Query 000212
Match_columns 1850
No_of_seqs 752 out of 1919
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 01:37:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 100.0 7.2E-73 2.5E-77 671.8 16.4 234 308-569 113-346 (381)
2 3dxt_A JMJC domain-containing 100.0 1.1E-70 3.7E-75 644.2 16.0 234 307-568 94-327 (354)
3 3opt_A DNA damage-responsive t 100.0 1.2E-69 4.2E-74 637.8 7.2 229 308-566 139-368 (373)
4 3avr_A Lysine-specific demethy 100.0 7.3E-55 2.5E-59 536.2 20.4 285 386-687 225-522 (531)
5 4ask_A Lysine-specific demethy 100.0 5.1E-52 1.7E-56 500.6 23.9 280 392-687 206-497 (510)
6 2xxz_A Lysine-specific demethy 100.0 2.9E-41 9.9E-46 395.0 9.6 154 391-553 171-329 (332)
7 2kk0_A AT-rich interactive dom 99.9 2.5E-23 8.6E-28 220.2 10.1 117 71-192 9-125 (145)
8 2li6_A SWI/SNF chromatin-remod 99.8 1.3E-21 4.4E-26 199.9 7.6 105 80-193 2-106 (116)
9 2lm1_A Lysine-specific demethy 99.8 1.8E-21 6.1E-26 196.5 7.8 105 83-193 1-105 (107)
10 2cxy_A BAF250B subunit, HBAF25 99.8 5.5E-21 1.9E-25 197.8 9.8 107 79-191 4-110 (125)
11 2eqy_A RBP2 like, jumonji, at 99.8 1.3E-19 4.3E-24 186.6 10.3 104 86-195 2-105 (122)
12 2jrz_A Histone demethylase jar 99.8 2.5E-19 8.4E-24 183.2 9.8 103 87-195 1-103 (117)
13 2rq5_A Protein jumonji; develo 99.8 3E-19 1E-23 182.3 8.0 101 87-191 2-102 (121)
14 1c20_A DEAD ringer protein; DN 99.8 3.3E-19 1.1E-23 185.3 7.5 104 85-193 11-114 (128)
15 1ig6_A MRF-2, modulator recogn 99.7 2.9E-18 1E-22 172.9 6.7 93 99-193 3-95 (107)
16 2jxj_A Histone demethylase jar 99.7 9.4E-18 3.2E-22 166.1 7.4 88 100-191 8-95 (96)
17 1kkx_A Transcription regulator 99.7 1.7E-17 5.6E-22 170.7 7.9 87 99-192 18-104 (123)
18 2e6r_A Jumonji/ARID domain-con 99.4 1.4E-14 4.8E-19 141.7 1.9 70 246-315 16-90 (92)
19 3kqi_A GRC5, PHD finger protei 99.4 9E-15 3.1E-19 138.0 -0.2 64 1706-1771 7-75 (75)
20 1wep_A PHF8; structural genomi 99.4 9.9E-14 3.4E-18 132.3 3.2 57 1705-1761 8-69 (79)
21 3o70_A PHD finger protein 13; 99.3 1.7E-13 5.9E-18 126.5 1.1 57 1699-1755 9-67 (68)
22 3o7a_A PHD finger protein 13 v 99.3 3.8E-13 1.3E-17 117.9 0.6 47 1708-1754 3-51 (52)
23 1wem_A Death associated transc 99.3 1.9E-13 6.3E-18 129.5 -3.3 54 1705-1758 12-73 (76)
24 1wee_A PHD finger family prote 99.2 8.2E-13 2.8E-17 123.7 0.6 55 1705-1759 12-70 (72)
25 1we9_A PHD finger family prote 99.2 2.2E-12 7.6E-17 118.0 2.1 52 1706-1757 3-60 (64)
26 3kv5_D JMJC domain-containing 99.2 1.9E-12 6.6E-17 161.5 0.1 82 1704-1787 32-118 (488)
27 1wew_A DNA-binding family prot 99.2 2.5E-12 8.4E-17 122.3 0.6 53 1705-1757 12-74 (78)
28 3c6w_A P28ING5, inhibitor of g 99.2 2.2E-12 7.6E-17 115.7 0.1 50 1705-1755 5-58 (59)
29 1wen_A Inhibitor of growth fam 99.2 5.8E-12 2E-16 117.2 2.6 52 1705-1757 12-67 (71)
30 1f62_A Transcription factor WS 99.2 7.6E-12 2.6E-16 109.3 3.0 49 248-296 2-50 (51)
31 2g6q_A Inhibitor of growth pro 99.2 3.4E-12 1.2E-16 115.6 0.2 49 1706-1755 8-60 (62)
32 2rsd_A E3 SUMO-protein ligase 99.1 3.3E-12 1.1E-16 118.2 -0.3 50 1706-1755 7-65 (68)
33 1x4i_A Inhibitor of growth pro 99.1 1.7E-12 5.7E-17 120.5 -2.5 51 1706-1757 3-57 (70)
34 1weu_A Inhibitor of growth fam 99.1 9.8E-12 3.3E-16 120.5 2.4 53 1704-1757 31-87 (91)
35 3kv4_A PHD finger protein 8; e 99.1 2.4E-12 8E-17 158.4 -3.2 77 1706-1784 2-83 (447)
36 2jmi_A Protein YNG1, ING1 homo 99.1 4.6E-12 1.6E-16 122.6 -0.9 50 1704-1754 21-75 (90)
37 2vnf_A ING 4, P29ING4, inhibit 99.1 1E-11 3.6E-16 111.9 -0.0 50 1705-1755 6-59 (60)
38 3asl_A E3 ubiquitin-protein li 99.1 6.1E-11 2.1E-15 110.2 4.2 48 248-295 20-68 (70)
39 2e6s_A E3 ubiquitin-protein li 99.1 6.7E-11 2.3E-15 111.8 4.3 49 247-295 27-76 (77)
40 3shb_A E3 ubiquitin-protein li 99.0 8.7E-11 3E-15 110.8 4.0 48 248-295 28-76 (77)
41 1fp0_A KAP-1 corepressor; PHD 99.0 8.3E-11 2.9E-15 113.0 3.9 51 244-297 23-73 (88)
42 1mm2_A MI2-beta; PHD, zinc fin 99.0 1E-10 3.5E-15 105.8 4.3 51 244-297 7-57 (61)
43 2lri_C Autoimmune regulator; Z 99.0 1.1E-10 3.6E-15 107.2 3.2 48 246-296 12-59 (66)
44 2kgg_A Histone demethylase jar 99.0 5.5E-11 1.9E-15 104.2 1.0 43 1711-1753 5-52 (52)
45 1wev_A Riken cDNA 1110020M19; 99.0 1.1E-10 3.7E-15 113.4 2.5 52 245-296 15-72 (88)
46 1xwh_A Autoimmune regulator; P 99.0 1.4E-10 4.8E-15 106.7 2.6 49 246-297 8-56 (66)
47 2yql_A PHD finger protein 21A; 99.0 2E-10 7E-15 102.2 3.1 48 245-295 8-55 (56)
48 3kv5_D JMJC domain-containing 98.9 7.5E-10 2.6E-14 138.3 8.2 138 418-571 268-408 (488)
49 3pur_A Lysine-specific demethy 98.9 1.8E-10 6.1E-15 142.1 2.3 80 1705-1786 36-123 (528)
50 2puy_A PHD finger protein 21A; 98.9 2.6E-10 8.7E-15 103.0 2.5 47 246-295 5-51 (60)
51 2lv9_A Histone-lysine N-methyl 98.9 3.8E-10 1.3E-14 111.8 3.8 50 1706-1755 25-76 (98)
52 2yt5_A Metal-response element- 98.9 2.1E-10 7.1E-15 105.6 1.6 52 246-297 6-62 (66)
53 2k16_A Transcription initiatio 98.9 2.2E-10 7.6E-15 108.1 1.7 53 1705-1757 14-70 (75)
54 2l5u_A Chromodomain-helicase-D 98.9 2.9E-10 9.9E-15 102.9 2.3 48 245-295 10-57 (61)
55 3ask_A E3 ubiquitin-protein li 98.9 6.5E-10 2.2E-14 124.2 3.8 50 246-295 174-224 (226)
56 2vpb_A Hpygo1, pygopus homolog 98.9 1.7E-10 5.7E-15 105.5 -1.4 48 1707-1754 7-65 (65)
57 2ku3_A Bromodomain-containing 98.8 5.8E-10 2E-14 103.7 1.5 49 246-296 16-66 (71)
58 2kwj_A Zinc finger protein DPF 98.8 1.2E-09 4E-14 111.4 3.2 48 248-295 60-107 (114)
59 2l43_A N-teminal domain from h 98.8 7.2E-10 2.5E-14 107.5 0.8 51 245-297 24-76 (88)
60 3kv4_A PHD finger protein 8; e 98.8 4.1E-09 1.4E-13 129.8 7.5 142 414-571 225-373 (447)
61 3u5n_A E3 ubiquitin-protein li 98.8 2E-09 6.7E-14 121.1 3.4 52 243-297 4-55 (207)
62 2ri7_A Nucleosome-remodeling f 98.7 5.9E-10 2E-14 122.0 -1.8 53 1705-1757 4-61 (174)
63 2xb1_A Pygopus homolog 2, B-ce 98.7 1.2E-09 3.9E-14 109.6 0.3 47 1711-1757 6-63 (105)
64 2ysm_A Myeloid/lymphoid or mix 98.7 4.2E-09 1.4E-13 106.9 3.9 50 248-297 56-105 (111)
65 3o36_A Transcription intermedi 98.7 3.9E-09 1.3E-13 116.6 3.9 49 246-297 4-52 (184)
66 3v43_A Histone acetyltransfera 98.7 5.3E-09 1.8E-13 106.3 4.2 48 248-295 63-111 (112)
67 3pur_A Lysine-specific demethy 98.7 1E-07 3.4E-12 117.9 14.2 136 418-571 298-442 (528)
68 2ro1_A Transcription intermedi 98.7 8.6E-09 2.9E-13 114.1 4.0 49 246-297 2-50 (189)
69 1wep_A PHF8; structural genomi 98.7 1.2E-08 4.1E-13 97.2 4.4 68 1449-1523 10-77 (79)
70 3kqi_A GRC5, PHD finger protei 98.6 5.9E-09 2E-13 98.3 1.4 57 1450-1506 9-65 (75)
71 3lqh_A Histone-lysine N-methyl 98.6 5.1E-09 1.8E-13 114.7 0.9 49 1710-1758 3-66 (183)
72 2k16_A Transcription initiatio 98.6 8.8E-09 3E-13 97.2 2.2 51 246-296 18-68 (75)
73 2ysm_A Myeloid/lymphoid or mix 98.6 4.3E-08 1.5E-12 99.5 5.7 49 1450-1499 6-54 (111)
74 1we9_A PHD finger family prote 98.5 3E-08 1E-12 90.7 3.3 55 1449-1503 4-59 (64)
75 3v43_A Histone acetyltransfera 98.5 5.9E-08 2E-12 98.6 4.4 50 1450-1499 4-61 (112)
76 2kwj_A Zinc finger protein DPF 98.3 1.3E-07 4.4E-12 96.4 2.1 43 1713-1755 63-108 (114)
77 1wee_A PHD finger family prote 98.3 1.8E-07 6.1E-12 87.6 2.6 57 1446-1503 11-67 (72)
78 3o70_A PHD finger protein 13; 98.3 2.4E-07 8.3E-12 85.5 2.9 50 1448-1500 16-65 (68)
79 2kgg_A Histone demethylase jar 98.3 2E-07 6.7E-12 81.7 2.0 46 1454-1500 6-52 (52)
80 4gne_A Histone-lysine N-methyl 98.3 3E-07 1E-11 92.0 3.4 47 244-295 13-61 (107)
81 3o7a_A PHD finger protein 13 v 98.3 2.7E-07 9.2E-12 80.8 2.4 46 1452-1500 5-50 (52)
82 2vpb_A Hpygo1, pygopus homolog 98.2 1.2E-07 4E-12 86.8 -1.2 51 1450-1500 7-64 (65)
83 2lv9_A Histone-lysine N-methyl 98.2 6.9E-07 2.4E-11 88.5 4.1 48 248-297 30-77 (98)
84 1wem_A Death associated transc 98.2 2.1E-07 7.1E-12 88.0 0.3 52 1451-1503 16-71 (76)
85 1f62_A Transcription factor WS 98.1 7.9E-07 2.7E-11 77.5 2.4 43 1713-1755 5-50 (51)
86 2xb1_A Pygopus homolog 2, B-ce 98.1 3.7E-07 1.3E-11 91.5 0.1 52 1452-1503 4-62 (105)
87 3lqh_A Histone-lysine N-methyl 98.0 1E-06 3.5E-11 96.6 2.0 50 1451-1500 2-61 (183)
88 1wew_A DNA-binding family prot 98.0 1.3E-06 4.5E-11 82.9 2.0 53 1449-1502 14-72 (78)
89 2vnf_A ING 4, P29ING4, inhibit 98.0 1.2E-06 4.2E-11 78.9 1.5 46 246-295 10-58 (60)
90 1wen_A Inhibitor of growth fam 98.0 3.9E-06 1.3E-10 78.1 4.7 50 1447-1501 12-64 (71)
91 1weu_A Inhibitor of growth fam 98.0 3.9E-06 1.3E-10 81.5 4.5 53 1444-1501 29-84 (91)
92 2jmi_A Protein YNG1, ING1 homo 98.0 2.5E-06 8.6E-11 82.7 3.1 50 1447-1501 22-75 (90)
93 3c6w_A P28ING5, inhibitor of g 97.9 1.8E-06 6.3E-11 77.4 1.3 48 1449-1501 7-57 (59)
94 2g6q_A Inhibitor of growth pro 97.9 2.2E-06 7.6E-11 77.6 1.4 49 1448-1501 8-59 (62)
95 2ri7_A Nucleosome-remodeling f 97.9 1.9E-06 6.6E-11 94.2 -0.2 56 1448-1503 5-60 (174)
96 2rsd_A E3 SUMO-protein ligase 97.8 5.8E-06 2E-10 76.4 2.8 51 1451-1502 10-65 (68)
97 1x4i_A Inhibitor of growth pro 97.8 4E-06 1.4E-10 77.8 1.4 49 1449-1502 4-55 (70)
98 2l5u_A Chromodomain-helicase-D 97.8 4.2E-06 1.4E-10 75.7 0.9 49 1704-1755 6-58 (61)
99 1xwh_A Autoimmune regulator; P 97.7 6.2E-06 2.1E-10 75.8 1.3 47 1708-1757 7-57 (66)
100 2ku3_A Bromodomain-containing 97.7 4.1E-06 1.4E-10 78.0 -0.1 51 1706-1756 14-67 (71)
101 2lbm_A Transcriptional regulat 97.7 5.4E-06 1.8E-10 86.8 0.0 52 243-297 60-118 (142)
102 2l43_A N-teminal domain from h 97.7 3.2E-06 1.1E-10 82.0 -1.6 52 1706-1757 23-77 (88)
103 2yql_A PHD finger protein 21A; 97.7 7.2E-06 2.5E-10 72.9 0.6 44 1708-1754 8-55 (56)
104 3k3o_A PHF8, PHD finger protei 97.7 0.00011 3.7E-09 88.5 10.6 138 418-571 149-289 (371)
105 2ypd_A Probable JMJC domain-co 97.7 7.4E-05 2.5E-09 89.0 8.9 104 450-553 234-344 (392)
106 3pua_A GRC5, PHD finger protei 97.7 0.00014 4.8E-09 88.0 11.5 135 419-571 177-316 (392)
107 2puy_A PHD finger protein 21A; 97.6 8.4E-06 2.9E-10 73.5 0.2 43 1710-1755 6-52 (60)
108 1mm2_A MI2-beta; PHD, zinc fin 97.6 2.1E-05 7.1E-10 71.1 2.0 47 1707-1756 7-57 (61)
109 4gne_A Histone-lysine N-methyl 97.6 1.7E-05 5.7E-10 79.5 1.4 45 1707-1753 13-60 (107)
110 3kv9_A JMJC domain-containing 97.5 0.00015 5.2E-09 88.0 9.6 137 419-571 178-317 (397)
111 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.5 2.8E-05 9.7E-10 81.0 2.5 35 1723-1757 2-46 (140)
112 2e6s_A E3 ubiquitin-protein li 97.5 8.2E-05 2.8E-09 70.3 4.9 64 1436-1500 6-75 (77)
113 2yu1_A JMJC domain-containing 97.5 0.00051 1.8E-08 85.0 12.9 136 418-571 198-338 (451)
114 2e6r_A Jumonji/ARID domain-con 97.4 7E-05 2.4E-09 73.3 3.1 57 1445-1502 10-66 (92)
115 3asl_A E3 ubiquitin-protein li 97.3 0.00018 6.3E-09 66.7 4.8 55 1445-1500 13-67 (70)
116 2lri_C Autoimmune regulator; Z 97.3 7.3E-05 2.5E-09 68.6 2.0 43 1711-1756 15-60 (66)
117 3rsn_A SET1/ASH2 histone methy 97.3 0.00018 6.1E-09 77.7 4.9 49 1708-1756 4-60 (177)
118 3k2o_A Bifunctional arginine d 97.2 0.0002 6.9E-09 86.0 5.5 117 417-543 173-297 (336)
119 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.2 0.00011 3.6E-09 76.6 2.7 39 1465-1503 1-45 (140)
120 3ql9_A Transcriptional regulat 97.2 2.6E-05 8.9E-10 80.4 -2.4 51 243-296 54-111 (129)
121 2yt5_A Metal-response element- 97.1 9.2E-05 3.1E-09 67.9 0.9 49 1709-1757 7-63 (66)
122 3shb_A E3 ubiquitin-protein li 97.0 0.00057 2E-08 64.5 4.8 56 1444-1500 20-75 (77)
123 3u5n_A E3 ubiquitin-protein li 96.9 0.00026 8.8E-09 79.5 2.2 47 1708-1757 6-56 (207)
124 4gjz_A Lysine-specific demethy 96.9 0.0012 4.3E-08 74.4 7.3 109 416-536 124-235 (235)
125 3ask_A E3 ubiquitin-protein li 96.7 0.00081 2.8E-08 75.5 3.9 48 1453-1500 176-223 (226)
126 1fp0_A KAP-1 corepressor; PHD 96.2 0.0044 1.5E-07 59.8 5.4 51 1449-1503 23-73 (88)
127 4bbq_A Lysine-specific demethy 96.0 0.0031 1.1E-07 64.3 3.3 36 1721-1756 73-115 (117)
128 3d8c_A Hypoxia-inducible facto 95.9 0.0049 1.7E-07 74.6 5.2 110 415-535 182-295 (349)
129 1wil_A KIAA1045 protein; ring 95.9 0.0014 4.8E-08 61.5 0.0 51 245-296 14-76 (89)
130 1wev_A Riken cDNA 1110020M19; 95.7 0.0022 7.4E-08 62.2 0.8 53 1451-1503 16-73 (88)
131 3o36_A Transcription intermedi 95.7 0.0073 2.5E-07 66.5 5.0 49 1452-1504 5-53 (184)
132 3al5_A HTYW5, JMJC domain-cont 95.5 0.017 5.7E-07 69.6 7.3 111 415-539 166-277 (338)
133 2ro1_A Transcription intermedi 94.7 0.014 4.7E-07 64.6 3.2 42 1713-1757 7-51 (189)
134 4bbq_A Lysine-specific demethy 92.2 0.044 1.5E-06 55.7 1.7 40 258-297 72-115 (117)
135 3rsn_A SET1/ASH2 histone methy 91.4 0.11 3.8E-06 56.2 3.7 50 1452-1501 6-58 (177)
136 3k1l_B Fancl; UBC, ring, RWD, 87.2 0.44 1.5E-05 56.5 4.9 85 1417-1501 270-369 (381)
137 1vrb_A Putative asparaginyl hy 85.0 1.7 5.8E-05 52.2 8.6 115 418-548 143-264 (342)
138 1wil_A KIAA1045 protein; ring 85.0 0.38 1.3E-05 45.4 2.3 52 1450-1502 14-76 (89)
139 3ql9_A Transcriptional regulat 81.8 0.31 1.1E-05 50.3 0.3 47 1706-1755 54-111 (129)
140 1x4j_A Ring finger protein 38; 81.7 0.34 1.2E-05 44.8 0.6 49 1447-1500 19-67 (75)
141 2kiz_A E3 ubiquitin-protein li 80.2 0.49 1.7E-05 42.9 1.0 48 1449-1501 12-59 (69)
142 1iym_A EL5; ring-H2 finger, ub 75.4 1.1 3.6E-05 38.6 1.7 45 1451-1500 5-50 (55)
143 2lbm_A Transcriptional regulat 74.5 1.2 4.2E-05 46.7 2.2 47 1706-1755 60-117 (142)
144 4diq_A Lysine-specific demethy 74.2 5 0.00017 50.1 7.9 105 417-544 165-273 (489)
145 2ect_A Ring finger protein 126 73.5 1.7 5.9E-05 40.2 2.8 48 1449-1501 13-60 (78)
146 2l0b_A E3 ubiquitin-protein li 70.6 1.2 4E-05 43.0 0.9 47 1449-1500 38-84 (91)
147 2ep4_A Ring finger protein 24; 70.4 1.1 3.9E-05 41.0 0.8 48 1449-1501 13-60 (74)
148 2ecm_A Ring finger and CHY zin 69.4 1.6 5.5E-05 37.4 1.5 47 1450-1501 4-51 (55)
149 1v87_A Deltex protein 2; ring- 62.3 1.5 5.1E-05 43.8 -0.2 50 1452-1501 26-90 (114)
150 2csy_A Zinc finger protein 183 57.3 1.7 5.7E-05 40.7 -0.9 45 1449-1501 13-57 (81)
151 1weq_A PHD finger protein 7; s 54.2 9.5 0.00033 36.5 3.8 49 1709-1757 26-81 (85)
152 2ecn_A Ring finger protein 141 52.9 3.3 0.00011 37.4 0.4 46 1447-1501 11-56 (70)
153 2d8t_A Dactylidin, ring finger 52.7 5.1 0.00017 36.4 1.7 45 1449-1501 13-57 (71)
154 2ecl_A Ring-box protein 2; RNF 51.1 4 0.00014 38.4 0.7 45 1451-1500 15-71 (81)
155 2ysl_A Tripartite motif-contai 50.9 5.2 0.00018 36.3 1.4 48 1449-1501 18-65 (73)
156 1bor_A Transcription factor PM 49.5 11 0.00039 32.6 3.3 42 1449-1501 4-45 (56)
157 3nw0_A Non-structural maintena 49.4 7.2 0.00025 44.4 2.6 90 1391-1501 136-225 (238)
158 2ecj_A Tripartite motif-contai 47.2 7.6 0.00026 33.4 1.8 45 1450-1499 14-58 (58)
159 2ysj_A Tripartite motif-contai 45.1 5.3 0.00018 35.3 0.5 46 1449-1499 18-63 (63)
160 2ct2_A Tripartite motif protei 44.1 6.8 0.00023 36.8 1.1 51 1449-1501 13-64 (88)
161 2ct0_A Non-SMC element 1 homol 44.0 7.8 0.00027 36.2 1.4 47 1451-1502 15-61 (74)
162 2xdv_A MYC-induced nuclear ant 43.2 43 0.0015 41.5 8.3 104 415-545 138-246 (442)
163 3fl2_A E3 ubiquitin-protein li 42.2 12 0.0004 37.9 2.6 42 1453-1501 54-95 (124)
164 2y43_A E3 ubiquitin-protein li 40.4 10 0.00035 36.7 1.7 42 1453-1501 24-65 (99)
165 2ecv_A Tripartite motif-contai 40.1 9.2 0.00031 35.4 1.3 50 1449-1501 17-67 (85)
166 1jm7_A BRCA1, breast cancer ty 39.9 13 0.00045 36.5 2.5 44 1453-1501 23-66 (112)
167 2ea6_A Ring finger protein 4; 38.2 5.4 0.00018 35.6 -0.6 47 1449-1500 13-63 (69)
168 2ecw_A Tripartite motif-contai 37.7 10 0.00035 35.1 1.2 50 1449-1501 17-67 (85)
169 4ayc_A E3 ubiquitin-protein li 37.6 6.9 0.00023 40.5 -0.0 40 1453-1500 55-94 (138)
170 3ng2_A RNF4, snurf, ring finge 37.6 4.1 0.00014 36.8 -1.6 47 1450-1501 9-59 (71)
171 3l11_A E3 ubiquitin-protein li 37.2 11 0.00037 37.6 1.4 43 1452-1501 16-58 (115)
172 2d8s_A Cellular modulator of i 37.2 11 0.00036 35.7 1.2 50 1449-1501 13-66 (80)
173 1chc_A Equine herpes virus-1 r 36.6 8.8 0.0003 34.3 0.5 44 1451-1501 5-48 (68)
174 2xeu_A Ring finger protein 4; 36.6 4.1 0.00014 35.8 -1.6 45 1452-1501 4-52 (64)
175 1u4q_A Spectrin alpha chain, b 35.8 5.4E+02 0.019 29.3 19.8 38 875-913 113-150 (322)
176 2egp_A Tripartite motif-contai 35.5 16 0.00056 33.4 2.2 49 1450-1501 11-61 (79)
177 3lrq_A E3 ubiquitin-protein li 35.4 7.3 0.00025 38.1 -0.3 44 1452-1501 23-66 (100)
178 1e4u_A Transcriptional repress 35.3 11 0.00039 35.3 1.1 47 1450-1501 10-58 (78)
179 1gvd_A MYB proto-oncogene prot 35.3 29 0.00099 29.7 3.6 39 134-185 13-51 (52)
180 2ckl_B Ubiquitin ligase protei 34.8 8 0.00027 41.2 -0.1 44 1452-1501 55-98 (165)
181 3ztg_A E3 ubiquitin-protein li 34.5 8.6 0.00029 36.6 0.1 48 1449-1501 11-58 (92)
182 2djb_A Polycomb group ring fin 32.5 13 0.00043 33.8 0.9 47 1448-1501 12-58 (72)
183 3a1b_A DNA (cytosine-5)-methyl 31.8 8.5 0.00029 41.0 -0.5 52 243-297 76-135 (159)
184 4a0k_B E3 ubiquitin-protein li 31.7 11 0.00036 38.4 0.2 44 1452-1500 49-107 (117)
185 1guu_A C-MYB, MYB proto-oncoge 31.6 40 0.0014 28.7 3.9 39 134-185 13-51 (52)
186 3dpl_R Ring-box protein 1; ubi 30.9 12 0.00042 37.2 0.5 46 1451-1501 37-97 (106)
187 2ecy_A TNF receptor-associated 30.2 12 0.00041 33.3 0.3 45 1450-1501 14-58 (66)
188 1ity_A TRF1; helix-turn-helix, 29.3 43 0.0015 30.4 3.9 40 134-185 20-60 (69)
189 2yur_A Retinoblastoma-binding 28.1 18 0.00061 33.1 1.1 47 1450-1501 14-60 (74)
190 2dim_A Cell division cycle 5-l 27.5 50 0.0017 30.0 4.0 39 134-185 19-57 (70)
191 1jm7_B BARD1, BRCA1-associated 27.0 28 0.00096 34.8 2.4 39 1453-1500 24-62 (117)
192 1vyx_A ORF K3, K3RING; zinc-bi 26.5 12 0.0004 33.4 -0.5 50 1449-1501 4-55 (60)
193 1x41_A Transcriptional adaptor 26.2 65 0.0022 28.4 4.3 38 135-185 19-56 (60)
194 2pv0_B DNA (cytosine-5)-methyl 25.8 8.5 0.00029 46.6 -2.0 52 243-297 90-149 (386)
195 2d9a_A B-MYB, MYB-related prot 25.2 61 0.0021 28.5 4.0 39 134-185 18-56 (60)
196 1rmd_A RAG1; V(D)J recombinati 24.4 20 0.00068 35.7 0.7 69 1452-1539 24-92 (116)
197 2ckl_A Polycomb group ring fin 24.4 16 0.00055 35.9 0.0 43 1452-1501 16-58 (108)
198 1wfp_A Zinc finger (AN1-like) 23.2 78 0.0027 29.5 4.3 29 626-656 25-53 (74)
199 1wim_A KIAA0161 protein; ring 22.8 19 0.00064 34.6 0.1 51 1450-1500 4-59 (94)
200 1wff_A Riken cDNA 2810002D23 p 22.6 66 0.0022 30.8 3.8 29 626-656 25-54 (85)
201 2k1p_A Zinc finger RAN-binding 22.3 30 0.001 27.2 1.2 14 284-297 3-16 (33)
202 2lq6_A Bromodomain-containing 22.0 26 0.0009 33.6 1.0 34 1705-1739 13-49 (87)
203 2elk_A SPCC24B10.08C protein; 21.8 84 0.0029 27.6 4.2 39 134-184 19-57 (58)
204 1wfh_A Zinc finger (AN1-like) 21.3 34 0.0012 31.0 1.5 28 627-656 16-43 (64)
205 1z6u_A NP95-like ring finger p 20.3 19 0.00063 38.0 -0.5 42 1453-1501 80-121 (150)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=7.2e-73 Score=671.83 Aligned_cols=234 Identities=32% Similarity=0.622 Sum_probs=205.4
Q ss_pred ccchHhHHHHHHHHhhhccCCCCcchhhhHhhhHhHhccCCCccccccccCCCCCCcCCCCCCcCCCCCCCccccccccc
Q 000212 308 RYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEY 387 (1850)
Q Consensus 308 ~ysL~~F~~~ad~~k~~~F~~~~~~~~~~E~efW~~v~~~~~~v~V~yG~Di~s~~~gSgFp~~~~~~~~~~~~~~~~~y 387 (1850)
.||+.+|+++|+.++ +......+.++||++||++|.. ++|+||+|++++ +|+.
T Consensus 113 ~~tl~~f~~~a~~~~--~~~p~~~~~~~lE~~fWr~v~~----~~~~YgaD~~gS----~f~~----------------- 165 (381)
T 2ox0_A 113 AMTVREFRKIANSDK--YCTPRYSEFEELERKYWKNLTF----NPPIYGADVNGT----LYEK----------------- 165 (381)
T ss_dssp CEEHHHHHHHHHSTT--TSCCCCSSHHHHHHHHHHHTTS----SCCEEEEEEECC----CSCT-----------------
T ss_pred ccCHHHHHHHhcccc--cCCCccCCHHHHHHHHHhhCCc----CCceeecCCCcc----cCCC-----------------
Confidence 466666776666433 2222345678999999999984 578999999854 4542
Q ss_pred cCCCcccCCCCCccchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHH
Q 000212 388 CNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVM 467 (1850)
Q Consensus 388 ~~~~WNLnnlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~ 467 (1850)
..++|||||||.+.++||++++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++|
T Consensus 166 ~~~~WNL~~Lp~ll~~ll~~~~~~I~GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~ 245 (381)
T 2ox0_A 166 HVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLA 245 (381)
T ss_dssp TCCSSCTTCCCCGGGHHHHHHCCCCBTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred CCCCCchhhhhhHHHHHHHhcCCCCCCcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHH
Confidence 14799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhh
Q 000212 468 RSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 547 (1850)
Q Consensus 468 ~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~ 547 (1850)
++.+|+++.+|+++|+|++++++|+.|+++||||++++|+|||||||||||||||||+||||+||||||+++|+++|..|
T Consensus 246 ~~~~P~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a 325 (381)
T 2ox0_A 246 KGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQA 325 (381)
T ss_dssp HHHSHHHHHHCTTGGGGSCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHC
T ss_pred HHhChhhhhcchHHhhccccccCHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHHHhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhCCCCCCCHHHHHHHH
Q 000212 548 ADLYQQYHKAAVLSHEELLCVV 569 (1850)
Q Consensus 548 ~~~y~~~~~~~~fs~~~Ll~~~ 569 (1850)
.+.+... ..-.++|+.++-++
T Consensus 326 ~~c~c~~-~~v~i~~d~~~~~~ 346 (381)
T 2ox0_A 326 VLCSCRK-DMVKISMDVFVRKF 346 (381)
T ss_dssp CCCCSST-TCCCCCCHHHHHHH
T ss_pred hhccccC-CceeecHHHHHHHh
Confidence 7755432 23345777776554
No 2
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=1.1e-70 Score=644.17 Aligned_cols=234 Identities=35% Similarity=0.660 Sum_probs=210.7
Q ss_pred cccchHhHHHHHHHHhhhccCCCCcchhhhHhhhHhHhccCCCccccccccCCCCCCcCCCCCCcCCCCCCCcccccccc
Q 000212 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNE 386 (1850)
Q Consensus 307 k~ysL~~F~~~ad~~k~~~F~~~~~~~~~~E~efW~~v~~~~~~v~V~yG~Di~s~~~gSgFp~~~~~~~~~~~~~~~~~ 386 (1850)
+.||+.+|+++|+.. +|......+.++||++||+.+... .++||||++ ||+||.
T Consensus 94 k~~t~~~f~~~a~~~--~~~~p~~~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~---------------- 147 (354)
T 3dxt_A 94 KAMTVGEYRHLANSK--KYQTPPHQNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDE---------------- 147 (354)
T ss_dssp CCEEHHHHHHHHTST--TTSCCCCSSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCT----------------
T ss_pred CccCHHHHHHHHhhh--hccCCCCCCHHHHHHHHhhhcccC----CceeeecCC----CcccCC----------------
Confidence 568999999999853 344444567889999999998753 489999998 889983
Q ss_pred ccCCCcccCCCCCccchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHH
Q 000212 387 YCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1850)
Q Consensus 387 y~~~~WNLnnlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1850)
..++|||||||.+.++||++++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++
T Consensus 148 -~~~~WNL~~L~~~~~~Ll~~~~~~I~GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l 226 (354)
T 3dxt_A 148 -NTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERL 226 (354)
T ss_dssp -TCCSSCTTSSCCHHHHHHHHHCCCCCCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred -CcchhhhhhccchhHHHHhhcCCCCCCccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHH
Confidence 1579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhh
Q 000212 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGF 546 (1850)
Q Consensus 467 ~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~ 546 (1850)
|++.+|+++..|++||+|++++++|+.|+++||||++++|+|||||||||||||+|||+|||++||||||+++|+++|..
T Consensus 227 ~k~~~p~~~~~c~~fL~h~~~lisP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~ 306 (354)
T 3dxt_A 227 ARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKM 306 (354)
T ss_dssp HHHHSHHHHHHCTTGGGGCCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHH
T ss_pred HHHhCchhhhhcHHHHhcCcccCCHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHhhCCCCCCCHHHHHHH
Q 000212 547 GADLYQQYHKAAVLSHEELLCV 568 (1850)
Q Consensus 547 ~~~~y~~~~~~~~fs~~~Ll~~ 568 (1850)
|...+... ....|+|+.++..
T Consensus 307 A~~C~C~~-~~v~i~~d~~~~~ 327 (354)
T 3dxt_A 307 ASQCSCGE-ARVTFSMDAFVRI 327 (354)
T ss_dssp CCCCCSSS-CCCCHHHHHHHHH
T ss_pred cccccccC-ccceecHHHHHHh
Confidence 86655432 2344677776654
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=1.2e-69 Score=637.78 Aligned_cols=229 Identities=32% Similarity=0.644 Sum_probs=168.3
Q ss_pred ccchHhHHHHHHHHhhhccCC-CCcchhhhHhhhHhHhccCCCccccccccCCCCCCcCCCCCCcCCCCCCCcccccccc
Q 000212 308 RYTVESFRRVADRAKKKRFRS-GSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNE 386 (1850)
Q Consensus 308 ~ysL~~F~~~ad~~k~~~F~~-~~~~~~~~E~efW~~v~~~~~~v~V~yG~Di~s~~~gSgFp~~~~~~~~~~~~~~~~~ 386 (1850)
.+++++|+++++.++.+.-.- .....++||++||+.|.. .+|+||||+ +||+||.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lE~~yW~~~~~----~~p~YgaD~----~GS~F~~---------------- 194 (373)
T 3opt_A 139 SFNIDDFEQFRTEYTIDLSDFQNTERLKFLEEYYWKTLNF----TTPMYGADT----PGSIFPE---------------- 194 (373)
T ss_dssp CCCHHHHHHHTTTSSCCCTTSSCHHHHHHHHHHHHHTTTT----SCCEEEEEE----ECCCSCT----------------
T ss_pred ccchHHHHHHHHhhccchhhccCcchHHHHHHHHHHhccC----CCceEecCC----CCCCcCC----------------
Confidence 367788877654443321000 123457999999999985 468999996 5999984
Q ss_pred ccCCCcccCCCCCccchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHH
Q 000212 387 YCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1850)
Q Consensus 387 y~~~~WNLnnlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1850)
..++|||||||+ ||+|++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++
T Consensus 195 -~~~~WNL~~Lp~----lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l 269 (373)
T 3opt_A 195 -GLNVWNVAKLPN----ILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKF 269 (373)
T ss_dssp -TCCSSCTTSCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHH
T ss_pred -CCCccChhhhhh----HHHHhcccCCCcchhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHH
Confidence 258999999994 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhh
Q 000212 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGF 546 (1850)
Q Consensus 467 ~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~ 546 (1850)
|++.+|+++.+||++|+|++++++|+.|+++||||++++|+|||||||||||||||||+|||++||||||+++|+++|..
T Consensus 270 ~k~~~p~~~~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~ 349 (373)
T 3opt_A 270 MQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKK 349 (373)
T ss_dssp HHHSSHHHHSSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC--------
T ss_pred HHHhChhhhhhCHHHhhCCcccCCHHHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHhhCCCCCCCHHHHH
Q 000212 547 GADLYQQYHKAAVLSHEELL 566 (1850)
Q Consensus 547 ~~~~y~~~~~~~~fs~~~Ll 566 (1850)
|....-. ...--|++++|.
T Consensus 350 a~~C~C~-~d~v~i~~~~~~ 368 (373)
T 3opt_A 350 AGKCHCI-SDSVEIDVKKLA 368 (373)
T ss_dssp --------------------
T ss_pred CccCccc-CCcceecHHHHH
Confidence 8755432 222234555543
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=7.3e-55 Score=536.25 Aligned_cols=285 Identities=20% Similarity=0.207 Sum_probs=246.7
Q ss_pred cccCCCcccCCCCC-----ccchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcch
Q 000212 386 EYCNSPWNLNNLPK-----LKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEA 460 (1850)
Q Consensus 386 ~y~~~~WNLnnlp~-----~~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~ 460 (1850)
+|..+.|||++||. ..||||+|++..|+|||+|||||||+||+||||+||++++||||||+|++|+||+||++++
T Consensus 225 ~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~ 304 (531)
T 3avr_A 225 KWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYW 304 (531)
T ss_dssp TTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred hhHHHHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHH
Confidence 34456889999997 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCc
Q 000212 461 GAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540 (1850)
Q Consensus 461 ~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~W 540 (1850)
++||+++++...++ ++..+|++|+.|.++|||||+++|+|||||||||||||||||+|||++||||||+++|
T Consensus 305 ~k~e~l~~k~~~~~--------~~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 376 (531)
T 3avr_A 305 GVLNDFCEKNNLNF--------LMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTA 376 (531)
T ss_dssp HHHHHHHHHTTCCT--------TTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSH
T ss_pred HHHHHHHHHcCCCh--------hhceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCch
Confidence 99999998875432 2456789999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHH---HhhCCCCCCCHHHHHHHHhccCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccCCCCC
Q 000212 541 LPHGGFGADLY---QQYHKAAVLSHEELLCVVAKVSD-LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRK 616 (1850)
Q Consensus 541 l~~g~~~~~~y---~~~~~~~~fs~~~Ll~~~a~~~~-~~~~~~~~l~~~l~~~~~~E~~~r~~l~~~gi~~~~~~~~~~ 616 (1850)
++++. |++.| +..+..++|||++|+|+||++.. .|..+..+++..|.+.+..++.+|+.|.+.|+... ...+
T Consensus 377 ~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~~d~~l~~~ik~~L~rsl~~~~~~~~~l~~~g~~i~--~~~~- 452 (531)
T 3avr_A 377 CQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQTLREALIAAGKEII--WHGR- 452 (531)
T ss_dssp HHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE--ECCC-
T ss_pred HHHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE--eccc-
Confidence 99875 55555 55667899999999999999754 67778889999999999999999999999986421 1111
Q ss_pred CCCCCCCccccccccccccchhhccccccC----CCceeehhchhhhccCCCCceEEEEEcCHHHHHHHHHHHhc
Q 000212 617 CPEYVGTEEDPTCIICRQYLYLSAVACRCR----PAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDR 687 (1850)
Q Consensus 617 ~~~~~~~~~~~~C~~C~~~~fls~v~c~~~----~~~~~CL~h~~~~c~c~~~~~~l~yRy~~~eL~~l~~~~~~ 687 (1850)
...+..++|..|+++||++.++|..+ ...++|++|+...|.| .++++++|||+++||.+++++|..
T Consensus 453 ----~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL~~~yd~f~~ 522 (531)
T 3avr_A 453 ----TKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDLMQVYDQFTL 522 (531)
T ss_dssp ----CTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHHHHHHHTCCC
T ss_pred ----cCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhcCcc-ccceEEEEEcCHHHHHHHHHheEe
Confidence 11235689999999999999888531 2347899999875544 579999999999999999999965
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=5.1e-52 Score=500.61 Aligned_cols=280 Identities=19% Similarity=0.143 Sum_probs=243.2
Q ss_pred cccCCCCCc-----cchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHH
Q 000212 392 WNLNNLPKL-----KGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1850)
Q Consensus 392 WNLnnlp~~-----~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1850)
.+|++||.. .||||+|++..|+|||+||||+||+||+||||+||++++||||||+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHhhCcHHhCcCCCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHH
Confidence 345666654 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCc--hhhh
Q 000212 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW--LPHG 544 (1850)
Q Consensus 467 ~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~W--l~~g 544 (1850)
+++..++ ++ +..+|++|+.|+++|||||+++|+|||||||||||||||||.||++++|||||+++| ++.|
T Consensus 286 ~~k~~~d-------~l-~~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHGVD-------YL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTTCC-------TT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHhCcc-------hh-hccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHHHHHHH
Confidence 9987554 33 346788999999999999999999999999999999999999999999999999997 6678
Q ss_pred hhhHHHHHhhCCCCCCCHHHHHHHHhccCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccCCCCCCCCCCCC
Q 000212 545 GFGADLYQQYHKAAVLSHEELLCVVAKVSD-LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGT 623 (1850)
Q Consensus 545 ~~~~~~y~~~~~~~~fs~~~Ll~~~a~~~~-~~~~~~~~l~~~l~~~~~~E~~~r~~l~~~gi~~~~~~~~~~~~~~~~~ 623 (1850)
.+++++|+..++.++|||++|+|+||++.. .|.++...++..|+|++...+..++.+.+.|..-.. ..+ ...
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~d~~l~~liK~~L~rSL~~~~~~~d~~~~~g~~i~~--~~~-----~~~ 430 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAY--QGR-----VKD 430 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE--CCC-----CTT
T ss_pred HHHHHHHHHhCcCcccChHHHHHHHHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEee--cCc-----CCC
Confidence 889999999999999999999999999866 888999999999999999999999999988864211 111 112
Q ss_pred ccccccccccccchhhccccccC----CCceeehhchhhhccCCCCceEEEEEcCHHHHHHHHHHHhc
Q 000212 624 EEDPTCIICRQYLYLSAVACRCR----PAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDR 687 (1850)
Q Consensus 624 ~~~~~C~~C~~~~fls~v~c~~~----~~~~~CL~h~~~~c~c~~~~~~l~yRy~~~eL~~l~~~~~~ 687 (1850)
+..++|..|...+|...++-..+ ...++|+.|+..... ...++++++||+++||.+++|+|..
T Consensus 431 ~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~~-~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 431 EPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSA-GLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp CCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHSTT-TTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CcccccCCCCeEEEEEEEEEecCCCCCccceEChHhhhhcCC-CcceEEEEEEccHHHHHHHHhCeEe
Confidence 24579999999999755554322 124799999986543 5689999999999999999999965
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=395.03 Aligned_cols=154 Identities=22% Similarity=0.203 Sum_probs=137.9
Q ss_pred CcccCCCCCc-----cchhhhhccccCCCcccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHH
Q 000212 391 PWNLNNLPKL-----KGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEK 465 (1850)
Q Consensus 391 ~WNLnnlp~~-----~~slL~~~~~~i~Gv~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~ 465 (1850)
-.+|+.||.. .||||+|++++|+|||+|||||||+||+||||+||++++||||||+|++|+||+||++++++||+
T Consensus 171 ~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~ 250 (332)
T 2xxz_A 171 LQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISA 250 (332)
T ss_dssp HHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHH
T ss_pred HHHHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHH
Confidence 4468888865 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcccCChhhhhhhccccCchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhh
Q 000212 466 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGG 545 (1850)
Q Consensus 466 ~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~ 545 (1850)
+|++..++++ +..+|++|+.|.++||||||++|+|||||||||||||||||+|||+++|||||+++|+++.
T Consensus 251 l~~k~~~d~~--------~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~~- 321 (332)
T 2xxz_A 251 FCDRHGVDYL--------TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQ- 321 (332)
T ss_dssp HHHHTTCCTT--------TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGGGG-
T ss_pred HHHhcCCchh--------hceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHHHH-
Confidence 9998766543 3467899999999999999999999999999999999999999999999999999999774
Q ss_pred hhHHHHHh
Q 000212 546 FGADLYQQ 553 (1850)
Q Consensus 546 ~~~~~y~~ 553 (1850)
.|+++|.-
T Consensus 322 ~a~erye~ 329 (332)
T 2xxz_A 322 LALERYEW 329 (332)
T ss_dssp GC------
T ss_pred HHHHHHHh
Confidence 67777754
No 7
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=99.88 E-value=2.5e-23 Score=220.17 Aligned_cols=117 Identities=25% Similarity=0.379 Sum_probs=108.3
Q ss_pred CccccCCCcccccccccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhc
Q 000212 71 PFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150 (1850)
Q Consensus 71 pfaid~~~F~F~tR~Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~ 150 (1850)
..|+|.++|+|+||+|.||+|++.++ +..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|++
T Consensus 9 ~~~~~~~~f~F~~r~q~L~eL~~~~~---~~~Fl~~L~~F~~~-rG~pl~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~ 84 (145)
T 2kk0_A 9 SHMPDHGDWTYEEQFKQLYELDGDPK---RKEFLDDLFSFMQK-RGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVIN 84 (145)
T ss_dssp CCSCCTTSCCCCCCCTHHHHTTCCHH---HHHHHHHHHHHHHH-TTCCCSSCCEETTEECCHHHHHHHHHHHTCHHHHHH
T ss_pred ccccCCCCceecCccccHhhccCchh---HHHHHHHHHHHHHH-cCCCCccceeECCEEecHHHHHHHHHHhCCHHHhcc
Confidence 56899999999999999999999875 68999999999977 899998888999999999999999999999999999
Q ss_pred ccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhcHHHHHhh
Q 000212 151 EKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYDYEKYYNK 192 (1850)
Q Consensus 151 ~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~ 192 (1850)
+++|.+|++.||++...++ +++.|+++|+|||+|||.|.++
T Consensus 85 ~~~W~~Va~~lg~~~~~ts-a~~~Lk~~Y~k~L~~yE~~~~g 125 (145)
T 2kk0_A 85 KKLWREITKGLNLPTSITS-AAFTLRTQYMKYLYPYECEKRG 125 (145)
T ss_dssp HTCHHHHHHHTTCCTTSTT-HHHHHHHHHHHHSSHHHHHHTC
T ss_pred cCcHHHHHHHhCCCCCcCc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987655 4569999999999999999764
No 8
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.3e-21 Score=199.94 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=97.6
Q ss_pred ccccccccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHh
Q 000212 80 TFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFR 159 (1850)
Q Consensus 80 ~F~tR~Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~ 159 (1850)
.|+||+|+||++++.++. +..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|.++|||++|+++++|.+|++
T Consensus 2 ~~~pr~Q~ln~~e~~~~~--~~~F~~~L~~F~~~-~G~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~ 78 (116)
T 2li6_A 2 SLNPALQEKISTELNNKQ--YELFMKSLIENCKK-RNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQ 78 (116)
T ss_dssp CCCCCSSBCCCSSSSHHH--HHHHHHHHHHHHHT-TTSCCSSCCCCBSCCCSTTHHHHHHHHHTSHHHHHHTTCHHHHHH
T ss_pred CCCchhhhhhcccccchh--HHHHHHHHHHHHHH-cCCCCCCCceECCEeecHHHHHHHHHHhcCHHHccccCcHHHHHH
Confidence 499999999999998874 78999999999976 899998888999999999999999999999999999999999999
Q ss_pred HhcCCCccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000212 160 FVRSNRKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1850)
Q Consensus 160 ~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1850)
.||++. ++.|+++|+|||+|||.|+.+.
T Consensus 79 ~lg~~~------~~~Lr~~Y~k~L~~yE~~~~~~ 106 (116)
T 2li6_A 79 RLQISD------YQQLESIYFRILLPYERHMISQ 106 (116)
T ss_dssp HHTSCC------TTHHHHHHHHHHSHHHHHHHHT
T ss_pred HhCCCh------HHHHHHHHHHHHHHHHHHHhCc
Confidence 999987 2479999999999999998753
No 9
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=99.84 E-value=1.8e-21 Score=196.49 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=95.8
Q ss_pred cccccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhc
Q 000212 83 TKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVR 162 (1850)
Q Consensus 83 tR~Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~ 162 (1850)
||+|.||+|++.++. +..|+.+|.+||+. +|++++ +|+|+|++||||+||++|+++|||++|+++++|.+|++.||
T Consensus 1 ~R~Q~L~el~~~~~~--~~~F~~~L~~F~~~-~g~~l~-~P~i~gk~vdL~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg 76 (107)
T 2lm1_A 1 PRVQRLNELEAKTRV--KLNFLDQIAKFWEL-QGSSLK-IPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQ 76 (107)
T ss_dssp CCCSSSCSSCCSSHH--HHHHHHHHHHHHTT-TCCCCS-CCCTTTSSCCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTT
T ss_pred CceeehhhccCCchH--HHHHHHHHHHHHHH-cCCCCC-CCeECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhC
Confidence 799999999998864 78999999999976 899996 66789999999999999999999999999999999999999
Q ss_pred CCCccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000212 163 SNRKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1850)
Q Consensus 163 ~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1850)
+|.. +++++.|+++|+|||+|||.|.++.
T Consensus 77 ~~~~--~~~~~~lk~~Y~k~L~~yE~~~~~~ 105 (107)
T 2lm1_A 77 YPSS--KSVGATLKAHYERILHPFEVYTSGK 105 (107)
T ss_dssp CCCC--HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCC--CcHHHHHHHHHHHHhHHHHHHHhcC
Confidence 9875 4466799999999999999998754
No 10
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=99.83 E-value=5.5e-21 Score=197.75 Aligned_cols=107 Identities=23% Similarity=0.343 Sum_probs=95.8
Q ss_pred cccccccccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHH
Q 000212 79 FTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVF 158 (1850)
Q Consensus 79 F~F~tR~Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va 158 (1850)
-.|+||+|.||+|++.++ ++.|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|+++++|.+|+
T Consensus 4 ~~f~~r~Q~L~el~~~~~---~~~Fl~~L~~F~~~-rG~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va 79 (125)
T 2cxy_A 4 GSSGEKITKVYELGNEPE---RKLWVDRYLTFMEE-RGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 79 (125)
T ss_dssp ---CCBTTHHHHSCCCTT---HHHHHHHHHHHHHH-TTCCCCBCCEETTEECCHHHHHHHHHHHTSHHHHHHHTCHHHHH
T ss_pred CccccceeeHHhccCchh---HHHHHHHHHHHHHH-cCCCCCCCeeECCEeecHHHHHHHHHHcCCHHHhcccCcHHHHH
Confidence 369999999999998765 57799999999977 89999888889999999999999999999999999999999999
Q ss_pred hHhcCCCccchhhHHHHHHHHHHhhhcHHHHHh
Q 000212 159 RFVRSNRKISDCARHVLCQLYYKHLYDYEKYYN 191 (1850)
Q Consensus 159 ~~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~ 191 (1850)
+.||++.. +++++.||++|+|||+|||.+..
T Consensus 80 ~~lg~~~~--~s~~~~Lk~~Y~k~L~~yE~~~~ 110 (125)
T 2cxy_A 80 TNLNVGTS--SSAASSLKKQYIQYLFAFECKIE 110 (125)
T ss_dssp HHTTSCSS--HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHhCCCCC--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999863 45667999999999999999864
No 11
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.3e-19 Score=186.62 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=93.6
Q ss_pred ccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCC
Q 000212 86 QAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNR 165 (1850)
Q Consensus 86 Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~ 165 (1850)
|.||+|++.+|. +..|+.+|.+||+. +|+++ .+|+|+|++||||+||++|+++|||++|+++|+|.+|++.||++.
T Consensus 2 ~~Lnele~~~~~--~~~Fl~~L~~F~~~-rG~~l-~~P~i~gk~lDLy~Ly~~V~~~GG~~~V~~~k~W~~V~~~lg~~~ 77 (122)
T 2eqy_A 2 SSGSSGEAQTRV--KLNFLDQIAKYWEL-QGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAP 77 (122)
T ss_dssp CCCCCCCCSHHH--HHHHHHHHHHHHHH-HTCCC-CCCBSSSSBCCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCS
T ss_pred CccccccccchH--HHHHHHHHHHHHHH-cCCCC-CCCeECCEeccHHHHHHHHHHccCHHHHcCCCcHHHHHHHhCCCC
Confidence 789999998874 88999999999977 89999 567789999999999999999999999999999999999999987
Q ss_pred ccchhhHHHHHHHHHHhhhcHHHHHhhhhc
Q 000212 166 KISDCARHVLCQLYYKHLYDYEKYYNKLNK 195 (1850)
Q Consensus 166 ~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~~~ 195 (1850)
. + .+++.||++|+|||+|||.|.++...
T Consensus 78 ~-~-~~~~~Lr~~Y~k~L~~yE~~~~~~~~ 105 (122)
T 2eqy_A 78 G-K-AVGSHIRGHYERILNPYNLFLSGDSL 105 (122)
T ss_dssp S-S-HHHHHHHHHHHHTHHHHHHHHHCCTT
T ss_pred C-C-cHHHHHHHHHHHHhHHHHHHHhcCCc
Confidence 4 2 35569999999999999999986543
No 12
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=99.78 E-value=2.5e-19 Score=183.25 Aligned_cols=103 Identities=22% Similarity=0.375 Sum_probs=92.9
Q ss_pred cchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCc
Q 000212 87 AIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRK 166 (1850)
Q Consensus 87 ~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~ 166 (1850)
.||+|++.+|. +..|+.+|.+||+. +|++++ +|+|+|++||||+||++|+++|||++|+++++|.+|++.||++..
T Consensus 1 ~Lnele~~~r~--~~~Fl~~L~~F~~~-rG~~l~-~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~ 76 (117)
T 2jrz_A 1 SMNELEAQTRV--KLNYLDQIAKFWEI-QGSSLK-IPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPG 76 (117)
T ss_dssp CTHHHHTSTTT--HHHHHHHHHHHHHT-TTSCCC-CCEETTEECCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTT
T ss_pred CccccccchhH--HHHHHHHHHHHHHH-cCCCCC-CCeECCEeecHHHHHHHHHHccCHHHhcccCcHHHHHHHhCCCCC
Confidence 38999998874 78999999999976 899996 577899999999999999999999999999999999999999876
Q ss_pred cchhhHHHHHHHHHHhhhcHHHHHhhhhc
Q 000212 167 ISDCARHVLCQLYYKHLYDYEKYYNKLNK 195 (1850)
Q Consensus 167 ~~s~~~~~Lk~~Y~kyL~pYE~~~~~~~~ 195 (1850)
+ .+++.||++|+|||+|||.|.++...
T Consensus 77 -~-~a~~~Lk~~Y~k~L~~yE~~~~~~~~ 103 (117)
T 2jrz_A 77 -K-NIGSLLRSHYERIVYPYEMYQSGANL 103 (117)
T ss_dssp -C-THHHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred -C-cHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3 45679999999999999999987654
No 13
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=99.77 E-value=3e-19 Score=182.34 Aligned_cols=101 Identities=22% Similarity=0.355 Sum_probs=90.8
Q ss_pred cchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCc
Q 000212 87 AIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRK 166 (1850)
Q Consensus 87 ~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~ 166 (1850)
.+++|..||.+ ...|+.+|.+||+. +|++++.+|+|+|++||||+||++|+++|||++||++|+|++|++.|++|..
T Consensus 2 ~~~~~~~r~~~--~~~Fl~~L~~F~~~-rGtpl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~ 78 (121)
T 2rq5_A 2 PLGSLGRRWGP--NVQRLACIKKHLRS-QGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKT 78 (121)
T ss_dssp CCCCCSSCCCH--HHHHHHHHHHHHHH-TTCCCSSCCEETTEECCHHHHHHHHHHTTSHHHHHHTTCHHHHHHHTCCCTT
T ss_pred cHHHhhHhcCC--cHHHHHHHHHHHHH-cCCCCCCCCcCCCEeccHHHHHHHHHHcCcHHHhcccCcHHHHHHHhCCCCC
Confidence 36777788865 67899999999987 8999998999999999999999999999999999999999999999999987
Q ss_pred cchhhHHHHHHHHHHhhhcHHHHHh
Q 000212 167 ISDCARHVLCQLYYKHLYDYEKYYN 191 (1850)
Q Consensus 167 ~~s~~~~~Lk~~Y~kyL~pYE~~~~ 191 (1850)
.++ +++.|+++|+|||+|||.|..
T Consensus 79 ~~s-a~~~Lr~~Y~k~L~~YE~~~~ 102 (121)
T 2rq5_A 79 AQD-RLAKLQEAYCQYLLSYDSLSP 102 (121)
T ss_dssp CSS-HHHHHHHHHHTTHHHHHHCCH
T ss_pred cCc-HHHHHHHHHHHHhHHHHCcCH
Confidence 655 456999999999999998754
No 14
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=99.76 E-value=3.3e-19 Score=185.33 Aligned_cols=104 Identities=26% Similarity=0.403 Sum_probs=94.7
Q ss_pred cccchhhhhhcccCCchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCC
Q 000212 85 TQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSN 164 (1850)
Q Consensus 85 ~Q~ln~L~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~ 164 (1850)
+|+||+|++. .++..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|+++++|.+|++.||++
T Consensus 11 iqrl~el~~~---~~~~~Fl~~L~~F~~~-rG~~l~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~ 86 (128)
T 1c20_A 11 VRQLYEINDD---PKRKEFLDDLFSFMQK-RGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLP 86 (128)
T ss_dssp HHHHHHTCCC---HHHHHHHHHHHHHHTT-TSSCSSCCCEETTEECCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCC
T ss_pred HHHHHccCCc---hHHHHHHHHHHHHHHH-cCCCCccceeECCEeecHHHHHHHHHHhcCHHHcCccCcHHHHHHHhCCC
Confidence 7999999885 2578999999999976 89999888899999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000212 165 RKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1850)
Q Consensus 165 ~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1850)
..+++ +++.||++|+|||+|||.|.++.
T Consensus 87 ~~~~s-a~~~Lk~~Y~k~L~~yE~~~~~~ 114 (128)
T 1c20_A 87 SSITS-AAFTLRTQYMKYLYPYECEKKNL 114 (128)
T ss_dssp SSCCS-HHHHHHHHHHHHTHHHHHHHHCC
T ss_pred CCCCc-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 87665 45689999999999999998754
No 15
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=99.72 E-value=2.9e-18 Score=172.90 Aligned_cols=93 Identities=19% Similarity=0.489 Sum_probs=84.8
Q ss_pred CchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHH
Q 000212 99 DSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQL 178 (1850)
Q Consensus 99 ~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~ 178 (1850)
+++.|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|+++++|.+|++.||++...++ +++.|+++
T Consensus 3 e~~~Fl~~L~~F~~~-rg~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s-~~~~Lk~~ 80 (107)
T 1ig6_A 3 DEQAFLVALYKYMKE-RKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTS-AATCTRRH 80 (107)
T ss_dssp HHHHHHHHHHHHHHT-TTCCGGGCCCSSSSSCCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTT-TTTTHHHH
T ss_pred hHHHHHHHHHHHHHH-cCCCCCcCceECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCCc-HHHHHHHH
Confidence 467899999999977 8999988889999999999999999999999999999999999999999886555 44589999
Q ss_pred HHHhhhcHHHHHhhh
Q 000212 179 YYKHLYDYEKYYNKL 193 (1850)
Q Consensus 179 Y~kyL~pYE~~~~~~ 193 (1850)
|+|||++||.|+++.
T Consensus 81 Y~k~L~~yE~~~~~~ 95 (107)
T 1ig6_A 81 YERLILPYERFIKGE 95 (107)
T ss_dssp HHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999754
No 16
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=99.70 E-value=9.4e-18 Score=166.05 Aligned_cols=88 Identities=27% Similarity=0.357 Sum_probs=80.1
Q ss_pred chhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHH
Q 000212 100 SKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLY 179 (1850)
Q Consensus 100 ~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y 179 (1850)
++.|+.+|.+||+. +|++++ +|.|+|++||||+||++|+++|||++|+++++|.+|++.|+++... .+++.||++|
T Consensus 8 ~~~F~~~L~~F~~~-~g~~l~-~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~--~~~~~Lk~~Y 83 (96)
T 2jxj_A 8 RLDFLDQLAKFWEL-QGSTLK-IPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGK--GTGSLLKSHY 83 (96)
T ss_dssp HHHHHHHHHHHHHH-HTCCCC-CCEETTEECCCHHHHHHHHHHHTTHHHHHHTTHHHHHHHHTCCSCS--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCCCC-CCcCCCEeccHHHHHHHHHHcCCHHHHccCCcHHHHHHHhCCCCcC--cHHHHHHHHH
Confidence 57899999999977 899995 5678999999999999999999999999999999999999998754 3456899999
Q ss_pred HHhhhcHHHHHh
Q 000212 180 YKHLYDYEKYYN 191 (1850)
Q Consensus 180 ~kyL~pYE~~~~ 191 (1850)
+|||+|||.|.+
T Consensus 84 ~k~L~~yE~~~~ 95 (96)
T 2jxj_A 84 ERILYPYELFQS 95 (96)
T ss_dssp TTTTHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999975
No 17
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=99.69 E-value=1.7e-17 Score=170.65 Aligned_cols=87 Identities=20% Similarity=0.338 Sum_probs=81.4
Q ss_pred CchhHHHHHHHHHHHhcCCccccccccCCeecchHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHH
Q 000212 99 DSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQL 178 (1850)
Q Consensus 99 ~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~ 178 (1850)
.++.|+.+|.+||+. +|++++.+|+|+|++||||+||++|+++|||++|+++++|.+|++.|+++. ++.|+++
T Consensus 18 ~~~~Fl~~L~~F~~~-rG~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~------~~~Lr~~ 90 (123)
T 1kkx_A 18 QYELFMKSLIENCKK-RNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISD------YQQLESI 90 (123)
T ss_dssp HHHHHHHHHHHHHHH-TTCSSSSCCCCSSSSCCTTHHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCC------HHHHHHH
T ss_pred hHHHHHHHHHHHHHH-cCCCCCcCceECCEeecHHHHHHHHHHhcCHHhccccccHHHHHHHHCCCh------HHHHHHH
Confidence 468899999999977 899998888999999999999999999999999999999999999999986 4589999
Q ss_pred HHHhhhcHHHHHhh
Q 000212 179 YYKHLYDYEKYYNK 192 (1850)
Q Consensus 179 Y~kyL~pYE~~~~~ 192 (1850)
|+|||+|||.|+.+
T Consensus 91 Y~k~L~~yE~~~~~ 104 (123)
T 1kkx_A 91 YFRILLPYERHMIS 104 (123)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999864
No 18
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.4e-14 Score=141.75 Aligned_cols=70 Identities=34% Similarity=0.974 Sum_probs=63.5
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccC----CCCCCCccCC-cccchHhHH
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS----DKDSFGFVPG-KRYTVESFR 315 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~----~~~~fGF~~g-k~ysL~~F~ 315 (1850)
+..|.+|+.+.+++.||+||.|+++||++|+.|||..+|+|+|+|+.|... +.+.|||+++ +.|||.+|.
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~~~~~~~Gf~~~~~~y~l~~~~ 90 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLSGPS 90 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHSCCSSCCSCCCCCCCCCCSCCS
T ss_pred CCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCccccCCccccChhhcCCceeecccC
Confidence 557999999988889999999999999999999999999999999999763 5678999999 899998873
No 19
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.43 E-value=9e-15 Score=138.03 Aligned_cols=64 Identities=33% Similarity=0.818 Sum_probs=53.8
Q ss_pred CCCceEEEeccCCC-CCCceeecCCCceEEcccccccCCC----CceecCCCcCCCCCCCCCCcCCCCCCC
Q 000212 1706 ARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACKPQAEESSTPQNVDGGRTN 1771 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~~----~~~~C~~C~~~~~~~~~~~~~~~~~~~ 1771 (1850)
+.+.+||+|++|++ +++||+||.|++|||+.|||+++.+ +.|+|+.|...++++++ +++++||+
T Consensus 7 ~~~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~~~~--k~k~~~~~ 75 (75)
T 3kqi_A 7 ATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTL--KKKRTWHK 75 (75)
T ss_dssp CCCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCCCCB--CSCCCCC-
T ss_pred CCCeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCCCeE--eeccccCC
Confidence 45679999999987 5799999999999999999999753 68999999999987766 55556653
No 20
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.38 E-value=9.9e-14 Score=132.26 Aligned_cols=57 Identities=35% Similarity=0.859 Sum_probs=50.5
Q ss_pred cCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCC
Q 000212 1705 RARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESST 1761 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~----~~~~~C~~C~~~~~~~~~ 1761 (1850)
.+.+.+||+|++|++ +++||+||.|++|||+.|||++.. ++.|+|+.|....+++++
T Consensus 8 ~~~~~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~~ 69 (79)
T 1wep_A 8 MALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGPSIM 69 (79)
T ss_dssp CCCCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCSCBC
T ss_pred ccCCccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCCCce
Confidence 356789999999997 589999999999999999999864 579999999999887766
No 21
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.33 E-value=1.7e-13 Score=126.47 Aligned_cols=57 Identities=30% Similarity=0.948 Sum_probs=46.9
Q ss_pred HHhhhccCCCceEEEeccCCCCCCceeecCCCceEEcccccccCC--CCceecCCCcCC
Q 000212 1699 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--PEIYICAACKPQ 1755 (1850)
Q Consensus 1699 ~~~~~~~~~~~~yC~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~~~--~~~~~C~~C~~~ 1755 (1850)
...+...+.+.+||+|++++++++||+||.|++|||+.|||++.. ++.|+|+.|...
T Consensus 9 ~~~~~~~~~~~~~CiC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 9 SGRENLYFQGLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp -----CTTTTCCCSTTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred cccccCCCCCceEeECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 334455667789999999999889999999999999999999974 579999999864
No 22
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.28 E-value=3.8e-13 Score=117.92 Aligned_cols=47 Identities=34% Similarity=1.144 Sum_probs=42.8
Q ss_pred CceEEEeccCCCCCCceeecCCCceEEcccccccCC--CCceecCCCcC
Q 000212 1708 SMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--PEIYICAACKP 1754 (1850)
Q Consensus 1708 ~~~yC~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~~~--~~~~~C~~C~~ 1754 (1850)
+.+||+|++++++++||+||.|++|||+.|||++.. +++|+||.|+.
T Consensus 3 d~~~C~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred cCeEEEeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 358999999999889999999999999999999974 68999999975
No 23
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.25 E-value=1.9e-13 Score=129.48 Aligned_cols=54 Identities=43% Similarity=0.982 Sum_probs=47.7
Q ss_pred cCCCceEEEeccCCCCCCceeecCCCceEEcccccccCC--------CCceecCCCcCCCCC
Q 000212 1705 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--------PEIYICAACKPQAEE 1758 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~~~--------~~~~~C~~C~~~~~~ 1758 (1850)
.|++.+||+|++++++++||+||.|++|||+.|||++.. ++.|+|+.|...+++
T Consensus 12 ~d~~~~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 12 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCTTCCCSTTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred cCCCCCEEECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 455679999999999889999999999999999999864 479999999987764
No 24
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.24 E-value=8.2e-13 Score=123.71 Aligned_cols=55 Identities=27% Similarity=0.661 Sum_probs=47.5
Q ss_pred cCCCceEEEeccCCCC-CCceeecCCCceEEcccccccCC---CCceecCCCcCCCCCC
Q 000212 1705 RARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLSA---PEIYICAACKPQAEES 1759 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~-~~mi~Cd~C~~WfH~~Cvgi~~~---~~~~~C~~C~~~~~~~ 1759 (1850)
.++..+||+|++++++ .+||+||.|++|||+.|||++.. +++|+|+.|....+++
T Consensus 12 ~~~~~~~C~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ps 70 (72)
T 1wee_A 12 VDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGPS 70 (72)
T ss_dssp SCSSEECCTTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSSC
T ss_pred CCCcceEeeCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCCCC
Confidence 4667899999999865 58999999999999999999863 5799999999877654
No 25
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.22 E-value=2.2e-12 Score=118.05 Aligned_cols=52 Identities=31% Similarity=0.776 Sum_probs=45.7
Q ss_pred CCCceEE-EeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCC
Q 000212 1706 ARSMLYC-ICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAE 1757 (1850)
Q Consensus 1706 ~~~~~yC-~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~----~~~~~C~~C~~~~~ 1757 (1850)
+++..|| +|++|++ +++||+||.|++|||+.|||++.. ++.|+|+.|+.+++
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 4567899 9999996 578999999999999999999975 47999999998655
No 26
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.19 E-value=1.9e-12 Score=161.51 Aligned_cols=82 Identities=26% Similarity=0.608 Sum_probs=69.3
Q ss_pred ccCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCCC----CceecCCCcCCCCCCCCCCcCCCCCCCCCCCCCC
Q 000212 1704 LRARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPK 1778 (1850)
Q Consensus 1704 ~~~~~~~yC~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~~----~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~p~ 1778 (1850)
..+.+.+||+|++|++ +++||+||.|++|||+.|||++..+ ++|+|+.|...++++.. ++++++++.++..++
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~~--k~~~~~~r~Dy~~~~ 109 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSLM--KKRRNWHRHDYTEID 109 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHHCSCEE--CCCCCSSSSSTTSCC
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCcCcchh--ccccccccccccccc
Confidence 4567789999999987 6899999999999999999999753 68999999999997766 556778899999988
Q ss_pred CCCCCCCch
Q 000212 1779 TPSPKHTNS 1787 (1850)
Q Consensus 1779 ~~~~~~~~~ 1787 (1850)
..+++....
T Consensus 110 ~gskpvq~g 118 (488)
T 3kv5_D 110 DGSKPVQAG 118 (488)
T ss_dssp SSCSCCCTT
T ss_pred cCcCccccc
Confidence 877776543
No 27
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.18 E-value=2.5e-12 Score=122.27 Aligned_cols=53 Identities=28% Similarity=0.823 Sum_probs=46.1
Q ss_pred cCCCceEEEeccCCCCCCceeec--CCCceEEcccccccCC--------CCceecCCCcCCCC
Q 000212 1705 RARSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSA--------PEIYICAACKPQAE 1757 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~~~mi~Cd--~C~~WfH~~Cvgi~~~--------~~~~~C~~C~~~~~ 1757 (1850)
.++..+||+|++++++++||+|| .|+.|||+.||||+.. +++|+|+.|+....
T Consensus 12 ~~~~~~~CiC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 12 QPEIKVRCVCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp SCCCCCCCSSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCCCCEEeECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccC
Confidence 34578999999998788999999 9999999999999875 36999999987554
No 28
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.18 E-value=2.2e-12 Score=115.73 Aligned_cols=50 Identities=32% Similarity=0.900 Sum_probs=41.8
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCC
Q 000212 1705 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~WfH~~Cvgi~~~~-~~~~C~~C~~~ 1755 (1850)
+.++.+||+|+++++ ++||+||. |. +|||+.|||++..| .+|+||.|..+
T Consensus 5 d~~e~~yC~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYCLCHQVSY-GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEETTTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred CCCCCcEEECCCCCC-CCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 345679999999976 58999999 76 89999999999877 59999999764
No 29
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.17 E-value=5.8e-12 Score=117.20 Aligned_cols=52 Identities=31% Similarity=0.876 Sum_probs=44.6
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCCCC
Q 000212 1705 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~WfH~~Cvgi~~~~-~~~~C~~C~~~~~ 1757 (1850)
++++.+||+|+++++ ++||+||. |. +|||+.|||++..| .+|+||.|.....
T Consensus 12 d~~~~~~C~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 12 DPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp CTTSCCCSTTCCCSC-SSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSS
T ss_pred CCCCCCEEECCCCCC-CCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcccc
Confidence 445679999999987 58999999 77 89999999999876 5999999987544
No 30
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.17 E-value=7.6e-12 Score=109.26 Aligned_cols=49 Identities=39% Similarity=1.062 Sum_probs=45.9
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccC
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1850)
.|.+|+++.+++.||+||+|+++||++|++|||+.+|+|+|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 5899999888889999999999999999999999999999999999763
No 31
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.16 E-value=3.4e-12 Score=115.62 Aligned_cols=49 Identities=31% Similarity=0.817 Sum_probs=41.2
Q ss_pred CCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCC-CceecCCCcCC
Q 000212 1706 ARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~~~~mi~Cd~C~---~WfH~~Cvgi~~~~-~~~~C~~C~~~ 1755 (1850)
.++.+||+|++++++ +||+||.|+ +|||+.|||++..| .+|+||.|+..
T Consensus 8 ~~e~~yC~C~~~~~g-~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 8 PNEPTYCLCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp --CCEETTTTEECCS-EEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred CCCCcEEECCCCCCC-CeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 356799999999765 899999954 99999999999876 49999999864
No 32
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.15 E-value=3.3e-12 Score=118.17 Aligned_cols=50 Identities=28% Similarity=0.863 Sum_probs=42.9
Q ss_pred CCCceEEEeccCCCCCCceeec--CCCceEEcccccccCC-------CCceecCCCcCC
Q 000212 1706 ARSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSA-------PEIYICAACKPQ 1755 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~~~~mi~Cd--~C~~WfH~~Cvgi~~~-------~~~~~C~~C~~~ 1755 (1850)
.++.+||+|++++++++||+|| .|++|||+.|||++.. |++|+|+.|+..
T Consensus 7 ~e~~v~C~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 7 PEAKVRCICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp SSCEECCTTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCCCEEeECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 3457999999998889999999 4999999999999864 258999999864
No 33
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=1.7e-12 Score=120.51 Aligned_cols=51 Identities=35% Similarity=0.815 Sum_probs=43.9
Q ss_pred CCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCC-CceecCCCcCCCC
Q 000212 1706 ARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~~~~mi~Cd~C~---~WfH~~Cvgi~~~~-~~~~C~~C~~~~~ 1757 (1850)
.++.+||+|++++++ +||+||.|+ +|||+.|||++..+ .+|+||.|.....
T Consensus 3 ~~~~~yC~C~~~~~g-~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~~ 57 (70)
T 1x4i_A 3 SGSSGYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAMK 57 (70)
T ss_dssp CSCCCCSTTSCCCCS-SEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCCeEEEcCCCCCC-CEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcccc
Confidence 456799999999765 999999985 99999999999875 5999999987543
No 34
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.14 E-value=9.8e-12 Score=120.54 Aligned_cols=53 Identities=30% Similarity=0.871 Sum_probs=45.3
Q ss_pred ccCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCCCC
Q 000212 1704 LRARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1704 ~~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~WfH~~Cvgi~~~~-~~~~C~~C~~~~~ 1757 (1850)
.++++.+||+|+++++ ++||+||. |. +|||+.|||++..+ .+|+||.|.....
T Consensus 31 ~d~~e~~yCiC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 31 VDPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCSCCCBCSTTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCS
T ss_pred cCCCCCcEEECCCCCC-CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCC
Confidence 4456789999999987 58999999 66 99999999999876 4999999987554
No 35
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.12 E-value=2.4e-12 Score=158.42 Aligned_cols=77 Identities=29% Similarity=0.670 Sum_probs=52.8
Q ss_pred CCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCCCCcCCCCCCCCCCCCCCCC
Q 000212 1706 ARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1780 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~----~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 1780 (1850)
+..++||+|++|++ +++||+||.|++|||++|||+++. +++|+||.|...++++.+ ++++++++++......|
T Consensus 2 ~~~~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~~~~--k~~~~~~r~~~~~~~~p 79 (447)
T 3kv4_A 2 ASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIM--KKRRGSSKGHDTHKGKP 79 (447)
T ss_dssp -CCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCCCEE--CC-------------CC
T ss_pred CCCCeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCCchh--ccccccccccccccccc
Confidence 35689999999987 689999999999999999999974 369999999999998776 45556666654333333
Q ss_pred CCCC
Q 000212 1781 SPKH 1784 (1850)
Q Consensus 1781 ~~~~ 1784 (1850)
....
T Consensus 80 ~~~G 83 (447)
T 3kv4_A 80 VKTG 83 (447)
T ss_dssp CCTT
T ss_pred cccc
Confidence 3333
No 36
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.12 E-value=4.6e-12 Score=122.59 Aligned_cols=50 Identities=36% Similarity=0.851 Sum_probs=42.2
Q ss_pred ccCCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCCC-ceecCC-CcC
Q 000212 1704 LRARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAPE-IYICAA-CKP 1754 (1850)
Q Consensus 1704 ~~~~~~~yC~C~~~~~~~~mi~Cd~C~---~WfH~~Cvgi~~~~~-~~~C~~-C~~ 1754 (1850)
..+++.+||+|++++++ +||+||.|+ +|||+.||||+..+. +||||. |..
T Consensus 21 ~~~~~~~yCiC~~~~~g-~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 21 NNNQEEVYCFCRNVSYG-PMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp ---CCSCCSTTTCCCSS-SEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCCCCcEEEeCCCCCC-CEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 44567899999999876 799999977 999999999998775 999999 874
No 37
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.08 E-value=1e-11 Score=111.86 Aligned_cols=50 Identities=32% Similarity=0.909 Sum_probs=41.1
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCC
Q 000212 1705 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~WfH~~Cvgi~~~~-~~~~C~~C~~~ 1755 (1850)
++++.+||+|+++++ ++||+||. |. +|||+.|||++..| .+|+||.|..+
T Consensus 6 d~~e~~~C~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 6 DPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ---CCEETTTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred CCCCCCEEECCCcCC-CCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 345679999999976 58999999 55 99999999999876 59999999764
No 38
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.06 E-value=6.1e-11 Score=110.18 Aligned_cols=48 Identities=44% Similarity=1.159 Sum_probs=45.3
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCC-CCccccccc
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1850)
.|.+|+++++++.||+||+|+++||++||+|||+.+|+| +|+|+.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 578999988889999999999999999999999999999 999999975
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=6.7e-11 Score=111.76 Aligned_cols=49 Identities=43% Similarity=1.095 Sum_probs=46.2
Q ss_pred hhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCC-CCccccccc
Q 000212 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1850)
Q Consensus 247 ~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1850)
..|.+|+..++++.||+||.|+++||++||+|||+.+|+| +|+|+.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 4799999988889999999999999999999999999999 999999974
No 40
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.03 E-value=8.7e-11 Score=110.81 Aligned_cols=48 Identities=44% Similarity=1.168 Sum_probs=45.3
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCC-Cccccccc
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGN-WYCLECLN 295 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gd-W~C~~C~~ 295 (1850)
.|++|+++.+++.||+||.|+++||++||+|||..+|.|+ |+|+.|.+
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 6999999999999999999999999999999999999999 99999975
No 41
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.03 E-value=8.3e-11 Score=113.02 Aligned_cols=51 Identities=27% Similarity=0.733 Sum_probs=45.7
Q ss_pred hhhhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
..+..|.+|+.+. .+|+||.|+++||++|+.|||+.+|+|+|+|+.|...+
T Consensus 23 ~n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 23 DSATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 3466899999874 59999999999999999999999999999999998654
No 42
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.03 E-value=1e-10 Score=105.84 Aligned_cols=51 Identities=37% Similarity=1.027 Sum_probs=45.2
Q ss_pred hhhhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
..+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|.|+|+|+.|....
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 346689999865 469999999999999999999999999999999998643
No 43
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=107.16 Aligned_cols=48 Identities=25% Similarity=0.588 Sum_probs=43.0
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccC
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1850)
+..|.+|+.+ +.||+||.|+++||++|++|||..+|+|+|||+.|...
T Consensus 12 ~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4579999865 45999999999999999999999999999999999753
No 44
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.00 E-value=5.5e-11 Score=104.17 Aligned_cols=43 Identities=35% Similarity=0.861 Sum_probs=37.7
Q ss_pred EEEeccCCC-CCCceeec-CCCceEEcccccccCC---CCceecCCCc
Q 000212 1711 YCICRKPYD-EKAMIACY-QCDEWYHIDCVKLLSA---PEIYICAACK 1753 (1850)
Q Consensus 1711 yC~C~~~~~-~~~mi~Cd-~C~~WfH~~Cvgi~~~---~~~~~C~~C~ 1753 (1850)
.|+|++|++ +++||+|| .|++|||+.|||++.. +++|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 589999997 47899999 8999999999999975 3799999995
No 45
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.98 E-value=1.1e-10 Score=113.43 Aligned_cols=52 Identities=27% Similarity=0.752 Sum_probs=46.2
Q ss_pred hhhhhhcccCCCC--CcceeccccCCCccccccCCCCCCC----CCCCCCcccccccC
Q 000212 245 LDQICEQCKSGLH--GEVMLLCDRCNKGWHVYCLSPPLKH----VPRGNWYCLECLNS 296 (1850)
Q Consensus 245 ~~~~C~~C~~~~~--~~~lLlCD~Cd~~yH~~CL~PPL~~----vP~gdW~C~~C~~~ 296 (1850)
.+..|.+|++++. ++.||+||.|+++||++|+.|||.. +|.|+|+|+.|+..
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 4568999998865 4689999999999999999999985 99999999999763
No 46
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.97 E-value=1.4e-10 Score=106.70 Aligned_cols=49 Identities=39% Similarity=1.146 Sum_probs=44.8
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
+..|.+|+.+ ..||+||+|+++||++|+.|||+.+|.|+|+|+.|....
T Consensus 8 ~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 8 EDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTC
T ss_pred CCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcc
Confidence 5689999976 369999999999999999999999999999999998755
No 47
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=2e-10 Score=102.16 Aligned_cols=48 Identities=38% Similarity=1.130 Sum_probs=43.5
Q ss_pred hhhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
.+..|.+|+.+ ..||+||.|+++||++|+.|||+.+|+|+|+|+.|..
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 35679999976 3699999999999999999999999999999999964
No 48
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.94 E-value=7.5e-10 Score=138.33 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=99.7
Q ss_pred ceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchhhhhC
Q 000212 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN 497 (1850)
Q Consensus 418 P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~ 497 (1850)
-|+++|+.+|.+.+|++-....+.|.+..| .|.||-+||..... . +...... ..++. ..+ +...
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~-~-~y~~~~~----~~~~~----~~~-----~~~~ 331 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL-A-RYESWSS----SVTQS----EVF-----FGDK 331 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHHT----CSSGG----GSC-----GGGS
T ss_pred eEEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCccccc-c-ccccccc----CCccc----hhh-----hccc
Confidence 489999999999999999988888888888 99999999976431 1 1111111 00110 011 1122
Q ss_pred CCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhCCCCCC---CHHHHHHHHhc
Q 000212 498 GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVL---SHEELLCVVAK 571 (1850)
Q Consensus 498 GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~~f---s~~~Ll~~~a~ 571 (1850)
....++++|+|||.+++-.|-+|+++|..-+++.+-||.+..=++.-..+++.=+..+...-| -+++|+|-+|.
T Consensus 332 ~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~~~ 408 (488)
T 3kv5_D 332 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAK 408 (488)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHH
T ss_pred ccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHHHHHH
Confidence 347789999999999999999999999999999999999999888777666554444444443 34666676554
No 49
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.93 E-value=1.8e-10 Score=142.06 Aligned_cols=80 Identities=19% Similarity=0.363 Sum_probs=60.3
Q ss_pred cCCCceEEEeccCC----CCCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCCCCcCCCCCCCCCCCC
Q 000212 1705 RARSMLYCICRKPY----DEKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESSTPQNVDGGRTNAEFLE 1776 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~----~~~~mi~Cd~C~~WfH~~Cvgi~~~----~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~ 1776 (1850)
.+.+.+++.+.+.+ ++++||+||.|++|||+.|||+++. +++|+||.|...++++++ +++.+||++++.+
T Consensus 36 ~~~~~~~~s~kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~gps~~--k~~~~~~r~~~~~ 113 (528)
T 3pur_A 36 KEKEKPLMSKKKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTGHSIR--YKVVAPHRYRWYS 113 (528)
T ss_dssp ------CCSCCCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHCSCEE--CCCCCTTSSSTTC
T ss_pred hhhhhccccccccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCCCcce--eeccCcccccccc
Confidence 34456777775433 4588999999999999999999974 369999999999999888 6667799999888
Q ss_pred CCCCCCCCCc
Q 000212 1777 PKTPSPKHTN 1786 (1850)
Q Consensus 1777 p~~~~~~~~~ 1786 (1850)
+.+..++...
T Consensus 114 ~~~~~~~~~~ 123 (528)
T 3pur_A 114 PNEKHLGIEV 123 (528)
T ss_dssp GGGTTSCCCT
T ss_pred cccccCcccc
Confidence 8766655543
No 50
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.93 E-value=2.6e-10 Score=102.99 Aligned_cols=47 Identities=38% Similarity=1.167 Sum_probs=43.2
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|.|+|+|+.|..
T Consensus 5 ~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 5 EDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 5679999976 3699999999999999999999999999999999965
No 51
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.92 E-value=3.8e-10 Score=111.82 Aligned_cols=50 Identities=36% Similarity=0.955 Sum_probs=44.0
Q ss_pred CCCceEEEeccCCCCCCceeecCCCceEEcccccccC--CCCceecCCCcCC
Q 000212 1706 ARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS--APEIYICAACKPQ 1755 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~~--~~~~~~C~~C~~~ 1755 (1850)
+++.++|||+.++++++||+||.|+.|||+.|||+.. .|+.|+||.|.+.
T Consensus 25 ~~d~vrCiC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 25 GTDVTRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCCBCCCTTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCCCEEeECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 4456899999999989999999999999999999975 3579999999764
No 52
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.92 E-value=2.1e-10 Score=105.60 Aligned_cols=52 Identities=25% Similarity=0.883 Sum_probs=45.9
Q ss_pred hhhhhcccCCC--CCcceeccccCCCccccccCCCCCCC--C-CCCCCcccccccCC
Q 000212 246 DQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKH--V-PRGNWYCLECLNSD 297 (1850)
Q Consensus 246 ~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~--v-P~gdW~C~~C~~~~ 297 (1850)
+..|.+|+.+. +++.||+||+|+++||++|+.|||+. + |.|+|+|+.|....
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 56899999884 45889999999999999999999987 4 89999999998754
No 53
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.91 E-value=2.2e-10 Score=108.11 Aligned_cols=53 Identities=36% Similarity=0.940 Sum_probs=45.2
Q ss_pred cCCCceEE-EeccCCCCCCceeecCCCceEEcccccccCCC---CceecCCCcCCCC
Q 000212 1705 RARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAACKPQAE 1757 (1850)
Q Consensus 1705 ~~~~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~~~~---~~~~C~~C~~~~~ 1757 (1850)
.+.+..|| +|++++++++||+||.|++|||+.|||++..+ ..|+||.|.....
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34566899 99999988889999999999999999998753 5999999987433
No 54
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.91 E-value=2.9e-10 Score=102.91 Aligned_cols=48 Identities=35% Similarity=1.068 Sum_probs=43.8
Q ss_pred hhhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
.+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|+|+|+|+.|..
T Consensus 10 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 36689999975 4699999999999999999999999999999999975
No 55
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.87 E-value=6.5e-10 Score=124.24 Aligned_cols=50 Identities=42% Similarity=1.077 Sum_probs=42.5
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCC-CCccccccc
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1850)
+..|.+|+.+.+++.||+||+|+++||++||+|||+.+|+| +|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 34799999998889999999999999999999999999999 999999975
No 56
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.85 E-value=1.7e-10 Score=105.51 Aligned_cols=48 Identities=21% Similarity=0.663 Sum_probs=39.4
Q ss_pred CCceEEEeccCCCC-CCceeec-CCCceEEcccccccCC--------C-CceecCCCcC
Q 000212 1707 RSMLYCICRKPYDE-KAMIACY-QCDEWYHIDCVKLLSA--------P-EIYICAACKP 1754 (1850)
Q Consensus 1707 ~~~~yC~C~~~~~~-~~mi~Cd-~C~~WfH~~Cvgi~~~--------~-~~~~C~~C~~ 1754 (1850)
.....++|++|+++ ++||+|| .|++|||+.||||++. + ..|+||.|.+
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCccC
Confidence 34456799999875 7899999 9999999999999973 3 3999999963
No 57
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.83 E-value=5.8e-10 Score=103.71 Aligned_cols=49 Identities=41% Similarity=1.033 Sum_probs=44.1
Q ss_pred hhhhhcccCCC--CCcceeccccCCCccccccCCCCCCCCCCCCCcccccccC
Q 000212 246 DQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1850)
Q Consensus 246 ~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1850)
+..|.+|+.+. +++.||+||+|+.+||++|+.||. +|+|+|||+.|...
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 66 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCc
Confidence 56899999885 678999999999999999999984 99999999999763
No 58
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.82 E-value=1.2e-09 Score=111.44 Aligned_cols=48 Identities=38% Similarity=1.127 Sum_probs=45.2
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
.|.+|+...+++.||+||.|+++||++|++|||+.+|+|+|+|+.|..
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccc
Confidence 588999988888999999999999999999999999999999999965
No 59
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.80 E-value=7.2e-10 Score=107.54 Aligned_cols=51 Identities=39% Similarity=0.972 Sum_probs=45.4
Q ss_pred hhhhhhcccCCC--CCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 245 LDQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 245 ~~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
.+..|.+|+.+. +++.||+||+|+.+||++|+.||+ +|.|+|||+.|....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCcc
Confidence 356899999876 667999999999999999999985 999999999998754
No 60
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.79 E-value=4.1e-09 Score=129.82 Aligned_cols=142 Identities=13% Similarity=0.024 Sum_probs=102.9
Q ss_pred Ccccc----eeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhcccc
Q 000212 414 GVMVP----WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTML 489 (1850)
Q Consensus 414 Gv~~P----~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~ 489 (1850)
+...| |+|+|+.+|.+.+|++-....+.|.+..| .|.||-+||.... +. +.+..... .++ ...++
T Consensus 225 ~~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~s----~~~----~~~~~ 293 (447)
T 3kv4_A 225 VFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS----SNQ----NEMFF 293 (447)
T ss_dssp TSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHTC----SSG----GGSCG
T ss_pred hccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCccc-cc-chhhcccC----cch----hhhhc
Confidence 45667 89999999999999999999888888888 9999999999643 11 11111111 000 01111
Q ss_pred CchhhhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhCCCCC--CC-HHHHH
Q 000212 490 NPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAV--LS-HEELL 566 (1850)
Q Consensus 490 ~P~~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~~--fs-~~~Ll 566 (1850)
+ ......++++|+|||.+++-.|-+|+++|..-+++..-||.+..-++.-...++.=+..+...- || ++.++
T Consensus 294 -~----~~~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~ 368 (447)
T 3kv4_A 294 -G----DQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETIC 368 (447)
T ss_dssp -G----GGSSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHH
T ss_pred -c----ccccceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHH
Confidence 1 1234678999999999999999999999999999999999999988877765554444443332 43 46677
Q ss_pred HHHhc
Q 000212 567 CVVAK 571 (1850)
Q Consensus 567 ~~~a~ 571 (1850)
|-+|+
T Consensus 369 w~~~~ 373 (447)
T 3kv4_A 369 WYVGK 373 (447)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 61
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.77 E-value=2e-09 Score=121.11 Aligned_cols=52 Identities=33% Similarity=0.848 Sum_probs=46.1
Q ss_pred chhhhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
+..++.|.+|+.++ .+|+||+|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 4 d~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34467899999764 49999999999999999999999999999999998754
No 62
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.75 E-value=5.9e-10 Score=122.03 Aligned_cols=53 Identities=38% Similarity=1.012 Sum_probs=44.0
Q ss_pred cCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCC
Q 000212 1705 RARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAE 1757 (1850)
Q Consensus 1705 ~~~~~~yC~C~~~~~-~~~mi~Cd~C~~WfH~~Cvgi~~~----~~~~~C~~C~~~~~ 1757 (1850)
++++.+||+|++|++ +++||+||.|++|||+.|||++.. ++.|+||.|+....
T Consensus 4 ~~~~~~~C~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 4 GSDTKLYCICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp ---CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred CCCCCcEeeCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 346679999999986 578999999999999999999853 57999999997654
No 63
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.74 E-value=1.2e-09 Score=109.63 Aligned_cols=47 Identities=26% Similarity=0.788 Sum_probs=39.8
Q ss_pred EEEeccCCCC-CCceeec-CCCceEEcccccccC---------CCCceecCCCcCCCC
Q 000212 1711 YCICRKPYDE-KAMIACY-QCDEWYHIDCVKLLS---------APEIYICAACKPQAE 1757 (1850)
Q Consensus 1711 yC~C~~~~~~-~~mi~Cd-~C~~WfH~~Cvgi~~---------~~~~~~C~~C~~~~~ 1757 (1850)
..+|++|+++ +.||+|| .|++|||+.||||++ +.+.|+||.|.....
T Consensus 6 C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 6 CGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 4489999865 6899998 999999999999996 236999999997655
No 64
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.73 E-value=4.2e-09 Score=106.91 Aligned_cols=50 Identities=40% Similarity=1.038 Sum_probs=46.4
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
.|.+|+.+.+++.||+||.|+++||++|++|||+.+|+|+|+|+.|....
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 58899998888899999999999999999999999999999999998743
No 65
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.73 E-value=3.9e-09 Score=116.61 Aligned_cols=49 Identities=33% Similarity=0.914 Sum_probs=44.4
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
++.|.+|+.++ .+|+||+|+++||++|+.|||..+|+|+|+|+.|....
T Consensus 4 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 4 EDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 56799999763 49999999999999999999999999999999998754
No 66
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.72 E-value=5.3e-09 Score=106.28 Aligned_cols=48 Identities=38% Similarity=1.101 Sum_probs=43.4
Q ss_pred hhhcccCC-CCCcceeccccCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 248 ICEQCKSG-LHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 248 ~C~~C~~~-~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
.|.+|+.+ .+++.||+||.|+++||++||+|||..+|+|+|+|+.|..
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 58888864 5667899999999999999999999999999999999964
No 67
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.67 E-value=1e-07 Score=117.87 Aligned_cols=136 Identities=16% Similarity=0.052 Sum_probs=95.3
Q ss_pred ceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchH--HHHHHHHhhCCCcccCChhhhhhhccccCchhhh
Q 000212 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAG--AFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1850)
Q Consensus 418 P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~--kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~ 495 (1850)
-|+++|+.+|.+.+|++-....+.+++..| -|+||.+||.... .++.... .++ ...++. +.+
T Consensus 298 rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~nl~~y~~w~~--s~~-----------~~~wfg-d~l- 361 (528)
T 3pur_A 298 QFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQNFAAYQAHET--SPD-----------TTTWFG-DIA- 361 (528)
T ss_dssp SEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHH--SSC-----------CSCCGG-GGT-
T ss_pred EEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccchhhhhhhcc--CCc-----------hhhhhc-ccc-
Confidence 579999999999999999888777777777 9999999998643 2222211 110 111221 111
Q ss_pred hCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhH--HHH--HhhCCCC--CCC-HHHHHHH
Q 000212 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGA--DLY--QQYHKAA--VLS-HEELLCV 568 (1850)
Q Consensus 496 ~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~--~~y--~~~~~~~--~fs-~~~Ll~~ 568 (1850)
...+++++|.|||.+++-+|-+|+++|.--+++..-||.+..=++.....+ +.+ +..+... .|| ++.++|-
T Consensus 362 --~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~iE~~~~k~~~~~~kf~fp~F~~v~W~ 439 (528)
T 3pur_A 362 --NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFELLHWM 439 (528)
T ss_dssp --TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHHCCCTTCCCCTTHHHHHHH
T ss_pred --cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHHHHhhhhccCCCccccCcCHHHHHHH
Confidence 235678999999999999999999999999999999999998877665543 333 1223333 354 5667776
Q ss_pred Hhc
Q 000212 569 VAK 571 (1850)
Q Consensus 569 ~a~ 571 (1850)
.+.
T Consensus 440 y~~ 442 (528)
T 3pur_A 440 YMR 442 (528)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 68
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.66 E-value=8.6e-09 Score=114.13 Aligned_cols=49 Identities=29% Similarity=0.758 Sum_probs=44.2
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
++.|.+|+.++ .+|+||+|+++||++|+.|||+.+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 45799999774 49999999999999999999999999999999998754
No 69
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.65 E-value=1.2e-08 Score=97.19 Aligned_cols=68 Identities=19% Similarity=0.439 Sum_probs=53.6
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccccccccccCCCCcccCCCCCc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1523 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~~~~~~~~~~~~~~~rp~ 1523 (1850)
.+..+|+|...+..+..||+|+.|.+|||..||+++...+.....|+||.|....+. +....+.|||-
T Consensus 10 ~~~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~-------~~~K~~~~~~~ 77 (79)
T 1wep_A 10 LVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGP-------SIMKNWHSGPS 77 (79)
T ss_dssp CCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCS-------CBCCCCCCSCC
T ss_pred CCccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCC-------CceeeeccccC
Confidence 455789887666567899999999999999999988777766789999999665543 34456777773
No 70
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.63 E-value=5.9e-09 Score=98.32 Aligned_cols=57 Identities=26% Similarity=0.579 Sum_probs=48.1
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccccccc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1506 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~ 1506 (1850)
+.-+|+|..++.++..||+|+.|++|||+.||+++...+.....|+||.|....+.+
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~~ 65 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS 65 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCCC
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCCC
Confidence 446799987776788999999999999999999888777778899999997665443
No 71
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.62 E-value=5.1e-09 Score=114.65 Aligned_cols=49 Identities=35% Similarity=0.955 Sum_probs=41.5
Q ss_pred eEE-EeccCCCCC----CceeecCCCceEEcccccccCC--------C--CceecCCCcCCCCC
Q 000212 1710 LYC-ICRKPYDEK----AMIACYQCDEWYHIDCVKLLSA--------P--EIYICAACKPQAEE 1758 (1850)
Q Consensus 1710 ~yC-~C~~~~~~~----~mi~Cd~C~~WfH~~Cvgi~~~--------~--~~~~C~~C~~~~~~ 1758 (1850)
.|| +|+++|+++ +||+||.|++|||+.|||++.+ | ..|+||.|+..++.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 478 799999863 4999999999999999999862 2 28999999998773
No 72
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.62 E-value=8.8e-09 Score=97.16 Aligned_cols=51 Identities=27% Similarity=0.641 Sum_probs=47.0
Q ss_pred hhhhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccC
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1850)
...|.+|++..+++.|++||.|+.+||++|+.+++..+|.|+|+|+.|...
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp EECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 457999999988889999999999999999999999999999999999753
No 73
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.56 E-value=4.3e-08 Score=99.47 Aligned_cols=49 Identities=29% Similarity=0.674 Sum_probs=39.0
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1499 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C 1499 (1850)
....|..|........||.|+.|...||..|+++..... ....|.||.|
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~-~~~~W~C~~C 54 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPL-KRAGWQCPEC 54 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTT-TSTTCCCTTT
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccc-cccCccCCcC
Confidence 446799997665556789999999999999999664322 3468999999
No 74
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.54 E-value=3e-08 Score=90.66 Aligned_cols=55 Identities=27% Similarity=0.604 Sum_probs=44.2
Q ss_pred CCCccc-ccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000212 1449 VSMTLC-MCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1449 ~~~~~C-~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1503 (1850)
.+..+| +|-..+.++..||+|+.|.+|||+.||+++...+.....|+||.|...+
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 456789 5554444567899999999999999999887777777899999996544
No 75
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.49 E-value=5.9e-08 Score=98.61 Aligned_cols=50 Identities=26% Similarity=0.582 Sum_probs=38.6
Q ss_pred CCcccccccCC------CCccceeeccccccccccccCCCcccc--ccccccccCCcc
Q 000212 1450 SMTLCMCCESD------SKELEFLICSACKDCYHLQCLRPTEVD--RNHAEAYICPYC 1499 (1850)
Q Consensus 1450 ~~~~C~~c~~~------~~~~~~i~C~~C~~~yH~~Cv~~~~~~--~~~~~~~~Cp~C 1499 (1850)
...+|..|.+. ....++|.|+.|+..||.+|++..+.. .-....|.||.|
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 61 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIEC 61 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTT
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccC
Confidence 45778888765 345689999999999999999864332 223568999999
No 76
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.32 E-value=1.3e-07 Score=96.36 Aligned_cols=43 Identities=23% Similarity=0.723 Sum_probs=35.0
Q ss_pred EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCC
Q 000212 1713 ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1713 ~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~ 1755 (1850)
+|+++.+++.||.||.|+.|||..|++ ++..| ..|+|+.|...
T Consensus 63 ~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 63 LCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp TTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred cccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 455555667899999999999999999 66655 49999999753
No 77
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.31 E-value=1.8e-07 Score=87.56 Aligned_cols=57 Identities=19% Similarity=0.425 Sum_probs=43.2
Q ss_pred CCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000212 1446 HGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1446 ~~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1503 (1850)
.+..+...|+|...+..+..||+|+.|.+|||+.||+++... .....|+||.|....
T Consensus 11 ~~~~~~~~C~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~-~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 11 GVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNAD-ALPSKFLCFRCIELS 67 (72)
T ss_dssp SSCSSEECCTTCCCSCCSSCEEECSSSCEEEETTTTTCCTTS-CCCSCCCCHHHHHHC
T ss_pred CCCCcceEeeCCCccCCCCcEEECCCCCCccCCeeeccCccc-cCCCcEECCCccCCC
Confidence 334566889866554444579999999999999999977543 356899999996543
No 78
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.29 E-value=2.4e-07 Score=85.53 Aligned_cols=50 Identities=20% Similarity=0.628 Sum_probs=39.9
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1448 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1448 ~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
..+...|+|...+ .+..||+|+.|++|||++||+++... ....|+||.|.
T Consensus 16 ~~~~~~CiC~~~~-~~~~MIqCd~C~~WfH~~Cvgi~~~~--~~~~~~C~~C~ 65 (68)
T 3o70_A 16 FQGLVTCFCMKPF-AGRPMIECNECHTWIHLSCAKIRKSN--VPEVFVCQKCR 65 (68)
T ss_dssp TTTCCCSTTCCCC-TTCCEEECTTTCCEEETTTTTCCTTS--CCSSCCCHHHH
T ss_pred CCCceEeECCCcC-CCCCEEECCCCCccccccccCcCccc--CCCcEECCCCC
Confidence 3456789877544 46789999999999999999977653 34799999993
No 79
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.28 E-value=2e-07 Score=81.66 Aligned_cols=46 Identities=22% Similarity=0.639 Sum_probs=35.3
Q ss_pred cccccCCCCccceeecc-ccccccccccCCCccccccccccccCCccc
Q 000212 1454 CMCCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1454 C~~c~~~~~~~~~i~C~-~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
|+|..++.++..||+|+ .|.+|||+.||+++...+.. ..|+||.|.
T Consensus 6 c~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~-~~~~C~~C~ 52 (52)
T 2kgg_A 6 QNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAEN-EDYICINCA 52 (52)
T ss_dssp TTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHH-SCCCCSCC-
T ss_pred CCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCC-CCEECCCCC
Confidence 44544444567899999 89999999999977554433 899999993
No 80
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.27 E-value=3e-07 Score=92.04 Aligned_cols=47 Identities=34% Similarity=0.839 Sum_probs=41.1
Q ss_pred hhhhhhhcccCCCCCcceeccc--cCCCccccccCCCCCCCCCCCCCccccccc
Q 000212 244 ELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
..++.|.+|+.+ ..||+|| .|+++||++|+. |..+|+|+|+||.|.-
T Consensus 13 ~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 13 MHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQC 61 (107)
T ss_dssp SSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBC
T ss_pred CCCCCCCcCCCC---CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCC
Confidence 346789999854 4699999 899999999998 9999999999999864
No 81
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.26 E-value=2.7e-07 Score=80.79 Aligned_cols=46 Identities=22% Similarity=0.701 Sum_probs=37.7
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
-.|+|...+. +..||+|+.|++|||++||+++... ....|+||.|.
T Consensus 5 ~~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~--~~~~~~C~~C~ 50 (52)
T 3o7a_A 5 VTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKSN--VPEVFVCQKCR 50 (52)
T ss_dssp BCSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGGG--CCSSCCCHHHH
T ss_pred eEEEeCCcCC-CCCEEEcCCCCccccccccCCCccc--CCCcEECcCCC
Confidence 4599876554 6799999999999999999977653 34799999993
No 82
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.21 E-value=1.2e-07 Score=86.81 Aligned_cols=51 Identities=20% Similarity=0.561 Sum_probs=41.4
Q ss_pred CCcccccccCCC-Cccceeecc-ccccccccccCCCccccccccc-----cccCCccc
Q 000212 1450 SMTLCMCCESDS-KELEFLICS-ACKDCYHLQCLRPTEVDRNHAE-----AYICPYCQ 1500 (1850)
Q Consensus 1450 ~~~~C~~c~~~~-~~~~~i~C~-~C~~~yH~~Cv~~~~~~~~~~~-----~~~Cp~C~ 1500 (1850)
+..+|..|..++ ++..||.|+ .|++|||..||++++..+..+. .|+||.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 446788887765 466889999 9999999999999987776655 99999994
No 83
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.20 E-value=6.9e-07 Score=88.52 Aligned_cols=48 Identities=25% Similarity=0.674 Sum_probs=42.8
Q ss_pred hhhcccCCCCCcceeccccCCCccccccCCCCCCCCCCCCCcccccccCC
Q 000212 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1850)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1850)
.| +|+...+++.|+.||.|+..||+.|+.|++..+|+ +|+|+.|...+
T Consensus 30 rC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp CC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred Ee-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 47 79988888899999999999999999999999985 89999997644
No 84
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.20 E-value=2.1e-07 Score=88.01 Aligned_cols=52 Identities=25% Similarity=0.753 Sum_probs=41.2
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCcccccc----ccccccCCcccccc
Q 000212 1451 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN----HAEAYICPYCQYFE 1503 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~----~~~~~~Cp~C~~~~ 1503 (1850)
..+|+|...+ .+..||+|+.|.+|||+.||+++...+. ....|+||.|....
T Consensus 16 ~~~C~C~~~~-~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 16 ALYCICRQPH-NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCCSTTCCCC-CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCEEECCCcc-CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 4789876554 4668999999999999999998766543 35799999996544
No 85
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.12 E-value=7.9e-07 Score=77.46 Aligned_cols=43 Identities=33% Similarity=0.916 Sum_probs=36.5
Q ss_pred EeccCCCCCCceeecCCCceEEcccc--cccCCC-CceecCCCcCC
Q 000212 1713 ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1713 ~C~~~~~~~~mi~Cd~C~~WfH~~Cv--gi~~~~-~~~~C~~C~~~ 1755 (1850)
+|+++.+++.||.||.|+.|||..|+ +++..| ..|+|+.|...
T Consensus 5 vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 5 VCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp TTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 68888777789999999999999999 466655 49999999763
No 86
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.11 E-value=3.7e-07 Score=91.54 Aligned_cols=52 Identities=21% Similarity=0.588 Sum_probs=41.9
Q ss_pred cccccccCCC-Cccceeecc-ccccccccccCCCcccccccc-----ccccCCcccccc
Q 000212 1452 TLCMCCESDS-KELEFLICS-ACKDCYHLQCLRPTEVDRNHA-----EAYICPYCQYFE 1503 (1850)
Q Consensus 1452 ~~C~~c~~~~-~~~~~i~C~-~C~~~yH~~Cv~~~~~~~~~~-----~~~~Cp~C~~~~ 1503 (1850)
-+|..|..++ ++..||.|+ .|++|||+.||+++......+ ..|.||.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 3577776665 446899998 999999999999887766655 899999996654
No 87
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.05 E-value=1e-06 Score=96.56 Aligned_cols=50 Identities=20% Similarity=0.507 Sum_probs=39.2
Q ss_pred CcccccccCCCCccc----eeeccccccccccccCCCcccccccc------ccccCCccc
Q 000212 1451 MTLCMCCESDSKELE----FLICSACKDCYHLQCLRPTEVDRNHA------EAYICPYCQ 1500 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~----~i~C~~C~~~yH~~Cv~~~~~~~~~~------~~~~Cp~C~ 1500 (1850)
+++|..|...+.+.+ ||+|+.|.+|||++||+++...+... ..|+||.|.
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~ 61 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTC
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCC
Confidence 578987766666554 99999999999999999876444333 389999993
No 88
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.02 E-value=1.3e-06 Score=82.94 Aligned_cols=53 Identities=19% Similarity=0.476 Sum_probs=42.5
Q ss_pred CCCcccccccCCCCccceeecc--ccccccccccCCCccccc----cccccccCCccccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICS--ACKDCYHLQCLRPTEVDR----NHAEAYICPYCQYF 1502 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~--~C~~~yH~~Cv~~~~~~~----~~~~~~~Cp~C~~~ 1502 (1850)
.+...|+|... ..+..||+|+ .|..|||+.||+++...+ .....|.||.|...
T Consensus 14 ~~~~~CiC~~~-~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 14 EIKVRCVCGNS-LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCCSSCCC-CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCEEeECCCc-CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 35578987755 3566999999 999999999999776654 56789999999543
No 89
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.01 E-value=1.2e-06 Score=78.87 Aligned_cols=46 Identities=30% Similarity=0.782 Sum_probs=38.8
Q ss_pred hhhhhcccCCCCCcceeccccCC---CccccccCCCCCCCCCCCCCccccccc
Q 000212 246 DQICEQCKSGLHGEVMLLCDRCN---KGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1850)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd---~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1850)
...| +|++.+. +.|+.||+|+ ..||+.|+. |+.+|+|+|+||.|..
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 3467 8988765 4699999955 799999999 8899999999999964
No 90
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.00 E-value=3.9e-06 Score=78.12 Aligned_cols=50 Identities=24% Similarity=0.680 Sum_probs=37.8
Q ss_pred CCCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000212 1447 GSVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1447 ~~~~~~~C~~c~~~~~~~~~i~C~~--C~-~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+..+..+|+|...+. ..||.|+. |. +|||+.||+++. .. ...|.||.|..
T Consensus 12 d~~~~~~C~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~-~p--~g~w~Cp~C~~ 64 (71)
T 1wen_A 12 DPNEPTYCLCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTT-KP--RGKWFCPRCSQ 64 (71)
T ss_dssp CTTSCCCSTTCCCSC--SSEECCSCSSCSCCCEETTTTTCSS-CC--SSCCCCTTTSS
T ss_pred CCCCCCEEECCCCCC--CCEeEeeCCCCCCccEecccCCcCc-CC--CCCEECCCCCc
Confidence 345678998765443 57999999 77 899999999553 22 25799999954
No 91
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.99 E-value=3.9e-06 Score=81.55 Aligned_cols=53 Identities=25% Similarity=0.654 Sum_probs=39.9
Q ss_pred CCCCCCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000212 1444 KPHGSVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1444 ~~~~~~~~~~C~~c~~~~~~~~~i~C~~--C~-~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+.+..+..+|+|...+. ..||.|+. |. +|||+.||+++.. . ...|.||.|..
T Consensus 29 ~~~d~~e~~yCiC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~-p--~g~W~Cp~C~~ 84 (91)
T 1weu_A 29 MPVDPNEPTYCLCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTK-P--RGKWFCPRCSQ 84 (91)
T ss_dssp CCCCSCCCBCSTTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSC-C--CSSCCCTTTCC
T ss_pred CCcCCCCCcEEECCCCCC--CCEeEecCCCCCCCCEecccCCcCcC-C--CCCEECcCccC
Confidence 334456779998886554 47999999 76 9999999995532 2 36799999954
No 92
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.98 E-value=2.5e-06 Score=82.69 Aligned_cols=50 Identities=14% Similarity=0.486 Sum_probs=37.9
Q ss_pred CCCCCcccccccCCCCccceeeccccc---cccccccCCCccccccccccccCCc-ccc
Q 000212 1447 GSVSMTLCMCCESDSKELEFLICSACK---DCYHLQCLRPTEVDRNHAEAYICPY-CQY 1501 (1850)
Q Consensus 1447 ~~~~~~~C~~c~~~~~~~~~i~C~~C~---~~yH~~Cv~~~~~~~~~~~~~~Cp~-C~~ 1501 (1850)
+..+..+|+|...+.+ +||.||.|. +|||+.||+++.. . ...|.||. |..
T Consensus 22 ~~~~~~yCiC~~~~~g--~MI~CD~c~C~~eWfH~~CVgl~~~-p--~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYCFCRNVSYG--PMVACDNPACPFEWFHYGCVGLKQA-P--KGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCSTTTCCCSS--SEECCCSSSCSCSCEETTTSSCSSC-T--TSCCCSSHHHHH
T ss_pred CCCCCcEEEeCCCCCC--CEEEecCCCCccccCcCccCCCCcC-C--CCCccCChhhcc
Confidence 3456789988865554 699999987 9999999996532 2 25899999 963
No 93
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.94 E-value=1.8e-06 Score=77.43 Aligned_cols=48 Identities=25% Similarity=0.703 Sum_probs=36.4
Q ss_pred CCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~--C~-~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
++..+|+|...+. ..||.|+. |. +|||++||+++. ... ..|.||.|..
T Consensus 7 ~e~~yC~C~~~~~--g~mi~CD~~~C~~~wfH~~Cvgl~~-~p~--~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYCLCHQVSY--GEMIGCDNPDCPIEWFHFACVDLTT-KPK--GKWFCPRCVQ 57 (59)
T ss_dssp -CCEETTTTEECC--SEEEECSCTTCSSCEEETGGGTCSS-CCS--SCCCCHHHHC
T ss_pred CCCcEEECCCCCC--CCeeEeeCCCCCCCCEecccCCccc-CCC--CCEECcCccC
Confidence 4567898876554 47999999 77 899999999553 322 5799999953
No 94
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.92 E-value=2.2e-06 Score=77.65 Aligned_cols=49 Identities=24% Similarity=0.642 Sum_probs=36.7
Q ss_pred CCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000212 1448 SVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1448 ~~~~~~C~~c~~~~~~~~~i~C~~--C~-~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.+..+|+|...+. ..||.|+. |. +|||++||+++.. . ...|.||.|..
T Consensus 8 ~~e~~yC~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~-p--~~~w~Cp~C~~ 59 (62)
T 2g6q_A 8 PNEPTYCLCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYK-P--KGKWYCPKCRG 59 (62)
T ss_dssp --CCEETTTTEECC--SEEEECSCTTCSSCEEETGGGTCSSC-C--SSCCCCHHHHT
T ss_pred CCCCcEEECCCCCC--CCeeeeeCCCCCcccEecccCCcCcC-C--CCCEECcCccc
Confidence 35668898876554 37999999 55 9999999996532 2 46899999943
No 95
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.85 E-value=1.9e-06 Score=94.18 Aligned_cols=56 Identities=25% Similarity=0.677 Sum_probs=44.5
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000212 1448 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1448 ~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1503 (1850)
..+..+|+|..++..+..||+|+.|.+|||+.||++++..+.....|.||.|....
T Consensus 5 ~~~~~~C~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 5 SDTKLYCICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp --CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCcEeeCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 34567897766555577899999999999999999887766678899999996543
No 96
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.84 E-value=5.8e-06 Score=76.40 Aligned_cols=51 Identities=20% Similarity=0.552 Sum_probs=38.2
Q ss_pred CcccccccCCCCccceeeccc--cccccccccCCCcccccccc---ccccCCccccc
Q 000212 1451 MTLCMCCESDSKELEFLICSA--CKDCYHLQCLRPTEVDRNHA---EAYICPYCQYF 1502 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~~i~C~~--C~~~yH~~Cv~~~~~~~~~~---~~~~Cp~C~~~ 1502 (1850)
.-.|+|.. +..+..||+|+. |..|||+.||+++...+... ..|.||.|...
T Consensus 10 ~v~C~C~~-~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 10 KVRCICSS-TMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp EECCTTCC-CSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CEEeECCC-CcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 35698653 445668999995 99999999999765544433 57999999543
No 97
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.82 E-value=4e-06 Score=77.81 Aligned_cols=49 Identities=24% Similarity=0.570 Sum_probs=38.9
Q ss_pred CCCcccccccCCCCccceeeccccc---cccccccCCCccccccccccccCCccccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACK---DCYHLQCLRPTEVDRNHAEAYICPYCQYF 1502 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~---~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1502 (1850)
++..+|+|...+.+ .||.||.|. +|||+.||+++.. ....|.||.|...
T Consensus 4 ~~~~yC~C~~~~~g--~MI~CD~cdC~~~WfH~~Cvgl~~~---p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 4 GSSGYCICNQVSYG--EMVGCDNQDCPIEWFHYGCVGLTEA---PKGKWYCPQCTAA 55 (70)
T ss_dssp SCCCCSTTSCCCCS--SEECCSCTTCSCCCEEHHHHTCSSC---CSSCCCCHHHHHH
T ss_pred CCCeEEEcCCCCCC--CEeEeCCCCCCccCCcccccccCcC---CCCCEECCCCCcc
Confidence 45678998866544 899999984 9999999996542 2578999999654
No 98
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.79 E-value=4.2e-06 Score=75.67 Aligned_cols=49 Identities=27% Similarity=0.724 Sum_probs=38.4
Q ss_pred ccCCCceEE-EeccCCCCCCceeecCCCceEEccccccc--CCC-CceecCCCcCC
Q 000212 1704 LRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLL--SAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1704 ~~~~~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~--~~~-~~~~C~~C~~~ 1755 (1850)
..+....|| +|+++ +.||.||.|..|||..|++.. ..| ..|+|+.|...
T Consensus 6 ~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 6 YETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred ccCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 344556788 59863 579999999999999999984 334 59999999863
No 99
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.74 E-value=6.2e-06 Score=75.80 Aligned_cols=47 Identities=26% Similarity=0.716 Sum_probs=37.5
Q ss_pred CceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCCC
Q 000212 1708 SMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1708 ~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~~~ 1757 (1850)
+..+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+|+.|...+.
T Consensus 7 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 7 NEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 34566 68843 5799999999999999999 55555 5999999987555
No 100
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.73 E-value=4.1e-06 Score=77.97 Aligned_cols=51 Identities=20% Similarity=0.520 Sum_probs=41.3
Q ss_pred CCCceEEEeccCC--CCCCceeecCCCceEEcccccccCCCC-ceecCCCcCCC
Q 000212 1706 ARSMLYCICRKPY--DEKAMIACYQCDEWYHIDCVKLLSAPE-IYICAACKPQA 1756 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~--~~~~mi~Cd~C~~WfH~~Cvgi~~~~~-~~~C~~C~~~~ 1756 (1850)
.......+|+.+. +++.||.||.|+.|||..|+|+...|+ .|+|+.|....
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSR 67 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCcC
Confidence 3444566998775 457899999999999999999987664 99999998643
No 101
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.69 E-value=5.4e-06 Score=86.84 Aligned_cols=52 Identities=27% Similarity=0.714 Sum_probs=44.0
Q ss_pred chhhhhhhcccCCCCCcceeccccCCCccccccCCCCCC-----C--CCCCCCcccccccCC
Q 000212 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLK-----H--VPRGNWYCLECLNSD 297 (1850)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~-----~--vP~gdW~C~~C~~~~ 297 (1850)
+..++.|.+|+.|. .++.||.|.+.||..|+.|||. + .|.|+|+|+.|...+
T Consensus 60 Dg~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 60 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp TSCBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 44567899999874 4999999999999999999986 3 589999999998643
No 102
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.69 E-value=3.2e-06 Score=82.03 Aligned_cols=52 Identities=17% Similarity=0.482 Sum_probs=42.4
Q ss_pred CCCceEEEeccCC--CCCCceeecCCCceEEcccccccCCC-CceecCCCcCCCC
Q 000212 1706 ARSMLYCICRKPY--DEKAMIACYQCDEWYHIDCVKLLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1706 ~~~~~yC~C~~~~--~~~~mi~Cd~C~~WfH~~Cvgi~~~~-~~~~C~~C~~~~~ 1757 (1850)
+.+...++|+.+. ++..||.||.|+.|||..|+|+...| ..|+|+.|.....
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccc
Confidence 4455677998775 44679999999999999999998766 4999999987554
No 103
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=7.2e-06 Score=72.85 Aligned_cols=44 Identities=34% Similarity=1.014 Sum_probs=35.5
Q ss_pred CceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcC
Q 000212 1708 SMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKP 1754 (1850)
Q Consensus 1708 ~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~ 1754 (1850)
+..+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+|+.|..
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 34567 68854 4799999999999999999 55555 4999999964
No 104
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=97.66 E-value=0.00011 Score=88.49 Aligned_cols=138 Identities=13% Similarity=0.044 Sum_probs=98.9
Q ss_pred ceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchhhhhC
Q 000212 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN 497 (1850)
Q Consensus 418 P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~ 497 (1850)
-|+|+|+.+|.+.+|++-....+-|.+..| .|.||-+||.... +. +.+..... ..+.+ .++ + ..
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~s--~~~~e------~~~-~----~~ 212 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS--SNQNE------MFF-G----DQ 212 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHTS--TTGGG------SCG-G----GT
T ss_pred eEEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCccc-cc-cccccccC--Cccch------hhc-c----cc
Confidence 389999999999999999988888888888 9999999998753 21 11111110 00111 111 1 12
Q ss_pred CCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhCCCCC--CC-HHHHHHHHhc
Q 000212 498 GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAV--LS-HEELLCVVAK 571 (1850)
Q Consensus 498 GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~~--fs-~~~Ll~~~a~ 571 (1850)
....++++|+|||.+++-+|-+|+++|..-+++..-||.+..=++.-...++.=+..+...- || .+.++|-+|+
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~ 289 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGK 289 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHH
T ss_pred cCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999988877666554444444333 43 5677776665
No 105
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.66 E-value=7.4e-05 Score=89.00 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=83.2
Q ss_pred eeEEecCCcchHHHHHHHHhhCCCcc---cCChhhhhhhccccCchh----hhhCCCceeecccCCccEEEEcCCcccee
Q 000212 450 KCWYSVPGSEAGAFEKVMRSSLPDLF---DAQPDLLFQLVTMLNPSV----LVENGVPVYSVLQEPGNFVITFPRSYHAG 522 (1850)
Q Consensus 450 K~WY~VP~~~~~kfe~~~~~~~p~~~---~~~p~~l~~~~~~~~P~~----L~~~GIpv~~~~Q~pGefVvtfP~ayH~g 522 (1850)
-+|-...+.++.|+.+++++...++- ...-|-+|.+.+.++... ..+.||..+.++|+|||.|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHhhCCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHH
Confidence 78999999999999999998654321 122366788888898853 34589999999999999999999999999
Q ss_pred ecccccceeecccCCCCchhhhhhhHHHHHh
Q 000212 523 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQ 553 (1850)
Q Consensus 523 ~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~ 553 (1850)
.|.+-++..|+||..+.-+.....-.+.+|.
T Consensus 314 ~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred hcccchhhHhhhhcChhhHHHHHHHHHHHhh
Confidence 9999999999999999887665444444443
No 106
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=97.66 E-value=0.00014 Score=88.04 Aligned_cols=135 Identities=11% Similarity=0.053 Sum_probs=99.9
Q ss_pred eeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHH--HHHHHHhhCCCcccCChhhhhhhccccCchhhhh
Q 000212 419 WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGA--FEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVE 496 (1850)
Q Consensus 419 ~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~k--fe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~ 496 (1850)
|+|+|+.+|.+.+|++-....+.|.+..| .|.||-+||....- ++..... +. +.+ .++ ++
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl~~y~~~~~s--~~----~~e------~~~-~~---- 238 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANISLYERWRSA--SN----HSE------MFF-AD---- 238 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHHS--TT----GGG------SCG-GG----
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccccchhhcccC--cc----hhh------hhh-cc----
Confidence 89999999999999999888888888888 99999999987531 2221111 00 011 111 12
Q ss_pred CCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhCCCCC--C-CHHHHHHHHhc
Q 000212 497 NGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAV--L-SHEELLCVVAK 571 (1850)
Q Consensus 497 ~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~~--f-s~~~Ll~~~a~ 571 (1850)
.....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++....+++.=+..+...- | ..+.|+|-+|.
T Consensus 239 ~~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~wy~~~ 316 (392)
T 3pua_A 239 QVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGK 316 (392)
T ss_dssp GSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHHHHHH
T ss_pred cccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHHHHHH
Confidence 124668999999999999999999999999999999999999988887766654444443333 4 35677776665
No 107
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.62 E-value=8.4e-06 Score=73.48 Aligned_cols=43 Identities=37% Similarity=1.076 Sum_probs=34.8
Q ss_pred eEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCC
Q 000212 1710 LYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQ 1755 (1850)
Q Consensus 1710 ~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~ 1755 (1850)
.+| +|+++ +.||.||.|..|||..|++ ++..| ..|+|+.|...
T Consensus 6 ~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 6 DFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp SSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 345 68753 5799999999999999999 55555 49999999753
No 108
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.57 E-value=2.1e-05 Score=71.14 Aligned_cols=47 Identities=30% Similarity=0.873 Sum_probs=36.7
Q ss_pred CCceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCC
Q 000212 1707 RSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQA 1756 (1850)
Q Consensus 1707 ~~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~~ 1756 (1850)
.+..+| +|+. ++.||.||.|..+||..|++ ++..| ..|+|+.|....
T Consensus 7 ~~~~~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCC---CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 344566 6874 45799999999999999999 55545 499999998643
No 109
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.56 E-value=1.7e-05 Score=79.48 Aligned_cols=45 Identities=24% Similarity=0.558 Sum_probs=36.9
Q ss_pred CCceEEEeccCCCCCCceeec--CCCceEEcccccccCCCC-ceecCCCc
Q 000212 1707 RSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSAPE-IYICAACK 1753 (1850)
Q Consensus 1707 ~~~~yC~C~~~~~~~~mi~Cd--~C~~WfH~~Cvgi~~~~~-~~~C~~C~ 1753 (1850)
.+..||.+-+ +++.||.|| .|..|||..|+|++..|+ .|+||.|.
T Consensus 13 ~~~~~C~~C~--~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 13 MHEDYCFQCG--DGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQ 60 (107)
T ss_dssp SSCSSCTTTC--CCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGB
T ss_pred CCCCCCCcCC--CCCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCC
Confidence 4456887543 456799999 899999999999998775 99999875
No 110
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.54 E-value=0.00015 Score=88.00 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=97.9
Q ss_pred eeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchhhhhCC
Q 000212 419 WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498 (1850)
Q Consensus 419 ~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~~~G 498 (1850)
|+++|+.+|.+.+|++-....+.|.+..| .|.||-+||..... .+...... ..+ +...++ +. ..
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl--~ly~~~~~----s~~----~~e~~~-~~----~~ 241 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWSS----SVT----QSEVFF-GD----KV 241 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHHT----SGG----GGGSCG-GG----GS
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCccccc--cccccccc----CCC----cchhhh-cc----cc
Confidence 89999999999999999999888998888 99999999987541 11111110 000 001111 11 22
Q ss_pred CceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhCCCCCC---CHHHHHHHHhc
Q 000212 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVL---SHEELLCVVAK 571 (1850)
Q Consensus 499 Ipv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~~f---s~~~Ll~~~a~ 571 (1850)
...++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++.-..+++.=...+...-| -.+.|+|-+|.
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w~~a~ 317 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAK 317 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999887766655443333333333 34556665554
No 111
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.52 E-value=2.8e-05 Score=80.95 Aligned_cols=35 Identities=34% Similarity=0.915 Sum_probs=30.1
Q ss_pred ceeecCCCceEEcccccccCC--------C--CceecCCCcCCCC
Q 000212 1723 MIACYQCDEWYHIDCVKLLSA--------P--EIYICAACKPQAE 1757 (1850)
Q Consensus 1723 mi~Cd~C~~WfH~~Cvgi~~~--------~--~~~~C~~C~~~~~ 1757 (1850)
||+||.|++|||+.|+|++.+ + ..|.||.|.....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 999999999999999999852 2 3799999987654
No 112
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.48 E-value=8.2e-05 Score=70.33 Aligned_cols=64 Identities=23% Similarity=0.481 Sum_probs=47.7
Q ss_pred ccceeeec------CCCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1436 HRSLYIYN------KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1436 ~~~~~~~~------~~~~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
+++.++|- ..+.|.+- .|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 6 ~~~~~~~c~~C~~~~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 6 SGRNDTECDLCGGDPEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp CCCCCCCCTTTCSCSSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred cccCCccChhhcCCCCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 34456662 34445444 677787666778999999999999999999766665555589999994
No 113
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.45 E-value=0.00051 Score=85.01 Aligned_cols=136 Identities=12% Similarity=-0.019 Sum_probs=95.4
Q ss_pred ceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHH--HHHHHhhCCCcccCChhhhhhhccccCchhhh
Q 000212 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAF--EKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1850)
Q Consensus 418 P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kf--e~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~ 495 (1850)
-|+++|+.+|.+.+|++-....+.|.+..| .|.|+.+||...... ..... .+ .+.+. + -|+.
T Consensus 198 r~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~~y~~~~~--s~----~q~~~------~-~p~~-- 261 (451)
T 2yu1_A 198 KYCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLELYENWLL--SG----SQGDI------F-LGDR-- 261 (451)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHHHHHHHHH--TT----CCSSS------C-HHHH--
T ss_pred eEEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCcccccccccccc--cc----cchhh------h-hccc--
Confidence 488999999999999999888888888887 899999999985421 11110 01 11111 1 1222
Q ss_pred hCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhhhhhhHHHHHhhC--CCCCCC-HHHHHHHHhc
Q 000212 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYH--KAAVLS-HEELLCVVAK 571 (1850)
Q Consensus 496 ~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~--~~~~fs-~~~Ll~~~a~ 571 (1850)
.-..+++++.|||.+++-.|-+|+++|..-+++.+.||.+..=++.-....+.=...+ ..-.|| ++.|+|-+|.
T Consensus 262 --~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w~~~~ 338 (451)
T 2yu1_A 262 --VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLE 338 (451)
T ss_dssp --SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHH
T ss_pred --cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHHHHHH
Confidence 1246789999999999999999999999999999999999888776554443222233 333344 4567775553
No 114
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.37 E-value=7e-05 Score=73.28 Aligned_cols=57 Identities=25% Similarity=0.647 Sum_probs=45.5
Q ss_pred CCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000212 1445 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1502 (1850)
Q Consensus 1445 ~~~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1502 (1850)
++++.+...|..|........||.|+.|..+||..|++|.+.... ...|.||.|...
T Consensus 10 ~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P-~g~W~C~~C~~~ 66 (92)
T 2e6r_A 10 SAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIP-RGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCC-SSCCCCHHHHHH
T ss_pred hhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCC-CCCcCCccCcCc
Confidence 455677789999977766778999999999999999996544333 358999999764
No 115
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.30 E-value=0.00018 Score=66.75 Aligned_cols=55 Identities=22% Similarity=0.587 Sum_probs=43.2
Q ss_pred CCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1445 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1445 ~~~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
++.|.+= .|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 13 ~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 13 NRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp TSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTS
T ss_pred CeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCcc
Confidence 3444444 677776666778999999999999999999776666555599999995
No 116
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.29 E-value=7.3e-05 Score=68.57 Aligned_cols=43 Identities=23% Similarity=0.556 Sum_probs=33.6
Q ss_pred EEEeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCC
Q 000212 1711 YCICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQA 1756 (1850)
Q Consensus 1711 yC~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~~ 1756 (1850)
.-+|+ +++.||.||.|+.|||..|++ +...| ..|+|+.|+...
T Consensus 15 C~vC~---~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 15 CGVCG---DGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTTS---CCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred cCCCC---CCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 44776 345699999999999999996 44555 489999998643
No 117
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=97.26 E-value=0.00018 Score=77.70 Aligned_cols=49 Identities=14% Similarity=0.360 Sum_probs=34.4
Q ss_pred CceEEEeccCCCC-CCceeecCCCceEEcccccccC---CC-C---ceecCCCcCCC
Q 000212 1708 SMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLS---AP-E---IYICAACKPQA 1756 (1850)
Q Consensus 1708 ~~~yC~C~~~~~~-~~mi~Cd~C~~WfH~~Cvgi~~---~~-~---~~~C~~C~~~~ 1756 (1850)
...||.|+.|.+. ..|++|+.|..|||..|++... .+ + .|+|..|....
T Consensus 4 ~~~yCYCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 4 QAGSVDEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eeeEEEcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 3579999988775 6699999999999999998654 22 3 78899998754
No 118
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.23 E-value=0.0002 Score=85.98 Aligned_cols=117 Identities=21% Similarity=0.222 Sum_probs=85.5
Q ss_pred cceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCccc-----CChhhhhhhccccCc
Q 000212 417 VPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFD-----AQPDLLFQLVTMLNP 491 (1850)
Q Consensus 417 ~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~-----~~p~~l~~~~~~~~P 491 (1850)
..|+|+|..+|.+.+|.+.....+++.+..| .|.|+.+|+.....+-. .+.... ...+++.. .-|
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~-----~~~~~~~~~~~~~~~w~~~----~~P 242 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIK-----VTRDEGGNQQDEAITWFNV----IYP 242 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHC-----CCHHHHGGGTTCHHHHHHH----TGG
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhccc-----CcccccCCCccchhhhhhh----hCc
Confidence 4688999999999999999888888888887 89999999997543321 110000 00111110 112
Q ss_pred hhhhh---CCCceeecccCCccEEEEcCCccceeecccccceeecccCCCCchhh
Q 000212 492 SVLVE---NGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543 (1850)
Q Consensus 492 ~~L~~---~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~Wl~~ 543 (1850)
..-.. .+.+.+.++|+|||.+++-+|-+|++.|.+-+++.++||.++..++.
T Consensus 243 ~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 243 RTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV 297 (336)
T ss_dssp GGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHH
T ss_pred chhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHH
Confidence 21110 24678899999999999999999999999999999999999977654
No 119
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.23 E-value=0.00011 Score=76.58 Aligned_cols=39 Identities=21% Similarity=0.528 Sum_probs=31.6
Q ss_pred ceeeccccccccccccCCCcc------ccccccccccCCcccccc
Q 000212 1465 EFLICSACKDCYHLQCLRPTE------VDRNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1465 ~~i~C~~C~~~yH~~Cv~~~~------~~~~~~~~~~Cp~C~~~~ 1503 (1850)
.||.|+.|+||||.+|+++.. ........|.||.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 389999999999999999664 343456689999997654
No 120
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.19 E-value=2.6e-05 Score=80.39 Aligned_cols=51 Identities=27% Similarity=0.802 Sum_probs=42.5
Q ss_pred chhhhhhhcccCCCCCcceeccccCCCccccccCCCCC-----CCC--CCCCCcccccccC
Q 000212 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPL-----KHV--PRGNWYCLECLNS 296 (1850)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL-----~~v--P~gdW~C~~C~~~ 296 (1850)
+..++.|.+|+.| ..++.||.|.+.||..|+.|++ .++ |.|+|+|+.|...
T Consensus 54 Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 3446679999877 3589999999999999999984 455 8999999999764
No 121
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.13 E-value=9.2e-05 Score=67.90 Aligned_cols=49 Identities=24% Similarity=0.592 Sum_probs=38.1
Q ss_pred ceEEEeccCCC--CCCceeecCCCceEEcccccccC------CCCceecCCCcCCCC
Q 000212 1709 MLYCICRKPYD--EKAMIACYQCDEWYHIDCVKLLS------APEIYICAACKPQAE 1757 (1850)
Q Consensus 1709 ~~yC~C~~~~~--~~~mi~Cd~C~~WfH~~Cvgi~~------~~~~~~C~~C~~~~~ 1757 (1850)
....+|+.+++ ++.||.||.|+.+||..|++..- +...|+|+.|.....
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 34458987743 47899999999999999999742 335899999986443
No 122
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=96.98 E-value=0.00057 Score=64.53 Aligned_cols=56 Identities=21% Similarity=0.567 Sum_probs=44.6
Q ss_pred CCCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1444 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1444 ~~~~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.++.|..= .|..|........++.|+.|..+||+.|+.|.+........|.||.|.
T Consensus 20 ~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 20 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred CCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 44555555 577777777778899999999999999999776666666569999994
No 123
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=96.92 E-value=0.00026 Score=79.53 Aligned_cols=47 Identities=28% Similarity=0.808 Sum_probs=36.1
Q ss_pred CceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCCC
Q 000212 1708 SMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1708 ~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvg--i~~~~-~~~~C~~C~~~~~ 1757 (1850)
+.-+| +|+++ +.||.||.|..|||..|++ ++..| ..|+||.|.....
T Consensus 6 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 33456 78744 4599999999999999994 45544 4899999997554
No 124
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.86 E-value=0.0012 Score=74.39 Aligned_cols=109 Identities=16% Similarity=0.130 Sum_probs=73.9
Q ss_pred ccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchh--
Q 000212 416 MVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV-- 493 (1850)
Q Consensus 416 ~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~-- 493 (1850)
..+++|+|..+|.+.+|.+.. .+++.+..| .|.|..+|+++...+ +|...... .-...+-...|+.
T Consensus 124 ~~~~~wiG~~gs~t~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l-------~~~~~~~~--~~~s~vd~~~~d~~~ 191 (235)
T 4gjz_A 124 ITINAWFGPQGTISPLHQDPQ--QNFLVQVMG-RKYIRLYSPQESGAL-------YPHDTHLL--HNTSQVDVENPDLEK 191 (235)
T ss_dssp CEEEEEEECTTCEEEEECCSS--EEEEEEEES-CEEEEEECGGGGGGS-------CBCSSTTT--TTBBSSCTTSCCTTT
T ss_pred cceEEEEeCCCCCceeeeccc--cceEEEEee-eEeeEEcCccccccc-------ccCccccc--CccccccccCcchhh
Confidence 346799999999999999875 456666666 999999999886543 22110000 0000011111110
Q ss_pred -hhhCCCceeecccCCccEEEEcCCccceeecccccceeecccC
Q 000212 494 -LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 536 (1850)
Q Consensus 494 -L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa 536 (1850)
=.-.+.+.+.++|+|||.+++-+|-+|.+.|.+.+++.+++|+
T Consensus 192 ~p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 192 FPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp CGGGGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred CccccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 0113467899999999999999999999999999887776653
No 125
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.70 E-value=0.00081 Score=75.52 Aligned_cols=48 Identities=25% Similarity=0.731 Sum_probs=36.3
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 677786666678899999999999999999766665555589999994
No 126
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.24 E-value=0.0044 Score=59.82 Aligned_cols=51 Identities=29% Similarity=0.806 Sum_probs=39.3
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1503 (1850)
....+|..|... ..++.|+.|...||..|+.|.+.... ...|.||.|....
T Consensus 23 ~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P-~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 23 DSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVP-GEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCC-SSSCCCCSCCCCC
T ss_pred CCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCc-CCCcCCccccCCC
Confidence 445789999533 36999999999999999986654433 3589999997643
No 127
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.00 E-value=0.0031 Score=64.25 Aligned_cols=36 Identities=25% Similarity=0.740 Sum_probs=28.7
Q ss_pred CCceeecCCCceEEcccccccCC-------CCceecCCCcCCC
Q 000212 1721 KAMIACYQCDEWYHIDCVKLLSA-------PEIYICAACKPQA 1756 (1850)
Q Consensus 1721 ~~mi~Cd~C~~WfH~~Cvgi~~~-------~~~~~C~~C~~~~ 1756 (1850)
..||+|+.|++|||..|+++..+ ++.|.||.|.+.+
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 46999999999999999998642 3579999999754
No 128
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.94 E-value=0.0049 Score=74.55 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=73.1
Q ss_pred cccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchh-
Q 000212 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV- 493 (1850)
Q Consensus 415 v~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~- 493 (1850)
+.+.++++|..+|.+.+|.+.+ .+++.+..| .|.|.-+|+.....+ +|.... .+.--...+.+-.|+.
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~l-------y~~~~~-~~~~~~s~vd~~~~d~~ 250 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECL-------YPYPVH-HPCDRQSQVDFDNPDYE 250 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHH-------CBBCTT-STTBTBBCSCTTSCCTT
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhh-------cccccc-CCCCCcccccCCCcchh
Confidence 4567899999999999999765 566677777 999999999986543 111000 0000000001111210
Q ss_pred --hhhCCCceeecccCCccEEEEcCCccceeeccc-ccceeeccc
Q 000212 494 --LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG-LNCAEAVNF 535 (1850)
Q Consensus 494 --L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G-~n~~eavNf 535 (1850)
-.-.+.+.+.++++|||.+++-+|-+|.+.|.+ -.++.||||
T Consensus 251 ~~p~~~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 251 RFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp TCGGGGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred hCcccccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 001235789999999999999999999999986 456666776
No 129
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.87 E-value=0.0014 Score=61.50 Aligned_cols=51 Identities=25% Similarity=0.572 Sum_probs=41.4
Q ss_pred hhhhhhcccCCCCCcceeccccCCCccccccCCCC------------CCCCCCCCCcccccccC
Q 000212 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP------------LKHVPRGNWYCLECLNS 296 (1850)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PP------------L~~vP~gdW~C~~C~~~ 296 (1850)
.|+.|.+|..-. .+.++-|..|.+.||..||.++ +...+.+-|.|+.|.+-
T Consensus 14 ~D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 367899998554 3568899999999999999876 55667788999999663
No 130
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.74 E-value=0.0022 Score=62.25 Aligned_cols=53 Identities=21% Similarity=0.578 Sum_probs=40.4
Q ss_pred CcccccccCCCC--ccceeeccccccccccccCCCcccc---ccccccccCCcccccc
Q 000212 1451 MTLCMCCESDSK--ELEFLICSACKDCYHLQCLRPTEVD---RNHAEAYICPYCQYFE 1503 (1850)
Q Consensus 1451 ~~~C~~c~~~~~--~~~~i~C~~C~~~yH~~Cv~~~~~~---~~~~~~~~Cp~C~~~~ 1503 (1850)
..+|..|..... +..++.|+.|...||..|++|.+.. .--...|.|+.|....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 467998865433 4789999999999999999976553 2345689999996643
No 131
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=95.72 E-value=0.0073 Score=66.46 Aligned_cols=49 Identities=29% Similarity=0.790 Sum_probs=38.1
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFES 1504 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~ 1504 (1850)
.+|..|.. ++.++.|+.|..+||..|+.|...... ...|.||.|.....
T Consensus 5 ~~C~~C~~---~g~ll~Cd~C~~~~H~~C~~p~l~~~p-~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 5 DWCAVCQN---GGELLCCEKCPKVFHLSCHVPTLTNFP-SGEWICTFCRDLSK 53 (184)
T ss_dssp SSCTTTCC---CSSCEECSSSSCEECTTTSSSCCSSCC-SSCCCCTTTSCSSS
T ss_pred CccccCCC---CCeeeecCCCCcccCccccCCCCCCCC-CCCEECccccCccc
Confidence 67998852 245999999999999999987655433 34699999987654
No 132
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.47 E-value=0.017 Score=69.60 Aligned_cols=111 Identities=12% Similarity=0.055 Sum_probs=76.4
Q ss_pred cccceeeecccccccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhh-CCCcccCChhhhhhhccccCchh
Q 000212 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSS-LPDLFDAQPDLLFQLVTMLNPSV 493 (1850)
Q Consensus 415 v~~P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~-~p~~~~~~p~~l~~~~~~~~P~~ 493 (1850)
+..+++++|..++.+.+|.+.+ .+++.+..| .|.|..+|+.....+-..-... ..+ -..||+ -.-|.
T Consensus 166 ~~~s~l~~g~~g~~~~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~ly~~~~~~~~~d--~~~~d~------~~~p~- 233 (338)
T 3al5_A 166 FFSSVFRISSPGLQLWTHYDVM--DNLLIQVTG-KKRVVLFSPRDAQYLYLKGTKSEVLN--IDNPDL------AKYPL- 233 (338)
T ss_dssp EEEEEEEEECTTCEEEEECCSS--EEEEEECSS-CEEEEEECGGGGGGGTEETTEESCCC--SSSCCT------TTCTT-
T ss_pred cccceeEECCCCCCccceECCc--ccEEEEEEE-EEEEEEECcccccccccCCCCccccc--CCCcch------hhCcc-
Confidence 3456899999999999999775 355566666 9999999998764331000000 000 001221 01122
Q ss_pred hhhCCCceeecccCCccEEEEcCCccceeecccccceeecccCCCC
Q 000212 494 LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPAD 539 (1850)
Q Consensus 494 L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G~n~~eavNfa~~~ 539 (1850)
+ .+.+.+.++++|||.+++-+|-+|.+.|.+.+++.+++|....
T Consensus 234 ~--~~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 234 F--SKARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp G--GGCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred c--ccCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 1 1357899999999999999999999999999999998886643
No 133
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=94.72 E-value=0.014 Score=64.61 Aligned_cols=42 Identities=29% Similarity=0.846 Sum_probs=33.6
Q ss_pred EeccCCCCCCceeecCCCceEEcccc--cccCCC-CceecCCCcCCCC
Q 000212 1713 ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAP-EIYICAACKPQAE 1757 (1850)
Q Consensus 1713 ~C~~~~~~~~mi~Cd~C~~WfH~~Cv--gi~~~~-~~~~C~~C~~~~~ 1757 (1850)
+|+ .++.++.||.|...||..|+ +++..| ..|+|+.|.....
T Consensus 7 ~C~---~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 7 VCQ---KPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp TTC---CCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred cCC---CCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 566 34569999999999999999 566655 5999999987643
No 134
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=92.20 E-value=0.044 Score=55.71 Aligned_cols=40 Identities=25% Similarity=0.511 Sum_probs=31.3
Q ss_pred CcceeccccCCCccccccCCCCCCCCCCC----CCcccccccCC
Q 000212 258 GEVMLLCDRCNKGWHVYCLSPPLKHVPRG----NWYCLECLNSD 297 (1850)
Q Consensus 258 ~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g----dW~C~~C~~~~ 297 (1850)
++.|+.|+.|+..||..|+.++.+.++.+ .|+|+.|...+
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 45688999999999999999887665544 49999998654
No 135
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=91.38 E-value=0.11 Score=56.23 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=33.4
Q ss_pred cccccccCCCCccceeeccccccccccccCCCcccccc---ccccccCCcccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN---HAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~---~~~~~~Cp~C~~ 1501 (1850)
..|-|=.+.--...|++|+.|..|||.+|++...++.- .--.++|..|..
T Consensus 6 ~yCYCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 6 GSVDEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred eEEEcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 35666555556778999999999999999995543332 245567999944
No 136
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=87.25 E-value=0.44 Score=56.47 Aligned_cols=85 Identities=14% Similarity=0.148 Sum_probs=52.8
Q ss_pred ccCCCCchHHHHHHHHhh----hccceeeecCCCCCCCCcccccccCCCCc-cce--eecc--ccccccccccCCCcccc
Q 000212 1417 SVGDKNSLLGLLQKIKQS----VHRSLYIYNKPHGSVSMTLCMCCESDSKE-LEF--LICS--ACKDCYHLQCLRPTEVD 1487 (1850)
Q Consensus 1417 ~~~~~~sl~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~C~~c~~~~~~-~~~--i~C~--~C~~~yH~~Cv~~~~~~ 1487 (1850)
+=+.+.|++.-|+.|++. .+....--++..+......|++|.+...+ ..+ ..|. .|++.||..|+-.=...
T Consensus 270 ~Wd~d~si~eNL~~IL~i~~fP~p~~~~~~~~~e~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs 349 (381)
T 3k1l_B 270 NWDSEMNIHKNLLRMFDLCYFPMPDWSDGPKLDEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKT 349 (381)
T ss_dssp TCCTTSCHHHHHHHHTTCSSCCCCCGGGCCSCTTCCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHH
T ss_pred hcCccCCHHHHHHHHhCccccCCCcccccccccccccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHh
Confidence 334678999999999776 12222100111223456889999988877 333 5798 89999999999622211
Q ss_pred c---c---ccccccCCcccc
Q 000212 1488 R---N---HAEAYICPYCQY 1501 (1850)
Q Consensus 1488 ~---~---~~~~~~Cp~C~~ 1501 (1850)
. + +.-.-.||+|..
T Consensus 350 ~~~sRqSFnvi~G~CPyCr~ 369 (381)
T 3k1l_B 350 LMDGKTFLEVSFGQCPFCKA 369 (381)
T ss_dssp HHSSSCTTTCCEEECTTTCC
T ss_pred CCCccccccccCCCCCCCCC
Confidence 1 1 122247999954
No 137
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=85.02 E-value=1.7 Score=52.24 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=72.5
Q ss_pred ceeeecccccccceEecCCCcceeeeeecCCCeeEEec-CCcchHHHHHHHHhhCCCcccCC---h-hhhhhhccccCch
Q 000212 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV-PGSEAGAFEKVMRSSLPDLFDAQ---P-DLLFQLVTMLNPS 492 (1850)
Q Consensus 418 P~lyvGm~fS~~~WH~Ed~~l~SiNy~h~G~~K~WY~V-P~~~~~kfe~~~~~~~p~~~~~~---p-~~l~~~~~~~~P~ 492 (1850)
+-+|+|-.++.+..|.+++. .+..+..| .|.|... |+.....+ .+.-.... | ++......-+ |.
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~-p~ 211 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNPM-------QHYDLSEAPYYPDDLQSYWKGDP-PK 211 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSCS-------SCEECC----CCHHHHHHCCSCC-CC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCcccccc-------Ccccccccccccccccccchhhc-cc
Confidence 34899988999999998654 34445556 8999999 77642111 11000000 0 0000000000 11
Q ss_pred hhhhCCCceeecccCCccEEEEcCCccceeeccc--ccceeecccCCCCchhhhhhhH
Q 000212 493 VLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG--LNCAEAVNFAPADWLPHGGFGA 548 (1850)
Q Consensus 493 ~L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G--~n~~eavNfa~~~Wl~~g~~~~ 548 (1850)
+ ...+.+.++-+|||.++.-+|..|.+.+.| -+++-++| .++|..+.....
T Consensus 212 -~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l 264 (342)
T 1vrb_A 212 -E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAAL 264 (342)
T ss_dssp -T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHH
T ss_pred -c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHH
Confidence 1 226788999999999999999999999993 67777777 788977655433
No 138
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=84.97 E-value=0.38 Score=45.42 Aligned_cols=52 Identities=23% Similarity=0.594 Sum_probs=40.3
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCc-----------cccccccccccCCccccc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT-----------EVDRNHAEAYICPYCQYF 1502 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~-----------~~~~~~~~~~~Cp~C~~~ 1502 (1850)
....|-.|. ......++.|-+|...||..|++.. ..+|.+..-|.|++|.-+
T Consensus 14 ~D~~C~VC~-~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCE-VWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTC-CCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCccc-cccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 447799983 4457788999999999999999831 245667778999999554
No 139
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=81.85 E-value=0.31 Score=50.34 Aligned_cols=47 Identities=19% Similarity=0.539 Sum_probs=36.5
Q ss_pred CCCceEE-EeccCCCCCCceeecCCCceEEccccccc-------C---CCCceecCCCcCC
Q 000212 1706 ARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLL-------S---APEIYICAACKPQ 1755 (1850)
Q Consensus 1706 ~~~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~-------~---~~~~~~C~~C~~~ 1755 (1850)
|....|| +|. +++..|.||.|..=||..|+... + +.+.|+|+.|...
T Consensus 54 Dg~~~~C~vC~---dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCA---EGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTC---CCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecC---CCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 3445576 566 66789999999999999999842 2 4579999999764
No 140
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.74 E-value=0.34 Score=44.82 Aligned_cols=49 Identities=24% Similarity=0.577 Sum_probs=37.8
Q ss_pred CCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1447 GSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1447 ~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
...+...|.+|..++.....+..--|++.||..|+..-... ...||.|.
T Consensus 19 ~~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~-----~~~CP~Cr 67 (75)
T 1x4j_A 19 HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA-----NRTCPICR 67 (75)
T ss_dssp CSSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH-----CSSCTTTC
T ss_pred ccCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc-----CCcCcCcC
Confidence 34556789999988887777777779999999999854332 35899994
No 141
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=80.15 E-value=0.49 Score=42.91 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=35.2
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.....|.+|...+.....+..-.|++.||..|+...... ...||.|..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~ 59 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT-----NKKCPICRV 59 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc-----CCCCcCcCc
Confidence 445789999888876655666679999999999844322 235999943
No 142
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=75.43 E-value=1.1 Score=38.64 Aligned_cols=45 Identities=20% Similarity=0.459 Sum_probs=32.5
Q ss_pred CcccccccCCCCccce-eeccccccccccccCCCccccccccccccCCccc
Q 000212 1451 MTLCMCCESDSKELEF-LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~~-i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
...|.+|..++.+... .....|++.||..|+..-... ...||.|.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~-----~~~CP~Cr 50 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS-----HSTCPLCR 50 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT-----CCSCSSSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc-----CCcCcCCC
Confidence 4569999888877554 333469999999999844322 45799993
No 143
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=74.47 E-value=1.2 Score=46.69 Aligned_cols=47 Identities=19% Similarity=0.532 Sum_probs=35.9
Q ss_pred CCCceEE-EeccCCCCCCceeecCCCceEEccccccc----------CCCCceecCCCcCC
Q 000212 1706 ARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLL----------SAPEIYICAACKPQ 1755 (1850)
Q Consensus 1706 ~~~~~yC-~C~~~~~~~~mi~Cd~C~~WfH~~Cvgi~----------~~~~~~~C~~C~~~ 1755 (1850)
|...-|| +|. +++..+.||.|..=||..|+... .+.+.|.|+.|...
T Consensus 60 Dg~~d~C~vC~---~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCA---EGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSC---CCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccC---CCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3344566 455 67789999999999999999832 24569999999863
No 144
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=74.21 E-value=5 Score=50.08 Aligned_cols=105 Identities=18% Similarity=0.178 Sum_probs=75.4
Q ss_pred cceeeeccccc-ccceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchhhh
Q 000212 417 VPWLYLGMLFS-AFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1850)
Q Consensus 417 ~P~lyvGm~fS-~~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~L~ 495 (1850)
.--+|++-.+| +|..|.+++.. +..+..| .|.|...|+.+... .+|.. ..+++ .+.
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~lp~~--~~~~~--------~~~--- 221 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------ELALT--SSPNF--------SQD--- 221 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------TTCSS--CCCCC--------CGG---
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------cCCCc--ccccC--------Ccc---
Confidence 34579998888 47889999754 4556666 79999999886542 23321 11111 222
Q ss_pred hCCCceeecccCCccEEEEcCCccceeecc--cccceeecccCC-CCchhhh
Q 000212 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNF--GLNCAEAVNFAP-ADWLPHG 544 (1850)
Q Consensus 496 ~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~--G~n~~eavNfa~-~~Wl~~g 544 (1850)
+.+-|++.++-+|||.++.-||..|.+.+. ++++.-++++.+ .+|.++-
T Consensus 222 ~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll 273 (489)
T 4diq_A 222 DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFL 273 (489)
T ss_dssp GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHH
T ss_pred cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHH
Confidence 246789999999999999999999999998 478888887654 6786543
No 145
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.53 E-value=1.7 Score=40.24 Aligned_cols=48 Identities=25% Similarity=0.417 Sum_probs=34.7
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+...|.+|...+.+...+.--.|++.||..|+..... ....||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~ 60 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLE-----QHDSCPVCRK 60 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHT-----TTCSCTTTCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHH-----cCCcCcCcCC
Confidence 44578999988887655544446999999999984432 1258999954
No 146
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=70.65 E-value=1.2 Score=43.03 Aligned_cols=47 Identities=19% Similarity=0.392 Sum_probs=34.7
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.+...|.+|...+.....+..--|++.||..|+..-... ...||.|.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~-----~~~CP~Cr 84 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK-----SGTCPVCR 84 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT-----TCBCTTTC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc-----CCcCcCcC
Confidence 345789999887776666555569999999999844322 34899994
No 147
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.39 E-value=1.1 Score=40.99 Aligned_cols=48 Identities=29% Similarity=0.535 Sum_probs=34.6
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+...|.+|...+.+...+.--.|++.||..|+..-... ...||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~-----~~~CP~Cr~ 60 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV-----RKVCPLCNM 60 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc-----CCcCCCcCc
Confidence 345789999988876655544469999999999844322 238999954
No 148
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=69.40 E-value=1.6 Score=37.39 Aligned_cols=47 Identities=21% Similarity=0.430 Sum_probs=33.6
Q ss_pred CCcccccccCCCCc-cceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1450 SMTLCMCCESDSKE-LEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~-~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+...|.+|..++.+ ...+....|++.||..|+....... ..||.|..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-----~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-----YRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-----CCCTTSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-----CcCCCCCC
Confidence 34669999888744 3346667799999999998443322 78999943
No 149
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.29 E-value=1.5 Score=43.77 Aligned_cols=50 Identities=22% Similarity=0.499 Sum_probs=34.4
Q ss_pred cccccccCCCCccc---------------eeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKELE---------------FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~---------------~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
..|.+|..++.+.. .+.--.|++.||..|+..-...........||.|..
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 46999987764432 234567999999999985543322245679999954
No 150
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.27 E-value=1.7 Score=40.74 Aligned_cols=45 Identities=13% Similarity=0.298 Sum_probs=32.3
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
...-.|.+|.....+-.. ..|++.||..|+..... ....||.|..
T Consensus 13 ~~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~ 57 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV---TKCRHYFCESCALEHFR-----ATPRCYICDQ 57 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE---CTTSCEEEHHHHHHHHH-----HCSBCSSSCC
T ss_pred CCCCCCcCCCchhcCeeE---ccCCCHhHHHHHHHHHH-----CCCcCCCcCc
Confidence 344679999887766332 47999999999984432 2568999944
No 151
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=54.22 E-value=9.5 Score=36.53 Aligned_cols=49 Identities=24% Similarity=0.548 Sum_probs=39.2
Q ss_pred ceEEEeccCCCC------CCceeecCCC-ceEEcccccccCCCCceecCCCcCCCC
Q 000212 1709 MLYCICRKPYDE------KAMIACYQCD-EWYHIDCVKLLSAPEIYICAACKPQAE 1757 (1850)
Q Consensus 1709 ~~yC~C~~~~~~------~~mi~Cd~C~-~WfH~~Cvgi~~~~~~~~C~~C~~~~~ 1757 (1850)
+.-|+|.++-+. =.||-|..|. .=-|..|..+....+.|.|..|....+
T Consensus 26 A~~Clc~~GR~~~~~~~~W~L~lC~~Cgs~gtH~~Cs~l~~~~~~weC~~C~~v~~ 81 (85)
T 1weq_A 26 APICLYEQGRDSFEDEGRWRLILCATCGSHGTHRDCSSLRPNSKKWECNECLPASG 81 (85)
T ss_dssp CSCCCSTTCSSCCBSSSTTBCEECSSSCCCEECSGGGTCCTTCSCCCCTTTSCCSS
T ss_pred ccccCCCCCcccccCCCCEEEEeCcccCCchhHHHHhCCcCCCCCEECCcCccccC
Confidence 457899543322 2489999998 889999999998899999999997555
No 152
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.86 E-value=3.3 Score=37.43 Aligned_cols=46 Identities=15% Similarity=0.432 Sum_probs=33.6
Q ss_pred CCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1447 GSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1447 ~~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+-.+...|.+|.....+ .. ..|++.||..|+..... ....||.|..
T Consensus 11 ~~~~~~~C~IC~~~~~~-~~---~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~ 56 (70)
T 2ecn_A 11 QLTDEEECCICMDGRAD-LI---LPCAHSFCQKCIDKWSD-----RHRNCPICRL 56 (70)
T ss_dssp CCCCCCCCSSSCCSCCS-EE---ETTTEEECHHHHHHSSC-----CCSSCHHHHH
T ss_pred cCCCCCCCeeCCcCccC-cc---cCCCCcccHHHHHHHHH-----CcCcCCCcCC
Confidence 33456789999888777 22 35899999999984432 4678999954
No 153
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.67 E-value=5.1 Score=36.39 Aligned_cols=45 Identities=18% Similarity=0.459 Sum_probs=32.3
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+...|.+|.....+...+ .|++.||..|+...... ...||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~ 57 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL---PCKHVFCYLCVKGASWL-----GKRCALCRQ 57 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE---TTTEEEEHHHHHHCTTC-----SSBCSSSCC
T ss_pred CCCCCCccCCcccCCCEEc---cCCCHHHHHHHHHHHHC-----CCcCcCcCc
Confidence 4556799998877664433 59999999999843322 268999954
No 154
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.10 E-value=4 Score=38.37 Aligned_cols=45 Identities=20% Similarity=0.577 Sum_probs=29.3
Q ss_pred CcccccccCCCCc-----------cc-eeeccccccccccccCCCccccccccccccCCccc
Q 000212 1451 MTLCMCCESDSKE-----------LE-FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~-----------~~-~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
...|++|..+..+ .. .+.-..|++.||..|+..-.... -.||.|.
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~-----~~CP~CR 71 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN-----NRCPLCQ 71 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC-----CBCTTTC
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC-----CCCCCcC
Confidence 3457877776643 22 23334699999999998433322 2899994
No 155
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.88 E-value=5.2 Score=36.27 Aligned_cols=48 Identities=17% Similarity=0.483 Sum_probs=34.3
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|.....+..++ .|++.||..|+..... .......||.|..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~--~~~~~~~CP~Cr~ 65 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGE--TSCGFFKCPLCKT 65 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC---TTCCEEEHHHHHHHCS--SSCSCCCCSSSCC
T ss_pred ccCCEeccCCcccCCeEEc---CCCChhhHHHHHHHHH--cCCCCCCCCCCCC
Confidence 3456799998877764433 7999999999984432 1235678999944
No 156
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.49 E-value=11 Score=32.61 Aligned_cols=42 Identities=26% Similarity=0.636 Sum_probs=31.3
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|...+.+-.++ .|++.|+..|+.. ....||.|..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~--------~~~~CP~Cr~ 45 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA--------SGMQCPICQA 45 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS--------SSSSCSSCCS
T ss_pred ccCCCceEeCCccCCeEEc---CCCCcccHHHHcc--------CCCCCCcCCc
Confidence 4456699998877765444 4899999999983 3568999944
No 157
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=49.42 E-value=7.2 Score=44.43 Aligned_cols=90 Identities=24% Similarity=0.369 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHhhHHHHHHhhhhcccccCCCCchHHHHHHHHhhhccceeeecCCCCCCCCcccccccCCCCccceeecc
Q 000212 1391 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1470 (1850)
Q Consensus 1391 ~e~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~c~~~~~~~~~i~C~ 1470 (1850)
+|.+.++.+.-. ++|+..- +..+.+ ..-+|++...-++.+... ....|..|..-.. .-..|.
T Consensus 136 ~eae~lL~~lv~-~gWl~~~-~g~~~l--~~R~l~El~~~l~~~~~~------------~i~~C~iC~~iv~--~g~~C~ 197 (238)
T 3nw0_A 136 KEAEQVLQKFVQ-NKWLIEK-EGEFTL--HGRAILEMEQYIRETYPD------------AVKICNICHSLLI--QGQSCE 197 (238)
T ss_dssp HHHHHHHHHHHH-TTSEEEE-TTEEEE--CHHHHHHHHHHHHHHCTT------------TCCBCTTTCSBCS--SCEECS
T ss_pred HHHHHHHHHHHH-hcchhhh-CCEEEe--cCccHHHHHHHHHHhcCC------------CCCcCcchhhHHh--CCcccC
Confidence 344444444331 3677553 222222 224555555555444431 2577999944443 459999
Q ss_pred ccccccccccCCCccccccccccccCCcccc
Q 000212 1471 ACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1471 ~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.|+..||..|+..-. ++-..-.||.|..
T Consensus 198 ~C~~~~H~~C~~~~~---~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 198 TCGIRMHLPCVAKYF---QSNAEPRCPHCND 225 (238)
T ss_dssp SSCCEECHHHHHHHT---TTCSSCBCTTTCC
T ss_pred ccChHHHHHHHHHHH---HhCCCCCCCCCCC
Confidence 999999999997321 2234578999954
No 158
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.15 E-value=7.6 Score=33.41 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=31.6
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1499 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C 1499 (1850)
+...|.+|.....+...+ .|++.||..|+...... ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVII---ECGHNFCKACITRWWED--LERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTS--SCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHh--cCCCCCCCCC
Confidence 446799998877765443 69999999999843221 1246789987
No 159
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.12 E-value=5.3 Score=35.29 Aligned_cols=46 Identities=17% Similarity=0.503 Sum_probs=32.5
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1499 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C 1499 (1850)
.+.-.|.+|.....+-..+ .|++.||..|+...... ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGET--SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC---TTSSEECHHHHHHHHHH--CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe---CCCCcchHHHHHHHHHc--CCCCCcCcCC
Confidence 3456799998777764333 79999999999844332 2346689987
No 160
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.09 E-value=6.8 Score=36.81 Aligned_cols=51 Identities=20% Similarity=0.382 Sum_probs=34.7
Q ss_pred CCCcccccccCCCCccce-eeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEF-LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~-i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|...+.+... ..--.|++.||..|+....... .....||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~ 64 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS--INGVRCPFCSK 64 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC--SSCBCCTTTCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC--CCCcCCCCCCC
Confidence 344679999888776432 2223699999999998443322 24689999955
No 161
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.97 E-value=7.8 Score=36.19 Aligned_cols=47 Identities=26% Similarity=0.518 Sum_probs=33.4
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000212 1451 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1502 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1502 (1850)
...|++|..-+- .-+.|..|+..||..|+.--.+. + ..=.||.|...
T Consensus 15 i~~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~~-~--~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQS-N--AEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCS--SSEECSSSCCEECHHHHHHHSTT-C--SSCCCTTTCSC
T ss_pred CCcCcchhhHcc--cCCccCCCCchhhHHHHHHHHHh-c--CCCCCCCCcCc
Confidence 477999966664 34799999999999999833322 1 12479999643
No 162
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=43.16 E-value=43 Score=41.53 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=67.5
Q ss_pred cccceeeecccccc-cceEecCCCcceeeeeecCCCeeEEecCCcchHHHHHHHHhhCCCcccCChhhhhhhccccCchh
Q 000212 415 VMVPWLYLGMLFSA-FCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV 493 (1850)
Q Consensus 415 v~~P~lyvGm~fS~-~~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~p~~l~~~~~~~~P~~ 493 (1850)
.....+|+|-.++. |..|.+++.. +..+..| .|.|...|+.. -+|.. . . +- .|+
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~----------pl~~~---~-s-----~d--~~~- 192 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTV----------PLARE---Y-S-----VE--AEE- 192 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSS----------TTCSS---C-E-----EC--CTT-
T ss_pred CcccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCC----------Ccccc---C-C-----CC--chh-
Confidence 44567899998875 5899986542 3344455 89999999864 01210 0 0 00 112
Q ss_pred hhhCCCceeecccCCccEEEEcCCccceeeccc---ccceeecc-cCCCCchhhhh
Q 000212 494 LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG---LNCAEAVN-FAPADWLPHGG 545 (1850)
Q Consensus 494 L~~~GIpv~~~~Q~pGefVvtfP~ayH~g~n~G---~n~~eavN-fa~~~Wl~~g~ 545 (1850)
+.|-+.+.++=+|||.++.-||.+|.+.+.+ +++.-.+. |...+|.++-.
T Consensus 193 --~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~ 246 (442)
T 2xdv_A 193 --RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLL 246 (442)
T ss_dssp --TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHH
T ss_pred --hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHH
Confidence 2356788999999999999999999998874 23322232 23477876543
No 163
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=42.22 E-value=12 Score=37.91 Aligned_cols=42 Identities=26% Similarity=0.668 Sum_probs=30.6
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.|.+|.....+-.++ .|++.||..|+..... ...+.||.|..
T Consensus 54 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~ 95 (124)
T 3fl2_A 54 QCICCQELVFRPITT---VCQHNVCKDCLDRSFR----AQVFSCPACRY 95 (124)
T ss_dssp BCTTTSSBCSSEEEC---TTSCEEEHHHHHHHHH----TTCCBCTTTCC
T ss_pred CCCcCChHHcCcEEe---eCCCcccHHHHHHHHh----HCcCCCCCCCc
Confidence 499998777764444 7999999999973322 34579999943
No 164
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=40.37 E-value=10 Score=36.70 Aligned_cols=42 Identities=21% Similarity=0.363 Sum_probs=30.0
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.|.+|.....+-.+ ...|++.||..|+..... ....||.|..
T Consensus 24 ~C~IC~~~~~~p~~--~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~ 65 (99)
T 2y43_A 24 RCGICFEYFNIAMI--IPQCSHNYCSLCIRKFLS-----YKTQCPTCCV 65 (99)
T ss_dssp BCTTTCSBCSSEEE--CTTTCCEEEHHHHHHHHT-----TCCBCTTTCC
T ss_pred CcccCChhhCCcCE--ECCCCCHhhHHHHHHHHH-----CCCCCCCCCC
Confidence 49999877776333 357999999999984332 2368999943
No 165
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.07 E-value=9.2 Score=35.45 Aligned_cols=50 Identities=18% Similarity=0.364 Sum_probs=34.6
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccc-cccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR-NHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~-~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|.....+-.++ .|++.||..|+....... .......||.|..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~ 67 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRI 67 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCC
T ss_pred cCCCCCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCC
Confidence 3456799998887764443 699999999998433221 1233689999955
No 166
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=39.94 E-value=13 Score=36.52 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=30.4
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.|.+|.....+-..+ .|++.||..|+....... .....||.|..
T Consensus 23 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~ 66 (112)
T 1jm7_A 23 ECPICLELIKEPVST---KCDHIFCKFCMLKLLNQK--KGPSQCPLCKN 66 (112)
T ss_dssp SCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHSS--SSSCCCTTTSC
T ss_pred CCcccChhhcCeEEC---CCCCHHHHHHHHHHHHhC--CCCCCCcCCCC
Confidence 499998777654333 699999999998433222 23478999944
No 167
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.23 E-value=5.4 Score=35.58 Aligned_cols=47 Identities=26% Similarity=0.665 Sum_probs=33.3
Q ss_pred CCCcccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1449 VSMTLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~----~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.+...|.+|...+.+. ..+.-..|++.||..|+...... ...||.|.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr 63 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCR 63 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-----CSSCTTTC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-----CCCCCCCC
Confidence 3456799998877653 23355689999999999844322 35899993
No 168
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=37.73 E-value=10 Score=35.09 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=34.2
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccc-cccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR-NHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~-~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|.....+...+ .|++.||..|+....... .......||.|..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~ 67 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSA---DCNHSFCRACITLNYESNRNTDGKGNCPVCRV 67 (85)
T ss_dssp CTTTSCTTTCSCCSSCEEC---TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCC
T ss_pred ccCCCCcCCChhhCcceeC---CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence 3446799998887664433 499999999998432221 1234789999955
No 169
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=37.63 E-value=6.9 Score=40.54 Aligned_cols=40 Identities=23% Similarity=0.534 Sum_probs=28.4
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.|.+|...+.+..++ .|++.||..|+.--.. ..-.||.|-
T Consensus 55 ~C~iC~~~~~~~~~~---~CgH~fc~~Ci~~~~~-----~~~~CP~Cr 94 (138)
T 4ayc_A 55 QCIICSEYFIEAVTL---NCAHSFCSYCINEWMK-----RKIECPICR 94 (138)
T ss_dssp BCTTTCSBCSSEEEE---TTSCEEEHHHHHHHTT-----TCSBCTTTC
T ss_pred CCcccCcccCCceEC---CCCCCccHHHHHHHHH-----cCCcCCCCC
Confidence 399998877664443 5899999999873221 235699993
No 170
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=37.58 E-value=4.1 Score=36.76 Aligned_cols=47 Identities=26% Similarity=0.658 Sum_probs=33.1
Q ss_pred CCcccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1450 SMTLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~----~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+...|.+|.....+. ..+....|++.||..|+...... .-.||.|..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~ 59 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRK 59 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-----CCCCCCCCC
Confidence 446799998776553 34466789999999999844322 248999954
No 171
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=37.19 E-value=11 Score=37.59 Aligned_cols=43 Identities=23% Similarity=0.520 Sum_probs=31.2
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.|.+|.....+-..+ .|++.||..|+...... ....||.|..
T Consensus 16 ~~C~iC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~ 58 (115)
T 3l11_A 16 CQCGICMEILVEPVTL---PCNHTLCKPCFQSTVEK----ASLCCPFCRR 58 (115)
T ss_dssp HBCTTTCSBCSSCEEC---TTSCEECHHHHCCCCCT----TTSBCTTTCC
T ss_pred CCCccCCcccCceeEc---CCCCHHhHHHHHHHHhH----CcCCCCCCCc
Confidence 4599998777654444 69999999999854332 2478999943
No 172
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.18 E-value=11 Score=35.71 Aligned_cols=50 Identities=20% Similarity=0.577 Sum_probs=31.8
Q ss_pred CCCcccccccCCCCcc-ceee---ccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKEL-EFLI---CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~-~~i~---C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+...|.+|..++.+. .++. |.-..++||..|+.-=.... ....||-|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~---~~~~CplCr~ 66 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS---DTRCCELCKY 66 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH---CCSBCSSSCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC---CCCCCCCCCC
Confidence 3457899998776433 3431 22225999999998433322 2468999954
No 173
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=36.63 E-value=8.8 Score=34.28 Aligned_cols=44 Identities=18% Similarity=0.514 Sum_probs=31.1
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1451 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
...|.+|.....+.. ..-.|++.||..|+..... ....||.|..
T Consensus 5 ~~~C~IC~~~~~~~~--~~~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~ 48 (68)
T 1chc_A 5 AERCPICLEDPSNYS--MALPCLHAFCYVCITRWIR-----QNPTCPLCKV 48 (68)
T ss_dssp CCCCSSCCSCCCSCE--EETTTTEEESTTHHHHHHH-----HSCSTTTTCC
T ss_pred CCCCeeCCccccCCc--EecCCCCeeHHHHHHHHHh-----CcCcCcCCCh
Confidence 457999988876532 3346999999999984332 2358999954
No 174
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=36.63 E-value=4.1 Score=35.77 Aligned_cols=45 Identities=27% Similarity=0.688 Sum_probs=31.6
Q ss_pred cccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~----~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
..|.+|.....+. ..+....|++.||..|+...... ...||.|..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~ 52 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRK 52 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-----CCCCCCCCc
Confidence 4588887766542 33455689999999999844332 458999944
No 175
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=35.79 E-value=5.4e+02 Score=29.33 Aligned_cols=38 Identities=8% Similarity=0.216 Sum_probs=24.6
Q ss_pred HHHHHHHhhhHHHHHHHHHhhccCCCcccHHHHHHHHHH
Q 000212 875 KLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESE 913 (1850)
Q Consensus 875 ~L~~rleqak~Wl~kvr~~L~~~~~~~~tLd~Lr~Ll~E 913 (1850)
.....++.+..|+++....+...+ ...+++.+..++..
T Consensus 113 ~f~~~~~~~~~Wl~e~e~~~~~~~-~g~dl~~v~~ll~~ 150 (322)
T 1u4q_A 113 QFFRDMDDEESWIKEKKLLVSSED-YGRDLTGVQNLRKK 150 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCC-CCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC-cCCCHHHHHHHHHH
Confidence 344445566679988877665432 23478888888854
No 176
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=35.46 E-value=16 Score=33.39 Aligned_cols=49 Identities=18% Similarity=0.358 Sum_probs=33.9
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccc--cccccccCCcccc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR--NHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~--~~~~~~~Cp~C~~ 1501 (1850)
+.-.|.+|.....+-.++ .|++.||..|+.-..... .......||.|..
T Consensus 11 ~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~ 61 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGI 61 (79)
T ss_dssp CCCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCC
T ss_pred cCCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCC
Confidence 445699998777664433 699999999999443332 1234779999954
No 177
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=35.35 E-value=7.3 Score=38.05 Aligned_cols=44 Identities=20% Similarity=0.610 Sum_probs=32.1
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.|.+|.....+ -+.|..|++.||..|+..-.... ...||.|..
T Consensus 23 ~~C~IC~~~~~~--p~~~~~CgH~FC~~Ci~~~~~~~----~~~CP~Cr~ 66 (100)
T 3lrq_A 23 FRCFICMEKLRD--ARLCPHCSKLCCFSCIRRWLTEQ----RAQCPHCRA 66 (100)
T ss_dssp TBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHHHT----CSBCTTTCC
T ss_pred CCCccCCccccC--ccccCCCCChhhHHHHHHHHHHC----cCCCCCCCC
Confidence 349999777654 56778999999999998433222 178999943
No 178
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=35.33 E-value=11 Score=35.26 Aligned_cols=47 Identities=21% Similarity=0.527 Sum_probs=33.2
Q ss_pred CCcccccccCCCC--ccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1450 SMTLCMCCESDSK--ELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~--~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+...|.+|..+.. +..+..| .||+-|+..|+..... ...+.||.|..
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~----~~~~~CP~CR~ 58 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT----DENGLCPACRK 58 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT----SSCSBCTTTCC
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh----cCCCCCCCCCC
Confidence 4456999988773 3344555 7999999999874322 24689999954
No 179
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=35.31 E-value=29 Score=29.65 Aligned_cols=39 Identities=18% Similarity=0.488 Sum_probs=27.9
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
.|...|..+|. +.|..||..|+ ++ ...+.+..|..||.|
T Consensus 13 ~L~~~v~~~G~-------~~W~~Ia~~~~-~R-----t~~qcr~Rw~~~L~P 51 (52)
T 1gvd_A 13 RLIKLVQKYGP-------KRWSVIAKHLK-GR-----IGKQCRERWHNHLNP 51 (52)
T ss_dssp HHHHHHHHHCT-------TCHHHHHTTST-TC-----CHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHCc-------ChHHHHHHHcC-CC-----CHHHHHHHHHHHcCc
Confidence 35666777662 57999999884 22 234789999999876
No 180
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=34.76 E-value=8 Score=41.20 Aligned_cols=44 Identities=18% Similarity=0.447 Sum_probs=32.4
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.|.+|.....+ -+.+..|++.||..|+...... ....||.|..
T Consensus 55 ~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~ 98 (165)
T 2ckl_B 55 LMCPICLDMLKN--TMTTKECLHRFCADCIITALRS----GNKECPTCRK 98 (165)
T ss_dssp HBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHHT----TCCBCTTTCC
T ss_pred CCCcccChHhhC--cCEeCCCCChhHHHHHHHHHHh----CcCCCCCCCC
Confidence 469999777765 4555689999999999844331 2578999943
No 181
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=34.50 E-value=8.6 Score=36.60 Aligned_cols=48 Identities=21% Similarity=0.621 Sum_probs=32.5
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.+.-.|.+|.....+-.++ ..|++.|+..|+..... ......||.|..
T Consensus 11 ~~~~~C~IC~~~~~~p~~~--~~CgH~fC~~Ci~~~~~---~~~~~~CP~Cr~ 58 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVI--PCCGNSYCDECIRTALL---ESDEHTCPTCHQ 58 (92)
T ss_dssp CTTTEETTTTEECSSCEEC--TTTCCEECHHHHHHHHH---HCTTCCCTTTCC
T ss_pred CcCCCCCCCChhhcCceEC--CCCCCHHHHHHHHHHHH---hcCCCcCcCCCC
Confidence 3446799998777654433 33999999999983322 223479999943
No 182
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.50 E-value=13 Score=33.85 Aligned_cols=47 Identities=17% Similarity=0.405 Sum_probs=33.4
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1448 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1448 ~~~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.+.-.|.+|.....+- +.-..|++.||..|+...... ...||.|..
T Consensus 12 ~~~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~ 58 (72)
T 2djb_A 12 LTPYILCSICKGYLIDA--TTITECLHTFCKSCIVRHFYY-----SNRCPKCNI 58 (72)
T ss_dssp CCGGGSCTTTSSCCSSC--EECSSSCCEECHHHHHHHHHH-----CSSCTTTCC
T ss_pred cCCCCCCCCCChHHHCc--CEECCCCCHHHHHHHHHHHHc-----CCcCCCcCc
Confidence 34456799998777663 333579999999999843322 468999954
No 183
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=31.80 E-value=8.5 Score=41.01 Aligned_cols=52 Identities=25% Similarity=0.714 Sum_probs=38.6
Q ss_pred chhhhhhhcccCCCCCcceeccc--cCCCccccccCC----CC-CCC-CCCCCCcccccccCC
Q 000212 243 DELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLS----PP-LKH-VPRGNWYCLECLNSD 297 (1850)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~----PP-L~~-vP~gdW~C~~C~~~~ 297 (1850)
|..+..|..|+.|. .+++|| .|.+.|=..|+. |- +.. +....|.|.-|...+
T Consensus 76 DG~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 76 DGYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TSSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 33456899999774 699999 899999999964 31 222 445789999998754
No 184
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=31.71 E-value=11 Score=38.39 Aligned_cols=44 Identities=18% Similarity=0.522 Sum_probs=0.0
Q ss_pred cccccccCCCCccc---------------eeeccccccccccccCCCccccccccccccCCccc
Q 000212 1452 TLCMCCESDSKELE---------------FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~---------------~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
..|++|..++.+.- .+.--.|++.||..|+..-+.. .-.||-|.
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-----~~~CP~Cr 107 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-----RQVCPLDN 107 (117)
T ss_dssp ----------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-----CCcCCCCC
Confidence 56999987765421 1222369999999999854333 34799993
No 185
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=31.63 E-value=40 Score=28.73 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=27.6
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
.|...|..+|. ..|..||..|+ ++ ...+.+..|..||.|
T Consensus 13 ~L~~~v~~~G~-------~~W~~Ia~~~~-~R-----t~~qcr~Rw~~~L~P 51 (52)
T 1guu_A 13 KLKKLVEQNGT-------DDWKVIANYLP-NR-----TDVQCQHRWQKVLNP 51 (52)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHTST-TC-----CHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCC-------CCHHHHHHHcC-CC-----CHHHHHHHHHHHcCc
Confidence 35666777653 47999999984 12 234789999999865
No 186
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=30.92 E-value=12 Score=37.21 Aligned_cols=46 Identities=17% Similarity=0.498 Sum_probs=30.6
Q ss_pred CcccccccCCCCcc---------------ceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1451 MTLCMCCESDSKEL---------------EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1451 ~~~C~~c~~~~~~~---------------~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
...|++|...+.+. ..+.--.|++.||..|+..-+.. .-.||-|..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-----~~~CP~Cr~ 97 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-----RQVCPLDNR 97 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-----CSBCSSSCS
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc-----CCcCcCCCC
Confidence 35588887766543 12333579999999999844332 467999943
No 187
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.25 E-value=12 Score=33.30 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=32.2
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+.-.|.+|.....+... -.|++.||..|+..... .....||.|..
T Consensus 14 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~ 58 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ---TECGHRFCESCMAALLS----SSSPKCTACQE 58 (66)
T ss_dssp CCEECTTTCCEESSCCC---CSSSCCCCHHHHHHHHT----TSSCCCTTTCC
T ss_pred cCCCCCCCChHhcCeeE---CCCCCHHHHHHHHHHHH----hCcCCCCCCCc
Confidence 44669999777665444 37999999999984432 34568999944
No 188
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=29.34 E-value=43 Score=30.43 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=28.7
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcC-CCccchhhHHHHHHHHHHhhhc
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRS-NRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~-~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
.|...|..+|. +.|..|+..|++ +++ ..+++.-|..||.|
T Consensus 20 ~L~~~v~~~G~-------~~W~~Ia~~~~~~~Rt-----~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 20 NLRSGVRKYGE-------GNWSKILLHYKFNNRT-----SVMLKDRWRTMKKL 60 (69)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHHSCCSSCC-----HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCC-------CcHHHHHHHcCcCCCC-----HHHHHHHHHHHcCC
Confidence 46677777762 479999999975 332 34788888888754
No 189
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=28.15 E-value=18 Score=33.08 Aligned_cols=47 Identities=21% Similarity=0.626 Sum_probs=32.6
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
+.-.|.+|.....+-.. -..|++.||..|+....... ....||.|..
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV--IPCCGNSYCDECIRTALLES---DEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTTCEE--CSSSCCEECTTHHHHHHHHS---SSSCCSSSCC
T ss_pred CCCCCcCCChHHhCCeE--cCCCCCHHHHHHHHHHHHhc---CCCcCCCCCC
Confidence 44679999877765333 33499999999998443321 2578999955
No 190
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.49 E-value=50 Score=30.04 Aligned_cols=39 Identities=15% Similarity=0.366 Sum_probs=27.9
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
.|...|..+|. +.|..||..|+ .++ ..+.+..|..||.|
T Consensus 19 ~L~~~v~~~G~-------~~W~~Ia~~l~-~Rt-----~~qcr~Rw~~~L~p 57 (70)
T 2dim_A 19 ILKAAVMKYGK-------NQWSRIASLLH-RKS-----AKQCKARWYEWLDP 57 (70)
T ss_dssp HHHHHHHHTCS-------SCHHHHHHHST-TCC-----HHHHHHHHHHTSCS
T ss_pred HHHHHHHHHCc-------CCHHHHHHHhc-CCC-----HHHHHHHHHHHcCC
Confidence 46677777762 57999999985 232 34788888888854
No 191
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=27.03 E-value=28 Score=34.77 Aligned_cols=39 Identities=23% Similarity=0.514 Sum_probs=28.6
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1500 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1500 (1850)
.|.+|.....+-.++ ..|++.|+..|+..... ..||.|.
T Consensus 24 ~C~IC~~~~~~pv~~--~~CgH~fC~~Ci~~~~~-------~~CP~Cr 62 (117)
T 1jm7_B 24 RCSRCTNILREPVCL--GGCEHIFCSNCVSDCIG-------TGCPVCY 62 (117)
T ss_dssp SCSSSCSCCSSCBCC--CSSSCCBCTTTGGGGTT-------TBCSSSC
T ss_pred CCCCCChHhhCccEe--CCCCCHHHHHHHHHHhc-------CCCcCCC
Confidence 489998777654333 26899999999984432 7899993
No 192
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=26.50 E-value=12 Score=33.41 Aligned_cols=50 Identities=18% Similarity=0.415 Sum_probs=31.9
Q ss_pred CCCcccccccCCCCccceee--ccccccccccccCCCccccccccccccCCcccc
Q 000212 1449 VSMTLCMCCESDSKELEFLI--CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1449 ~~~~~C~~c~~~~~~~~~i~--C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
++...|.+|....++.-..- |.....++|.+|+.-=... ..+..||-|..
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~---~~~~~C~~C~~ 55 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI---SRNTACQICGV 55 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH---HTCSBCTTTCC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh---CCCCccCCCCC
Confidence 45678999977654432333 4455569999999833222 12578999943
No 193
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=26.20 E-value=65 Score=28.44 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=27.4
Q ss_pred HHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000212 135 LFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 135 L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
|..+|..+|- +.|..||..|+- ++ ....+.+|.+||.+
T Consensus 19 L~~~v~~~G~-------~~W~~Ia~~~~~-Rt-----~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 19 LLEAVMDCGF-------GNWQDVANQMCT-KT-----KEECEKHYMKYFSG 56 (60)
T ss_dssp HHHHHHHTCT-------TCHHHHHHHHTT-SC-----HHHHHHHHHHHTTC
T ss_pred HHHHHHHHCc-------CcHHHHHHHhCC-CC-----HHHHHHHHHHHccC
Confidence 5567777762 479999999941 22 34789999998853
No 194
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=25.77 E-value=8.5 Score=46.59 Aligned_cols=52 Identities=31% Similarity=0.776 Sum_probs=38.1
Q ss_pred chhhhhhhcccCCCCCcceeccc--cCCCccccccCCCCC-----CCC-CCCCCcccccccCC
Q 000212 243 DELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPL-----KHV-PRGNWYCLECLNSD 297 (1850)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL-----~~v-P~gdW~C~~C~~~~ 297 (1850)
+..+..|..|+.|. .+++|| .|.+.|-..|+.--+ ..+ ....|.|.-|...+
T Consensus 90 DG~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 90 DGYQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 34466899999774 599999 999999999965222 222 23689999998754
No 195
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=25.20 E-value=61 Score=28.45 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=27.9
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1850)
.|...|..+|. +.|..||..|. .+ ...+.+..|..||.|
T Consensus 18 ~L~~~v~~~G~-------~~W~~Ia~~~~-~R-----t~~qcr~Rw~~~l~p 56 (60)
T 2d9a_A 18 QLRALVRQFGQ-------QDWKFLASHFP-NR-----TDQQCQYRWLRVLSG 56 (60)
T ss_dssp HHHHHHHHTCT-------TCHHHHHHHCS-SS-----CHHHHHHHHHHTSCS
T ss_pred HHHHHHHHhCC-------CCHHHHHHHcc-CC-----CHHHHHHHHHHHcCC
Confidence 35667777762 57999999984 12 234789999998865
No 196
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=24.43 E-value=20 Score=35.69 Aligned_cols=69 Identities=19% Similarity=0.351 Sum_probs=43.0
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccccccccccCCCCcccCCCCCchHHHHHhh
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1531 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~~~~~~~~~~~~~~~rp~l~~~~~l~ 1531 (1850)
-.|.+|.....+-.. -.|++.||..|+.-..... ...||.|...-.. ..-++++..+..++
T Consensus 24 ~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~~~~------------~~~~~~~~~l~~~i 84 (116)
T 1rmd_A 24 ISCQICEHILADPVE---TSCKHLFCRICILRCLKVM----GSYCPSCRYPCFP------------TDLESPVKSFLNIL 84 (116)
T ss_dssp TBCTTTCSBCSSEEE---CTTSCEEEHHHHHHHHHHT----CSBCTTTCCBCCG------------GGCBCCCHHHHHHH
T ss_pred CCCCCCCcHhcCcEE---cCCCCcccHHHHHHHHhHC----cCcCCCCCCCCCH------------hhccccHHHHHHHH
Confidence 459999777665333 3799999999998443221 3579999442111 11134466677777
Q ss_pred hccchhcc
Q 000212 1532 SDSEFFCR 1539 (1850)
Q Consensus 1532 s~~~~~~~ 1539 (1850)
...+-.|.
T Consensus 85 ~~l~v~C~ 92 (116)
T 1rmd_A 85 NSLMVKCP 92 (116)
T ss_dssp HHCEEECC
T ss_pred HHhcCCCC
Confidence 76666554
No 197
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=24.36 E-value=16 Score=35.91 Aligned_cols=43 Identities=16% Similarity=0.439 Sum_probs=30.9
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1452 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1452 ~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
-.|.+|.....+ -+....|++.||..|+...... ...||.|..
T Consensus 16 ~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~ 58 (108)
T 2ckl_A 16 LMCVLCGGYFID--ATTIIECLHSFCKTCIVRYLET-----SKYCPICDV 58 (108)
T ss_dssp TBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHTS-----CSBCTTTCC
T ss_pred CCCccCChHHhC--cCEeCCCCChhhHHHHHHHHHh-----CCcCcCCCc
Confidence 459999777765 3444589999999999833222 278999943
No 198
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=23.21 E-value=78 Score=29.54 Aligned_cols=29 Identities=24% Similarity=0.726 Sum_probs=25.2
Q ss_pred ccccccccccchhhccccccCCCceeehhch
Q 000212 626 DPTCIICRQYLYLSAVACRCRPAAFVCLEHW 656 (1850)
Q Consensus 626 ~~~C~~C~~~~fls~v~c~~~~~~~~CL~h~ 656 (1850)
...|..|+.-+-|..+.|.| +.++|..|-
T Consensus 25 ~~RC~~C~kkvgL~~f~CrC--g~~FCs~HR 53 (74)
T 1wfp_A 25 ATRCLSCNKKVGVTGFKCRC--GSTFCGTHR 53 (74)
T ss_dssp CCBCSSSCCBCTTTCEECTT--SCEECTTTC
T ss_pred CccchhhcCcccccceEecc--CCEeccccC
Confidence 35899999999888999988 479999994
No 199
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=22.77 E-value=19 Score=34.58 Aligned_cols=51 Identities=18% Similarity=0.380 Sum_probs=37.7
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCcccc--ccc-cccccCCc--cc
Q 000212 1450 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVD--RNH-AEAYICPY--CQ 1500 (1850)
Q Consensus 1450 ~~~~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~--~~~-~~~~~Cp~--C~ 1500 (1850)
+.-.|.+|..+..+..|+.-..|++.|...|+.--... ..+ .....||. |.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~ 59 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACP 59 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCS
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCC
Confidence 34569999999988888887889999999998833221 122 24679999 94
No 200
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.62 E-value=66 Score=30.82 Aligned_cols=29 Identities=28% Similarity=0.714 Sum_probs=24.7
Q ss_pred ccccccccccchhh-ccccccCCCceeehhch
Q 000212 626 DPTCIICRQYLYLS-AVACRCRPAAFVCLEHW 656 (1850)
Q Consensus 626 ~~~C~~C~~~~fls-~v~c~~~~~~~~CL~h~ 656 (1850)
...|..|+.-+-|. .+.|.| +.++|..|-
T Consensus 25 ~~rC~~C~kkvgl~~~f~CrC--g~~FC~~HR 54 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECRC--GNNFCASHR 54 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTT--CCEECTTTC
T ss_pred CccchhhCCeecccCCeEcCC--CCEecccCC
Confidence 35899999988885 899998 489999994
No 201
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=22.28 E-value=30 Score=27.24 Aligned_cols=14 Identities=29% Similarity=0.919 Sum_probs=11.0
Q ss_pred CCCCCcccccccCC
Q 000212 284 PRGNWYCLECLNSD 297 (1850)
Q Consensus 284 P~gdW~C~~C~~~~ 297 (1850)
..|||.|+.|-+.+
T Consensus 3 ~~gDW~C~~C~~~N 16 (33)
T 2k1p_A 3 SANDWQCKTCSNVN 16 (33)
T ss_dssp SSSSCBCSSSCCBC
T ss_pred CCCCcccCCCCCcc
Confidence 46999999996644
No 202
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=22.04 E-value=26 Score=33.64 Aligned_cols=34 Identities=29% Similarity=0.603 Sum_probs=24.1
Q ss_pred cCCCce-EEEeccCCCCCCceeec--CCCceEEccccc
Q 000212 1705 RARSML-YCICRKPYDEKAMIACY--QCDEWYHIDCVK 1739 (1850)
Q Consensus 1705 ~~~~~~-yC~C~~~~~~~~mi~Cd--~C~~WfH~~Cvg 1739 (1850)
+++-.+ .++|++... +.-|+|. .|...||..|.-
T Consensus 13 ~~R~~l~C~iC~~~~~-GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 13 PARWKLTCYLCKQKGV-GASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCCCBTTTTBCCS-SCEEECSCTTTCCEEEHHHHH
T ss_pred hHHhcCCCcCCCCCCC-cEeEecCCCCCCCcCcHHHHH
Confidence 344344 448975432 5799998 599999999953
No 203
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=21.85 E-value=84 Score=27.58 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=28.4
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhh
Q 000212 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLY 184 (1850)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~ 184 (1850)
.|..+|.++|- +.|..||..|+..++ ..+.+.+|.+|+.
T Consensus 19 ~L~~~v~~~G~-------~~W~~IA~~~~~~Rt-----~~qcr~r~~~~~~ 57 (58)
T 2elk_A 19 LLIDACETLGL-------GNWADIADYVGNART-----KEECRDHYLKTYI 57 (58)
T ss_dssp HHHHHHHHTTT-------TCHHHHHHHHCSSCC-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHCc-------CCHHHHHHHHCCCCC-----HHHHHHHHHHHcc
Confidence 46777888762 479999999974443 3467888888764
No 204
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=21.29 E-value=34 Score=31.00 Aligned_cols=28 Identities=32% Similarity=0.838 Sum_probs=24.6
Q ss_pred cccccccccchhhccccccCCCceeehhch
Q 000212 627 PTCIICRQYLYLSAVACRCRPAAFVCLEHW 656 (1850)
Q Consensus 627 ~~C~~C~~~~fls~v~c~~~~~~~~CL~h~ 656 (1850)
..|..|+.-+-|..+.|.| +.++|..|-
T Consensus 16 ~rC~~C~kkvgl~~f~CrC--g~~FC~~HR 43 (64)
T 1wfh_A 16 NRCTVCRKRVGLTGFMCRC--GTTFCGSHR 43 (64)
T ss_dssp CCCTTTCCCCCTTCEECSS--SCEECTTTC
T ss_pred CcChhhCCccCccCEEeec--CCEeccccC
Confidence 5799999998888999988 479999994
No 205
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=20.32 E-value=19 Score=38.00 Aligned_cols=42 Identities=21% Similarity=0.621 Sum_probs=30.1
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000212 1453 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1501 (1850)
Q Consensus 1453 ~C~~c~~~~~~~~~i~C~~C~~~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1501 (1850)
.|.+|.....+-.. -.|++.|+..|+...... ....||.|..
T Consensus 80 ~C~IC~~~~~~pv~---~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~ 121 (150)
T 1z6u_A 80 MCVCCQELVYQPVT---TECFHNVCKDCLQRSFKA----QVFSCPACRH 121 (150)
T ss_dssp BCTTTSSBCSSEEE---CTTSCEEEHHHHHHHHHT----TCCBCTTTCC
T ss_pred EeecCChhhcCCEE---cCCCCchhHHHHHHHHHh----CCCcCCCCCc
Confidence 39999777765443 379999999999844321 4568999943
Done!