BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000210
(1854 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFF9|APC1_ARATH Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana GN=APC1
PE=2 SV=1
Length = 1678
Score = 2031 bits (5263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1076/1809 (59%), Positives = 1295/1809 (71%), Gaps = 159/1809 (8%)
Query: 1 MSVGVRRLSVLGEFKPFGLIAEALDGKPPDNLADKYDYFLFDPKFVRERAEADNNGGCSI 60
M GVR+L+VLG+FKPFGLIAEA DGK PD D Y YFLFDP+ ER +AD N
Sbjct: 1 MPPGVRQLTVLGKFKPFGLIAEATDGKSPD---DSYQYFLFDPELTGERDDADGND---- 53
Query: 61 SAPSNCSDHELFIRGNRIIWTTGARVFKRFTLPSQVITVCWCHIGDISEALLCVLQIESL 120
+ S +HELFIR N + A V F CW ++G +EA LCVLQI L
Sbjct: 54 ANFSRQREHELFIRDNCNVRKGYALVEANFI--GYWYNACWSNLGRGTEAFLCVLQIACL 111
Query: 121 TIYNTSGEVISIPLPRTITSIWPLPFGLLL-QSIEGNFPAHAPFPSSSRLLGARDIPRPR 179
TIYNTSGEV+S+PL RT+ SIWPLP GLLL Q+ E N P+H PF S +LG+R++ R R
Sbjct: 112 TIYNTSGEVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLRQR 171
Query: 180 REIGHSPQNNYSLPSSFNHNIKGETVSMSSHLILSDLLEEPQCTYIEERGKLNIMRDFDE 239
+E+G+S N+ P + + K + MSSHLIL D LEEP TY+EERGKL IM+D+DE
Sbjct: 172 KEVGNSSPQNFHSPVAHDLISKRDMPCMSSHLILRDPLEEPGPTYVEERGKLTIMKDYDE 231
Query: 240 RTIWTSDQIPLMASYNKGKMQHSVWVAEVVNCIPEVASASLSDVVPAGVLPKQFLFRRIW 299
RTIWTSD++PLM SYNKGKMQHSVW AE + E +++ S +VP VL K+ FRRIW
Sbjct: 232 RTIWTSDRLPLMTSYNKGKMQHSVWAAEFIESNLEASASCSSGIVPDAVLSKRVSFRRIW 291
Query: 300 QGKGAQTSASKVFLATDDDAAPIICLLLQEQKKLLALRLQSVEINNEILFDIKPDMSWSI 359
Q KGA+ +ASKVFLATD+ + P+IC L+ EQKKLL++ LQ+VEINNEILFD+KPD+SWS+
Sbjct: 292 QAKGAKKAASKVFLATDN-SVPVICFLILEQKKLLSVGLQTVEINNEILFDVKPDISWSV 350
Query: 360 PAVAAAPVIVTRPRVKVGLLQYTDIVVLAPDNALLLYSGKQCLCRYMLPSSLRKGNLSRS 419
A+AAAPV+VTR +VK+GLL + DI+VL+P+N L LYSGKQCLCRY+LPS L + S
Sbjct: 351 SAIAAAPVVVTRSQVKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESIGSGD 410
Query: 420 LEFSEAASVSHDLKIIGLADAVEGRINVMVNTGQIFRCELRQNPSSSLTNDCITAMAEGL 479
E ++ S +LKI GL+DAV G IN+ VN QIFRC L PSSSL NDCI A+AEGL
Sbjct: 411 GESAKTDSGFRNLKITGLSDAVLGSINLSVNHSQIFRCALTGKPSSSLANDCIAAIAEGL 470
Query: 480 SSNFYNYFLVLLWGDNNSTYLSEASSDVDSEWNSFCSIIMQMGQKPSLISKQHLNSAPDS 539
S+ Y+ FL LLWGD +S S + EW + C+I +++ QKP+++ ++ +A +S
Sbjct: 471 RSDLYSLFLSLLWGDGHSDL---QGSSIHFEWEALCNIFLEICQKPTVVHRKQPKTASES 527
Query: 540 SWEFLLNSDFHKNYCKF-NFIAGISGTKPAVLVPNSSR---KEVDGSLILNDSFYSELFM 595
SWEFLL S FHK Y +F N I I+ +VP S+ +E GS EL +
Sbjct: 528 SWEFLLISKFHKTYSRFHNGITSINRLDLEGIVPFDSKICSEETLGS-------SCELMV 580
Query: 596 VSLDALHSLYESLKLDTLRKRDLELLAVLLCNVAKFLGEEYYLDHYIRDFPCLSKKFGMS 655
SLD LH++YESLK+D LRK+DL LAVLLCN+AKFL E+ YLD+YIRDFP LS G
Sbjct: 581 QSLDCLHAVYESLKMDNLRKQDLHHLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGAC 640
Query: 656 MDSVSQKNPPSLFKWLENCLEYGYNYANVNDLPPLIRKDESSVVSWARKVVSFYSLLLGA 715
S + PP+LF+WLENCL G N +DLP LIR+D S+VSWARKVVSFYS+L G
Sbjct: 641 TTLSSSRKPPNLFRWLENCLRRGCLSTNFDDLPDLIRRDGCSIVSWARKVVSFYSVLFGD 700
Query: 716 KPIGKKLPSGVFCNIAPGSFCSNEELTVLAMVGENFGLQQLDLLPCGVSLPLRHALDKCR 775
KP G+ L SGV CNIAPGS+ NEELT+LAM GE FGL QLDLLP GVSLPLRHALD CR
Sbjct: 701 KPEGRTLSSGVPCNIAPGSYSCNEELTILAMAGERFGLHQLDLLPSGVSLPLRHALDSCR 760
Query: 776 ESPPTDWPAAAYILLGREDLASSCLANTCKSKELETQTNVNLISMSTPYMLHLHPVTVPS 835
ESPP DWPA AY+LLGRED+A S N SKE E Q+N +LISMS PYMLHLHPV VPS
Sbjct: 761 ESPPADWPAIAYVLLGREDMALSVFRNFSSSKEFEMQSNTSLISMSIPYMLHLHPVIVPS 820
Query: 836 IVSDTSGLDSTKFEDTDSVDGSMTDGMEHIFASGTQLRYGRDLRLNEVRRVLCSARPVAI 895
S++ GL++TK EDT+SVDGS+ DGMEHIF S TQLRYGRDLRLNEVRR+LCSARPV +
Sbjct: 821 --SESIGLENTKIEDTNSVDGSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVV 878
Query: 896 QTSVSPSATDQDLQQAQLWHLAQRTTALPLGRGAFTLATINTLLTEAFTVPKLVLAGRLP 955
QT+ +P+ +DQ+ QQ AFTVPKLVLAGRLP
Sbjct: 879 QTAANPTISDQEQQQ-------------------------------AFTVPKLVLAGRLP 907
Query: 956 AQQNATVNLDPNIRNIQELKSWPEFHNAVAAGLRLSPIQGKMSRTWIMYNKPEEPNITHA 1015
+QQNA VNLDPNIRNIQELK+WPEFHNAVAAGLRL+P+QGK+SRTWI YNKP EPN HA
Sbjct: 908 SQQNAIVNLDPNIRNIQELKTWPEFHNAVAAGLRLAPLQGKVSRTWIRYNKPGEPNAVHA 967
Query: 1016 GLLLALGLHGHLRALTISDIYKYFYQEHESTAVGLMLGLAASYRGTMQPVISKSLYVHIP 1075
GLL LGL G+L L +SDIY+YF Q+HEST VGLMLGLAASYRGTMQP I+K+L+ H+P
Sbjct: 968 GLLFGLGLQGYLHVLNLSDIYQYFTQDHESTTVGLMLGLAASYRGTMQPDIAKALFFHVP 1027
Query: 1076 ARHPSS-VELEVPTILQSAALMSVGLLYEGSAHPQTMQILLGEIGRRSGGDNVLEREGHA 1134
AR+ +S E E+PT+LQSAAL+SVG+L+EGSAH QTMQ+LLGEIGRRS GDNVLEREG+A
Sbjct: 1028 ARYQASYTEFEIPTLLQSAALVSVGMLFEGSAHQQTMQLLLGEIGRRSAGDNVLEREGYA 1087
Query: 1135 VSAGFALGLVALGRGEDALGFTDTLVGRLFHYIGGKEVHNERSHFLSLSADENNRCAGQM 1194
VSAGF+LGLVALGRG DALG D+LV RL Y+G KE ERS + + + E++R A Q+
Sbjct: 1088 VSAGFSLGLVALGRGGDALGSMDSLVNRLLLYLGAKE---ERS--ILVPSLEDHRSAAQI 1142
Query: 1195 MDGTMVNVDVTAPGAIIALSLMFLKTESEAIVSRLSIPNTHFDLQYVRPDFIMLRVIARN 1254
DG+ NVD+TAPGAIIAL+LM+LKTESE I S+LSIP TH+DL+ VRPDFIMLRVIARN
Sbjct: 1143 TDGSTSNVDITAPGAIIALTLMYLKTESEVIFSKLSIPQTHYDLECVRPDFIMLRVIARN 1202
Query: 1255 LIMWSRVYPSDDWIQSQIPEIVKSNVEALRDDTSDVDEMDAETFVQAYVNIVAGACISLG 1314
LIMWSR+ P+ DWIQSQ+PE+VK+ + LRDD ++ E+D E VQAYVNIVAGACISLG
Sbjct: 1203 LIMWSRICPTCDWIQSQVPEVVKNGISQLRDDMDNMYEVDVEALVQAYVNIVAGACISLG 1262
Query: 1315 LRFAGTKNANVQELLYGYAVYFLNEIKPVFATRGNAFPKGLSRYVDRCTLEICLHLVVLS 1374
LRFAGT++ N ++LL YA+Y LNEIKP+ AT GNAFP+G+S++VDR TLE+CL+L+++S
Sbjct: 1263 LRFAGTRDGNARDLLNSYALYLLNEIKPLSATPGNAFPRGISKFVDRGTLEMCLYLIIIS 1322
Query: 1375 LSVVMAGSGHLQTFRLLRFLRGRNSADGHASYGIQMAVSLAIGFLFLGGGMRTFSTNNNS 1434
LSVVMAGSG LQ FRLLRFLR RNSADGHA+YG QMAVSLA GFLFLGGGMRTFSTNN S
Sbjct: 1323 LSVVMAGSGDLQVFRLLRFLRSRNSADGHANYGTQMAVSLATGFLFLGGGMRTFSTNNGS 1382
Query: 1435 IAALFISLYPRLPSGPNDNRCHLQAFRHLYVLATEARWIQTVDVDTGLPVYAPFEVTVRE 1494
+A L I+LYPRLPSGPNDNRCHLQAFRHLYVLATEARW+QT+DVD+GLPVYAP EVTV+E
Sbjct: 1383 LAMLLITLYPRLPSGPNDNRCHLQAFRHLYVLATEARWLQTIDVDSGLPVYAPLEVTVKE 1442
Query: 1495 TEHYSETSYCEVTPCILPERAILKRVCVCGPRYWPQVIELVPEDKPWWSYGDKNDPFNSG 1554
T+ YSET +CE+TPCILPERAILKR+CVCGPRYWPQ IELV
Sbjct: 1443 TKLYSETKFCEITPCILPERAILKRICVCGPRYWPQQIELV------------------- 1483
Query: 1555 VLYIKRKIGACSYVDDPVGCQSLLSRAMHKVFSLTSDPSTNDKSGLGSVAVDQLVSTFSS 1614
+ R +G + + N L S +VD LVSTFSS
Sbjct: 1484 --FGLRTLGESNLI-------------------------ANSHRELDSDSVDHLVSTFSS 1516
Query: 1615 DPSLIAFAQLCCDPSWNSRSDGDFQEFCLQVLFECISKDRPALLQVYLSLHTMIGSMVDQ 1674
DPSLIAFAQLCCD SWN+ D +L L ++ S V
Sbjct: 1517 DPSLIAFAQLCCDKSWNNSFD-------------------------FLILDLILWSQV-- 1549
Query: 1675 VINGHVVVGDSLNISNLKLALAYIDAQLSGKLTTSKGGIVQSKFMGSVRKRVEELLNCSN 1734
ALAY +A +G+L +S GG VQS F+ S+RKR EE+LNCS
Sbjct: 1550 -------------------ALAYNEAVSTGRLASS-GGFVQSIFLASLRKRCEEVLNCST 1589
Query: 1735 GLQNHFSNYLTSGKWP-DDESQGDKNSILLSWYLKWFRVPPPSVIKTAAEKIKPKLV-SS 1792
L+ + NYLTS WP D S+ K+ I+LSWYLKWF VP PS+IK A EKIK K S+
Sbjct: 1590 ELKINLRNYLTSEAWPYDKNSKLQKDIIILSWYLKWFNVPSPSIIKAAVEKIKSKSKNST 1649
Query: 1793 SLVPFLRLF 1801
S +P LRL
Sbjct: 1650 SAIPLLRLL 1658
>sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1
SV=1
Length = 1944
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/1637 (30%), Positives = 801/1637 (48%), Gaps = 222/1637 (13%)
Query: 251 MASYNKGKMQHSVWVAEVVNCIPEVASASLSDVVPAGVLPKQFLFRRIWQGKGAQTSASK 310
++S+N+ +HS+ + N + +VP + I + + ASK
Sbjct: 371 ISSHNQSPKRHSISHSPNSNSNGSFLAPETEPIVPELCI-DHLWTETITNIREKNSQASK 429
Query: 311 VFLATDDDAAPIICLLLQEQKKLLALRLQSVEINNEILFDIKPDMSWSIPAVAAAPVIVT 370
VF+ +D +C L++ Q +L ++ Q +++F + IPA AAPV
Sbjct: 430 VFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTN----IPAKDAAPV--- 482
Query: 371 RPRVKVGLLQYTDIVVLAPDNALLLYSGKQCLCRYMLPS----SLRKGN----------- 415
+ ++VL L+LY+G + + +P SL N
Sbjct: 483 --------EKIDTMLVLEGSGNLVLYTGVVRVGKVFIPGLPAPSLTMSNTMPRPSTPLDG 534
Query: 416 -------------------LSRSLEFSEAASVSHDLK------------IIGLADAVEGR 444
LS E +++ + L I + D V R
Sbjct: 535 VSTPKPLSKLLGSLDEVVLLSPVPELRDSSKLHDSLYNEDCTFQQLGTYIHSIRDPVHNR 594
Query: 445 INVMVNTGQIFRCELRQNPSSSLTNDCITAMAEGLSSNFYNYFLVLLWGDNNSTYLSEAS 504
+ + ++ G + R + + +S L C+ A+ L LV W + +S +
Sbjct: 595 VTLELSNGSMVRITIPEIATSELVQTCLQAIKFILPKEIAVQMLVK-WYNVHS---APGG 650
Query: 505 SDVDSEWNSFCSIIMQM-----------------GQKPSLISKQHL---NSAPDSSWEFL 544
SEWN F + +M M G +I+ + + D WE+L
Sbjct: 651 PSYHSEWNLFVTCLMNMMGYNTDRLAWTRNFDFEGSLSPVIAPKKARPSETGSDDDWEYL 710
Query: 545 LNSDFHKNYCKFNFIAGISGTKPAVLVPNSSRKEVDGSLILNDSFYSELFMVS-----LD 599
LNSD+H+N + + L P+ + + D N S S + +
Sbjct: 711 LNSDYHQN------VESHLLNRSLCLSPSEASQMKDEDFSQNLSLDSSTLLFTHIPAIFF 764
Query: 600 ALHSLYESLKLDTLRKRDLELLAVLLCNVAKFLGEEYYLDHYIRDFPCLSKKFG------ 653
LH +YE LKL+TL + L LL +A+ L Y+DHY RD+P L + G
Sbjct: 765 VLHLVYEELKLNTLMGEGICSLVELLVQLARDLKLGPYVDHYYRDYPTLVRTTGQVCTID 824
Query: 654 ------MSMDSVSQKNPPSLFKWLENCLEYGYNYANVNDLPPLIRKDESSVVSWARKVVS 707
M S PPS+++W+ +CL+ G LP + + V+S A ++
Sbjct: 825 PGQTGFMHHPSFFTSEPPSIYQWVSSCLK-GEGMPPYPYLPGICERSRLVVLSIALYILG 883
Query: 708 FYSLL------------LGAKPIGKKLPSGVFCNIAPGSFCSNEELTVLAMVGENFGLQQ 755
SL+ + + + + F S S E V+ M F L+
Sbjct: 884 DESLVSDESSQYLTRITIAPQKLQVEQEENRFSFRHSTSVSSLAERLVVWMTNVGFTLRD 943
Query: 756 LDLLPCGVSLPLRHALDKCRESPPTDWPAAAYILLGREDLA-SSCLANTCKSKELETQTN 814
L+ LP G++LP+R A+ CRE P +DWP A +L+GR+DL+ +C N K K +
Sbjct: 944 LETLPFGIALPIRDAIYHCREQPASDWPEAVCLLIGRQDLSKQACEGNLPKGKSV----- 998
Query: 815 VNLISMSTPYMLHLHPVTVPSIVSDTSGLDSTKFEDTDSVDGSMTDGMEHIFASGTQLRY 874
+ SD T+ ED DGM + L +
Sbjct: 999 ---------------------LSSDVPSGTETEEED---------DGMNDMNHEVMSLIW 1028
Query: 875 GRDLRLNEVRRVLCSARPVAIQTSVSPSATDQDL---QQAQLWHLAQRTTALPLGRGAFT 931
DLR+ +VRR+L SA PV + P +D + ++ +L L QRT ALP+GRG FT
Sbjct: 1029 SEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFT 1088
Query: 932 LATINTLLTEAFTVPKLVLAGRLPAQQNATVNLDP-NIRNIQELKSWPEFHNAVAAGLRL 990
L + + + TE +PKL L GR P +N TV+L+ NI + SW FHN VAAGL++
Sbjct: 1089 LFSYHPVPTEPLPIPKLNLTGRAPP-RNTTVDLNSGNIDVPPNMTSWASFHNGVAAGLKI 1147
Query: 991 SPIQGKMSRTWIMYNKPEEPNIT--HAGLLLALGLHGHLRALTISDIYKYFYQEHESTAV 1048
+P ++ WI+YNKP+ + +AG L+ALGL+GHL L +I+ Y + HE T++
Sbjct: 1148 AP-ASQIDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSI 1206
Query: 1049 GLMLGLAASYRGTMQPVISKSLYVHIPA-RHPSSVELEVPTILQSAALMSVGLLYEGSAH 1107
GL+LG++A+ GTM I++ L +HIPA P+S EL+VP +Q AA++ +GL+Y+G+AH
Sbjct: 1207 GLLLGVSAAKLGTMDMSITRLLSIHIPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAH 1266
Query: 1108 PQTMQILLGEIGRRSGG--DNVLEREGHAVSAGFALGLVALGRGEDALGFTDTLV-GRLF 1164
T ++LL EIGR G + +RE ++++AG ALG+V LG G + +G +D V +L+
Sbjct: 1267 RHTAEVLLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLY 1326
Query: 1165 HYIGGKEVHNERSHFLSLSADENNRCAGQMMDGTMVNVDVTAPGAIIALSLMFLKTESEA 1224
Y+ G R + +++ + Q+ +G +NVDVT PGA +AL++++LKT + +
Sbjct: 1327 QYMVG----GHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRS 1382
Query: 1225 IVSRLSIPNTHFDLQYVRPDFIMLRVIARNLIMWSRVYPSDDWIQSQIPEIVKSNVEALR 1284
I L P+T + L +V+P+F++LR +AR LI+W + P+ W+ S +P+I++ N +L
Sbjct: 1383 IADWLRAPDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLS 1442
Query: 1285 D-DTSDVDEMDAETFVQAYVNIVAGACISLGLRFAGTKNANVQELLYGYAVYFLNEIKPV 1343
+ + ++++ ET QA+V I+AGAC+SLG RFAG++N + L+ +A F+
Sbjct: 1443 EIELPCSEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFNCLHKFAKDFM-----T 1497
Query: 1344 FATRGNAFPKGLSRYVDRCTLEICLHLVVLSLSVVMAGSGHLQTFRLLRFLRGRNSADGH 1403
+ + NA G LE CL +V+LSL++VMAGSG+L+ +L RFL + G
Sbjct: 1498 YLSAPNASVTGPH------NLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTG--GE 1549
Query: 1404 ASYGIQMAVSLAIGFLFLGGGMRTFSTNNNSIAALFISLYPRLPSGPNDNRCHLQAFRHL 1463
+YG +A +A+G LFLGGG + ST+N+SIAAL +LYP P+ DNR HLQA RHL
Sbjct: 1550 MNYGFHLAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHL 1609
Query: 1464 YVLATEARWIQTVDVDTGLPVYAPFEVTVRETEHYSETSYCEVTPCILPERAILKRVCVC 1523
YVLA E R + VDVDT P YA EVT + T+ Y +T + P +LPE +LK++ V
Sbjct: 1610 YVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVK 1669
Query: 1524 GPRYWPQVIELVPEDKPWWSYGDKNDPFNSGVLYIKRKIGACSYVDDPVGCQSLLSRAMH 1583
GPRYW +I+L + S K+ GVLY+K + G SY +DP+G QSLL++
Sbjct: 1670 GPRYWELLIDLSKGTQHLKSILSKD-----GVLYVKLRAGQLSYKEDPMGWQSLLAQ--- 1721
Query: 1584 KVFSLTSDPSTNDKSGLGSVAVDQLVSTFSSDPSLIAFAQLCCDPSWNSRSDGDFQEFCL 1643
+ +++ + +S F+SDP+L++FA+ C P+ N + +
Sbjct: 1722 ---------TVANRNSEARAFKPETISAFTSDPALLSFAEYFCKPTVNMGQKQEILDLFS 1772
Query: 1644 QVLFECISKDRPALLQVYLSLHTMIGSMVDQVIN--GHVVVGDSLNISNLKLALAYIDA- 1700
VL+EC++++ P +L Y+++ DQ I G + ++ + +KL L + +
Sbjct: 1773 SVLYECVTQETPEMLPAYIAM--------DQAIRRLGRREMSETSELWQIKLVLEFFSSR 1824
Query: 1701 --QLSGKLTTSKGGIVQSKFMGSVRKRVEELLNCSNGLQNHFSNYLTSGKWPDDESQGDK 1758
Q + +G + S+F+ V+ ++ L+ + + P +ESQ
Sbjct: 1825 SHQERLQNHPKRGLFMNSEFLPVVKCTIDNTLDQWLQVGGDMCVHAYLSGQPLEESQLS- 1883
Query: 1759 NSILLSWYLKWFRVPPP 1775
+L+ +L + VP P
Sbjct: 1884 ---MLACFLVYHSVPAP 1897
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 68 DHELFIRGNRIIWTTGAR-----VFKRFTLPSQVITVCWC------------HIGDISEA 110
D EL++ GN +IW+ G++ V+K FT+ S V WC + + E
Sbjct: 90 DEELYVAGNMVIWSKGSKSQALAVYKAFTVDSPVQQALWCDFIISQDKSEKAYSSNEVEK 149
Query: 111 LLCVLQIESLTIYNTSGEVISIPLPRTITSIWPLPFGLLLQSIEGNFPAHAPFPSSSR 168
+C+LQ + +++ G+ LP + ++WP +GLL E + +H P S R
Sbjct: 150 CICILQSSCINMHSIEGKDYIASLPFQVANVWPTKYGLLF---ERSASSHEVPPGSPR 204
>sp|P53995|APC1_MOUSE Anaphase-promoting complex subunit 1 OS=Mus musculus GN=Anapc1 PE=1
SV=2
Length = 1944
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/1571 (30%), Positives = 789/1571 (50%), Gaps = 199/1571 (12%)
Query: 306 TSASKVFLATDDDAAPIICLLLQEQKKLLALRLQSVEINNEILFDIKPDMSWSIPAVAAA 365
+ ASKVF+ TD +C L++ Q +L ++ Q +++F + I A AA
Sbjct: 425 SQASKVFITTDLCGQKFLCFLVEAQLQLRCVKFQESNDKTQLIFGSVTN----IHAKDAA 480
Query: 366 PVIVTRPRVKV----GLLQYTDIVVLA--------------------PDNAL-------- 393
PV + + L+ YT +V + P L
Sbjct: 481 PVEKIHTMLVLEGNGNLVLYTGVVRVGKVFIPGLPAPSLTMSNMMPRPSTPLDGVGTPKP 540
Query: 394 ---LLYSGKQCLCRYMLPSSLRKGNLSRSLEFSEAASVSHDLKIIGLADAVEGRINVMVN 450
LL S + + +P L+ SL + I + D V R+ + ++
Sbjct: 541 LSKLLGSMDEVVLLSPVPELRDSSKLNDSLYNEDCTFQQLGTYIHSVRDPVHNRVTLELS 600
Query: 451 TGQIFRCELRQNPSSSLTNDCITAMAEGLSSNFYNYFLVLLWGDNNSTYLSEASSDVDSE 510
G + R + + +S L C+ A+ L LV W + +S + SE
Sbjct: 601 NGSMVRITIPEVATSELVQTCLQAIKFILPKEVAIQVLVK-WYNVHS---APGGPSCHSE 656
Query: 511 WNSFCSIIMQM-----------------GQKPSLISKQHL---NSAPDSSWEFLLNSDFH 550
W+ F ++ M G +I+ + ++ D WE+LLNS++H
Sbjct: 657 WSLFVICLLNMMGYNTDRLAWTRSFDFEGSLSPVIAPKKARPSDTGSDEDWEYLLNSEYH 716
Query: 551 KNYCKFNFIAGISGTKPAVLVPNSSRKEVDGSLILNDSFYSELFMVSLDA----LHSLYE 606
+N + T A+ V N+ ++ +L L+ S L + A LH +YE
Sbjct: 717 RNVESHLLNKSLCLT--ALEVSNAKDEDFSQNLSLDSS---TLLFAHIPAIFFVLHLVYE 771
Query: 607 SLKLDTLRKRDLELLAVLLCNVAKFLGEEYYLDHYIRDFPCLSKKFG------------M 654
LKL+TL + L LL +A+ L + YLDHY RD P L K G M
Sbjct: 772 ELKLNTLMGEGICSLIDLLVQLARDLKLDSYLDHYYRDSPTLVKTTGQVCTIDQGQMGFM 831
Query: 655 SMDSVSQKNPPSLFKWLENCLEYGYNYANVNDLPPLIRKDESSVVSWA-----------R 703
PPS+++W+ +CL+ G LP + + V+S A
Sbjct: 832 HHPPFFTSEPPSIYQWVSSCLK-GEGMPPYPYLPGICERSRLVVLSIALYTLGDESCVSD 890
Query: 704 KVVSFYSLLLGA--KPIGKKLPSGVFCNIAPGSFCSNEELTVLAMVGENFGLQQLDLLPC 761
+ + S + KP ++ F S E V+ M F L+ L+ LP
Sbjct: 891 ETCQYLSKVTSTPQKPQAEQ-EENRFTFRHSASVSVLAERLVVWMASVGFTLRDLETLPF 949
Query: 762 GVSLPLRHALDKCRESPPTDWPAAAYILLGREDLAS-SCLANTCKSKELETQTNVNLISM 820
G++LP+R A+ CRE P +DW A +L+GR+DL+ +C N + K +
Sbjct: 950 GIALPIRDAIYHCREQPDSDWSEAVCLLIGRQDLSKQACEGNLPRGKSV----------- 998
Query: 821 STPYMLHLHPVTVPSIVSDTSGLDSTKFEDTDSVDGSMTDGMEHIFASGTQLRYGRDLRL 880
+ S+ S T+ E+ D DGM + L + DLR+
Sbjct: 999 ---------------LSSEVSS--GTEAEEED-------DGMNDLNHEVMSLIWSEDLRV 1034
Query: 881 NEVRRVLCSARPVAIQTSVSPSATDQDL---QQAQLWHLAQRTTALPLGRGAFTLATINT 937
+VRR+L SA+PV + P +D + ++ +L L QRT ALP+GRG FTL + +
Sbjct: 1035 QDVRRLLQSAQPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFTLFSYHP 1094
Query: 938 LLTEAFTVPKLVLAGRLPAQQNATVNLDP-NIRNIQELKSWPEFHNAVAAGLRLSPIQGK 996
+ TE VPKL L GR P + N TV+L+ NI + SW FHN VAAGL+++P +
Sbjct: 1095 VPTEPLPVPKLNLTGRAPPR-NTTVDLNSGNIDVPPNMASWASFHNGVAAGLKIAP-ASQ 1152
Query: 997 MSRTWIMYNKPEEPNIT--HAGLLLALGLHGHLRALTISDIYKYFYQEHESTAVGLMLGL 1054
+ WI+YNKP+ + +AG L+ALGL+GHL L +I+ Y + HE T++GL+LG+
Sbjct: 1153 IDSAWIVYNKPKHAELANEYAGFLMALGLNGHLTKLATLNIHDYLTKGHEMTSIGLLLGV 1212
Query: 1055 AASYRGTMQPVISKSLYVHIPAR-HPSSVELEVPTILQSAALMSVGLLYEGSAHPQTMQI 1113
+A+ GTM I++ L +H+PA P+S EL+VP +Q AA++ +GL+Y+G+AH T ++
Sbjct: 1213 SAAKLGTMDMSITRLLSIHVPALLPPTSTELDVPHNVQVAAVVGIGLVYQGTAHRHTAEV 1272
Query: 1114 LLGEIGRRSGGD--NVLEREGHAVSAGFALGLVALGRGEDALGFTDTLV-GRLFHYIGGK 1170
LL EIGR G + +RE ++++AG ALG+V LG G + +G +D V +L+ Y+ G
Sbjct: 1273 LLAEIGRPPGPEMEYCTDRESYSLAAGLALGMVCLGHGSNLIGMSDLNVPEQLYQYMVG- 1331
Query: 1171 EVHNERSHFLSLSADENNRCAGQMMDGTMVNVDVTAPGAIIALSLMFLKTESEAIVSRLS 1230
R + +++ + Q+ +G +NVDVT PGA +AL++++LKT + +I L
Sbjct: 1332 ---GHRRFQTGMHREKHKSPSYQIKEGDTINVDVTCPGATLALAMIYLKTNNRSIADWLR 1388
Query: 1231 IPNTHFDLQYVRPDFIMLRVIARNLIMWSRVYPSDDWIQSQIPEIVKSNVEALRD-DTSD 1289
P+T + L +V+P+F++LR +AR LI+W + P+ W+ S +P+I++ N +L + +
Sbjct: 1389 APDTMYLLDFVKPEFLLLRTLARCLILWDDILPNSKWVDSNVPQIIRENSISLSEIELPC 1448
Query: 1290 VDEMDAETFVQAYVNIVAGACISLGLRFAGTKNANVQELLYGYAVYFLNEIKPVFATRGN 1349
++++ ET QA+V I+AGAC+SLG RFAG++N + L+ +A F+N + A+
Sbjct: 1449 SEDLNLETLSQAHVYIIAGACLSLGFRFAGSENLSAFSCLHKFAKDFMNYLSAPNASVTG 1508
Query: 1350 AFPKGLSRYVDRCTLEICLHLVVLSLSVVMAGSGHLQTFRLLRFLRGRNSADGHASYGIQ 1409
+ LE CL +V+LSL++VMAGSG+L+ +L RFL + G +YG
Sbjct: 1509 PY-----------NLETCLSVVLLSLAMVMAGSGNLKVLQLCRFLHMKTG--GEMNYGFH 1555
Query: 1410 MAVSLAIGFLFLGGGMRTFSTNNNSIAALFISLYPRLPSGPNDNRCHLQAFRHLYVLATE 1469
+A +A+G LFLGGG + ST+N+SIAAL +LYP P+ DNR HLQA RHLYVLA E
Sbjct: 1556 LAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAE 1615
Query: 1470 ARWIQTVDVDTGLPVYAPFEVTVRETEHYSETSYCEVTPCILPERAILKRVCVCGPRYWP 1529
R + VDVDT P YA EVT + T+ Y +T + P +LPE +LK++ V GPRYW
Sbjct: 1616 PRLLVPVDVDTNTPCYALIEVTYKGTQWYEQTKEELMAPTLLPELHLLKQMKVKGPRYWE 1675
Query: 1530 QVIELVPEDKPWWSYGDKNDPFNSGVLYIKRKIGACSYVDDPVGCQSLLSRAMHKVFSLT 1589
+I+L ++ S K+ GVLY+K + G SY +DP+G QSLL++
Sbjct: 1676 LLIDLSKGEQHLRSILSKD-----GVLYVKLRAGQLSYKEDPMGWQSLLAQ--------- 1721
Query: 1590 SDPSTNDKSGLGSVAVDQLVSTFSSDPSLIAFAQLCCDPSWNSRSDGDFQEFCLQVLFEC 1649
+ +++ + +S+F+SDP+L++FA+ C P+ + + + +L+EC
Sbjct: 1722 ---TVANRNSEARAFKPETISSFTSDPALLSFAEYFCKPTVSMGPKQEILDLFSSILYEC 1778
Query: 1650 ISKDRPALLQVYLSLHTMIGSMVDQVINGHVVVGDSLNISNLKLALAYIDA---QLSGKL 1706
++++ P +L Y+++ + S+ + ++ D+ ++ +KL L + + Q
Sbjct: 1779 VAQETPEMLPAYIAMDQALRSLKKRDMS------DTSDLWQIKLILEFFSSRSHQDRQHT 1832
Query: 1707 TTSKGGIVQSKFMGSVRKRVEELLN--CSNGLQNHFSNYLTSGKWPDDESQGDKNSILLS 1764
+G + S+F+ V+ V+ L+ G YL SG+ P ++SQ + +L+
Sbjct: 1833 YPKRGLFINSEFLPVVKCTVDATLDQWLQAGGDVCVHAYL-SGQ-PVEKSQLN----MLA 1886
Query: 1765 WYLKWFRVPPP 1775
+L + VP P
Sbjct: 1887 CFLVYHSVPAP 1897
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 68 DHELFIRGNRIIWTTGAR-----VFKRFTLPSQVITVCWCHI---GDISEAL-------- 111
D EL++ GN +IW+ G++ V+K FT+ S V WC D SE +
Sbjct: 90 DEELYVAGNMVIWSKGSKSQALAVYKAFTVDSTVQQALWCDFIISQDKSEKIYKSHELEK 149
Query: 112 -LCVLQIESLTIYNTSGEVISIPLPRTITSIWPLPFGLLLQ 151
+C+LQ + +++ G+ LP + ++W +GLL +
Sbjct: 150 CICILQSSCMNMHSIDGKDYIASLPFQVANVWATKYGLLFE 190
>sp|Q54NC6|APC1_DICDI Anaphase-promoting complex subunit 1 OS=Dictyostelium discoideum
GN=anapc1 PE=3 SV=1
Length = 2269
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 326/1040 (31%), Positives = 524/1040 (50%), Gaps = 157/1040 (15%)
Query: 861 GMEHIFASGTQLRYGRDLRLNEVRRVLCSARPVAIQTSVSPSATDQDLQQAQLWHL---A 917
G + + T LR+ D R+ EV R+L + + I + +D D L
Sbjct: 1206 GQDEFYKRITYLRFDTDQRIQEVYRLLSFSNRIQINHTQENGVSDHDYLSQLQSKLLLSV 1265
Query: 918 QRTTALPLGRGAFTLATINTLLTEAFTVPKLVLAGRLPAQQNATVNLDPNIRNIQE-LKS 976
QR+ +LP+ G FT+ +I L TE +P ++L G + + ++LDP + +Q+ +
Sbjct: 1266 QRSISLPIACGMFTIRSIKPLPTETINIPPIILNGFVGGTK-TNISLDPTM--VQDNMMV 1322
Query: 977 WPEFHNAVAAGLRLSPIQGKMSRTWIMYNKPEEPNITHAGLLLALGLHGHLRALTISDIY 1036
WPEFHN VAAGL++S Q +++ TWI+YN+P++ N +++GLL+ALGL L +L + ++
Sbjct: 1323 WPEFHNGVAAGLKVSADQTEITNTWIIYNRPKQFNPSYSGLLMALGLQKRLSSLAFTKLF 1382
Query: 1037 KYFYQEHESTAVGLMLGLAASYRGTMQPVISKSLYVHIPARHPS-SVELEVPTILQSAAL 1095
+Y H+ T+VGL+LG++ + GTM I+K L VHI + HP S++L+VP+ +Q AAL
Sbjct: 1383 EYLASGHQLTSVGLLLGISCTKMGTMDMSIAKVLSVHIQSLHPPLSIDLDVPSYVQIAAL 1442
Query: 1096 MSVGLLYEGSAHPQTMQILLGEIGRRSGGDNVLEREGHAVSAGFALGLVALGRGEDALGF 1155
M +GLLY +++ + ++LL EIGR+ D L+R+ ++++AG ALGLV LG+G +
Sbjct: 1443 MGIGLLYCQTSNRRMTEVLLMEIGRKPINDKPLDRDSYSLTAGMALGLVNLGKGANEGSL 1502
Query: 1156 TDTLVG---RLFHYIGGKEVHNERSHFLSLSADENN------------------------ 1188
TD V R F I ++ + S F + S +
Sbjct: 1503 TDLHVEDRLRSFIGISKEDSFDHMSTFFNQSYSTPSISSNRNNNDLFNNGSNNNSSSNGG 1562
Query: 1189 -----------------------RCAGQMMDGTMVNVDVTAPGAIIALSLMFLKTESEAI 1225
+ + +++ + N+D+TAPGAIIALSL++LKT + I
Sbjct: 1563 GGGGGGNNNGNNSNNGNNGSSQFKKSNTILESSKPNIDLTAPGAIIALSLIYLKTNNLKI 1622
Query: 1226 VSRLSIPNTHFDLQYVRPDFIMLRVIARNLIMWSRVYPSDDWIQSQIPEIVKSNVEALRD 1285
+ LSIP+T F L Y+RPD ++LR++ RNLI+W + P WI +P +V+ NV R+
Sbjct: 1623 SNYLSIPDTTFGLNYIRPDLVLLRILGRNLILWDSIKPQFQWIIDSVPLVVRKNVTIDRN 1682
Query: 1286 DTSDVDE-----------------MDAETFVQAYVNIVAGACISLGLRFAGTKNANVQEL 1328
E D E+F+ + N++AGA S+GL++AG+ N N L
Sbjct: 1683 SEKVFQEHSNNNNNNNKSRSSSSLNDFESFILIFCNVIAGAAFSIGLKYAGSLNENAFSL 1742
Query: 1329 LYGYAVYFLNEIKPVFATRGNAFPKGLSRYVD---RCTLEICLHLVVLSLSVVMAGSGHL 1385
L F + V+ + K + D R T E CL++V LSLS+VMAGSG+L
Sbjct: 1743 LMDLIQLF--RKRQVYLNKCLLKKKKIEPTFDKVMRVTTETCLNVVALSLSLVMAGSGNL 1800
Query: 1386 QTFRLLRFLRGRNSADGHASYGIQMAVSLAIGFLFLGGGMRTFSTNNNSIAALFISLYPR 1445
+T ++LR LR R +YG MA+++AIGFLFLGGG T ST+N +IA+L SLYPR
Sbjct: 1801 ETLKILRMLRSR--IGNEITYGNHMAINMAIGFLFLGGGQYTLSTSNIAIASLVCSLYPR 1858
Query: 1446 LPSGPNDNRCHLQAFRHLYVLATEARWIQTVDVDTGLPVYAPFEVTVRETEHYSETSYCE 1505
P DN HLQAFRHLY LA + R + T DVDT P + P E+T+ + +
Sbjct: 1859 FPCSSTDNDYHLQAFRHLYFLAIDPRCLITRDVDTLAPCHVPIELTILNNDTMKLETKQL 1918
Query: 1506 VTPCILPERAILKRVCVCGPRYWPQVIELVPED--------------------------- 1538
VTPC++PE + ++ + + PRYW I D
Sbjct: 1919 VTPCLIPELSSIRSISIKSPRYWNIFINRGFVDGGVDININNNNNNNNNNNNNNNNNNNN 1978
Query: 1539 -------KPWWSYGDKNDPFNSGVLYIKRKIGACSYVDDPVGCQSLLSRAMHKVFSLTSD 1591
+ +KN N +++KRKIG Y +DP G R++ K F +
Sbjct: 1979 NNNNNNNNNNNNNNNKNILKNHPTIFLKRKIGHLPYTEDPEGF-----RSLSKSFPKSES 2033
Query: 1592 PSTNDKSGLGSVAVDQLVSTFSSDPSLIAFAQLCCDPSWNSRSDGDFQEFCLQVLFECIS 1651
S S ++ + +F SDP+L+AFA+ C + +F+ F +L+EC++
Sbjct: 2034 ISLYSSSKGFQKNKEEFLKSFISDPNLLAFAKHFC-----TNQSNEFEHFNTTILYECLT 2088
Query: 1652 KDRPALLQVYLSLHTMIGSMVDQVINGHVVVGDSLNISNLKLALAYIDA--------QLS 1703
+D P ++ + L L+ I + ++ N + + + NL++ + +
Sbjct: 2089 QDTPEVIPLLLLLND-IANNFEKYSNSNTTIV----LENLRIIFKFYSKWNNGYYLNNNN 2143
Query: 1704 GKLTTSKGGIVQSKFMGSVRKRVEELLNCSNGLQNHF----------SNYLTSGKWPDDE 1753
K + G ++ S F+ S+ +++E + HF SNYL +G+ P+
Sbjct: 2144 NKNNNNDGWLIHSTFLDSISTKIDE------HFEKHFLNEQSNKKLLSNYLLTGELPNSL 2197
Query: 1754 SQGDKNSILLSWYLKWFRVP 1773
S K + ++ ++ +P
Sbjct: 2198 STSIKRK--FASFISYYNLP 2215
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 153/366 (41%), Gaps = 88/366 (24%)
Query: 508 DSEWNSFCSIIMQMGQKPSLISK-------------QHLNSAP-DSSWEFLLNSDFHKNY 553
D EW SF +++ + +K SL+ + H+ + WEFLLNS++HKNY
Sbjct: 729 DKEWISFQILLISLLEK-SLLKRPTDADTNKKIKENNHIKKEENEDDWEFLLNSNYHKNY 787
Query: 554 CK-FNFIAGISGTKPAVLVPNSSRKEVDGSLI---------------------------- 584
K +F++ ++ + + + P+++ + +
Sbjct: 788 EKGLSFLSNLNISDSSKVYPSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 847
Query: 585 ----------LND-SFYSEL--FMVSLD----ALHSLYESLKLDTLRKRDLELLAVLLCN 627
+ND +F + L F+ S+D ALH YE K+ T + L+ L
Sbjct: 848 NNNCNIFIESINDFNFKTSLNSFIESIDDIIIALHHQYEEFKILTFNINYIYKLSKFLIQ 907
Query: 628 VAKFLGEEYYLDHYIRDFPCL-------SKKFGMSMDSVSQKNPPSLFKWLENCLEYGYN 680
++ L Y+D+Y RDF L K S+D S K L + + ++ YN
Sbjct: 908 LSLHLELFNYVDYYFRDFGDLIDFINQFKIKSKTSIDISSLKLQSLLNDDIFSIYKFVYN 967
Query: 681 YANVNDLPPLIR------KDESSVVS-----WARKVVSFYSLLLGAKPIGKKLPSGVFCN 729
N N+ + K E + ++ W K+ S YS I K+ N
Sbjct: 968 SFNENNSETQQQQQFNKEKFERNKLTKYHFKWIYKMKSLYS-------IQSKINDNNSNN 1020
Query: 730 IAPGSFCSNEELTVLAMVGENFGLQQLDLLPCGVSLPLRHALDKCRESPPTDWPAAAYIL 789
+ S E ++ MV + L+ L+ + G+SLPLR ++ CR +PP DWP AY L
Sbjct: 1021 KNNIKYIS--EKLIMKMVELDIKLEDLNSISFGLSLPLRESIKYCRSNPPIDWPLKAYSL 1078
Query: 790 LGREDL 795
+ RE+L
Sbjct: 1079 IEREEL 1084
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 41/144 (28%)
Query: 48 ERAEADNNGGCSISAPSNCSDHELFIRGNRIIWTTGARVFKRFTLP--------SQVITV 99
E E D G ++ S + +LF N ++W++ V K+FTLP ++
Sbjct: 70 ENDETDEKGMILVNN-SFFEEAQLFWYQNTVVWSSPFTVKKKFTLPLLLSSMIYPKINNA 128
Query: 100 CWCH---IGDISE-----------------------------ALLCVLQIESLTIYNTSG 127
W H + D+S+ LCVL + L IYN+ G
Sbjct: 129 IWSHFPFLKDLSKQQQEQQQQQHHQQSEYTTSSINNDIDDYYKYLCVLHNQGLNIYNSIG 188
Query: 128 EVISIPLPRTITSIWPLPFGLLLQ 151
I LP + +IW FGLLL+
Sbjct: 189 NSYQIVLPCKVINIWSSKFGLLLE 212
>sp|P24686|BIME_EMENI Negative regulator of mitosis OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimE PE=2
SV=2
Length = 2067
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 271/819 (33%), Positives = 419/819 (51%), Gaps = 88/819 (10%)
Query: 756 LDLLPCGVSLPLRHALDKCRESPPTDWPAAAYILLGREDLASSCLANTCKSKELETQTNV 815
++ P G+S PL A+ + + T W ++ L+ R+DL S ++T + NV
Sbjct: 1115 IETFPAGISTPLYEAIIESQTHASTSWSSSFLGLIDRDDLNISSQSSTTRPPP-PLSLNV 1173
Query: 816 NLISMSTPYMLHLHPVTVPSIVSDTSGLDSTKFEDTDSVDGSMTDGMEHIFASGTQLRYG 875
+ ++ + + + + +I S + ++ +F S T+L +
Sbjct: 1174 SHDAIRDYHQISNSTLDIDAINSFEASAEADRF-------------------SVTRLIFR 1214
Query: 876 RDLRLNEVRRVLCSARPVAIQTSVSPSATDQDLQQAQ---LWHLAQRTTALPLGRGAFTL 932
D R E R+L ++ A + P TD DL +AQ + + RT ++P GR
Sbjct: 1215 EDKRFIEAARLLNQSKAPAAECHPEPEWTDSDLLEAQKEVVQLVTLRTLSIPTGRAMLAF 1274
Query: 933 ATINTLLTEAFTVPKLVLAGRLPAQQNATVNLDPNIRNIQELKSWPEFHNAVAAGLRLSP 992
+ LLTE +P L + N T++ D +E W FHN V+ GL +S
Sbjct: 1275 SGRLPLLTEKLPIPSFSLQCVM-KPSNVTISAD-RASFHEEKICWAFFHNGVSTGLAISK 1332
Query: 993 IQGKMSRTWIMYNKPEEPNITHAGLLLALGLHGHLRALTISDIYKYFYQEHESTAVGLML 1052
+ +WI++NKP+E HAG LLALGL+GHLR+L +KY +H T++GL+L
Sbjct: 1333 NSKGIDTSWILFNKPQELTNRHAGFLLALGLNGHLRSLAKWVAFKYLTPKHTMTSIGLLL 1392
Query: 1053 GLAASYRGTMQPVISKSLYVHIPARHP-SSVELEVPTILQSAALMSVGLLYEGSAHPQTM 1111
GL+ASY GTM ++++ L VH+ P + EL + + Q+A +M +GLLY S H +
Sbjct: 1393 GLSASYLGTMDTLVTRLLSVHVTRMLPMGAAELNLSPLTQTAGIMGIGLLYCNSQHRRMS 1452
Query: 1112 QILLGEIGRR-----SGGDNVLEREGHAVSAGFALGLVALGRGEDALGFTDT-LVGRLFH 1165
+++L EI S ++ L EG+ ++AGFALG + LG+G+D G D +V RL
Sbjct: 1453 EVMLSEIENADQEEGSATNDYLRNEGYRLAAGFALGFINLGKGKDLKGMRDMHIVERLLA 1512
Query: 1166 Y-IGGKEVHNERSHFLSLSADENNRCAGQMMDGTMVNVDVTAPGAIIALSLMFLKTESEA 1224
+G K V + +H L D GA IAL+++F+KT E
Sbjct: 1513 VAVGTKNV--DLAHVL----------------------DRATAGATIALAIIFMKTNDET 1548
Query: 1225 IVSRLSIPNTHFDLQYVRPDFIMLRVIARNLIMWSRVYPSDDWIQSQIPEIVKSNVEALR 1284
+ ++ IP+T YVRPD +LR +AR++IMW R+ D+W +PE+ + R
Sbjct: 1549 LAQKVDIPDTTVRFDYVRPDLFLLRTLARHIIMWDRIQACDEWFIGSLPEVYRR-----R 1603
Query: 1285 DDTSDVDEMDAETFVQAYVNIVAGACISLGLRFAGTKNANVQELLYGYAVYFLNEIKPVF 1344
+ V + + + NI+AG C +LGLRFAG+ + V+++L Y F+ I +
Sbjct: 1604 YRLTGVRRLKSNDM--PFFNIIAGLCFALGLRFAGSPDPTVRDILLSYLDQFI-RISRLP 1660
Query: 1345 ATRGNAFPKGLSRYVDRCTLEICLHLVVLSLSVVMAGSGHLQTFRLLRFLRGRNSADGHA 1404
A +A + R ++ C +V LSL+ VMAG+G L FR LR L GR D
Sbjct: 1661 APNYDA-------RLARNSVRHCQDVVALSLAAVMAGTGDLALFRRLRSLHGR--VDPDT 1711
Query: 1405 SYGIQMAVSLAIGFLFLGGGMRTFSTNNNSIAALFISLYPRLPSGPNDNRCHLQAFRHLY 1464
YG MA +AIG LFLGGG T T+N ++A+L SLYP P+ DN CHLQAFRHL+
Sbjct: 1712 PYGSHMAAHMAIGMLFLGGGSYTLGTSNLAVASLICSLYPIFPTTVLDNECHLQAFRHLW 1771
Query: 1465 VLATEARWIQTVDVDTGLPVYAPFEVTVRETEHYSETSYCEVTPCILPERAILKRVCVCG 1524
VLA E R I D+D+ P+ P +TV +++ S T PC+LP+ + +V V
Sbjct: 1772 VLAAEPRCIVPRDLDSRRPISMP--ITVTDSDGVSGTL---TAPCLLPDLNRIAKVEVLS 1826
Query: 1525 PRYWPQVIEL--VPEDKPWWSYGDKNDPFNSGVLYIKRK 1561
P YWP V++ P + + GD++ +Y++RK
Sbjct: 1827 PDYWPLVLDFDSNPGVREKFQQGDQS-------IYLRRK 1858
>sp|Q9URV2|APC1_SCHPO Anaphase-promoting complex subunit 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cut4 PE=1 SV=1
Length = 1458
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 298/1019 (29%), Positives = 457/1019 (44%), Gaps = 143/1019 (14%)
Query: 530 KQHLNSAPDSSWEFLLNSDFHKNYCKFNFIAGISGTKPAVLVPNSSRKEVDGSLILNDSF 589
K H+ D + + L+S FH K +L+ + +D S +F
Sbjct: 420 KVHVEPIEDCNEAYSLSSKFH--------------FKKEILIASQLSSHLDYS-----TF 460
Query: 590 YSELFMVSLDALHSLYESLKLDTLRKRDLELLAVLLCNVAKFLGEEYYLDHYIRDFP--C 647
+ L +++ LH + E L+LD++ K + L LL + +L Y ++Y D
Sbjct: 461 KNYLMPLAI-TLHFISEELRLDSVVKPRKDQLVALLLQITTWLKWPRYCEYYNFDIAETF 519
Query: 648 LSKKFGMSMDSVSQKNPPSLFKWLENCLEYGYNYANVNDLPPLIRKDESSVVSWARKVVS 707
LS + +D P S+ +W+ CL + +S+V + +
Sbjct: 520 LSIPLSIQVDVEEPVGPTSILQWIIECL-----------------RSQSTVPFYGLESYG 562
Query: 708 FYSLLLGAKPIGKKLPSGVFCNIAPGSFCSNEELTVLAMVGENFGLQQLDLLPCGVSLPL 767
P L + C + P N V MV ++ + P G+ +
Sbjct: 563 LPHSCSTMFPQTLSLMQLLDCLLNPNMTLQN---LVEEMVRLGISRKRCERYPFGILCII 619
Query: 768 RHALDKCRESPPTDWPAAAYILLGREDLASSCLANTCKSKELETQTNVNLISMSTPYMLH 827
L+ E +W + L+ R D+ S T K + V I T
Sbjct: 620 FTVLEIAAEEYSPNWESEELRLVNRLDVDSFLHPKTPKWVFNKQDQEVKEIKALT----- 674
Query: 828 LHPVTVPSIVSDTSGLDSTKFEDTDSVDGSMTDGMEHIFASGTQLRYGRDLRLNEVRRVL 887
S V+D++ +D+ F H + T + + D RL EV ++L
Sbjct: 675 -------STVTDSTLVDTQSF---------------HPYKVVTDMIFREDRRLAEVNKLL 712
Query: 888 CSARPVAIQTS-VSPSATDQDLQQAQLWHLAQRTTALPLGRGAFTLATINTLLTEAFTVP 946
+ + I T + +QQ + RT ++P+G G T + N L TE T P
Sbjct: 713 NYSSQITIMTEHFDVDLSSVPMQQKVAQCICVRTLSVPIGAGMLTYGSKNPLPTEKVT-P 771
Query: 947 KLVLAGRLPAQQNATVNLDPNIRNIQ--------ELKSWPEFHNAVAAGLRLSPIQGKMS 998
+L N T++L P IQ EL WPEF+ VA GL +S +++
Sbjct: 772 RLF---------NFTLHLHPGTLIIQPNKEFVTQELTEWPEFNVGVALGLSISKFSKEIN 822
Query: 999 RTWIMYNKPEEPNITHAGLLLALGLHGHLRALTISDIYKYFYQEHESTAVGLMLGLAASY 1058
+WIM+N+PE HAG L LGL+GHL+AL + Y +H++T++GL+LGLA+SY
Sbjct: 823 TSWIMFNRPETLTAYHAGFLFGLGLNGHLKALATWHSFIYLTSKHDTTSIGLLLGLASSY 882
Query: 1059 RGTMQPVISKSLYVHIPARHP-SSVELEVPTILQSAALMSVGLLYEGSAHPQTMQILLGE 1117
G+M ++K L VHI A P S EL + + Q+A ++ +GLL+ S H + ++ + E
Sbjct: 883 LGSMDAKVTKLLSVHISALLPVGSNELNISPLTQTAGILGIGLLFHDSCHRRMSEVTMEE 942
Query: 1118 IGRRSGGDNVLEREGHAVSAGFALGLVALGRGEDALGFTD-TLVGRLFHYIGGKEVHNER 1176
I + ++ L+ EG+ ++AGF+LGL+ LGRG + G +D LV RL
Sbjct: 943 I--LASNESELKNEGYKLAAGFSLGLINLGRGSNLPGMSDLKLVSRL------------- 987
Query: 1177 SHFLSLSADENNRCAGQMMDGTMVNVDVTAPGAIIALSLMFLKTESEAIVSRLSIPNTHF 1236
G T +++ +PGAI+AL+++++KT + ++ IP + +
Sbjct: 988 -------------QVGISSQATFQSLEAGSPGAIMALTMIYMKTNDLEVAKKIDIPKSRY 1034
Query: 1237 DLQYVRPDFIMLRVIARNLIMWSRVYPSDDWIQSQIPEIVKSNVEALRDDTSDVDEMDAE 1296
L + RPD I+LRV +NLIMW V +W++ QIP+I+ S + D++
Sbjct: 1035 LLDFYRPDLILLRVAGKNLIMWDEVKADYEWVKYQIPDIMLSQFDLQEKKVLSSDDL--- 1091
Query: 1297 TFVQAYVNIVAGACISLGLRFAGTKNANVQELLYGYAVYFLNEIKPVFATRGNAFP-KGL 1355
N++AG C SLGLRFAGT N +E+L + F+ R P K
Sbjct: 1092 ----LLYNVLAGICFSLGLRFAGTGNPKAKEILINFLDSFI---------RLCHLPAKTH 1138
Query: 1356 SRYVDRCTLEICLHLVVLSLSVVMAGSGHLQTFRLLRFLRGRNSADGHASYGIQMAVSLA 1415
V T+ C +V LS S VMAG L R LR L GR +YG QMA +A
Sbjct: 1139 DERVTAVTVIRCTQIVALSSSCVMAGYCDLDVLRRLRVLHGRMEP---VNYGAQMATHMA 1195
Query: 1416 IGFLFLGGGMRTFSTNNNSIAALFISLYPRLPSGPNDNRCHLQAFRHLYVLATEARWIQT 1475
+G L LGGG + S +N +IAAL IS YP+ P DNR HLQA R+L+ LA E R I
Sbjct: 1196 LGILSLGGGRYSLSRSNLAIAALLISFYPQFPRTTQDNRAHLQAARNLWALAVEERCIIP 1255
Query: 1476 VDVDTGLPVYAPFEVTVRETEHYSETSYCEVTPCILPERAILKRVCVCGPRYWPQVIEL 1534
+ DT P P V + S P +LP + V G +YW I+L
Sbjct: 1256 RNQDTKQPCIVPLNVVQK-----SGAVQKLEAPILLPPYDSISSVSTLGDKYWNLKIDL 1309
>sp|P53886|APC1_YEAST Anaphase-promoting complex subunit 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC1 PE=1 SV=2
Length = 1748
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 208/851 (24%), Positives = 364/851 (42%), Gaps = 123/851 (14%)
Query: 600 ALHSLYESLKLDTLRKRDLELLAVLLCNVAKFLG-EEYYLDHYIRDFPCLSKKFGMSMDS 658
LH + E L+ L + + LL L +G + + +Y+ SK F +
Sbjct: 630 GLHLIREEYSLNVLCRNEHALLGQFLRFATAAMGWPDLWQSYYVPKMDSESKTFLHPREQ 689
Query: 659 VSQ-----KNPPSLFKWLENCLEYGYNYANVNDLPPLIRKDESSVVSWARKVVSFYSLLL 713
S PPS+ K L + E N PL +S++R V + + L
Sbjct: 690 NSTFFHPLDEPPSITKSLYSITE--------NSSIPL-----CPFISFSRLVATDTQVEL 736
Query: 714 GAKPIGKKLPSGVFCNIAPGSFCSNEELTVLAMVGENFGLQQLDLLPCGVSLPLRHAL-- 771
P K+ G++ + +F + L +L+ +L P G+ +PL++ L
Sbjct: 737 RITPRSFKI-LGLYELVHSPNFLPDYVLGILSSF--KVDKDELQTYPLGILVPLQNILKI 793
Query: 772 --DKCRESPPTDWPAAAYILLGREDLAS-SCLANTCKSKELETQTNVNLISMSTPYM--- 825
DK E LL R DL S + N+ +S E YM
Sbjct: 794 LEDKLSEVRDN------LELLDRADLQRCSAIINSIRSDSKEVLKR----GQRDSYMLCK 843
Query: 826 ---------LHLHPVTVPSIVS-----------DTSGLDSTKFEDTDSVDGSMTDGMEHI 865
L P + SI+S D S + + +D + +D +G
Sbjct: 844 VPLAKNRSSLSKKPSDIYSILSEIVKSASQVPLDGSAMRMSNIQDDEDID----EGRSLK 899
Query: 866 FASGTQLRYGRDLRLNEVRRVLCSARPVAIQTSVSPSATDQDLQQAQLWH--LAQRTTAL 923
+G L + D R V +L RP Q + + Q L Q + + +A RT
Sbjct: 900 LNAG--LIFSEDKRFTHVVSLLAYYRPTKTQFFTTKTEYAQILAQKKYFAKIMALRTCTN 957
Query: 924 PLGRGAFTLATINTLLTEAFTVPKLVLAGRLPAQQNATVNLDPNIRNIQELKSWPEFHNA 983
+G GA AT + T+ + + L L P TV +I ++ W +FH
Sbjct: 958 GVGWGAVAYATEKPISTQKWVIQPLNLISVFPDDTKITVKAPEDI--AHDIVEWGQFHAG 1015
Query: 984 VAAGLRLSPIQGKMSRTWIMYNKPEEPNITHAGLLLALGLHGHLRALTISDIYKYFYQEH 1043
V++GLR+S ++ +WI +NKP+E + H G LL LGL+GHL+ L IY Y +
Sbjct: 1016 VSSGLRISKKATGITGSWIAFNKPKELDAYHGGFLLGLGLNGHLKNLEEWHIYNYLSPRN 1075
Query: 1044 ESTAVGLMLGLAASYRGTMQPVISKSLYVHIPARHPS-SVELEVPTILQSAALMSVGLLY 1102
++GL+LG+++S +G+M + K + VH+ A PS S +L + LQ+A ++ +G+LY
Sbjct: 1076 THISIGLLLGMSSSMKGSMDSKLIKVISVHLVAFLPSGSSDLNIDLKLQTAGIIGMGMLY 1135
Query: 1103 EGSAHPQTMQILLGE-IGRRSGGDNVLEREGHAVSAGFALGLVALGRGEDALGFTDTLVG 1161
S H + + + + + D ++ E + ++AG +LGL+ LG G+ L D+ +
Sbjct: 1136 LNSRHKRMSDSIFAQLVSLLNVNDEMVADEEYRLAAGISLGLINLGAGQTKLRKWDSSLL 1195
Query: 1162 RLFHYIGGKEVHNERSHFLSLSADEN---NRCAGQMMDGTMVNVDV--------TAPGAI 1210
L G ++ + + S ++N ++++ DV + GA+
Sbjct: 1196 GL-----GDDLPEDV--YDSSDVEQNVMYEDLTTKLLEIVTSTYDVENDWIPENSQIGAV 1248
Query: 1211 IALSLMFLKTESEAIVSRLSIPNTHFDLQYV-------RPDFIMLRVIARNLIMWSRVYP 1263
IA+ +FLK+ + I + L + DL+ + RP+ +M R A N+I+W +
Sbjct: 1249 IAIMFLFLKSNNFGISNMLKV-----DLKEILKANINTRPELLMYREWASNMILWEFIGD 1303
Query: 1264 SDDWIQSQIPEIVKSNVEALRDDTSDVDEMDAETFVQAYVNIVAGACISLGLRFAGTKNA 1323
+I + VK E++ + Y +AG +++G+RFA T N
Sbjct: 1304 DLSFIMKDVDIGVK------------FSELNTDLLPIYYT--MAGRILAMGIRFASTGNL 1349
Query: 1324 NVQELLYGYAVYFLNEIKPVFATRGNAFPKGLSRYVDRCTLEICLHLVVLSLSVVMAGSG 1383
++ +L FL P++ G + L + + + +++V+SLS+VM SG
Sbjct: 1350 KIRNILLSLVDKFL----PLYQYPGK---QNLDFRLTISVINVLTNVIVVSLSMVMCASG 1402
Query: 1384 HLQTFRLLRFL 1394
L+ R +++L
Sbjct: 1403 DLEVLRRVKYL 1413
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 27/177 (15%)
Query: 1393 FLRGRNSADGHASYGIQMAVSLAIGFLFLGGGMRTFSTNN-NSIAALFISLYPRLPSGPN 1451
+L + D H YG ++ +LA+GFLFLG G +T+ SIA L +S+ P + P+
Sbjct: 1480 YLEDKKDIDDH--YGKFISTNLALGFLFLGSGQYALNTSTLESIAFLSMSVLPTYTT-PH 1536
Query: 1452 DNRCHLQAFRHLYVLATEARWIQTVDVDTG-----LPVYAPFEVTVRETEHYSETSYCEV 1506
LQ +H + +A E R + D+ TG +P+ E V + E E S
Sbjct: 1537 P----LQELKHFWSMAVEPRCLVIKDISTGDAVNNVPIELVVEEDVEKEEVIREIS---- 1588
Query: 1507 TPCILPERAILKRVCVCGPRYWPQVIELVPEDKPWWSYGDKNDPFNSG--VLYIKRK 1561
TPC+LP+ + +K + V Y+P + + +S D F SG ++YI+RK
Sbjct: 1589 TPCLLPDFSKIKSIRVKMHGYFPLEVNFTKD----YSASD----FFSGGTIIYIQRK 1637
>sp|Q9SYK4|IP5PD_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 13 OS=Arabidopsis
thaliana GN=5PTASE13 PE=1 SV=1
Length = 1136
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 993 IQGKMSRTWIMYNKPEEPNITHAGLLLALGLHGHLRALTIS------DIYKYFYQEHES- 1045
+ GK+ +W+ +N+P G + +L HG +R ++ +I + + E+
Sbjct: 505 LDGKLISSWVSHNEPVIKLAAGGGFIFSLATHGGVRGWYVTSPGPLDNIIRTELSQKETL 564
Query: 1046 ----TAVGLMLGL------AASYRGTMQPVISKSLYVHIPARHPSSVELEVPTILQSAAL 1095
V +++G AS+ M + S + V I A VE+ + SAA
Sbjct: 565 YARQDNVRILIGTWNVGQGRASHDALMSWLGSVTSDVGIVAVGLQEVEMGAGFLAMSAAK 624
Query: 1096 MSVGLLYEGSAHPQTMQILLGEIGRRSGGDNVLEREGHAVSAGFALGLVA 1145
+VGL EGSA Q + IG+ N ER G AG + L A
Sbjct: 625 ETVGL--EGSA---VGQWWIDAIGKALDEKNTFERMGSRQLAGLLISLWA 669
>sp|Q65236|NIFSL_ASFM2 NifS-like protein OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-132 PE=3 SV=1
Length = 376
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 1402 GHASYGIQMAVSLAIGFLFLGGGMRTFSTNNNSIAALFISLYPRLPSGPNDNRCH----- 1456
G G++ V +G L GGG+R S N I A++ +L + PS N H
Sbjct: 193 GVGVLGMKKKVMQDLGPLIFGGGLRGGSPNIPGIHAMYRTLIQQRPSIKKINTIHKLFIK 252
Query: 1457 -LQAFRHLYVLATEARWIQT----VDVDTGLPVYAPFEV 1490
L+ +H+Y+ + + V+V GLP Y F V
Sbjct: 253 TLKKHQHVYLPGLSIEDVPSNGMPVEVPKGLPGYILFSV 291
>sp|Q5A2W2|DML1_CANAL Protein DML1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=DML1 PE=3 SV=1
Length = 573
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 464 SSSLTNDCITAMAEGLSSNFYNYFLVLLWGDNNSTYLSEASSDVDSEWNSFCSIIMQMGQ 523
+S + D I SS+ N ++ +G NST LSE + + ++ SF ++++ +
Sbjct: 244 TSEMLIDLIDEFFNNTSSDKQNLWI---YGIMNSTKLSEKTQSIRTKL-SFIKTLIELTK 299
Query: 524 KPSLISKQHLNSAPDSSW---------EFLLNSDFHKNYCKFNFIAGISG 564
+ SLI +LN++ D SW ++ S++H++ FI I G
Sbjct: 300 QSSLIFPMNLNNSKDESWHNNYSMLTDKYNSGSNWHQSSLYATFINSIWG 349
>sp|Q123Z8|KUP1_POLSJ Probable potassium transport system protein kup 1 OS=Polaromonas
sp. (strain JS666 / ATCC BAA-500) GN=kup1 PE=3 SV=1
Length = 641
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 148 LLLQSIEGNFPAHAPFPSSSRLLGARDIPRPRREIGHSPQNNYSLPSSFNHNIKGETVSM 207
LL+++I N P PF SS L + R R ++ N ++P + HN+K V
Sbjct: 465 LLIENIRNNDPELLPFISS---LAKDSMHRTPRTAVYAVANPDTVPQALLHNLKHNQVIH 521
Query: 208 SSHLILSDLLEEPQCTYIEER 228
+LIL+ + E EER
Sbjct: 522 ERNLILTVVFHEVPWIPFEER 542
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 683,121,650
Number of Sequences: 539616
Number of extensions: 29219067
Number of successful extensions: 60930
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 60810
Number of HSP's gapped (non-prelim): 46
length of query: 1854
length of database: 191,569,459
effective HSP length: 132
effective length of query: 1722
effective length of database: 120,340,147
effective search space: 207225733134
effective search space used: 207225733134
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)