| hypothetical protein HMPREF1033_01913 [Tannerella sp. 6_1_58FAA_CT1]
Length = 175
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+++ EG+ V +EQ NSI L K K +VLG E +G+ ++ D IEIP
Sbjct: 90 VDKLHEEGYIVYAIEQVENSIILSDLQLNKDCKYAVVLGNEVKGVQQSVVDKCDQSIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWEYTRQQR 1856
Q G SLNV V+ + +W++ + R
Sbjct: 150 QFGTKHSLNVSVTAGLVIWDFFKMLR 175
>gi|422323947|ref|ZP_16404984.1| hypothetical protein HMPREF0737_00094 [Rothia mucilaginosa M508]
gi|353344740|gb|EHB89041.1| hypothetical protein HMPREF0737_00094 [Rothia mucilaginosa M508]
Length = 267
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+I+ F+ + EG ++G++ +S+PL+ Y PKK VLV G+E G+ ++ +
Sbjct: 173 TIEDFVAWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTL 232
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I Q G RS+N + IA+ + R+ F
Sbjct: 233 SIEQFGSTRSMNAATAAGIAMHAWVRRHVF 262
>gi|283457160|ref|YP_003361728.1| rRNA methylase [Rothia mucilaginosa DY-18]
gi|283133143|dbj|BAI63908.1| rRNA methylase [Rothia mucilaginosa DY-18]
Length = 253
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+I+ F+ + EG ++G++ +S+PL+ Y PKK VLV G+E G+ ++ +
Sbjct: 159 TIEDFVAWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTL 218
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I Q G RS+N + IA+ + R+ F
Sbjct: 219 SIEQFGSTRSMNAATAAGIAMHAWVRRHVF 248
>gi|255326412|ref|ZP_05367494.1| tRNA/rRNA methyltransferase [Rothia mucilaginosa ATCC 25296]
gi|255296452|gb|EET75787.1| tRNA/rRNA methyltransferase [Rothia mucilaginosa ATCC 25296]
Length = 251
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
+I+ F+ + EG ++G++ +S+PL+ Y PKK VLV G+E G+ ++ +
Sbjct: 157 TIEDFVAWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTL 216
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I Q G RS+N + IA+ + R+ F
Sbjct: 217 SIEQFGSTRSMNAATAAGIAMHAWVRRHVF 246
>gi|374298531|ref|YP_005050170.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551467|gb|EGJ48511.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 196
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 1697 METIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA 1755
+ + A RQ+ LV + N++ + R+C+ F + + Q S +A
Sbjct: 13 IRQVLARRQKGLTLVIDNVHDPHNVSAILRSCDAFGVPSVHLYYTTSAFPVLGQKSSASA 72
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGI 1815
KWV + + K + F VL + + PL + T ++LG E G
Sbjct: 73 RKWV--MRTRHSDATSMYRGLKDQNFQVLATGFSERAKPLTAWDLSAPTAVILGNEHNGA 130
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++ + D I IP +G+V+SLNV V+ AI L+E RQ+
Sbjct: 131 SPELAQVADGEIYIPMMGMVQSLNVSVAAAIILYEAWRQR 170
>gi|332667598|ref|YP_004450386.1| tRNA/rRNA methyltransferase SpoU [Haliscomenobacter hydrossis DSM
1100]
gi|332336412|gb|AEE53513.1| tRNA/rRNA methyltransferase (SpoU) [Haliscomenobacter hydrossis DSM
1100]
Length = 178
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 1780 GFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+ VL +EQ NS L+QY P K +V G E G+ +++ ++D +EIPQ G S
Sbjct: 99 GWQVLAVEQAENSTSLEQYTPPPNAKLAVVFGNEVSGVSDEVMDIVDGALEIPQYGTKHS 158
Query: 1838 LNVHVSGAIALWE 1850
LN+ V I +WE
Sbjct: 159 LNIAVCVGIVVWE 171
>gi|262037386|ref|ZP_06010850.1| RNA methyltransferase, TrmH family, group 3 [Leptotrichia
goodfellowii F0264]
gi|261748548|gb|EEY35923.1| RNA methyltransferase, TrmH family, group 3 [Leptotrichia
goodfellowii F0264]
Length = 244
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
FD L+ E + A + V++ I N + R+ E F G+ I D N +
Sbjct: 80 FDYYLELTEF-FEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECFGVDGIVIQDRNNVKV 138
Query: 1746 KQFQLISVT-AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+ + S T A + V I++V +I +++ K G+ V G E ++ ++ +PKK
Sbjct: 139 TETVVKSSTGAIEHVDIIKV--TNISDTIDKFKKYGYKVYGAEADGENLYYEE-SYPKKV 195
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
LVLG E G+ + D ++I G SLNV V+G I L E ++
Sbjct: 196 CLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMSK 244
>gi|332299037|ref|YP_004440959.1| TrmH family RNA methyltransferase [Treponema brennaborense DSM 12168]
gi|332182140|gb|AEE17828.1| RNA methyltransferase, TrmH family, group 3 [Treponema brennaborense
DSM 12168]
Length = 262
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD----ANILHDKQFQLISVTAEK 1757
A RQ V++ S+ D N+ + R+C+ S + + N+ + S A
Sbjct: 109 AERQTVVVLDSVTDP-HNIGAILRSCDQLGVSLAVLPERRGVKNVDGSEVISRASAGASA 167
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
WVPI + N ++ + + K GF + G + + P+ FP +TVL++G E GI
Sbjct: 168 WVPI-SIASNLVRA-VGQLKAAGFWIYGAD--SGGTPVTDVDFPPRTVLIMGSEGSGISR 223
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ D + IP G + SLNV V+ I L++ R+
Sbjct: 224 LLAEQCDRIVSIPTCGKLDSLNVSVAAGILLYDIYRK 260
>gi|119775658|ref|YP_928398.1| putative methyltransferase [Shewanella amazonensis SB2B]
gi|119768158|gb|ABM00729.1| putative tRNA/rRNA methyltransferase [Shewanella amazonensis SB2B]
Length = 333
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL + R+C F +G+ + +A +L Q + TAE + VE + + + L+ +
Sbjct: 199 NLGAIMRSCAHFGVAGIVMTEAGLL---QSGAAARTAEGGMEHVEGIRCDRLTDALQLCR 255
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+S++ L + P + V+V G E +G+ + D ++IP G+V S
Sbjct: 256 DAGYSIITTSSHGGE-SLYRSKLPARVVVVFGEEMDGVSKAVASRADIGVQIPGTGLVES 314
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LNV V+ ++ L E+ RQQ
Sbjct: 315 LNVSVAASLILGEWYRQQ 332
>gi|30063982|ref|NP_838153.1| methyltransferase [Shigella flexneri 2a str. 2457T]
gi|384544207|ref|YP_005728270.1| putative rRNA methylase [Shigella flexneri 2002017]
gi|415857528|ref|ZP_11532228.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2a str. 2457T]
gi|417703334|ref|ZP_12352442.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-218]
gi|417708663|ref|ZP_12357692.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri VA-6]
gi|417713639|ref|ZP_12362603.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-272]
gi|417718480|ref|ZP_12367375.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-227]
gi|417723735|ref|ZP_12372541.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-304]
gi|417727653|ref|ZP_12376385.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-671]
gi|417734623|ref|ZP_12383272.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2747-71]
gi|417739476|ref|ZP_12388053.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 4343-70]
gi|417743779|ref|ZP_12392310.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2930-71]
gi|417829018|ref|ZP_12475567.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri J1713]
gi|418257725|ref|ZP_12881275.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 6603-63]
gi|420321501|ref|ZP_14823327.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2850-71]
gi|420332433|ref|ZP_14834084.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-1770]
gi|30042238|gb|AAP17963.1| hypothetical protein S2816 [Shigella flexneri 2a str. 2457T]
gi|281601993|gb|ADA74977.1| putative rRNA methylase [Shigella flexneri 2002017]
gi|313648260|gb|EFS12704.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2a str. 2457T]
gi|332753991|gb|EGJ84365.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 4343-70]
gi|332755829|gb|EGJ86187.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2747-71]
gi|332761975|gb|EGJ92248.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-671]
gi|332766583|gb|EGJ96788.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2930-71]
gi|333000441|gb|EGK20023.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri VA-6]
gi|333000847|gb|EGK20419.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-218]
gi|333001674|gb|EGK21241.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-272]
gi|333015950|gb|EGK35285.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-227]
gi|333016824|gb|EGK36150.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-304]
gi|335574491|gb|EGM60815.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri J1713]
gi|391247188|gb|EIQ06441.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 2850-71]
gi|391249428|gb|EIQ08660.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-1770]
gi|397896610|gb|EJL13027.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri 6603-63]
Length = 345
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKW 1758
I+A Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 191 IQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHV 250
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
PI ++I + L+ + G++V+ + PL + P K VLVLG+E EG+P
Sbjct: 251 QPITG---DNIVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 306
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344
>gi|193214688|ref|YP_001995887.1| tRNA guanosine-2'-O-methyltransferase [Chloroherpeton thalassium ATCC
35110]
gi|193088165|gb|ACF13440.1| tRNA guanosine-2'-O-methyltransferase [Chloroherpeton thalassium ATCC
35110]
Length = 219
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD--KQFQLISVTAEKWVPIVEV 1764
+V +++ NLA + RTC+ A G+ A L + Q + A +WV +V
Sbjct: 23 LTVVMENVNKAHNLAAIIRTCD---AVGIPKVHAVALRPEIRTKQNSASGANRWV---DV 76
Query: 1765 PV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
+ NS + + GF + + + F K T LV+G E EGI I +
Sbjct: 77 QIHNSTEDVFSTLRQGGFQIFVAHFSPQATDFRAVDFTKPTALVVGAEWEGISETAISLA 136
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D + +P +G+V SLNV V+ AI L+E RQ+
Sbjct: 137 DGSLYVPMVGMVESLNVSVATAIMLFEAQRQR 168
>gi|372221774|ref|ZP_09500195.1| tRNA/rRNA methyltransferase SpoU [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 218
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 1691 QARSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQ 1749
+ R + I ++R ++ VA + ++ N + + R+C+ F + + + + + +
Sbjct: 16 EERKVRFLEILSNRTNYLTVAIEDVYQLHNTSAVIRSCDAFGVQTVHVVE-DRFGKRLDK 74
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
I++ A++WV VE N+ K + + K +G+ + N + L + F +KT L G
Sbjct: 75 NIAMGAQQWVD-VERYANT-KDCITQLKQKGYQIWATTPHGNCVDLPDFNFTQKTALFFG 132
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAI 1846
E+ G+ +++ D +++P +G SLNV V AI
Sbjct: 133 TERTGLSQEVLDQADGFLKVPMVGFSESLNVSVCAAI 169
>gi|416831196|ref|ZP_11899047.1| putative methyltransferase [Escherichia coli O157:H7 str. LSU-61]
gi|320667558|gb|EFX34478.1| putative methyltransferase [Escherichia coli O157:H7 str. LSU-61]
Length = 345
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A Q VLV NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAGAQDCVLVLENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI ++I + L+ + G++V+ + PL + P K VLVLG+E EG+P
Sbjct: 252 PITG---DNIVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 308 RDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344
>gi|343928549|ref|ZP_08767996.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343761560|dbj|GAA14922.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
Length = 228
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
+++ L+ + EG SV+ ++ T S PL+ P++ VL+ G+E G+ D D
Sbjct: 133 DTVGDLLDWARGEGLSVVAVDNTPGSRPLETVELPRECVLLFGQEGPGVSDDAQRQADMT 192
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ I Q G RS+N V+ IA+ + RQ
Sbjct: 193 VSIAQFGSTRSINAGVAAGIAMHAWIRQH 221
>gi|22002552|gb|AAM82703.1| rRNA methylase-like protein [Synechococcus elongatus PCC 7942]
Length = 258
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIP---NLAGLARTCEVFKASGLAIADANIL 1743
D V+ RS A AS F L+A ++ + NL + RT A GL + +
Sbjct: 90 DGVVANRSTAAP---ASTAHFSLLADAVETLQDPGNLGTIIRTAAAAGADGLWLTADGVD 146
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
D +++ +A +W + + L + +G+ ++ A + L Q +
Sbjct: 147 PDHP-KVLRASAGQWFRLPIAIATDLGQTLRSWQQQGYQIVSTLPRATTT-LWQADLTRP 204
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
TVL+LG E G+ D+ + D+ + IPQ V SLNV ++ A+ L+E RQ++
Sbjct: 205 TVLLLGNEGAGLSPDLAAIADSAVTIPQAAGVESLNVAIAAALLLYEARRQRQ 257
>gi|406959488|gb|EKD86818.1| hypothetical protein ACD_37C00136G0003 [uncultured bacterium]
Length = 177
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAI-ADANILHDKQFQLISVTAEKWVP--IVE 1763
++++ +++D N+ + R + A + + ++ + + + S+ +WV E
Sbjct: 28 YIILDNVLDTY-NIGAIFRLADAVAAKKVILCGESEVPPHTRIKKASINTTEWVTWEYAE 86
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V +IK+ + + +V+ +EQ+ S+ D++ + VLV+G E +G+ +++ +
Sbjct: 87 TAVLAIKNL--KLEIGNLTVVAIEQSPKSVAYDEFDYQFPLVLVVGHESDGVSNEVLKIA 144
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
DA +EIP GV +SLNV VS I L++ + R
Sbjct: 145 DAIVEIPMWGVNKSLNVMVSLGIVLFKAMEKSR 177
>gi|377566100|ref|ZP_09795372.1| putative RNA methyltransferase [Gordonia sputi NBRC 100414]
gi|377526815|dbj|GAB40537.1| putative RNA methyltransferase [Gordonia sputi NBRC 100414]
Length = 235
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
R ++ I A R F + N+ + RT F AS + I + + +
Sbjct: 72 REAIVDDIDARRHPFHVAIENFAHDANIGTVVRTANAFAASAVHIVGRRRWNRRG----A 127
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
+ +++ + +S+ + + G +V+ ++ T S+PL+ P++ VL+ G+E
Sbjct: 128 MVTDRYQHLQHH--DSVSELMTWARENGLAVVAVDNTPGSVPLETADLPRECVLLFGQEG 185
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
G+ D D + I Q G RS+N V+ IA+ + RQ
Sbjct: 186 PGVSDDAQAQADLTVSIAQFGSTRSINAGVAAGIAMHAWIRQH 228
>gi|260902542|ref|ZP_05910937.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ4037]
gi|308109724|gb|EFO47264.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ4037]
Length = 227
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI--SVTA 1755
+ ++A + L + + N++ + RT + A+GL A I DK L S A
Sbjct: 11 QVLKARQTDLTLCLEEVHKPNNVSAIIRTAD---ATGLHKVHA-IWPDKMRTLTHTSAGA 66
Query: 1756 EKWVPIVEVPV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
WV EV NSI+ + K +G VL + ++ + + K T ++LG EK G
Sbjct: 67 RNWV---EVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKIG 123
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 124 ASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|260063174|ref|YP_003196254.1| spoU protein [Robiginitalea biformata HTCC2501]
gi|88783268|gb|EAR14440.1| spoU protein [Robiginitalea biformata HTCC2501]
Length = 217
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 1691 QARSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDK--- 1746
Q R+ +E + A+R +++ VA + ++ N + + R+C++F I DA+++ ++
Sbjct: 16 QRRNRFLEVL-ANRTRYITVALQDVYQLHNASAVIRSCDIF-----GIQDAHLIEERFGN 69
Query: 1747 -QFQLISVTAEKWVPIVEVP-VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+ I++ A++WV I ++ H L K G+ ++ S+ +
Sbjct: 70 RLDKNIAMGAQRWVDIHRYKSTDACVHALREK---GYRIVATSPHQGSVSPEALPLDTPV 126
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ G EKEG+ +I DA I+IP +G SLNV V+ AI L E
Sbjct: 127 AVFFGTEKEGLSEGLIRQADAAIQIPMVGFTESLNVSVAAAIVLRE 172
>gi|42522737|ref|NP_968117.1| RNA methylase [Bdellovibrio bacteriovorus HD100]
gi|39573933|emb|CAE79110.1| putative RNA methylase [Bdellovibrio bacteriovorus HD100]
Length = 238
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K++G+ + AN+ PL + F KT LVLG E++G+ ++I D I IP G V+
Sbjct: 115 KNQGYKIYVTHLDANAKPLHEIDFSGKTALVLGNERDGVTPEMIAAADQTIIIPMTGFVQ 174
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
S N+ V+GA+ L+ ++ +
Sbjct: 175 SFNISVAGALGLYHISQDR 193
>gi|333379158|ref|ZP_08470882.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas mossii DSM
22836]
gi|332885426|gb|EGK05675.1| RNA methyltransferase, TrmH family, group 3 [Dysgonomonas mossii DSM
22836]
Length = 246
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP--I 1761
+ F+LV I + N +ARTCEV A DA ++ K ++ A K +
Sbjct: 94 KDPFILVLDGITDVRNFGAIARTCEV------AGVDAIVIPAKGSVTVNADAIKTSAGAL 147
Query: 1762 VEVPV---NSIKHFLERKKHEGFSVLG-LEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
+++PV S+ + ++ K+ G V+ E+ A+ Y P V+G E G+
Sbjct: 148 LKIPVCKEQSLTNAIQFLKNSGIKVVAATERGADDYTAVDYSGP--IAFVMGAEDTGVSN 205
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
D + + D ++IPQ G + SLNV V+ + ++E RQ+
Sbjct: 206 DNLRIADNLVKIPQFGTIGSLNVSVAAGVLIYEVIRQK 243
>gi|262040314|ref|ZP_06013565.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042423|gb|EEW43443.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 131
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 1725 RTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKKHEGFSV 1783
R+C F G+ + DA +L TAE VE + +S L++ + G+++
Sbjct: 2 RSCAHFGVKGVVVQDAGVLESGAAIR---TAEGGAEHVEPITGDSFIDTLDQFRKAGYAI 58
Query: 1784 LGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVS 1843
+ + N PL + PKK VL LG+E++G+ I D + I G V SLNV V+
Sbjct: 59 VST-SSHNGTPLFKAELPKKMVLALGQERDGLSDAAISSADLSVAIDGTGNVESLNVSVA 117
Query: 1844 GAIALWEYTRQQR 1856
+ L E+ RQ +
Sbjct: 118 TGVLLAEWWRQNK 130
>gi|119513673|ref|ZP_01632675.1| rRNA methylase [Nodularia spumigena CCY9414]
gi|119461678|gb|EAW42713.1| rRNA methylase [Nodularia spumigena CCY9414]
Length = 261
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
D V+ A+ + VL I NL + RT A+GL ++D ++ D
Sbjct: 91 DGVVATAQRAINQTQVPFTGLVLALETIQDPGNLGTIIRTAAATGATGLWLSDDSVDLDS 150
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
+++ +A +W + +K +++ + G V+ TAN D + K +++
Sbjct: 151 P-KVLRASAGQWFRVATAVSQDLKATIQQSQQAGMQVVATLPTANLTYWD-VDWRKPSLI 208
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+LG E G+ D+ M D ++IP V SLNV ++ A+ ++E RQ
Sbjct: 209 LLGNEGAGLSPDLASMADKQVKIPLSSGVESLNVAIAAALMMYEAQRQ 256
>gi|294155831|ref|YP_003560215.1| tRNA/rRNA methylase [Mycoplasma crocodyli MP145]
gi|291600376|gb|ADE19872.1| tRNA/rRNA methylase [Mycoplasma crocodyli MP145]
Length = 233
Score = 58.9 bits (141), Expect = 3e-05, Method: Composition-based stats.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 30/229 (13%)
Query: 1641 KDSLLD-------FQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQAR 1693
K+S+LD QK + L HEN + F N +++ +K DEL ++ Q
Sbjct: 9 KNSVLDALQNNWPIQKVLLL--HENNKH----LFKNVNFPVEVVRRDKFDELTNENHQGF 62
Query: 1694 SLAMETIR--------ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD 1745
++ I + VLV I NL + R+ A+ + + D
Sbjct: 63 IALIKEINYDNLNSLINDNPKLVLVLDHIQDPHNLGAVIRS-----ANAAGVKHIILPRD 117
Query: 1746 KQFQL----ISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
+ ++ I V++ ++ I + VNSI + K+ GF V NS +Q +P
Sbjct: 118 RSAEINSTVIKVSSGGFIGIKFIRVNSISATITWLKNNGFWVFSSALDKNSKKHNQINYP 177
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
K+VLV+G E G+ +++ D I I Q G V+SLNV V+ I L+E
Sbjct: 178 YKSVLVVGNEGSGVSKSTLNVCDETIYIEQFGSVQSLNVSVATGILLFE 226
>gi|124025638|ref|YP_001014754.1| RNA methyltransferase TrmH, group 3 [Prochlorococcus marinus str.
NATL1A]
gi|123960706|gb|ABM75489.1| RNA methyltransferase TrmH, group 3 [Prochlorococcus marinus str.
NATL1A]
Length = 442
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+ E A GL + ++ A + +P+ V VN + LE+ K
Sbjct: 283 NLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAGALEHLPVARV-VN-LNRSLEKLK 340
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EG++V+GL + +S L + F V+V+G E +GI + + D + IP GV S
Sbjct: 341 DEGYTVVGLAEEGSST-LSEIKFQGPLVVVVGSEDKGISLITRRLCDQLVRIPLKGVTTS 399
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ +I L+E R +
Sbjct: 400 LNASVATSIFLYEVARSK 417
>gi|406920118|gb|EKD58239.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 205
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
DK + ++ AE+ V + + + LE K E FS++ LE+ +SI + +Y
Sbjct: 99 DKMIEKTALGAEQSVSWEKC--DDLGKLLESLKEENFSIVALEKNDDSIDIRKYDKKFPM 156
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
++LG E +G+ ++ DA + IP G SLNV V+ IA++E
Sbjct: 157 AIILGNEVDGVDQSVLEKCDAVVSIPMRGKKESLNVSVAAGIAMYE 202
>gi|311278485|ref|YP_003940716.1| tRNA/rRNA methyltransferase SpoU [Enterobacter cloacae SCF1]
gi|308747680|gb|ADO47432.1| tRNA/rRNA methyltransferase (SpoU) [Enterobacter cloacae SCF1]
Length = 352
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQ-FQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + R+C F G+ + DA +L + AE PI +S+ +E+ +
Sbjct: 217 NLGAMMRSCAHFGVKGVLLQDAALLESGAAIRTAEGGAEHVQPITG---DSVLEAIEQFR 273
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++++ + PL + P+K VLVLG+E++G+ + D + I G V S
Sbjct: 274 SAGYTIV-TTSSHEGTPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSINGTGNVES 332
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LNV V+ + L E+ RQ +
Sbjct: 333 LNVSVATGVLLAEWWRQNK 351
>gi|377559528|ref|ZP_09789077.1| putative RNA methyltransferase [Gordonia otitidis NBRC 100426]
gi|377523349|dbj|GAB34242.1| putative RNA methyltransferase [Gordonia otitidis NBRC 100426]
Length = 224
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
S+ + + EG +V+ ++ T S+PL+ P+ VL+ G+E G+ D D +
Sbjct: 130 SVSELMAWAREEGLAVVAVDNTPGSVPLETADLPRDCVLLFGQEGPGVSDDAQAQADLTV 189
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I Q G RS+N V+ IA+ + RQ
Sbjct: 190 SIAQFGSTRSINAGVAAGIAMHAWVRQH 217
>gi|373498981|ref|ZP_09589476.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp. 12_1B]
gi|371959679|gb|EHO77356.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp. 12_1B]
Length = 151
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 1705 QQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVE 1763
+ VL+ I N L R+ EVF G+ I + N + ++ S A + V IV+
Sbjct: 3 KSIVLILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRVNETVVKTSTGAIEHVDIVK 62
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V +I L + K + V G E S + +P +T LVLG E GI +
Sbjct: 63 V--TNISEALLKLKKLDYWVYGAEGEG-SKDYSKEKYPSRTALVLGSEGNGIRKKVKENC 119
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
D I+IP G + SLNV V+G I L E +
Sbjct: 120 DVLIKIPMYGKINSLNVSVAGGIILSEIVK 149
>gi|378581041|ref|ZP_09829692.1| putative methyltransferase [Pantoea stewartii subsp. stewartii DC283]
gi|377816339|gb|EHT99443.1| putative methyltransferase [Pantoea stewartii subsp. stewartii DC283]
Length = 371
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A + VL + NL + R+C F GL + DA++L TAE
Sbjct: 219 KAESKDCVLALEDVSNPHNLGAIMRSCAHFGVKGLLVNDASLLESGA---AVRTAEGGAE 275
Query: 1761 IVE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
V+ + + L+ + G++++ + PL + P K VLVLG+E+EG+
Sbjct: 276 HVQAISGTTFTQGLDAFRKAGYTIV-TTSSHQGTPLSEAELPAKMVLVLGQEREGLSDST 334
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D + I G V SLNV V+ + L E+ RQ
Sbjct: 335 FQQGDMSLSIGGTGNVESLNVSVATGVLLAEWWRQ 369
>gi|434394316|ref|YP_007129263.1| RNA methyltransferase, TrmH family, group 3 [Gloeocapsa sp. PCC 7428]
gi|428266157|gb|AFZ32103.1| RNA methyltransferase, TrmH family, group 3 [Gloeocapsa sp. PCC 7428]
Length = 313
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD--AN 1741
+L + + QA+++A + ++ A I NL + RT E A GL I A
Sbjct: 140 DLGELIEQAKAIAESPV-------IVAAEGITDPHNLGAIIRTAEAIGAQGLVIPQRRAA 192
Query: 1742 ILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFP 1801
+ + + EK+ P+ V VN LE K GF + G TA S PL F
Sbjct: 193 GITSSVMKAAAGALEKF-PVARV-VN-FSRALEELKEAGFWIYGTAATA-SQPLHTVQFT 248
Query: 1802 KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
VLV+G E EG+ + D + IP LG SLN V+ +AL+E RQ+
Sbjct: 249 GPVVLVIGAEGEGLSLLTQRCCDVLVSIPLLGDTPSLNASVAAGMALYEIFRQR 302
>gi|340350273|ref|ZP_08673269.1| SpoU family RNA methylase [Prevotella nigrescens ATCC 33563]
gi|339608802|gb|EGQ13686.1| SpoU family RNA methylase [Prevotella nigrescens ATCC 33563]
Length = 185
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 1688 QVLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-D 1745
+ ++ L++E + SR+ V+V + + N+ + R+C+ F+ + + +
Sbjct: 5 RTIEMNRLSLEEFKQSRKLPLVVVLDDVRSLYNVGSVFRSCDAFRIEAIYLCGITATPPN 64
Query: 1746 KQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLD---QYMFP- 1801
+ ++ AE V ++ + + + K G+ V +EQ S L +++ P
Sbjct: 65 AEIHKTALGAENSVDWQYF--SNAEDAVTQLKDNGYFVYSVEQVEGSNALQDLSEHISPI 122
Query: 1802 -------KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
K +VLG E +G+ ++ + D C+EIPQ G SLNV V+ I +WE+ R
Sbjct: 123 NNDATTQKHYAVVLGNEVKGVHQSVVDLSDGCLEIPQFGTKHSLNVSVTAGIVVWEFAR 181
>gi|333993298|ref|YP_004525911.1| TrmH family RNA methyltransferase [Treponema azotonutricium ZAS-9]
gi|333735527|gb|AEF81476.1| RNA methyltransferase, TrmH family, group 3 [Treponema azotonutricium
ZAS-9]
Length = 242
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 1710 VASLIDRIP---NLAGLARTCEVFKASGLAIADANIL-HDKQFQLISVTAEKWVPIVEVP 1765
+A ++D I N + R+C+ F + + I H + S A WVP E
Sbjct: 93 LAVVLDEITDPHNYGAILRSCDQFGVDIVITRNRRIAKHAEVISKTSAGASAWVPSAETA 152
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
++ +E K GF + G + S D+ + +T L+ G E GI + DA
Sbjct: 153 --NLPRAVEDLKQAGFWIYGADMGGES-SWDKDL-KGRTALIFGGEGTGISRLLRENCDA 208
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I IP LG + SLNV V+ I L+E TRQ++
Sbjct: 209 LISIPSLGRIDSLNVSVAAGILLYEVTRQKK 239
>gi|333895080|ref|YP_004468955.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
gi|332995098|gb|AEF05153.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
Length = 243
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 1693 RSLAMETIRASRQQFVLVA-SLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI 1751
R L + + A RQ + V + + N++ + RTC+ + I + + ++++Q
Sbjct: 5 RYLRIRSALAKRQTDLTVCLENVHKPHNVSAVVRTCD-----AIGIHRVHTVWEEKYQFR 59
Query: 1752 SVTA---EKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
TA ++WV + +S+ + + K +G VL + ++ + + K T ++
Sbjct: 60 GDTAMGSQQWVR--QTNHDSLGNAIGALKQQGMQVLVTHLSDTAVGFREVDYTKPTAIIF 117
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
G+E+ G + I M D I IP G+V+SLNV V+ A+ L+E RQ+
Sbjct: 118 GQERYGATDEAIAMADQDIIIPMAGMVQSLNVSVAAALVLYEAQRQREL 166
>gi|338732900|ref|YP_004671373.1| putative TrmH family tRNA/rRNA methyltransferase [Simkania negevensis
Z]
gi|336482283|emb|CCB88882.1| putative TrmH family tRNA/rRNA methyltransferase [Simkania negevensis
Z]
Length = 236
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 1700 IRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIA-DANILHDKQFQLISVTAEK 1757
+R S+++ +L+ I N + R E F G+ + + ++ SV A +
Sbjct: 83 LRTSKEKSLILMCDGITDPQNFGAILRAAECFGVDGVVFSKNRSVEITPVVTKASVGASE 142
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
VP++ V +++ + + + GF+ + + +S +D + FP KT+L+LG E G+
Sbjct: 143 LVPLLRV--SNLAETMNQFQKAGFTAIVADVGEHSKSIDTFTFPDKTLLILGAEGRGVQP 200
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+ D C+EIP G + SLNV + +I L++
Sbjct: 201 LLKKKADCCVEIPLKGQIDSLNVSQAASILLFK 233
>gi|295134598|ref|YP_003585274.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
gi|294982613|gb|ADF53078.1| TrmH family tRNA/rRNA methyltransferase [Zunongwangia profunda
SM-A87]
Length = 168
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEI 1829
++ KK E +S++ LE T NS+P+ Q +K VL+ G E GI D++ + D+ + I
Sbjct: 81 IIKGKKAEAYSIIALEITQNSVPIQQLELKPSEKVVLIAGHENFGISEDLLRLCDSIVHI 140
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTR 1853
P G S+NV + I+L+E T+
Sbjct: 141 PMFGNNSSMNVAQAIGISLYEITK 164
>gi|94986333|ref|YP_605697.1| tRNA (guanosine-2'-O-)-methyltransferase [Deinococcus geothermalis
DSM 11300]
gi|94556614|gb|ABF46528.1| tRNA (guanosine-2'-O-)-methyltransferase [Deinococcus geothermalis
DSM 11300]
Length = 216
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 17/171 (9%)
Query: 1693 RSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADA-----NILHDK 1746
R + + A RQ ++ +++ N + + RTC+ A G+ A A +L
Sbjct: 5 RYQKIRRVLARRQPTLTVLMDEVNKPHNFSAILRTCD---AVGVLTAHAVPPKSGVL--P 59
Query: 1747 QFQLISVTAEKWVPIVEVP--VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
F S +A KWV + P V +++ + G VL + S+ + + + T
Sbjct: 60 TFDATSGSAHKWVAVQRQPDAVTAVRQL----QAAGMQVLATHLSQRSLDYREPDYTRPT 115
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++LG EK G+ + + DA I IP G+V+SLNV V+ A L+E RQ+
Sbjct: 116 CVLLGAEKWGVSDEAAEIADANIVIPMFGMVQSLNVSVAAATILFEAQRQR 166
>gi|420342945|ref|ZP_14844415.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-404]
gi|391264953|gb|EIQ23933.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-404]
Length = 345
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKW 1758
I+A Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 191 IQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVLDAALLESGAAIRTAEGGAEHV 250
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
PI ++I + L+ + G++V+ + PL + P K VLVLG+E EG+P
Sbjct: 251 QPITG---DNIVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 306
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344
>gi|359764377|ref|ZP_09268223.1| putative RNA methyltransferase [Gordonia polyisoprenivorans NBRC
16320]
gi|359318123|dbj|GAB21056.1| putative RNA methyltransferase [Gordonia polyisoprenivorans NBRC
16320]
Length = 171
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 30/145 (20%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWV-PIVE----VPVNSIKH-- 1771
NL L RTC+ A ++V WV P + VP S H
Sbjct: 39 NLGTLLRTCDAVGAC-----------------MAVPPHDWVGPALRRGNTVPGRSCIHRT 81
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+LER++ G ++G+E + L D + ++TV+VLG E+ GIP ++ +LD
Sbjct: 82 GNPVRWLERERDAGAHLIGVELAEGATRLADLPIARRRTVVVLGHERTGIPESVLDVLDD 141
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWE 1850
+EIP +G SLNV VSG++ ++
Sbjct: 142 VVEIPMVGRGASLNVAVSGSLVAYK 166
>gi|359774707|ref|ZP_09278063.1| putative RNA methyltransferase [Gordonia effusa NBRC 100432]
gi|359308190|dbj|GAB20841.1| putative RNA methyltransferase [Gordonia effusa NBRC 100432]
Length = 191
Score = 58.5 bits (140), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIV-----EVPVNSIKH-- 1771
NL L RTC+ A ++V WV VP S H
Sbjct: 59 NLGTLLRTCDAIGAC-----------------MAVPPHDWVAEALRRGNTVPGRSCIHRA 101
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+L R++ G ++G+E + L D ++TV+VLG E+ GIP D++ +LD
Sbjct: 102 GNPHRWLAREREHGAHIVGVELAEGATRLADVRAARQRTVIVLGHERSGIPDDVLDLLDE 161
Query: 1826 CIEIPQLGVVRSLNVHVSGAI 1846
+EIP +G SLNV V+G++
Sbjct: 162 VVEIPMIGRGASLNVAVAGSL 182
>gi|256818854|ref|YP_003140133.1| tRNA/rRNA methyltransferase SpoU [Capnocytophaga ochracea DSM 7271]
gi|256580437|gb|ACU91572.1| tRNA/rRNA methyltransferase (SpoU) [Capnocytophaga ochracea DSM 7271]
Length = 180
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 P--IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGI 1815
VE ++++ E+ K + ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AWEYVENTLSAV----EKLKEQDVYIISIEQAENSTMLNDFQPNGKQKYAIIFGNEVKGV 134
Query: 1816 PVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D IEIPQ G SLN+ VS IA+WE + R
Sbjct: 135 EQEVVSTSDEVIEIPQYGTKHSLNISVSAGIAIWELAMKLR 175
>gi|365959943|ref|YP_004941510.1| tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC 49512]
gi|365736624|gb|AEW85717.1| tRNA/rRNA methyltransferase [Flavobacterium columnare ATCC 49512]
Length = 177
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYM--FPKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K E V +EQ N+I LDQ+ KK LV G E G+ + + + IEIP
Sbjct: 90 IENLKKEEVEVYAIEQVENAIFLDQFQPKLTKKYALVFGNEVFGVNQEAVKLCHGAIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWE 1850
QLG SLN+ VS I +W+
Sbjct: 150 QLGTKHSLNISVSTGIVVWD 169
>gi|419799895|ref|ZP_14325211.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis F0449]
gi|385696736|gb|EIG27206.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus
parasanguinis F0449]
Length = 242
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + S A + +PI V ++ +++ K
Sbjct: 108 NLGSILRTADATNVSGVIIPKHRAVGVTPVVSKTSTGAVEHIPIARV--TNLSQTIDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF + G + N P Q+ K L++G E +GI +I +D I IP G V+S
Sbjct: 166 EEGFWIFGTDM--NGTPSHQWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|157116025|ref|XP_001658345.1| hypothetical protein AaeL_AAEL007418 [Aedes aegypti]
gi|108876645|gb|EAT40870.1| AAEL007418-PA [Aedes aegypti]
Length = 451
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+ + + ++VASL++R PNL GLAR+ E+F + L +K+FQ +S+TAEKW+
Sbjct: 384 KGNVEGLIVVASLVNRAPNLGGLARSSEIFAVKQYIVNSLKDLENKEFQALSMTAEKWLN 443
Query: 1761 IVEV 1764
+ E+
Sbjct: 444 VAEL 447
>gi|404492275|ref|YP_006716381.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Pelobacter
carbinolicus DSM 2380]
gi|77544382|gb|ABA87944.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Pelobacter
carbinolicus DSM 2380]
Length = 246
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAI-ADANILHDKQFQLISVTAEKWVPIVEVPV 1766
+LV I NL LAR+ E G+ + D + + S A ++P+ V
Sbjct: 98 ILVLDGITDPHNLGALARSAEAVGCQGIVLPKDRSCPITAAAEKASAGALAYLPVCRV-- 155
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ LE K GF V GL A S L VLV+G E +G+ ++ DA
Sbjct: 156 TNVARSLEVFKQAGFWVYGLAGDAGSQSLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDAL 215
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ IP G V SLN V+G +AL+E RQQ
Sbjct: 216 LAIPMRGQVSSLNASVAGGVALFEVLRQQ 244
>gi|288928749|ref|ZP_06422595.1| RNA methylase, SpoU family [Prevotella sp. oral taxon 317 str. F0108]
gi|288329733|gb|EFC68318.1| RNA methylase, SpoU family [Prevotella sp. oral taxon 317 str. F0108]
Length = 177
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 17/162 (10%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVP 1760
AS+ V+V + + N+ + R+C+ F+ + + + ++ AE V
Sbjct: 20 ASKLPLVVVLDNVRSLHNVGSVLRSCDAFRVEAVYLCGITATPPSAEIHKTALGAEDSV- 78
Query: 1761 IVEVPVNSIKHFLERKKH------EGFSVLGLEQTANSIPLD--QYMFPKKTVLVLGREK 1812
+ K+F E G V +EQ AN+ L + ++ +VLG E
Sbjct: 79 -------TWKYFAETSDAVDELHANGTKVFAVEQVANATMLQSLETKGGERYAVVLGNEV 131
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+G+ ++ D C+EIPQ G SLNV V+ I +WE+ ++
Sbjct: 132 KGVQQTVVDRCDGCLEIPQFGTKHSLNVSVAAGIVVWEFAKK 173
>gi|170767257|ref|ZP_02901710.1| RNA methyltransferase, TrmH family [Escherichia albertii TW07627]
gi|170123591|gb|EDS92522.1| RNA methyltransferase, TrmH family [Escherichia albertii TW07627]
Length = 345
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P+K VLVLG+E EG+P D + I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTTLPEKMVLVLGQEYEGLPDAARDPNDVRVNIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLAEWWRQNK 344
>gi|433656470|ref|YP_007273849.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio parahaemolyticus
BB22OP]
gi|432507158|gb|AGB08675.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Vibrio parahaemolyticus
BB22OP]
Length = 227
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI--SVTA 1755
+ ++A + L + + N++ + RT + A+GL A I DK L S A
Sbjct: 11 QVLKARQTDLTLCLEEVHKPNNVSAVIRTAD---ATGLHKVHA-IWPDKMRTLTHTSAGA 66
Query: 1756 EKWVPIVEVPV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
WV EV NSI+ + K +G VL + ++ + + K T ++LG EK G
Sbjct: 67 RNWV---EVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKIG 123
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 124 ASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|28896932|ref|NP_796537.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|260365880|ref|ZP_05778374.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus K5030]
gi|260877833|ref|ZP_05890188.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AN-5034]
gi|260895518|ref|ZP_05904014.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
Peru-466]
gi|417321028|ref|ZP_12107568.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 10329]
gi|28805140|dbj|BAC58421.1| tRNA methyltransferase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088577|gb|EFO38272.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
Peru-466]
gi|308089712|gb|EFO39407.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AN-5034]
gi|308113480|gb|EFO51020.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus K5030]
gi|328471708|gb|EGF42585.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 10329]
Length = 227
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI--SVTA 1755
+ ++A + L + + N++ + RT + A+GL A I DK L S A
Sbjct: 11 QVLKARQTDLTLCLEEVHKPNNVSAVIRTAD---ATGLHKVHA-IWPDKMRTLTHTSAGA 66
Query: 1756 EKWVPIVEVPV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
WV EV NSI+ + K +G VL + ++ + + K T ++LG EK G
Sbjct: 67 RNWV---EVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKIG 123
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 124 ASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|312130425|ref|YP_003997765.1| tRNA/rRNA methyltransferase (spou) [Leadbetterella byssophila DSM
17132]
gi|311906971|gb|ADQ17412.1| tRNA/rRNA methyltransferase (SpoU) [Leadbetterella byssophila DSM
17132]
Length = 171
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K G+ +L LEQ NS L + + +K L+LG E G+ ++I D IEIPQ G
Sbjct: 89 KQAGYKILALEQADNSTYLQNFRPIKDQKYALILGNEVFGVNEELIAEADEVIEIPQFGT 148
Query: 1835 VRSLNVHVSGAIALWEY 1851
S NV VS + LW+Y
Sbjct: 149 KHSFNVSVSAGMFLWDY 165
>gi|90581394|ref|ZP_01237189.1| putative tRNA methyltransferase [Photobacterium angustum S14]
gi|90437371|gb|EAS62567.1| putative tRNA methyltransferase [Vibrio angustum S14]
Length = 241
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 1688 QVLQAR----SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
QVL R ++ ME + S I R + G+ + V+ G+
Sbjct: 11 QVLATRQPDLTVCMEEVHKPNN-----VSAIIRTADAVGVHKVHAVWPKEGM-------- 57
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
K S A WV + +S+ ++ K +G VL + +I + K
Sbjct: 58 --KVLSHTSAGARNWVELDTH--DSMVEAVQALKDQGMQVLATNLSDTAIDFRDVDYTKP 113
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
T ++LG EK GI + + M D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 114 TAIILGGEKNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|381393448|ref|ZP_09919171.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379331006|dbj|GAB54304.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 233
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K + VL N++ + F K T +VLG+EK G + I M D I IP LG+V+
Sbjct: 92 KSQNMQVLVTHLDQNAVDFRKIDFTKPTAIVLGQEKTGATSEAIAMCDYSIAIPMLGMVQ 151
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
SLNV V+ A+ L+E RQ+
Sbjct: 152 SLNVSVAAALILYEAQRQR 170
>gi|153837870|ref|ZP_01990537.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ3810]
gi|149748733|gb|EDM59578.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus
AQ3810]
Length = 231
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLI--SVTA 1755
+ ++A + L + + N++ + RT + A+GL A I DK L S A
Sbjct: 11 QVLKARQTDLTLCLEEVHKPNNVSAVIRTAD---ATGLHKVHA-IWPDKMRTLTHTSAGA 66
Query: 1756 EKWVPIVEVPV-NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
WV EV NSI+ + K +G VL + ++ + + K T ++LG EK G
Sbjct: 67 RNWV---EVETHNSIETAITELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKIG 123
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D I IP +G+V+SLNV V+ A+ L+E RQ+
Sbjct: 124 ASEQAKKLADQDIIIPMIGMVQSLNVSVASAVILYEAQRQR 164
>gi|304373038|ref|YP_003856247.1| RNA methyltransferase, TrmH family, group 3 [Mycoplasma hyorhinis
HUB-1]
gi|304309229|gb|ADM21709.1| RNA methyltransferase, TrmH family, group 3 [Mycoplasma hyorhinis
HUB-1]
Length = 225
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 1688 QVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
++ + +E+I + +LV I NL + R+ + + N
Sbjct: 63 EIENVKYFPIESIFKDNPKRILVLDHIQDNHNLGAIIRSANAAGIKHIILPKDNCAKIND 122
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+I +++ +V I + VNS+ E+ K F + + + PLDQ +F + + +V
Sbjct: 123 -SVIRISSGGFVGIKFILVNSLLATFEKLKKHNFWIYASSLSKTAKPLDQIVFNQPSAIV 181
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
LG E +GI +++ D IP G V+SLNV V+ I L++
Sbjct: 182 LGSEAKGISKSLLNQSDEIFYIPMQGTVQSLNVSVAAGIILFK 224
>gi|407793544|ref|ZP_11140577.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis 10-D-4]
gi|407214621|gb|EKE84465.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis 10-D-4]
Length = 233
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADAN-ILHDKQFQLISVTA---EKWVPIVEVPVNSIKHFLE 1774
NLA + R+ A + + D + + H K+ ++ TA + WV + + SI L+
Sbjct: 32 NLAAVVRS-----ADAVGVHDVHAVWHCKKSRISGGTALGSQNWVRVHKH--RSIDDALQ 84
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K +G ++ + +++ + + + T ++LG+EK G+ + D + IP LG+
Sbjct: 85 TIKQQGMQIVVTHLSDSAVDFREIDYTRPTAILLGQEKYGVSEQALAAADQQVVIPMLGM 144
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
V+SLNV V+GA+ L+E RQ++
Sbjct: 145 VQSLNVSVAGAVMLYEAQRQRQL 167
>gi|251791702|ref|YP_003006423.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
gi|247540323|gb|ACT08944.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
Length = 230
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K +G +L +A ++ + + T ++LG+EK GI D + + D I IP +G+V+
Sbjct: 87 KMQGMQILATNLSAGAVDFRDVDYTRPTCILLGQEKTGISADALALADQDIIIPMIGMVQ 146
Query: 1837 SLNVHVSGAIALWEYTRQQRF 1857
SLNV V+ A+ L+E RQ++
Sbjct: 147 SLNVSVASALILYEAQRQRQL 167
>gi|220908034|ref|YP_002483345.1| TrmH family RNA methyltransferase [Cyanothece sp. PCC 7425]
gi|219864645|gb|ACL44984.1| RNA methyltransferase, TrmH family, group 3 [Cyanothece sp. PCC 7425]
Length = 387
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E I+ +L A I NL + RT E A GL + Q + + +T+
Sbjct: 210 LENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQGLVV--------PQRRAVGITST 261
Query: 1757 KWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
+ +V +++HF LE+ K GF + G+ TA + P+ F V
Sbjct: 262 ----VAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATA-AKPIYSVEFSGPVV 316
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
LV+G E G+ + D + IP LG SLN V+ +AL+E RQ+
Sbjct: 317 LVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQR 366
>gi|159463572|ref|XP_001690016.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284004|gb|EDP09754.1| predicted protein [Chlamydomonas reinhardtii]
Length = 284
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 1379 KVRAWQMICILSRFVDNDIVGQVTHFLHISLYRNNLPSVRQYLETFAITIYLKFPSLVAE 1438
+VR WQ + +L+ FV + G + + L NN P+V+QY+E + ++ P+L+
Sbjct: 8 QVRLWQSLVVLTSFVPREEGGAAVDAVLLQLNGNNPPTVKQYMEAVVAALVMRDPALLHS 67
Query: 1439 QLVPILRDYDMRPQALSSYVFIAANVIL 1466
+L+P++ Y L S++ IAA L
Sbjct: 68 RLLPLVARYTRHAAGLGSFILIAAQAFL 95
Score = 42.7 bits (99), Expect = 1.8, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 25/28 (89%)
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I + G++RSLNVHV+GAIAL++Y R+Q+
Sbjct: 236 IDKRGIIRSLNVHVTGAIALYDYVRKQQ 263
>gi|15639103|ref|NP_218549.1| rRNA methylase, [Treponema pallidum subsp. pallidum str. Nichols]
gi|189025343|ref|YP_001933115.1| rRNA methylase [Treponema pallidum subsp. pallidum SS14]
gi|378972612|ref|YP_005221216.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. SamoaD]
gi|378973678|ref|YP_005222284.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. Gauthier]
gi|378974741|ref|YP_005223349.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pallidum DAL-1]
gi|378981587|ref|YP_005229892.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. CDC2]
gi|384421661|ref|YP_005631020.1| TrmH family RNA methyltransferase [Treponema pallidum subsp. pallidum
str. Chicago]
gi|408502012|ref|YP_006869456.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pallidum str. Mexico A]
gi|3322373|gb|AAC65100.1| rRNA methylase, putative [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189017918|gb|ACD70536.1| possible rRNA methylase [Treponema pallidum subsp. pallidum SS14]
gi|291059527|gb|ADD72262.1| RNA methyltransferase, TrmH family, group 3 [Treponema pallidum
subsp. pallidum str. Chicago]
gi|374676935|gb|AEZ57228.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. SamoaD]
gi|374678004|gb|AEZ58296.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. CDC2]
gi|374679073|gb|AEZ59364.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pertenue str. Gauthier]
gi|374680139|gb|AEZ60429.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pallidum DAL-1]
gi|408475375|gb|AFU66140.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema pallidum
subsp. pallidum str. Mexico A]
Length = 292
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQ 1749
Q R+L + + VLV I N+ + R+ + F + + + +
Sbjct: 117 QERTL-LHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETIT 175
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+S A WVP+V V ++ K GF + G + +I FP KT LVLG
Sbjct: 176 RVSAGAVAWVPLVRV--RNLVRTAGILKRSGFWLYGADVAGEAI--GARTFPPKTALVLG 231
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E G+ + DA I IP G V SLNV V+ I L+E R Q+
Sbjct: 232 NEGHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQ 278
>gi|399927940|ref|ZP_10785298.1| tRNA/rRNA methyltransferase [Myroides injenensis M09-0166]
Length = 180
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT--VLVLGREKEGIPVDIIHML 1823
V I ++ K + VL +EQ S+ L+ + + T LV G E +G+ +++ +
Sbjct: 83 VKDIVEVVKDLKEKNVVVLSVEQVERSVMLNDFKVEENTHYALVFGNEVKGVSQEVVDLS 142
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
D IEIPQLG SLN+ VS I +W+ +Q
Sbjct: 143 DGVIEIPQLGTKHSLNIAVSAGIVIWDLFQQ 173
>gi|378835813|ref|YP_005205089.1| TrmH family RNA methyltransferase [Mycoplasma hyorhinis GDL-1]
gi|385858259|ref|YP_005904770.1| tRNA/rRNA methyltransferase [Mycoplasma hyorhinis MCLD]
gi|423262818|ref|YP_007012843.1| TrmH family tRNA/rRNA methyltransferase YacO [Mycoplasma hyorhinis
SK76]
gi|330723348|gb|AEC45718.1| tRNA/rRNA methyltransferase [Mycoplasma hyorhinis MCLD]
gi|367460598|gb|AEX14121.1| RNA methyltransferase, TrmH family [Mycoplasma hyorhinis GDL-1]
gi|422035355|gb|AFX74197.1| TrmH family tRNA/rRNA methyltransferase YacO [Mycoplasma hyorhinis
SK76]
Length = 225
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 1688 QVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
++ + +E+I + +LV I NL + R+ + + N
Sbjct: 63 EIENVKYFPIESIFKDNPKRILVLDHIQDNHNLGAIIRSANAAGIKHIILPKDNCAKIND 122
Query: 1748 FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
+I +++ +V I + VNS+ E+ K F + + + PLDQ +F + + +V
Sbjct: 123 -SVIRISSGGFVGIKFILVNSLLATFEKLKKHNFWIYASALSKTAKPLDQIVFNQPSAIV 181
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
LG E +GI +++ D IP G V+SLNV V+ I L++
Sbjct: 182 LGSEAKGISKSLLNQSDEIFYIPMQGTVQSLNVSVAAGIILFK 224
>gi|148377309|ref|YP_001256185.1| tRNA/rRNA methyltransferase [Mycoplasma agalactiae PG2]
gi|148291355|emb|CAL58738.1| tRNA/rRNA methyltransferase [Mycoplasma agalactiae PG2]
Length = 233
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA--IADANILHDKQFQLISVT 1754
++ I+ + VL+ I N + RT A+G+ I + D ++ V+
Sbjct: 75 IDVIKKDNPKTVLILDHIHDPHNFGAIIRTA---NAAGIKHIIIPKDRSTDVTSTVLKVS 131
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
+ +V + + V++I +E+ K GF + N++P ++ + LV+G E++G
Sbjct: 132 SGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNKVQYAGNCALVVGNEEKG 191
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
I +++ D + IPQ G V+S+NV V+ I L+E
Sbjct: 192 ISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFE 227
>gi|338706087|ref|YP_004672855.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
gi|335344148|gb|AEH40064.1| probable rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
Length = 292
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 6/167 (3%)
Query: 1691 QARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQ 1749
Q R+L + + VLV I N+ + R+ + F + + + +
Sbjct: 117 QERTL-LHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETIA 175
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
+S A WVP+V V ++ K GF + G + +I FP KT LVLG
Sbjct: 176 RVSAGAVAWVPLVRV--RNLVRTAGILKRSGFWLYGADVAGEAI--GARTFPPKTALVLG 231
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
E G+ + DA I IP G V SLNV V+ I L+E R Q+
Sbjct: 232 NEGHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQ 278
>gi|110806525|ref|YP_690045.1| methyltransferase [Shigella flexneri 5 str. 8401]
gi|424838917|ref|ZP_18263554.1| putative methyltransferase [Shigella flexneri 5a str. M90T]
gi|110616073|gb|ABF04740.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|383467969|gb|EID62990.1| putative methyltransferase [Shigella flexneri 5a str. M90T]
Length = 345
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 1700 IRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKW 1758
I+A Q VL NL G+ R+C F G+ + DA +L + AE
Sbjct: 191 IQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHV 250
Query: 1759 VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
PI ++I + L+ + G++V+ + PL + P K VLVLG+E EG+P
Sbjct: 251 QPITG---DNIVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 306
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D ++I G V LN+ V+ + L E+ RQ +
Sbjct: 307 ARDPNDLRMKIDGTGNVAGLNISVATGVLLGEWWRQNK 344
>gi|375255583|ref|YP_005014750.1| TrmH family RNA methyltransferase [Tannerella forsythia ATCC 43037]
gi|363408482|gb|AEW22168.1| RNA methyltransferase, TrmH family [Tannerella forsythia ATCC 43037]
Length = 220
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFP--KKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K +G+ + LEQ SI L +K +V+G E +G+ ++ D CIEIPQ G
Sbjct: 134 KQQGYVLCALEQAEGSISLQDLSLDINQKYAIVVGHEVKGVRQAVVDTCDMCIEIPQCGT 193
Query: 1835 VRSLNVHVSGAIALWEYTRQ 1854
SLNV V+ + LWE +Q
Sbjct: 194 KHSLNVSVATGMVLWEIFKQ 213
>gi|357637849|ref|ZP_09135722.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus urinalis
2285-97]
gi|418417939|ref|ZP_12991131.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus urinalis
FB127-CNA-2]
gi|357586303|gb|EHJ55711.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus urinalis
2285-97]
gi|410869469|gb|EKS17430.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus urinalis
FB127-CNA-2]
Length = 252
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 1689 VLQARSLA---METI--RASRQQ--FVLVASLIDRIPNLAGLARTCEVFKASGLAIADAN 1741
VL+ + A +E+I RAS ++ +L+ I N + RT + K SG+ I
Sbjct: 80 VLRVSAFAYSELESIISRASHEENPLILILDGITDPHNFGSILRTADATKVSGIIIPKHR 139
Query: 1742 ILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMF 1800
+ S A ++VPI V ++ L++ K EG+ + G + S ++
Sbjct: 140 AVGVTPVVAKTSTGAVEYVPIARV--TNLSQTLDKLKEEGYWIFGTDMDGTSS--HKWNT 195
Query: 1801 PKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
K VL++G E +GI ++ +D I IP G V+SLN V+ A+ ++E R +
Sbjct: 196 SGKIVLIIGNEGKGISANLKKQVDEMITIPMEGHVQSLNASVAAALLMYEVFRNK 250
>gi|78212346|ref|YP_381125.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9605]
gi|78196805|gb|ABB34570.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9605]
Length = 229
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP--VNSIKH 1771
+++ NL+ + R+C+ A A A + + F + ++KWVP+ + P +I+H
Sbjct: 29 VEKPHNLSAILRSCDAVGALE-AHAVSFDGRPRTFNSTAQGSQKWVPLHDHPDTETAIRH 87
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
K EGF + G ++ + F T VLG EK G+ ++D + IP
Sbjct: 88 L----KGEGFRLYGTHLGVDAKDYRECDFTVPTAFVLGAEKWGLTDQARDLMDEALFIPM 143
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ A L+E RQ++
Sbjct: 144 RGMVQSLNVSVATATLLFEALRQRQ 168
>gi|46200169|ref|YP_005836.1| tRNA (guanosine-2'-O-)-methyltransferase [Thermus thermophilus HB27]
gi|55980096|ref|YP_143393.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
gi|48425869|pdb|1V2X|A Chain A, Trmh
gi|11079208|dbj|BAB17605.1| tRNA (Gm18) methyltransferase [Thermus thermophilus HB8]
gi|46197797|gb|AAS82209.1| tRNA (Guanosine-2'-O-)-methyltransferase [Thermus thermophilus HB27]
gi|55771509|dbj|BAD69950.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
Length = 194
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDK----QFQLISVTAEKWVPI-VEVPVNSIKHFL 1773
NL+ + RTC+ + + +A+ ++ F S + KWV + V ++ FL
Sbjct: 35 NLSAILRTCD-----AVGVLEAHAVNPTGGVPTFNETSGGSHKWVYLRVHPDLHEAFRFL 89
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K GF+V ++ + + K T ++ G EK G+ + + + D I+IP LG
Sbjct: 90 ---KERGFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLG 146
Query: 1834 VVRSLNVHVSGAIALWEYTRQQ 1855
+V+SLNV V+ A+ L+E RQ+
Sbjct: 147 MVQSLNVSVAAAVILFEAQRQR 168
>gi|392407198|ref|YP_006443806.1| rRNA methylase [Anaerobaculum mobile DSM 13181]
gi|390620334|gb|AFM21481.1| rRNA methylase, putative, group 3 [Anaerobaculum mobile DSM 13181]
Length = 253
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVP 1760
+A+ + V++A I NL + R+ EVF A G+ I N + +A +
Sbjct: 95 KANDKALVIIADKIKDPHNLGAIIRSAEVFGALGVIIPKRNSAFPNS-TVHKTSAGASLR 153
Query: 1761 IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
I+ V V+++ + + K +G ++GL+Q A D+ K V+G E+ GI +
Sbjct: 154 IMTVTVSNLVNSINELKEKGVWIVGLDQRAERHLWDKPPIGGKLAFVVGSEEMGISQVVA 213
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
D IP LG SLN V+ +I ++E+ R
Sbjct: 214 KACDDLRSIPMLGKTGSLNAAVAASIGMYEWAR 246
>gi|300782756|ref|YP_003763047.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei U32]
gi|384145976|ref|YP_005528792.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei S699]
gi|399534642|ref|YP_006547304.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei S699]
gi|299792270|gb|ADJ42645.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei U32]
gi|340524130|gb|AEK39335.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei S699]
gi|398315412|gb|AFO74359.1| RNA methyltransferase SpoU [Amycolatopsis mediterranei S699]
Length = 144
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 30/145 (20%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKH------- 1771
NL L RTC+ A ++V WVP N+++
Sbjct: 12 NLGTLLRTCDAVGAC-----------------LAVPRFPWVPEALRRGNTLRRPACVHWV 54
Query: 1772 -----FLERKKHEGFSVLGLEQTANSIPL-DQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
+L R++ G V+G+E ++ L D +T+ VLG E+ GIP +++ +LD+
Sbjct: 55 HDPPDWLARERAAGTRVVGVELAEEAVRLADLPAARGRTIAVLGHEQTGIPPEVLDLLDS 114
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWE 1850
+EIP +G SLNV V+G++ L++
Sbjct: 115 VVEIPMVGTGASLNVAVAGSLVLYK 139
>gi|288801847|ref|ZP_06407289.1| RNA methylase, SpoU family [Prevotella melaninogenica D18]
gi|288335889|gb|EFC74322.1| RNA methylase, SpoU family [Prevotella melaninogenica D18]
Length = 191
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLD----------QYMFPKKT------VLVLGREKEGIP 1816
+E H+G V +EQ S L Q+ P +VLG E +G+
Sbjct: 90 IEELHHQGVFVYSVEQVEGSTKLQELNTENPTNHQHPTPNTQHPVIHYAIVLGNEVKGVK 149
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
++ M D C+EIPQ G SLNV V+ I +WE+ RQ
Sbjct: 150 QSVVDMSDGCLEIPQFGTKHSLNVSVTTGIVIWEFARQ 187
>gi|408675273|ref|YP_006875021.1| RNA methyltransferase, TrmH family, group 3 [Emticicia oligotrophica
DSM 17448]
gi|387856897|gb|AFK04994.1| RNA methyltransferase, TrmH family, group 3 [Emticicia oligotrophica
DSM 17448]
Length = 286
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 1694 SLAMETIRASRQQFVLVASLIDRIPNLAGLARTCE-------VFKASGLAIADANILHDK 1746
++ +T +LV I + N +ART E V A G A +A+ +
Sbjct: 123 NVVADTFEKGETPLLLVLDRITDVRNFGAIARTAECAGVNAIVVPARGAAQVNADAMK-- 180
Query: 1747 QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVL 1806
SV A +P+ NS+ + + G V+ + AN L + F T +
Sbjct: 181 ----TSVGALNHLPVCRE--NSLSQVVSELQQSGIQVVACTEKAND-ELYEIDFTLPTAI 233
Query: 1807 VLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
++G E++GI +++ D +IP +G + SLNV V+ AI L+E RQ++
Sbjct: 234 LMGSEEDGISDNLLEQADFATKIPMMGKIGSLNVSVATAIILYEAVRQRQ 283
>gi|359461745|ref|ZP_09250308.1| RNA methyltransferase [Acaryochloris sp. CCMEE 5410]
Length = 264
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A+ + ++ A I NL + RT E A G+ I + + SV A+
Sbjct: 104 ANPKPVIIAADSITDPHNLGAMIRTAEALGAQGVIIP-----QRRAAGVTSVVAKVATGA 158
Query: 1762 VEV----PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
+E V ++ LE+ K GF + GL +A + F + TVLV+G E G+ V
Sbjct: 159 LETLAIARVVNLNQGLEQLKKAGFWIYGLSTSAPQ-SIHTVTFTEPTVLVIGAEGPGLSV 217
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
H D + IP G SLN V+ +AL+E RQ+
Sbjct: 218 STQHHCDQMVSIPLQGKTASLNASVATGMALYEVYRQR 255
>gi|354616264|ref|ZP_09033924.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora paurometabolica
YIM 90007]
gi|353219380|gb|EHB83959.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora paurometabolica
YIM 90007]
Length = 173
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 1704 RQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIA-------------DANI--LHDKQF 1748
R+ V+VA I N+ L RT E F + + D + L ++
Sbjct: 10 RRSIVVVAHNIRSAHNVGSLLRTGEFFGLDRVWVTGFSPYPTYADDPRDPRLRDLQTRRL 69
Query: 1749 QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
+ AE+ +P + ++ LE + +G++V+GLE ++PL Y P + LVL
Sbjct: 70 AKAAAGAERTMPFDRH--DDVQALLESLRADGYTVVGLELDPTAVPLTDYAPPARVALVL 127
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
G E GI +I D +EI G +LNV V+ IAL
Sbjct: 128 GDEVAGITPEIRDACDRLVEIRSHGRKDTLNVSVAAGIAL 167
>gi|313676389|ref|YP_004054385.1| tRNA/rRNA methyltransferase (spou) [Marivirga tractuosa DSM 4126]
gi|312943087|gb|ADR22277.1| tRNA/rRNA methyltransferase (SpoU) [Marivirga tractuosa DSM 4126]
Length = 181
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPK---KTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K +G+ ++ +EQ NS+ L+++ PK K + G E G+ +++ D C+EIPQ G
Sbjct: 94 KQDGYKIMSVEQAENSLSLEKFA-PKADEKYAFIFGNEVYGVEQEVVDQSDHCLEIPQFG 152
Query: 1834 VVRSLNVHVSGAIALW 1849
SLN+ VS + LW
Sbjct: 153 TKHSLNISVSIGVVLW 168
>gi|242241345|ref|YP_002989526.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
gi|242133402|gb|ACS87704.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
Length = 230
Score = 58.2 bits (139), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
SI + K +G VL +A+++ + + T ++LG+EK GI + + + D I
Sbjct: 78 SIHDAVSHLKSQGMQVLATNLSASAVDFRDVDYTRPTCILLGQEKTGISAEALALADQDI 137
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 138 IIPMIGMVQSLNVSVASALILYEAQRQRQL 167
>gi|410630476|ref|ZP_11341165.1| RNA methyltransferase [Glaciecola arctica BSs20135]
gi|410149918|dbj|GAC18032.1| RNA methyltransferase [Glaciecola arctica BSs20135]
Length = 182
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 1698 ETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEK 1757
E + + ++V + N+ R + F + + + DK+ S K
Sbjct: 21 EYLTQPKMPLIVVLDNVTNSHNIGAFIRLADAFAIEKVIVCGELTISDKKLNKASRNEAK 80
Query: 1758 WVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPV 1817
WV VE +S L+ +G++V +E S+ +P + VLVLG E++G+
Sbjct: 81 WV-CVEYS-DSTTSTLQTLLDDGYTVYSVELCHESVDYSDVTYPSRCVLVLGNERKGVSE 138
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ + I IP G+ SLNV +GAI L Q R
Sbjct: 139 AALKLSQQQIHIPMFGMGNSLNVSTAGAIVLANCANQIR 177
>gi|340000308|ref|YP_004731192.1| RNA methyltransferase [Salmonella bongori NCTC 12419]
gi|339513670|emb|CCC31425.1| putative RNA methyltransferase [Salmonella bongori NCTC 12419]
Length = 345
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWV 1759
+A+ + VL + NL G+ R+C F G+ + DA +L + AE
Sbjct: 192 QAADKDCVLALEDVANPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDI 1819
PI +I L+ + G++V+ + L P+K VLVLGRE + +P
Sbjct: 252 PITG---ENIVDVLDDFRQAGYTVV-TTSSERGQALFSTTLPEKMVLVLGREYDFLPEAA 307
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D C++I G V SLNV V+ + L E+ RQ +
Sbjct: 308 REPGDLCVKINGTGNVESLNVSVATGVLLAEWWRQNK 344
>gi|282877999|ref|ZP_06286807.1| RNA methyltransferase, TrmH family [Prevotella buccalis ATCC 35310]
gi|281299834|gb|EFA92195.1| RNA methyltransferase, TrmH family [Prevotella buccalis ATCC 35310]
Length = 168
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDA 1825
S +E + G+ V +EQ S L + + +V G E +G+ D + D
Sbjct: 77 SATQAVEDLRERGYCVYAIEQVVGSTKLQHLSVDRSQRYAVVFGNEVKGVHQDTVDACDG 136
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
C+EIPQ G SLNV V+ I +WE+ ++
Sbjct: 137 CLEIPQFGTKHSLNVSVTAGIVVWEFAQK 165
>gi|383809303|ref|ZP_09964823.1| RNA methyltransferase, TrmH family [Rothia aeria F0474]
gi|383447655|gb|EID50632.1| RNA methyltransferase, TrmH family [Rothia aeria F0474]
Length = 246
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEV 1729
+QLL +E + + V + R +ME I A R F + N+ + RT
Sbjct: 64 EQLL---REGDRRNVVDKYRYWSMEAIIADLDTRRHDFHVAIENWQHDLNIGTVVRTANA 120
Query: 1730 FKASGLAIADANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
F A + +I+ K++ + ++ +++ + P +I+ F+ + EG ++G++
Sbjct: 121 FLAK-----EVHIIGKKRWNRRGAMVTDRYQHVRHHP--TIEDFVAWAQGEGLDIIGIDI 173
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
+S+PL+ Y PK VLV G+E G+ +I + I Q G RS+N + IA+
Sbjct: 174 FPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQFGSTRSMNAATAAGIAM 233
Query: 1849 WEYTRQQRF 1857
+ R+ F
Sbjct: 234 HAWVRRHVF 242
>gi|300742572|ref|ZP_07072593.1| RNA methyltransferase, TrmH family [Rothia dentocariosa M567]
gi|300381757|gb|EFJ78319.1| RNA methyltransferase, TrmH family [Rothia dentocariosa M567]
Length = 226
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEV 1729
+QLL +E + + V + R +ME I A R F + N+ + RT
Sbjct: 44 EQLL---REGDRRNVVDKYRYWSMEAIIADLDTRRHDFHVAIENWQHDLNIGTVVRTANA 100
Query: 1730 FKASGLAIADANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
F A + +I+ K++ + ++ +++ + P +I+ F+ + EG ++G++
Sbjct: 101 FLAK-----EVHIIGKKRWNRRGAMVTDRYQHVRHHP--TIEDFVAWAQGEGLDIIGIDI 153
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
+S+PL+ Y PK VLV G+E G+ +I + I Q G RS+N + IA+
Sbjct: 154 FPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQFGSTRSMNAATAAGIAM 213
Query: 1849 WEYTRQQRF 1857
+ R+ F
Sbjct: 214 HAWVRRHVF 222
>gi|311112473|ref|YP_003983695.1| TrmH family RNA methyltransferase [Rothia dentocariosa ATCC 17931]
gi|310943967|gb|ADP40261.1| TrmH family RNA methyltransferase [Rothia dentocariosa ATCC 17931]
Length = 246
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 15/189 (7%)
Query: 1674 KQLLEIEKEDELFDQVLQARSLAMETIRAS----RQQFVLVASLIDRIPNLAGLARTCEV 1729
+QLL +E + + V + R +ME I A R F + N+ + RT
Sbjct: 64 EQLL---REGDRRNVVDKYRYWSMEAIIADLDTRRHDFHVAIENWQHDLNIGTVVRTANA 120
Query: 1730 FKASGLAIADANILHDKQF-QLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQ 1788
F A + +I+ K++ + ++ +++ + P +I+ F+ + EG ++G++
Sbjct: 121 FLAK-----EVHIIGKKRWNRRGAMVTDRYQHVRHHP--TIEDFVAWAQGEGLDIIGIDI 173
Query: 1789 TANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIAL 1848
+S+PL+ Y PK VLV G+E G+ +I + I Q G RS+N + IA+
Sbjct: 174 FPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQFGSTRSMNAATAAGIAM 233
Query: 1849 WEYTRQQRF 1857
+ R+ F
Sbjct: 234 HAWVRRHVF 242
>gi|89076058|ref|ZP_01162418.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
gi|89048210|gb|EAR53792.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
Length = 241
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S A WV + +S+ ++ K +G VL + +I + K T ++LG E
Sbjct: 64 SAGARNWVELDTH--DSMVEAVQTLKDQGMQVLATNLSDTAIDFRDVDYTKPTAVILGGE 121
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + M D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 122 KNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|113475949|ref|YP_722010.1| RNA methyltransferase [Trichodesmium erythraeum IMS101]
gi|110166997|gb|ABG51537.1| RNA methyltransferase, TrmH family, group 3 [Trichodesmium erythraeum
IMS101]
Length = 288
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL + + QA+S + + +LVA I+ NL + RT E GL I
Sbjct: 119 ELHELISQAKS-------KTDRSVLLVADGINDPHNLGAIIRTGEALGIQGLVIP----- 166
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + + +T+ + +V ++++F LE K EGF + G +
Sbjct: 167 ---QRRAVGITS----TVTKVAAGALENFPVARVINLNSALEELKKEGFWIYGT-VAKDG 218
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
P+ F VLV+G E EG+ + I DA + IP G SLNV V+ +A++E
Sbjct: 219 EPIHTVKFTGAIVLVVGSEGEGLSLLIQKNCDALVSIPMSGSTPSLNVSVATGMAIYEIH 278
Query: 1853 RQQ 1855
RQ
Sbjct: 279 RQH 281
>gi|406956469|gb|EKD84557.1| RNA methylase [uncultured bacterium]
Length = 155
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 1781 FSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNV 1840
++ +EQ+ S+P D++ + L++G E G+ +++ M DA +EIP GV SLNV
Sbjct: 72 LQIIAIEQSTKSVPYDEFNYTTPVCLIVGNETTGVSKEVLKMADAVVEIPMFGVNISLNV 131
Query: 1841 HVSGAIALWE 1850
VS + L++
Sbjct: 132 MVSLGVVLYK 141
>gi|343082750|ref|YP_004772045.1| TrmH family RNA methyltransferase [Cyclobacterium marinum DSM 745]
gi|342351284|gb|AEL23814.1| RNA methyltransferase, TrmH family, group 3 [Cyclobacterium marinum
DSM 745]
Length = 258
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIAD---ANILHDKQFQLISVTAEKWVPIVE 1763
+L+ + + N +ART EV G+ I + A I D S A ++P+
Sbjct: 110 LILMLDRVTDVRNFGAIARTAEVAGVHGIIIPEKGSAQINSDAVKT--SAGALNFLPVSR 167
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHML 1823
V ++ + L+ K G V+G+ + + + + Q TVLV+G E++G+ +++ +
Sbjct: 168 V--RNLYYTLKDLKKSGLKVVGVTEKTDRM-MYQADLTTPTVLVMGSEEDGVSDELMGLC 224
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D +++P G + SLNV V+ I ++E RQ++
Sbjct: 225 DEFVKVPVHGQIESLNVSVATGIVIYEAIRQRK 257
>gi|434394178|ref|YP_007129125.1| tRNA/rRNA methyltransferase (SpoU) [Gloeocapsa sp. PCC 7428]
gi|428266019|gb|AFZ31965.1| tRNA/rRNA methyltransferase (SpoU) [Gloeocapsa sp. PCC 7428]
Length = 263
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 1687 DQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
D V+ +E I+ L + NL + RT + A+GL ++ AN +
Sbjct: 91 DGVVATAPHCLERIQVPYNGLALALENVQDPGNLGTIIRTAKAAGANGLWLS-ANSVDIY 149
Query: 1747 QFQLISVTAEKW--VPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
+++ TA +W +PI P ++ + + + G V+ + A S+ + + + +
Sbjct: 150 NPKVLRATAGQWFRLPIAISP--DLRATVCKCQQAGMQVIATQADA-SLTYWEVNWQRPS 206
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
+++LG E G+ +++ D C+ IPQ V SLNV ++ A+ L+E RQ+ F
Sbjct: 207 LILLGNEGAGLSAELVAQSDLCVRIPQNAEVESLNVAIAAALMLYEAQRQKMF 259
>gi|390944443|ref|YP_006408204.1| rRNA methylase [Belliella baltica DSM 15883]
gi|390417871|gb|AFL85449.1| rRNA methylase [Belliella baltica DSM 15883]
Length = 232
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 1697 METIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ-FQL---I 1751
ME I A R + F +V I + N + + RT + F I D I+ +Q +++ +
Sbjct: 24 MEEILAKRTRYFTVVLEDIYKPHNASAVLRTADCF-----GIQDVYIIEKEQEYKVNPYV 78
Query: 1752 SVTAEKWVPIVEVP---VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVL 1808
+ A +WV I + N++ + K +GF + A SI + +KT LV
Sbjct: 79 TRGAAQWVDIHKYSNYGGNAVTCCVSDLKKKGFKIYATSPRAESISIHDLNVDEKTALVF 138
Query: 1809 GREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
G E EG+ ++I D + IP G S N+ V+ +I L + R+
Sbjct: 139 GNEHEGVSEEMISQADGLVHIPMDGFTESFNISVAASIFLLDLQRK 184
>gi|441498268|ref|ZP_20980466.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Fulvivirga
imtechensis AK7]
gi|441437895|gb|ELR71241.1| 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB [Fulvivirga
imtechensis AK7]
Length = 247
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 1699 TIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAI---ADANILHDKQFQLISVTA 1755
T + ++ ++ + + N +ART E G+ I A I D S A
Sbjct: 91 TYQQGKEPLFIILDRVTDVRNFGAIARTAECAGIDGVIIPSRGSAAINSDAM--KTSAGA 148
Query: 1756 EKWVPIVEVPVNSIKHFLERKKHEGFSVLG-LEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
++P+ V +++K+ L K G ++ E+T SI + F + ++LG E++G
Sbjct: 149 LNYIPVCRV--DNLKNTLTFLKENGIHIMACTEKTDTSIY--EVNFRQPLAIILGSEEDG 204
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I + + M D+ IP G + SLNV VS AIA++E RQ+
Sbjct: 205 ISPEYLKMCDSRGRIPMSGRIDSLNVSVSAAIAIFEAIRQR 245
>gi|424815321|ref|ZP_18240472.1| putative methyltransferase [Escherichia fergusonii ECD227]
gi|325496341|gb|EGC94200.1| putative methyltransferase [Escherichia fergusonii ECD227]
Length = 370
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 235 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 291
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P+K VLVLG+E EG+P D ++I G V
Sbjct: 292 QAGYTVV-TTSSEQGKPLFKTSLPEKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 350
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 351 LNISVATGVLLGEWWRQNK 369
>gi|218547893|ref|YP_002381684.1| methyltransferase [Escherichia fergusonii ATCC 35469]
gi|416898777|ref|ZP_11928323.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_7v]
gi|417114868|ref|ZP_11966004.1| RNA methyltransferase, TrmH family [Escherichia coli 1.2741]
gi|422780515|ref|ZP_16833300.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|422799897|ref|ZP_16848396.1| SpoU rRNA methylase [Escherichia coli M863]
gi|218355434|emb|CAQ88042.1| putative methyltransferase [Escherichia fergusonii ATCC 35469]
gi|323967625|gb|EGB63038.1| SpoU rRNA methylase [Escherichia coli M863]
gi|323978389|gb|EGB73474.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|327252291|gb|EGE63963.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_7v]
gi|386140287|gb|EIG81439.1| RNA methyltransferase, TrmH family [Escherichia coli 1.2741]
Length = 345
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P+K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPEKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|386361244|ref|YP_006059489.1| rRNA methylase [Thermus thermophilus JL-18]
gi|383510271|gb|AFH39703.1| rRNA methylase [Thermus thermophilus JL-18]
Length = 194
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDK----QFQLISVTAEKWVPI-VEVPVNSIKHFL 1773
NL+ + RTC+ + + +A+ ++ F S + KWV + V ++ FL
Sbjct: 35 NLSAILRTCD-----AVGVLEAHAVNPTGGVPTFNETSGGSHKWVYLRVHPDIHEAFRFL 89
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
K GF+V ++ + + K T ++LG EK G+ + + + D I+IP LG
Sbjct: 90 ---KERGFTVYATALREDARDFREVDYTKPTCVLLGAEKWGVSEEALALSDGAIKIPMLG 146
Query: 1834 VVRSLNVHVSGAIALWEYTRQQ 1855
+V+SLNV V+ A+ L+E RQ+
Sbjct: 147 MVQSLNVSVAAAVILFEAQRQR 168
>gi|90412684|ref|ZP_01220685.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
gi|90326259|gb|EAS42678.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
Length = 234
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 1752 SVTAEKWVPI--VEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
S A WV + + V++I H K +G VL + +I + K T ++ G
Sbjct: 64 SAGARNWVELDTHDNMVDAITHL----KAQGMQVLATNLSDTAIDFRDVDYTKPTAIIFG 119
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
EK GI + + M D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 120 GEKNGITAEALAMADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQ 166
>gi|170076759|ref|YP_001733397.1| RNA methyltransferase [Synechococcus sp. PCC 7002]
gi|169884428|gb|ACA98141.1| RNA methyltransferase, TrmH family [Synechococcus sp. PCC 7002]
Length = 219
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 1719 NLAGLARTCEVFKASGL----AIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLE 1774
N++ + RTC+ + +AD ++L + ++ +EKWV + P ++ ++
Sbjct: 32 NISAIIRTCDAVGVMAVHAMNQVADGDVL--DTYSQVAQGSEKWVDLNRHPDVTVA--ID 87
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ + F + + ++ + + T +++G E+ G+ ++D I IP LG+
Sbjct: 88 QLHQQNFKIYAAHLSDRAVDYRTIDYTQPTAILMGAERWGVSDTAAELVDGHIIIPMLGM 147
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLNV V+ A+ L+E RQ+
Sbjct: 148 VQSLNVSVAAAVILFEAQRQR 168
>gi|421488440|ref|ZP_15935828.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus oralis
SK304]
gi|400367657|gb|EJP20672.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus oralis
SK304]
Length = 242
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VP---VNSIKHFLE 1774
NL + RT + SG+ I + + V A+ +E VP V ++ LE
Sbjct: 108 NLGSILRTADATNVSGVIIPK-----HRAVGVTPVVAKTATGAIEHVPIARVTNLSQTLE 162
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ K EGF G + N P ++ K L++G E +GI +I +D I IP G
Sbjct: 163 KLKDEGFWTFGTDM--NGTPCHKWNTKGKIALIIGNEGKGISSNIKKQVDEMITIPMNGH 220
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ AI ++E R +
Sbjct: 221 VQSLNASVAAAILMYEVFRNR 241
>gi|260435545|ref|ZP_05789515.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8109]
gi|260413419|gb|EEX06715.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8109]
Length = 210
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVP--VNSIKH 1771
+++ NL+ + R+C+ A N + F + ++KWVP+ + P +I+H
Sbjct: 29 VEKPHNLSAILRSCDAVGALEAHAVSFNG-RPRTFNSTAQGSQKWVPLHDHPDTETAIRH 87
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQ 1831
K +GF + G ++ + F T VLG EK G+ ++D + IP
Sbjct: 88 L----KAKGFRLYGTHLGVDAKDYRECDFTGPTAFVLGAEKWGLTDQAQDLMDEALFIPM 143
Query: 1832 LGVVRSLNVHVSGAIALWEYTRQQR 1856
G+V+SLNV V+ A L+E RQ++
Sbjct: 144 RGMVQSLNVSVATATLLFEALRQRQ 168
>gi|372277206|ref|ZP_09513242.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. SL1_M5]
gi|390437320|ref|ZP_10225858.1| tRNA guanosine-2'-O-methyltransferase [Pantoea agglomerans IG1]
Length = 232
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S + WV +V P +I +++ K + VL +A+++ + + T +++G+E
Sbjct: 64 SAGSNSWVKVVTHP--TIGDAVKKLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQE 121
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 122 KTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQRQ 166
>gi|120434617|ref|YP_860307.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
gi|117576767|emb|CAL65236.1| TrmH family tRNA/rRNA methyltransferase [Gramella forsetii KT0803]
Length = 178
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 1772 FLERKKHEGFSVLGLEQTANSIPLDQYMFPKK---TVLVLGREKEGIPVDIIHMLDACIE 1828
+++ K EG V +EQ + L+ ++ P+K T +V G E +G+ +++ DA IE
Sbjct: 91 LVKKLKAEGIKVYAIEQAEGATMLNDFV-PEKHQTTAVVFGNEVKGVQQEVVSASDAVIE 149
Query: 1829 IPQLGVVRSLNVHVSGAIALWE 1850
IPQLG SLN+ VS + LW+
Sbjct: 150 IPQLGSKHSLNISVSTGVVLWD 171
>gi|319951639|ref|YP_004162906.1| tRNA/rRNA methyltransferase (spou) [Cellulophaga algicola DSM 14237]
gi|319420299|gb|ADV47408.1| tRNA/rRNA methyltransferase (SpoU) [Cellulophaga algicola DSM 14237]
Length = 235
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 1680 EKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIAD 1739
E+ + F QVL R+ + + + ++ N + + R+C++F I +
Sbjct: 35 EERKQRFIQVLAERT----------NKITVAVEDVFQMHNTSAVVRSCDIF-----GIQE 79
Query: 1740 ANILH----DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPL 1795
A+++ D+ I++ ++KWV I S K+ ++ K G+ ++ +S L
Sbjct: 80 AHLIERKYGDQLDSQIAMGSQKWVDIHRYE--STKNCMDTLKQNGYKIIATTPHNDSCLL 137
Query: 1796 DQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
+ + K L G E+ G+ +++ D ++IP +G SLN+ VS AI L T
Sbjct: 138 EDFEIEGKIALFFGTERNGLSEEVLKNADGFLKIPMVGFTESLNISVSAAIILQSLT 194
>gi|399029164|ref|ZP_10730185.1| rRNA methylase [Flavobacterium sp. CF136]
gi|398072953|gb|EJL64142.1| rRNA methylase [Flavobacterium sp. CF136]
Length = 178
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
++ + +LV I + N+ + RT + F + + +K+ ++ A + V
Sbjct: 19 KSEKTPLILVLDDIRSLHNIGSVFRTADAFLVEKIILCGITATPPNKEIHKTALGATETV 78
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPV 1817
I E N ++ +E K E L +EQ +++ L + K K LV G E G+
Sbjct: 79 -IWEHHENVLE-VIENLKKENILTLAIEQVESAVFLQDFKVEKNQKYALVFGNEVYGVSQ 136
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+ + + D CIEIPQLG SLN+ VS I +W+ ++
Sbjct: 137 EAVAICDGCIEIPQLGTKHSLNISVSAGIVVWDLFKK 173
>gi|410027870|ref|ZP_11277706.1| rRNA methylase [Marinilabilia sp. AK2]
Length = 257
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 16/157 (10%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGLAIAD---ANILHDKQFQLISVTAEKWVPIVE 1763
+LV + + N +ART E + I + A I D S A +PI
Sbjct: 110 LILVLDRVTDVRNFGAIARTAECAGVHAIVIPEKGSAQINSDAV--KTSAGALNHLPIAR 167
Query: 1764 VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYM----FPKKTVLVLGREKEGIPVDI 1819
V +N + KK +GL+ A + DQ M F T L++G E++GI ++
Sbjct: 168 V-INLYYTVKDLKK------MGLQVVAVTEKTDQLMYEADFTLPTALIMGSEEDGISDEL 220
Query: 1820 IHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ DA ++IP +G + SLNV VS A+ ++E RQ++
Sbjct: 221 MGQSDASVKIPLMGNIESLNVSVSAAVVIYEAIRQRQ 257
>gi|384440253|ref|YP_005654977.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
gi|359291386|gb|AEV16903.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
Length = 191
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 1691 QARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK--- 1746
+AR +E + RQ ++ + + NL+ + R+C+ + + +A+ ++
Sbjct: 3 EARRKRIEDVLKRRQPDLTVLLENVHKPHNLSAILRSCD-----AVGVLEAHAVNPTGGV 57
Query: 1747 -QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
F S + KWV + P I + GF V + + + + + T
Sbjct: 58 PTFNETSGGSHKWVYLRVHP--DIAEAFRFLRERGFRVYATALSREAQDYREVDYTQPTA 115
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++LG EK G+ + + + D I+IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 116 ILLGAEKWGVSPEALALADGAIQIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|379706704|ref|YP_005261909.1| putative TRNA/RRNA METHYLTRANSFERASE [Nocardia cyriacigeorgica GUH-2]
gi|374844203|emb|CCF61265.1| putative TRNA/RRNA METHYLTRANSFERASE [Nocardia cyriacigeorgica GUH-2]
Length = 323
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 1698 ETIRASRQQFVLVASLIDRIP---NLAGLARTCEVFKASGLAIADANILHDKQFQLISVT 1754
E +R S Q ++VA +D I NL + R+ F G+ I Q + SVT
Sbjct: 165 ERVRDSGQPALIVA--LDNISDPRNLGAVIRSVAAFGGQGVVIP--------QRRSASVT 214
Query: 1755 AEKWV----PIVEVPV---NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLV 1807
A W +PV ++ L+ +G+ ++GL+ ++ LD++ TV+V
Sbjct: 215 AVAWRTSAGAAARLPVARATNLTRTLKDFAAKGYQIVGLDAGGDTT-LDEFDGTAPTVIV 273
Query: 1808 LGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+G E +G+ + DA + IP G V SLN V+ + L E RQ+R
Sbjct: 274 VGSEGKGLSRLVRETCDAILSIPMAGPVESLNASVAAGVVLAEVARQRR 322
>gi|197286694|ref|YP_002152566.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis HI4320]
gi|227355114|ref|ZP_03839525.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|425069568|ref|ZP_18472683.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|425071027|ref|ZP_18474133.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
gi|194684181|emb|CAR45642.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis HI4320]
gi|227164901|gb|EEI49748.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|404596994|gb|EKA97501.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|404599852|gb|EKB00305.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
Length = 239
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTA--EKWVPIVEVPVNSIKHFLERK 1776
N+A + RT + A G+ A +K L+S A WV + P +I +
Sbjct: 32 NVAAVIRTAD---AVGIPKIHAIWPEEKMRMLVSPAAGSNSWVNVNTHP--TIADAINTF 86
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
+ +G VL + ++ + + + T +++G+EK GI + I + D I +P +G+V+
Sbjct: 87 RAQGMQVLATHLSDKAVDFREIDYTQPTCIIMGQEKTGISPEAIALADQDIIVPMMGMVQ 146
Query: 1837 SLNVHVSGAIALWEYTRQQR 1856
SLNV V+ A+ L+E RQ++
Sbjct: 147 SLNVSVASALILYEAQRQRQ 166
>gi|418962962|ref|ZP_13514810.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus anginosus
subsp. whileyi CCUG 39159]
gi|383344731|gb|EID22886.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus anginosus
subsp. whileyi CCUG 39159]
Length = 242
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + +G+ I + S A + +PIV V ++ L++ K
Sbjct: 108 NLGSILRTADATNVTGVIIPKHRAVGVTPVVAKTSTGAVEHIPIVRV--TNLSQALDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
H GF + G + N P ++ K L++G E +GI +I +D + IP G V+S
Sbjct: 166 HAGFWIFGTDM--NGTPSTKWNTAGKLALIIGNEGKGISANIKKQVDEMLTIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|197119261|ref|YP_002139688.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
bemidjiensis Bem]
gi|197088621|gb|ACH39892.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
bemidjiensis Bem]
Length = 248
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAE 1756
+E ++ +R +LV + NL L R+ + A A+A ++ + ++ AE
Sbjct: 87 LEGLQGTRDGLILVLDSVQDPHNLGALIRS------AACAGANAVVIPKDRAAGVTAVAE 140
Query: 1757 KWVP-----IVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
K I V +I LE K GF + G + +A L Q F LV+G E
Sbjct: 141 KSSAGATETISVAQVTNISQALESLKKAGFWIYGADGSARHT-LYQQDFTGPVALVIGGE 199
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
EGI + DA + IP G V SLN V+G I L+E RQ+
Sbjct: 200 GEGIRPLVRKGCDAVVSIPLQGGVNSLNASVAGGIFLFEVVRQR 243
>gi|408418127|ref|YP_006759541.1| tRNA/rRNA methyltransferase SpoU [Desulfobacula toluolica Tol2]
gi|405105340|emb|CCK78837.1| SpoU: tRNA/rRNA methyltransferase [Desulfobacula toluolica Tol2]
Length = 265
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
N+ + RTCE + + + + + ++ A +W+ + V + L KK
Sbjct: 130 NVGSIFRTCEAAGFNSVILGNTPGKEHPGVRKTAMGAHEWIE--QEKVEDLAQALIEKKA 187
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
+GF ++G+E A + P + + KKT++V G E+ GI ++ DA IP G S+
Sbjct: 188 KGFQIIGVETIAGARPFHEVSWEKKTIVVFGNEEYGISSHVMAACDAFAYIPMFGKKNSI 247
Query: 1839 NV 1840
NV
Sbjct: 248 NV 249
>gi|417222870|ref|ZP_12026310.1| RNA methyltransferase, TrmH family [Escherichia coli 96.154]
gi|417603242|ref|ZP_12253812.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_94C]
gi|345350908|gb|EGW83183.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_94C]
gi|386202672|gb|EII01663.1| RNA methyltransferase, TrmH family [Escherichia coli 96.154]
Length = 345
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDSNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|33866213|ref|NP_897772.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH 8102]
gi|33639188|emb|CAE08196.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp.
WH 8102]
Length = 229
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 1714 IDRIPNLAGLARTCEVFKASGLAIADANIL----HDKQFQLISVTAEKWVPIVEVPVNSI 1769
+++ NL+ + R+C+ A +A+I+ + F + ++KWVP+ + P +I
Sbjct: 29 VEKPHNLSAILRSCDAVGA-----LEAHIVSLQGRTRTFNSTAQGSQKWVPLNDHP--TI 81
Query: 1770 KHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEI 1829
+ + K GF V G + F T VLG EK G+ ++D + I
Sbjct: 82 ETAIGSLKDRGFRVYGTHLGVEAKDYRDCDFTGPTAFVLGAEKWGLTDRARDLMDEALFI 141
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQR 1856
P G+V+SLNV V+ A L+E RQ++
Sbjct: 142 PMRGMVQSLNVSVATATLLFEALRQRQ 168
>gi|82545036|ref|YP_408983.1| methyltransferase [Shigella boydii Sb227]
gi|416295000|ref|ZP_11651051.1| putative methyltransferase [Shigella flexneri CDC 796-83]
gi|417683228|ref|ZP_12332577.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 3594-74]
gi|420354004|ref|ZP_14855104.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 4444-74]
gi|81246447|gb|ABB67155.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|320186384|gb|EFW61118.1| putative methyltransferase [Shigella flexneri CDC 796-83]
gi|332092607|gb|EGI97679.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 3594-74]
gi|391277337|gb|EIQ36087.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 4444-74]
Length = 345
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L TAE +V+ + ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGA---AIRTAEGGAELVQSITGDNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|420326775|ref|ZP_14828524.1| spoU rRNA Methylase family protein [Shigella flexneri CCH060]
gi|391249522|gb|EIQ08753.1| spoU rRNA Methylase family protein [Shigella flexneri CCH060]
Length = 199
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L TAE +V+ + ++I + L+ +
Sbjct: 64 NLGGMMRSCAHFGVKGVVVQDAALLESGA---AIRTAEGGAELVQSITGDNIVNVLDDFR 120
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 121 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 179
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 180 LNISVATGVLLGEWWRQNK 198
>gi|419914807|ref|ZP_14433193.1| putative methyltransferase [Escherichia coli KD1]
gi|388385583|gb|EIL47261.1| putative methyltransferase [Escherichia coli KD1]
Length = 345
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNMLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|427709000|ref|YP_007051377.1| TrmH family RNA methyltransferase [Nostoc sp. PCC 7107]
gi|427361505|gb|AFY44227.1| RNA methyltransferase, TrmH family, group 3 [Nostoc sp. PCC 7107]
Length = 327
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 31/183 (16%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + +A+S+A + + ++VA I NL + RT E A GL I
Sbjct: 151 ELPDLIAKAKSVANDPV-------IVVAEGITDPHNLGAIIRTAEAIGAQGLVIP----- 198
Query: 1744 HDKQFQLISVTAEKWVPIVEVPVNSIKHF-----------LERKKHEGFSVLGLEQTANS 1792
Q + + +T+ +V+V +++ F LE K GF + G T S
Sbjct: 199 ---QRRAVGITST----VVKVAAGALEKFAVARVVNLGRALEELKEAGFWIYGTAATG-S 250
Query: 1793 IPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYT 1852
P+ F VLV+G E EG+ + D + I G SLN V+ +AL+E
Sbjct: 251 EPIHTVRFTGPVVLVIGSEGEGLNMLTQRACDVLVSISLQGKTPSLNASVAAGMALYEVY 310
Query: 1853 RQQ 1855
RQ+
Sbjct: 311 RQR 313
>gi|376298146|ref|YP_005169376.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
ND132]
gi|323460708|gb|EGB16573.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
ND132]
Length = 196
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 1688 QVLQARSLAMETIRASRQQ-FVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK 1746
Q+ +AR ++ + A RQ+ LV I N++ + R+C+ F +G+ + D
Sbjct: 4 QITEARKRRIDAVLARRQKDLTLVMDNIWDPHNVSAVLRSCDAFGVAGVHL----YYTDS 59
Query: 1747 QFQLISV----TAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
Q+ +++ +A KWV E V++ + E K G VL + ++ P+ + F K
Sbjct: 60 QWPDLALKSSGSATKWVERTE-HVDAAEMVAELKGR-GMRVLRTGFSDSARPVMDFDFTK 117
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
T ++L E G D+ ++ I IP G+V+S NV V+ AI L++ Q+
Sbjct: 118 PTAIILSNEHRGTSPDLAALVPDEIYIPMQGMVQSFNVSVAAAIILYQAFTQR 170
>gi|339320568|ref|YP_004683090.1| tRNA/rRNA methyltransferase [Mycoplasma bovis Hubei-1]
gi|392429635|ref|YP_006470680.1| RNA methyltransferase [Mycoplasma bovis HB0801]
gi|338226693|gb|AEI89755.1| tRNA/rRNA methyltransferase [Mycoplasma bovis Hubei-1]
gi|392051044|gb|AFM51419.1| RNA methyltransferase [Mycoplasma bovis HB0801]
Length = 233
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 1697 METIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS---- 1752
++ I+ + VL+ I N + RT A+ I I D+ ++ S
Sbjct: 75 IDIIKKDNPKTVLILDHIQDPHNFGAILRT-----ANAAGIKHIIIPKDRSAEVTSTVLK 129
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
V++ +V + + V++I + + K GF + N++P ++ + + LV+G E+
Sbjct: 130 VSSGGFVGVKTIKVSNIVASINKLKSWGFWIYSSLLDQNAVPYNKVEYNEHCALVVGNEE 189
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWE 1850
+GI II+ D + IPQ G V+S+NV V+ I L+E
Sbjct: 190 KGISKPIINATDVKVYIPQFGTVQSMNVSVATGILLFE 227
>gi|302804009|ref|XP_002983757.1| hypothetical protein SELMODRAFT_119049 [Selaginella moellendorffii]
gi|300148594|gb|EFJ15253.1| hypothetical protein SELMODRAFT_119049 [Selaginella moellendorffii]
Length = 264
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 1686 FDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGL-AIADANILH 1744
FDQ++ R+ ++ + V L D I N+ + RT E F + IA+++
Sbjct: 61 FDQIIANRTFSICPV---------VEGLFD-IGNICAVFRTAEAFGLQSVHVIANSDQKR 110
Query: 1745 DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKT 1804
K+ + IS+ AEKW+ VEV N+ ++ + G+ + + A+++P+ + + T
Sbjct: 111 YKEARNISMGAEKWLD-VEVWENT-NECVQVLRSRGYRIAVTDMGADTVPIHELDWTIPT 168
Query: 1805 VLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALW 1849
++ G E G + + + D IP +G+V S NV V+ I ++
Sbjct: 169 AVIFGNEHNGTSEEALALADVKCHIPMVGMVESFNVSVAAGILMY 213
>gi|421489677|ref|ZP_15937053.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus anginosus
SK1138]
gi|400374265|gb|EJP27184.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus anginosus
SK1138]
Length = 242
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + +G+ I + S A + VPI V ++ L++ K
Sbjct: 108 NLGSILRTADATNVTGVIIPKHRAVGVTPVVAKTSTGAVEHVPIARV--TNLSQALDKLK 165
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
H GF + G + N P ++ K L++G E +GI +I +D I IP G V+S
Sbjct: 166 HAGFWIFGTDM--NGTPSTKWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMNGHVQS 223
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 224 LNASVAAAILMYEVFRNR 241
>gi|320449724|ref|YP_004201820.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
gi|320149893|gb|ADW21271.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
Length = 191
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 1691 QARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK--- 1746
+AR +E + RQ ++ + + NL+ + RTC+ + I +A+ ++
Sbjct: 3 EARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCD-----AVGILEAHAVNPTGGV 57
Query: 1747 -QFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV 1805
F S + KWV + P SI+ + K +GF V ++ + + + T
Sbjct: 58 PTFNETSGGSHKWVYLRVHP--SIQEAISFLKEKGFRVYATALREDARDFREVDYTQPTA 115
Query: 1806 LVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
++LG EK G+ + + + I+IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 116 ILLGAEKWGVSEETLALSHGAIKIPMLGMVQSLNVSVAAAVILFEAQRQR 165
>gi|149908558|ref|ZP_01897220.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
gi|149808392|gb|EDM68329.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
Length = 228
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKH 1778
NLA + RTC+ + + A +I K + ++ WV + ++I ++ K
Sbjct: 32 NLAAVVRTCDAVGVNNVH-AVWSIRPTKVSGGTATGSQNWVKVHSH--DNIAAAIKELKA 88
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSL 1838
+G VL + ++ + K T +++G+EK GI + + + D I IP +G+V+SL
Sbjct: 89 QGMQVLATNLSDTAVDFRDIDYTKPTAILMGQEKTGISAEALALADQDIIIPMVGMVQSL 148
Query: 1839 NVHVSGAIALWEYTRQQ 1855
NV V+ A L+E RQ+
Sbjct: 149 NVSVATATILYEAQRQR 165
>gi|409098155|ref|ZP_11218179.1| tRNA/rRNA methyltransferase SpoU [Pedobacter agri PB92]
Length = 176
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFP---KKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
+ G+ ++ +EQ NS L+ + P KK L+ G E +G+ +++ +D C+EIPQ G
Sbjct: 94 RQAGYEIIAIEQAENSTMLNTFK-PDPSKKYALIFGNEVDGVSDEVMLKIDECVEIPQFG 152
Query: 1834 VVRSLNVHVSGAIALWEYTRQQRF 1857
S N+ +S I W++ + R
Sbjct: 153 TKHSFNIVISAGIVFWDFFAKLRL 176
>gi|50915006|ref|YP_060978.1| 23S rRNA Gm2251 methyltransferase [Streptococcus pyogenes MGAS10394]
gi|50904080|gb|AAT87795.1| 23S rRNA Gm2251 methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 257
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + G+ I ++ S A + +PI V ++ L++ K
Sbjct: 123 NLGSILRTADATNVCGVIIPKHRSVGVTPVVSKTSTGAVEHIPIARV--TNLSQILDKLK 180
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
GF + G + N P D + K LV+G E +GI +I +D I IP G V+S
Sbjct: 181 ARGFWIFGTDM--NGTPSDCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQS 238
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN V+ AI ++E R +R
Sbjct: 239 LNASVAAAILMYEVFRNRR 257
>gi|336397846|ref|ZP_08578646.1| tRNA/rRNA methyltransferase (SpoU) [Prevotella multisaccharivorax DSM
17128]
gi|336067582|gb|EGN56216.1| tRNA/rRNA methyltransferase (SpoU) [Prevotella multisaccharivorax DSM
17128]
Length = 175
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 1779 EGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
EG V +EQ S L Q ++LG E +G+ ++ M D C+EIPQ G
Sbjct: 96 EGRFVWSVEQVEGSTKLQQLKLSPDVSAAVILGNEVKGVQQSVVDMSDGCLEIPQFGTKH 155
Query: 1837 SLNVHVSGAIALWEYTRQ 1854
SLNV + I +WE+ R+
Sbjct: 156 SLNVSTTAGIVIWEFARR 173
>gi|150024500|ref|YP_001295326.1| tRNA/rRNA methyltransferase [Flavobacterium psychrophilum JIP02/86]
gi|149771041|emb|CAL42508.1| Probable tRNA/rRNA methyltransferase [Flavobacterium psychrophilum
JIP02/86]
Length = 182
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMF--PKKTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K + SV +EQ N+I L+ + KK L+ G E G+ + I + D IEIP
Sbjct: 90 IENLKKDEISVFAIEQVENAIFLNDFKVEATKKYALIFGNEVFGVNQEAIRLCDGTIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWE 1850
QLG SLN+ VS I +W+
Sbjct: 150 QLGTKHSLNISVSTGIVVWD 169
>gi|194333759|ref|YP_002015619.1| tRNA guanosine-2'-O-methyltransferase [Prosthecochloris aestuarii DSM
271]
gi|194311577|gb|ACF45972.1| tRNA guanosine-2'-O-methyltransferase [Prosthecochloris aestuarii DSM
271]
Length = 216
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 1707 FVLVASLIDRIPNLAGLARTCEVFKASGL-AIADANILHDKQFQLISVTAEKWVPIVEVP 1765
+V +++ NLA + RTC+ + A+++ + KQ T +WV +
Sbjct: 21 LTVVMDNVNKPHNLAAIIRTCDSVGIETIHAVSNRPSIRKKQKTAGGST--RWVQLSLH- 77
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDA 1825
S+++ K G +L ++ S+ + + T +V+G EK G D I ++D
Sbjct: 78 -ESMENLANTLKSNGTRLLAAHYSSTSVDFRSIDYTRPTAIVMGAEKLGPSSDTISLVDQ 136
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
I IP G+ SLNV V+ A+ L+E RQ+
Sbjct: 137 AIHIPMQGMAESLNVSVAAAVILFEAQRQR 166
>gi|134300171|ref|YP_001113667.1| RNA methyltransferase [Desulfotomaculum reducens MI-1]
gi|134052871|gb|ABO50842.1| RNA methyltransferase, TrmH family, group 2 [Desulfotomaculum
reducens MI-1]
Length = 152
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 1717 IP-NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLER 1775
IP N +ARTC V AS + D ++ L + W H L+
Sbjct: 10 IPANTGNIARTCSVTGASLHLVEPLGFSTDDRY-LKRAGLDYW------------HLLDL 56
Query: 1776 KKHEGFSVLGLE---------QTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHM-LDA 1825
H+ F+ L + T P + F + LV G+E G+P +++ D
Sbjct: 57 HYHKSFAALQQQYPEGRFWYFTTKGGRPYHEASFEENDFLVFGKETAGLPKELLAANPDN 116
Query: 1826 CIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
C+ IP LG VRSLN+ S AIA++E RQ F
Sbjct: 117 CLRIPMLGQVRSLNLSNSVAIAVYEALRQHNF 148
>gi|429752949|ref|ZP_19285780.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429175416|gb|EKY16860.1| RNA methyltransferase, TrmH family [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 180
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 1701 RASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWV 1759
+A + +++ + + N+ + RTC+ F + + +K+ ++ A V
Sbjct: 19 KAEKTPLIVILDNVRSLNNIGSVFRTCDAFLIEKIYLCGITATPPNKEIHKTALGATDSV 78
Query: 1760 PIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPV 1817
E N++ +E+ K +G ++ +EQ NS L+ + +K ++ G E +G+
Sbjct: 79 AW-EYEENTLSA-VEKLKEQGAYIISIEQAENSTMLNDFEPNRNQKYAIIFGNEVKGVEQ 136
Query: 1818 DIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+++ D IEIPQ G SLN+ VS I +WE + R
Sbjct: 137 EVVSASDEVIEIPQYGTKHSLNISVSAGIVIWELAMKIR 175
>gi|21911205|ref|NP_665473.1| SpoU family tRNA/rRNA methyltransferase [Streptococcus pyogenes
MGAS315]
gi|28896582|ref|NP_802932.1| tRNA/rRNA methyltransferase [Streptococcus pyogenes SSI-1]
gi|21905417|gb|AAM80276.1| putative tRNA/rRNA methyltransferase, spoU family [Streptococcus
pyogenes MGAS315]
gi|28811836|dbj|BAC64765.1| putative tRNA/rRNA methyltransferase [Streptococcus pyogenes SSI-1]
Length = 248
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIAD-ANILHDKQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + G+ I ++ S A + +PI V ++ L++ K
Sbjct: 114 NLGSILRTADATNVCGVIIPKHRSVCVTPVVSKTSTGAVEHIPIARV--TNLSQTLDKLK 171
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
GF + G + N P D + K LV+G E +GI +I +D I IP G V+S
Sbjct: 172 ARGFWIFGTDM--NGTPSDCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQS 229
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN V+ AI ++E R +R
Sbjct: 230 LNASVAAAILMYEVFRNRR 248
>gi|293415850|ref|ZP_06658493.1| methyltransferase [Escherichia coli B185]
gi|291433498|gb|EFF06477.1| methyltransferase [Escherichia coli B185]
Length = 345
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFDVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLSEWWRQNK 344
>gi|227494335|ref|ZP_03924651.1| tRNA/rRNA methyltransferase [Actinomyces coleocanis DSM 15436]
gi|226832069|gb|EEH64452.1| tRNA/rRNA methyltransferase [Actinomyces coleocanis DSM 15436]
Length = 210
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 1769 IKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIE 1828
++ F + G ++G++ S+PL++ + P V+V+G E G+ ++ + + +
Sbjct: 122 VESFQAAMQEAGMRIVGVDNIERSVPLEETVLPLNCVMVMGEESTGLSPEMAAISEEIVH 181
Query: 1829 IPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
I Q G RS+NV + AI++W + Q R
Sbjct: 182 ITQYGSTRSMNVGHAAAISMWAWVLQHR 209
>gi|298207614|ref|YP_003715793.1| SpoU rRNA methylase family protein [Croceibacter atlanticus HTCC2559]
gi|83850250|gb|EAP88118.1| putative SpoU rRNA methylase family protein [Croceibacter atlanticus
HTCC2559]
Length = 178
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1766 VNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTV--LVLGREKEGIPVDIIHML 1823
VN +ER K + +L +EQ ++I L+ + T +V G E +G+ D++
Sbjct: 85 VNDTVALVERLKEDHVKILAIEQAEDAIMLNTFKPEPNTTYAVVFGNEVKGVQQDVVSQS 144
Query: 1824 DACIEIPQLGVVRSLNVHVSGAIALWE 1850
DA IEIPQ G SLN+ VS + +W+
Sbjct: 145 DAVIEIPQFGSKHSLNISVSVGVVMWD 171
>gi|395803476|ref|ZP_10482722.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
gi|395434288|gb|EJG00236.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium sp. F52]
Length = 178
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1773 LERKKHEGFSVLGLEQTANSIPLDQYMFPK--KTVLVLGREKEGIPVDIIHMLDACIEIP 1830
+E K E + +EQ +S+ L + K K LV G E G+ + + + D CIEIP
Sbjct: 90 IENLKKENVLTMAIEQVESSVFLQDFKIEKNQKYALVFGNEVYGVSQEAVAICDGCIEIP 149
Query: 1831 QLGVVRSLNVHVSGAIALWE 1850
QLG SLN+ VS I +W+
Sbjct: 150 QLGTKHSLNISVSAGIVVWD 169
>gi|410582501|ref|ZP_11319607.1| rRNA methylase, putative, group 3 [Thermaerobacter subterraneus DSM
13965]
gi|410505321|gb|EKP94830.1| rRNA methylase, putative, group 3 [Thermaerobacter subterraneus DSM
13965]
Length = 306
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 1702 ASRQQ---FVLVASLIDRIPNLAGLARTCEVFKASG--LAIADANILHDKQFQLISVTAE 1756
ASR++ +++ + I NL + R+ E A G + + + L F+ +A
Sbjct: 127 ASRRREPPLLVICAGIQDPHNLGAVFRSAEAAGAHGAVVPVHRSAPLGPTAFK---SSAG 183
Query: 1757 KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIP 1816
V + V ++ + R K +G V+ + P DQ+ + + T LVLG E GIP
Sbjct: 184 ALVHLAVAQVANLNQVVRRFKEQGVWVVAADPEGAQ-PYDQWDWTRPTALVLGSEGRGIP 242
Query: 1817 VDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
++ D + IP G V SLNV V+ I L+E RQ+R
Sbjct: 243 PLLLRQCDGRVFIPMAGKVASLNVSVAAGILLFEAARQRR 282
>gi|225873641|ref|YP_002755100.1| TrmH family RNA methyltransferase [Acidobacterium capsulatum ATCC
51196]
gi|225791622|gb|ACO31712.1| RNA methyltransferase, TrmH family, group 3 [Acidobacterium
capsulatum ATCC 51196]
Length = 270
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 1667 FGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRAS----RQQFVLVASLIDRIPNLAG 1722
F NRE ++ + + V + L +E + A+ +L ++ NL
Sbjct: 55 FENREQLTRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGA 114
Query: 1723 LARTCEVFKASGLAIADANILHDKQFQLISVTAEK-------WVPIVEVPVNSIKHFLER 1775
L R+ A G + D +L +++ +S A K + I V VN ++ LE+
Sbjct: 115 LLRS-----ADGAGV-DGVLLPERRSAPLSAVAVKTSAGAAEHIRIARV-VNLVRA-LEQ 166
Query: 1776 KKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVV 1835
K + +GL++ ++ D Y + +V+VLGRE EG+ + D + IP G V
Sbjct: 167 LKEQNIWCVGLDERG-TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGV 225
Query: 1836 RSLNVHVSGAIALWEYTRQQR 1856
SLNV +GA+ L+E RQ+R
Sbjct: 226 SSLNVSAAGAVVLYEAARQRR 246
>gi|322392209|ref|ZP_08065670.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
peroris ATCC 700780]
gi|321144744|gb|EFX40144.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
peroris ATCC 700780]
Length = 242
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VP---VNSIKHFLE 1774
NL + RT + SG+ I + + V A+ +E VP V ++ L+
Sbjct: 108 NLGSILRTADATNVSGVIIP-----KHRSVGVTPVVAKTATGAIEHVPIARVTNLSQTLD 162
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ K EGF + G + N P ++ K L++G E GI +I +D I IP G
Sbjct: 163 KLKDEGFWIFGTDM--NGTPCHKWNTSGKIALIIGNEGRGISSNIKKQVDEMITIPMDGH 220
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ AI ++E R +
Sbjct: 221 VQSLNASVAAAILMYEVFRNR 241
>gi|359404915|ref|ZP_09197719.1| RNA methyltransferase, TrmH family [Prevotella stercorea DSM 18206]
gi|357559845|gb|EHJ41275.1| RNA methyltransferase, TrmH family [Prevotella stercorea DSM 18206]
Length = 180
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLD--QYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ EG V +EQ S L Q ++ +V G E +G+ +++ + D C+EIPQ G
Sbjct: 94 QKEGVFVYSIEQVEGSTKLQNLQLDTDRRYAVVFGNEVKGVHQEVVDLADGCLEIPQFGT 153
Query: 1835 VRSLNVHVSGAIALWEYTRQ 1854
SLNV V+ I +WE +Q
Sbjct: 154 KHSLNVSVTAGIVIWEVAKQ 173
>gi|332522981|ref|ZP_08399233.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus porcinus
str. Jelinkova 176]
gi|332314245|gb|EGJ27230.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus porcinus
str. Jelinkova 176]
Length = 248
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 48/262 (18%)
Query: 1595 VREDLRYSMAKDVVTIKNESLKIGEDPDCAETLSDLDKEESFSQLPKDSLLDFQKKITLP 1654
++EDLR K+V TIKN + DK+ S S PK +L D +
Sbjct: 33 IQEDLR---GKNVDTIKNLAR---------------DKKVSISWAPKKTLSDMTEGAV-- 72
Query: 1655 KHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLI 1714
H+ S+F AY +L + L A++ E +LV +
Sbjct: 73 -HQGFVLRVSAF-----AYSEL-----------ETLIAKAEKEE------NPLILVLDGL 109
Query: 1715 DRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPVNSIKHFL 1773
N + RT + K G+ I + S A + VPI V ++ L
Sbjct: 110 TDPHNFGSILRTADATKVCGVVIPKHRAVGVTPVVAKTSTGAVEHVPIARV--TNLSQTL 167
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
++ K GF + G + + P+ ++ K VL++G E +GI +I +D I IP G
Sbjct: 168 DKLKEAGFWIFGTDM--DGTPVQKWNTSGKLVLIIGSEGKGISTNIKKQVDEMITIPMDG 225
Query: 1834 VVRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ A+ ++E R +
Sbjct: 226 HVQSLNAGVAAAVLMYEVFRHK 247
>gi|444376912|ref|ZP_21176150.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
gi|443679037|gb|ELT85699.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
Length = 207
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S A WV +V ++ E K +G +L + ++ + + K T +V+G+E
Sbjct: 42 SAGARNWVDVVTH--DNTPEAFETLKAKGMQILVTNLSDTAVDFREIDYTKPTAIVMGQE 99
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 100 KTGISKQALELADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQ 144
>gi|418076648|ref|ZP_12713883.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Streptococcus pneumoniae GA47502]
gi|421290028|ref|ZP_15740779.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
pneumoniae GA54354]
gi|421305347|ref|ZP_15756003.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
pneumoniae GA62331]
gi|353748351|gb|EHD29004.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Streptococcus pneumoniae GA47502]
gi|395889269|gb|EJH00280.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
pneumoniae GA54354]
gi|395906009|gb|EJH16914.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
pneumoniae GA62331]
Length = 242
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VP---VNSIKHFLE 1774
NL + RT + SG+ I + + V A+ +E VP V ++ L+
Sbjct: 108 NLGSILRTADATNVSGVIIPK-----HRAVGVTPVVAKTATGAIEHVPIARVTNLSQTLD 162
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ K+EGF G + N P ++ K L++G E +GI +I +D I IP G
Sbjct: 163 KLKNEGFWTFGTDM--NGTPCHKWNTKGKIALIIGNEGKGISSNIKKQVDEMITIPMNGH 220
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ AI ++E R +
Sbjct: 221 VQSLNASVAAAILMYEVFRNR 241
>gi|428306659|ref|YP_007143484.1| TrmH family RNA methyltransferase [Crinalium epipsammum PCC 9333]
gi|428248194|gb|AFZ13974.1| RNA methyltransferase, TrmH family, group 3 [Crinalium epipsammum PCC
9333]
Length = 526
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 1684 ELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANIL 1743
EL D + QA+++ S Q +LVA I NL + RT E A GL I
Sbjct: 342 ELTDLIEQAKAV-------SEQPVILVADSISDPHNLGAIIRTAEAVGAQGLVIPQRRAA 394
Query: 1744 H-DKQFQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPK 1802
+ A + P+ V VN + LE K GF + G + + L F
Sbjct: 395 GVTSTVMKVGAGALETFPVARV-VN-LSRALEELKAAGFWIYGTVANSGKL-LHTVEFTG 451
Query: 1803 KTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
VLV+G E EG+ + D I IP G SLN V+ A++L+E RQ+
Sbjct: 452 PIVLVIGSEGEGLGLLTQKACDFLISIPLQGKTPSLNASVAAAMSLYEVYRQR 504
>gi|67923985|ref|ZP_00517438.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|416404859|ref|ZP_11687788.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
gi|67854160|gb|EAM49466.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|357261441|gb|EHJ10708.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
Length = 216
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 1689 VLQARSLAMETIRASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQ 1747
VL R ++ + RQ ++ + + NL+ + RTC+ + I D + ++
Sbjct: 3 VLPRRYHRIKQVLEKRQPDLTVLTEDVHKPHNLSAIIRTCD-----AVGILDVHSINTTD 57
Query: 1748 ----FQLISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKK 1803
F +S ++KW + P IK + K + ++ T S+ + +
Sbjct: 58 EFPTFSQVSQGSDKWTFLHTHP--DIKTAITYLKSKKINIYAAHFTEKSLDYRDIDYTQP 115
Query: 1804 TVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
T ++LG EK G+ + +++D I IP LG+V+SLNV V+ A+ L+E RQ+
Sbjct: 116 TAILLGAEKWGVSEEAANLVDGNIIIPMLGMVQSLNVSVAAAVILFEAQRQR 167
>gi|403730395|ref|ZP_10948973.1| putative RNA methyltransferase [Gordonia rhizosphera NBRC 16068]
gi|403202583|dbj|GAB93304.1| putative RNA methyltransferase [Gordonia rhizosphera NBRC 16068]
Length = 317
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 20/147 (13%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKW---------VPIVEVPVNSI 1769
NL + R+ F G+ I Q + SVTA W +P+ + P ++
Sbjct: 180 NLGAVIRSVAAFGGHGVLIP--------QRRSASVTAVAWRTSAGAAARLPVAQAP--NL 229
Query: 1770 KHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEI 1829
L+ G ++GL+ T + LD+Y TV+V+G E +G+ + D+ + I
Sbjct: 230 TRTLKDWASSGAQLVGLD-TEGDVTLDEYDGTGPTVIVVGSEGKGLSRLVRETCDSILSI 288
Query: 1830 PQLGVVRSLNVHVSGAIALWEYTRQQR 1856
P G V SLN V+ + L E+ RQ+R
Sbjct: 289 PMAGDVESLNASVAAGVVLAEFARQRR 315
>gi|39996562|ref|NP_952513.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
sulfurreducens PCA]
gi|409911985|ref|YP_006890450.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
sulfurreducens KN400]
gi|39983443|gb|AAR34836.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
sulfurreducens PCA]
gi|298505578|gb|ADI84301.1| 23S rRNA (2'-O-methyl-G2251)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 245
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 1696 AMETIRASRQQ-----FVLVASLIDRIPNLAGLARTCEVFKASGLAIA-DANILHDKQFQ 1749
A+E I AS Q +LV I NL L R+ A G+ I D +
Sbjct: 81 ALEDIIASWQSSGEPGLILVLDGIQDPHNLGALIRSAACAGAHGVIIPRDRAAGVTASVE 140
Query: 1750 LISVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLG 1809
IS A + +P+ +V ++ LE K EGF G +A S L + V+V+G
Sbjct: 141 KISAGATETIPVAQV--TNVVQALETLKEEGFWAFGTADSAAS-SLYSHDLTGNVVIVIG 197
Query: 1810 REKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
E EG+ + D + IP G V SLN V+G + L+E RQ+
Sbjct: 198 GEGEGVRPLVRKKCDFLVAIPLKGGVSSLNASVAGGVVLFEVVRQR 243
>gi|420337322|ref|ZP_14838888.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-315]
gi|391260200|gb|EIQ19265.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella flexneri K-315]
Length = 345
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKISLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|319790011|ref|YP_004151644.1| RNA methyltransferase, TrmH family, group 3 [Thermovibrio
ammonificans HB-1]
gi|317114513|gb|ADU97003.1| RNA methyltransferase, TrmH family, group 3 [Thermovibrio
ammonificans HB-1]
Length = 236
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 1693 RSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLIS 1752
+ L ET+ +R F + I NL +AR+ E+F GL + + +
Sbjct: 78 QELVEETV--NRNSFFFALNGITEPQNLGAIARSVELFGGVGLLLPQRGSAPINEVA-VK 134
Query: 1753 VTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREK 1812
+A + + V V+ ++ L K G +V LE I Q P +LG E
Sbjct: 135 ASAGALLHLKVVRVDFLEEGLLAFKESGGNVYALETGGRDIRDSQLKRP--LAFILGSEG 192
Query: 1813 EGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQ 1854
+GI +++ + D + IP +G + SLNV V+ IA WE R+
Sbjct: 193 KGIDAELVELADLTVTIPTVGKLPSLNVSVAAGIAAWEIFRR 234
>gi|416280055|ref|ZP_11645150.1| putative methyltransferase [Shigella boydii ATCC 9905]
gi|320182094|gb|EFW56998.1| putative methyltransferase [Shigella boydii ATCC 9905]
Length = 345
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHIQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|194432143|ref|ZP_03064432.1| RNA methyltransferase, TrmH family [Shigella dysenteriae 1012]
gi|417673409|ref|ZP_12322861.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 155-74]
gi|417690770|ref|ZP_12339990.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 5216-82]
gi|420348517|ref|ZP_14849902.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 965-58]
gi|194419672|gb|EDX35752.1| RNA methyltransferase, TrmH family [Shigella dysenteriae 1012]
gi|332088093|gb|EGI93218.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 5216-82]
gi|332089180|gb|EGI94287.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 155-74]
gi|391268683|gb|EIQ27605.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella boydii 965-58]
Length = 345
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHIQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|113476712|ref|YP_722773.1| tRNA/rRNA methyltransferase SpoU [Trichodesmium erythraeum IMS101]
gi|110167760|gb|ABG52300.1| tRNA/rRNA methyltransferase (SpoU) [Trichodesmium erythraeum IMS101]
Length = 261
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 1703 SRQQFVLVASL---IDRIP---NLAGLARTCEVFKASGLAIA--DANILHDKQFQLISVT 1754
S+ F+ + +L +D+I NL + RT GL ++ ++ H K ++ +
Sbjct: 100 SQTNFLKITTLGIVLDKIQDPGNLGTIIRTAVATNIDGLFVSRDSVDLSHPK---VVRAS 156
Query: 1755 AEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEG 1814
A +W + + ++K+ + + + +G VL +N I + K T++VLG E G
Sbjct: 157 AGEWFNLHKAISENLKNEILKLQSQGLQVLATVPNSN-INYWEIDLRKPTIIVLGNEGSG 215
Query: 1815 IPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
I D+I + D ++IP V SLNV VS AI L+E RQ++
Sbjct: 216 ISKDLIDLADYSVKIPLSNGVESLNVAVSAAIILYEIQRQRQL 258
>gi|326800579|ref|YP_004318398.1| tRNA/rRNA methyltransferase SpoU [Sphingobacterium sp. 21]
gi|326551343|gb|ADZ79728.1| tRNA/rRNA methyltransferase (SpoU) [Sphingobacterium sp. 21]
Length = 176
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQY--MFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K EG ++ +EQ S L ++ + + L+ G E G+ + + ++D C+EIPQ G
Sbjct: 89 KQEGKKIIAIEQAEGSTMLHRFTPVLGESYALIFGNEVNGVSEEAMKLIDYCVEIPQFGT 148
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
S NV +S I LW++ R+ +
Sbjct: 149 KHSFNVVISAGIVLWDFYRKLKL 171
>gi|149369726|ref|ZP_01889578.1| tRNA/rRNA methyltransferase [unidentified eubacterium SCB49]
gi|149357153|gb|EDM45708.1| tRNA/rRNA methyltransferase [unidentified eubacterium SCB49]
Length = 179
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPK-KT-VLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
K+EG ++ +EQ S+ L++Y K KT +V G E +G+ ++ D IEIPQ G
Sbjct: 96 KNEGVTICAIEQAEQSVSLEKYEVSKDKTYAVVFGNEVKGVQQTVVTESDVVIEIPQYGT 155
Query: 1835 VRSLNVHVSGAIALWEYTRQQRF 1857
SLN+ VS + +W++ ++ +
Sbjct: 156 KHSLNISVSTGVVVWDFFKKMQL 178
>gi|119357014|ref|YP_911658.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
DSM 266]
gi|119354363|gb|ABL65234.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium phaeobacteroides
DSM 266]
Length = 224
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 1702 ASRQ-QFVLVASLIDRIPNLAGLARTCEVFKASGL-AIADANILHDKQFQLISVTAEKWV 1759
A RQ LV +++ NL+ + R+C+ + A++ + D+Q T +WV
Sbjct: 3 AHRQPDLSLVMDNVNKAHNLSAIIRSCDAVGIHEIHAVSYRKNIFDRQTAAAGTT--RWV 60
Query: 1760 PIVEVPVN-SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVD 1818
EV ++ SI L G +L ++ ++ + + T L+LG E +G+ +
Sbjct: 61 ---EVTLHQSITSGLSMIAGRGMQILAASGSSKNVDFRSIDYTRPTALILGAEWDGVSTE 117
Query: 1819 IIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQ 1855
+ D I IP G++ SLNV V+ A+ L+E RQ+
Sbjct: 118 ALEAADHHISIPMHGMIESLNVSVAAAVILFEAERQR 154
>gi|42523228|ref|NP_968608.1| tRNA/rRNA methyltransferase [Bdellovibrio bacteriovorus HD100]
gi|39575433|emb|CAE79601.1| putative tRNA/rRNA methyltransferase [Bdellovibrio bacteriovorus
HD100]
Length = 258
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 1646 DFQKKITLPKHENQDNSSSSFFGNREAYKQLLEIEKEDELFDQVLQARSLAMETIRASRQ 1705
D + L KH + F +++LL +D+ F V R A S+
Sbjct: 52 DVSRLAPLEKHLTPGMTLKHFVSYAIPFERLLHKNLQDDEFLVVENDREQA-----ESKL 106
Query: 1706 QFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDK-QFQLISVTAEKWVPIVEV 1764
V V I N+ + RT E A + + L + + + ++ ++++ E
Sbjct: 107 PLVFVLDNIRSAFNVGSIFRTAECLGAEKIYLCGYTPLPTQWKVEKTAMGTQEYLAWEEA 166
Query: 1765 PVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLD 1824
P + LE K EG+ ++ LE A++ L + + T VLG E+ G+ +++ ++D
Sbjct: 167 P--KLLECLEELKDEGYRIVALETAASASDLFEKFESEPTAFVLGNERFGLDPEVLKIID 224
Query: 1825 ACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRF 1857
IP G SLNV V+ A+A +E+ RQ R
Sbjct: 225 EVRIIPLRGRKNSLNVGVTAAVAGFEWMRQWRL 257
>gi|339501393|ref|YP_004699428.1| TrmH family RNA methyltransferase [Spirochaeta caldaria DSM 7334]
gi|338835742|gb|AEJ20920.1| RNA methyltransferase, TrmH family, group 3 [Spirochaeta caldaria DSM
7334]
Length = 242
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 12/182 (6%)
Query: 1677 LEIEKEDELFDQVLQARSLAMETIRASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLA 1736
L +E +D+ + +Q +E + V+V I N + R+C+ F A +
Sbjct: 66 LYVEGKDQSNETTVQDFLAGLEE---GQDALVVVLDGITDPHNYGAILRSCDQFGADLVI 122
Query: 1737 IADANILHDKQFQLISVTAE---KWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSI 1793
+A+ D + ++S T+ WVPI V+++ +E+ K GF V G + ++
Sbjct: 123 VANRRSAKDAE--VVSKTSAGTVAWVPIA--IVSNLVRSVEQLKDAGFWVYGADMKGEAV 178
Query: 1794 PLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTR 1853
D+ + +TVL++G E GI + D + IP G V SLNV V+ + L+E R
Sbjct: 179 -YDKDL-RGRTVLIMGSEGSGISRLLKETCDGMVSIPTSGQVDSLNVSVAAGVLLYEARR 236
Query: 1854 QQ 1855
Q+
Sbjct: 237 QR 238
>gi|269957913|ref|YP_003327702.1| tRNA/rRNA methyltransferase SpoU [Xylanimonas cellulosilytica DSM
15894]
gi|269306594|gb|ACZ32144.1| tRNA/rRNA methyltransferase (SpoU) [Xylanimonas cellulosilytica DSM
15894]
Length = 283
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 1774 ERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLG 1833
E K G ++G++ S+PL+ + P VLVLG+E G+ + D + I Q G
Sbjct: 198 ESDKAVGLPLVGIDNVPGSVPLEGFALPASCVLVLGQESTGLTAPMQAACDVVLHITQHG 257
Query: 1834 VVRSLNVHVSGAIALWEYTRQQ 1855
RSLN +GAIA++ + Q
Sbjct: 258 STRSLNAGAAGAIAMFAWALQH 279
>gi|440758852|ref|ZP_20938008.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
gi|436427496|gb|ELP25177.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
Length = 232
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S + WV +V P +I +++ K + VL +A+++ + + T +++G+E
Sbjct: 64 SAGSNSWVKVVTHP--TIGDAVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQE 121
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 122 KTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQRQ 166
>gi|403059774|ref|YP_006647991.1| tRNA/rRNA methyltransferase SpoU [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807100|gb|AFR04738.1| tRNA/rRNA methyltransferase (SpoU) [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 383
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 1702 ASRQQFVLVASLIDRIPNLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPI 1761
A VL + NL G+ R+C F G+ + DA +L + TAE
Sbjct: 231 AGEHDCVLALEDVGNPHNLGGIMRSCAHFGVKGILVQDAALL---ESGAAVRTAEGGAEH 287
Query: 1762 VE-VPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDII 1820
V+ + + L ++ G++++ + L Q M P KTV+VLG+E +G+
Sbjct: 288 VKAINADDFLSVLTEFRNAGYTIV-TTSSHKGTALSQAMLPAKTVIVLGQEGDGLSDSAW 346
Query: 1821 HMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
D + I G V SLN+ V+ I L E+ RQ +
Sbjct: 347 QQGDVKVSIGGTGKVESLNISVATGILLSEWWRQNQ 382
>gi|304399040|ref|ZP_07380909.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
gi|304353500|gb|EFM17878.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
Length = 221
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 1752 SVTAEKWVPIVEVPVNSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGRE 1811
S + WV +V P +I +++ K + VL +A+++ + + T +++G+E
Sbjct: 53 SAGSNSWVKVVTHP--TIGDAVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQE 110
Query: 1812 KEGIPVDIIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
K GI + + + D I IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 111 KTGITEEALALADRQIVIPMVGMVQSLNVSVACALILYEAQRQRQ 155
>gi|426403175|ref|YP_007022146.1| RNA methylase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425859843|gb|AFY00879.1| putative RNA methylase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 236
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 1777 KHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVR 1836
K++G+ + AN+ PL + F K+ LVLG E++G+ ++I D I IP G V+
Sbjct: 115 KNQGYKIYVTHLDANAKPLHEIDFSGKSALVLGNERDGVTPEMIAAADQTIIIPMTGFVQ 174
Query: 1837 SLNVHVSGAIALWEYTRQQ 1855
S N+ V+GA+ L+ ++ +
Sbjct: 175 SFNISVAGALGLYHISQDR 193
>gi|37523750|ref|NP_927127.1| tRNA/rRNA methyltransferase [Gloeobacter violaceus PCC 7421]
gi|35214755|dbj|BAC92122.1| tRNA/rRNA methyltransferase [Gloeobacter violaceus PCC 7421]
Length = 338
Score = 57.4 bits (137), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 1708 VLVASLIDRIPNLAGLARTCEVFKASGLAIADANILH-DKQFQLISVTAEKWVPIVEVPV 1766
+L A I+ NL L R+ E F G+ + + ++ A + +PI V
Sbjct: 185 LLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIARV-- 242
Query: 1767 NSIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDAC 1826
++ +ER K G+ V+G ++ A S L + V+V+G E +GI + D
Sbjct: 243 TNLNQAIERLKEAGYQVVGTQEKA-SQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHM 301
Query: 1827 IEIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
+ IP G SLN V+G I L+E RQ+R
Sbjct: 302 VSIPLAGKTTSLNASVAGGIMLYEVMRQRR 331
>gi|432806761|ref|ZP_20040689.1| hypothetical protein A1WA_02668 [Escherichia coli KTE91]
gi|432935478|ref|ZP_20134832.1| hypothetical protein A13E_03997 [Escherichia coli KTE184]
gi|433194638|ref|ZP_20378624.1| hypothetical protein WGU_02955 [Escherichia coli KTE90]
gi|431354903|gb|ELG41629.1| hypothetical protein A1WA_02668 [Escherichia coli KTE91]
gi|431452261|gb|ELH32710.1| hypothetical protein A13E_03997 [Escherichia coli KTE184]
gi|431715138|gb|ELJ79307.1| hypothetical protein WGU_02955 [Escherichia coli KTE90]
Length = 199
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 64 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 120
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 121 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 179
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 180 LNISVATGVLLGEWWRQNK 198
>gi|432617779|ref|ZP_19853890.1| methyltransferase [Escherichia coli KTE75]
gi|431152917|gb|ELE53837.1| methyltransferase [Escherichia coli KTE75]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|432486363|ref|ZP_19728278.1| methyltransferase [Escherichia coli KTE212]
gi|433174484|ref|ZP_20359005.1| methyltransferase [Escherichia coli KTE232]
gi|431015572|gb|ELD29127.1| methyltransferase [Escherichia coli KTE212]
gi|431691136|gb|ELJ56597.1| methyltransferase [Escherichia coli KTE232]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|26109353|gb|AAN81555.1|AE016764_237 Hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli
CFT073]
Length = 370
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 235 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 291
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 292 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 350
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 351 LNISVATGVLLGEWWRQNK 369
>gi|15832701|ref|NP_311474.1| methyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|16130506|ref|NP_417076.1| predicted methyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|74313144|ref|YP_311563.1| methyltransferase [Shigella sonnei Ss046]
gi|82778009|ref|YP_404358.1| methyltransferase [Shigella dysenteriae Sd197]
gi|168752077|ref|ZP_02777099.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4113]
gi|168757754|ref|ZP_02782761.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4401]
gi|168765025|ref|ZP_02790032.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4501]
gi|168768686|ref|ZP_02793693.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4486]
gi|168773490|ref|ZP_02798497.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4196]
gi|168778560|ref|ZP_02803567.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4076]
gi|168790382|ref|ZP_02815389.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC869]
gi|168801700|ref|ZP_02826707.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC508]
gi|170019136|ref|YP_001724090.1| putative methyltransferase [Escherichia coli ATCC 8739]
gi|170082190|ref|YP_001731510.1| putative methyltransferase [Escherichia coli str. K-12 substr. DH10B]
gi|170683534|ref|YP_001744770.1| putative methyltransferase [Escherichia coli SMS-3-5]
gi|187730537|ref|YP_001881368.1| putative methyltransferase [Shigella boydii CDC 3083-94]
gi|188494800|ref|ZP_03002070.1| RNA methyltransferase, TrmH family [Escherichia coli 53638]
gi|193064052|ref|ZP_03045137.1| RNA methyltransferase, TrmH family [Escherichia coli E22]
gi|193068401|ref|ZP_03049364.1| RNA methyltransferase, TrmH family [Escherichia coli E110019]
gi|194429284|ref|ZP_03061811.1| RNA methyltransferase, TrmH family [Escherichia coli B171]
gi|194437701|ref|ZP_03069797.1| RNA methyltransferase, TrmH family [Escherichia coli 101-1]
gi|195936729|ref|ZP_03082111.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4024]
gi|208808899|ref|ZP_03251236.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4206]
gi|208814513|ref|ZP_03255842.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4045]
gi|208821234|ref|ZP_03261554.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4042]
gi|209397290|ref|YP_002272056.1| methyltransferase [Escherichia coli O157:H7 str. EC4115]
gi|209920061|ref|YP_002294145.1| putative methyltransferase [Escherichia coli SE11]
gi|217327232|ref|ZP_03443315.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
TW14588]
gi|218555164|ref|YP_002388077.1| putative methyltransferase [Escherichia coli IAI1]
gi|238901746|ref|YP_002927542.1| putative methyltransferase [Escherichia coli BW2952]
gi|251785908|ref|YP_003000212.1| methyltransferase [Escherichia coli BL21(DE3)]
gi|253772519|ref|YP_003035350.1| methyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162556|ref|YP_003045664.1| putative methyltransferase [Escherichia coli B str. REL606]
gi|254289317|ref|YP_003055065.1| methyltransferase [Escherichia coli BL21(DE3)]
gi|254794532|ref|YP_003079369.1| methyltransferase [Escherichia coli O157:H7 str. TW14359]
gi|260845267|ref|YP_003223045.1| methyltransferase [Escherichia coli O103:H2 str. 12009]
gi|260856675|ref|YP_003230566.1| methyltransferase [Escherichia coli O26:H11 str. 11368]
gi|260869267|ref|YP_003235669.1| putative methyltransferase [Escherichia coli O111:H- str. 11128]
gi|261222983|ref|ZP_05937264.1| predicted methyltransferase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259467|ref|ZP_05952000.1| putative methyltransferase [Escherichia coli O157:H7 str. FRIK966]
gi|291283857|ref|YP_003500675.1| rRNA methylase [Escherichia coli O55:H7 str. CB9615]
gi|293410997|ref|ZP_06654573.1| RNA methyltransferase [Escherichia coli B354]
gi|293446936|ref|ZP_06663358.1| methyltransferase [Escherichia coli B088]
gi|297517286|ref|ZP_06935672.1| putative methyltransferase [Escherichia coli OP50]
gi|300817642|ref|ZP_07097857.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 107-1]
gi|300904235|ref|ZP_07122094.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 84-1]
gi|300920749|ref|ZP_07137155.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 115-1]
gi|300927708|ref|ZP_07143276.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 187-1]
gi|300951699|ref|ZP_07165519.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 116-1]
gi|300958777|ref|ZP_07170890.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 175-1]
gi|301021932|ref|ZP_07185891.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 196-1]
gi|301302948|ref|ZP_07209076.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 124-1]
gi|301648346|ref|ZP_07248086.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 146-1]
gi|309784597|ref|ZP_07679232.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 1617]
gi|312973173|ref|ZP_07787345.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 1827-70]
gi|383179707|ref|YP_005457712.1| putative methyltransferase [Shigella sonnei 53G]
gi|386281647|ref|ZP_10059309.1| hypothetical protein ESBG_00007 [Escherichia sp. 4_1_40B]
gi|386594650|ref|YP_006091050.1| tRNA/rRNA methyltransferase SpoU [Escherichia coli DH1]
gi|386705847|ref|YP_006169694.1| rRNA methylase [Escherichia coli P12b]
gi|387507949|ref|YP_006160205.1| putative methyltransferase [Escherichia coli O55:H7 str. RM12579]
gi|387613231|ref|YP_006116347.1| putative RNA methyltransferase [Escherichia coli ETEC H10407]
gi|387622281|ref|YP_006129909.1| rRNA methylase [Escherichia coli DH1]
gi|388478617|ref|YP_490809.1| methyltransferase [Escherichia coli str. K-12 substr. W3110]
gi|404375926|ref|ZP_10981105.1| hypothetical protein ESCG_04570 [Escherichia sp. 1_1_43]
gi|414577313|ref|ZP_11434491.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 3233-85]
gi|415778640|ref|ZP_11489686.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3431]
gi|415803997|ref|ZP_11500837.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli E128010]
gi|415811841|ref|ZP_11504154.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli LT-68]
gi|415822355|ref|ZP_11510983.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli OK1180]
gi|415828638|ref|ZP_11515136.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli OK1357]
gi|415845861|ref|ZP_11525262.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 53G]
gi|415862537|ref|ZP_11536003.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 85-1]
gi|415880824|ref|ZP_11545282.1| putative tRNA/rRNA methyltransferase [Escherichia coli MS 79-10]
gi|416264812|ref|ZP_11641159.1| putative methyltransferase [Shigella dysenteriae CDC 74-1112]
gi|416310074|ref|ZP_11656273.1| putative methyltransferase [Escherichia coli O157:H7 str. 1044]
gi|416321742|ref|ZP_11663590.1| putative methyltransferase [Escherichia coli O157:H7 str. EC1212]
gi|416330016|ref|ZP_11669143.1| putative methyltransferase [Escherichia coli O157:H7 str. 1125]
gi|416344113|ref|ZP_11678013.1| putative methyltransferase [Escherichia coli EC4100B]
gi|416776024|ref|ZP_11874688.1| putative methyltransferase [Escherichia coli O157:H7 str. G5101]
gi|416787652|ref|ZP_11879601.1| putative methyltransferase [Escherichia coli O157:H- str. 493-89]
gi|416799355|ref|ZP_11884517.1| putative methyltransferase [Escherichia coli O157:H- str. H 2687]
gi|416809661|ref|ZP_11889200.1| putative methyltransferase [Escherichia coli O55:H7 str. 3256-97]
gi|416820328|ref|ZP_11893759.1| putative methyltransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|417122103|ref|ZP_11971361.1| RNA methyltransferase, TrmH family [Escherichia coli 97.0246]
gi|417132366|ref|ZP_11977151.1| RNA methyltransferase, TrmH family [Escherichia coli 5.0588]
gi|417154641|ref|ZP_11992770.1| RNA methyltransferase, TrmH family [Escherichia coli 96.0497]
gi|417166698|ref|ZP_12000054.1| RNA methyltransferase, TrmH family [Escherichia coli 99.0741]
gi|417176441|ref|ZP_12006237.1| RNA methyltransferase, TrmH family [Escherichia coli 3.2608]
gi|417185028|ref|ZP_12010524.1| RNA methyltransferase, TrmH family [Escherichia coli 93.0624]
gi|417188966|ref|ZP_12012524.1| RNA methyltransferase, TrmH family [Escherichia coli 4.0522]
gi|417207686|ref|ZP_12019907.1| RNA methyltransferase, TrmH family [Escherichia coli JB1-95]
gi|417232220|ref|ZP_12033618.1| RNA methyltransferase, TrmH family [Escherichia coli 5.0959]
gi|417238294|ref|ZP_12036025.1| RNA methyltransferase, TrmH family [Escherichia coli 9.0111]
gi|417251385|ref|ZP_12043150.1| RNA methyltransferase, TrmH family [Escherichia coli 4.0967]
gi|417270947|ref|ZP_12058296.1| RNA methyltransferase, TrmH family [Escherichia coli 2.4168]
gi|417278140|ref|ZP_12065456.1| RNA methyltransferase, TrmH family [Escherichia coli 3.2303]
gi|417290573|ref|ZP_12077854.1| RNA methyltransferase, TrmH family [Escherichia coli B41]
gi|417299721|ref|ZP_12086948.1| RNA methyltransferase, TrmH family [Escherichia coli 900105 (10e)]
gi|417309069|ref|ZP_12095910.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli PCN033]
gi|417582087|ref|ZP_12232889.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_B2F1]
gi|417592922|ref|ZP_12243617.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 2534-86]
gi|417609212|ref|ZP_12259715.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_DG131-3]
gi|417614053|ref|ZP_12264511.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_EH250]
gi|417619170|ref|ZP_12269584.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli G58-1]
gi|417624580|ref|ZP_12274878.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_H.1.8]
gi|417640338|ref|ZP_12290478.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli TX1999]
gi|417667987|ref|ZP_12317532.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_O31]
gi|417943613|ref|ZP_12586860.1| putative methyltransferase [Escherichia coli XH140A]
gi|417975880|ref|ZP_12616677.1| putative methyltransferase [Escherichia coli XH001]
gi|418267314|ref|ZP_12886599.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei str. Moseley]
gi|419046156|ref|ZP_13593093.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3A]
gi|419052301|ref|ZP_13599172.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3B]
gi|419058336|ref|ZP_13605141.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3C]
gi|419063803|ref|ZP_13610530.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3D]
gi|419070701|ref|ZP_13616322.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3E]
gi|419076603|ref|ZP_13622116.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3F]
gi|419081781|ref|ZP_13627229.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4A]
gi|419087638|ref|ZP_13632994.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4B]
gi|419093277|ref|ZP_13638562.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4C]
gi|419099321|ref|ZP_13644518.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4D]
gi|419105155|ref|ZP_13650283.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4E]
gi|419110615|ref|ZP_13655671.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4F]
gi|419115971|ref|ZP_13660987.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5A]
gi|419121594|ref|ZP_13666548.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5B]
gi|419127064|ref|ZP_13671946.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5C]
gi|419132602|ref|ZP_13677439.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5D]
gi|419154992|ref|ZP_13699553.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6C]
gi|419160277|ref|ZP_13704782.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6D]
gi|419165393|ref|ZP_13709848.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6E]
gi|419171253|ref|ZP_13715139.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7A]
gi|419176150|ref|ZP_13719966.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7B]
gi|419181885|ref|ZP_13725498.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7C]
gi|419187335|ref|ZP_13730847.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7D]
gi|419192633|ref|ZP_13736085.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7E]
gi|419198087|ref|ZP_13741473.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8A]
gi|419204598|ref|ZP_13747777.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8B]
gi|419210814|ref|ZP_13753891.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8C]
gi|419216726|ref|ZP_13759725.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8D]
gi|419222599|ref|ZP_13765519.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8E]
gi|419227940|ref|ZP_13770791.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9A]
gi|419233598|ref|ZP_13776373.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9B]
gi|419238951|ref|ZP_13781666.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9C]
gi|419244483|ref|ZP_13787120.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9D]
gi|419251002|ref|ZP_13793572.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9E]
gi|419256069|ref|ZP_13798582.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10A]
gi|419262377|ref|ZP_13804791.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10B]
gi|419268272|ref|ZP_13810623.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10C]
gi|419273820|ref|ZP_13816114.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10D]
gi|419279117|ref|ZP_13821363.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10E]
gi|419285283|ref|ZP_13827454.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10F]
gi|419290536|ref|ZP_13832626.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11A]
gi|419295908|ref|ZP_13837951.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11B]
gi|419301365|ref|ZP_13843364.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11C]
gi|419312499|ref|ZP_13854361.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11E]
gi|419317879|ref|ZP_13859681.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12A]
gi|419324067|ref|ZP_13865759.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12B]
gi|419330093|ref|ZP_13871695.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12C]
gi|419335670|ref|ZP_13877192.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12D]
gi|419341024|ref|ZP_13882488.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12E]
gi|419346233|ref|ZP_13887606.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13A]
gi|419350693|ref|ZP_13892029.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13B]
gi|419356116|ref|ZP_13897372.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13C]
gi|419361209|ref|ZP_13902426.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13D]
gi|419366290|ref|ZP_13907449.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13E]
gi|419371071|ref|ZP_13912188.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14A]
gi|419376519|ref|ZP_13917543.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14B]
gi|419381855|ref|ZP_13922805.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14C]
gi|419387201|ref|ZP_13928077.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14D]
gi|419397687|ref|ZP_13938455.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15B]
gi|419403029|ref|ZP_13943753.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15C]
gi|419408146|ref|ZP_13948835.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15D]
gi|419810294|ref|ZP_14335176.1| putative methyltransferase [Escherichia coli O32:H37 str. P4]
gi|419872573|ref|ZP_14394602.1| putative methyltransferase [Escherichia coli O103:H2 str. CVM9450]
gi|419883378|ref|ZP_14404488.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9545]
gi|419888729|ref|ZP_14409203.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9570]
gi|419895551|ref|ZP_14415358.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9574]
gi|419900901|ref|ZP_14420304.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM9942]
gi|419906709|ref|ZP_14425588.1| rRNA methylase [Escherichia coli O26:H11 str. CVM10026]
gi|419921495|ref|ZP_14439548.1| putative methyltransferase [Escherichia coli 541-15]
gi|419931258|ref|ZP_14448845.1| putative methyltransferase [Escherichia coli 541-1]
gi|419939222|ref|ZP_14456021.1| putative methyltransferase [Escherichia coli 75]
gi|419950925|ref|ZP_14467130.1| putative methyltransferase [Escherichia coli CUMT8]
gi|420089370|ref|ZP_14601174.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9602]
gi|420095419|ref|ZP_14606921.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9634]
gi|420105010|ref|ZP_14615591.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9455]
gi|420106297|ref|ZP_14616712.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9553]
gi|420113696|ref|ZP_14623417.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM10021]
gi|420119853|ref|ZP_14629096.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM10030]
gi|420124555|ref|ZP_14633402.1| rRNA methylase [Escherichia coli O26:H11 str. CVM10224]
gi|420135035|ref|ZP_14643130.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM9952]
gi|420270713|ref|ZP_14773071.1| hypothetical protein ECPA22_3780 [Escherichia coli PA22]
gi|420276595|ref|ZP_14778879.1| hypothetical protein ECPA40_3837 [Escherichia coli PA40]
gi|420281711|ref|ZP_14783947.1| hypothetical protein ECTW06591_3313 [Escherichia coli TW06591]
gi|420287884|ref|ZP_14790070.1| hypothetical protein ECTW10246_3843 [Escherichia coli TW10246]
gi|420293620|ref|ZP_14795736.1| hypothetical protein ECTW11039_3753 [Escherichia coli TW11039]
gi|420299463|ref|ZP_14801512.1| hypothetical protein ECTW09109_3939 [Escherichia coli TW09109]
gi|420305244|ref|ZP_14807238.1| hypothetical protein ECTW10119_4093 [Escherichia coli TW10119]
gi|420310650|ref|ZP_14812583.1| hypothetical protein ECEC1738_3678 [Escherichia coli EC1738]
gi|420316332|ref|ZP_14818207.1| hypothetical protein ECEC1734_3648 [Escherichia coli EC1734]
gi|420359847|ref|ZP_14860814.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 3226-85]
gi|420363509|ref|ZP_14864401.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 4822-66]
gi|420381566|ref|ZP_14881010.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 225-75]
gi|420386640|ref|ZP_14885988.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPECa12]
gi|420392389|ref|ZP_14891640.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPEC C342-62]
gi|421813576|ref|ZP_16249294.1| hypothetical protein EC80416_3352 [Escherichia coli 8.0416]
gi|421819391|ref|ZP_16254887.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 10.0821]
gi|421825389|ref|ZP_16260747.1| hypothetical protein ECFRIK920_3793 [Escherichia coli FRIK920]
gi|421832118|ref|ZP_16267405.1| hypothetical protein ECPA7_4275 [Escherichia coli PA7]
gi|422351969|ref|ZP_16432774.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 117-3]
gi|422767231|ref|ZP_16820958.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|422771514|ref|ZP_16825203.1| SpoU rRNA methylase [Escherichia coli E482]
gi|422777842|ref|ZP_16831494.1| SpoU rRNA methylase [Escherichia coli H120]
gi|422787200|ref|ZP_16839939.1| SpoU rRNA methylase [Escherichia coli H489]
gi|422792378|ref|ZP_16845078.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|422830069|ref|ZP_16878231.1| hypothetical protein ESNG_02736 [Escherichia coli B093]
gi|423704038|ref|ZP_17678463.1| hypothetical protein ESSG_03439 [Escherichia coli H730]
gi|423726300|ref|ZP_17700361.1| hypothetical protein ECPA31_3616 [Escherichia coli PA31]
gi|424078677|ref|ZP_17815668.1| hypothetical protein ECFDA505_3615 [Escherichia coli FDA505]
gi|424085144|ref|ZP_17821647.1| hypothetical protein ECFDA517_3979 [Escherichia coli FDA517]
gi|424091556|ref|ZP_17827500.1| hypothetical protein ECFRIK1996_3718 [Escherichia coli FRIK1996]
gi|424098174|ref|ZP_17833496.1| hypothetical protein ECFRIK1985_3912 [Escherichia coli FRIK1985]
gi|424104410|ref|ZP_17839190.1| hypothetical protein ECFRIK1990_3829 [Escherichia coli FRIK1990]
gi|424111080|ref|ZP_17845324.1| hypothetical protein EC93001_3779 [Escherichia coli 93-001]
gi|424117018|ref|ZP_17850866.1| hypothetical protein ECPA3_3791 [Escherichia coli PA3]
gi|424123199|ref|ZP_17856530.1| hypothetical protein ECPA5_3654 [Escherichia coli PA5]
gi|424129363|ref|ZP_17862279.1| hypothetical protein ECPA9_3834 [Escherichia coli PA9]
gi|424135637|ref|ZP_17868109.1| hypothetical protein ECPA10_3942 [Escherichia coli PA10]
gi|424142203|ref|ZP_17874099.1| hypothetical protein ECPA14_3805 [Escherichia coli PA14]
gi|424148632|ref|ZP_17880016.1| hypothetical protein ECPA15_3939 [Escherichia coli PA15]
gi|424154449|ref|ZP_17885413.1| hypothetical protein ECPA24_3527 [Escherichia coli PA24]
gi|424250561|ref|ZP_17890976.1| hypothetical protein ECPA25_3523 [Escherichia coli PA25]
gi|424328756|ref|ZP_17896888.1| hypothetical protein ECPA28_3865 [Escherichia coli PA28]
gi|424450883|ref|ZP_17902598.1| hypothetical protein ECPA32_3678 [Escherichia coli PA32]
gi|424457085|ref|ZP_17908231.1| hypothetical protein ECPA33_3679 [Escherichia coli PA33]
gi|424463521|ref|ZP_17913969.1| hypothetical protein ECPA39_3765 [Escherichia coli PA39]
gi|424469863|ref|ZP_17919695.1| hypothetical protein ECPA41_3767 [Escherichia coli PA41]
gi|424476385|ref|ZP_17925710.1| hypothetical protein ECPA42_3843 [Escherichia coli PA42]
gi|424482138|ref|ZP_17931128.1| hypothetical protein ECTW07945_3675 [Escherichia coli TW07945]
gi|424488298|ref|ZP_17936875.1| hypothetical protein ECTW09098_3754 [Escherichia coli TW09098]
gi|424494875|ref|ZP_17942601.1| hypothetical protein ECTW09195_3819 [Escherichia coli TW09195]
gi|424501667|ref|ZP_17948573.1| hypothetical protein ECEC4203_3757 [Escherichia coli EC4203]
gi|424507915|ref|ZP_17954320.1| hypothetical protein ECEC4196_3806 [Escherichia coli EC4196]
gi|424515237|ref|ZP_17959930.1| hypothetical protein ECTW14313_3620 [Escherichia coli TW14313]
gi|424521455|ref|ZP_17965592.1| hypothetical protein ECTW14301_3529 [Escherichia coli TW14301]
gi|424527348|ref|ZP_17971073.1| hypothetical protein ECEC4421_3592 [Escherichia coli EC4421]
gi|424533498|ref|ZP_17976857.1| hypothetical protein ECEC4422_3723 [Escherichia coli EC4422]
gi|424539597|ref|ZP_17982549.1| hypothetical protein ECEC4013_3904 [Escherichia coli EC4013]
gi|424545648|ref|ZP_17988063.1| hypothetical protein ECEC4402_3731 [Escherichia coli EC4402]
gi|424551888|ref|ZP_17993756.1| hypothetical protein ECEC4439_3687 [Escherichia coli EC4439]
gi|424564420|ref|ZP_18005430.1| hypothetical protein ECEC4437_3787 [Escherichia coli EC4437]
gi|424570553|ref|ZP_18011116.1| hypothetical protein ECEC4448_3699 [Escherichia coli EC4448]
gi|424576699|ref|ZP_18016783.1| hypothetical protein ECEC1845_3669 [Escherichia coli EC1845]
gi|424582539|ref|ZP_18022193.1| hypothetical protein ECEC1863_3404 [Escherichia coli EC1863]
gi|424754523|ref|ZP_18182437.1| rRNA methylase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424764695|ref|ZP_18192114.1| rRNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424771990|ref|ZP_18199105.1| rRNA methylase [Escherichia coli O111:H8 str. CFSAN001632]
gi|425099247|ref|ZP_18501986.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3.4870]
gi|425105305|ref|ZP_18507631.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 5.2239]
gi|425111322|ref|ZP_18513249.1| hypothetical protein EC60172_3861 [Escherichia coli 6.0172]
gi|425116061|ref|ZP_18517860.1| hypothetical protein EC80566_2721 [Escherichia coli 8.0566]
gi|425120825|ref|ZP_18522521.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.0569]
gi|425127247|ref|ZP_18528424.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.0586]
gi|425132980|ref|ZP_18533837.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.2524]
gi|425139485|ref|ZP_18539874.1| hypothetical protein EC100833_3912 [Escherichia coli 10.0833]
gi|425145279|ref|ZP_18545281.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 10.0869]
gi|425151390|ref|ZP_18551011.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.0221]
gi|425157254|ref|ZP_18556527.1| hypothetical protein ECPA34_3812 [Escherichia coli PA34]
gi|425163610|ref|ZP_18562505.1| hypothetical protein ECFDA506_4021 [Escherichia coli FDA506]
gi|425169351|ref|ZP_18567835.1| hypothetical protein ECFDA507_3756 [Escherichia coli FDA507]
gi|425175416|ref|ZP_18573545.1| hypothetical protein ECFDA504_3696 [Escherichia coli FDA504]
gi|425181446|ref|ZP_18579151.1| hypothetical protein ECFRIK1999_3866 [Escherichia coli FRIK1999]
gi|425187712|ref|ZP_18584995.1| hypothetical protein ECFRIK1997_3928 [Escherichia coli FRIK1997]
gi|425194486|ref|ZP_18591264.1| hypothetical protein ECNE1487_4079 [Escherichia coli NE1487]
gi|425200961|ref|ZP_18597179.1| hypothetical protein ECNE037_4076 [Escherichia coli NE037]
gi|425207345|ref|ZP_18603153.1| hypothetical protein ECFRIK2001_4090 [Escherichia coli FRIK2001]
gi|425213101|ref|ZP_18608511.1| hypothetical protein ECPA4_3833 [Escherichia coli PA4]
gi|425219221|ref|ZP_18614198.1| hypothetical protein ECPA23_3706 [Escherichia coli PA23]
gi|425225771|ref|ZP_18620248.1| hypothetical protein ECPA49_3833 [Escherichia coli PA49]
gi|425232035|ref|ZP_18626084.1| hypothetical protein ECPA45_3886 [Escherichia coli PA45]
gi|425237954|ref|ZP_18631683.1| hypothetical protein ECTT12B_3582 [Escherichia coli TT12B]
gi|425244170|ref|ZP_18637487.1| hypothetical protein ECMA6_3871 [Escherichia coli MA6]
gi|425250331|ref|ZP_18643277.1| hypothetical protein EC5905_3943 [Escherichia coli 5905]
gi|425256163|ref|ZP_18648691.1| hypothetical protein ECCB7326_3748 [Escherichia coli CB7326]
gi|425262419|ref|ZP_18654436.1| hypothetical protein ECEC96038_3646 [Escherichia coli EC96038]
gi|425268418|ref|ZP_18660056.1| hypothetical protein EC5412_3676 [Escherichia coli 5412]
gi|425273734|ref|ZP_18665145.1| hypothetical protein ECTW15901_2951 [Escherichia coli TW15901]
gi|425284279|ref|ZP_18675317.1| hypothetical protein ECTW00353_2884 [Escherichia coli TW00353]
gi|425289722|ref|ZP_18680562.1| hypothetical protein EC3006_3186 [Escherichia coli 3006]
gi|425295853|ref|ZP_18686064.1| hypothetical protein ECPA38_3548 [Escherichia coli PA38]
gi|425306318|ref|ZP_18696020.1| hypothetical protein ECN1_2723 [Escherichia coli N1]
gi|425312557|ref|ZP_18701750.1| hypothetical protein ECEC1735_3673 [Escherichia coli EC1735]
gi|425318552|ref|ZP_18707350.1| hypothetical protein ECEC1736_3628 [Escherichia coli EC1736]
gi|425324621|ref|ZP_18712999.1| hypothetical protein ECEC1737_3606 [Escherichia coli EC1737]
gi|425330987|ref|ZP_18718852.1| hypothetical protein ECEC1846_3727 [Escherichia coli EC1846]
gi|425337162|ref|ZP_18724544.1| hypothetical protein ECEC1847_3745 [Escherichia coli EC1847]
gi|425343504|ref|ZP_18730403.1| hypothetical protein ECEC1848_3871 [Escherichia coli EC1848]
gi|425349313|ref|ZP_18735790.1| hypothetical protein ECEC1849_3608 [Escherichia coli EC1849]
gi|425355608|ref|ZP_18741683.1| hypothetical protein ECEC1850_3860 [Escherichia coli EC1850]
gi|425361570|ref|ZP_18747227.1| hypothetical protein ECEC1856_3685 [Escherichia coli EC1856]
gi|425367752|ref|ZP_18752922.1| hypothetical protein ECEC1862_3695 [Escherichia coli EC1862]
gi|425374101|ref|ZP_18758751.1| hypothetical protein ECEC1864_3826 [Escherichia coli EC1864]
gi|425380760|ref|ZP_18764777.1| hypothetical protein ECEC1865_3766 [Escherichia coli EC1865]
gi|425386990|ref|ZP_18770556.1| hypothetical protein ECEC1866_3588 [Escherichia coli EC1866]
gi|425393678|ref|ZP_18776793.1| hypothetical protein ECEC1868_3895 [Escherichia coli EC1868]
gi|425399778|ref|ZP_18782492.1| hypothetical protein ECEC1869_3849 [Escherichia coli EC1869]
gi|425405866|ref|ZP_18788097.1| hypothetical protein ECEC1870_3641 [Escherichia coli EC1870]
gi|425412256|ref|ZP_18794027.1| hypothetical protein ECNE098_3834 [Escherichia coli NE098]
gi|425418577|ref|ZP_18799856.1| hypothetical protein ECFRIK523_3694 [Escherichia coli FRIK523]
gi|425429838|ref|ZP_18810458.1| hypothetical protein EC01304_3805 [Escherichia coli 0.1304]
gi|427805763|ref|ZP_18972830.1| hypothetical protein BN16_31781 [Escherichia coli chi7122]
gi|427810259|ref|ZP_18977324.1| hypothetical protein BN17_18681 [Escherichia coli]
gi|428948262|ref|ZP_19020555.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.1467]
gi|428954353|ref|ZP_19026162.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.1042]
gi|428960324|ref|ZP_19031640.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 89.0511]
gi|428966943|ref|ZP_19037672.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.0091]
gi|428972644|ref|ZP_19042993.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.0039]
gi|428979137|ref|ZP_19048973.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.2281]
gi|428984730|ref|ZP_19054136.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 93.0055]
gi|428991067|ref|ZP_19060068.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 93.0056]
gi|428996936|ref|ZP_19065544.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 94.0618]
gi|429003184|ref|ZP_19071319.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0183]
gi|429009264|ref|ZP_19076791.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.1288]
gi|429015796|ref|ZP_19082700.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0943]
gi|429021655|ref|ZP_19088189.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0428]
gi|429027729|ref|ZP_19093743.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0427]
gi|429033919|ref|ZP_19099453.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0939]
gi|429039975|ref|ZP_19105095.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0932]
gi|429045801|ref|ZP_19110526.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0107]
gi|429051301|ref|ZP_19115872.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0003]
gi|429056677|ref|ZP_19121002.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.1742]
gi|429062175|ref|ZP_19126200.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0007]
gi|429068449|ref|ZP_19131926.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0672]
gi|429074396|ref|ZP_19137652.1| hypothetical protein EC990678_3482 [Escherichia coli 99.0678]
gi|429079590|ref|ZP_19142730.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0713]
gi|429827611|ref|ZP_19358664.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0109]
gi|429833967|ref|ZP_19364329.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0010]
gi|432370804|ref|ZP_19613889.1| methyltransferase [Escherichia coli KTE10]
gi|432418062|ref|ZP_19660660.1| methyltransferase [Escherichia coli KTE44]
gi|432481931|ref|ZP_19723886.1| methyltransferase [Escherichia coli KTE210]
gi|432527343|ref|ZP_19764435.1| methyltransferase [Escherichia coli KTE233]
gi|432534901|ref|ZP_19771873.1| methyltransferase [Escherichia coli KTE234]
gi|432564871|ref|ZP_19801451.1| methyltransferase [Escherichia coli KTE51]
gi|432576845|ref|ZP_19813301.1| methyltransferase [Escherichia coli KTE56]
gi|432628205|ref|ZP_19864181.1| methyltransferase [Escherichia coli KTE77]
gi|432637823|ref|ZP_19873692.1| methyltransferase [Escherichia coli KTE81]
gi|432661794|ref|ZP_19897434.1| methyltransferase [Escherichia coli KTE111]
gi|432671686|ref|ZP_19907214.1| methyltransferase [Escherichia coli KTE119]
gi|432675707|ref|ZP_19911163.1| methyltransferase [Escherichia coli KTE142]
gi|432686407|ref|ZP_19921702.1| methyltransferase [Escherichia coli KTE156]
gi|432692530|ref|ZP_19927757.1| methyltransferase [Escherichia coli KTE161]
gi|432705362|ref|ZP_19940461.1| methyltransferase [Escherichia coli KTE171]
gi|432719730|ref|ZP_19954698.1| methyltransferase [Escherichia coli KTE9]
gi|432738073|ref|ZP_19972829.1| methyltransferase [Escherichia coli KTE42]
gi|432751030|ref|ZP_19985632.1| methyltransferase [Escherichia coli KTE29]
gi|432765939|ref|ZP_20000377.1| methyltransferase [Escherichia coli KTE48]
gi|432810250|ref|ZP_20044143.1| methyltransferase [Escherichia coli KTE101]
gi|432832639|ref|ZP_20066211.1| methyltransferase [Escherichia coli KTE135]
gi|432876326|ref|ZP_20094366.1| methyltransferase [Escherichia coli KTE154]
gi|432948428|ref|ZP_20143584.1| methyltransferase [Escherichia coli KTE196]
gi|432956135|ref|ZP_20147954.1| methyltransferase [Escherichia coli KTE197]
gi|432968660|ref|ZP_20157574.1| methyltransferase [Escherichia coli KTE203]
gi|433044133|ref|ZP_20231627.1| methyltransferase [Escherichia coli KTE117]
gi|433048999|ref|ZP_20236346.1| methyltransferase [Escherichia coli KTE120]
gi|433092955|ref|ZP_20279219.1| methyltransferase [Escherichia coli KTE138]
gi|433131123|ref|ZP_20316558.1| methyltransferase [Escherichia coli KTE163]
gi|433135791|ref|ZP_20321132.1| methyltransferase [Escherichia coli KTE166]
gi|433199288|ref|ZP_20383184.1| methyltransferase [Escherichia coli KTE94]
gi|442592457|ref|ZP_21010432.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442598699|ref|ZP_21016451.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|443618639|ref|YP_007382495.1| rRNA methylase [Escherichia coli APEC O78]
gi|444926140|ref|ZP_21245443.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 09BKT078844]
gi|444931851|ref|ZP_21250896.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0814]
gi|444937301|ref|ZP_21256082.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0815]
gi|444942931|ref|ZP_21261453.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0816]
gi|444948235|ref|ZP_21266550.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0839]
gi|444959485|ref|ZP_21277342.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1753]
gi|444970616|ref|ZP_21287983.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1793]
gi|444975903|ref|ZP_21293031.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1805]
gi|444981288|ref|ZP_21298203.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli ATCC 700728]
gi|444986682|ref|ZP_21303467.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA11]
gi|444991997|ref|ZP_21308644.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA19]
gi|444997302|ref|ZP_21313804.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA13]
gi|445002879|ref|ZP_21319272.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA2]
gi|445008318|ref|ZP_21324561.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA47]
gi|445013410|ref|ZP_21329521.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA48]
gi|445019278|ref|ZP_21335247.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA8]
gi|445021154|ref|ZP_21337094.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 7.1982]
gi|445030068|ref|ZP_21345747.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1781]
gi|445035536|ref|ZP_21351072.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1762]
gi|445041161|ref|ZP_21356538.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA35]
gi|445046384|ref|ZP_21361639.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3.4880]
gi|445051903|ref|ZP_21366953.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0083]
gi|445057675|ref|ZP_21372537.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0670]
gi|450246969|ref|ZP_21901078.1| rRNA methylase [Escherichia coli S17]
gi|452971637|ref|ZP_21969864.1| methyltransferase [Escherichia coli O157:H7 str. EC4009]
gi|84027943|sp|P0AGJ6.1|YFIF_ECO57 RecName: Full=Uncharacterized tRNA/rRNA methyltransferase YfiF
gi|84027944|sp|P0AGJ5.1|YFIF_ECOLI RecName: Full=Uncharacterized tRNA/rRNA methyltransferase YfiF
gi|1788935|gb|AAC75634.1| putative methyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|13362918|dbj|BAB36870.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|73856621|gb|AAZ89328.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81242157|gb|ABB62867.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|85675469|dbj|BAA16467.2| predicted methyltransferase [Escherichia coli str. K12 substr. W3110]
gi|169754064|gb|ACA76763.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli ATCC 8739]
gi|169890025|gb|ACB03732.1| predicted methyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|170521252|gb|ACB19430.1| RNA methyltransferase, TrmH family [Escherichia coli SMS-3-5]
gi|187427529|gb|ACD06803.1| RNA methyltransferase, TrmH family [Shigella boydii CDC 3083-94]
gi|187770634|gb|EDU34478.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4196]
gi|188013998|gb|EDU52120.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4113]
gi|188489999|gb|EDU65102.1| RNA methyltransferase, TrmH family [Escherichia coli 53638]
gi|189003528|gb|EDU72514.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4076]
gi|189355309|gb|EDU73728.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4401]
gi|189362321|gb|EDU80740.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4486]
gi|189365089|gb|EDU83505.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4501]
gi|189370139|gb|EDU88555.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC869]
gi|189376184|gb|EDU94600.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC508]
gi|192929287|gb|EDV82896.1| RNA methyltransferase, TrmH family [Escherichia coli E22]
gi|192958353|gb|EDV88793.1| RNA methyltransferase, TrmH family [Escherichia coli E110019]
gi|194412692|gb|EDX28987.1| RNA methyltransferase, TrmH family [Escherichia coli B171]
gi|194423507|gb|EDX39498.1| RNA methyltransferase, TrmH family [Escherichia coli 101-1]
gi|208728700|gb|EDZ78301.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4206]
gi|208735790|gb|EDZ84477.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4045]
gi|208741357|gb|EDZ89039.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4042]
gi|209158690|gb|ACI36123.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
EC4115]
gi|209762748|gb|ACI79686.1| hypothetical protein ECs3447 [Escherichia coli]
gi|209762750|gb|ACI79687.1| hypothetical protein ECs3447 [Escherichia coli]
gi|209762752|gb|ACI79688.1| hypothetical protein ECs3447 [Escherichia coli]
gi|209762754|gb|ACI79689.1| hypothetical protein ECs3447 [Escherichia coli]
gi|209762756|gb|ACI79690.1| hypothetical protein ECs3447 [Escherichia coli]
gi|209913320|dbj|BAG78394.1| putative RNA methyltransferase [Escherichia coli SE11]
gi|217319599|gb|EEC28024.1| RNA methyltransferase, TrmH family [Escherichia coli O157:H7 str.
TW14588]
gi|218361932|emb|CAQ99533.1| putative methyltransferase [Escherichia coli IAI1]
gi|238862664|gb|ACR64662.1| predicted methyltransferase [Escherichia coli BW2952]
gi|242378181|emb|CAQ32956.1| predicted methyltransferase [Escherichia coli BL21(DE3)]
gi|253323563|gb|ACT28165.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974457|gb|ACT40128.1| predicted methyltransferase [Escherichia coli B str. REL606]
gi|253978624|gb|ACT44294.1| predicted methyltransferase [Escherichia coli BL21(DE3)]
gi|254593932|gb|ACT73293.1| predicted methyltransferase [Escherichia coli O157:H7 str. TW14359]
gi|257755324|dbj|BAI26826.1| predicted methyltransferase [Escherichia coli O26:H11 str. 11368]
gi|257760414|dbj|BAI31911.1| predicted methyltransferase [Escherichia coli O103:H2 str. 12009]
gi|257765623|dbj|BAI37118.1| predicted methyltransferase [Escherichia coli O111:H- str. 11128]
gi|260448339|gb|ACX38761.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli DH1]
gi|290763730|gb|ADD57691.1| rRNA methylase [Escherichia coli O55:H7 str. CB9615]
gi|291323766|gb|EFE63194.1| methyltransferase [Escherichia coli B088]
gi|291471465|gb|EFF13949.1| RNA methyltransferase [Escherichia coli B354]
gi|299881399|gb|EFI89610.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 196-1]
gi|300314585|gb|EFJ64369.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 175-1]
gi|300403768|gb|EFJ87306.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 84-1]
gi|300412320|gb|EFJ95630.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 115-1]
gi|300449061|gb|EFK12681.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 116-1]
gi|300464261|gb|EFK27754.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 187-1]
gi|300529630|gb|EFK50692.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 107-1]
gi|300841883|gb|EFK69643.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 124-1]
gi|301073622|gb|EFK88428.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 146-1]
gi|308927494|gb|EFP72966.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 1617]
gi|309702967|emb|CBJ02298.1| putative RNA methyltransferase [Escherichia coli ETEC H10407]
gi|310331768|gb|EFP99003.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 1827-70]
gi|315137205|dbj|BAJ44364.1| rRNA methylase [Escherichia coli DH1]
gi|315256609|gb|EFU36577.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 85-1]
gi|315615843|gb|EFU96475.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3431]
gi|320176115|gb|EFW51182.1| putative methyltransferase [Shigella dysenteriae CDC 74-1112]
gi|320188922|gb|EFW63581.1| putative methyltransferase [Escherichia coli O157:H7 str. EC1212]
gi|320200145|gb|EFW74734.1| putative methyltransferase [Escherichia coli EC4100B]
gi|320640830|gb|EFX10324.1| putative methyltransferase [Escherichia coli O157:H7 str. G5101]
gi|320646176|gb|EFX15116.1| putative methyltransferase [Escherichia coli O157:H- str. 493-89]
gi|320651471|gb|EFX19867.1| putative methyltransferase [Escherichia coli O157:H- str. H 2687]
gi|320657073|gb|EFX24892.1| putative methyltransferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662738|gb|EFX30077.1| putative methyltransferase [Escherichia coli O55:H7 str. USDA 5905]
gi|323159154|gb|EFZ45145.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli E128010]
gi|323167780|gb|EFZ53475.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 53G]
gi|323173100|gb|EFZ58731.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli LT-68]
gi|323177288|gb|EFZ62876.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli OK1180]
gi|323184539|gb|EFZ69913.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli OK1357]
gi|323936321|gb|EGB32612.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|323941156|gb|EGB37341.1| SpoU rRNA methylase [Escherichia coli E482]
gi|323944581|gb|EGB40650.1| SpoU rRNA methylase [Escherichia coli H120]
gi|323961196|gb|EGB56809.1| SpoU rRNA methylase [Escherichia coli H489]
gi|323971092|gb|EGB66339.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|324020040|gb|EGB89259.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 117-3]
gi|326340387|gb|EGD64191.1| putative methyltransferase [Escherichia coli O157:H7 str. 1125]
gi|326345070|gb|EGD68814.1| putative methyltransferase [Escherichia coli O157:H7 str. 1044]
gi|338769697|gb|EGP24476.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli PCN033]
gi|342364475|gb|EGU28575.1| putative methyltransferase [Escherichia coli XH140A]
gi|342926286|gb|EGU95008.1| putative tRNA/rRNA methyltransferase [Escherichia coli MS 79-10]
gi|344194649|gb|EGV48722.1| putative methyltransferase [Escherichia coli XH001]
gi|345337097|gb|EGW69530.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 2534-86]
gi|345337858|gb|EGW70290.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_B2F1]
gi|345358421|gb|EGW90609.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_DG131-3]
gi|345362247|gb|EGW94404.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_EH250]
gi|345375884|gb|EGX07831.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli G58-1]
gi|345376557|gb|EGX08492.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_H.1.8]
gi|345392739|gb|EGX22518.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli TX1999]
gi|359332890|dbj|BAL39337.1| predicted methyltransferase [Escherichia coli str. K-12 substr.
MDS42]
gi|371607110|gb|EHN95691.1| hypothetical protein ESNG_02736 [Escherichia coli B093]
gi|374359943|gb|AEZ41650.1| putative methyltransferase [Escherichia coli O55:H7 str. RM12579]
gi|377892930|gb|EHU57370.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3B]
gi|377892986|gb|EHU57425.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3A]
gi|377904923|gb|EHU69201.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3C]
gi|377909443|gb|EHU73645.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3D]
gi|377911675|gb|EHU75844.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3E]
gi|377920588|gb|EHU84604.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC3F]
gi|377926411|gb|EHU90346.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4A]
gi|377929893|gb|EHU93781.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4B]
gi|377941437|gb|EHV05177.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4D]
gi|377941719|gb|EHV05456.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4C]
gi|377946837|gb|EHV10513.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4E]
gi|377956871|gb|EHV20414.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC4F]
gi|377960080|gb|EHV23571.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5A]
gi|377965724|gb|EHV29140.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5B]
gi|377973780|gb|EHV37113.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5C]
gi|377975565|gb|EHV38886.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5D]
gi|377995925|gb|EHV59036.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6C]
gi|378007621|gb|EHV70590.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6D]
gi|378009064|gb|EHV72021.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6E]
gi|378015297|gb|EHV78194.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7A]
gi|378023518|gb|EHV86195.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7C]
gi|378028154|gb|EHV90777.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7D]
gi|378032122|gb|EHV94704.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7B]
gi|378037986|gb|EHW00508.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC7E]
gi|378046644|gb|EHW09023.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8A]
gi|378047364|gb|EHW09730.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8B]
gi|378053510|gb|EHW15810.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8C]
gi|378060917|gb|EHW23105.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8D]
gi|378064846|gb|EHW27000.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC8E]
gi|378073338|gb|EHW35391.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9A]
gi|378076657|gb|EHW38661.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9B]
gi|378083990|gb|EHW45921.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9C]
gi|378089226|gb|EHW51070.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9D]
gi|378091632|gb|EHW53461.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC9E]
gi|378099535|gb|EHW61241.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10A]
gi|378105057|gb|EHW66705.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10B]
gi|378109958|gb|EHW71556.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10C]
gi|378115517|gb|EHW77056.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10D]
gi|378127818|gb|EHW89206.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10E]
gi|378129041|gb|EHW90419.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11A]
gi|378130627|gb|EHW91991.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC10F]
gi|378140633|gb|EHX01856.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11B]
gi|378150981|gb|EHX12096.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11C]
gi|378158127|gb|EHX19158.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11E]
gi|378164344|gb|EHX25290.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12B]
gi|378168572|gb|EHX29476.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12A]
gi|378169267|gb|EHX30166.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12C]
gi|378180546|gb|EHX41227.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12D]
gi|378185302|gb|EHX45931.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13A]
gi|378187935|gb|EHX48546.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC12E]
gi|378199497|gb|EHX59960.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13B]
gi|378199694|gb|EHX60154.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13C]
gi|378202856|gb|EHX63283.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13D]
gi|378211877|gb|EHX72208.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC13E]
gi|378216048|gb|EHX76337.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14A]
gi|378219242|gb|EHX79511.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14B]
gi|378227498|gb|EHX87670.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14C]
gi|378230646|gb|EHX90762.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC14D]
gi|378243808|gb|EHY03754.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15B]
gi|378247563|gb|EHY07482.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15C]
gi|378254525|gb|EHY14389.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15D]
gi|383104015|gb|AFG41524.1| rRNA methylase [Escherichia coli P12b]
gi|385157016|gb|EIF19010.1| putative methyltransferase [Escherichia coli O32:H37 str. P4]
gi|385707154|gb|EIG44186.1| hypothetical protein ESSG_03439 [Escherichia coli H730]
gi|386121786|gb|EIG70401.1| hypothetical protein ESBG_00007 [Escherichia sp. 4_1_40B]
gi|386147383|gb|EIG93823.1| RNA methyltransferase, TrmH family [Escherichia coli 97.0246]
gi|386150220|gb|EIH01509.1| RNA methyltransferase, TrmH family [Escherichia coli 5.0588]
gi|386167730|gb|EIH34246.1| RNA methyltransferase, TrmH family [Escherichia coli 96.0497]
gi|386171855|gb|EIH43894.1| RNA methyltransferase, TrmH family [Escherichia coli 99.0741]
gi|386179133|gb|EIH56612.1| RNA methyltransferase, TrmH family [Escherichia coli 3.2608]
gi|386183090|gb|EIH65841.1| RNA methyltransferase, TrmH family [Escherichia coli 93.0624]
gi|386192511|gb|EIH81235.1| RNA methyltransferase, TrmH family [Escherichia coli 4.0522]
gi|386197000|gb|EIH91208.1| RNA methyltransferase, TrmH family [Escherichia coli JB1-95]
gi|386205219|gb|EII09730.1| RNA methyltransferase, TrmH family [Escherichia coli 5.0959]
gi|386214072|gb|EII24497.1| RNA methyltransferase, TrmH family [Escherichia coli 9.0111]
gi|386218234|gb|EII34717.1| RNA methyltransferase, TrmH family [Escherichia coli 4.0967]
gi|386234647|gb|EII66623.1| RNA methyltransferase, TrmH family [Escherichia coli 2.4168]
gi|386239108|gb|EII76042.1| RNA methyltransferase, TrmH family [Escherichia coli 3.2303]
gi|386252895|gb|EIJ02585.1| RNA methyltransferase, TrmH family [Escherichia coli B41]
gi|386256556|gb|EIJ12050.1| RNA methyltransferase, TrmH family [Escherichia coli 900105 (10e)]
gi|388334166|gb|EIL00771.1| putative methyltransferase [Escherichia coli O103:H2 str. CVM9450]
gi|388358529|gb|EIL22961.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9545]
gi|388359302|gb|EIL23623.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9570]
gi|388360602|gb|EIL24789.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9574]
gi|388377055|gb|EIL39902.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM9942]
gi|388378431|gb|EIL41167.1| rRNA methylase [Escherichia coli O26:H11 str. CVM10026]
gi|388397541|gb|EIL58514.1| putative methyltransferase [Escherichia coli 541-15]
gi|388398784|gb|EIL59600.1| putative methyltransferase [Escherichia coli 541-1]
gi|388408381|gb|EIL68731.1| putative methyltransferase [Escherichia coli 75]
gi|388416031|gb|EIL75938.1| putative methyltransferase [Escherichia coli CUMT8]
gi|390641053|gb|EIN20490.1| hypothetical protein ECFRIK1996_3718 [Escherichia coli FRIK1996]
gi|390642870|gb|EIN22259.1| hypothetical protein ECFDA517_3979 [Escherichia coli FDA517]
gi|390643656|gb|EIN22995.1| hypothetical protein ECFDA505_3615 [Escherichia coli FDA505]
gi|390660068|gb|EIN37805.1| hypothetical protein EC93001_3779 [Escherichia coli 93-001]
gi|390661263|gb|EIN38922.1| hypothetical protein ECFRIK1985_3912 [Escherichia coli FRIK1985]
gi|390662964|gb|EIN40494.1| hypothetical protein ECFRIK1990_3829 [Escherichia coli FRIK1990]
gi|390676984|gb|EIN53062.1| hypothetical protein ECPA3_3791 [Escherichia coli PA3]
gi|390680334|gb|EIN56189.1| hypothetical protein ECPA5_3654 [Escherichia coli PA5]
gi|390683240|gb|EIN58944.1| hypothetical protein ECPA9_3834 [Escherichia coli PA9]
gi|390695898|gb|EIN70409.1| hypothetical protein ECPA10_3942 [Escherichia coli PA10]
gi|390700276|gb|EIN74587.1| hypothetical protein ECPA15_3939 [Escherichia coli PA15]
gi|390700846|gb|EIN75127.1| hypothetical protein ECPA14_3805 [Escherichia coli PA14]
gi|390714225|gb|EIN87139.1| hypothetical protein ECPA22_3780 [Escherichia coli PA22]
gi|390722127|gb|EIN94816.1| hypothetical protein ECPA25_3523 [Escherichia coli PA25]
gi|390723621|gb|EIN96209.1| hypothetical protein ECPA24_3527 [Escherichia coli PA24]
gi|390726481|gb|EIN98919.1| hypothetical protein ECPA28_3865 [Escherichia coli PA28]
gi|390741752|gb|EIO12806.1| hypothetical protein ECPA31_3616 [Escherichia coli PA31]
gi|390742224|gb|EIO13240.1| hypothetical protein ECPA32_3678 [Escherichia coli PA32]
gi|390744670|gb|EIO15514.1| hypothetical protein ECPA33_3679 [Escherichia coli PA33]
gi|390758005|gb|EIO27475.1| hypothetical protein ECPA40_3837 [Escherichia coli PA40]
gi|390766637|gb|EIO35754.1| hypothetical protein ECPA41_3767 [Escherichia coli PA41]
gi|390768063|gb|EIO37114.1| hypothetical protein ECPA39_3765 [Escherichia coli PA39]
gi|390768432|gb|EIO37463.1| hypothetical protein ECPA42_3843 [Escherichia coli PA42]
gi|390781048|gb|EIO48737.1| hypothetical protein ECTW06591_3313 [Escherichia coli TW06591]
gi|390789623|gb|EIO57072.1| hypothetical protein ECTW10246_3843 [Escherichia coli TW10246]
gi|390789954|gb|EIO57383.1| hypothetical protein ECTW07945_3675 [Escherichia coli TW07945]
gi|390795943|gb|EIO63220.1| hypothetical protein ECTW11039_3753 [Escherichia coli TW11039]
gi|390805311|gb|EIO72258.1| hypothetical protein ECTW09098_3754 [Escherichia coli TW09098]
gi|390807158|gb|EIO74060.1| hypothetical protein ECTW09109_3939 [Escherichia coli TW09109]
gi|390815549|gb|EIO82077.1| hypothetical protein ECTW10119_4093 [Escherichia coli TW10119]
gi|390825453|gb|EIO91372.1| hypothetical protein ECEC4203_3757 [Escherichia coli EC4203]
gi|390829710|gb|EIO95305.1| hypothetical protein ECTW09195_3819 [Escherichia coli TW09195]
gi|390830271|gb|EIO95818.1| hypothetical protein ECEC4196_3806 [Escherichia coli EC4196]
gi|390845694|gb|EIP09322.1| hypothetical protein ECTW14301_3529 [Escherichia coli TW14301]
gi|390845806|gb|EIP09429.1| hypothetical protein ECTW14313_3620 [Escherichia coli TW14313]
gi|390850212|gb|EIP13600.1| hypothetical protein ECEC4421_3592 [Escherichia coli EC4421]
gi|390861020|gb|EIP23302.1| hypothetical protein ECEC4422_3723 [Escherichia coli EC4422]
gi|390864949|gb|EIP27018.1| hypothetical protein ECEC4013_3904 [Escherichia coli EC4013]
gi|390870086|gb|EIP31651.1| hypothetical protein ECEC4402_3731 [Escherichia coli EC4402]
gi|390878304|gb|EIP39179.1| hypothetical protein ECEC4439_3687 [Escherichia coli EC4439]
gi|390892982|gb|EIP52552.1| hypothetical protein ECEC4437_3787 [Escherichia coli EC4437]
gi|390895565|gb|EIP55030.1| hypothetical protein ECEC4448_3699 [Escherichia coli EC4448]
gi|390899929|gb|EIP59165.1| hypothetical protein ECEC1738_3678 [Escherichia coli EC1738]
gi|390907696|gb|EIP66549.1| hypothetical protein ECEC1734_3648 [Escherichia coli EC1734]
gi|390918783|gb|EIP77172.1| hypothetical protein ECEC1863_3404 [Escherichia coli EC1863]
gi|390920054|gb|EIP78374.1| hypothetical protein ECEC1845_3669 [Escherichia coli EC1845]
gi|391280792|gb|EIQ39455.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 3226-85]
gi|391283758|gb|EIQ42371.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 3233-85]
gi|391294586|gb|EIQ52798.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei 4822-66]
gi|391299700|gb|EIQ57651.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella dysenteriae 225-75]
gi|391304563|gb|EIQ62372.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPECa12]
gi|391312156|gb|EIQ69779.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli EPEC C342-62]
gi|394387780|gb|EJE65151.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9602]
gi|394392708|gb|EJE69448.1| putative methyltransferase [Escherichia coli O111:H8 str. CVM9634]
gi|394396631|gb|EJE72963.1| rRNA methylase [Escherichia coli O26:H11 str. CVM10224]
gi|394400162|gb|EJE76098.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9455]
gi|394411286|gb|EJE85557.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM10021]
gi|394416572|gb|EJE90358.1| putative methyltransferase [Escherichia coli O111:H11 str. CVM9553]
gi|394420654|gb|EJE94172.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM9952]
gi|394430521|gb|EJF02835.1| putative methyltransferase [Escherichia coli O26:H11 str. CVM10030]
gi|397785133|gb|EJK95986.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_O31]
gi|397898707|gb|EJL15089.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Shigella sonnei str. Moseley]
gi|404290561|gb|EJZ47470.1| hypothetical protein ESCG_04570 [Escherichia sp. 1_1_43]
gi|408064490|gb|EKG98972.1| hypothetical protein ECPA7_4275 [Escherichia coli PA7]
gi|408066403|gb|EKH00862.1| hypothetical protein ECFRIK920_3793 [Escherichia coli FRIK920]
gi|408069601|gb|EKH03986.1| hypothetical protein ECPA34_3812 [Escherichia coli PA34]
gi|408079198|gb|EKH13326.1| hypothetical protein ECFDA506_4021 [Escherichia coli FDA506]
gi|408082665|gb|EKH16631.1| hypothetical protein ECFDA507_3756 [Escherichia coli FDA507]
gi|408091076|gb|EKH24313.1| hypothetical protein ECFDA504_3696 [Escherichia coli FDA504]
gi|408097062|gb|EKH29968.1| hypothetical protein ECFRIK1999_3866 [Escherichia coli FRIK1999]
gi|408103766|gb|EKH36096.1| hypothetical protein ECFRIK1997_3928 [Escherichia coli FRIK1997]
gi|408108137|gb|EKH40163.1| hypothetical protein ECNE1487_4079 [Escherichia coli NE1487]
gi|408114635|gb|EKH46161.1| hypothetical protein ECNE037_4076 [Escherichia coli NE037]
gi|408120478|gb|EKH51464.1| hypothetical protein ECFRIK2001_4090 [Escherichia coli FRIK2001]
gi|408127065|gb|EKH57569.1| hypothetical protein ECPA4_3833 [Escherichia coli PA4]
gi|408137584|gb|EKH67285.1| hypothetical protein ECPA23_3706 [Escherichia coli PA23]
gi|408139669|gb|EKH69266.1| hypothetical protein ECPA49_3833 [Escherichia coli PA49]
gi|408145872|gb|EKH75022.1| hypothetical protein ECPA45_3886 [Escherichia coli PA45]
gi|408154905|gb|EKH83235.1| hypothetical protein ECTT12B_3582 [Escherichia coli TT12B]
gi|408159429|gb|EKH87490.1| hypothetical protein ECMA6_3871 [Escherichia coli MA6]
gi|408163514|gb|EKH91380.1| hypothetical protein EC5905_3943 [Escherichia coli 5905]
gi|408173271|gb|EKI00317.1| hypothetical protein ECCB7326_3748 [Escherichia coli CB7326]
gi|408179776|gb|EKI06430.1| hypothetical protein ECEC96038_3646 [Escherichia coli EC96038]
gi|408182537|gb|EKI09043.1| hypothetical protein EC5412_3676 [Escherichia coli 5412]
gi|408193011|gb|EKI18570.1| hypothetical protein ECTW15901_2951 [Escherichia coli TW15901]
gi|408201456|gb|EKI26611.1| hypothetical protein ECTW00353_2884 [Escherichia coli TW00353]
gi|408213097|gb|EKI37601.1| hypothetical protein EC3006_3186 [Escherichia coli 3006]
gi|408217320|gb|EKI41596.1| hypothetical protein ECPA38_3548 [Escherichia coli PA38]
gi|408226775|gb|EKI50399.1| hypothetical protein ECEC1735_3673 [Escherichia coli EC1735]
gi|408227950|gb|EKI51519.1| hypothetical protein ECN1_2723 [Escherichia coli N1]
gi|408237931|gb|EKI60766.1| hypothetical protein ECEC1736_3628 [Escherichia coli EC1736]
gi|408241975|gb|EKI64580.1| hypothetical protein ECEC1737_3606 [Escherichia coli EC1737]
gi|408246358|gb|EKI68656.1| hypothetical protein ECEC1846_3727 [Escherichia coli EC1846]
gi|408255191|gb|EKI76654.1| hypothetical protein ECEC1847_3745 [Escherichia coli EC1847]
gi|408258622|gb|EKI79882.1| hypothetical protein ECEC1848_3871 [Escherichia coli EC1848]
gi|408265141|gb|EKI85896.1| hypothetical protein ECEC1849_3608 [Escherichia coli EC1849]
gi|408273926|gb|EKI93966.1| hypothetical protein ECEC1850_3860 [Escherichia coli EC1850]
gi|408276792|gb|EKI96676.1| hypothetical protein ECEC1856_3685 [Escherichia coli EC1856]
gi|408285919|gb|EKJ04902.1| hypothetical protein ECEC1862_3695 [Escherichia coli EC1862]
gi|408290725|gb|EKJ09429.1| hypothetical protein ECEC1864_3826 [Escherichia coli EC1864]
gi|408295631|gb|EKJ13936.1| hypothetical protein ECEC1865_3766 [Escherichia coli EC1865]
gi|408307331|gb|EKJ24672.1| hypothetical protein ECEC1868_3895 [Escherichia coli EC1868]
gi|408307733|gb|EKJ25062.1| hypothetical protein ECEC1866_3588 [Escherichia coli EC1866]
gi|408318459|gb|EKJ34666.1| hypothetical protein ECEC1869_3849 [Escherichia coli EC1869]
gi|408324719|gb|EKJ40645.1| hypothetical protein ECEC1870_3641 [Escherichia coli EC1870]
gi|408325832|gb|EKJ41677.1| hypothetical protein ECNE098_3834 [Escherichia coli NE098]
gi|408336054|gb|EKJ50853.1| hypothetical protein ECFRIK523_3694 [Escherichia coli FRIK523]
gi|408346049|gb|EKJ60360.1| hypothetical protein EC01304_3805 [Escherichia coli 0.1304]
gi|408549219|gb|EKK26581.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3.4870]
gi|408549385|gb|EKK26746.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 5.2239]
gi|408550500|gb|EKK27829.1| hypothetical protein EC60172_3861 [Escherichia coli 6.0172]
gi|408567773|gb|EKK43827.1| hypothetical protein EC80566_2721 [Escherichia coli 8.0566]
gi|408568371|gb|EKK44403.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.0586]
gi|408568575|gb|EKK44606.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.0569]
gi|408578539|gb|EKK54057.1| hypothetical protein EC100833_3912 [Escherichia coli 10.0833]
gi|408580800|gb|EKK56179.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 8.2524]
gi|408591058|gb|EKK65510.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 10.0869]
gi|408595934|gb|EKK70133.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.0221]
gi|408600771|gb|EKK74604.1| hypothetical protein EC80416_3352 [Escherichia coli 8.0416]
gi|408612312|gb|EKK85657.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 10.0821]
gi|412963945|emb|CCK47871.1| hypothetical protein BN16_31781 [Escherichia coli chi7122]
gi|412970438|emb|CCJ45084.1| hypothetical protein BN17_18681 [Escherichia coli]
gi|421933170|gb|EKT90964.1| rRNA methylase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421937661|gb|EKT95270.1| rRNA methylase [Escherichia coli O111:H11 str. CFSAN001630]
gi|421938978|gb|EKT96509.1| rRNA methylase [Escherichia coli O111:H8 str. CFSAN001632]
gi|427204432|gb|EKV74709.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.1042]
gi|427206206|gb|EKV76426.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 89.0511]
gi|427208121|gb|EKV78262.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 88.1467]
gi|427220573|gb|EKV89493.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.0091]
gi|427223994|gb|EKV92719.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.2281]
gi|427227526|gb|EKV96070.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 90.0039]
gi|427241558|gb|EKW08989.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 93.0056]
gi|427241835|gb|EKW09254.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 93.0055]
gi|427245354|gb|EKW12639.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 94.0618]
gi|427260153|gb|EKW26145.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0183]
gi|427260911|gb|EKW26867.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0943]
gi|427264349|gb|EKW30039.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.1288]
gi|427276005|gb|EKW40589.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0428]
gi|427278510|gb|EKW42968.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0427]
gi|427282671|gb|EKW46915.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0939]
gi|427291433|gb|EKW54839.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0932]
gi|427298688|gb|EKW61684.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0107]
gi|427300201|gb|EKW63153.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0003]
gi|427311793|gb|EKW73967.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.1742]
gi|427314876|gb|EKW76900.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0007]
gi|427319170|gb|EKW80997.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0672]
gi|427327462|gb|EKW88851.1| hypothetical protein EC990678_3482 [Escherichia coli 99.0678]
gi|427328922|gb|EKW90273.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0713]
gi|429253244|gb|EKY37736.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 96.0109]
gi|429254977|gb|EKY39334.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 97.0010]
gi|430884608|gb|ELC07547.1| methyltransferase [Escherichia coli KTE10]
gi|430938167|gb|ELC58410.1| methyltransferase [Escherichia coli KTE44]
gi|431006453|gb|ELD21459.1| methyltransferase [Escherichia coli KTE210]
gi|431059656|gb|ELD69009.1| methyltransferase [Escherichia coli KTE234]
gi|431063163|gb|ELD72420.1| methyltransferase [Escherichia coli KTE233]
gi|431092842|gb|ELD98523.1| methyltransferase [Escherichia coli KTE51]
gi|431114271|gb|ELE17819.1| methyltransferase [Escherichia coli KTE56]
gi|431162816|gb|ELE63257.1| methyltransferase [Escherichia coli KTE77]
gi|431170563|gb|ELE70756.1| methyltransferase [Escherichia coli KTE81]
gi|431198753|gb|ELE97536.1| methyltransferase [Escherichia coli KTE111]
gi|431209968|gb|ELF08035.1| methyltransferase [Escherichia coli KTE119]
gi|431213514|gb|ELF11388.1| methyltransferase [Escherichia coli KTE142]
gi|431221127|gb|ELF18449.1| methyltransferase [Escherichia coli KTE156]
gi|431226460|gb|ELF23625.1| methyltransferase [Escherichia coli KTE161]
gi|431242244|gb|ELF36665.1| methyltransferase [Escherichia coli KTE171]
gi|431261923|gb|ELF53946.1| methyltransferase [Escherichia coli KTE9]
gi|431281162|gb|ELF72067.1| methyltransferase [Escherichia coli KTE42]
gi|431296048|gb|ELF85778.1| methyltransferase [Escherichia coli KTE29]
gi|431310114|gb|ELF98307.1| methyltransferase [Escherichia coli KTE48]
gi|431363018|gb|ELG49596.1| methyltransferase [Escherichia coli KTE101]
gi|431374917|gb|ELG60262.1| methyltransferase [Escherichia coli KTE135]
gi|431419848|gb|ELH02188.1| methyltransferase [Escherichia coli KTE154]
gi|431458406|gb|ELH38743.1| methyltransferase [Escherichia coli KTE196]
gi|431466986|gb|ELH47002.1| methyltransferase [Escherichia coli KTE197]
gi|431470076|gb|ELH50000.1| methyltransferase [Escherichia coli KTE203]
gi|431555439|gb|ELI29281.1| methyltransferase [Escherichia coli KTE117]
gi|431563776|gb|ELI36974.1| methyltransferase [Escherichia coli KTE120]
gi|431609638|gb|ELI78955.1| methyltransferase [Escherichia coli KTE138]
gi|431645920|gb|ELJ13464.1| methyltransferase [Escherichia coli KTE163]
gi|431655719|gb|ELJ22750.1| methyltransferase [Escherichia coli KTE166]
gi|431720283|gb|ELJ84314.1| methyltransferase [Escherichia coli KTE94]
gi|441607728|emb|CCP95879.1| hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441652623|emb|CCQ02002.1| hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443423147|gb|AGC88051.1| rRNA methylase [Escherichia coli APEC O78]
gi|444537851|gb|ELV17760.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0814]
gi|444539411|gb|ELV19177.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 09BKT078844]
gi|444547221|gb|ELV25849.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0815]
gi|444556936|gb|ELV34301.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0839]
gi|444557835|gb|ELV35160.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0816]
gi|444572663|gb|ELV49085.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1753]
gi|444579049|gb|ELV55070.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1793]
gi|444592999|gb|ELV68237.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA11]
gi|444593074|gb|ELV68311.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli ATCC 700728]
gi|444594841|gb|ELV69996.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1805]
gi|444606441|gb|ELV81060.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA13]
gi|444606847|gb|ELV81453.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA19]
gi|444615385|gb|ELV89591.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA2]
gi|444622908|gb|ELV96852.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA47]
gi|444623749|gb|ELV97666.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA48]
gi|444629426|gb|ELW03130.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA8]
gi|444640591|gb|ELW13850.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1781]
gi|444644951|gb|ELW18046.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.1762]
gi|444649656|gb|ELW22530.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 7.1982]
gi|444654040|gb|ELW26735.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli PA35]
gi|444659443|gb|ELW31861.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3.4880]
gi|444663674|gb|ELW35884.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 95.0083]
gi|444669479|gb|ELW41462.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 99.0670]
gi|449318733|gb|EMD08796.1| rRNA methylase [Escherichia coli S17]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|15803108|ref|NP_289139.1| methyltransferase [Escherichia coli O157:H7 str. EDL933]
gi|25325044|pir||E85904 hypothetical protein yfiF [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12517002|gb|AAG57697.1|AE005488_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|432442041|ref|ZP_19684381.1| methyltransferase [Escherichia coli KTE189]
gi|433014857|ref|ZP_20203199.1| methyltransferase [Escherichia coli KTE104]
gi|433322878|ref|ZP_20400267.1| putative RNA methyltransferase [Escherichia coli J96]
gi|430966495|gb|ELC83903.1| methyltransferase [Escherichia coli KTE189]
gi|431529843|gb|ELI06538.1| methyltransferase [Escherichia coli KTE104]
gi|432348451|gb|ELL42901.1| putative RNA methyltransferase [Escherichia coli J96]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|424558074|ref|ZP_17999500.1| hypothetical protein ECEC4436_3631 [Escherichia coli EC4436]
gi|390883288|gb|EIP43730.1| hypothetical protein ECEC4436_3631 [Escherichia coli EC4436]
Length = 341
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 206 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 262
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 263 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 321
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 322 LNISVATGVLLGEWWRQNK 340
>gi|419874613|ref|ZP_14396529.1| putative methyltransferase, partial [Escherichia coli O111:H11 str.
CVM9534]
gi|388350626|gb|EIL15978.1| putative methyltransferase, partial [Escherichia coli O111:H11 str.
CVM9534]
Length = 180
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 45 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 101
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 102 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 160
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 161 LNISVATGVLLGEWWRQNK 179
>gi|419866929|ref|ZP_14389273.1| putative methyltransferase [Escherichia coli O103:H25 str. CVM9340]
gi|388333655|gb|EIL00276.1| putative methyltransferase [Escherichia coli O103:H25 str. CVM9340]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|387883778|ref|YP_006314080.1| putative methyltransferase [Escherichia coli Xuzhou21]
gi|386797236|gb|AFJ30270.1| putative methyltransferase [Escherichia coli Xuzhou21]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVPDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|417284941|ref|ZP_12072232.1| RNA methyltransferase, TrmH family [Escherichia coli TW07793]
gi|386250182|gb|EII96349.1| RNA methyltransferase, TrmH family [Escherichia coli TW07793]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|422819260|ref|ZP_16867471.1| hypothetical protein ESMG_03783 [Escherichia coli M919]
gi|385537039|gb|EIF83922.1| hypothetical protein ESMG_03783 [Escherichia coli M919]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|418041518|ref|ZP_12679739.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli W26]
gi|383475550|gb|EID67508.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli W26]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|419392700|ref|ZP_13933507.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15A]
gi|378236894|gb|EHX96933.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC15A]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|419307485|ref|ZP_13849384.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11D]
gi|378148468|gb|EHX09608.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC11D]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|419149350|ref|ZP_13694003.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6B]
gi|377992472|gb|EHV55619.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC6B]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|419137726|ref|ZP_13682519.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5E]
gi|377983141|gb|EHV46387.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC5E]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|422333615|ref|ZP_16414625.1| hypothetical protein HMPREF0986_03119 [Escherichia coli 4_1_47FAA]
gi|373245450|gb|EHP64919.1| hypothetical protein HMPREF0986_03119 [Escherichia coli 4_1_47FAA]
Length = 344
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 209 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 265
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 266 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 324
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 325 LNISVATGVLLGEWWRQNK 343
>gi|422835529|ref|ZP_16883583.1| hypothetical protein ESOG_03184 [Escherichia coli E101]
gi|371612141|gb|EHO00657.1| hypothetical protein ESOG_03184 [Escherichia coli E101]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|422972837|ref|ZP_16975449.1| hypothetical protein ESRG_02083 [Escherichia coli TA124]
gi|371597470|gb|EHN86291.1| hypothetical protein ESRG_02083 [Escherichia coli TA124]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|386625322|ref|YP_006145050.1| putative methyltransferase [Escherichia coli O7:K1 str. CE10]
gi|349739059|gb|AEQ13765.1| putative methyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|417262140|ref|ZP_12049620.1| RNA methyltransferase, TrmH family [Escherichia coli 2.3916]
gi|417635557|ref|ZP_12285769.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_S1191]
gi|418304080|ref|ZP_12915874.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli UMNF18]
gi|339416178|gb|AEJ57850.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli UMNF18]
gi|345387097|gb|EGX16926.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_S1191]
gi|386224190|gb|EII46533.1| RNA methyltransferase, TrmH family [Escherichia coli 2.3916]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|386615287|ref|YP_006134953.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli UMNK88]
gi|332344456|gb|AEE57790.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli UMNK88]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|331678578|ref|ZP_08379253.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H591]
gi|331075038|gb|EGI46358.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H591]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|331674030|ref|ZP_08374793.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli
TA280]
gi|331069303|gb|EGI40695.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli
TA280]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|331654044|ref|ZP_08355045.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli M718]
gi|331048893|gb|EGI20969.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli M718]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|331648328|ref|ZP_08349417.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli M605]
gi|331042877|gb|EGI15018.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli M605]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|331643205|ref|ZP_08344340.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H736]
gi|332278261|ref|ZP_08390674.1| conserved hypothetical protein [Shigella sp. D9]
gi|418957040|ref|ZP_13508964.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli J53]
gi|419807856|ref|ZP_14332867.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli AI27]
gi|331040003|gb|EGI12223.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H736]
gi|332100613|gb|EGJ03959.1| conserved hypothetical protein [Shigella sp. D9]
gi|384379687|gb|EIE37554.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli J53]
gi|384469139|gb|EIE53339.1| putative tRNA/rRNA methyltransferase YfiF [Escherichia coli AI27]
Length = 349
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 214 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 270
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 271 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 329
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 330 LNISVATGVLLGEWWRQNK 348
>gi|301024868|ref|ZP_07188505.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 69-1]
gi|417140758|ref|ZP_11983869.1| RNA methyltransferase, TrmH family [Escherichia coli 97.0259]
gi|419920274|ref|ZP_14438394.1| putative methyltransferase [Escherichia coli KD2]
gi|432603212|ref|ZP_19839456.1| methyltransferase [Escherichia coli KTE66]
gi|432852240|ref|ZP_20082282.1| methyltransferase [Escherichia coli KTE144]
gi|300396399|gb|EFJ79937.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 69-1]
gi|386156091|gb|EIH12438.1| RNA methyltransferase, TrmH family [Escherichia coli 97.0259]
gi|388385166|gb|EIL46865.1| putative methyltransferase [Escherichia coli KD2]
gi|431141786|gb|ELE43551.1| methyltransferase [Escherichia coli KTE66]
gi|431399496|gb|ELG82903.1| methyltransferase [Escherichia coli KTE144]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|269123132|ref|YP_003305709.1| TrmH family RNA methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314458|gb|ACZ00832.1| RNA methyltransferase, TrmH family, group 3 [Streptobacillus
moniliformis DSM 12112]
Length = 232
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVT-AEKWVPIVEVPVNSIKHFLERKK 1777
N + R+CE F SG+ + D N + + + S T A + V IV+V +I +E+ +
Sbjct: 100 NFGAIIRSCECFGVSGIIMQDRNNVKVTETVVKSSTGAIEHVDIVQV--TNIADSIEKLQ 157
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G+ V G E ++ +PKK LVLG E +G+ + D+ ++I G + S
Sbjct: 158 KYGYFVYGAEANGEKFYYEE-KYPKKKALVLGSEGKGMRKRVRESCDSILKIHLKGEINS 216
Query: 1838 LNVHVSGAIALWEYTR 1853
LNV V+ I L E ++
Sbjct: 217 LNVSVAAGILLSEMSK 232
>gi|229106374|ref|NP_754987.2| methyltransferase [Escherichia coli CFT073]
gi|300982304|ref|ZP_07176012.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 45-1]
gi|386630352|ref|YP_006150072.1| putative methyltransferase [Escherichia coli str. 'clone D i2']
gi|386635272|ref|YP_006154991.1| putative methyltransferase [Escherichia coli str. 'clone D i14']
gi|422362727|ref|ZP_16443281.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 153-1]
gi|432457647|ref|ZP_19699829.1| methyltransferase [Escherichia coli KTE201]
gi|432505386|ref|ZP_19747109.1| methyltransferase [Escherichia coli KTE220]
gi|432569669|ref|ZP_19806179.1| methyltransferase [Escherichia coli KTE53]
gi|432652109|ref|ZP_19887862.1| methyltransferase [Escherichia coli KTE87]
gi|432784500|ref|ZP_20018679.1| methyltransferase [Escherichia coli KTE63]
gi|432974736|ref|ZP_20163573.1| methyltransferase [Escherichia coli KTE209]
gi|432996291|ref|ZP_20184877.1| methyltransferase [Escherichia coli KTE218]
gi|433000862|ref|ZP_20189386.1| methyltransferase [Escherichia coli KTE223]
gi|433059061|ref|ZP_20246104.1| methyltransferase [Escherichia coli KTE124]
gi|433088268|ref|ZP_20274638.1| methyltransferase [Escherichia coli KTE137]
gi|433116474|ref|ZP_20302263.1| methyltransferase [Escherichia coli KTE153]
gi|433126144|ref|ZP_20311699.1| methyltransferase [Escherichia coli KTE160]
gi|433140212|ref|ZP_20325465.1| methyltransferase [Escherichia coli KTE167]
gi|433150129|ref|ZP_20335147.1| methyltransferase [Escherichia coli KTE174]
gi|442608325|ref|ZP_21023085.1| hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-]
[Escherichia coli Nissle 1917]
gi|300408791|gb|EFJ92329.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 45-1]
gi|315294515|gb|EFU53863.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 153-1]
gi|355421251|gb|AER85448.1| putative methyltransferase [Escherichia coli str. 'clone D i2']
gi|355426171|gb|AER90367.1| putative methyltransferase [Escherichia coli str. 'clone D i14']
gi|430981654|gb|ELC98381.1| methyltransferase [Escherichia coli KTE201]
gi|431037736|gb|ELD48712.1| methyltransferase [Escherichia coli KTE220]
gi|431099159|gb|ELE04460.1| methyltransferase [Escherichia coli KTE53]
gi|431189964|gb|ELE89381.1| methyltransferase [Escherichia coli KTE87]
gi|431328923|gb|ELG16227.1| methyltransferase [Escherichia coli KTE63]
gi|431488468|gb|ELH68103.1| methyltransferase [Escherichia coli KTE209]
gi|431505321|gb|ELH83943.1| methyltransferase [Escherichia coli KTE218]
gi|431508254|gb|ELH86528.1| methyltransferase [Escherichia coli KTE223]
gi|431568594|gb|ELI41567.1| methyltransferase [Escherichia coli KTE124]
gi|431604045|gb|ELI73461.1| methyltransferase [Escherichia coli KTE137]
gi|431633295|gb|ELJ01576.1| methyltransferase [Escherichia coli KTE153]
gi|431643656|gb|ELJ11347.1| methyltransferase [Escherichia coli KTE160]
gi|431659216|gb|ELJ26114.1| methyltransferase [Escherichia coli KTE167]
gi|431669923|gb|ELJ36288.1| methyltransferase [Escherichia coli KTE174]
gi|441710930|emb|CCQ09062.1| hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli
Nissle 1917]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|222157281|ref|YP_002557420.1| tRNA/rRNA methyltransferase yfiF [Escherichia coli LF82]
gi|387617892|ref|YP_006120914.1| putative methyltransferase [Escherichia coli O83:H1 str. NRG 857C]
gi|222034286|emb|CAP77027.1| Uncharacterized tRNA/rRNA methyltransferase yfiF [Escherichia coli
LF82]
gi|312947153|gb|ADR27980.1| putative methyltransferase [Escherichia coli O83:H1 str. NRG 857C]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|215487924|ref|YP_002330355.1| methyltransferase [Escherichia coli O127:H6 str. E2348/69]
gi|218690697|ref|YP_002398909.1| putative methyltransferase [Escherichia coli ED1a]
gi|218701096|ref|YP_002408725.1| putative methyltransferase [Escherichia coli IAI39]
gi|218706086|ref|YP_002413605.1| putative methyltransferase [Escherichia coli UMN026]
gi|293406024|ref|ZP_06650016.1| methyltransferase [Escherichia coli FVEC1412]
gi|298381824|ref|ZP_06991423.1| methyltransferase [Escherichia coli FVEC1302]
gi|300895649|ref|ZP_07114249.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 198-1]
gi|312965497|ref|ZP_07779729.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 2362-75]
gi|331684231|ref|ZP_08384827.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H299]
gi|387608233|ref|YP_006097089.1| putative RNA methyltransferase [Escherichia coli 042]
gi|415840143|ref|ZP_11521632.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli RN587/1]
gi|417280823|ref|ZP_12068123.1| RNA methyltransferase, TrmH family [Escherichia coli 3003]
gi|417587588|ref|ZP_12238356.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_C165-02]
gi|417629887|ref|ZP_12280124.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_MHI813]
gi|417756835|ref|ZP_12404909.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2B]
gi|418997606|ref|ZP_13545200.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1A]
gi|419003135|ref|ZP_13550659.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1B]
gi|419008815|ref|ZP_13556246.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1C]
gi|419014490|ref|ZP_13561838.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1D]
gi|419019509|ref|ZP_13566815.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1E]
gi|419025009|ref|ZP_13572235.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2A]
gi|419030045|ref|ZP_13577206.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2C]
gi|419035689|ref|ZP_13582775.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2D]
gi|419040733|ref|ZP_13587760.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2E]
gi|419933271|ref|ZP_14450537.1| putative methyltransferase [Escherichia coli 576-1]
gi|425278978|ref|ZP_18670216.1| hypothetical protein ECARS42123_3076 [Escherichia coli ARS4.2123]
gi|432354499|ref|ZP_19597770.1| methyltransferase [Escherichia coli KTE2]
gi|432402848|ref|ZP_19645600.1| methyltransferase [Escherichia coli KTE26]
gi|432427114|ref|ZP_19669613.1| methyltransferase [Escherichia coli KTE181]
gi|432450718|ref|ZP_19692980.1| methyltransferase [Escherichia coli KTE193]
gi|432461580|ref|ZP_19703727.1| methyltransferase [Escherichia coli KTE204]
gi|432466764|ref|ZP_19708851.1| methyltransferase [Escherichia coli KTE205]
gi|432476808|ref|ZP_19718804.1| methyltransferase [Escherichia coli KTE208]
gi|432490351|ref|ZP_19732220.1| methyltransferase [Escherichia coli KTE213]
gi|432518683|ref|ZP_19755869.1| methyltransferase [Escherichia coli KTE228]
gi|432538805|ref|ZP_19775705.1| methyltransferase [Escherichia coli KTE235]
gi|432584790|ref|ZP_19821182.1| methyltransferase [Escherichia coli KTE57]
gi|432632344|ref|ZP_19868269.1| methyltransferase [Escherichia coli KTE80]
gi|432642060|ref|ZP_19877892.1| methyltransferase [Escherichia coli KTE83]
gi|432667009|ref|ZP_19902588.1| methyltransferase [Escherichia coli KTE116]
gi|432775663|ref|ZP_20009932.1| methyltransferase [Escherichia coli KTE54]
gi|432840375|ref|ZP_20073840.1| methyltransferase [Escherichia coli KTE140]
gi|432863444|ref|ZP_20087491.1| methyltransferase [Escherichia coli KTE146]
gi|432869920|ref|ZP_20090513.1| methyltransferase [Escherichia coli KTE147]
gi|432887560|ref|ZP_20101613.1| methyltransferase [Escherichia coli KTE158]
gi|432913801|ref|ZP_20119434.1| methyltransferase [Escherichia coli KTE190]
gi|433019650|ref|ZP_20207845.1| methyltransferase [Escherichia coli KTE105]
gi|433034415|ref|ZP_20222123.1| methyltransferase [Escherichia coli KTE112]
gi|433054227|ref|ZP_20241400.1| methyltransferase [Escherichia coli KTE122]
gi|433068873|ref|ZP_20255658.1| methyltransferase [Escherichia coli KTE128]
gi|433073804|ref|ZP_20260455.1| methyltransferase [Escherichia coli KTE129]
gi|433121134|ref|ZP_20306804.1| methyltransferase [Escherichia coli KTE157]
gi|433159629|ref|ZP_20344463.1| methyltransferase [Escherichia coli KTE177]
gi|433179418|ref|ZP_20363812.1| methyltransferase [Escherichia coli KTE82]
gi|433184279|ref|ZP_20368524.1| methyltransferase [Escherichia coli KTE85]
gi|433204253|ref|ZP_20388019.1| methyltransferase [Escherichia coli KTE95]
gi|450191465|ref|ZP_21891274.1| putative methyltransferase [Escherichia coli SEPT362]
gi|215265996|emb|CAS10406.1| predicted methyltransferase [Escherichia coli O127:H6 str. E2348/69]
gi|218371082|emb|CAR18911.1| putative methyltransferase [Escherichia coli IAI39]
gi|218428261|emb|CAR09180.2| putative methyltransferase [Escherichia coli ED1a]
gi|218433183|emb|CAR14081.1| putative methyltransferase [Escherichia coli UMN026]
gi|284922533|emb|CBG35620.1| putative RNA methyltransferase [Escherichia coli 042]
gi|291428232|gb|EFF01259.1| methyltransferase [Escherichia coli FVEC1412]
gi|298279266|gb|EFI20780.1| methyltransferase [Escherichia coli FVEC1302]
gi|300360409|gb|EFJ76279.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 198-1]
gi|312289917|gb|EFR17805.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 2362-75]
gi|323188304|gb|EFZ73596.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli RN587/1]
gi|331079183|gb|EGI50385.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli H299]
gi|345335061|gb|EGW67501.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_C165-02]
gi|345372634|gb|EGX04598.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli STEC_MHI813]
gi|377843433|gb|EHU08473.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1A]
gi|377844333|gb|EHU09370.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1C]
gi|377846738|gb|EHU11745.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1B]
gi|377856458|gb|EHU21318.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1D]
gi|377859512|gb|EHU24343.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC1E]
gi|377863793|gb|EHU28598.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2A]
gi|377873409|gb|EHU38046.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2B]
gi|377877045|gb|EHU41643.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2C]
gi|377880045|gb|EHU44617.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2D]
gi|377889510|gb|EHU53971.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli DEC2E]
gi|386245152|gb|EII86882.1| RNA methyltransferase, TrmH family [Escherichia coli 3003]
gi|388414063|gb|EIL74037.1| putative methyltransferase [Escherichia coli 576-1]
gi|408200604|gb|EKI25781.1| hypothetical protein ECARS42123_3076 [Escherichia coli ARS4.2123]
gi|430874906|gb|ELB98458.1| methyltransferase [Escherichia coli KTE2]
gi|430925319|gb|ELC45992.1| methyltransferase [Escherichia coli KTE26]
gi|430954813|gb|ELC73668.1| methyltransferase [Escherichia coli KTE181]
gi|430979210|gb|ELC95996.1| methyltransferase [Escherichia coli KTE193]
gi|430988401|gb|ELD04895.1| methyltransferase [Escherichia coli KTE204]
gi|430993047|gb|ELD09406.1| methyltransferase [Escherichia coli KTE205]
gi|431004467|gb|ELD19692.1| methyltransferase [Escherichia coli KTE208]
gi|431019803|gb|ELD33197.1| methyltransferase [Escherichia coli KTE213]
gi|431050477|gb|ELD60227.1| methyltransferase [Escherichia coli KTE228]
gi|431068685|gb|ELD77159.1| methyltransferase [Escherichia coli KTE235]
gi|431115544|gb|ELE19047.1| methyltransferase [Escherichia coli KTE57]
gi|431169922|gb|ELE70137.1| methyltransferase [Escherichia coli KTE80]
gi|431181323|gb|ELE81194.1| methyltransferase [Escherichia coli KTE83]
gi|431199835|gb|ELE98562.1| methyltransferase [Escherichia coli KTE116]
gi|431317667|gb|ELG05445.1| methyltransferase [Escherichia coli KTE54]
gi|431388409|gb|ELG72145.1| methyltransferase [Escherichia coli KTE140]
gi|431404042|gb|ELG87302.1| methyltransferase [Escherichia coli KTE146]
gi|431410506|gb|ELG93668.1| methyltransferase [Escherichia coli KTE147]
gi|431415909|gb|ELG98404.1| methyltransferase [Escherichia coli KTE158]
gi|431439066|gb|ELH20435.1| methyltransferase [Escherichia coli KTE190]
gi|431529865|gb|ELI06558.1| methyltransferase [Escherichia coli KTE105]
gi|431549601|gb|ELI23680.1| methyltransferase [Escherichia coli KTE112]
gi|431569415|gb|ELI42360.1| methyltransferase [Escherichia coli KTE122]
gi|431582575|gb|ELI54590.1| methyltransferase [Escherichia coli KTE128]
gi|431587172|gb|ELI58553.1| methyltransferase [Escherichia coli KTE129]
gi|431641834|gb|ELJ09568.1| methyltransferase [Escherichia coli KTE157]
gi|431676603|gb|ELJ42688.1| methyltransferase [Escherichia coli KTE177]
gi|431700030|gb|ELJ65017.1| methyltransferase [Escherichia coli KTE82]
gi|431705376|gb|ELJ69973.1| methyltransferase [Escherichia coli KTE85]
gi|431719920|gb|ELJ83957.1| methyltransferase [Escherichia coli KTE95]
gi|449319612|gb|EMD09661.1| putative methyltransferase [Escherichia coli SEPT362]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|157156261|ref|YP_001463905.1| methyltransferase [Escherichia coli E24377A]
gi|191167962|ref|ZP_03029764.1| RNA methyltransferase, TrmH family [Escherichia coli B7A]
gi|218696209|ref|YP_002403876.1| methyltransferase [Escherichia coli 55989]
gi|300820739|ref|ZP_07100889.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 119-7]
gi|300927042|ref|ZP_07142794.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 182-1]
gi|301330317|ref|ZP_07222964.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 78-1]
gi|307313848|ref|ZP_07593464.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli W]
gi|309794365|ref|ZP_07688788.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 145-7]
gi|331669332|ref|ZP_08370180.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli
TA271]
gi|378711958|ref|YP_005276851.1| tRNA/rRNA methyltransferase SpoU [Escherichia coli KO11FL]
gi|386609983|ref|YP_006125469.1| putative methyltransferase [Escherichia coli W]
gi|386700473|ref|YP_006164310.1| putative methyltransferase [Escherichia coli KO11FL]
gi|386710471|ref|YP_006174192.1| putative methyltransferase [Escherichia coli W]
gi|407470479|ref|YP_006783078.1| methyltransferase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480858|ref|YP_006778007.1| methyltransferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481424|ref|YP_006768970.1| methyltransferase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417150437|ref|ZP_11990176.1| RNA methyltransferase, TrmH family [Escherichia coli 1.2264]
gi|417268804|ref|ZP_12056164.1| RNA methyltransferase, TrmH family [Escherichia coli 3.3884]
gi|417597893|ref|ZP_12248528.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3030-1]
gi|417806133|ref|ZP_12453079.1| putative methyltransferase [Escherichia coli O104:H4 str. LB226692]
gi|417833880|ref|ZP_12480327.1| putative methyltransferase [Escherichia coli O104:H4 str. 01-09591]
gi|418945379|ref|ZP_13498234.1| putative methyltransferase [Escherichia coli O157:H43 str. T22]
gi|422761887|ref|ZP_16815644.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|422956038|ref|ZP_16968512.1| hypothetical protein ESQG_00007 [Escherichia coli H494]
gi|422988707|ref|ZP_16979480.1| hypothetical protein EUAG_03822 [Escherichia coli O104:H4 str.
C227-11]
gi|422995599|ref|ZP_16986363.1| hypothetical protein EUBG_03250 [Escherichia coli O104:H4 str.
C236-11]
gi|423000744|ref|ZP_16991498.1| hypothetical protein EUEG_03161 [Escherichia coli O104:H4 str.
09-7901]
gi|423004416|ref|ZP_16995162.1| hypothetical protein EUDG_01900 [Escherichia coli O104:H4 str.
04-8351]
gi|423010916|ref|ZP_17001650.1| hypothetical protein EUFG_03242 [Escherichia coli O104:H4 str.
11-3677]
gi|423020144|ref|ZP_17010853.1| hypothetical protein EUHG_03254 [Escherichia coli O104:H4 str.
11-4404]
gi|423025310|ref|ZP_17016007.1| hypothetical protein EUIG_03255 [Escherichia coli O104:H4 str.
11-4522]
gi|423031130|ref|ZP_17021818.1| hypothetical protein EUJG_01889 [Escherichia coli O104:H4 str.
11-4623]
gi|423038956|ref|ZP_17029630.1| hypothetical protein EUKG_03233 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423044076|ref|ZP_17034743.1| hypothetical protein EULG_03251 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423045804|ref|ZP_17036464.1| hypothetical protein EUMG_02822 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423054343|ref|ZP_17043150.1| hypothetical protein EUNG_04060 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423061318|ref|ZP_17050114.1| hypothetical protein EUOG_03258 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423706702|ref|ZP_17681085.1| hypothetical protein ESTG_01178 [Escherichia coli B799]
gi|425423426|ref|ZP_18804594.1| hypothetical protein EC01288_2785 [Escherichia coli 0.1288]
gi|429720171|ref|ZP_19255100.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772072|ref|ZP_19304093.1| methyltransferase [Escherichia coli O104:H4 str. 11-02030]
gi|429777017|ref|ZP_19308993.1| methyltransferase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785744|ref|ZP_19317640.1| methyltransferase [Escherichia coli O104:H4 str. 11-02092]
gi|429791634|ref|ZP_19323489.1| methyltransferase [Escherichia coli O104:H4 str. 11-02093]
gi|429792482|ref|ZP_19324332.1| methyltransferase [Escherichia coli O104:H4 str. 11-02281]
gi|429799058|ref|ZP_19330857.1| methyltransferase [Escherichia coli O104:H4 str. 11-02318]
gi|429807571|ref|ZP_19339296.1| methyltransferase [Escherichia coli O104:H4 str. 11-02913]
gi|429812471|ref|ZP_19344155.1| methyltransferase [Escherichia coli O104:H4 str. 11-03439]
gi|429817992|ref|ZP_19349631.1| methyltransferase [Escherichia coli O104:H4 str. 11-04080]
gi|429823204|ref|ZP_19354799.1| methyltransferase [Escherichia coli O104:H4 str. 11-03943]
gi|429904579|ref|ZP_19370558.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908717|ref|ZP_19374681.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914588|ref|ZP_19380536.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919618|ref|ZP_19385550.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925438|ref|ZP_19391352.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929375|ref|ZP_19395277.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935914|ref|ZP_19401800.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941594|ref|ZP_19407468.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944274|ref|ZP_19410137.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951833|ref|ZP_19417679.1| methyltransferase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955182|ref|ZP_19421014.1| methyltransferase [Escherichia coli O104:H4 str. Ec12-0466]
gi|432377791|ref|ZP_19620780.1| methyltransferase [Escherichia coli KTE12]
gi|432835535|ref|ZP_20069073.1| methyltransferase [Escherichia coli KTE136]
gi|450219838|ref|ZP_21896278.1| putative methyltransferase [Escherichia coli O08]
gi|157078291|gb|ABV17999.1| RNA methyltransferase, TrmH family [Escherichia coli E24377A]
gi|190901969|gb|EDV61716.1| RNA methyltransferase, TrmH family [Escherichia coli B7A]
gi|218352941|emb|CAU98740.1| putative methyltransferase [Escherichia coli 55989]
gi|300416926|gb|EFK00237.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 182-1]
gi|300526492|gb|EFK47561.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 119-7]
gi|300843651|gb|EFK71411.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 78-1]
gi|306906349|gb|EFN36864.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli W]
gi|308121821|gb|EFO59083.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 145-7]
gi|315061900|gb|ADT76227.1| predicted methyltransferase [Escherichia coli W]
gi|323377519|gb|ADX49787.1| tRNA/rRNA methyltransferase (SpoU) [Escherichia coli KO11FL]
gi|324118209|gb|EGC12105.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|331064526|gb|EGI36437.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli
TA271]
gi|340733524|gb|EGR62655.1| putative methyltransferase [Escherichia coli O104:H4 str. 01-09591]
gi|340739428|gb|EGR73663.1| putative methyltransferase [Escherichia coli O104:H4 str. LB226692]
gi|345352416|gb|EGW84665.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Escherichia coli 3030-1]
gi|354862434|gb|EHF22872.1| hypothetical protein EUBG_03250 [Escherichia coli O104:H4 str.
C236-11]
gi|354867718|gb|EHF28140.1| hypothetical protein EUAG_03822 [Escherichia coli O104:H4 str.
C227-11]
gi|354868819|gb|EHF29232.1| hypothetical protein EUDG_01900 [Escherichia coli O104:H4 str.
04-8351]
gi|354873715|gb|EHF34092.1| hypothetical protein EUEG_03161 [Escherichia coli O104:H4 str.
09-7901]
gi|354880399|gb|EHF40735.1| hypothetical protein EUFG_03242 [Escherichia coli O104:H4 str.
11-3677]
gi|354889188|gb|EHF49441.1| hypothetical protein EUHG_03254 [Escherichia coli O104:H4 str.
11-4404]
gi|354893418|gb|EHF53622.1| hypothetical protein EUIG_03255 [Escherichia coli O104:H4 str.
11-4522]
gi|354894369|gb|EHF54565.1| hypothetical protein EUKG_03233 [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354897161|gb|EHF57322.1| hypothetical protein EUJG_01889 [Escherichia coli O104:H4 str.
11-4623]
gi|354898525|gb|EHF58679.1| hypothetical protein EULG_03251 [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354912293|gb|EHF72294.1| hypothetical protein EUOG_03258 [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354915249|gb|EHF75229.1| hypothetical protein EUMG_02822 [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354917483|gb|EHF77449.1| hypothetical protein EUNG_04060 [Escherichia coli O104:H4 str.
11-4632 C4]
gi|371600423|gb|EHN89196.1| hypothetical protein ESQG_00007 [Escherichia coli H494]
gi|375319304|gb|EHS65496.1| putative methyltransferase [Escherichia coli O157:H43 str. T22]
gi|383392000|gb|AFH16958.1| putative methyltransferase [Escherichia coli KO11FL]
gi|383406163|gb|AFH12406.1| putative methyltransferase [Escherichia coli W]
gi|385711667|gb|EIG48625.1| hypothetical protein ESTG_01178 [Escherichia coli B799]
gi|386159931|gb|EIH21742.1| RNA methyltransferase, TrmH family [Escherichia coli 1.2264]
gi|386227609|gb|EII54965.1| RNA methyltransferase, TrmH family [Escherichia coli 3.3884]
gi|406776586|gb|AFS56010.1| putative methyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053155|gb|AFS73206.1| putative methyltransferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066514|gb|AFS87561.1| putative methyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408343318|gb|EKJ57722.1| hypothetical protein EC01288_2785 [Escherichia coli 0.1288]
gi|429348322|gb|EKY85092.1| methyltransferase [Escherichia coli O104:H4 str. 11-02092]
gi|429359068|gb|EKY95734.1| methyltransferase [Escherichia coli O104:H4 str. 11-02030]
gi|429361399|gb|EKY98054.1| methyltransferase [Escherichia coli O104:H4 str. 11-02093]
gi|429361706|gb|EKY98359.1| methyltransferase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429364346|gb|EKZ00966.1| methyltransferase [Escherichia coli O104:H4 str. 11-02318]
gi|429375195|gb|EKZ11733.1| methyltransferase [Escherichia coli O104:H4 str. 11-02913]
gi|429376352|gb|EKZ12881.1| methyltransferase [Escherichia coli O104:H4 str. 11-02281]
gi|429378661|gb|EKZ15169.1| methyltransferase [Escherichia coli O104:H4 str. 11-03439]
gi|429379525|gb|EKZ16025.1| methyltransferase [Escherichia coli O104:H4 str. 11-03943]
gi|429391228|gb|EKZ27633.1| methyltransferase [Escherichia coli O104:H4 str. 11-04080]
gi|429405592|gb|EKZ41858.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406128|gb|EKZ42389.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410033|gb|EKZ46258.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413945|gb|EKZ50125.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429420723|gb|EKZ56848.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429428895|gb|EKZ64970.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432448|gb|EKZ68488.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436654|gb|EKZ72670.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438859|gb|EKZ74852.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429447228|gb|EKZ83152.1| methyltransferase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451481|gb|EKZ87372.1| methyltransferase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429458139|gb|EKZ93977.1| methyltransferase [Escherichia coli O104:H4 str. Ec12-0466]
gi|430897811|gb|ELC20005.1| methyltransferase [Escherichia coli KTE12]
gi|431384699|gb|ELG68745.1| methyltransferase [Escherichia coli KTE136]
gi|449316943|gb|EMD07042.1| putative methyltransferase [Escherichia coli O08]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|110642743|ref|YP_670473.1| methyltransferase [Escherichia coli 536]
gi|191174012|ref|ZP_03035529.1| RNA methyltransferase, TrmH family [Escherichia coli F11]
gi|227887617|ref|ZP_04005422.1| methyltransferase [Escherichia coli 83972]
gi|300935715|ref|ZP_07150684.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 21-1]
gi|300974114|ref|ZP_07172464.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 200-1]
gi|301047220|ref|ZP_07194312.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 185-1]
gi|306814355|ref|ZP_07448517.1| putative methyltransferase [Escherichia coli NC101]
gi|386620183|ref|YP_006139763.1| putative tRNA/rRNA methyltransferase [Escherichia coli NA114]
gi|386640108|ref|YP_006106906.1| tRNA/rRNA methyltransferase YfiF [Escherichia coli ABU 83972]
gi|387830473|ref|YP_003350410.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|416335734|ref|ZP_11672427.1| putative methyltransferase [Escherichia coli WV_060327]
gi|417663131|ref|ZP_12312712.1| hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli AA86]
gi|422374277|ref|ZP_16454564.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 60-1]
gi|425301435|ref|ZP_18691326.1| hypothetical protein EC07798_3256 [Escherichia coli 07798]
gi|432382270|ref|ZP_19625213.1| methyltransferase [Escherichia coli KTE15]
gi|432388250|ref|ZP_19631133.1| methyltransferase [Escherichia coli KTE16]
gi|432398531|ref|ZP_19641310.1| methyltransferase [Escherichia coli KTE25]
gi|432407657|ref|ZP_19650365.1| methyltransferase [Escherichia coli KTE28]
gi|432412748|ref|ZP_19655410.1| methyltransferase [Escherichia coli KTE39]
gi|432422927|ref|ZP_19665471.1| methyltransferase [Escherichia coli KTE178]
gi|432432824|ref|ZP_19675251.1| methyltransferase [Escherichia coli KTE187]
gi|432437307|ref|ZP_19679695.1| methyltransferase [Escherichia coli KTE188]
gi|432471904|ref|ZP_19713948.1| methyltransferase [Escherichia coli KTE206]
gi|432496643|ref|ZP_19738439.1| methyltransferase [Escherichia coli KTE214]
gi|432501067|ref|ZP_19742824.1| methyltransferase [Escherichia coli KTE216]
gi|432514881|ref|ZP_19752103.1| methyltransferase [Escherichia coli KTE224]
gi|432524780|ref|ZP_19761907.1| methyltransferase [Escherichia coli KTE230]
gi|432554624|ref|ZP_19791345.1| methyltransferase [Escherichia coli KTE47]
gi|432559790|ref|ZP_19796459.1| methyltransferase [Escherichia coli KTE49]
gi|432593801|ref|ZP_19830116.1| methyltransferase [Escherichia coli KTE60]
gi|432608469|ref|ZP_19844653.1| methyltransferase [Escherichia coli KTE67]
gi|432612440|ref|ZP_19848602.1| methyltransferase [Escherichia coli KTE72]
gi|432647103|ref|ZP_19882892.1| methyltransferase [Escherichia coli KTE86]
gi|432656738|ref|ZP_19892441.1| methyltransferase [Escherichia coli KTE93]
gi|432681193|ref|ZP_19916566.1| methyltransferase [Escherichia coli KTE143]
gi|432695394|ref|ZP_19930592.1| methyltransferase [Escherichia coli KTE162]
gi|432700009|ref|ZP_19935162.1| methyltransferase [Escherichia coli KTE169]
gi|432711595|ref|ZP_19946653.1| methyltransferase [Escherichia coli KTE6]
gi|432714316|ref|ZP_19949352.1| methyltransferase [Escherichia coli KTE8]
gi|432724051|ref|ZP_19958968.1| methyltransferase [Escherichia coli KTE17]
gi|432728632|ref|ZP_19963510.1| methyltransferase [Escherichia coli KTE18]
gi|432742316|ref|ZP_19977035.1| methyltransferase [Escherichia coli KTE23]
gi|432746574|ref|ZP_19981239.1| methyltransferase [Escherichia coli KTE43]
gi|432802772|ref|ZP_20036741.1| methyltransferase [Escherichia coli KTE84]
gi|432845537|ref|ZP_20078337.1| methyltransferase [Escherichia coli KTE141]
gi|432895549|ref|ZP_20107269.1| methyltransferase [Escherichia coli KTE165]
gi|432905904|ref|ZP_20114704.1| methyltransferase [Escherichia coli KTE194]
gi|432920554|ref|ZP_20124189.1| methyltransferase [Escherichia coli KTE173]
gi|432928151|ref|ZP_20129404.1| methyltransferase [Escherichia coli KTE175]
gi|432938917|ref|ZP_20137160.1| methyltransferase [Escherichia coli KTE183]
gi|432972734|ref|ZP_20161600.1| methyltransferase [Escherichia coli KTE207]
gi|432981954|ref|ZP_20170729.1| methyltransferase [Escherichia coli KTE211]
gi|432986291|ref|ZP_20175012.1| methyltransferase [Escherichia coli KTE215]
gi|432991682|ref|ZP_20180346.1| methyltransferase [Escherichia coli KTE217]
gi|433039580|ref|ZP_20227178.1| methyltransferase [Escherichia coli KTE113]
gi|433078757|ref|ZP_20265284.1| methyltransferase [Escherichia coli KTE131]
gi|433083489|ref|ZP_20269945.1| methyltransferase [Escherichia coli KTE133]
gi|433097396|ref|ZP_20283579.1| methyltransferase [Escherichia coli KTE139]
gi|433102115|ref|ZP_20288195.1| methyltransferase [Escherichia coli KTE145]
gi|433106840|ref|ZP_20292812.1| methyltransferase [Escherichia coli KTE148]
gi|433111816|ref|ZP_20297677.1| methyltransferase [Escherichia coli KTE150]
gi|433145178|ref|ZP_20330319.1| methyltransferase [Escherichia coli KTE168]
gi|433189315|ref|ZP_20373412.1| methyltransferase [Escherichia coli KTE88]
gi|433208708|ref|ZP_20392382.1| methyltransferase [Escherichia coli KTE97]
gi|433213492|ref|ZP_20397082.1| methyltransferase [Escherichia coli KTE99]
gi|110344335|gb|ABG70572.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli 536]
gi|190905703|gb|EDV65325.1| RNA methyltransferase, TrmH family [Escherichia coli F11]
gi|227835967|gb|EEJ46433.1| methyltransferase [Escherichia coli 83972]
gi|281179630|dbj|BAI55960.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|300300897|gb|EFJ57282.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 185-1]
gi|300308937|gb|EFJ63457.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 200-1]
gi|300459104|gb|EFK22597.1| RNA 2'-O ribose methyltransferase substrate binding [Escherichia coli
MS 21-1]
gi|305851749|gb|EFM52201.1| putative methyltransferase [Escherichia coli NC101]
gi|307554600|gb|ADN47375.1| hypothetical tRNA/rRNA methyltransferase YfiF [Escherichia coli ABU
83972]
gi|320196417|gb|EFW71041.1| putative methyltransferase [Escherichia coli WV_060327]
gi|324014374|gb|EGB83593.1| RNA 2'-O ribose methyltransferase substrate binding protein
[Escherichia coli MS 60-1]
gi|330912349|gb|EGH40859.1| hypothetical tRNA/rRNA methyltransferase yfiF [Escherichia coli AA86]
gi|333970684|gb|AEG37489.1| putative tRNA/rRNA methyltransferase [Escherichia coli NA114]
gi|408212827|gb|EKI37340.1| hypothetical protein EC07798_3256 [Escherichia coli 07798]
gi|430905147|gb|ELC26822.1| methyltransferase [Escherichia coli KTE16]
gi|430907745|gb|ELC29243.1| methyltransferase [Escherichia coli KTE15]
gi|430914779|gb|ELC35874.1| methyltransferase [Escherichia coli KTE25]
gi|430929131|gb|ELC49652.1| methyltransferase [Escherichia coli KTE28]
gi|430934603|gb|ELC54958.1| methyltransferase [Escherichia coli KTE39]
gi|430943663|gb|ELC63770.1| methyltransferase [Escherichia coli KTE178]
gi|430952192|gb|ELC71399.1| methyltransferase [Escherichia coli KTE187]
gi|430962638|gb|ELC80495.1| methyltransferase [Escherichia coli KTE188]
gi|430997646|gb|ELD13907.1| methyltransferase [Escherichia coli KTE206]
gi|431023901|gb|ELD37096.1| methyltransferase [Escherichia coli KTE214]
gi|431028644|gb|ELD41688.1| methyltransferase [Escherichia coli KTE216]
gi|431041267|gb|ELD51798.1| methyltransferase [Escherichia coli KTE224]
gi|431051231|gb|ELD60906.1| methyltransferase [Escherichia coli KTE230]
gi|431083289|gb|ELD89596.1| methyltransferase [Escherichia coli KTE47]
gi|431091010|gb|ELD96761.1| methyltransferase [Escherichia coli KTE49]
gi|431127129|gb|ELE29444.1| methyltransferase [Escherichia coli KTE60]
gi|431137413|gb|ELE39260.1| methyltransferase [Escherichia coli KTE67]
gi|431148614|gb|ELE49905.1| methyltransferase [Escherichia coli KTE72]
gi|431179758|gb|ELE79650.1| methyltransferase [Escherichia coli KTE86]
gi|431190604|gb|ELE90003.1| methyltransferase [Escherichia coli KTE93]
gi|431219923|gb|ELF17312.1| methyltransferase [Escherichia coli KTE143]
gi|431233482|gb|ELF29073.1| methyltransferase [Escherichia coli KTE162]
gi|431242985|gb|ELF37375.1| methyltransferase [Escherichia coli KTE169]
gi|431248547|gb|ELF42741.1| methyltransferase [Escherichia coli KTE6]
gi|431255524|gb|ELF48772.1| methyltransferase [Escherichia coli KTE8]
gi|431264643|gb|ELF56348.1| methyltransferase [Escherichia coli KTE17]
gi|431273184|gb|ELF64282.1| methyltransferase [Escherichia coli KTE18]
gi|431284007|gb|ELF74866.1| methyltransferase [Escherichia coli KTE23]
gi|431291112|gb|ELF81635.1| methyltransferase [Escherichia coli KTE43]
gi|431347914|gb|ELG34791.1| methyltransferase [Escherichia coli KTE84]
gi|431394393|gb|ELG77929.1| methyltransferase [Escherichia coli KTE141]
gi|431421916|gb|ELH04128.1| methyltransferase [Escherichia coli KTE165]
gi|431431975|gb|ELH13749.1| methyltransferase [Escherichia coli KTE194]
gi|431441756|gb|ELH22864.1| methyltransferase [Escherichia coli KTE173]
gi|431443116|gb|ELH24194.1| methyltransferase [Escherichia coli KTE175]
gi|431462903|gb|ELH43110.1| methyltransferase [Escherichia coli KTE183]
gi|431480872|gb|ELH60588.1| methyltransferase [Escherichia coli KTE207]
gi|431491263|gb|ELH70870.1| methyltransferase [Escherichia coli KTE211]
gi|431495764|gb|ELH75350.1| methyltransferase [Escherichia coli KTE217]
gi|431499185|gb|ELH78366.1| methyltransferase [Escherichia coli KTE215]
gi|431550692|gb|ELI24681.1| methyltransferase [Escherichia coli KTE113]
gi|431595705|gb|ELI65696.1| methyltransferase [Escherichia coli KTE131]
gi|431601613|gb|ELI71129.1| methyltransferase [Escherichia coli KTE133]
gi|431614977|gb|ELI84111.1| methyltransferase [Escherichia coli KTE139]
gi|431618394|gb|ELI87368.1| methyltransferase [Escherichia coli KTE145]
gi|431626548|gb|ELI95097.1| methyltransferase [Escherichia coli KTE148]
gi|431627559|gb|ELI95961.1| methyltransferase [Escherichia coli KTE150]
gi|431660807|gb|ELJ27670.1| methyltransferase [Escherichia coli KTE168]
gi|431705232|gb|ELJ69830.1| methyltransferase [Escherichia coli KTE88]
gi|431729993|gb|ELJ93612.1| methyltransferase [Escherichia coli KTE97]
gi|431734517|gb|ELJ97918.1| methyltransferase [Escherichia coli KTE99]
Length = 345
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHD-KQFQLISVTAEKWVPIVEVPVNSIKHFLERKK 1777
NL G+ R+C F G+ + DA +L + AE PI ++I + L+ +
Sbjct: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDDFR 266
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
G++V+ + PL + P K VLVLG+E EG+P D ++I G V
Sbjct: 267 QAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325
Query: 1838 LNVHVSGAIALWEYTRQQR 1856
LN+ V+ + L E+ RQ +
Sbjct: 326 LNISVATGVLLGEWWRQNK 344
>gi|257146495|emb|CAX30784.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Conomelus anceps]
gi|257146515|emb|CAX30799.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Delphacidae sp.]
Length = 239
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 51/89 (57%)
Query: 1768 SIKHFLERKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACI 1827
SI++ + K G +L T +I Q + + T ++LG+E+ GI + + D I
Sbjct: 78 SIENAISTCKAAGMQILAAHLTNQAIDFRQIDYNQPTCIILGQERAGISKQALALADHNI 137
Query: 1828 EIPQLGVVRSLNVHVSGAIALWEYTRQQR 1856
IP +G+V+SLNV V+ A+ L+E RQ++
Sbjct: 138 HIPMMGMVQSLNVSVASALILYEAQRQRQ 166
>gi|182684414|ref|YP_001836161.1| spoU rRNA methylase family protein [Streptococcus pneumoniae CGSP14]
gi|182629748|gb|ACB90696.1| spoU rRNA methylase family protein [Streptococcus pneumoniae CGSP14]
Length = 253
Score = 57.4 bits (137), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVT-AEKWVPIVEVPVNSIKHFLERKK 1777
NL + RT + SG+ I + + T A + VPI V ++ L++ K
Sbjct: 119 NLGSILRTADATNVSGVIIPKHRTVGVTPVVAKTATGAIEHVPIARV--TNLSQTLDKLK 176
Query: 1778 HEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGVVRS 1837
EGF G + N P ++ K L++G E +GI +I +D I IP G V+S
Sbjct: 177 DEGFWTFGTDM--NGTPCHKWNTKGKIALIIGNEGKGISSNIKKQVDEMITIPMNGHVQS 234
Query: 1838 LNVHVSGAIALWEYTRQQ 1855
LN V+ AI ++E R +
Sbjct: 235 LNASVAAAILMYEVFRNR 252
>gi|421277653|ref|ZP_15728471.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
mitis SPAR10]
gi|395874384|gb|EJG85468.1| tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus
mitis SPAR10]
Length = 242
Score = 57.4 bits (137), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VP---VNSIKHFLE 1774
NL + RT + SG+ I + + V A+ +E VP V ++ L+
Sbjct: 108 NLGSILRTADATNVSGVIIPK-----HRAVGVTPVVAKTATGAIEHVPIARVTNLSQTLD 162
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ K EGF G + N P ++ K L++G E +GI +I +D I IP G
Sbjct: 163 KLKEEGFWTFGTDM--NGTPCHKWNTSGKVALIIGNEGKGISSNIKKQVDEMITIPMNGH 220
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ AI ++E R +
Sbjct: 221 VQSLNASVAAAILMYEVFRNR 241
>gi|322388153|ref|ZP_08061757.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
infantis ATCC 700779]
gi|417936528|ref|ZP_12579839.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus infantis
X]
gi|419842940|ref|ZP_14366270.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus infantis
ATCC 700779]
gi|321140825|gb|EFX36326.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Streptococcus
infantis ATCC 700779]
gi|343400677|gb|EGV13190.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus infantis
X]
gi|385703368|gb|EIG40488.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus infantis
ATCC 700779]
Length = 242
Score = 57.4 bits (137), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 1719 NLAGLARTCEVFKASGLAIADANILHDKQFQLISVTAEKWVPIVE-VP---VNSIKHFLE 1774
NL + RT + SG+ I + + V A+ +E VP V ++ L+
Sbjct: 108 NLGSILRTADATNVSGVIIPK-----HRAVGVTPVVAKTATGAIEHVPIARVTNLSQTLD 162
Query: 1775 RKKHEGFSVLGLEQTANSIPLDQYMFPKKTVLVLGREKEGIPVDIIHMLDACIEIPQLGV 1834
+ K EGF G + N P ++ K L++G E +GI +I +D I IP G
Sbjct: 163 KLKEEGFWTFGTDM--NGTPCHKWNTSGKVALIIGNEGKGISSNIKKQVDEMITIPMNGH 220
Query: 1835 VRSLNVHVSGAIALWEYTRQQ 1855
V+SLN V+ AI ++E R +
Sbjct: 221 VQSLNASVAAAILMYEVFRNR 241
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,878,782,566
Number of Sequences: 23463169
Number of extensions: 1149997708
Number of successful extensions: 2557068
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 2638
Number of HSP's that attempted gapping in prelim test: 2551792
Number of HSP's gapped (non-prelim): 6647
length of query: 1857
length of database: 8,064,228,071
effective HSP length: 158
effective length of query: 1699
effective length of database: 8,652,014,665
effective search space: 14699772915835
effective search space used: 14699772915835
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 85 (37.4 bits)