Query 000213
Match_columns 1849
No_of_seqs 762 out of 1911
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 01:41:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/000213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 100.0 2.9E-73 1E-77 675.1 15.7 235 308-570 113-347 (381)
2 3dxt_A JMJC domain-containing 100.0 6.9E-71 2.3E-75 645.8 15.6 235 307-569 94-328 (354)
3 3opt_A DNA damage-responsive t 100.0 1.1E-69 3.8E-74 638.1 7.9 215 308-551 139-354 (373)
4 3avr_A Lysine-specific demethy 100.0 6.6E-55 2.3E-59 536.6 20.3 283 387-686 226-522 (531)
5 4ask_A Lysine-specific demethy 100.0 7.2E-52 2.4E-56 499.3 23.5 279 392-686 206-497 (510)
6 2xxz_A Lysine-specific demethy 100.0 2.3E-41 7.9E-46 395.9 10.1 154 391-553 171-329 (332)
7 2kk0_A AT-rich interactive dom 99.9 2.9E-23 9.8E-28 219.7 10.1 117 71-192 9-125 (145)
8 2li6_A SWI/SNF chromatin-remod 99.8 1.4E-21 4.9E-26 199.5 7.6 105 80-193 2-106 (116)
9 2lm1_A Lysine-specific demethy 99.8 2E-21 6.9E-26 196.1 7.8 105 83-193 1-105 (107)
10 2cxy_A BAF250B subunit, HBAF25 99.8 6.1E-21 2.1E-25 197.4 9.8 107 79-191 4-110 (125)
11 2eqy_A RBP2 like, jumonji, at 99.8 1.4E-19 4.8E-24 186.2 10.4 104 86-195 2-105 (122)
12 2jrz_A Histone demethylase jar 99.8 3.1E-19 1.1E-23 182.5 9.7 103 87-195 1-103 (117)
13 2rq5_A Protein jumonji; develo 99.8 3.9E-19 1.3E-23 181.5 8.0 101 87-191 2-102 (121)
14 1c20_A DEAD ringer protein; DN 99.8 3.7E-19 1.3E-23 185.0 7.6 104 85-193 11-114 (128)
15 1ig6_A MRF-2, modulator recogn 99.7 3.8E-18 1.3E-22 172.1 6.7 93 99-193 3-95 (107)
16 2jxj_A Histone demethylase jar 99.7 1.2E-17 4E-22 165.4 7.4 88 100-191 8-95 (96)
17 1kkx_A Transcription regulator 99.7 2.2E-17 7.5E-22 169.7 8.0 87 99-192 18-104 (123)
18 2e6r_A Jumonji/ARID domain-con 99.4 2E-14 6.7E-19 140.7 1.7 70 246-315 16-90 (92)
19 3kqi_A GRC5, PHD finger protei 99.4 1.3E-14 4.3E-19 137.0 0.1 63 1705-1769 7-74 (75)
20 1wep_A PHF8; structural genomi 99.4 1.3E-13 4.3E-18 131.6 3.5 57 1704-1760 8-69 (79)
21 3o70_A PHD finger protein 13; 99.3 2.1E-13 7.3E-18 125.8 1.3 55 1700-1754 11-67 (68)
22 3o7a_A PHD finger protein 13 v 99.3 3.7E-13 1.3E-17 118.0 0.8 47 1707-1753 3-51 (52)
23 1wem_A Death associated transc 99.3 1.6E-13 5.5E-18 129.9 -3.0 54 1704-1757 12-73 (76)
24 1wee_A PHD finger family prote 99.3 7.5E-13 2.5E-17 124.0 0.9 55 1704-1758 12-70 (72)
25 1we9_A PHD finger family prote 99.2 2.1E-12 7.2E-17 118.2 2.3 52 1705-1756 3-60 (64)
26 1wew_A DNA-binding family prot 99.2 2.2E-12 7.5E-17 122.6 0.9 53 1704-1756 12-74 (78)
27 3c6w_A P28ING5, inhibitor of g 99.2 2.3E-12 7.7E-17 115.7 0.3 50 1704-1754 5-58 (59)
28 1wen_A Inhibitor of growth fam 99.2 4.9E-12 1.7E-16 117.7 2.5 52 1704-1756 12-67 (71)
29 3kv5_D JMJC domain-containing 99.2 2.6E-12 8.8E-17 160.4 0.5 82 1703-1786 32-118 (488)
30 2g6q_A Inhibitor of growth pro 99.2 3.5E-12 1.2E-16 115.6 0.4 49 1705-1754 8-60 (62)
31 2rsd_A E3 SUMO-protein ligase 99.2 3E-12 1E-16 118.5 -0.2 50 1705-1754 7-65 (68)
32 1f62_A Transcription factor WS 99.2 9.7E-12 3.3E-16 108.6 2.9 49 248-296 2-50 (51)
33 1weu_A Inhibitor of growth fam 99.1 1E-11 3.4E-16 120.4 2.6 53 1703-1756 31-87 (91)
34 1x4i_A Inhibitor of growth pro 99.1 2.3E-12 8E-17 119.5 -2.3 51 1705-1756 3-57 (70)
35 3kv4_A PHD finger protein 8; e 99.1 3.5E-12 1.2E-16 156.9 -2.8 67 1705-1773 2-73 (447)
36 2jmi_A Protein YNG1, ING1 homo 99.1 1E-11 3.5E-16 120.1 0.8 50 1703-1753 21-75 (90)
37 2vnf_A ING 4, P29ING4, inhibit 99.1 1.1E-11 3.7E-16 111.8 0.2 50 1704-1754 6-59 (60)
38 3asl_A E3 ubiquitin-protein li 99.0 8E-11 2.7E-15 109.4 4.0 48 248-295 20-68 (70)
39 2e6s_A E3 ubiquitin-protein li 99.0 8.6E-11 2.9E-15 111.0 4.2 50 246-295 26-76 (77)
40 1fp0_A KAP-1 corepressor; PHD 99.0 8.8E-11 3E-15 112.9 3.8 51 244-297 23-73 (88)
41 1mm2_A MI2-beta; PHD, zinc fin 99.0 1.1E-10 3.8E-15 105.6 4.2 52 243-297 6-57 (61)
42 2kgg_A Histone demethylase jar 99.0 4.3E-11 1.5E-15 104.9 1.2 43 1710-1752 5-52 (52)
43 3shb_A E3 ubiquitin-protein li 99.0 1.2E-10 4E-15 110.0 3.9 48 248-295 28-76 (77)
44 2lri_C Autoimmune regulator; Z 99.0 1.2E-10 4.3E-15 106.7 3.1 48 246-296 12-59 (66)
45 1wev_A Riken cDNA 1110020M19; 99.0 1.3E-10 4.4E-15 112.9 2.4 52 245-296 15-72 (88)
46 1xwh_A Autoimmune regulator; P 99.0 1.5E-10 5.3E-15 106.4 2.5 50 245-297 7-56 (66)
47 2yql_A PHD finger protein 21A; 98.9 2.4E-10 8.1E-15 101.8 3.0 48 245-295 8-55 (56)
48 2lv9_A Histone-lysine N-methyl 98.9 3.5E-10 1.2E-14 112.1 3.9 51 1704-1754 24-76 (98)
49 2k16_A Transcription initiatio 98.9 1.9E-10 6.6E-15 108.5 1.8 52 1704-1755 14-69 (75)
50 3pur_A Lysine-specific demethy 98.9 2.4E-10 8.2E-15 140.9 2.5 79 1704-1784 36-122 (528)
51 2puy_A PHD finger protein 21A; 98.9 3.2E-10 1.1E-14 102.3 2.6 47 246-295 5-51 (60)
52 2l5u_A Chromodomain-helicase-D 98.9 2.9E-10 1E-14 102.9 2.3 49 244-295 9-57 (61)
53 2yt5_A Metal-response element- 98.9 2.5E-10 8.4E-15 105.1 1.4 52 246-297 6-62 (66)
54 3kv5_D JMJC domain-containing 98.9 1.4E-09 4.7E-14 136.0 8.4 138 418-571 268-408 (488)
55 2vpb_A Hpygo1, pygopus homolog 98.9 1.6E-10 5.5E-15 105.6 -1.3 48 1706-1753 7-65 (65)
56 3ask_A E3 ubiquitin-protein li 98.9 7.4E-10 2.5E-14 123.8 3.7 50 246-295 174-224 (226)
57 2ku3_A Bromodomain-containing 98.8 6.4E-10 2.2E-14 103.5 1.4 50 245-296 15-66 (71)
58 2kwj_A Zinc finger protein DPF 98.8 1.5E-09 5.1E-14 110.7 3.1 48 248-295 60-107 (114)
59 2l43_A N-teminal domain from h 98.8 7.9E-10 2.7E-14 107.3 0.7 51 245-297 24-76 (88)
60 2ri7_A Nucleosome-remodeling f 98.8 5E-10 1.7E-14 122.6 -1.6 53 1704-1756 4-61 (174)
61 3u5n_A E3 ubiquitin-protein li 98.8 2.1E-09 7.2E-14 120.9 3.3 52 243-297 4-55 (207)
62 3kv4_A PHD finger protein 8; e 98.8 7E-09 2.4E-13 127.8 7.9 142 414-571 225-373 (447)
63 2xb1_A Pygopus homolog 2, B-ce 98.7 1.2E-09 4E-14 109.6 0.4 47 1710-1756 6-63 (105)
64 3o36_A Transcription intermedi 98.7 4.2E-09 1.4E-13 116.3 3.8 49 246-297 4-52 (184)
65 2ysm_A Myeloid/lymphoid or mix 98.7 5.6E-09 1.9E-13 106.0 3.9 50 248-297 56-105 (111)
66 3v43_A Histone acetyltransfera 98.7 6.7E-09 2.3E-13 105.5 4.1 48 248-295 63-111 (112)
67 2ro1_A Transcription intermedi 98.6 9.4E-09 3.2E-13 113.8 3.9 49 246-297 2-50 (189)
68 3pur_A Lysine-specific demethy 98.6 1.2E-07 4.1E-12 117.2 13.8 136 418-571 298-442 (528)
69 3kqi_A GRC5, PHD finger protei 98.6 5.2E-09 1.8E-13 98.7 1.2 59 1449-1507 9-67 (75)
70 3lqh_A Histone-lysine N-methyl 98.6 5.1E-09 1.7E-13 114.7 1.0 49 1709-1757 3-66 (183)
71 1wep_A PHF8; structural genomi 98.6 1.7E-08 5.8E-13 96.2 4.4 67 1448-1521 10-76 (79)
72 2k16_A Transcription initiatio 98.6 9.7E-09 3.3E-13 96.9 2.1 51 246-296 18-68 (75)
73 2ysm_A Myeloid/lymphoid or mix 98.6 4.6E-08 1.6E-12 99.3 5.7 49 1449-1498 6-54 (111)
74 1we9_A PHD finger family prote 98.6 2.5E-08 8.6E-13 91.1 3.3 56 1448-1503 4-60 (64)
75 3v43_A Histone acetyltransfera 98.5 8.1E-08 2.8E-12 97.6 4.5 50 1449-1498 4-61 (112)
76 3o70_A PHD finger protein 13; 98.3 2E-07 7E-12 86.0 2.9 50 1447-1499 16-65 (68)
77 1wee_A PHD finger family prote 98.3 1.9E-07 6.6E-12 87.3 2.6 56 1446-1502 12-67 (72)
78 3o7a_A PHD finger protein 13 v 98.3 2.1E-07 7.2E-12 81.5 2.4 47 1450-1499 4-50 (52)
79 2kwj_A Zinc finger protein DPF 98.3 1.8E-07 6.2E-12 95.3 2.3 43 1712-1754 63-108 (114)
80 2kgg_A Histone demethylase jar 98.3 2.2E-07 7.5E-12 81.3 2.0 46 1453-1499 6-52 (52)
81 4gne_A Histone-lysine N-methyl 98.3 3.2E-07 1.1E-11 91.8 3.3 47 244-295 13-61 (107)
82 1wem_A Death associated transc 98.2 1.8E-07 6.3E-12 88.4 0.3 53 1449-1502 15-71 (76)
83 2lv9_A Histone-lysine N-methyl 98.2 8.6E-07 3E-11 87.8 4.1 48 248-297 30-77 (98)
84 1f62_A Transcription factor WS 98.1 7.1E-07 2.4E-11 77.8 2.3 43 1712-1754 5-50 (51)
85 2vpb_A Hpygo1, pygopus homolog 98.1 3.4E-07 1.1E-11 83.8 -1.2 51 1449-1499 7-64 (65)
86 2xb1_A Pygopus homolog 2, B-ce 98.1 5.7E-07 2E-11 90.1 0.1 52 1451-1502 4-62 (105)
87 1wew_A DNA-binding family prot 98.0 1.2E-06 4.3E-11 83.1 2.0 53 1448-1501 14-72 (78)
88 1wen_A Inhibitor of growth fam 98.0 3.3E-06 1.1E-10 78.7 4.7 52 1446-1502 12-66 (71)
89 1weu_A Inhibitor of growth fam 98.0 3.1E-06 1.1E-10 82.2 4.5 53 1444-1501 30-85 (91)
90 3lqh_A Histone-lysine N-methyl 98.0 1.6E-06 5.6E-11 94.9 2.0 52 1450-1501 2-63 (183)
91 2jmi_A Protein YNG1, ING1 homo 98.0 2.6E-06 8.7E-11 82.7 3.1 49 1447-1500 23-75 (90)
92 3c6w_A P28ING5, inhibitor of g 98.0 1.5E-06 5.1E-11 78.0 1.3 48 1448-1500 7-57 (59)
93 2g6q_A Inhibitor of growth pro 97.9 2E-06 7E-11 77.9 1.4 48 1448-1500 9-59 (62)
94 2rsd_A E3 SUMO-protein ligase 97.9 3.5E-06 1.2E-10 77.9 2.5 52 1449-1501 9-65 (68)
95 2ri7_A Nucleosome-remodeling f 97.9 1.8E-06 6.3E-11 94.3 -0.2 56 1447-1502 5-60 (174)
96 1x4i_A Inhibitor of growth pro 97.8 3.6E-06 1.2E-10 78.1 1.4 50 1448-1502 4-56 (70)
97 2l5u_A Chromodomain-helicase-D 97.8 4E-06 1.4E-10 75.8 1.0 49 1703-1754 6-58 (61)
98 2vnf_A ING 4, P29ING4, inhibit 97.8 4.3E-06 1.5E-10 75.3 1.2 49 1447-1500 7-58 (60)
99 1xwh_A Autoimmune regulator; P 97.8 6.1E-06 2.1E-10 75.8 1.6 48 1706-1756 6-57 (66)
100 2ku3_A Bromodomain-containing 97.7 4E-06 1.4E-10 78.0 0.1 51 1705-1755 14-67 (71)
101 2lbm_A Transcriptional regulat 97.7 4E-06 1.4E-10 87.8 -0.1 52 243-297 60-118 (142)
102 2l43_A N-teminal domain from h 97.7 3E-06 1E-10 82.2 -1.5 52 1705-1756 23-77 (88)
103 2yql_A PHD finger protein 21A; 97.7 6.7E-06 2.3E-10 73.1 0.8 44 1707-1753 8-55 (56)
104 2puy_A PHD finger protein 21A; 97.6 7.6E-06 2.6E-10 73.8 0.3 43 1709-1754 6-52 (60)
105 2ypd_A Probable JMJC domain-co 97.6 5.7E-05 2E-09 89.9 7.7 104 450-553 234-344 (392)
106 3k3o_A PHF8, PHD finger protei 97.6 0.00013 4.5E-09 87.8 10.3 138 418-571 149-289 (371)
107 1mm2_A MI2-beta; PHD, zinc fin 97.6 1.9E-05 6.6E-10 71.3 2.1 47 1705-1754 6-56 (61)
108 4gne_A Histone-lysine N-methyl 97.6 1.5E-05 5.3E-10 79.8 1.5 46 1705-1752 12-60 (107)
109 3pua_A GRC5, PHD finger protei 97.6 0.00017 5.8E-09 87.3 10.4 135 419-571 177-316 (392)
110 2e6s_A E3 ubiquitin-protein li 97.5 6.7E-05 2.3E-09 70.9 5.0 64 1435-1499 6-75 (77)
111 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.5 3.1E-05 1.1E-09 80.6 2.9 35 1722-1756 2-46 (140)
112 3kv9_A JMJC domain-containing 97.5 0.00017 5.9E-09 87.5 9.1 137 419-571 178-317 (397)
113 3rsn_A SET1/ASH2 histone methy 97.4 8.6E-05 2.9E-09 80.1 4.9 49 1707-1755 4-60 (177)
114 2e6r_A Jumonji/ARID domain-con 97.4 5.7E-05 2E-09 73.9 3.1 57 1444-1501 10-66 (92)
115 2yu1_A JMJC domain-containing 97.4 0.00074 2.5E-08 83.6 12.9 136 418-571 198-338 (451)
116 3asl_A E3 ubiquitin-protein li 97.3 0.00017 5.8E-09 67.0 4.8 55 1444-1499 13-67 (70)
117 2lri_C Autoimmune regulator; Z 97.3 7.1E-05 2.4E-09 68.7 2.2 43 1710-1755 15-60 (66)
118 3ql9_A Transcriptional regulat 97.2 2.1E-05 7E-10 81.1 -2.5 51 243-296 54-111 (129)
119 3k2o_A Bifunctional arginine d 97.2 0.00022 7.5E-09 85.6 5.5 117 417-543 173-297 (336)
120 2yt5_A Metal-response element- 97.2 8.2E-05 2.8E-09 68.2 1.3 49 1708-1756 7-63 (66)
121 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.2 0.00012 4.1E-09 76.1 2.7 40 1464-1503 1-46 (140)
122 3shb_A E3 ubiquitin-protein li 97.1 0.00044 1.5E-08 65.3 4.8 56 1443-1499 20-75 (77)
123 3u5n_A E3 ubiquitin-protein li 97.0 0.00019 6.6E-09 80.6 2.1 47 1707-1756 6-56 (207)
124 3o36_A Transcription intermedi 96.8 0.00041 1.4E-08 76.4 3.0 44 1710-1756 6-53 (184)
125 4gjz_A Lysine-specific demethy 96.8 0.0013 4.5E-08 74.1 7.2 109 416-536 124-235 (235)
126 3ask_A E3 ubiquitin-protein li 96.8 0.00067 2.3E-08 76.2 3.9 48 1452-1499 176-223 (226)
127 1fp0_A KAP-1 corepressor; PHD 96.3 0.0037 1.3E-07 60.3 5.4 51 1447-1501 22-72 (88)
128 4bbq_A Lysine-specific demethy 96.0 0.0029 1E-07 64.4 3.3 37 1720-1756 73-116 (117)
129 1wil_A KIAA1045 protein; ring 95.8 0.0015 5.1E-08 61.3 -0.1 50 245-295 14-75 (89)
130 1wev_A Riken cDNA 1110020M19; 95.7 0.0023 8E-08 62.0 0.8 53 1450-1502 16-73 (88)
131 3d8c_A Hypoxia-inducible facto 95.7 0.007 2.4E-07 73.2 5.1 111 415-536 182-296 (349)
132 3al5_A HTYW5, JMJC domain-cont 95.0 0.023 7.7E-07 68.4 6.3 106 415-539 166-277 (338)
133 2ro1_A Transcription intermedi 94.7 0.013 4.6E-07 64.7 3.2 42 1712-1756 7-51 (189)
134 3rsn_A SET1/ASH2 histone methy 92.2 0.079 2.7E-06 57.4 3.7 51 1451-1501 6-59 (177)
135 4bbq_A Lysine-specific demethy 91.8 0.052 1.8E-06 55.2 1.6 40 258-297 72-115 (117)
136 1wil_A KIAA1045 protein; ring 87.1 0.26 8.9E-06 46.5 2.3 53 1449-1502 14-77 (89)
137 3k1l_B Fancl; UBC, ring, RWD, 86.0 0.58 2E-05 55.5 5.0 85 1416-1500 270-369 (381)
138 1vrb_A Putative asparaginyl hy 85.6 1.4 4.8E-05 53.0 8.2 115 418-548 143-264 (342)
139 1x4j_A Ring finger protein 38; 83.4 0.27 9.3E-06 45.5 0.6 48 1447-1499 20-67 (75)
140 2kiz_A E3 ubiquitin-protein li 81.6 0.41 1.4E-05 43.4 1.0 48 1448-1500 12-59 (69)
141 1iym_A EL5; ring-H2 finger, ub 77.4 0.87 3E-05 39.2 1.7 45 1450-1499 5-50 (55)
142 2lbm_A Transcriptional regulat 75.6 1.1 3.9E-05 46.9 2.3 47 1705-1754 60-117 (142)
143 4diq_A Lysine-specific demethy 73.7 5.6 0.00019 49.7 8.1 106 417-545 165-274 (489)
144 2ecm_A Ring finger and CHY zin 73.6 1.1 3.9E-05 38.4 1.5 47 1449-1500 4-51 (55)
145 2ect_A Ring finger protein 126 73.4 3.1 0.00011 38.4 4.5 49 1448-1501 13-61 (78)
146 2ep4_A Ring finger protein 24; 72.9 0.93 3.2E-05 41.6 0.8 48 1448-1500 13-60 (74)
147 2l0b_A E3 ubiquitin-protein li 71.6 1 3.5E-05 43.4 0.7 47 1448-1499 38-84 (91)
148 3ql9_A Transcriptional regulat 71.3 1 3.4E-05 46.6 0.6 49 1449-1500 56-110 (129)
149 1v87_A Deltex protein 2; ring- 69.2 0.92 3.1E-05 45.4 -0.2 51 1451-1501 26-91 (114)
150 2csy_A Zinc finger protein 183 57.5 1.6 5.6E-05 40.8 -0.9 45 1449-1501 14-58 (81)
151 2d8t_A Dactylidin, ring finger 55.8 4.2 0.00015 36.9 1.7 46 1448-1501 13-58 (71)
152 2ecl_A Ring-box protein 2; RNF 55.6 3.4 0.00011 38.9 1.0 45 1450-1499 15-71 (81)
153 2ecn_A Ring finger protein 141 55.4 2.8 9.6E-05 37.9 0.4 45 1447-1500 12-56 (70)
154 1weq_A PHD finger protein 7; s 55.2 9.1 0.00031 36.7 3.8 50 1707-1756 25-81 (85)
155 2ysl_A Tripartite motif-contai 51.8 5 0.00017 36.4 1.4 48 1448-1500 18-65 (73)
156 3nw0_A Non-structural maintena 48.6 7.7 0.00026 44.2 2.6 90 1390-1500 136-225 (238)
157 2ecj_A Tripartite motif-contai 48.3 7.1 0.00024 33.6 1.8 45 1449-1498 14-58 (58)
158 1bor_A Transcription factor PM 48.2 12 0.00042 32.4 3.3 42 1448-1500 4-45 (56)
159 2ysj_A Tripartite motif-contai 47.3 4.7 0.00016 35.6 0.5 46 1448-1498 18-63 (63)
160 2ct2_A Tripartite motif protei 46.6 5.9 0.0002 37.2 1.1 52 1448-1501 13-65 (88)
161 2ct0_A Non-SMC element 1 homol 45.0 7.4 0.00025 36.4 1.4 47 1450-1501 15-61 (74)
162 2xdv_A MYC-induced nuclear ant 44.7 40 0.0014 41.8 8.3 105 415-546 138-247 (442)
163 3fl2_A E3 ubiquitin-protein li 44.4 10 0.00035 38.3 2.6 42 1452-1500 54-95 (124)
164 2y43_A E3 ubiquitin-protein li 43.9 8.4 0.00029 37.3 1.7 42 1452-1500 24-65 (99)
165 3ng2_A RNF4, snurf, ring finge 41.4 3.3 0.00011 37.4 -1.6 47 1449-1500 9-59 (71)
166 1jm7_A BRCA1, breast cancer ty 41.2 12 0.00042 36.8 2.5 44 1452-1500 23-66 (112)
167 2ecv_A Tripartite motif-contai 40.9 8.8 0.0003 35.6 1.3 51 1448-1501 17-68 (85)
168 2ea6_A Ring finger protein 4; 40.9 4.6 0.00016 36.0 -0.6 47 1448-1499 13-63 (69)
169 1chc_A Equine herpes virus-1 r 39.9 7.2 0.00025 34.8 0.5 45 1450-1501 5-49 (68)
170 4ayc_A E3 ubiquitin-protein li 39.6 6.1 0.00021 40.9 -0.0 39 1452-1498 55-93 (138)
171 2xeu_A Ring finger protein 4; 39.4 3.5 0.00012 36.2 -1.6 45 1451-1500 4-52 (64)
172 2ecw_A Tripartite motif-contai 38.5 9.8 0.00034 35.2 1.2 50 1449-1501 18-68 (85)
173 3l11_A E3 ubiquitin-protein li 38.3 10 0.00035 37.8 1.4 43 1451-1500 16-58 (115)
174 3lrq_A E3 ubiquitin-protein li 37.8 6.3 0.00022 38.5 -0.3 44 1451-1500 23-66 (100)
175 2ckl_B Ubiquitin ligase protei 36.5 7.2 0.00025 41.6 -0.1 43 1451-1499 55-97 (165)
176 2egp_A Tripartite motif-contai 36.4 13 0.00046 34.0 1.8 50 1449-1501 11-62 (79)
177 4a0k_B E3 ubiquitin-protein li 36.3 8.7 0.0003 39.0 0.5 44 1451-1499 49-107 (117)
178 1gvd_A MYB proto-oncogene prot 35.4 29 0.001 29.6 3.6 39 134-185 13-51 (52)
179 3dpl_R Ring-box protein 1; ubi 35.2 10 0.00035 37.8 0.8 45 1451-1500 38-97 (106)
180 1e4u_A Transcriptional repress 35.0 12 0.00039 35.2 1.1 48 1449-1501 10-59 (78)
181 2djb_A Polycomb group ring fin 33.9 12 0.00039 34.1 0.9 47 1448-1501 13-59 (72)
182 3ztg_A E3 ubiquitin-protein li 33.8 9 0.00031 36.5 0.1 48 1448-1500 11-58 (92)
183 2d8s_A Cellular modulator of i 33.6 12 0.00043 35.2 1.1 50 1448-1500 13-66 (80)
184 3a1b_A DNA (cytosine-5)-methyl 33.3 7.5 0.00026 41.4 -0.6 52 243-297 76-135 (159)
185 2ecy_A TNF receptor-associated 32.4 10 0.00036 33.7 0.3 45 1449-1500 14-58 (66)
186 1wfp_A Zinc finger (AN1-like) 31.2 50 0.0017 30.8 4.5 29 625-655 25-53 (74)
187 1guu_A C-MYB, MYB proto-oncoge 31.1 41 0.0014 28.7 3.8 39 134-185 13-51 (52)
188 2yur_A Retinoblastoma-binding 30.2 16 0.00054 33.5 1.1 47 1449-1500 14-60 (74)
189 1vyx_A ORF K3, K3RING; zinc-bi 29.0 9.9 0.00034 33.9 -0.5 50 1447-1499 3-54 (60)
190 1jm7_B BARD1, BRCA1-associated 28.0 26 0.0009 35.0 2.4 39 1452-1499 24-62 (117)
191 1ity_A TRF1; helix-turn-helix, 27.7 47 0.0016 30.1 3.8 40 134-185 20-60 (69)
192 2dim_A Cell division cycle 5-l 27.3 51 0.0017 30.0 4.0 39 134-185 19-57 (70)
193 2pv0_B DNA (cytosine-5)-methyl 27.0 7.6 0.00026 47.0 -2.1 52 243-297 90-149 (386)
194 1wff_A Riken cDNA 2810002D23 p 26.5 58 0.002 31.2 4.2 29 625-655 25-54 (85)
195 1x41_A Transcriptional adaptor 26.1 65 0.0022 28.4 4.3 38 135-185 19-56 (60)
196 2ckl_A Polycomb group ring fin 25.9 14 0.00049 36.3 0.0 43 1451-1500 16-58 (108)
197 3uun_A Dystrophin; triple heli 25.8 4.4E+02 0.015 25.2 12.1 41 872-912 4-44 (119)
198 2d9a_A B-MYB, MYB-related prot 25.2 61 0.0021 28.5 4.0 39 134-185 18-56 (60)
199 1wim_A KIAA0161 protein; ring 25.0 17 0.00058 34.9 0.3 51 1449-1499 4-59 (94)
200 3uul_A Utrophin; spectrin repe 24.9 4.6E+02 0.016 25.1 13.0 41 872-912 4-44 (118)
201 1wfh_A Zinc finger (AN1-like) 24.7 31 0.0011 31.3 1.9 28 626-655 16-43 (64)
202 1rmd_A RAG1; V(D)J recombinati 24.3 20 0.00069 35.6 0.7 69 1451-1538 24-92 (116)
203 1wg2_A Zinc finger (AN1-like) 22.3 36 0.0012 30.9 1.9 28 626-655 16-43 (64)
204 1z6u_A NP95-like ring finger p 21.7 17 0.00057 38.3 -0.5 42 1452-1500 80-121 (150)
205 2elk_A SPCC24B10.08C protein; 21.1 88 0.003 27.4 4.1 39 134-184 19-57 (58)
206 2lq6_A Bromodomain-containing 20.9 30 0.001 33.3 1.1 34 1704-1738 13-49 (87)
207 1t1h_A Gspef-atpub14, armadill 20.1 33 0.0011 31.4 1.2 45 1449-1500 7-51 (78)
208 2k1p_A Zinc finger RAN-binding 20.1 39 0.0013 26.6 1.4 14 284-297 3-16 (33)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=2.9e-73 Score=675.14 Aligned_cols=235 Identities=32% Similarity=0.629 Sum_probs=205.5
Q ss_pred ccchHHHHHHHHHHhhhccCCCCcchhhhhhhhhhHhccCCCccccccccCCCCCCCCCCCCCcCCCCCCCccccccccc
Q 000213 308 RYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEY 387 (1849)
Q Consensus 308 ~yTLeeF~~~Ad~~k~~~f~~~~~~~~~~E~efW~~v~~~~~~v~V~yGaDi~~~~~gSgFp~~~~~~~~~~~~~~~~~y 387 (1849)
.||+.+|+++|+.++ +......+.++||++||++|.. ++|+||+|++++.|++|
T Consensus 113 ~~tl~~f~~~a~~~~--~~~p~~~~~~~lE~~fWr~v~~----~~~~YgaD~~gS~f~~~-------------------- 166 (381)
T 2ox0_A 113 AMTVREFRKIANSDK--YCTPRYSEFEELERKYWKNLTF----NPPIYGADVNGTLYEKH-------------------- 166 (381)
T ss_dssp CEEHHHHHHHHHSTT--TSCCCCSSHHHHHHHHHHHTTS----SCCEEEEEEECCCSCTT--------------------
T ss_pred ccCHHHHHHHhcccc--cCCCccCCHHHHHHHHHhhCCc----CCceeecCCCcccCCCC--------------------
Confidence 456666666666433 2222344678999999999984 57899999986555432
Q ss_pred CCCCccccCCCCCcchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHH
Q 000213 388 CNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVM 467 (1849)
Q Consensus 388 ~~~~WNL~nlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~ 467 (1849)
.++|||||||.+.++||++++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++|
T Consensus 167 -~~~WNL~~Lp~ll~~ll~~~~~~I~GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~ 245 (381)
T 2ox0_A 167 -VDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLA 245 (381)
T ss_dssp -CCSSCTTCCCCGGGHHHHHHCCCCBTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred -CCCCchhhhhhHHHHHHHhcCCCCCCcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhh
Q 000213 468 RSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFG 547 (1849)
Q Consensus 468 ~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~ 547 (1849)
++.+|+++.+|+++|+|++++++|+.|+++||||++++|+|||||||||||||+|||+||||+||||||+++|+++|..|
T Consensus 246 ~~~~P~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a 325 (381)
T 2ox0_A 246 KGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQA 325 (381)
T ss_dssp HHHSHHHHHHCTTGGGGSCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHC
T ss_pred HHhChhhhhcchHHhhccccccCHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHHHhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhcCCCCCChHHHHHHHh
Q 000213 548 ADLYQQYHKAAVLSHEELLCVVA 570 (1849)
Q Consensus 548 ~~~y~~~~~~~vfs~~~Ll~~~A 570 (1849)
.+.+... ..-.++|+.++-++-
T Consensus 326 ~~c~c~~-~~v~i~~d~~~~~~~ 347 (381)
T 2ox0_A 326 VLCSCRK-DMVKISMDVFVRKFQ 347 (381)
T ss_dssp CCCCSST-TCCCCCCHHHHHHHC
T ss_pred hhccccC-CceeecHHHHHHHhC
Confidence 7654322 233456777765543
No 2
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=6.9e-71 Score=645.82 Aligned_cols=235 Identities=34% Similarity=0.664 Sum_probs=210.9
Q ss_pred cccchHHHHHHHHHHhhhccCCCCcchhhhhhhhhhHhccCCCccccccccCCCCCCCCCCCCCcCCCCCCCcccccccc
Q 000213 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNE 386 (1849)
Q Consensus 307 k~yTLeeF~~~Ad~~k~~~f~~~~~~~~~~E~efW~~v~~~~~~v~V~yGaDi~~~~~gSgFp~~~~~~~~~~~~~~~~~ 386 (1849)
+.||+.+|+++|+.. +|...+..+.++||++||+.+... .|+||||++ ||+||.
T Consensus 94 k~~t~~~f~~~a~~~--~~~~p~~~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~---------------- 147 (354)
T 3dxt_A 94 KAMTVGEYRHLANSK--KYQTPPHQNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDE---------------- 147 (354)
T ss_dssp CCEEHHHHHHHHTST--TTSCCCCSSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCT----------------
T ss_pred CccCHHHHHHHHhhh--hccCCCCCCHHHHHHHHhhhcccC----CceeeecCC----CcccCC----------------
Confidence 568999999999853 244444567889999999988753 489999998 788873
Q ss_pred cCCCCccccCCCCCcchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHH
Q 000213 387 YCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1849)
Q Consensus 387 y~~~~WNL~nlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1849)
..++|||||||.+.++||++++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++
T Consensus 148 -~~~~WNL~~L~~~~~~Ll~~~~~~I~GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l 226 (354)
T 3dxt_A 148 -NTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERL 226 (354)
T ss_dssp -TCCSSCTTSSCCHHHHHHHHHCCCCCCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred -CcchhhhhhccchhHHHHhhcCCCCCCccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHH
Confidence 1479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhh
Q 000213 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGF 546 (1849)
Q Consensus 467 ~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~ 546 (1849)
|++.+|+.+..|++||+|++++++|+.|+++||||++++|+|||||||||||||+|||+|||++||||||+++|+++|..
T Consensus 227 ~k~~~p~~~~~c~~fL~h~~~lisP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~ 306 (354)
T 3dxt_A 227 ARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKM 306 (354)
T ss_dssp HHHHSHHHHHHCTTGGGGCCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHH
T ss_pred HHHhCchhhhhcHHHHhcCcccCCHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHhcCCCCCChHHHHHHH
Q 000213 547 GADLYQQYHKAAVLSHEELLCVV 569 (1849)
Q Consensus 547 ~~~~y~~~~~~~vfs~~~Ll~~~ 569 (1849)
|...+.. .....|+|+.++..+
T Consensus 307 A~~C~C~-~~~v~i~~d~~~~~~ 328 (354)
T 3dxt_A 307 ASQCSCG-EARVTFSMDAFVRIL 328 (354)
T ss_dssp CCCCCSS-SCCCCHHHHHHHHHH
T ss_pred ccccccc-CccceecHHHHHHhh
Confidence 8665543 223447777776544
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=1.1e-69 Score=638.15 Aligned_cols=215 Identities=34% Similarity=0.683 Sum_probs=167.6
Q ss_pred ccchHHHHHHHHHHhhhccCC-CCcchhhhhhhhhhHhccCCCccccccccCCCCCCCCCCCCCcCCCCCCCcccccccc
Q 000213 308 RYTVESFRRVADRAKKKRFRS-GSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNE 386 (1849)
Q Consensus 308 ~yTLeeF~~~Ad~~k~~~f~~-~~~~~~~~E~efW~~v~~~~~~v~V~yGaDi~~~~~gSgFp~~~~~~~~~~~~~~~~~ 386 (1849)
.+++++|+.+++.++...-.- .....++||++||+.|.. .+|+||||+ +||+||.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lE~~yW~~~~~----~~p~YgaD~----~GS~F~~---------------- 194 (373)
T 3opt_A 139 SFNIDDFEQFRTEYTIDLSDFQNTERLKFLEEYYWKTLNF----TTPMYGADT----PGSIFPE---------------- 194 (373)
T ss_dssp CCCHHHHHHHTTTSSCCCTTSSCHHHHHHHHHHHHHTTTT----SCCEEEEEE----ECCCSCT----------------
T ss_pred ccchHHHHHHHHhhccchhhccCcchHHHHHHHHHHhccC----CCceEecCC----CCCCcCC----------------
Confidence 357778877654433221000 113457999999999985 468999996 5899983
Q ss_pred cCCCCccccCCCCCcchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHH
Q 000213 387 YCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1849)
Q Consensus 387 y~~~~WNL~nlp~~~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1849)
..++||||||| +||+|++.+|+|||+||||+||+||+||||+|||+||||||+|+|+||+||+||++++++||++
T Consensus 195 -~~~~WNL~~Lp----~lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l 269 (373)
T 3opt_A 195 -GLNVWNVAKLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKF 269 (373)
T ss_dssp -TCCSSCTTSCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHH
T ss_pred -CCCccChhhhh----hHHHHhcccCCCcchhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHH
Confidence 25899999999 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhh
Q 000213 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGF 546 (1849)
Q Consensus 467 ~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~ 546 (1849)
|++.+|+++.+|+++|+|++++++|+.|+++||||++++|+|||||||||||||+|||+||||+||||||+++|+++|..
T Consensus 270 ~k~~~p~~~~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~ 349 (373)
T 3opt_A 270 MQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKK 349 (373)
T ss_dssp HHHSSHHHHSSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC--------
T ss_pred HHHhChhhhhhCHHHhhCCcccCCHHHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHH
Q 000213 547 GADLY 551 (1849)
Q Consensus 547 ~~~~y 551 (1849)
|....
T Consensus 350 a~~C~ 354 (373)
T 3opt_A 350 AGKCH 354 (373)
T ss_dssp -----
T ss_pred CccCc
Confidence 87544
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=6.6e-55 Score=536.57 Aligned_cols=283 Identities=20% Similarity=0.208 Sum_probs=245.2
Q ss_pred cCCCCccccCCCC-----CcchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHH
Q 000213 387 YCNSPWNLNNLPK-----LKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAG 461 (1849)
Q Consensus 387 y~~~~WNL~nlp~-----~~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~ 461 (1849)
|..+.|||++||. ..||+|+|++..|+|||+|||||||+||+||||+||++++||||||+|++|+||+||+++++
T Consensus 226 w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~ 305 (531)
T 3avr_A 226 WKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWG 305 (531)
T ss_dssp THHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHH
T ss_pred hHHHHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHH
Confidence 3446889999997 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCch
Q 000213 462 AFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 541 (1849)
Q Consensus 462 kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl 541 (1849)
+||+++++...++ ++..+|++|+.|.++|||||+++|+|||||||||||||||||+|||++||||||+++|+
T Consensus 306 k~e~l~~k~~~~~--------~~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~ 377 (531)
T 3avr_A 306 VLNDFCEKNNLNF--------LMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTAC 377 (531)
T ss_dssp HHHHHHHHTTCCT--------TTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSHH
T ss_pred HHHHHHHHcCCCh--------hhceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCchH
Confidence 9999999875432 24568899999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhHHHHH---HhcCCCCCChHHHHHHHhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCCCCCC
Q 000213 542 PHGGFGADLYQ---QYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKC 616 (1849)
Q Consensus 542 ~~g~~~~~~y~---~~~~~~vfs~~~Ll~~~A~~~--~~~~~~~~l~~~l~~~~~~E~~~r~~l~~~gi~~~~~~~~~~~ 616 (1849)
+++. |+++|. ..+..++|||++|+|+||++. .|..+...++..|.+.+..++.+|+.+.+.|+... ...+
T Consensus 378 q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~~d~~l~~~ik~~L~rsl~~~~~~~~~l~~~g~~i~--~~~~-- 452 (531)
T 3avr_A 378 QYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQTLREALIAAGKEII--WHGR-- 452 (531)
T ss_dssp HHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE--ECCC--
T ss_pred HHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE--eccc--
Confidence 9975 777775 445689999999999999864 56667888898899999999999999999887421 1111
Q ss_pred CCCCCCccccccccccccccccceecccC----CCceeeccchhhhccCCCCceEEEEEcCHHHHHHHHHHHhc
Q 000213 617 PEYVGTEEDPTCIICRQYLYLSAVACRCR----PAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDR 686 (1849)
Q Consensus 617 ~~~~~~~~~~~C~~C~~~~fls~v~c~~~----~~~~~CL~h~~~~c~c~~~~~~l~yRy~~~eL~~l~~~~~~ 686 (1849)
...+..++|..|+++||++.++|..+ ...++|++|+...|.| .++++++|||+++||.+++++|+.
T Consensus 453 ---~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL~~~yd~f~~ 522 (531)
T 3avr_A 453 ---TKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDLMQVYDQFTL 522 (531)
T ss_dssp ---CTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHHHHHHHTCCC
T ss_pred ---cCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhcCcc-ccceEEEEEcCHHHHHHHHHheEe
Confidence 11235689999999999999988531 2347899999875544 578999999999999999999965
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=7.2e-52 Score=499.31 Aligned_cols=279 Identities=19% Similarity=0.140 Sum_probs=242.0
Q ss_pred ccccCCCCC-----cchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHH
Q 000213 392 WNLNNLPKL-----KGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKV 466 (1849)
Q Consensus 392 WNL~nlp~~-----~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~ 466 (1849)
.+|++||.. .||+|+|++..|+|||+||||+||+||+||||+||++++||||||+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHhhCcHHhCcCCCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHH
Confidence 446666654 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCc--hhch
Q 000213 467 MRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW--LPHG 544 (1849)
Q Consensus 467 ~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~W--l~~g 544 (1849)
+++..++ ++ +..+|++|+.|+++|||||+++|+|||||||||||||||||+|||+++|||||+++| ++.|
T Consensus 286 ~~k~~~d-------~l-~~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHGVD-------YL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTTCC-------TT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHhCcc-------hh-hccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHHHHHHH
Confidence 9987654 33 346788999999999999999999999999999999999999999999999999997 5678
Q ss_pred hhhHHHHHHhcCCCCCChHHHHHHHhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCCCCCCCCCCCC
Q 000213 545 GFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGT 622 (1849)
Q Consensus 545 ~~~~~~y~~~~~~~vfs~~~Ll~~~A~~~--~~~~~~~~l~~~l~~~~~~E~~~r~~l~~~gi~~~~~~~~~~~~~~~~~ 622 (1849)
.++.++|+..++.++|||++|+|+||++. .|.+++..++..|+|.+...+..++.+.+.|..-...- + ...
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~d~~l~~liK~~L~rSL~~~~~~~d~~~~~g~~i~~~~--~-----~~~ 430 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRAGKKIAYQG--R-----VKD 430 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEECC--C-----CTT
T ss_pred HHHHHHHHHhCcCcccChHHHHHHHHhhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEeecC--c-----CCC
Confidence 88899999999999999999999999864 78889999999999999999999999998887432111 0 111
Q ss_pred ccccccccccccccccceecccC--C--CceeeccchhhhccCCCCceEEEEEcCHHHHHHHHHHHhc
Q 000213 623 EEDPTCIICRQYLYLSAVACRCR--P--AAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDR 686 (1849)
Q Consensus 623 ~~~~~C~~C~~~~fls~v~c~~~--~--~~~~CL~h~~~~c~c~~~~~~l~yRy~~~eL~~l~~~~~~ 686 (1849)
+..++|..|...+|...++...+ + ..++|+.|+..... ...++++++||+++||.+++|+|..
T Consensus 431 ~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~~-~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 431 EPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSA-GLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp CCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHSTT-TTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CcccccCCCCeEEEEEEEEEecCCCCCccceEChHhhhhcCC-CcceEEEEEEccHHHHHHHHhCeEe
Confidence 23479999999999766665432 1 24789999987543 5688999999999999999999965
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=395.86 Aligned_cols=154 Identities=22% Similarity=0.203 Sum_probs=138.3
Q ss_pred CccccCCCCC-----cchhhhhcccccCCcccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHH
Q 000213 391 PWNLNNLPKL-----KGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEK 465 (1849)
Q Consensus 391 ~WNL~nlp~~-----~~slL~~~~~~i~Gv~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~ 465 (1849)
-.+|+.||.. .||||+|++.+|+|||+||||+||+||+||||+||++++||||||+|++|+||+||++++++||+
T Consensus 171 ~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~ 250 (332)
T 2xxz_A 171 LQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISA 250 (332)
T ss_dssp HHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHH
T ss_pred HHHHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHH
Confidence 4468888865 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcccCChhhhhhhccccChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchh
Q 000213 466 VMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGG 545 (1849)
Q Consensus 466 ~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~ 545 (1849)
+|++..++++ +..+|++|+.|.++|||||+++|+|||||||||||||||||+|||+++|||||+++|+++.
T Consensus 251 l~~k~~~d~~--------~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~~- 321 (332)
T 2xxz_A 251 FCDRHGVDYL--------TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQ- 321 (332)
T ss_dssp HHHHTTCCTT--------TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGGGG-
T ss_pred HHHhcCCchh--------hceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHHHH-
Confidence 9998766543 3467899999999999999999999999999999999999999999999999999999875
Q ss_pred hhHHHHHH
Q 000213 546 FGADLYQQ 553 (1849)
Q Consensus 546 ~~~~~y~~ 553 (1849)
.|+++|+-
T Consensus 322 ~a~erye~ 329 (332)
T 2xxz_A 322 LALERYEW 329 (332)
T ss_dssp GC------
T ss_pred HHHHHHHh
Confidence 78888864
No 7
>2kk0_A AT-rich interactive domain-containing protein 3A; DEAD ringer, AT-rich interaction domain, NESG, ARID, cytopla binding, nucleus, phosphoprotein; NMR {Homo sapiens}
Probab=99.88 E-value=2.9e-23 Score=219.71 Aligned_cols=117 Identities=25% Similarity=0.379 Sum_probs=108.3
Q ss_pred CccccCCCcccccccccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhc
Q 000213 71 PFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150 (1849)
Q Consensus 71 pf~id~~~F~F~tR~Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~ 150 (1849)
..++|.++|+|+||+|.||+|++.++ +..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|++
T Consensus 9 ~~~~~~~~f~F~~r~q~L~eL~~~~~---~~~Fl~~L~~F~~~-rG~pl~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~ 84 (145)
T 2kk0_A 9 SHMPDHGDWTYEEQFKQLYELDGDPK---RKEFLDDLFSFMQK-RGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVIN 84 (145)
T ss_dssp CCSCCTTSCCCCCCCTHHHHTTCCHH---HHHHHHHHHHHHHH-TTCCCSSCCEETTEECCHHHHHHHHHHHTCHHHHHH
T ss_pred ccccCCCCceecCccccHhhccCchh---HHHHHHHHHHHHHH-cCCCCccceeECCEEecHHHHHHHHHHhCCHHHhcc
Confidence 56899999999999999999999876 68999999999977 899998888999999999999999999999999999
Q ss_pred ccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhcHHHHHhh
Q 000213 151 EKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYDYEKYYNK 192 (1849)
Q Consensus 151 ~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~ 192 (1849)
+++|.+|++.|+++...++ +++.|+++|+|||+|||.|.++
T Consensus 85 ~~~W~~Va~~lg~~~~~ts-a~~~Lk~~Y~k~L~~yE~~~~g 125 (145)
T 2kk0_A 85 KKLWREITKGLNLPTSITS-AAFTLRTQYMKYLYPYECEKRG 125 (145)
T ss_dssp HTCHHHHHHHTTCCTTSTT-HHHHHHHHHHHHSSHHHHHHTC
T ss_pred cCcHHHHHHHhCCCCCcCc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999887555 4569999999999999999864
No 8
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.4e-21 Score=199.54 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=97.5
Q ss_pred ccccccccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHh
Q 000213 80 TFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFR 159 (1849)
Q Consensus 80 ~F~tR~Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~ 159 (1849)
.|+||+|+||++++.++. +..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|.++|||+.|++.++|.+|++
T Consensus 2 ~~~pr~Q~ln~~e~~~~~--~~~F~~~L~~F~~~-~G~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~ 78 (116)
T 2li6_A 2 SLNPALQEKISTELNNKQ--YELFMKSLIENCKK-RNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQ 78 (116)
T ss_dssp CCCCCSSBCCCSSSSHHH--HHHHHHHHHHHHHT-TTSCCSSCCCCBSCCCSTTHHHHHHHHHTSHHHHHHTTCHHHHHH
T ss_pred CCCchhhhhhcccccchh--HHHHHHHHHHHHHH-cCCCCCCCceECCEeecHHHHHHHHHHhcCHHHccccCcHHHHHH
Confidence 499999999999998874 78999999999976 899998888999999999999999999999999999999999999
Q ss_pred HhcCCCccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000213 160 FVRSNRKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1849)
Q Consensus 160 ~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1849)
.||++. ++.|+++|+|||+|||.|+.+.
T Consensus 79 ~lg~~~------~~~Lr~~Y~k~L~~yE~~~~~~ 106 (116)
T 2li6_A 79 RLQISD------YQQLESIYFRILLPYERHMISQ 106 (116)
T ss_dssp HHTSCC------TTHHHHHHHHHHSHHHHHHHHT
T ss_pred HhCCCh------HHHHHHHHHHHHHHHHHHHhCc
Confidence 999987 2479999999999999998653
No 9
>2lm1_A Lysine-specific demethylase LID; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Drosophila melanogaster}
Probab=99.84 E-value=2e-21 Score=196.10 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=95.6
Q ss_pred cccccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhc
Q 000213 83 TKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVR 162 (1849)
Q Consensus 83 tR~Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~ 162 (1849)
||+|.||+|++.++. +..|+.+|.+||+. +|++++ +|+|+|++||||+||++|+++|||++|+++++|.+|++.||
T Consensus 1 ~R~Q~L~el~~~~~~--~~~F~~~L~~F~~~-~g~~l~-~P~i~gk~vdL~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg 76 (107)
T 2lm1_A 1 PRVQRLNELEAKTRV--KLNFLDQIAKFWEL-QGSSLK-IPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQ 76 (107)
T ss_dssp CCCSSSCSSCCSSHH--HHHHHHHHHHHHTT-TCCCCS-CCCTTTSSCCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTT
T ss_pred CceeehhhccCCchH--HHHHHHHHHHHHHH-cCCCCC-CCeECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhC
Confidence 799999999998864 78999999999976 899996 66789999999999999999999999999999999999999
Q ss_pred CCCccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000213 163 SNRKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1849)
Q Consensus 163 ~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1849)
+|.. +++++.|+++|+|||+|||.|.++.
T Consensus 77 ~~~~--~~~~~~lk~~Y~k~L~~yE~~~~~~ 105 (107)
T 2lm1_A 77 YPSS--KSVGATLKAHYERILHPFEVYTSGK 105 (107)
T ss_dssp CCCC--HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCC--CcHHHHHHHHHHHHhHHHHHHHhcC
Confidence 9875 4466799999999999999998753
No 10
>2cxy_A BAF250B subunit, HBAF250B; DNA-binding domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Homo sapiens} PDB: 2eh9_A 1ryu_A
Probab=99.83 E-value=6.1e-21 Score=197.42 Aligned_cols=107 Identities=23% Similarity=0.343 Sum_probs=95.8
Q ss_pred cccccccccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHH
Q 000213 79 FTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVF 158 (1849)
Q Consensus 79 F~F~tR~Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va 158 (1849)
-.|+||+|.||+|++.++ ++.|+.+|.+||+. +|+++..+|+|+|++||||+||++|+++|||++|+++++|.+|+
T Consensus 4 ~~f~~r~Q~L~el~~~~~---~~~Fl~~L~~F~~~-rG~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va 79 (125)
T 2cxy_A 4 GSSGEKITKVYELGNEPE---RKLWVDRYLTFMEE-RGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 79 (125)
T ss_dssp ---CCBTTHHHHSCCCTT---HHHHHHHHHHHHHH-TTCCCCBCCEETTEECCHHHHHHHHHHHTSHHHHHHHTCHHHHH
T ss_pred CccccceeeHHhccCchh---HHHHHHHHHHHHHH-cCCCCCCCeeECCEeecHHHHHHHHHHcCCHHHhcccCcHHHHH
Confidence 369999999999999775 56799999999977 89999888889999999999999999999999999999999999
Q ss_pred hHhcCCCccchhhHHHHHHHHHHhhhcHHHHHh
Q 000213 159 RFVRSNRKISDCARHVLCQLYYKHLYDYEKYYN 191 (1849)
Q Consensus 159 ~~l~~~~~~~s~~~~~Lk~~Y~kyL~pYE~~~~ 191 (1849)
+.|+++.. +++++.||++|+|||+|||.+..
T Consensus 80 ~~lg~~~~--~s~~~~Lk~~Y~k~L~~yE~~~~ 110 (125)
T 2cxy_A 80 TNLNVGTS--SSAASSLKKQYIQYLFAFECKIE 110 (125)
T ss_dssp HHTTSCSS--HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHhCCCCC--CcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999863 45667999999999999999964
No 11
>2eqy_A RBP2 like, jumonji, at rich interactive domain 1B; ARID domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=186.25 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=93.5
Q ss_pred ccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCC
Q 000213 86 QAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNR 165 (1849)
Q Consensus 86 Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~ 165 (1849)
|.||+|++.+|. +..|+.+|.+||+. +|+++ .+|+|+|++||||+||++|+++|||++||++|+|.+|++.||++.
T Consensus 2 ~~Lnele~~~~~--~~~Fl~~L~~F~~~-rG~~l-~~P~i~gk~lDLy~Ly~~V~~~GG~~~V~~~k~W~~V~~~lg~~~ 77 (122)
T 2eqy_A 2 SSGSSGEAQTRV--KLNFLDQIAKYWEL-QGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAP 77 (122)
T ss_dssp CCCCCCCCSHHH--HHHHHHHHHHHHHH-HTCCC-CCCBSSSSBCCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCS
T ss_pred CccccccccchH--HHHHHHHHHHHHHH-cCCCC-CCCeECCEeccHHHHHHHHHHccCHHHHcCCCcHHHHHHHhCCCC
Confidence 789999998874 88999999999977 89999 567789999999999999999999999999999999999999987
Q ss_pred ccchhhHHHHHHHHHHhhhcHHHHHhhhcc
Q 000213 166 KISDCARHVLCQLYYKHLYDYEKYYNKLNK 195 (1849)
Q Consensus 166 ~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~~~ 195 (1849)
. + .+++.||++|+|||+|||.|.++...
T Consensus 78 ~-~-~~~~~Lr~~Y~k~L~~yE~~~~~~~~ 105 (122)
T 2eqy_A 78 G-K-AVGSHIRGHYERILNPYNLFLSGDSL 105 (122)
T ss_dssp S-S-HHHHHHHHHHHHTHHHHHHHHHCCTT
T ss_pred C-C-cHHHHHHHHHHHHhHHHHHHHhcCCc
Confidence 4 2 35569999999999999999986543
No 12
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=99.78 E-value=3.1e-19 Score=182.52 Aligned_cols=103 Identities=22% Similarity=0.375 Sum_probs=92.8
Q ss_pred cchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCc
Q 000213 87 AIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRK 166 (1849)
Q Consensus 87 ~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~ 166 (1849)
.||+|++.+|. +..|+.+|.+||+. +|++++ +|+|+|++||||+||++|+++|||++|+++++|.+|++.||++..
T Consensus 1 ~Lnele~~~r~--~~~Fl~~L~~F~~~-rG~~l~-~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~ 76 (117)
T 2jrz_A 1 SMNELEAQTRV--KLNYLDQIAKFWEI-QGSSLK-IPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPG 76 (117)
T ss_dssp CTHHHHTSTTT--HHHHHHHHHHHHHT-TTSCCC-CCEETTEECCHHHHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTT
T ss_pred CccccccchhH--HHHHHHHHHHHHHH-cCCCCC-CCeECCEeecHHHHHHHHHHccCHHHhcccCcHHHHHHHhCCCCC
Confidence 48999998874 78999999999976 899996 577899999999999999999999999999999999999999876
Q ss_pred cchhhHHHHHHHHHHhhhcHHHHHhhhcc
Q 000213 167 ISDCARHVLCQLYYKHLYDYEKYYNKLNK 195 (1849)
Q Consensus 167 ~~s~~~~~Lk~~Y~kyL~pYE~~~~~~~~ 195 (1849)
+ .+++.||++|+|||+|||.|.++...
T Consensus 77 -~-~a~~~Lk~~Y~k~L~~yE~~~~~~~~ 103 (117)
T 2jrz_A 77 -K-NIGSLLRSHYERIVYPYEMYQSGANL 103 (117)
T ss_dssp -C-THHHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred -C-cHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3 45678999999999999999987654
No 13
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=99.76 E-value=3.9e-19 Score=181.52 Aligned_cols=101 Identities=22% Similarity=0.355 Sum_probs=90.6
Q ss_pred cchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCc
Q 000213 87 AIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRK 166 (1849)
Q Consensus 87 ~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~ 166 (1849)
.+++|..||.+ ...|+.+|.+||+. +|++++.+|+|+|++||||+||++|+++|||++||+.|+|++|++.|++|..
T Consensus 2 ~~~~~~~r~~~--~~~Fl~~L~~F~~~-rGtpl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~ 78 (121)
T 2rq5_A 2 PLGSLGRRWGP--NVQRLACIKKHLRS-QGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKT 78 (121)
T ss_dssp CCCCCSSCCCH--HHHHHHHHHHHHHH-TTCCCSSCCEETTEECCHHHHHHHHHHTTSHHHHHHTTCHHHHHHHTCCCTT
T ss_pred cHHHhhHhcCC--cHHHHHHHHHHHHH-cCCCCCCCCcCCCEeccHHHHHHHHHHcCcHHHhcccCcHHHHHHHhCCCCC
Confidence 36777788866 67899999999977 8999998999999999999999999999999999999999999999999987
Q ss_pred cchhhHHHHHHHHHHhhhcHHHHHh
Q 000213 167 ISDCARHVLCQLYYKHLYDYEKYYN 191 (1849)
Q Consensus 167 ~~s~~~~~Lk~~Y~kyL~pYE~~~~ 191 (1849)
.++ +++.|+++|+|||+|||.|..
T Consensus 79 ~~s-a~~~Lr~~Y~k~L~~YE~~~~ 102 (121)
T 2rq5_A 79 AQD-RLAKLQEAYCQYLLSYDSLSP 102 (121)
T ss_dssp CSS-HHHHHHHHHHTTHHHHHHCCH
T ss_pred cCc-HHHHHHHHHHHHhHHHHCcCH
Confidence 655 456899999999999998743
No 14
>1c20_A DEAD ringer protein; DNA-binding domain, ARID, AT-rich interaction domain, DNA- binding protein; NMR {Drosophila melanogaster} SCOP: a.4.3.1 PDB: 1kqq_A
Probab=99.76 E-value=3.7e-19 Score=184.96 Aligned_cols=104 Identities=26% Similarity=0.403 Sum_probs=94.5
Q ss_pred cccchhhhhhhccCChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCC
Q 000213 85 TQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSN 164 (1849)
Q Consensus 85 ~Q~LneL~~~~r~~~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~ 164 (1849)
+|+||+|++. .++..|+.+|.+||+. +|+++..+|+|+|++||||+||.+|.++|||+.|++.++|.+|++.||++
T Consensus 11 iqrl~el~~~---~~~~~Fl~~L~~F~~~-rG~~l~~~P~i~gk~vDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~ 86 (128)
T 1c20_A 11 VRQLYEINDD---PKRKEFLDDLFSFMQK-RGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLP 86 (128)
T ss_dssp HHHHHHTCCC---HHHHHHHHHHHHHHTT-TSSCSSCCCEETTEECCHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCC
T ss_pred HHHHHccCCc---hHHHHHHHHHHHHHHH-cCCCCccceeECCEeecHHHHHHHHHHhcCHHHcCccCcHHHHHHHhCCC
Confidence 7999999885 2578999999999976 89999888899999999999999999999999999999999999999999
Q ss_pred CccchhhHHHHHHHHHHhhhcHHHHHhhh
Q 000213 165 RKISDCARHVLCQLYYKHLYDYEKYYNKL 193 (1849)
Q Consensus 165 ~~~~s~~~~~Lk~~Y~kyL~pYE~~~~~~ 193 (1849)
...++ +++.||++|+|||+|||.|.++.
T Consensus 87 ~~~~s-a~~~Lk~~Y~k~L~~yE~~~~~~ 114 (128)
T 1c20_A 87 SSITS-AAFTLRTQYMKYLYPYECEKKNL 114 (128)
T ss_dssp SSCCS-HHHHHHHHHHHHTHHHHHHHHCC
T ss_pred CCCCc-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 87665 45689999999999999999754
No 15
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=99.72 E-value=3.8e-18 Score=172.06 Aligned_cols=93 Identities=19% Similarity=0.489 Sum_probs=84.7
Q ss_pred ChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHH
Q 000213 99 DSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQL 178 (1849)
Q Consensus 99 ~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~ 178 (1849)
+++.|+.+|.+||+. +|+++..+|+|+|++||||+||.+|+++|||++|+++++|.+|++.||++...++ +++.|+++
T Consensus 3 e~~~Fl~~L~~F~~~-rg~~~~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s-~~~~Lk~~ 80 (107)
T 1ig6_A 3 DEQAFLVALYKYMKE-RKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTS-AATCTRRH 80 (107)
T ss_dssp HHHHHHHHHHHHHHT-TTCCGGGCCCSSSSSCCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTT-TTTTHHHH
T ss_pred hHHHHHHHHHHHHHH-cCCCCCcCceECCEeecHHHHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCCc-HHHHHHHH
Confidence 467899999999976 8999988889999999999999999999999999999999999999999886555 44589999
Q ss_pred HHHhhhcHHHHHhhh
Q 000213 179 YYKHLYDYEKYYNKL 193 (1849)
Q Consensus 179 Y~kyL~pYE~~~~~~ 193 (1849)
|++||+|||.|+++.
T Consensus 81 Y~k~L~~yE~~~~~~ 95 (107)
T 1ig6_A 81 YERLILPYERFIKGE 95 (107)
T ss_dssp HHHHTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999754
No 16
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=99.70 E-value=1.2e-17 Score=165.39 Aligned_cols=88 Identities=27% Similarity=0.357 Sum_probs=80.0
Q ss_pred hhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHH
Q 000213 100 SKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLY 179 (1849)
Q Consensus 100 ~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y 179 (1849)
++.|+.+|.+||+. +|++++ +|.|+|++||||+||++|+++|||++|+++++|.+|++.|+++... .+++.|+++|
T Consensus 8 ~~~F~~~L~~F~~~-~g~~l~-~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~--~~~~~Lk~~Y 83 (96)
T 2jxj_A 8 RLDFLDQLAKFWEL-QGSTLK-IPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGK--GTGSLLKSHY 83 (96)
T ss_dssp HHHHHHHHHHHHHH-HTCCCC-CCEETTEECCCHHHHHHHHHHHTTHHHHHHTTHHHHHHHHTCCSCS--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCCCC-CCcCCCEeccHHHHHHHHHHcCCHHHHccCCcHHHHHHHhCCCCcC--cHHHHHHHHH
Confidence 57899999999976 899995 5678999999999999999999999999999999999999998754 2456899999
Q ss_pred HHhhhcHHHHHh
Q 000213 180 YKHLYDYEKYYN 191 (1849)
Q Consensus 180 ~kyL~pYE~~~~ 191 (1849)
+|||+|||.|.+
T Consensus 84 ~k~L~~yE~~~~ 95 (96)
T 2jxj_A 84 ERILYPYELFQS 95 (96)
T ss_dssp TTTTHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999975
No 17
>1kkx_A Transcription regulatory protein ADR6; ARID, DNA-binding domain, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.4.3.1 PDB: 1kn5_A
Probab=99.69 E-value=2.2e-17 Score=169.73 Aligned_cols=87 Identities=20% Similarity=0.338 Sum_probs=81.3
Q ss_pred ChhhHHHHHHHHHHHhcCCcccccccccCeeechHHHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHH
Q 000213 99 DSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQL 178 (1849)
Q Consensus 99 ~~~~F~~~l~kFl~~~~G~~Lk~pp~I~gr~LDLy~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~ 178 (1849)
.++.|+.+|.+||+. +|++++.+|+|+|++||||+||++|.++|||++||++++|.+|++.|+++. ++.|+++
T Consensus 18 ~~~~Fl~~L~~F~~~-rG~pl~~~P~i~gk~lDL~~Ly~~V~~~GG~~~V~~~k~W~~Va~~lg~~~------~~~Lr~~ 90 (123)
T 1kkx_A 18 QYELFMKSLIENCKK-RNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQRLQISD------YQQLESI 90 (123)
T ss_dssp HHHHHHHHHHHHHHH-TTCSSSSCCCCSSSSCCTTHHHHHHTTTSCHHHHTTSHHHHHHHHHHTCCC------HHHHHHH
T ss_pred hHHHHHHHHHHHHHH-cCCCCCcCceECCEeecHHHHHHHHHHhcCHHhccccccHHHHHHHHCCCh------HHHHHHH
Confidence 478899999999977 899998888999999999999999999999999999999999999999986 4589999
Q ss_pred HHHhhhcHHHHHhh
Q 000213 179 YYKHLYDYEKYYNK 192 (1849)
Q Consensus 179 Y~kyL~pYE~~~~~ 192 (1849)
|+|||+|||.|+++
T Consensus 91 Y~k~L~~yE~~~~~ 104 (123)
T 1kkx_A 91 YFRILLPYERHMIS 104 (123)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999864
No 18
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=2e-14 Score=140.69 Aligned_cols=70 Identities=34% Similarity=0.974 Sum_probs=63.4
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccC----CCCCCCccCC-cccchHHHH
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS----DKDSFGFVPG-KRYTVESFR 315 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~----~~~~fGF~~g-k~yTLeeF~ 315 (1849)
+..|.+|+.+.+++.||+||.|+++||++|+.|||..+|.|+|+|+.|... +.+.|||+++ +.|||.+|.
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~~~~~~~~~~Gf~~~~~~y~l~~~~ 90 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLSGPS 90 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHHHHSCCSSCCSCCCCCCCCCCSCCS
T ss_pred CCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCccccCCccccChhhcCCceeecccC
Confidence 557999999988889999999999999999999999999999999999763 5678999999 789998763
No 19
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.42 E-value=1.3e-14 Score=137.01 Aligned_cols=63 Identities=33% Similarity=0.827 Sum_probs=53.1
Q ss_pred CCCceEEEeccCCC-CCCceeecCCCceEEcccccccCCC----CceecCCCcCCCCCCCCCCcCCCCCC
Q 000213 1705 ARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACKPQAEESSTPQNVDGGRT 1769 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~~----~~~~C~~C~~~~~~~~~~~~~~~~~~ 1769 (1849)
+.+.+||+|++|++ +++||+||.|++|||+.|||+++.+ +.|+|+.|....+++++ +++++||
T Consensus 7 ~~~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~~~~--k~k~~~~ 74 (75)
T 3kqi_A 7 ATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTL--KKKRTWH 74 (75)
T ss_dssp CCCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCCCCB--CSCCCCC
T ss_pred CCCeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCCCeE--eeccccC
Confidence 45679999999987 5799999999999999999999753 68999999998887766 4445555
No 20
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.38 E-value=1.3e-13 Score=131.57 Aligned_cols=57 Identities=35% Similarity=0.859 Sum_probs=50.3
Q ss_pred cCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCC
Q 000213 1704 RARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESST 1760 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~----~~~~~C~~C~~~~~~~~~ 1760 (1849)
.+.+.+||+|++|++ +++||+||.|++|||+.|||++.. ++.|+|+.|....+++++
T Consensus 8 ~~~~~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~~ 69 (79)
T 1wep_A 8 MALVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGPSIM 69 (79)
T ss_dssp CCCCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCSCBC
T ss_pred ccCCccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCCCce
Confidence 356789999999997 689999999999999999999864 579999999998887666
No 21
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.32 E-value=2.1e-13 Score=125.82 Aligned_cols=55 Identities=31% Similarity=0.986 Sum_probs=46.6
Q ss_pred hhhccCCCceEEEeccCCCCCCceeecCCCceEEcccccccCC--CCceecCCCcCC
Q 000213 1700 LKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--PEIYICAACKPQ 1754 (1849)
Q Consensus 1700 ~~~~~~~~~~yC~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~~~--~~~~~C~~C~~~ 1754 (1849)
-+...+.+.+||+|++++++++||+||.|++|||+.|||++.. ++.|+|+.|...
T Consensus 11 ~~~~~~~~~~~CiC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 11 RENLYFQGLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp ---CTTTTCCCSTTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred cccCCCCCceEeECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 3445567789999999999889999999999999999999974 579999999763
No 22
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.29 E-value=3.7e-13 Score=117.99 Aligned_cols=47 Identities=34% Similarity=1.144 Sum_probs=42.8
Q ss_pred CceEEEeccCCCCCCceeecCCCceEEcccccccCC--CCceecCCCcC
Q 000213 1707 SMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--PEIYICAACKP 1753 (1849)
Q Consensus 1707 ~~~yC~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~~~--~~~~~C~~C~~ 1753 (1849)
+.+||+|++++++++||+||.|++|||+.|||++.. +++|+||.|+.
T Consensus 3 d~~~C~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TCBCSTTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred cCeEEEeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 468999999999889999999999999999999974 58999999975
No 23
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.26 E-value=1.6e-13 Score=129.88 Aligned_cols=54 Identities=43% Similarity=0.982 Sum_probs=47.7
Q ss_pred cCCCceEEEeccCCCCCCceeecCCCceEEcccccccCC--------CCceecCCCcCCCCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA--------PEIYICAACKPQAEE 1757 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~~~--------~~~~~C~~C~~~~~~ 1757 (1849)
.|++.+||+|++++++++||+||.|++|||+.|||++.. +++|+|+.|...+++
T Consensus 12 ~d~~~~~C~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 12 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCTTCCCSTTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred cCCCCCEEECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 455679999999999889999999999999999999864 479999999987764
No 24
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.25 E-value=7.5e-13 Score=123.98 Aligned_cols=55 Identities=27% Similarity=0.661 Sum_probs=47.4
Q ss_pred cCCCceEEEeccCCCC-CCceeecCCCceEEcccccccCC---CCceecCCCcCCCCCC
Q 000213 1704 RARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLSA---PEIYICAACKPQAEES 1758 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~-~~mi~Cd~C~~W~H~~Cvg~~~~---~~~~~C~~C~~~~~~~ 1758 (1849)
.++..+||+|++++++ .+||+||.|++|||+.|||++.. +++|+|+.|....+++
T Consensus 12 ~~~~~~~C~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ps 70 (72)
T 1wee_A 12 VDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGPS 70 (72)
T ss_dssp SCSSEECCTTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSSC
T ss_pred CCCcceEeeCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCCCC
Confidence 4677899999999865 58999999999999999999963 5799999999876644
No 25
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.22 E-value=2.1e-12 Score=118.19 Aligned_cols=52 Identities=31% Similarity=0.776 Sum_probs=45.7
Q ss_pred CCCceEE-EeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCC
Q 000213 1705 ARSMLYC-ICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAE 1756 (1849)
Q Consensus 1705 ~~~~~yC-~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~----~~~~~C~~C~~~~~ 1756 (1849)
+++..|| +|++|++ +++||+||.|++|||+.|||++.. ++.|+|+.|+.++.
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 4567899 9999997 578999999999999999999975 47999999998655
No 26
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.19 E-value=2.2e-12 Score=122.63 Aligned_cols=53 Identities=28% Similarity=0.823 Sum_probs=46.1
Q ss_pred cCCCceEEEeccCCCCCCceeec--CCCceEEcccccccCCC--------CceecCCCcCCCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSAP--------EIYICAACKPQAE 1756 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd--~C~~W~H~~Cvg~~~~~--------~~~~C~~C~~~~~ 1756 (1849)
.++..+||+|++++++++||+|| .|+.|||+.|||++..+ ++|+|+.|+....
T Consensus 12 ~~~~~~~CiC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 12 QPEIKVRCVCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp SCCCCCCCSSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCCCCEEeECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccC
Confidence 34578999999998888999999 99999999999998753 6999999987544
No 27
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.18 E-value=2.3e-12 Score=115.70 Aligned_cols=50 Identities=32% Similarity=0.900 Sum_probs=41.8
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~W~H~~Cvg~~~~~-~~~~C~~C~~~ 1754 (1849)
+.++.+||+|+++++ ++||+||. |. +|||+.|||++..+ .+|+||.|+.+
T Consensus 5 d~~e~~yC~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYCLCHQVSY-GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEETTTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHCC
T ss_pred CCCCCcEEECCCCCC-CCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccCc
Confidence 345679999999976 58999999 76 89999999999877 59999999764
No 28
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.18 E-value=4.9e-12 Score=117.71 Aligned_cols=52 Identities=31% Similarity=0.876 Sum_probs=44.6
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCCCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~W~H~~Cvg~~~~~-~~~~C~~C~~~~~ 1756 (1849)
++++.+||+|+++++ ++||+||. |. +|||+.|||++..+ .+|+||.|.....
T Consensus 12 d~~~~~~C~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 12 DPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp CTTSCCCSTTCCCSC-SSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCSS
T ss_pred CCCCCCEEECCCCCC-CCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcccc
Confidence 456679999999976 58999999 77 89999999999876 5999999987544
No 29
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.18 E-value=2.6e-12 Score=160.37 Aligned_cols=82 Identities=26% Similarity=0.608 Sum_probs=68.8
Q ss_pred ccCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCCC----CceecCCCcCCCCCCCCCCcCCCCCCCCCCCCCC
Q 000213 1703 LRARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSAP----EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPK 1777 (1849)
Q Consensus 1703 ~~~~~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~~----~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~p~ 1777 (1849)
..+.+.+||+|++|++ +++||+||.|++|||+.|||++..+ ++|+|+.|...++++.. ++++++++.++..++
T Consensus 32 ~~~~~~~yC~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~~--k~~~~~~r~Dy~~~~ 109 (488)
T 3kv5_D 32 PPPPPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHGSSLM--KKRRNWHRHDYTEID 109 (488)
T ss_dssp CCCCCCEETTTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHHCSCEE--CCCCCSSSSSTTSCC
T ss_pred cCCCCCeEEeCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCcCcchh--ccccccccccccccc
Confidence 4567789999999987 6899999999999999999999753 68999999999887765 556668888999988
Q ss_pred CCCCCCChh
Q 000213 1778 TPSPKHTNS 1786 (1849)
Q Consensus 1778 ~~~~~~~~~ 1786 (1849)
..+++....
T Consensus 110 ~gskpvq~g 118 (488)
T 3kv5_D 110 DGSKPVQAG 118 (488)
T ss_dssp SSCSCCCTT
T ss_pred cCcCccccc
Confidence 877766543
No 30
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.16 E-value=3.5e-12 Score=115.56 Aligned_cols=49 Identities=31% Similarity=0.817 Sum_probs=41.2
Q ss_pred CCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCC-CceecCCCcCC
Q 000213 1705 ARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~~~~mi~Cd~C~---~W~H~~Cvg~~~~~-~~~~C~~C~~~ 1754 (1849)
.++.+||+|++++++ +||+||.|+ +|||+.|||++..+ .+|+||.|+..
T Consensus 8 ~~e~~yC~C~~~~~g-~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 8 PNEPTYCLCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp --CCEETTTTEECCS-EEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred CCCCcEEECCCCCCC-CeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 356799999999764 899999954 99999999999876 49999999864
No 31
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.16 E-value=3e-12 Score=118.50 Aligned_cols=50 Identities=28% Similarity=0.863 Sum_probs=42.9
Q ss_pred CCCceEEEeccCCCCCCceeec--CCCceEEcccccccCCC-------CceecCCCcCC
Q 000213 1705 ARSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSAP-------EIYICAACKPQ 1754 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~~~~mi~Cd--~C~~W~H~~Cvg~~~~~-------~~~~C~~C~~~ 1754 (1849)
.++.+||+|+.++++++||+|| .|++|||+.|||++..+ ++|+|+.|+..
T Consensus 7 ~e~~v~C~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 7 PEAKVRCICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp SSCEECCTTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCCCEEeECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 3457999999998889999999 49999999999998642 48999999863
No 32
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.15 E-value=9.7e-12 Score=108.60 Aligned_cols=49 Identities=39% Similarity=1.062 Sum_probs=45.9
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccC
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1849)
.|.+|+.+++++.||+||+|+++||++|++|||..+|+|+|+|+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 5899999888889999999999999999999999999999999999753
No 33
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.14 E-value=1e-11 Score=120.44 Aligned_cols=53 Identities=30% Similarity=0.871 Sum_probs=45.3
Q ss_pred ccCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCCCC
Q 000213 1703 LRARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1703 ~~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~W~H~~Cvg~~~~~-~~~~C~~C~~~~~ 1756 (1849)
.++++.+||+|+++++ ++||+||. |. +|||+.|||++..+ .+|+||.|+....
T Consensus 31 ~d~~e~~yCiC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 31 VDPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCSCCCBCSTTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCCS
T ss_pred cCCCCCcEEECCCCCC-CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcCC
Confidence 4456789999999987 58999999 66 99999999999876 4999999987554
No 34
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=2.3e-12 Score=119.54 Aligned_cols=51 Identities=35% Similarity=0.815 Sum_probs=43.9
Q ss_pred CCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCC-CceecCCCcCCCC
Q 000213 1705 ARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~~~~mi~Cd~C~---~W~H~~Cvg~~~~~-~~~~C~~C~~~~~ 1756 (1849)
.++.+||+|++++++ +||+||.|+ +|||+.|||++..+ .+|+||.|.....
T Consensus 3 ~~~~~yC~C~~~~~g-~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~~ 57 (70)
T 1x4i_A 3 SGSSGYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAMK 57 (70)
T ss_dssp CSCCCCSTTSCCCCS-SEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCCeEEEcCCCCCC-CEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcccc
Confidence 456799999999765 999999985 99999999999875 5999999987543
No 35
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.11 E-value=3.5e-12 Score=156.94 Aligned_cols=67 Identities=31% Similarity=0.759 Sum_probs=50.2
Q ss_pred CCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCCCCcCCCCCCCCCC
Q 000213 1705 ARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESSTPQNVDGGRTNAEF 1773 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~----~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~ 1773 (1849)
+..++||+|++|++ +++||+||.|++|||+.|||+++. +++|+||.|....+++.+ ++++.|++++.
T Consensus 2 ~~~~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~~~~--k~~~~~~r~~~ 73 (447)
T 3kv4_A 2 ASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPSIM--KKRRGSSKGHD 73 (447)
T ss_dssp -CCCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCCCEE--CC---------
T ss_pred CCCCeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCCchh--ccccccccccc
Confidence 35679999999987 689999999999999999999974 369999999999997766 44455666554
No 36
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.10 E-value=1e-11 Score=120.13 Aligned_cols=50 Identities=36% Similarity=0.851 Sum_probs=42.2
Q ss_pred ccCCCceEEEeccCCCCCCceeecCCC---ceEEcccccccCCCC-ceecCC-CcC
Q 000213 1703 LRARSMLYCICRKPYDEKAMIACYQCD---EWYHIDCVKLLSAPE-IYICAA-CKP 1753 (1849)
Q Consensus 1703 ~~~~~~~yC~C~~~~~~~~mi~Cd~C~---~W~H~~Cvg~~~~~~-~~~C~~-C~~ 1753 (1849)
..+++.+||+|++++++ +||+||.|+ +|||+.||||+..+. +||||. |..
T Consensus 21 ~~~~~~~yCiC~~~~~g-~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 21 NNNQEEVYCFCRNVSYG-PMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp ---CCSCCSTTTCCCSS-SEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCCCCcEEEeCCCCCC-CEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 45567899999998775 799999977 999999999998774 999999 874
No 37
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.09 E-value=1.1e-11 Score=111.78 Aligned_cols=50 Identities=32% Similarity=0.909 Sum_probs=41.1
Q ss_pred cCCCceEEEeccCCCCCCceeecC--CC-ceEEcccccccCCC-CceecCCCcCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACYQ--CD-EWYHIDCVKLLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd~--C~-~W~H~~Cvg~~~~~-~~~~C~~C~~~ 1754 (1849)
++++.+||+|+++++ ++||+||. |. +|||+.|||++..| .+|+||.|..+
T Consensus 6 d~~e~~~C~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 6 DPNEPTYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ---CCEETTTTEECC-SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC-
T ss_pred CCCCCCEEECCCcCC-CCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccCc
Confidence 345679999999976 58999999 55 99999999999876 59999999763
No 38
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.04 E-value=8e-11 Score=109.37 Aligned_cols=48 Identities=44% Similarity=1.159 Sum_probs=45.3
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCC-CCccccccc
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1849)
.|.+|+++++++.||+||+|+++||++||+|||+.+|+| +|+|+.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 578999988889999999999999999999999999999 999999975
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=8.6e-11 Score=111.01 Aligned_cols=50 Identities=42% Similarity=1.077 Sum_probs=46.6
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCC-CCccccccc
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1849)
+..|.+|+..++++.||+||.|+++||++||+|||..+|.| +|+|+.|..
T Consensus 26 ~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 34799999988889999999999999999999999999999 999999974
No 40
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.03 E-value=8.8e-11 Score=112.85 Aligned_cols=51 Identities=27% Similarity=0.733 Sum_probs=45.7
Q ss_pred hhhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
..++.|.+|+.++ .+|+||.|+++||++|+.|||+.+|.|+|+|+.|...+
T Consensus 23 ~n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 23 DSATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 4467899999874 59999999999999999999999999999999998654
No 41
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.03 E-value=1.1e-10 Score=105.62 Aligned_cols=52 Identities=38% Similarity=1.037 Sum_probs=45.6
Q ss_pred chhhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
+..+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|.|+|+|+.|....
T Consensus 6 d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 6 DHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp CSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred cCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 3446789999875 469999999999999999999999999999999998643
No 42
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.02 E-value=4.3e-11 Score=104.88 Aligned_cols=43 Identities=35% Similarity=0.861 Sum_probs=37.9
Q ss_pred EEEeccCCC-CCCceeec-CCCceEEcccccccCC---CCceecCCCc
Q 000213 1710 YCICRKPYD-EKAMIACY-QCDEWYHIDCVKLLSA---PEIYICAACK 1752 (1849)
Q Consensus 1710 yC~C~~~~~-~~~mi~Cd-~C~~W~H~~Cvg~~~~---~~~~~C~~C~ 1752 (1849)
.|+|++|++ +++||+|| .|++|||+.|||++.. +++|+|+.|+
T Consensus 5 cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 589999997 57899999 8999999999999975 3799999995
No 43
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.01 E-value=1.2e-10 Score=109.99 Aligned_cols=48 Identities=44% Similarity=1.168 Sum_probs=45.3
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCC-Cccccccc
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGN-WYCLECLN 295 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gd-W~C~~C~~ 295 (1849)
.|++|+++.+++.||+||.|+++||++||+|||..+|.|+ |+|+.|.+
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 6999999999999999999999999999999999999999 99999975
No 44
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.99 E-value=1.2e-10 Score=106.68 Aligned_cols=48 Identities=25% Similarity=0.588 Sum_probs=43.0
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccC
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1849)
+..|.+|+.+ +.||+||.|+++||++|++|||..+|.|+|+|+.|...
T Consensus 12 ~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4569999865 45999999999999999999999999999999999753
No 45
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.97 E-value=1.3e-10 Score=112.90 Aligned_cols=52 Identities=27% Similarity=0.752 Sum_probs=46.2
Q ss_pred hhhhhhcccCCCC--CCceecccccCCccccccCCCCCCC----CCCCCCcccccccC
Q 000213 245 LDQICEQCKSGLH--GEVMLLCDRCNKGWHVYCLSPPLKH----VPRGNWYCLECLNS 296 (1849)
Q Consensus 245 ~~~~C~~C~~~~~--~~~lLlCD~Cd~~yH~~CL~PPL~~----vP~gdW~C~~C~~~ 296 (1849)
.+..|.+|+++.. ++.||+||.|+++||++|+.|||.. +|.|+|+|+.|+..
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 4568999998865 4689999999999999999999985 99999999999763
No 46
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.96 E-value=1.5e-10 Score=106.42 Aligned_cols=50 Identities=38% Similarity=1.103 Sum_probs=45.1
Q ss_pred hhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
.+..|.+|+.+ ..||+||.|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 7 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 7 NEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTC
T ss_pred CCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcc
Confidence 35689999976 369999999999999999999999999999999998754
No 47
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=2.4e-10 Score=101.75 Aligned_cols=48 Identities=38% Similarity=1.130 Sum_probs=43.5
Q ss_pred hhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
.+..|.+|+.+ ..||+||.|+++||++|+.|||+.+|.|+|+|+.|..
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 35679999976 3699999999999999999999999999999999964
No 48
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.93 E-value=3.5e-10 Score=112.11 Aligned_cols=51 Identities=35% Similarity=0.925 Sum_probs=44.4
Q ss_pred cCCCceEEEeccCCCCCCceeecCCCceEEcccccccC--CCCceecCCCcCC
Q 000213 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS--APEIYICAACKPQ 1754 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~~--~~~~~~C~~C~~~ 1754 (1849)
.+.+.++|||+.++++++||+||.|+.|||..|||++. .|+.|+||.|++.
T Consensus 24 ~~~d~vrCiC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 24 YGTDVTRCICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCCCBCCCTTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCCCCEEeECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 34557899999999989999999999999999999975 3579999999763
No 49
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.93 E-value=1.9e-10 Score=108.51 Aligned_cols=52 Identities=37% Similarity=0.951 Sum_probs=44.8
Q ss_pred cCCCceEE-EeccCCCCCCceeecCCCceEEcccccccCCC---CceecCCCcCCC
Q 000213 1704 RARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAACKPQA 1755 (1849)
Q Consensus 1704 ~~~~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~~~~---~~~~C~~C~~~~ 1755 (1849)
.+.+..|| +|++++++++||+||.|++|||+.|||++..+ ..|+||.|....
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 34566799 99999988899999999999999999998753 599999998743
No 50
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.91 E-value=2.4e-10 Score=140.91 Aligned_cols=79 Identities=19% Similarity=0.378 Sum_probs=58.9
Q ss_pred cCCCceEEEeccC----CCCCCceeecCCCceEEcccccccCC----CCceecCCCcCCCCCCCCCCcCCCCCCCCCCCC
Q 000213 1704 RARSMLYCICRKP----YDEKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAEESSTPQNVDGGRTNAEFLE 1775 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~----~~~~~mi~Cd~C~~W~H~~Cvg~~~~----~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~ 1775 (1849)
++.+.+++.+.+. .++++||+||.|++|||+.|||+++. +++|+||.|...++++++ +.+..||++++.+
T Consensus 36 ~~~~~~~~s~kk~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~gps~~--k~~~~~~r~~~~~ 113 (528)
T 3pur_A 36 KEKEKPLMSKKKSHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTGHSIR--YKVVAPHRYRWYS 113 (528)
T ss_dssp ------CCSCCCTTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHCSCEE--CCCCCTTSSSTTC
T ss_pred hhhhhccccccccccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCCCcce--eeccCcccccccc
Confidence 4455677777543 34689999999999999999999974 369999999999998887 5556789998888
Q ss_pred CCCCCCCCC
Q 000213 1776 PKTPSPKHT 1784 (1849)
Q Consensus 1776 p~~~~~~~~ 1784 (1849)
+.+..++..
T Consensus 114 ~~~~~~~~~ 122 (528)
T 3pur_A 114 PNEKHLGIE 122 (528)
T ss_dssp GGGTTSCCC
T ss_pred cccccCccc
Confidence 766555544
No 51
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.91 E-value=3.2e-10 Score=102.32 Aligned_cols=47 Identities=38% Similarity=1.167 Sum_probs=43.2
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|.|+|+|+.|..
T Consensus 5 ~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 5 EDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 5679999986 3699999999999999999999999999999999965
No 52
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.91 E-value=2.9e-10 Score=102.88 Aligned_cols=49 Identities=35% Similarity=1.065 Sum_probs=44.2
Q ss_pred hhhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
..+..|.+|+.+ +.||+||.|+++||++|+.|||+.+|.|+|+|+.|..
T Consensus 9 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 346689999975 4699999999999999999999999999999999975
No 53
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.90 E-value=2.5e-10 Score=105.10 Aligned_cols=52 Identities=25% Similarity=0.883 Sum_probs=45.8
Q ss_pred hhhhhcccCCC--CCCceecccccCCccccccCCCCCCC--C-CCCCCcccccccCC
Q 000213 246 DQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKH--V-PRGNWYCLECLNSD 297 (1849)
Q Consensus 246 ~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~--v-P~gdW~C~~C~~~~ 297 (1849)
+..|.+|+.+. +++.||+||+|+.+||++|+.|||.. + |.|+|+|+.|....
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 56899999884 45789999999999999999999987 4 89999999998754
No 54
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.90 E-value=1.4e-09 Score=136.00 Aligned_cols=138 Identities=14% Similarity=0.078 Sum_probs=98.5
Q ss_pred ceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhhhhhC
Q 000213 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN 497 (1849)
Q Consensus 418 P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~ 497 (1849)
-|+|+|+.+|.+.+|++-....+.|.+..| .|.||-+||+.... . +...... ..++. ..+ +...
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~-~-~y~~~~~----~~~~~----~~~-----~~~~ 331 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL-A-RYESWSS----SVTQS----EVF-----FGDK 331 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHHT----CSSGG----GSC-----GGGS
T ss_pred eEEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCccccc-c-ccccccc----CCccc----hhh-----hccc
Confidence 489999999999999999888888888888 99999999986541 1 1111111 00100 011 1122
Q ss_pred CCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHHHHHHhcCCCC--CC-hHHHHHHHhh
Q 000213 498 GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAV--LS-HEELLCVVAK 571 (1849)
Q Consensus 498 GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~v--fs-~~~Ll~~~A~ 571 (1849)
....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++.-..+.+.=+..+...- || .++|+|-+|+
T Consensus 332 ~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~~~ 408 (488)
T 3kv5_D 332 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAK 408 (488)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHH
T ss_pred ccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999888776665554444443333 33 3667776664
No 55
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.86 E-value=1.6e-10 Score=105.62 Aligned_cols=48 Identities=21% Similarity=0.663 Sum_probs=39.4
Q ss_pred CCceEEEeccCCC-CCCceeec-CCCceEEcccccccCC--------C-CceecCCCcC
Q 000213 1706 RSMLYCICRKPYD-EKAMIACY-QCDEWYHIDCVKLLSA--------P-EIYICAACKP 1753 (1849)
Q Consensus 1706 ~~~~yC~C~~~~~-~~~mi~Cd-~C~~W~H~~Cvg~~~~--------~-~~~~C~~C~~ 1753 (1849)
.....++|++|++ +.+||+|| .|++|||+.||||++. + ..|+||.|.+
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCccC
Confidence 3445679999987 47899999 9999999999999973 3 3999999963
No 56
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.86 E-value=7.4e-10 Score=123.78 Aligned_cols=50 Identities=42% Similarity=1.077 Sum_probs=42.6
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCC-CCccccccc
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g-dW~C~~C~~ 295 (1849)
+..|.+|+.+.+++.||+||+|+++||++||+|||..+|.| +|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 44799999998889999999999999999999999999999 999999975
No 57
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.83 E-value=6.4e-10 Score=103.46 Aligned_cols=50 Identities=40% Similarity=0.994 Sum_probs=44.4
Q ss_pred hhhhhhcccCCC--CCCceecccccCCccccccCCCCCCCCCCCCCcccccccC
Q 000213 245 LDQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1849)
Q Consensus 245 ~~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1849)
.+..|.+|+.++ +++.||+||+|+.+||++|+.||. +|+|+|||+.|...
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 66 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCc
Confidence 356899999885 678999999999999999999984 99999999999763
No 58
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.80 E-value=1.5e-09 Score=110.66 Aligned_cols=48 Identities=38% Similarity=1.127 Sum_probs=45.2
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
.|.+|+...+++.||+||.|+++||++||+|||..+|.|+|+|+.|..
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccc
Confidence 588999988888999999999999999999999999999999999965
No 59
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.78 E-value=7.9e-10 Score=107.26 Aligned_cols=51 Identities=39% Similarity=0.972 Sum_probs=45.3
Q ss_pred hhhhhhcccCCC--CCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 245 LDQICEQCKSGL--HGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 245 ~~~~C~~C~~~~--~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
.+..|.+|+.+. +++.||+||+|+.+||++|+.||+ +|.|+|||+.|....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCcc
Confidence 356899999886 667899999999999999999985 999999999998754
No 60
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.77 E-value=5e-10 Score=122.62 Aligned_cols=53 Identities=38% Similarity=1.012 Sum_probs=44.1
Q ss_pred cCCCceEEEeccCCC-CCCceeecCCCceEEcccccccCC----CCceecCCCcCCCC
Q 000213 1704 RARSMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLSA----PEIYICAACKPQAE 1756 (1849)
Q Consensus 1704 ~~~~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~~----~~~~~C~~C~~~~~ 1756 (1849)
++++.+||+|++|++ +++||+||.|++|||+.|||++.. ++.|+||.|+....
T Consensus 4 ~~~~~~~C~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~~ 61 (174)
T 2ri7_A 4 GSDTKLYCICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTED 61 (174)
T ss_dssp ---CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHHH
T ss_pred CCCCCcEeeCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchhc
Confidence 456679999999987 578999999999999999999853 57999999997654
No 61
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.76 E-value=2.1e-09 Score=120.88 Aligned_cols=52 Identities=33% Similarity=0.848 Sum_probs=46.1
Q ss_pred chhhhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
+..++.|.+|+.++ .+|+||+|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 4 d~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34567899999764 49999999999999999999999999999999998754
No 62
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.76 E-value=7e-09 Score=127.81 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=102.4
Q ss_pred Ccccc----eeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhcccc
Q 000213 414 GVMVP----WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTML 489 (1849)
Q Consensus 414 Gv~~P----~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~ 489 (1849)
+...| |+|+|+.+|.+.+|++-....+.|.+..| .|.||-+||.... +. ..+...... .+. ..++
T Consensus 225 ~~~rP~v~r~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~s~--~~~------~~~~ 293 (447)
T 3kv4_A 225 VFERPNVQKYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSSS--NQN------EMFF 293 (447)
T ss_dssp TSCCCCCSCEEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHTCS--SGG------GSCG
T ss_pred hccCCCceeEEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCccc-cc-chhhcccCc--chh------hhhc
Confidence 45667 89999999999999999988888888888 9999999999643 21 111111110 000 1111
Q ss_pred ChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHHHHHHhcCCC--CCCh-HHHH
Q 000213 490 NPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAA--VLSH-EELL 566 (1849)
Q Consensus 490 ~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~--vfs~-~~Ll 566 (1849)
+ ......++++|+|||.+++-.|-+|+++|..-+++..-||.+..-++.-....+.=+..+... -||+ +.++
T Consensus 294 -~----~~~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~ 368 (447)
T 3kv4_A 294 -G----DQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETIC 368 (447)
T ss_dssp -G----GGSSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHH
T ss_pred -c----ccccceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHH
Confidence 1 123467899999999999999999999999999999999999998887766554444443322 2544 6677
Q ss_pred HHHhh
Q 000213 567 CVVAK 571 (1849)
Q Consensus 567 ~~~A~ 571 (1849)
|-+|+
T Consensus 369 w~~~~ 373 (447)
T 3kv4_A 369 WYVGK 373 (447)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77775
No 63
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.74 E-value=1.2e-09 Score=109.57 Aligned_cols=47 Identities=26% Similarity=0.788 Sum_probs=39.8
Q ss_pred EEEeccCCCC-CCceeec-CCCceEEcccccccC---------CCCceecCCCcCCCC
Q 000213 1710 YCICRKPYDE-KAMIACY-QCDEWYHIDCVKLLS---------APEIYICAACKPQAE 1756 (1849)
Q Consensus 1710 yC~C~~~~~~-~~mi~Cd-~C~~W~H~~Cvg~~~---------~~~~~~C~~C~~~~~ 1756 (1849)
..+|++||++ +.||+|| .|++|||+.||||++ +..+|+||.|.....
T Consensus 6 C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 6 CGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 4489999864 6899998 999999999999996 226999999998655
No 64
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.72 E-value=4.2e-09 Score=116.34 Aligned_cols=49 Identities=33% Similarity=0.914 Sum_probs=44.3
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
++.|.+|+.++ .+|+||+|+++||++|+.|||..+|.|+|+|+.|....
T Consensus 4 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 4 EDWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 56799999763 49999999999999999999999999999999998754
No 65
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.70 E-value=5.6e-09 Score=106.00 Aligned_cols=50 Identities=40% Similarity=1.038 Sum_probs=46.4
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
.|.+|+.+.+++.||+||.|+++||++|++|||+.+|.|+|+|+.|....
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 58899998888899999999999999999999999999999999998643
No 66
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.69 E-value=6.7e-09 Score=105.54 Aligned_cols=48 Identities=38% Similarity=1.101 Sum_probs=43.4
Q ss_pred hhhcccCC-CCCCceecccccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 248 ICEQCKSG-LHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 248 ~C~~C~~~-~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
.|.+|+.+ .+++.+|+||.|+++||++||+|||..+|+|+|+|+.|..
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 58888874 5567899999999999999999999999999999999964
No 67
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.65 E-value=9.4e-09 Score=113.83 Aligned_cols=49 Identities=29% Similarity=0.758 Sum_probs=44.2
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
++.|.+|+.++ .+|+||+|+++||++|+.|||+.+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 45799999774 49999999999999999999999999999999998754
No 68
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.64 E-value=1.2e-07 Score=117.20 Aligned_cols=136 Identities=16% Similarity=0.047 Sum_probs=94.8
Q ss_pred ceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHH--HHHHHHHhhCCCcccCChhhhhhhccccChhhhh
Q 000213 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAG--AFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1849)
Q Consensus 418 P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~--kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~ 495 (1849)
-|+++|+.+|.+.+|++-....+.+++..| -|+||-+||.... .++.... .++ ...++. +.+
T Consensus 298 rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~nl~~y~~w~~--s~~-----------~~~wfg-d~l- 361 (528)
T 3pur_A 298 QFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQNFAAYQAHET--SPD-----------TTTWFG-DIA- 361 (528)
T ss_dssp SEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHH--SSC-----------CSCCGG-GGT-
T ss_pred EEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccchhhhhhhcc--CCc-----------hhhhhc-ccc-
Confidence 589999999999999998888777777777 9999999998643 2222211 110 111221 111
Q ss_pred hCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhH--HHHH--HhcCCC--CCCh-HHHHHH
Q 000213 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGA--DLYQ--QYHKAA--VLSH-EELLCV 568 (1849)
Q Consensus 496 ~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~--~~y~--~~~~~~--vfs~-~~Ll~~ 568 (1849)
...+++++|.|||.+++-+|-+|+++|.--+++..-||.+..=++.....+ +.+. ..+-.. .||+ +.++|-
T Consensus 362 --~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~iE~~~~k~~~~~~kf~fp~F~~v~W~ 439 (528)
T 3pur_A 362 --NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFELLHWM 439 (528)
T ss_dssp --TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHHCCCTTCCCCTTHHHHHHH
T ss_pred --cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHHHHhhhhccCCCccccCcCHHHHHHH
Confidence 135678999999999999999999999999999999999988777655433 3331 222222 4654 666776
Q ss_pred Hhh
Q 000213 569 VAK 571 (1849)
Q Consensus 569 ~A~ 571 (1849)
.++
T Consensus 440 y~~ 442 (528)
T 3pur_A 440 YMR 442 (528)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 69
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.63 E-value=5.2e-09 Score=98.73 Aligned_cols=59 Identities=25% Similarity=0.548 Sum_probs=50.0
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccccccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVS 1507 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~~~ 1507 (1849)
+..+|+|..++.++..||+|+.|++|||++||+++...+.....|+||.|....+.+.+
T Consensus 9 ~~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~~~~ 67 (75)
T 3kqi_A 9 VPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTL 67 (75)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCCCCB
T ss_pred CeeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCCCeE
Confidence 44679999877778899999999999999999988777777889999999877666544
No 70
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.63 E-value=5.1e-09 Score=114.69 Aligned_cols=49 Identities=35% Similarity=0.955 Sum_probs=41.3
Q ss_pred eEE-EeccCCCCC----CceeecCCCceEEcccccccCC--------C--CceecCCCcCCCCC
Q 000213 1709 LYC-ICRKPYDEK----AMIACYQCDEWYHIDCVKLLSA--------P--EIYICAACKPQAEE 1757 (1849)
Q Consensus 1709 ~yC-~C~~~~~~~----~mi~Cd~C~~W~H~~Cvg~~~~--------~--~~~~C~~C~~~~~~ 1757 (1849)
.|| +|+++|+++ +||+||.|++|||+.|||++.+ | ..|+||.|+...+.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 478 799999853 4999999999999999999862 2 28999999987763
No 71
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.62 E-value=1.7e-08 Score=96.17 Aligned_cols=67 Identities=19% Similarity=0.471 Sum_probs=53.1
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccccccccccCCCCcccCCCCC
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRS 1521 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~~~~~~~~~~~~~~~~p 1521 (1849)
.+..+|+|...+..+..||+|+.|.+|||..||+++.........|+||.|....+.++ ...+.|||
T Consensus 10 ~~~~~C~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~~~-------~K~~~~~~ 76 (79)
T 1wep_A 10 LVPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGPSI-------MKNWHSGP 76 (79)
T ss_dssp CCCCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCSCB-------CCCCCCSC
T ss_pred CCccEEEcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCCCc-------eeeecccc
Confidence 45578998877666789999999999999999998877666678999999977654433 34466666
No 72
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.60 E-value=9.7e-09 Score=96.87 Aligned_cols=51 Identities=27% Similarity=0.641 Sum_probs=47.0
Q ss_pred hhhhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccC
Q 000213 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296 (1849)
Q Consensus 246 ~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~ 296 (1849)
+..|.+|++..+++.|++||.|+.+||++|+.+++..+|.|+|+|+.|...
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp EECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 457999999988889999999999999999999999999999999999753
No 73
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.56 E-value=4.6e-08 Score=99.27 Aligned_cols=49 Identities=29% Similarity=0.674 Sum_probs=38.8
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C 1498 (1849)
....|..|........|+.|+.|...||..|+++..... ....|.||.|
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~-~~~~W~C~~C 54 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPL-KRAGWQCPEC 54 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTT-TSTTCCCTTT
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccc-cccCccCCcC
Confidence 446799996665556789999999999999999664322 3468999999
No 74
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.55 E-value=2.5e-08 Score=91.15 Aligned_cols=56 Identities=27% Similarity=0.596 Sum_probs=45.5
Q ss_pred CCCccc-ccccCCCCccceeeccccccccccccCCCccccccccccccCCccccccc
Q 000213 1448 VSMTLC-MCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFES 1503 (1849)
Q Consensus 1448 ~~~~~C-~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~ 1503 (1849)
.+..+| +|...+.++..||+|+.|.+|||+.||+++...+.....|+||.|....+
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 456789 66655545788999999999999999998877777778999999966543
No 75
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.46 E-value=8.1e-08 Score=97.57 Aligned_cols=50 Identities=26% Similarity=0.582 Sum_probs=38.2
Q ss_pred CCcccccccCC------CCccceeeccccccccccccCCCcccc--ccccccccCCcc
Q 000213 1449 SMTLCMCCESD------SKELEFLICSACKDCYHLQCLRPTEVD--RNHAEAYICPYC 1498 (1849)
Q Consensus 1449 ~~~~C~c~~~~------~~~~~~~~C~~C~d~yH~~Cv~~~~~~--~~~~~~~~Cp~C 1498 (1849)
...+|..|..+ ....++|.|+.|+..||.+|++..+.. .-....|.||.|
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C 61 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIEC 61 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTT
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccC
Confidence 45678888665 345689999999999999999854332 223568999999
No 76
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.31 E-value=2e-07 Score=86.02 Aligned_cols=50 Identities=20% Similarity=0.628 Sum_probs=40.2
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
..+...|+|...+ .+..||+|+.|++|||++||+++.... ...|+||.|.
T Consensus 16 ~~~~~~CiC~~~~-~~~~MIqCd~C~~WfH~~Cvgi~~~~~--~~~~~C~~C~ 65 (68)
T 3o70_A 16 FQGLVTCFCMKPF-AGRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCR 65 (68)
T ss_dssp TTTCCCSTTCCCC-TTCCEEECTTTCCEEETTTTTCCTTSC--CSSCCCHHHH
T ss_pred CCCceEeECCCcC-CCCCEEECCCCCccccccccCcCcccC--CCcEECCCCC
Confidence 3466889887654 467899999999999999999775533 4799999994
No 77
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.30 E-value=1.9e-07 Score=87.31 Aligned_cols=56 Identities=20% Similarity=0.441 Sum_probs=43.1
Q ss_pred CCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000213 1446 GSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1446 ~~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1502 (1849)
+..+...|+|...+..+..||+|+.|.+|||..||+++... .....|+||.|....
T Consensus 12 ~~~~~~~C~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~-~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 12 VDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNAD-ALPSKFLCFRCIELS 67 (72)
T ss_dssp SCSSEECCTTCCCSCCSSCEEECSSSCEEEETTTTTCCTTS-CCCSCCCCHHHHHHC
T ss_pred CCCcceEeeCCCccCCCCcEEECCCCCCccCCeeeccCccc-cCCCcEECCCccCCC
Confidence 34566889877554445679999999999999999976543 356899999996543
No 78
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.29 E-value=2.1e-07 Score=81.49 Aligned_cols=47 Identities=21% Similarity=0.706 Sum_probs=38.4
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
...|+|...+. +..||+|+.|++|||++||+++... ....|+||.|.
T Consensus 4 ~~~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~--~~~~~~C~~C~ 50 (52)
T 3o7a_A 4 LVTCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKSN--VPEVFVCQKCR 50 (52)
T ss_dssp CBCSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGGG--CCSSCCCHHHH
T ss_pred CeEEEeCCcCC-CCCEEEcCCCCccccccccCCCccc--CCCcEECcCCC
Confidence 35699886554 6799999999999999999977653 34799999994
No 79
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.29 E-value=1.8e-07 Score=95.30 Aligned_cols=43 Identities=23% Similarity=0.723 Sum_probs=35.4
Q ss_pred EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCC
Q 000213 1712 ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1712 ~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~ 1754 (1849)
+|+++.+++.||.||.|+.|||..|++ ++..| ..|+|+.|...
T Consensus 63 ~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 63 LCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp TTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred cccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 566666667899999999999999999 66655 49999999753
No 80
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.27 E-value=2.2e-07 Score=81.35 Aligned_cols=46 Identities=22% Similarity=0.639 Sum_probs=35.9
Q ss_pred cccccCCCCccceeecc-ccccccccccCCCccccccccccccCCccc
Q 000213 1453 CMCCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1453 C~c~~~~~~~~~~~~C~-~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
|+|..++.++..||+|+ .|.+|||+.||+++...+.. ..|+||.|.
T Consensus 6 c~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~-~~~~C~~C~ 52 (52)
T 2kgg_A 6 QNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAEN-EDYICINCA 52 (52)
T ss_dssp TTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHH-SCCCCSCC-
T ss_pred CCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCC-CCEECCCCC
Confidence 55555555577899999 89999999999977554433 889999993
No 81
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.26 E-value=3.2e-07 Score=91.82 Aligned_cols=47 Identities=34% Similarity=0.839 Sum_probs=41.2
Q ss_pred hhhhhhhcccCCCCCCceeccc--ccCCccccccCCCCCCCCCCCCCccccccc
Q 000213 244 ELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295 (1849)
Q Consensus 244 ~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~ 295 (1849)
..++.|.+|+.+ ..||+|| .|+++||++|+. |..+|+|+|+||.|.-
T Consensus 13 ~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C 61 (107)
T 4gne_A 13 MHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQC 61 (107)
T ss_dssp SSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBC
T ss_pred CCCCCCCcCCCC---CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCC
Confidence 346789999854 4699999 899999999998 9999999999999864
No 82
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.21 E-value=1.8e-07 Score=88.37 Aligned_cols=53 Identities=25% Similarity=0.745 Sum_probs=41.7
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCcccccc----ccccccCCcccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN----HAEAYICPYCQYFE 1502 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~----~~~~~~Cp~C~~~~ 1502 (1849)
...+|+|...+ .+..||+|+.|.+|||+.||+++...+. ....|+||.|....
T Consensus 15 ~~~~C~C~~~~-~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 15 NALYCICRQPH-NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TCCCSTTCCCC-CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCEEECCCcc-CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 35789877555 4568999999999999999998766543 34799999996543
No 83
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.17 E-value=8.6e-07 Score=87.82 Aligned_cols=48 Identities=25% Similarity=0.674 Sum_probs=42.6
Q ss_pred hhhcccCCCCCCceecccccCCccccccCCCCCCCCCCCCCcccccccCC
Q 000213 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD 297 (1849)
Q Consensus 248 ~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~~vP~gdW~C~~C~~~~ 297 (1849)
.| +|+...+++.|+.||.|+.+||+.|+.|++..+|+ +|+|+.|...+
T Consensus 30 rC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~~ 77 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPRN 77 (98)
T ss_dssp CC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSSC
T ss_pred Ee-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCCC
Confidence 47 79888878899999999999999999999999885 89999997643
No 84
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.13 E-value=7.1e-07 Score=77.78 Aligned_cols=43 Identities=33% Similarity=0.916 Sum_probs=36.6
Q ss_pred EeccCCCCCCceeecCCCceEEcccc--cccCCC-CceecCCCcCC
Q 000213 1712 ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1712 ~C~~~~~~~~mi~Cd~C~~W~H~~Cv--g~~~~~-~~~~C~~C~~~ 1754 (1849)
+|+++.+++.||.||.|+.|||..|+ +++..| ..|+|+.|...
T Consensus 5 vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 5 VCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp TTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 78888777789999999999999999 466555 49999999763
No 85
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.06 E-value=3.4e-07 Score=83.77 Aligned_cols=51 Identities=20% Similarity=0.561 Sum_probs=41.0
Q ss_pred CCcccccccCCC-Cccceeecc-ccccccccccCCCccccccccc-----cccCCccc
Q 000213 1449 SMTLCMCCESDS-KELEFLICS-ACKDCYHLQCLRPTEVDRNHAE-----AYICPYCQ 1499 (1849)
Q Consensus 1449 ~~~~C~c~~~~~-~~~~~~~C~-~C~d~yH~~Cv~~~~~~~~~~~-----~~~Cp~C~ 1499 (1849)
+..+|..|..++ ++..||.|+ .|++|||..||+++++.+..+. .|+||.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 346788776665 567899999 9999999999999987766555 99999994
No 86
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.05 E-value=5.7e-07 Score=90.14 Aligned_cols=52 Identities=21% Similarity=0.588 Sum_probs=41.5
Q ss_pred cccccccCCC-Cccceeecc-ccccccccccCCCcccccccc-----ccccCCcccccc
Q 000213 1451 TLCMCCESDS-KELEFLICS-ACKDCYHLQCLRPTEVDRNHA-----EAYICPYCQYFE 1502 (1849)
Q Consensus 1451 ~~C~c~~~~~-~~~~~~~C~-~C~d~yH~~Cv~~~~~~~~~~-----~~~~Cp~C~~~~ 1502 (1849)
-+|..|..++ ++..||.|+ .|++|||+.||+++......+ ..|+||.|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 3577676654 456899998 999999999999887666555 899999997654
No 87
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.03 E-value=1.2e-06 Score=83.09 Aligned_cols=53 Identities=19% Similarity=0.464 Sum_probs=42.6
Q ss_pred CCCcccccccCCCCccceeecc--ccccccccccCCCccccc----cccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICS--ACKDCYHLQCLRPTEVDR----NHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~--~C~d~yH~~Cv~~~~~~~----~~~~~~~Cp~C~~~ 1501 (1849)
.+...|+|...+ .+..||+|+ .|..|||+.||+.+.+.+ .....|.||.|...
T Consensus 14 ~~~~~CiC~~~~-~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 14 EIKVRCVCGNSL-ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCCCSSCCCC-CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCEEeECCCcC-CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 355889887653 556999999 999999999999776544 56789999999554
No 88
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.03 E-value=3.3e-06 Score=78.66 Aligned_cols=52 Identities=23% Similarity=0.630 Sum_probs=38.7
Q ss_pred CCCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccccc
Q 000213 1446 GSVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1446 ~~~~~~~C~c~~~~~~~~~~~~C~~--C~-d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1502 (1849)
+..+..+|+|...+. ..||.|+. |. +|||+.||+++. .. ...|.||.|....
T Consensus 12 d~~~~~~C~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~-~p--~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 12 DPNEPTYCLCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTT-KP--RGKWFCPRCSQES 66 (71)
T ss_dssp CTTSCCCSTTCCCSC--SSEECCSCSSCSCCCEETTTTTCSS-CC--SSCCCCTTTSSCS
T ss_pred CCCCCCEEECCCCCC--CCEeEeeCCCCCCccEecccCCcCc-CC--CCCEECCCCCccc
Confidence 345678998775543 57999999 77 899999999543 22 2579999995443
No 89
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.02 E-value=3.1e-06 Score=82.24 Aligned_cols=53 Identities=25% Similarity=0.652 Sum_probs=39.9
Q ss_pred CCCCCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCccccc
Q 000213 1444 PHGSVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1444 ~~~~~~~~~C~c~~~~~~~~~~~~C~~--C~-d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
+.+..+..+|+|...+. ..||.|+. |. +|||+.||+++. .. ...|.||.|...
T Consensus 30 ~~d~~e~~yCiC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~-~p--~g~W~Cp~C~~~ 85 (91)
T 1weu_A 30 PVDPNEPTYCLCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTT-KP--RGKWFCPRCSQE 85 (91)
T ss_dssp CCCSCCCBCSTTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSS-CC--CSSCCCTTTCCC
T ss_pred CcCCCCCcEEECCCCCC--CCEeEecCCCCCCCCEecccCCcCc-CC--CCCEECcCccCc
Confidence 34446779998886554 47999999 76 999999999543 22 367999999543
No 90
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.98 E-value=1.6e-06 Score=94.94 Aligned_cols=52 Identities=19% Similarity=0.440 Sum_probs=38.7
Q ss_pred CcccccccCCCCcc----ceeeccccccccccccCCCcccccccc------ccccCCccccc
Q 000213 1450 MTLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHA------EAYICPYCQYF 1501 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~~----~~~~C~~C~d~yH~~Cv~~~~~~~~~~------~~~~Cp~C~~~ 1501 (1849)
+++|..|...+.+. .||+|+.|.+|||++||+++......+ ..|+||.|...
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 56797665555544 399999999999999999776433333 38999999433
No 91
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.98 E-value=2.6e-06 Score=82.65 Aligned_cols=49 Identities=14% Similarity=0.493 Sum_probs=37.8
Q ss_pred CCCCcccccccCCCCccceeeccccc---cccccccCCCccccccccccccCCc-ccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACK---DCYHLQCLRPTEVDRNHAEAYICPY-CQY 1500 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~---d~yH~~Cv~~~~~~~~~~~~~~Cp~-C~~ 1500 (1849)
..+..+|+|...+.+ +||.|+.|. +|||+.||+++.. . ...|.||. |..
T Consensus 23 ~~~~~yCiC~~~~~g--~MI~CD~c~C~~eWfH~~CVgl~~~-p--~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 23 NQEEVYCFCRNVSYG--PMVACDNPACPFEWFHYGCVGLKQA-P--KGKWYCSKDCKE 75 (90)
T ss_dssp -CCSCCSTTTCCCSS--SEECCCSSSCSCSCEETTTSSCSSC-T--TSCCCSSHHHHH
T ss_pred CCCCcEEEeCCCCCC--CEEEecCCCCccccCcCccCCCCcC-C--CCCccCChhhcc
Confidence 456689998865554 699999987 9999999995532 2 25899999 963
No 92
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.98 E-value=1.5e-06 Score=78.03 Aligned_cols=48 Identities=25% Similarity=0.703 Sum_probs=36.5
Q ss_pred CCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~--C~-d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
++..+|+|...+. .+||.|+. |. +|||++||+.+. ... ..|.||.|..
T Consensus 7 ~e~~yC~C~~~~~--g~mi~CD~~~C~~~wfH~~Cvgl~~-~p~--~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYCLCHQVSY--GEMIGCDNPDCPIEWFHFACVDLTT-KPK--GKWFCPRCVQ 57 (59)
T ss_dssp -CCEETTTTEECC--SEEEECSCTTCSSCEEETGGGTCSS-CCS--SCCCCHHHHC
T ss_pred CCCcEEECCCCCC--CCeeEeeCCCCCCCCEecccCCccc-CCC--CCEECcCccC
Confidence 4668898886554 47999999 77 899999999543 222 5799999953
No 93
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.93 E-value=2e-06 Score=77.90 Aligned_cols=48 Identities=25% Similarity=0.652 Sum_probs=36.8
Q ss_pred CCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~--C~-d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+..+|+|...+. .+||.|+. |. +|||++||+++.. . ...|.||.|..
T Consensus 9 ~e~~yC~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~-p--~~~w~Cp~C~~ 59 (62)
T 2g6q_A 9 NEPTYCLCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYK-P--KGKWYCPKCRG 59 (62)
T ss_dssp -CCEETTTTEECC--SEEEECSCTTCSSCEEETGGGTCSSC-C--SSCCCCHHHHT
T ss_pred CCCcEEECCCCCC--CCeeeeeCCCCCcccEecccCCcCcC-C--CCCEECcCccc
Confidence 5668899886554 47999999 55 9999999995532 2 46899999953
No 94
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.90 E-value=3.5e-06 Score=77.92 Aligned_cols=52 Identities=19% Similarity=0.549 Sum_probs=38.5
Q ss_pred CCcccccccCCCCccceeeccc--cccccccccCCCcccccccc---ccccCCccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSA--CKDCYHLQCLRPTEVDRNHA---EAYICPYCQYF 1501 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~--C~d~yH~~Cv~~~~~~~~~~---~~~~Cp~C~~~ 1501 (1849)
+.-.|+|.. +..+..||+|+. |..|||+.||+.+...+... ..|.||.|...
T Consensus 9 ~~v~C~C~~-~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 9 AKVRCICSS-TMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CEECCTTCC-CSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCEEeECCC-CcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 346698754 444568999995 99999999999765444333 47999999543
No 95
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.86 E-value=1.8e-06 Score=94.34 Aligned_cols=56 Identities=25% Similarity=0.677 Sum_probs=45.0
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1502 (1849)
..+..+|+|..++..+..||+|+.|.+|||..||++++..+.....|.||.|....
T Consensus 5 ~~~~~~C~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 5 SDTKLYCICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp --CCEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCcEeeCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 34567898776655677899999999999999999877666668899999996554
No 96
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=3.6e-06 Score=78.12 Aligned_cols=50 Identities=24% Similarity=0.545 Sum_probs=39.4
Q ss_pred CCCcccccccCCCCccceeeccccc---cccccccCCCccccccccccccCCcccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACK---DCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~---d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~ 1502 (1849)
++..+|+|...+.+ .||.|+.|. +|||+.||+++.. ....|.||.|....
T Consensus 4 ~~~~yC~C~~~~~g--~MI~CD~cdC~~~WfH~~Cvgl~~~---p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 4 GSSGYCICNQVSYG--EMVGCDNQDCPIEWFHYGCVGLTEA---PKGKWYCPQCTAAM 56 (70)
T ss_dssp SCCCCSTTSCCCCS--SEECCSCTTCSCCCEEHHHHTCSSC---CSSCCCCHHHHHHH
T ss_pred CCCeEEEcCCCCCC--CEeEeCCCCCCccCCcccccccCcC---CCCCEECCCCCccc
Confidence 45678999876544 899999984 9999999995532 25789999996554
No 97
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.80 E-value=4e-06 Score=75.80 Aligned_cols=49 Identities=27% Similarity=0.724 Sum_probs=38.6
Q ss_pred ccCCCceEE-EeccCCCCCCceeecCCCceEEccccccc--CCC-CceecCCCcCC
Q 000213 1703 LRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLL--SAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1703 ~~~~~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~--~~~-~~~~C~~C~~~ 1754 (1849)
..+.+..|| +|+++ +.||.||.|..|||..|++.. ..| ..|+|+.|...
T Consensus 6 ~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 6 YETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred ccCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 344556788 59863 579999999999999999984 334 59999999863
No 98
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.80 E-value=4.3e-06 Score=75.33 Aligned_cols=49 Identities=24% Similarity=0.694 Sum_probs=36.5
Q ss_pred CCCCcccccccCCCCccceeeccc--cc-cccccccCCCccccccccccccCCcccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSA--CK-DCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~--C~-d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.++..+|+|...+. ..||.|+. |. +|||+.||+++ ... ...|.||.|..
T Consensus 7 ~~e~~~C~C~~~~~--g~mi~CD~cdC~~~wfH~~Cvgl~-~~p--~g~w~C~~C~~ 58 (60)
T 2vnf_A 7 PNEPTYCLCHQVSY--GEMIGCDNPDCSIEWFHFACVGLT-TKP--RGKWFCPRCSQ 58 (60)
T ss_dssp --CCEETTTTEECC--SEEEECSCTTCSSCEEETGGGTCS-SCC--SSCCCCHHHHC
T ss_pred CCCCCEEECCCcCC--CCEEEeCCCCCCCceEehhcCCCC-cCC--CCCEECcCccC
Confidence 35678898886554 57999999 66 99999999944 332 25799999953
No 99
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=97.76 E-value=6.1e-06 Score=75.83 Aligned_cols=48 Identities=25% Similarity=0.719 Sum_probs=38.0
Q ss_pred CCceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCCC
Q 000213 1706 RSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1706 ~~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~~~ 1756 (1849)
.+..+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+|+.|...+.
T Consensus 6 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 6 KNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp SCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 344566 68853 5799999999999999999 55555 5999999987555
No 100
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=97.75 E-value=4e-06 Score=78.04 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=41.4
Q ss_pred CCCceEEEeccCC--CCCCceeecCCCceEEcccccccCCC-CceecCCCcCCC
Q 000213 1705 ARSMLYCICRKPY--DEKAMIACYQCDEWYHIDCVKLLSAP-EIYICAACKPQA 1755 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~--~~~~mi~Cd~C~~W~H~~Cvg~~~~~-~~~~C~~C~~~~ 1755 (1849)
+......+|+.+. +++.||.||.|+.|||..|+|+...| ..|+|+.|....
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSR 67 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCcC
Confidence 3444566998775 45789999999999999999998765 499999998643
No 101
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.74 E-value=4e-06 Score=87.83 Aligned_cols=52 Identities=27% Similarity=0.714 Sum_probs=44.2
Q ss_pred chhhhhhhcccCCCCCCceecccccCCccccccCCCCCC-----C--CCCCCCcccccccCC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLK-----H--VPRGNWYCLECLNSD 297 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL~-----~--vP~gdW~C~~C~~~~ 297 (1849)
+..++.|.+|+.|. .+++||.|.+.||..|+.|||. + .|.|+|+|+.|...+
T Consensus 60 Dg~~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 60 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp TSCBCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCCCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 44567899999874 4999999999999999999986 3 589999999998643
No 102
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=97.71 E-value=3e-06 Score=82.24 Aligned_cols=52 Identities=17% Similarity=0.482 Sum_probs=42.5
Q ss_pred CCCceEEEeccCC--CCCCceeecCCCceEEcccccccCCC-CceecCCCcCCCC
Q 000213 1705 ARSMLYCICRKPY--DEKAMIACYQCDEWYHIDCVKLLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~--~~~~mi~Cd~C~~W~H~~Cvg~~~~~-~~~~C~~C~~~~~ 1756 (1849)
+.+...++|+.+. ++..||.||.|+.|||..|+|+...| ..|+|+.|.....
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTT
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccc
Confidence 4455677998775 44679999999999999999998755 4999999987544
No 103
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=6.7e-06 Score=73.05 Aligned_cols=44 Identities=34% Similarity=1.014 Sum_probs=35.5
Q ss_pred CceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcC
Q 000213 1707 SMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKP 1753 (1849)
Q Consensus 1707 ~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~ 1753 (1849)
+..+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+|+.|..
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 34567 68864 4799999999999999999 55555 5999999964
No 104
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.65 E-value=7.6e-06 Score=73.77 Aligned_cols=43 Identities=37% Similarity=1.076 Sum_probs=34.9
Q ss_pred eEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCC
Q 000213 1709 LYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1709 ~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~ 1754 (1849)
.+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+|+.|...
T Consensus 6 ~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 6 DFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp SSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 455 78753 5799999999999999999 55555 49999999763
No 105
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.64 E-value=5.7e-05 Score=89.94 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=82.9
Q ss_pred eeEEecCCCcHHHHHHHHHhhCCCcc---cCChhhhhhhccccChhh----hhhCCCceeecccCCccEEEEcCCcccee
Q 000213 450 KCWYSVPGSEAGAFEKVMRSSLPDLF---DAQPDLLFQLVTMLNPSV----LVENGVPVYSVLQEPGNFVITFPRSYHAG 522 (1849)
Q Consensus 450 K~WY~VP~~~~~kfe~~~~~~~p~~~---~~~pd~l~~~~~~~~P~~----L~~~GIpv~~~~Q~pGefVitfP~ayH~g 522 (1849)
-+|-...+.+++|+.+++++...++- ....|-+|.+.+.++... ..+.||..+.++|+|||.|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHhhCCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHH
Confidence 78999999999999999998754321 122467888888898843 34589999999999999999999999999
Q ss_pred eccCccceeecccCCCCchhchhhhHHHHHH
Q 000213 523 FNFGLNCAEAVNFAPADWLPHGGFGADLYQQ 553 (1849)
Q Consensus 523 ~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~ 553 (1849)
.|.+-++..|+||..+.-+.....-.+.+|.
T Consensus 314 ~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred hcccchhhHhhhhcChhhHHHHHHHHHHHhh
Confidence 9999999999999999877655444444443
No 106
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=97.61 E-value=0.00013 Score=87.80 Aligned_cols=138 Identities=13% Similarity=0.038 Sum_probs=98.5
Q ss_pred ceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhhhhhC
Q 000213 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN 497 (1849)
Q Consensus 418 P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~ 497 (1849)
-|+|+|+.+|.+.+|++-....+-|.+..| -|.||-+||+... +. +.+..... ..+.+ .++ + ..
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~s--~~~~e------~~~-~----~~ 212 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS--SNQNE------MFF-G----DQ 212 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHTS--TTGGG------SCG-G----GT
T ss_pred eEEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCccc-cc-cccccccC--Cccch------hhc-c----cc
Confidence 389999999999999999888888888888 9999999998753 21 11111110 00111 111 1 12
Q ss_pred CCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHHHHHHhcCCC--CCCh-HHHHHHHhh
Q 000213 498 GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAA--VLSH-EELLCVVAK 571 (1849)
Q Consensus 498 GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~--vfs~-~~Ll~~~A~ 571 (1849)
....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++.-....+.=+..+... -||+ +.++|-+|+
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~ 289 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGK 289 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHH
T ss_pred cCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999988877666554433444333 2444 677777664
No 107
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=97.59 E-value=1.9e-05 Score=71.34 Aligned_cols=47 Identities=28% Similarity=0.854 Sum_probs=36.7
Q ss_pred CCCceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCC
Q 000213 1705 ARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQ 1754 (1849)
Q Consensus 1705 ~~~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~ 1754 (1849)
|.+..+| +|+. ++.||.||.|..+||..|++ ++..| ..|+|+.|...
T Consensus 6 d~~~~~C~vC~~---~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKD---GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCC---CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCC---CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3344566 6874 45799999999999999999 55544 49999999864
No 108
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.58 E-value=1.5e-05 Score=79.75 Aligned_cols=46 Identities=24% Similarity=0.544 Sum_probs=37.2
Q ss_pred CCCceEEEeccCCCCCCceeec--CCCceEEcccccccCCCC-ceecCCCc
Q 000213 1705 ARSMLYCICRKPYDEKAMIACY--QCDEWYHIDCVKLLSAPE-IYICAACK 1752 (1849)
Q Consensus 1705 ~~~~~yC~C~~~~~~~~mi~Cd--~C~~W~H~~Cvg~~~~~~-~~~C~~C~ 1752 (1849)
+.+..||.+-+ +++.||.|| .|..|||..|+|++..|+ .|+||.|.
T Consensus 12 ~~~~~~C~~C~--~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~ 60 (107)
T 4gne_A 12 QMHEDYCFQCG--DGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQ 60 (107)
T ss_dssp CSSCSSCTTTC--CCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGB
T ss_pred CCCCCCCCcCC--CCCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCC
Confidence 34556887543 456799999 899999999999988775 99999875
No 109
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=97.56 E-value=0.00017 Score=87.30 Aligned_cols=135 Identities=11% Similarity=0.047 Sum_probs=99.4
Q ss_pred eeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHH--HHHHHHhhCCCcccCChhhhhhhccccChhhhhh
Q 000213 419 WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGA--FEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVE 496 (1849)
Q Consensus 419 ~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~k--fe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~ 496 (1849)
|+|+|+.+|.+.+|++-...++.|.+..| .|.||-+||....- ++..... +. +.+ .++ ++
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl~~y~~~~~s--~~----~~e------~~~-~~---- 238 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANISLYERWRSA--SN----HSE------MFF-AD---- 238 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHHS--TT----GGG------SCG-GG----
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccccchhhcccC--cc----hhh------hhh-cc----
Confidence 89999999999999999888888888888 99999999987531 2222111 00 011 111 12
Q ss_pred CCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHHHHHHhcCCC--CCCh-HHHHHHHhh
Q 000213 497 NGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAA--VLSH-EELLCVVAK 571 (1849)
Q Consensus 497 ~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~--vfs~-~~Ll~~~A~ 571 (1849)
.....++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++....+.+.=+..+... -||+ +.|+|-+|+
T Consensus 239 ~~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~wy~~~ 316 (392)
T 3pua_A 239 QVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGK 316 (392)
T ss_dssp GSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHHHHHH
T ss_pred cccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHHHHHH
Confidence 12466899999999999999999999999999999999999998887766665433333333 3443 677786664
No 110
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.53 E-value=6.7e-05 Score=70.93 Aligned_cols=64 Identities=23% Similarity=0.481 Sum_probs=47.8
Q ss_pred ccceeeec------CCCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1435 HRSLYIYN------KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1435 ~~~~~~~~------~~~~~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
+++.++|= ..+.|.+- .|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 6 ~~~~~~~c~~C~~~~~w~C~~c-~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 75 (77)
T 2e6s_A 6 SGRNDTECDLCGGDPEKKCHSC-SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCK 75 (77)
T ss_dssp CCCCCCCCTTTCSCSSSCCSSS-SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTC
T ss_pred cccCCccChhhcCCCCeECCCC-CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCcc
Confidence 34456663 33444443 667776666778999999999999999999876766666689999994
No 111
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.52 E-value=3.1e-05 Score=80.59 Aligned_cols=35 Identities=34% Similarity=0.915 Sum_probs=30.0
Q ss_pred ceeecCCCceEEcccccccCC--------C--CceecCCCcCCCC
Q 000213 1722 MIACYQCDEWYHIDCVKLLSA--------P--EIYICAACKPQAE 1756 (1849)
Q Consensus 1722 mi~Cd~C~~W~H~~Cvg~~~~--------~--~~~~C~~C~~~~~ 1756 (1849)
||+||.|++|||+.|+|++.+ + ..|.||.|.....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 999999999999999999852 2 3799999987554
No 112
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.49 E-value=0.00017 Score=87.48 Aligned_cols=137 Identities=15% Similarity=0.082 Sum_probs=96.9
Q ss_pred eeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhhhhhCC
Q 000213 419 WLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498 (1849)
Q Consensus 419 ~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~~~G 498 (1849)
|+++|+.+|.+.+|++-....+.|.+..| .|.||-+||..... .+...... ..+ +...++ +. ..
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl--~ly~~~~~----s~~----~~e~~~-~~----~~ 241 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWSS----SVT----QSEVFF-GD----KV 241 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHHT----SGG----GGGSCG-GG----GS
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCccccc--cccccccc----CCC----cchhhh-cc----cc
Confidence 89999999999999999999888888888 99999999987641 11121110 000 001111 11 22
Q ss_pred CceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHHHHHHhcCCCC--CC-hHHHHHHHhh
Q 000213 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAV--LS-HEELLCVVAK 571 (1849)
Q Consensus 499 Ipv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~~y~~~~~~~v--fs-~~~Ll~~~A~ 571 (1849)
...++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++....+.+.=...+-..- || .++|+|-+|+
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w~~a~ 317 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAK 317 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999888776655443333332222 33 3556666554
No 113
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=97.43 E-value=8.6e-05 Score=80.14 Aligned_cols=49 Identities=14% Similarity=0.373 Sum_probs=34.4
Q ss_pred CceEEEeccCCC-CCCceeecCCCceEEcccccccC---CC-C---ceecCCCcCCC
Q 000213 1707 SMLYCICRKPYD-EKAMIACYQCDEWYHIDCVKLLS---AP-E---IYICAACKPQA 1755 (1849)
Q Consensus 1707 ~~~yC~C~~~~~-~~~mi~Cd~C~~W~H~~Cvg~~~---~~-~---~~~C~~C~~~~ 1755 (1849)
...||.|+.|.+ +..|++|+.|..|||..|++... .+ + .|+|..|....
T Consensus 4 ~~~yCYCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 4 QAGSVDEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eeeEEEcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 457999998887 46799999999999999998654 22 3 78899998754
No 114
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.42 E-value=5.7e-05 Score=73.89 Aligned_cols=57 Identities=25% Similarity=0.654 Sum_probs=45.9
Q ss_pred CCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1444 ~~~~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
++++.+...|..|........||.|+.|..+||..|++|.+..... ..|.||.|...
T Consensus 10 ~~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~-g~W~C~~C~~~ 66 (92)
T 2e6r_A 10 SAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPR-GIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCS-SCCCCHHHHHH
T ss_pred hhhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCC-CCcCCccCcCc
Confidence 4566777889988776667789999999999999999965554443 58999999764
No 115
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.38 E-value=0.00074 Score=83.61 Aligned_cols=136 Identities=12% Similarity=-0.010 Sum_probs=95.7
Q ss_pred ceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHH--HHHHHHhhCCCcccCChhhhhhhccccChhhhh
Q 000213 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGA--FEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1849)
Q Consensus 418 P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~k--fe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~ 495 (1849)
-|+++|+.+|.+.+|++-....+.|.+..| .|.|+-+||+.... +..... .+ .+.+. .-|+.
T Consensus 198 r~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~~y~~~~~--s~----~q~~~-------~~p~~-- 261 (451)
T 2yu1_A 198 KYCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLELYENWLL--SG----SQGDI-------FLGDR-- 261 (451)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHHHHHHHHH--TT----CCSSS-------CHHHH--
T ss_pred eEEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCcccccccccccc--cc----cchhh-------hhccc--
Confidence 488999999999999999888788877777 89999999998542 111111 11 11111 11222
Q ss_pred hCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhchhhhHH--HHHHhcCCCCCCh-HHHHHHHhh
Q 000213 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGAD--LYQQYHKAAVLSH-EELLCVVAK 571 (1849)
Q Consensus 496 ~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~g~~~~~--~y~~~~~~~vfs~-~~Ll~~~A~ 571 (1849)
.-..+++++.|||.+++-.|=+|.++|..-+++...||.+..=++.-....+ .-......-.||+ +.|+|-+|.
T Consensus 262 --~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w~~~~ 338 (451)
T 2yu1_A 262 --VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLE 338 (451)
T ss_dssp --SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHH
T ss_pred --cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHHHHHH
Confidence 1246889999999999999999999999999999999999887775544333 2222233444555 567776664
No 116
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.32 E-value=0.00017 Score=67.01 Aligned_cols=55 Identities=22% Similarity=0.587 Sum_probs=43.5
Q ss_pred CCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1444 ~~~~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
++.|.+= .|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 13 ~w~C~~C-~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~ 67 (70)
T 3asl_A 13 NRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 67 (70)
T ss_dssp TSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTS
T ss_pred CeECCCC-CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCcc
Confidence 3444444 566776666778999999999999999999877776666699999995
No 117
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=97.31 E-value=7.1e-05 Score=68.67 Aligned_cols=43 Identities=23% Similarity=0.556 Sum_probs=33.7
Q ss_pred EEEeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCC
Q 000213 1710 YCICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQA 1755 (1849)
Q Consensus 1710 yC~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~~ 1755 (1849)
.-+|+ +++.||.||.|+.|||..|++ ++..| ..|+|+.|+...
T Consensus 15 C~vC~---~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 15 CGVCG---DGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTTS---CCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred cCCCC---CCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 44776 345699999999999999996 44554 489999998643
No 118
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.24 E-value=2.1e-05 Score=81.13 Aligned_cols=51 Identities=27% Similarity=0.779 Sum_probs=42.7
Q ss_pred chhhhhhhcccCCCCCCceecccccCCccccccCCCCC-----CCC--CCCCCcccccccC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPL-----KHV--PRGNWYCLECLNS 296 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PPL-----~~v--P~gdW~C~~C~~~ 296 (1849)
+..++.|.+|+.|. .+++||.|.+.||..|+.|++ .++ |.|+|+|+.|...
T Consensus 54 Dg~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 54 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TSCBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 44567899999773 589999999999999999984 455 8999999999764
No 119
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.21 E-value=0.00022 Score=85.63 Aligned_cols=117 Identities=21% Similarity=0.222 Sum_probs=85.4
Q ss_pred cceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCccc-----CChhhhhhhccccCh
Q 000213 417 VPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFD-----AQPDLLFQLVTMLNP 491 (1849)
Q Consensus 417 ~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~-----~~pd~l~~~~~~~~P 491 (1849)
..|+|+|..+|.+.+|.+.....++|.+..| .|.|+-+|++....+-. .+.... ...+++.. .-|
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~-----~~~~~~~~~~~~~~~w~~~----~~P 242 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIK-----VTRDEGGNQQDEAITWFNV----IYP 242 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHC-----CCHHHHGGGTTCHHHHHHH----TGG
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhccc-----CcccccCCCccchhhhhhh----hCc
Confidence 4688999999999999999888888888887 89999999997543321 110000 00111110 112
Q ss_pred hhhhh---CCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCCchhc
Q 000213 492 SVLVE---NGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543 (1849)
Q Consensus 492 ~~L~~---~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~Wl~~ 543 (1849)
..-.. .+.+.+.++|+|||.+++-+|-+|++.|.+-+++.+.||.++..++.
T Consensus 243 ~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 243 RTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPV 297 (336)
T ss_dssp GGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHH
T ss_pred chhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHH
Confidence 21111 24678899999999999999999999999999999999999987654
No 120
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=97.20 E-value=8.2e-05 Score=68.23 Aligned_cols=49 Identities=24% Similarity=0.592 Sum_probs=38.3
Q ss_pred ceEEEeccCCC--CCCceeecCCCceEEcccccccC------CCCceecCCCcCCCC
Q 000213 1708 MLYCICRKPYD--EKAMIACYQCDEWYHIDCVKLLS------APEIYICAACKPQAE 1756 (1849)
Q Consensus 1708 ~~yC~C~~~~~--~~~mi~Cd~C~~W~H~~Cvg~~~------~~~~~~C~~C~~~~~ 1756 (1849)
....+|+.+++ ++.||.||.|+.+||..|++..- +...|+|+.|.....
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 34558987743 47899999999999999999742 335899999987443
No 121
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.19 E-value=0.00012 Score=76.13 Aligned_cols=40 Identities=20% Similarity=0.507 Sum_probs=32.3
Q ss_pred ceeeccccccccccccCCCcc------ccccccccccCCccccccc
Q 000213 1464 EFLICSACKDCYHLQCLRPTE------VDRNHAEAYICPYCQYFES 1503 (1849)
Q Consensus 1464 ~~~~C~~C~d~yH~~Cv~~~~------~~~~~~~~~~Cp~C~~~~~ 1503 (1849)
.||.|+.|+||||..|++... ........|.||.|.....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 389999999999999999664 4445566899999976643
No 122
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.06 E-value=0.00044 Score=65.33 Aligned_cols=56 Identities=21% Similarity=0.567 Sum_probs=44.8
Q ss_pred CCCCCCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1443 ~~~~~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.++.|..= .|..|........++.|+.|..+||+.|+.|.+........|.||.|.
T Consensus 20 ~~W~C~~C-~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~ 75 (77)
T 3shb_A 20 VNRLCRVC-ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 75 (77)
T ss_dssp TTSCCTTT-SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC
T ss_pred CCCCCCCC-cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcc
Confidence 34455555 566777777778999999999999999999877777776669999994
No 123
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.00 E-value=0.00019 Score=80.56 Aligned_cols=47 Identities=28% Similarity=0.808 Sum_probs=36.2
Q ss_pred CceEE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCCC
Q 000213 1707 SMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1707 ~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~~~ 1756 (1849)
+.-+| +|+.+ +.||.||.|..|||..|++ ++..| ..|+||.|.....
T Consensus 6 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 34456 78744 4599999999999999994 45444 4899999997554
No 124
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=96.84 E-value=0.00041 Score=76.40 Aligned_cols=44 Identities=25% Similarity=0.873 Sum_probs=34.5
Q ss_pred EE-EeccCCCCCCceeecCCCceEEccccc--ccCCC-CceecCCCcCCCC
Q 000213 1710 YC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1710 yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg--~~~~~-~~~~C~~C~~~~~ 1756 (1849)
+| +|+.+ +.|+.||.|..|||..|++ ++..| ..|+|+.|+....
T Consensus 6 ~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 6 WCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp SCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred ccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 44 68743 5699999999999999994 44444 4899999997654
No 125
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.83 E-value=0.0013 Score=74.14 Aligned_cols=109 Identities=16% Similarity=0.130 Sum_probs=73.7
Q ss_pred ccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhh--
Q 000213 416 MVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV-- 493 (1849)
Q Consensus 416 ~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~-- 493 (1849)
..+++|+|..+|.+.+|.+.. .+++.+..| .|.|.-+|+++...+ +|...... .-...+-...|+.
T Consensus 124 ~~~~~wiG~~gs~t~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l-------~~~~~~~~--~~~s~vd~~~~d~~~ 191 (235)
T 4gjz_A 124 ITINAWFGPQGTISPLHQDPQ--QNFLVQVMG-RKYIRLYSPQESGAL-------YPHDTHLL--HNTSQVDVENPDLEK 191 (235)
T ss_dssp CEEEEEEECTTCEEEEECCSS--EEEEEEEES-CEEEEEECGGGGGGS-------CBCSSTTT--TTBBSSCTTSCCTTT
T ss_pred cceEEEEeCCCCCceeeeccc--cceEEEEee-eEeeEEcCccccccc-------ccCccccc--CccccccccCcchhh
Confidence 346799999999999999875 456666666 999999999886532 22110000 0000011111110
Q ss_pred -hhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccC
Q 000213 494 -LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 536 (1849)
Q Consensus 494 -L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa 536 (1849)
=.-.+.+.+.++|+|||.+++=+|-+|.+.|.+.|++.++||+
T Consensus 192 ~p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 192 FPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp CGGGGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred CccccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 0113467889999999999999999999999999887777663
No 126
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=96.76 E-value=0.00067 Score=76.15 Aligned_cols=48 Identities=25% Similarity=0.731 Sum_probs=36.9
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.|..|........|+.|+.|..+||+.|++|.+........|.||.|.
T Consensus 176 ~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~ 223 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECR 223 (226)
T ss_dssp SCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC
T ss_pred CCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCc
Confidence 577776666678999999999999999999877766655689999994
No 127
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=96.32 E-value=0.0037 Score=60.34 Aligned_cols=51 Identities=29% Similarity=0.800 Sum_probs=39.8
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
+....+|..|... ..++.|+.|...||..|+.|.+..... ..|.||.|...
T Consensus 22 d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~-g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPG-EEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCS-SSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcC-CCcCCccccCC
Confidence 3455789999543 369999999999999999876655444 58999999754
No 128
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.04 E-value=0.0029 Score=64.43 Aligned_cols=37 Identities=24% Similarity=0.722 Sum_probs=28.8
Q ss_pred CCceeecCCCceEEcccccccCC-------CCceecCCCcCCCC
Q 000213 1720 KAMIACYQCDEWYHIDCVKLLSA-------PEIYICAACKPQAE 1756 (1849)
Q Consensus 1720 ~~mi~Cd~C~~W~H~~Cvg~~~~-------~~~~~C~~C~~~~~ 1756 (1849)
..||+|+.|++|||..|+++..+ ++.|.||.|.+.+.
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~~ 116 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDS 116 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC----
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCCC
Confidence 46999999999999999998742 34799999998543
No 129
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.78 E-value=0.0015 Score=61.30 Aligned_cols=50 Identities=26% Similarity=0.595 Sum_probs=41.0
Q ss_pred hhhhhhcccCCCCCCceecccccCCccccccCCCC------------CCCCCCCCCccccccc
Q 000213 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP------------LKHVPRGNWYCLECLN 295 (1849)
Q Consensus 245 ~~~~C~~C~~~~~~~~lLlCD~Cd~~yH~~CL~PP------------L~~vP~gdW~C~~C~~ 295 (1849)
.|+.|.+|..-. .+.++-|..|.+.||..||.++ +...+.+-|.|+.|.+
T Consensus 14 ~D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCcccccc-ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 367899998554 3568899999999999999876 5566778999999965
No 130
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.68 E-value=0.0023 Score=62.02 Aligned_cols=53 Identities=21% Similarity=0.578 Sum_probs=40.1
Q ss_pred CcccccccCCCC--ccceeeccccccccccccCCCcccc---ccccccccCCcccccc
Q 000213 1450 MTLCMCCESDSK--ELEFLICSACKDCYHLQCLRPTEVD---RNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1450 ~~~C~c~~~~~~--~~~~~~C~~C~d~yH~~Cv~~~~~~---~~~~~~~~Cp~C~~~~ 1502 (1849)
..+|..|..... +..++.|+.|...||..|++|.+.. .-....|.|+.|....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 367888854432 4689999999999999999976553 2345689999996654
No 131
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.68 E-value=0.007 Score=73.18 Aligned_cols=111 Identities=18% Similarity=0.092 Sum_probs=73.3
Q ss_pred cccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhh-
Q 000213 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV- 493 (1849)
Q Consensus 415 v~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~- 493 (1849)
+.+.++|+|..+|.+.+|.+.+ .+++.+..| .|.|.-+|+.+...+ +|..... +.--...+.+-.|+.
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~l-------y~~~~~~-~~~~~s~vd~~~~d~~ 250 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECL-------YPYPVHH-PCDRQSQVDFDNPDYE 250 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHH-------CBBCTTS-TTBTBBCSCTTSCCTT
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhh-------ccccccC-CCCCcccccCCCcchh
Confidence 4567899999999999999765 566667777 999999999986533 2210000 000000001111210
Q ss_pred --hhhCCCceeecccCCccEEEEcCCccceeeccC-ccceeecccC
Q 000213 494 --LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG-LNCAEAVNFA 536 (1849)
Q Consensus 494 --L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G-~n~~eavNfa 536 (1849)
-.-.+.+.+.++++|||.+++-+|-+|.+.|.+ -.++.||||-
T Consensus 251 ~~p~~~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w 296 (349)
T 3d8c_A 251 RFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 (349)
T ss_dssp TCGGGGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEE
T ss_pred hCcccccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEE
Confidence 001235789999999999999999999999986 3566667763
No 132
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=94.96 E-value=0.023 Score=68.45 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=76.1
Q ss_pred cccceeeeccccccceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCC--c----ccCChhhhhhhccc
Q 000213 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPD--L----FDAQPDLLFQLVTM 488 (1849)
Q Consensus 415 v~~P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~--~----~~~~pd~l~~~~~~ 488 (1849)
+..+++++|..++.+.+|.+.+ .+++.+..| .|.|.-.|+.+...+ ++. . -...||+ -
T Consensus 166 ~~~s~l~~g~~g~~~~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l-------y~~~~~~~~~d~~~~d~------~ 229 (338)
T 3al5_A 166 FFSSVFRISSPGLQLWTHYDVM--DNLLIQVTG-KKRVVLFSPRDAQYL-------YLKGTKSEVLNIDNPDL------A 229 (338)
T ss_dssp EEEEEEEEECTTCEEEEECCSS--EEEEEECSS-CEEEEEECGGGGGGG-------TEETTEESCCCSSSCCT------T
T ss_pred cccceeEECCCCCCccceECCc--ccEEEEEEE-EEEEEEECccccccc-------ccCCCCcccccCCCcch------h
Confidence 3456899999999999999775 355556666 999999999876432 110 0 0001221 0
Q ss_pred cChhhhhhCCCceeecccCCccEEEEcCCccceeeccCccceeecccCCCC
Q 000213 489 LNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPAD 539 (1849)
Q Consensus 489 ~~P~~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G~n~~eavNfa~~~ 539 (1849)
.-|. + .+.+.+.++++|||.+++-+|-+|.+.|.+.+++.+++|....
T Consensus 230 ~~p~-~--~~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 230 KYPL-F--SKARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp TCTT-G--GGCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred hCcc-c--ccCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 1122 1 1357899999999999999999999999999999998886644
No 133
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=94.74 E-value=0.013 Score=64.68 Aligned_cols=42 Identities=29% Similarity=0.846 Sum_probs=33.6
Q ss_pred EeccCCCCCCceeecCCCceEEcccc--cccCCC-CceecCCCcCCCC
Q 000213 1712 ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAP-EIYICAACKPQAE 1756 (1849)
Q Consensus 1712 ~C~~~~~~~~mi~Cd~C~~W~H~~Cv--g~~~~~-~~~~C~~C~~~~~ 1756 (1849)
+|+ .++.++.||.|...||..|+ +++..| ..|+|+.|.....
T Consensus 7 ~C~---~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 7 VCQ---KPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 51 (189)
T ss_dssp TTC---CCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSCC
T ss_pred cCC---CCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCCC
Confidence 566 33569999999999999999 566654 5999999987643
No 134
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=92.21 E-value=0.079 Score=57.37 Aligned_cols=51 Identities=10% Similarity=0.109 Sum_probs=33.8
Q ss_pred cccccccCCCCccceeeccccccccccccCCCcccccc---ccccccCCccccc
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN---HAEAYICPYCQYF 1501 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~---~~~~~~Cp~C~~~ 1501 (1849)
..|-|=.+.--...|++|+.|+.|||.+|++...++.- .--.++|..|+.-
T Consensus 6 ~yCYCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 6 GSVDEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred eEEEcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 45766655566778999999999999999995443322 2345679999553
No 135
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=91.78 E-value=0.052 Score=55.19 Aligned_cols=40 Identities=25% Similarity=0.511 Sum_probs=31.2
Q ss_pred CCceecccccCCccccccCCCCCCCCCCC----CCcccccccCC
Q 000213 258 GEVMLLCDRCNKGWHVYCLSPPLKHVPRG----NWYCLECLNSD 297 (1849)
Q Consensus 258 ~~~lLlCD~Cd~~yH~~CL~PPL~~vP~g----dW~C~~C~~~~ 297 (1849)
++.|+.|+.|+..||..|+.++.+.++.+ .|+|+.|...+
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 45688999999999999999887665544 49999998654
No 136
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=87.08 E-value=0.26 Score=46.55 Aligned_cols=53 Identities=23% Similarity=0.588 Sum_probs=40.8
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCc-----------cccccccccccCCcccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT-----------EVDRNHAEAYICPYCQYFE 1502 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~-----------~~~~~~~~~~~Cp~C~~~~ 1502 (1849)
....|-.|. ......++.|-+|...||..|++.. ...+.+..-|.|++|..+.
T Consensus 14 ~D~~C~VC~-~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~ 77 (89)
T 1wil_A 14 NDEMCDVCE-VWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNIN 77 (89)
T ss_dssp CSCCCTTTC-CCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCC
T ss_pred CCcccCccc-cccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhh
Confidence 446798883 4457788999999999999999831 2456677889999996653
No 137
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=86.02 E-value=0.58 Score=55.50 Aligned_cols=85 Identities=14% Similarity=0.146 Sum_probs=52.2
Q ss_pred ccCCCCchHHHHHHHHhh----hccceeeecCCCCCCCCcccccccCCCCc-cce--eecc--ccccccccccCCCcccc
Q 000213 1416 SVGDKNSLLGLLQKIKQS----VHRSLYIYNKPHGSVSMTLCMCCESDSKE-LEF--LICS--ACKDCYHLQCLRPTEVD 1486 (1849)
Q Consensus 1416 ~~~~~~sl~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~C~c~~~~~~~-~~~--~~C~--~C~d~yH~~Cv~~~~~~ 1486 (1849)
+=+.+.|++.-|+.|++. .+....--.+..+......|++|.....+ ..+ ..|. .|++.||..|+-.=...
T Consensus 270 ~Wd~d~si~eNL~~IL~i~~fP~p~~~~~~~~~e~ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs 349 (381)
T 3k1l_B 270 NWDSEMNIHKNLLRMFDLCYFPMPDWSDGPKLDEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKT 349 (381)
T ss_dssp TCCTTSCHHHHHHHHTTCSSCCCCCGGGCCSCTTCCCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHH
T ss_pred hcCccCCHHHHHHHHhCccccCCCcccccccccccccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHh
Confidence 334678999999999776 11111100111123455889999888776 333 5798 89999999999622211
Q ss_pred c---cc---cccccCCcccc
Q 000213 1487 R---NH---AEAYICPYCQY 1500 (1849)
Q Consensus 1487 ~---~~---~~~~~Cp~C~~ 1500 (1849)
. +. .-.-.||+|..
T Consensus 350 ~~~sRqSFnvi~G~CPyCr~ 369 (381)
T 3k1l_B 350 LMDGKTFLEVSFGQCPFCKA 369 (381)
T ss_dssp HHSSSCTTTCCEEECTTTCC
T ss_pred CCCccccccccCCCCCCCCC
Confidence 1 11 12247999954
No 138
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=85.58 E-value=1.4 Score=53.00 Aligned_cols=115 Identities=15% Similarity=0.088 Sum_probs=72.4
Q ss_pred ceeeeccccccceeEecCCCcceeeeeecCCCeeEEec-CCCcHHHHHHHHHhhCCCcccCC----hhhhhhhccccChh
Q 000213 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV-PGSEAGAFEKVMRSSLPDLFDAQ----PDLLFQLVTMLNPS 492 (1849)
Q Consensus 418 P~lyvGm~fS~f~WH~Ed~~l~SiNy~h~G~~K~WY~V-P~~~~~kfe~~~~~~~p~~~~~~----pd~l~~~~~~~~P~ 492 (1849)
+.+|+|-.++.+..|.+++. .+..+..| .|.|... |+.....+ .+.-.... .++......-+ |.
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~-p~ 211 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNPM-------QHYDLSEAPYYPDDLQSYWKGDP-PK 211 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSCS-------SCEECC----CCHHHHHHCCSCC-CC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCcccccc-------Ccccccccccccccccccchhhc-cc
Confidence 34899988999999998654 33444456 8999999 77642111 11000000 00000000000 11
Q ss_pred hhhhCCCceeecccCCccEEEEcCCccceeeccC--ccceeecccCCCCchhchhhhH
Q 000213 493 VLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG--LNCAEAVNFAPADWLPHGGFGA 548 (1849)
Q Consensus 493 ~L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G--~n~~eavNfa~~~Wl~~g~~~~ 548 (1849)
+ ...+.+.++-+|||.++.-+|..|.+.+.| -+++-++| .++|..+.....
T Consensus 212 -~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l 264 (342)
T 1vrb_A 212 -E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAAL 264 (342)
T ss_dssp -T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHH
T ss_pred -c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHH
Confidence 1 226788999999999999999999999993 67777777 788987665444
No 139
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.38 E-value=0.27 Score=45.50 Aligned_cols=48 Identities=25% Similarity=0.598 Sum_probs=37.5
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
..+...|.+|..+......+..-.|++.||..|+...... ...||.|.
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~-----~~~CP~Cr 67 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA-----NRTCPICR 67 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH-----CSSCTTTC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc-----CCcCcCcC
Confidence 4456789999988887777777779999999999854332 35899994
No 140
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=81.57 E-value=0.41 Score=43.43 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=35.1
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.....|.+|.........+..-.|++.||..|+...... ...||.|..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~ 59 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT-----NKKCPICRV 59 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc-----CCCCcCcCc
Confidence 345789999888776656666679999999999844332 235999943
No 141
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=77.38 E-value=0.87 Score=39.18 Aligned_cols=45 Identities=20% Similarity=0.467 Sum_probs=32.4
Q ss_pred CcccccccCCCCcccee-eccccccccccccCCCccccccccccccCCccc
Q 000213 1450 MTLCMCCESDSKELEFL-ICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~~~~~-~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
...|.+|..+..+...+ ....|++.||..|+...... ...||.|.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~-----~~~CP~Cr 50 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS-----HSTCPLCR 50 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT-----CCSCSSSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc-----CCcCcCCC
Confidence 35699998888775543 33469999999999844322 35799993
No 142
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=75.58 E-value=1.1 Score=46.92 Aligned_cols=47 Identities=19% Similarity=0.532 Sum_probs=35.9
Q ss_pred CCCceEE-EeccCCCCCCceeecCCCceEEccccccc----------CCCCceecCCCcCC
Q 000213 1705 ARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLL----------SAPEIYICAACKPQ 1754 (1849)
Q Consensus 1705 ~~~~~yC-~C~~~~~~~~mi~Cd~C~~W~H~~Cvg~~----------~~~~~~~C~~C~~~ 1754 (1849)
|...-|| +|. +++..+.||.|..=||..|+... .+.+.|.|+.|...
T Consensus 60 Dg~~d~C~vC~---~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 60 DGMDEQCRWCA---EGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TSCBCSCSSSC---CCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCeecccC---CCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3344566 455 66789999999999999999842 24569999999863
No 143
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=73.71 E-value=5.6 Score=49.66 Aligned_cols=106 Identities=18% Similarity=0.172 Sum_probs=75.8
Q ss_pred cceeeeccccc-cceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhhhh
Q 000213 417 VPWLYLGMLFS-AFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495 (1849)
Q Consensus 417 ~P~lyvGm~fS-~f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~L~ 495 (1849)
.--+|++-.+| .|..|.+++.. +..+-.| .|.|...|+.+... .+|.. ..+++ .+.
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~lp~~--~~~~~--------~~~--- 221 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------ELALT--SSPNF--------SQD--- 221 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------TTCSS--CCCCC--------CGG---
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------cCCCc--ccccC--------Ccc---
Confidence 34589998888 47889999764 4455566 79999999887542 23321 11111 222
Q ss_pred hCCCceeecccCCccEEEEcCCccceeecc--CccceeecccC-CCCchhchh
Q 000213 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNF--GLNCAEAVNFA-PADWLPHGG 545 (1849)
Q Consensus 496 ~~GIpv~~~~Q~pGefVitfP~ayH~g~n~--G~n~~eavNfa-~~~Wl~~g~ 545 (1849)
+.+-|++.++-+|||.+++-||..|.+.+. ++++.-++.+. +.+|.++-.
T Consensus 222 ~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~ 274 (489)
T 4diq_A 222 DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLE 274 (489)
T ss_dssp GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHH
T ss_pred cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHH
Confidence 246789999999999999999999999998 47888887765 467865433
No 144
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=73.60 E-value=1.1 Score=38.37 Aligned_cols=47 Identities=21% Similarity=0.430 Sum_probs=33.7
Q ss_pred CCcccccccCCCCc-cceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKE-LEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~-~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
+...|.+|..+..+ ...+....|++.||..|+....... ..||.|..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-----~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-----YRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-----CCCTTSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-----CcCCCCCC
Confidence 34669999887744 3346667799999999998443322 78999943
No 145
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=73.37 E-value=3.1 Score=38.44 Aligned_cols=49 Identities=24% Similarity=0.384 Sum_probs=35.0
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
.+...|.+|.....+...+.--.|++.||..|+...... ...||.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 61 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ-----HDSCPVCRKS 61 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT-----TCSCTTTCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc-----CCcCcCcCCc
Confidence 445789999888776555444469999999999844322 2589999543
No 146
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.92 E-value=0.93 Score=41.62 Aligned_cols=48 Identities=29% Similarity=0.535 Sum_probs=34.6
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+...|.+|..+..+...+.--.|++.||..|+..-... ...||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~-----~~~CP~Cr~ 60 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV-----RKVCPLCNM 60 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc-----CCcCCCcCc
Confidence 345779999888876655544469999999999844322 238999943
No 147
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=71.56 E-value=1 Score=43.40 Aligned_cols=47 Identities=19% Similarity=0.392 Sum_probs=34.7
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.+...|.+|..+......+..-.|++.||..|+..-... ...||.|.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~-----~~~CP~Cr 84 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK-----SGTCPVCR 84 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT-----TCBCTTTC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc-----CCcCcCcC
Confidence 345789999877766666555669999999999854322 34899994
No 148
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=71.26 E-value=1 Score=46.59 Aligned_cols=49 Identities=14% Similarity=0.473 Sum_probs=36.4
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccc-----cc-cccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEV-----DR-NHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~-----~~-~~~~~~~Cp~C~~ 1500 (1849)
...+|..|. ++.+.+-|+.|-..||..|+.++.. +. .....|.|+.|..
T Consensus 56 ~~~~C~vC~---dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCA---EGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTC---CCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecC---CCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 346799883 3355899999999999999996532 22 2467899999943
No 149
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=69.20 E-value=0.92 Score=45.36 Aligned_cols=51 Identities=22% Similarity=0.496 Sum_probs=34.7
Q ss_pred cccccccCCCCccc---------------eeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1451 TLCMCCESDSKELE---------------FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~---------------~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
..|.+|..+..+.. .+.--.|++.||..|+..-...........||.|...
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 46999987764432 2335679999999999855433222456799999543
No 150
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.53 E-value=1.6 Score=40.79 Aligned_cols=45 Identities=13% Similarity=0.284 Sum_probs=32.3
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
..-.|.+|.....+... ..|++.||..|+..... ....||.|...
T Consensus 14 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 58 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVV---TKCRHYFCESCALEHFR-----ATPRCYICDQP 58 (81)
T ss_dssp CCSBCSSSCSBCCSEEE---CTTSCEEEHHHHHHHHH-----HCSBCSSSCCB
T ss_pred CCCCCcCCCchhcCeeE---ccCCCHhHHHHHHHHHH-----CCCcCCCcCcc
Confidence 44679999877766332 47999999999984432 25689999543
No 151
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.80 E-value=4.2 Score=36.94 Aligned_cols=46 Identities=17% Similarity=0.421 Sum_probs=32.6
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
.+...|.+|.....+...+ .|++.||..|+...... ...||.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 58 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL---PCKHVFCYLCVKGASWL-----GKRCALCRQE 58 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE---TTTEEEEHHHHHHCTTC-----SSBCSSSCCB
T ss_pred CCCCCCccCCcccCCCEEc---cCCCHHHHHHHHHHHHC-----CCcCcCcCch
Confidence 4556799998777664333 59999999999843322 2689999544
No 152
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.61 E-value=3.4 Score=38.92 Aligned_cols=45 Identities=20% Similarity=0.577 Sum_probs=29.3
Q ss_pred CcccccccCCCCc-----------cc-eeeccccccccccccCCCccccccccccccCCccc
Q 000213 1450 MTLCMCCESDSKE-----------LE-FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~-----------~~-~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
...|.+|..+..+ .. .+.-..|++.||..|+..-.... -.||.|.
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~-----~~CP~CR 71 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN-----NRCPLCQ 71 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC-----CBCTTTC
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC-----CCCCCcC
Confidence 3457777776643 22 23334699999999998443322 2899994
No 153
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.41 E-value=2.8 Score=37.88 Aligned_cols=45 Identities=16% Similarity=0.434 Sum_probs=33.1
Q ss_pred CCCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
-.+...|.+|.....+ . -..|++.||..|+..... ....||.|..
T Consensus 12 ~~~~~~C~IC~~~~~~-~---~~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~ 56 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD-L---ILPCAHSFCQKCIDKWSD-----RHRNCPICRL 56 (70)
T ss_dssp CCCCCCCSSSCCSCCS-E---EETTTEEECHHHHHHSSC-----CCSSCHHHHH
T ss_pred CCCCCCCeeCCcCccC-c---ccCCCCcccHHHHHHHHH-----CcCcCCCcCC
Confidence 3455779999888777 2 245899999999984433 4678999943
No 154
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=55.18 E-value=9.1 Score=36.68 Aligned_cols=50 Identities=24% Similarity=0.540 Sum_probs=39.7
Q ss_pred CceEEEeccCCCC------CCceeecCCC-ceEEcccccccCCCCceecCCCcCCCC
Q 000213 1707 SMLYCICRKPYDE------KAMIACYQCD-EWYHIDCVKLLSAPEIYICAACKPQAE 1756 (1849)
Q Consensus 1707 ~~~yC~C~~~~~~------~~mi~Cd~C~-~W~H~~Cvg~~~~~~~~~C~~C~~~~~ 1756 (1849)
++.-|+|.++-+. =.||-|..|. .=-|..|..+....+.|.|..|....+
T Consensus 25 dA~~Clc~~GR~~~~~~~~W~L~lC~~Cgs~gtH~~Cs~l~~~~~~weC~~C~~v~~ 81 (85)
T 1weq_A 25 DAPICLYEQGRDSFEDEGRWRLILCATCGSHGTHRDCSSLRPNSKKWECNECLPASG 81 (85)
T ss_dssp CCSCCCSTTCSSCCBSSSTTBCEECSSSCCCEECSGGGTCCTTCSCCCCTTTSCCSS
T ss_pred CccccCCCCCcccccCCCCEEEEeCcccCCchhHHHHhCCcCCCCCEECCcCccccC
Confidence 3457899543331 2489999998 889999999998899999999997555
No 155
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.82 E-value=5 Score=36.43 Aligned_cols=48 Identities=17% Similarity=0.483 Sum_probs=34.1
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+...|.+|.....+..++ .|++.||..|+..... .......||.|..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~--~~~~~~~CP~Cr~ 65 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGE--TSCGFFKCPLCKT 65 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC---TTCCEEEHHHHHHHCS--SSCSCCCCSSSCC
T ss_pred ccCCEeccCCcccCCeEEc---CCCChhhHHHHHHHHH--cCCCCCCCCCCCC
Confidence 3456799998877764433 7999999999984432 1235678999944
No 156
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=48.65 E-value=7.7 Score=44.22 Aligned_cols=90 Identities=24% Similarity=0.369 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHhhHHHHHHhhhhcccccCCCCchHHHHHHHHhhhccceeeecCCCCCCCCcccccccCCCCccceeecc
Q 000213 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1469 (1849)
Q Consensus 1390 ~e~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~c~~~~~~~~~~~~C~ 1469 (1849)
+|.+.++.+.-. ++|+..- +..+.+ ..-+|++...-++.+... ....|..|..-.. .-..|.
T Consensus 136 ~eae~lL~~lv~-~gWl~~~-~g~~~l--~~R~l~El~~~l~~~~~~------------~i~~C~iC~~iv~--~g~~C~ 197 (238)
T 3nw0_A 136 KEAEQVLQKFVQ-NKWLIEK-EGEFTL--HGRAILEMEQYIRETYPD------------AVKICNICHSLLI--QGQSCE 197 (238)
T ss_dssp HHHHHHHHHHHH-TTSEEEE-TTEEEE--CHHHHHHHHHHHHHHCTT------------TCCBCTTTCSBCS--SCEECS
T ss_pred HHHHHHHHHHHH-hcchhhh-CCEEEe--cCccHHHHHHHHHHhcCC------------CCCcCcchhhHHh--CCcccC
Confidence 344444444331 3677653 222222 224555555555444431 2577998844333 459999
Q ss_pred ccccccccccCCCccccccccccccCCcccc
Q 000213 1470 ACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1470 ~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.|+..||..|+..-. ++-..-.||.|..
T Consensus 198 ~C~~~~H~~C~~~~~---~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 198 TCGIRMHLPCVAKYF---QSNAEPRCPHCND 225 (238)
T ss_dssp SSCCEECHHHHHHHT---TTCSSCBCTTTCC
T ss_pred ccChHHHHHHHHHHH---HhCCCCCCCCCCC
Confidence 999999999997321 2234578999943
No 157
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.30 E-value=7.1 Score=33.59 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=31.5
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C 1498 (1849)
+...|.+|.....+..++ .|++.||..|+...... ......||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVII---ECGHNFCKACITRWWED--LERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTS--SCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHh--cCCCCCCCCC
Confidence 446799998777765443 69999999999843221 1246789987
No 158
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=48.22 E-value=12 Score=32.41 Aligned_cols=42 Identities=26% Similarity=0.636 Sum_probs=31.0
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+.-.|.+|.....+-.++ .|++.|+..|+.. ....||.|..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~--------~~~~CP~Cr~ 45 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA--------SGMQCPICQA 45 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS--------SSSSCSSCCS
T ss_pred ccCCCceEeCCccCCeEEc---CCCCcccHHHHcc--------CCCCCCcCCc
Confidence 3446699998777765444 4899999999983 3568999944
No 159
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.29 E-value=4.7 Score=35.65 Aligned_cols=46 Identities=17% Similarity=0.503 Sum_probs=32.4
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C 1498 (1849)
.+.-.|.+|.....+-..+ .|++.||..|+...... ......||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI---DCGHNFCLKCITQIGET--SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC---TTSSEECHHHHHHHHHH--CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe---CCCCcchHHHHHHHHHc--CCCCCcCcCC
Confidence 3456799998777664333 79999999999844332 2346689987
No 160
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.58 E-value=5.9 Score=37.25 Aligned_cols=52 Identities=19% Similarity=0.381 Sum_probs=35.0
Q ss_pred CCCcccccccCCCCccce-eeccccccccccccCCCccccccccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEF-LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~-~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
.+.-.|.+|.....+... ..--.|++.||..|+....... .....||.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS--INGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC--SSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC--CCCcCCCCCCCc
Confidence 344669999888776332 2223699999999998443322 246899999554
No 161
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.97 E-value=7.4 Score=36.36 Aligned_cols=47 Identities=23% Similarity=0.494 Sum_probs=33.1
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
...|.+|..-+- .-+.|..|+..||..|+.--.... ..=.||.|...
T Consensus 15 i~~C~IC~~~i~--~g~~C~~C~h~fH~~Ci~kWl~~~---~~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLI--QGQSCETCGIRMHLPCVAKYFQSN---AEPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCS--SSEECSSSCCEECHHHHHHHSTTC---SSCCCTTTCSC
T ss_pred CCcCcchhhHcc--cCCccCCCCchhhHHHHHHHHHhc---CCCCCCCCcCc
Confidence 377999966554 347999999999999998333221 12479999543
No 162
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=44.66 E-value=40 Score=41.84 Aligned_cols=105 Identities=15% Similarity=0.167 Sum_probs=68.1
Q ss_pred cccceeeecccccc-ceeEecCCCcceeeeeecCCCeeEEecCCCcHHHHHHHHHhhCCCcccCChhhhhhhccccChhh
Q 000213 415 VMVPWLYLGMLFSA-FCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSV 493 (1849)
Q Consensus 415 v~~P~lyvGm~fS~-f~WH~Ed~~l~SiNy~h~G~~K~WY~VP~~~~~kfe~~~~~~~p~~~~~~pd~l~~~~~~~~P~~ 493 (1849)
.....+|+|-.++. |..|.+++.. +..+..| .|.|...|+.. -+|... . +- .|+
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~----------pl~~~~----s-----~d--~~~- 192 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTV----------PLAREY----S-----VE--AEE- 192 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSS----------TTCSSC----E-----EC--CTT-
T ss_pred CcccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCC----------CccccC----C-----CC--chh-
Confidence 44567899998875 5899986542 3334455 89999999864 112110 0 00 122
Q ss_pred hhhCCCceeecccCCccEEEEcCCccceeeccC---ccceeecc-cCCCCchhchhh
Q 000213 494 LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFG---LNCAEAVN-FAPADWLPHGGF 546 (1849)
Q Consensus 494 L~~~GIpv~~~~Q~pGefVitfP~ayH~g~n~G---~n~~eavN-fa~~~Wl~~g~~ 546 (1849)
+.|-+.+.++=+|||.++.-||.+|.+.+.+ +++.-.+. |...+|.++-..
T Consensus 193 --~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~~ 247 (442)
T 2xdv_A 193 --RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLD 247 (442)
T ss_dssp --TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHHH
T ss_pred --hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHHH
Confidence 2356788999999999999999999999874 23322232 234778766543
No 163
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=44.38 E-value=10 Score=38.31 Aligned_cols=42 Identities=26% Similarity=0.668 Sum_probs=30.4
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.|.+|.....+-.++ .|++.||..|+..... ...+.||.|..
T Consensus 54 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~ 95 (124)
T 3fl2_A 54 QCICCQELVFRPITT---VCQHNVCKDCLDRSFR----AQVFSCPACRY 95 (124)
T ss_dssp BCTTTSSBCSSEEEC---TTSCEEEHHHHHHHHH----TTCCBCTTTCC
T ss_pred CCCcCChHHcCcEEe---eCCCcccHHHHHHHHh----HCcCCCCCCCc
Confidence 488897777654443 7999999999974322 34579999943
No 164
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=43.86 E-value=8.4 Score=37.33 Aligned_cols=42 Identities=24% Similarity=0.387 Sum_probs=29.8
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.|.+|.....+-. ....|++.||..|+..... ....||.|..
T Consensus 24 ~C~IC~~~~~~p~--~~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~ 65 (99)
T 2y43_A 24 RCGICFEYFNIAM--IIPQCSHNYCSLCIRKFLS-----YKTQCPTCCV 65 (99)
T ss_dssp BCTTTCSBCSSEE--ECTTTCCEEEHHHHHHHHT-----TCCBCTTTCC
T ss_pred CcccCChhhCCcC--EECCCCCHhhHHHHHHHHH-----CCCCCCCCCC
Confidence 4999987776633 3357999999999984432 2368999943
No 165
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=41.42 E-value=3.3 Score=37.41 Aligned_cols=47 Identities=26% Similarity=0.658 Sum_probs=33.1
Q ss_pred CCcccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~----~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
+...|.+|.....+. ..+....|++.||..|+...... .-.||.|..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~ 59 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRK 59 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-----CCCCCCCCC
Confidence 346799998776542 44566789999999999844322 248999944
No 166
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.21 E-value=12 Score=36.75 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=30.3
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.|.+|.....+-..+ .|++.||..|+....... .....||.|..
T Consensus 23 ~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~ 66 (112)
T 1jm7_A 23 ECPICLELIKEPVST---KCDHIFCKFCMLKLLNQK--KGPSQCPLCKN 66 (112)
T ss_dssp SCSSSCCCCSSCCBC---TTSCCCCSHHHHHHHHSS--SSSCCCTTTSC
T ss_pred CCcccChhhcCeEEC---CCCCHHHHHHHHHHHHhC--CCCCCCcCCCC
Confidence 499897777654332 699999999998443322 23478999943
No 167
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.87 E-value=8.8 Score=35.58 Aligned_cols=51 Identities=18% Similarity=0.339 Sum_probs=34.8
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccc-cccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR-NHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~-~~~~~~~Cp~C~~~ 1501 (1849)
.+.-.|.+|.....+-.++ .|++.||..|+....... .......||.|...
T Consensus 17 ~~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred cCCCCCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 3446799998887664433 699999999998433221 12336899999544
No 168
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.86 E-value=4.6 Score=36.02 Aligned_cols=47 Identities=26% Similarity=0.665 Sum_probs=33.2
Q ss_pred CCCcccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1448 VSMTLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~----~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.+...|.+|.....+. ..+.-..|++.||..|+...... ...||.|.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr 63 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCR 63 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-----CSSCTTTC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-----CCCCCCCC
Confidence 3456799998876653 33455689999999999844332 34899994
No 169
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=39.92 E-value=7.2 Score=34.84 Aligned_cols=45 Identities=18% Similarity=0.474 Sum_probs=31.4
Q ss_pred CcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1450 ~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
...|.+|.....+.. ....|++.||..|+..... ....||.|...
T Consensus 5 ~~~C~IC~~~~~~~~--~~~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~~ 49 (68)
T 1chc_A 5 AERCPICLEDPSNYS--MALPCLHAFCYVCITRWIR-----QNPTCPLCKVP 49 (68)
T ss_dssp CCCCSSCCSCCCSCE--EETTTTEEESTTHHHHHHH-----HSCSTTTTCCC
T ss_pred CCCCeeCCccccCCc--EecCCCCeeHHHHHHHHHh-----CcCcCcCCChh
Confidence 456999988776532 3446999999999984332 23589999543
No 170
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=39.58 E-value=6.1 Score=40.92 Aligned_cols=39 Identities=23% Similarity=0.535 Sum_probs=27.9
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C 1498 (1849)
.|.+|.....+..++ .||+.||..|+.--.. ..-.||.|
T Consensus 55 ~C~iC~~~~~~~~~~---~CgH~fc~~Ci~~~~~-----~~~~CP~C 93 (138)
T 4ayc_A 55 QCIICSEYFIEAVTL---NCAHSFCSYCINEWMK-----RKIECPIC 93 (138)
T ss_dssp BCTTTCSBCSSEEEE---TTSCEEEHHHHHHHTT-----TCSBCTTT
T ss_pred CCcccCcccCCceEC---CCCCCccHHHHHHHHH-----cCCcCCCC
Confidence 399998777664443 5899999999873222 23569999
No 171
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=39.38 E-value=3.5 Score=36.23 Aligned_cols=45 Identities=27% Similarity=0.688 Sum_probs=31.5
Q ss_pred cccccccCCCCcc----ceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1451 TLCMCCESDSKEL----EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~----~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
..|.+|.....+. ..+....|++.||..|+...... ...||.|..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~ 52 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRK 52 (64)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-----CSBCTTTCC
T ss_pred CCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-----CCCCCCCCc
Confidence 4588887766542 34456689999999999844332 458999943
No 172
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=38.52 E-value=9.8 Score=35.23 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=34.1
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccc-cccccccCCccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR-NHAEAYICPYCQYF 1501 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~-~~~~~~~Cp~C~~~ 1501 (1849)
+.-.|.+|.....+...+ .|++.||..|+....... .......||.|...
T Consensus 18 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSA---DCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TTTSCTTTCSCCSSCEEC---TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred cCCCCcCCChhhCcceeC---CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 446799998877664433 499999999998433221 12347899999544
No 173
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=38.29 E-value=10 Score=37.79 Aligned_cols=43 Identities=23% Similarity=0.520 Sum_probs=31.0
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
-.|.+|.....+-.++ .|++.||..|+...... ....||.|..
T Consensus 16 ~~C~iC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~ 58 (115)
T 3l11_A 16 CQCGICMEILVEPVTL---PCNHTLCKPCFQSTVEK----ASLCCPFCRR 58 (115)
T ss_dssp HBCTTTCSBCSSCEEC---TTSCEECHHHHCCCCCT----TTSBCTTTCC
T ss_pred CCCccCCcccCceeEc---CCCCHHhHHHHHHHHhH----CcCCCCCCCc
Confidence 4599997776654434 79999999999855332 2478999933
No 174
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=37.79 E-value=6.3 Score=38.50 Aligned_cols=44 Identities=20% Similarity=0.610 Sum_probs=32.0
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
-.|.+|.....+ -+.|..|++.||..|+..-.... ...||.|..
T Consensus 23 ~~C~IC~~~~~~--p~~~~~CgH~FC~~Ci~~~~~~~----~~~CP~Cr~ 66 (100)
T 3lrq_A 23 FRCFICMEKLRD--ARLCPHCSKLCCFSCIRRWLTEQ----RAQCPHCRA 66 (100)
T ss_dssp TBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHHHT----CSBCTTTCC
T ss_pred CCCccCCccccC--ccccCCCCChhhHHHHHHHHHHC----cCCCCCCCC
Confidence 349999776654 56778999999999998443322 178999943
No 175
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=36.53 E-value=7.2 Score=41.55 Aligned_cols=43 Identities=19% Similarity=0.474 Sum_probs=32.0
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
-.|.+|.....+ -+.+..|++.||..|+...... ....||.|.
T Consensus 55 ~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr 97 (165)
T 2ckl_B 55 LMCPICLDMLKN--TMTTKECLHRFCADCIITALRS----GNKECPTCR 97 (165)
T ss_dssp HBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHHT----TCCBCTTTC
T ss_pred CCCcccChHhhC--cCEeCCCCChhHHHHHHHHHHh----CcCCCCCCC
Confidence 469999777765 4555689999999999844331 257899994
No 176
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=36.36 E-value=13 Score=34.01 Aligned_cols=50 Identities=18% Similarity=0.333 Sum_probs=34.1
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccc--cccccccCCccccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR--NHAEAYICPYCQYF 1501 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~--~~~~~~~Cp~C~~~ 1501 (1849)
+.-.|.+|.....+-.++ .|++.||..|+....... .......||.|...
T Consensus 11 ~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred cCCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 345699998777664333 699999999999543332 12346799999544
No 177
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=36.27 E-value=8.7 Score=39.04 Aligned_cols=44 Identities=18% Similarity=0.522 Sum_probs=0.0
Q ss_pred cccccccCCCCccc---------------eeeccccccccccccCCCccccccccccccCCccc
Q 000213 1451 TLCMCCESDSKELE---------------FLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~---------------~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
..|++|..++.+.- .+.--.|++.||..|+..-+.. .-.||.|.
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-----~~~CP~Cr 107 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-----RQVCPLDN 107 (117)
T ss_dssp ----------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-----CCcCCCCC
Confidence 56998877765421 1222369999999999854333 34799993
No 178
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=35.43 E-value=29 Score=29.63 Aligned_cols=39 Identities=18% Similarity=0.497 Sum_probs=27.8
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
.|...|..+| .+.|..||..|+ ++ .....+..|..||.|
T Consensus 13 ~L~~~v~~~G-------~~~W~~Ia~~~~-~R-----t~~qcr~Rw~~~L~P 51 (52)
T 1gvd_A 13 RLIKLVQKYG-------PKRWSVIAKHLK-GR-----IGKQCRERWHNHLNP 51 (52)
T ss_dssp HHHHHHHHHC-------TTCHHHHHTTST-TC-----CHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHC-------cChHHHHHHHcC-CC-----CHHHHHHHHHHHcCc
Confidence 3566677766 257999999883 22 234789999999876
No 179
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=35.24 E-value=10 Score=37.76 Aligned_cols=45 Identities=18% Similarity=0.497 Sum_probs=30.1
Q ss_pred cccccccCCCCcc---------------ceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1451 TLCMCCESDSKEL---------------EFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~---------------~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
..|++|...+.+. ..+.-..|++.||..|+..-+.. .-.||.|..
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-----~~~CP~Cr~ 97 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-----RQVCPLDNR 97 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT-----CSBCSSSCS
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc-----CCcCcCCCC
Confidence 4588887665542 12333579999999999844332 467999943
No 180
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=35.05 E-value=12 Score=35.21 Aligned_cols=48 Identities=21% Similarity=0.490 Sum_probs=33.4
Q ss_pred CCcccccccCCCC--ccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1449 SMTLCMCCESDSK--ELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~--~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
+...|-+|..+.. +..+.-| .||+-|+..|+..... ...+.||.|...
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~----~~~~~CP~CR~~ 59 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT----DENGLCPACRKP 59 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT----SSCSBCTTTCCB
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh----cCCCCCCCCCCc
Confidence 4456999988773 3344445 7999999999874322 146899999554
No 181
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.90 E-value=12 Score=34.10 Aligned_cols=47 Identities=17% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCccccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYF 1501 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~ 1501 (1849)
.+.-.|.+|.....+- +.-..|++.||..|+...... ...||.|...
T Consensus 13 ~~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (72)
T 2djb_A 13 TPYILCSICKGYLIDA--TTITECLHTFCKSCIVRHFYY-----SNRCPKCNIV 59 (72)
T ss_dssp CGGGSCTTTSSCCSSC--EECSSSCCEECHHHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCCCCCChHHHCc--CEECCCCCHHHHHHHHHHHHc-----CCcCCCcCcc
Confidence 4456799998777663 333579999999999844322 4689999543
No 182
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=33.84 E-value=9 Score=36.48 Aligned_cols=48 Identities=21% Similarity=0.621 Sum_probs=32.2
Q ss_pred CCCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+.-.|.+|.....+-.++ ..|++.|+..|+..... ......||.|..
T Consensus 11 ~~~~~C~IC~~~~~~p~~~--~~CgH~fC~~Ci~~~~~---~~~~~~CP~Cr~ 58 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVI--PCCGNSYCDECIRTALL---ESDEHTCPTCHQ 58 (92)
T ss_dssp CTTTEETTTTEECSSCEEC--TTTCCEECHHHHHHHHH---HCTTCCCTTTCC
T ss_pred CcCCCCCCCChhhcCceEC--CCCCCHHHHHHHHHHHH---hcCCCcCcCCCC
Confidence 3446799997766654333 33999999999983322 123479999943
No 183
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.62 E-value=12 Score=35.20 Aligned_cols=50 Identities=20% Similarity=0.577 Sum_probs=31.4
Q ss_pred CCCcccccccCCCCcc-ceee---ccccccccccccCCCccccccccccccCCcccc
Q 000213 1448 VSMTLCMCCESDSKEL-EFLI---CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1448 ~~~~~C~c~~~~~~~~-~~~~---C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.+...|.+|..+..+. .++. |.-..++||..|+..=.... ....||.|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~---~~~~CplCr~ 66 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS---DTRCCELCKY 66 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH---CCSBCSSSCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC---CCCCCCCCCC
Confidence 3457899998766433 3431 22224999999998443322 2468999943
No 184
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=33.33 E-value=7.5 Score=41.42 Aligned_cols=52 Identities=25% Similarity=0.714 Sum_probs=38.8
Q ss_pred chhhhhhhcccCCCCCCceeccc--ccCCccccccCC----CC-CCC-CCCCCCcccccccCC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLS----PP-LKH-VPRGNWYCLECLNSD 297 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~----PP-L~~-vP~gdW~C~~C~~~~ 297 (1849)
|..+..|..|+.|. .+++|| .|.+.|=..|+. |- +.. +....|.|.-|...+
T Consensus 76 DG~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 76 DGYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TSSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 44466899999774 699999 899999999964 21 232 445789999998754
No 185
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.45 E-value=10 Score=33.70 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=32.1
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
+.-.|.+|.....+... -.|++.||..|+..... .....||.|..
T Consensus 14 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~ 58 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ---TECGHRFCESCMAALLS----SSSPKCTACQE 58 (66)
T ss_dssp CCEECTTTCCEESSCCC---CSSSCCCCHHHHHHHHT----TSSCCCTTTCC
T ss_pred cCCCCCCCChHhcCeeE---CCCCCHHHHHHHHHHHH----hCcCCCCCCCc
Confidence 44669999777665443 38999999999984432 34568999943
No 186
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.16 E-value=50 Score=30.77 Aligned_cols=29 Identities=24% Similarity=0.709 Sum_probs=25.3
Q ss_pred ccccccccccccccceecccCCCceeeccch
Q 000213 625 DPTCIICRQYLYLSAVACRCRPAAFVCLEHW 655 (1849)
Q Consensus 625 ~~~C~~C~~~~fls~v~c~~~~~~~~CL~h~ 655 (1849)
...|..|+.-+-|..+.|.|. .++|..|-
T Consensus 25 ~~RC~~C~kkvgL~~f~CrCg--~~FCs~HR 53 (74)
T 1wfp_A 25 ATRCLSCNKKVGVTGFKCRCG--STFCGTHR 53 (74)
T ss_dssp CCBCSSSCCBCTTTCEECTTS--CEECTTTC
T ss_pred CccchhhcCcccccceEeccC--CEeccccC
Confidence 468999999999989999884 79999994
No 187
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=31.14 E-value=41 Score=28.66 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=27.6
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
.|...|..+|. ..|..||..|. ++ .....+..|.+||.|
T Consensus 13 ~L~~~v~~~G~-------~~W~~Ia~~~~-~R-----t~~qcr~Rw~~~L~P 51 (52)
T 1guu_A 13 KLKKLVEQNGT-------DDWKVIANYLP-NR-----TDVQCQHRWQKVLNP 51 (52)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHTST-TC-----CHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCC-------CCHHHHHHHcC-CC-----CHHHHHHHHHHHcCc
Confidence 35666776653 47999999984 12 234789999999865
No 188
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=30.18 E-value=16 Score=33.47 Aligned_cols=47 Identities=21% Similarity=0.647 Sum_probs=32.4
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
+.-.|.+|.....+-. .-..|++.||..|+....... ....||.|..
T Consensus 14 ~~~~C~IC~~~~~~p~--~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTDAV--VIPCCGNSYCDECIRTALLES---DEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTTCE--ECSSSCCEECTTHHHHHHHHS---SSSCCSSSCC
T ss_pred CCCCCcCCChHHhCCe--EcCCCCCHHHHHHHHHHHHhc---CCCcCCCCCC
Confidence 4467999977776533 333499999999998443321 2578999955
No 189
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=29.05 E-value=9.9 Score=33.89 Aligned_cols=50 Identities=18% Similarity=0.426 Sum_probs=31.6
Q ss_pred CCCCcccccccCCCCccceee--ccccccccccccCCCccccccccccccCCccc
Q 000213 1447 SVSMTLCMCCESDSKELEFLI--CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1447 ~~~~~~C~c~~~~~~~~~~~~--C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.++...|.+|....++.-..- |.....++|.+|+.-=... ..+..||.|.
T Consensus 3 ~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~---~~~~~C~~C~ 54 (60)
T 1vyx_A 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI---SRNTACQICG 54 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH---HTCSBCTTTC
T ss_pred CCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh---CCCCccCCCC
Confidence 345678998876654432334 4444569999999833322 1257899994
No 190
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.01 E-value=26 Score=34.97 Aligned_cols=39 Identities=23% Similarity=0.514 Sum_probs=28.4
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~ 1499 (1849)
.|.+|.....+-.++ ..|++.|+..|+..... ..||.|.
T Consensus 24 ~C~IC~~~~~~pv~~--~~CgH~fC~~Ci~~~~~-------~~CP~Cr 62 (117)
T 1jm7_B 24 RCSRCTNILREPVCL--GGCEHIFCSNCVSDCIG-------TGCPVCY 62 (117)
T ss_dssp SCSSSCSCCSSCBCC--CSSSCCBCTTTGGGGTT-------TBCSSSC
T ss_pred CCCCCChHhhCccEe--CCCCCHHHHHHHHHHhc-------CCCcCCC
Confidence 488887777654333 26899999999984432 7899993
No 191
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=27.69 E-value=47 Score=30.14 Aligned_cols=40 Identities=15% Similarity=0.312 Sum_probs=28.6
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcC-CCccchhhHHHHHHHHHHhhhc
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRS-NRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~-~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
.|...|..+|. +.|..|+..|++ .++ ...++..|..||.|
T Consensus 20 ~L~~~v~~~G~-------~~W~~Ia~~~~~~~Rt-----~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 20 NLRSGVRKYGE-------GNWSKILLHYKFNNRT-----SVMLKDRWRTMKKL 60 (69)
T ss_dssp HHHHHHHHHCS-------SCHHHHHHHSCCSSCC-----HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCC-------CcHHHHHHHcCcCCCC-----HHHHHHHHHHHcCC
Confidence 46677777762 479999999975 332 34788888888754
No 192
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.30 E-value=51 Score=30.00 Aligned_cols=39 Identities=15% Similarity=0.386 Sum_probs=27.8
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
.|...|..+| .+.|..||..|+ .++ ....+..|..||.|
T Consensus 19 ~L~~~v~~~G-------~~~W~~Ia~~l~-~Rt-----~~qcr~Rw~~~L~p 57 (70)
T 2dim_A 19 ILKAAVMKYG-------KNQWSRIASLLH-RKS-----AKQCKARWYEWLDP 57 (70)
T ss_dssp HHHHHHHHTC-------SSCHHHHHHHST-TCC-----HHHHHHHHHHTSCS
T ss_pred HHHHHHHHHC-------cCCHHHHHHHhc-CCC-----HHHHHHHHHHHcCC
Confidence 4667777776 257999999985 232 34688888888854
No 193
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=27.01 E-value=7.6 Score=47.00 Aligned_cols=52 Identities=31% Similarity=0.776 Sum_probs=38.1
Q ss_pred chhhhhhhcccCCCCCCceeccc--ccCCccccccCCCCC-----CCC-CCCCCcccccccCC
Q 000213 243 DELDQICEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPL-----KHV-PRGNWYCLECLNSD 297 (1849)
Q Consensus 243 ~~~~~~C~~C~~~~~~~~lLlCD--~Cd~~yH~~CL~PPL-----~~v-P~gdW~C~~C~~~~ 297 (1849)
|..+..|..|+.|. .+++|| .|.+.|-..|+.--+ ..+ ....|.|.-|...+
T Consensus 90 DG~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 90 DGYQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 44466899999774 599999 999999999965222 222 23689999998754
No 194
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=26.55 E-value=58 Score=31.17 Aligned_cols=29 Identities=28% Similarity=0.697 Sum_probs=24.8
Q ss_pred cccccccccccccc-ceecccCCCceeeccch
Q 000213 625 DPTCIICRQYLYLS-AVACRCRPAAFVCLEHW 655 (1849)
Q Consensus 625 ~~~C~~C~~~~fls-~v~c~~~~~~~~CL~h~ 655 (1849)
...|..|+.-+-|. .+.|.|. .++|..|-
T Consensus 25 ~~rC~~C~kkvgl~~~f~CrCg--~~FC~~HR 54 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECRCG--NNFCASHR 54 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTC--CEECTTTC
T ss_pred CccchhhCCeecccCCeEcCCC--CEecccCC
Confidence 35899999999885 8999984 79999994
No 195
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=26.08 E-value=65 Score=28.44 Aligned_cols=38 Identities=18% Similarity=0.278 Sum_probs=27.3
Q ss_pred HHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000213 135 LFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 135 L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
|..+|..+|- +.|..||..|+- ++ ....+.+|.+||.+
T Consensus 19 L~~~v~~~G~-------~~W~~Ia~~~~~-Rt-----~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 19 LLEAVMDCGF-------GNWQDVANQMCT-KT-----KEECEKHYMKYFSG 56 (60)
T ss_dssp HHHHHHHTCT-------TCHHHHHHHHTT-SC-----HHHHHHHHHHHTTC
T ss_pred HHHHHHHHCc-------CcHHHHHHHhCC-CC-----HHHHHHHHHHHccC
Confidence 5566777762 479999999941 22 34789999998853
No 196
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=25.94 E-value=14 Score=36.26 Aligned_cols=43 Identities=16% Similarity=0.439 Sum_probs=30.8
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
-.|.+|.....+ -+....|++.||..|+...... ...||.|..
T Consensus 16 ~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~ 58 (108)
T 2ckl_A 16 LMCVLCGGYFID--ATTIIECLHSFCKTCIVRYLET-----SKYCPICDV 58 (108)
T ss_dssp TBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHTS-----CSBCTTTCC
T ss_pred CCCccCChHHhC--cCEeCCCCChhhHHHHHHHHHh-----CCcCcCCCc
Confidence 459999777665 3444689999999999843322 278999943
No 197
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=25.83 E-value=4.4e+02 Score=25.19 Aligned_cols=41 Identities=7% Similarity=0.159 Sum_probs=29.5
Q ss_pred chHHHHHHHhhhHHHHHHHHHhhccCCCcccHHHHHHHHHH
Q 000213 872 SEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESE 912 (1849)
Q Consensus 872 l~~L~~rle~ak~Wl~kvr~~L~~~~~~~~tLd~Lr~Ll~E 912 (1849)
+.+....++....|+.++...|....+...+++.++.++.+
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~ 44 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHT 44 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 34555666666789999988776545555688999888854
No 198
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=25.25 E-value=61 Score=28.48 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=27.8
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhhc
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLYD 185 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~p 185 (1849)
.|...|..+|. +.|..||..|. .++ ....+..|..||.|
T Consensus 18 ~L~~~v~~~G~-------~~W~~Ia~~~~-~Rt-----~~qcr~Rw~~~l~p 56 (60)
T 2d9a_A 18 QLRALVRQFGQ-------QDWKFLASHFP-NRT-----DQQCQYRWLRVLSG 56 (60)
T ss_dssp HHHHHHHHTCT-------TCHHHHHHHCS-SSC-----HHHHHHHHHHTSCS
T ss_pred HHHHHHHHhCC-------CCHHHHHHHcc-CCC-----HHHHHHHHHHHcCC
Confidence 35667777762 57999999984 122 34789999998865
No 199
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=24.98 E-value=17 Score=34.91 Aligned_cols=51 Identities=18% Similarity=0.380 Sum_probs=37.8
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCcccc--ccc-cccccCCc--cc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVD--RNH-AEAYICPY--CQ 1499 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~--~~~-~~~~~Cp~--C~ 1499 (1849)
+.-.|.+|..+..+..|+.-..|++.|...|+.--... ..+ .....||. |.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~ 59 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACP 59 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCS
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCC
Confidence 34569999999988888887789999999998833221 112 24679999 94
No 200
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=24.94 E-value=4.6e+02 Score=25.10 Aligned_cols=41 Identities=5% Similarity=0.071 Sum_probs=31.3
Q ss_pred chHHHHHHHhhhHHHHHHHHHhhccCCCcccHHHHHHHHHH
Q 000213 872 SEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESE 912 (1849)
Q Consensus 872 l~~L~~rle~ak~Wl~kvr~~L~~~~~~~~tLd~Lr~Ll~E 912 (1849)
+...+..++..-.|++++...|....+...+++.++.++.+
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~ 44 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFAT 44 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 45566667777789999988887655666789999998855
No 201
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.71 E-value=31 Score=31.30 Aligned_cols=28 Identities=32% Similarity=0.820 Sum_probs=24.7
Q ss_pred cccccccccccccceecccCCCceeeccch
Q 000213 626 PTCIICRQYLYLSAVACRCRPAAFVCLEHW 655 (1849)
Q Consensus 626 ~~C~~C~~~~fls~v~c~~~~~~~~CL~h~ 655 (1849)
..|..|+.-+-|..+.|.|. .++|..|-
T Consensus 16 ~rC~~C~kkvgl~~f~CrCg--~~FC~~HR 43 (64)
T 1wfh_A 16 NRCTVCRKRVGLTGFMCRCG--TTFCGSHR 43 (64)
T ss_dssp CCCTTTCCCCCTTCEECSSS--CEECTTTC
T ss_pred CcChhhCCccCccCEEeecC--CEeccccC
Confidence 58999999988889999884 79999993
No 202
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=24.34 E-value=20 Score=35.65 Aligned_cols=69 Identities=19% Similarity=0.351 Sum_probs=43.3
Q ss_pred cccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccccccccccccCCCCcccCCCCCchHHHHHhh
Q 000213 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530 (1849)
Q Consensus 1451 ~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~l~ 1530 (1849)
-.|.+|.....+-.. -.|++.||..|+....... ...||.|...-.. ..-++++..+..++
T Consensus 24 ~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~~~~------------~~~~~~~~~l~~~i 84 (116)
T 1rmd_A 24 ISCQICEHILADPVE---TSCKHLFCRICILRCLKVM----GSYCPSCRYPCFP------------TDLESPVKSFLNIL 84 (116)
T ss_dssp TBCTTTCSBCSSEEE---CTTSCEEEHHHHHHHHHHT----CSBCTTTCCBCCG------------GGCBCCCHHHHHHH
T ss_pred CCCCCCCcHhcCcEE---cCCCCcccHHHHHHHHhHC----cCcCCCCCCCCCH------------hhccccHHHHHHHH
Confidence 359999777655333 3799999999998443321 3579999443211 11134566677777
Q ss_pred hccchhcc
Q 000213 1531 SDSEFFCR 1538 (1849)
Q Consensus 1531 s~~~~~~~ 1538 (1849)
...+-.|.
T Consensus 85 ~~l~v~C~ 92 (116)
T 1rmd_A 85 NSLMVKCP 92 (116)
T ss_dssp HHCEEECC
T ss_pred HHhcCCCC
Confidence 76666654
No 203
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=22.35 E-value=36 Score=30.87 Aligned_cols=28 Identities=21% Similarity=0.650 Sum_probs=24.5
Q ss_pred cccccccccccccceecccCCCceeeccch
Q 000213 626 PTCIICRQYLYLSAVACRCRPAAFVCLEHW 655 (1849)
Q Consensus 626 ~~C~~C~~~~fls~v~c~~~~~~~~CL~h~ 655 (1849)
..|..|+.-+-|..+.|.|. .++|..|-
T Consensus 16 ~rC~~C~kkvgl~~f~CrCg--~~FC~~HR 43 (64)
T 1wg2_A 16 NRCFSCNKKVGVMGFKCKCG--STFCGSHR 43 (64)
T ss_dssp CSCTTTCCCCTTSCEECTTS--CEECSSSC
T ss_pred CcChhhCCcccccCeEeecC--CEecccCC
Confidence 58999999988889999884 79999994
No 204
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=21.67 E-value=17 Score=38.35 Aligned_cols=42 Identities=21% Similarity=0.621 Sum_probs=30.0
Q ss_pred ccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1452 ~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
.|.+|.....+-.. -.|++.|+..|+...... ....||.|..
T Consensus 80 ~C~IC~~~~~~pv~---~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~ 121 (150)
T 1z6u_A 80 MCVCCQELVYQPVT---TECFHNVCKDCLQRSFKA----QVFSCPACRH 121 (150)
T ss_dssp BCTTTSSBCSSEEE---CTTSCEEEHHHHHHHHHT----TCCBCTTTCC
T ss_pred EeecCChhhcCCEE---cCCCCchhHHHHHHHHHh----CCCcCCCCCc
Confidence 39989777665433 379999999999844332 4568999943
No 205
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=21.05 E-value=88 Score=27.43 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=28.3
Q ss_pred HHHHHHhhcCChHhhhcccchHHHHhHhcCCCccchhhHHHHHHHHHHhhh
Q 000213 134 KLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYYKHLY 184 (1849)
Q Consensus 134 ~L~~~V~~~GG~~~V~~~kkW~~Va~~l~~~~~~~s~~~~~Lk~~Y~kyL~ 184 (1849)
.|..+|..+|- +.|..||..|+..++ ....+.+|.+|+.
T Consensus 19 ~L~~~v~~~G~-------~~W~~IA~~~~~~Rt-----~~qcr~r~~~~~~ 57 (58)
T 2elk_A 19 LLIDACETLGL-------GNWADIADYVGNART-----KEECRDHYLKTYI 57 (58)
T ss_dssp HHHHHHHHTTT-------TCHHHHHHHHCSSCC-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHCc-------CCHHHHHHHHCCCCC-----HHHHHHHHHHHcc
Confidence 46777888762 479999999974443 3467888888764
No 206
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=20.94 E-value=30 Score=33.27 Aligned_cols=34 Identities=29% Similarity=0.613 Sum_probs=24.2
Q ss_pred cCCCce-EEEeccCCCCCCceeec--CCCceEEccccc
Q 000213 1704 RARSML-YCICRKPYDEKAMIACY--QCDEWYHIDCVK 1738 (1849)
Q Consensus 1704 ~~~~~~-yC~C~~~~~~~~mi~Cd--~C~~W~H~~Cvg 1738 (1849)
+++-.+ .++|++.. .|.-|+|. .|...||..|.-
T Consensus 13 ~~R~~l~C~iC~~~~-~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 13 PARWKLTCYLCKQKG-VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCCCBTTTTBCC-SSCEEECSCTTTCCEEEHHHHH
T ss_pred hHHhcCCCcCCCCCC-CcEeEecCCCCCCCcCcHHHHH
Confidence 344444 45897543 25799998 599999999953
No 207
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=20.13 E-value=33 Score=31.40 Aligned_cols=45 Identities=13% Similarity=0.101 Sum_probs=31.5
Q ss_pred CCcccccccCCCCccceeeccccccccccccCCCccccccccccccCCcccc
Q 000213 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500 (1849)
Q Consensus 1449 ~~~~C~c~~~~~~~~~~~~C~~C~d~yH~~Cv~~~~~~~~~~~~~~Cp~C~~ 1500 (1849)
+.-.|.+|.....+-..+ .|++.|+..|+...... ....||.|..
T Consensus 7 ~~~~C~IC~~~~~~Pv~~---~CgH~fc~~Ci~~~~~~----~~~~CP~C~~ 51 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV---STGQTYERSSIQKWLDA----GHKTCPKSQE 51 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE---TTTEEEEHHHHHHHHTT----TCCBCTTTCC
T ss_pred ccCCCCCccccccCCEEc---CCCCeecHHHHHHHHHH----CcCCCCCCcC
Confidence 345699997777653332 69999999999844321 2678999943
No 208
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=20.13 E-value=39 Score=26.59 Aligned_cols=14 Identities=29% Similarity=0.919 Sum_probs=10.9
Q ss_pred CCCCCcccccccCC
Q 000213 284 PRGNWYCLECLNSD 297 (1849)
Q Consensus 284 P~gdW~C~~C~~~~ 297 (1849)
.+|||.|+.|-+.+
T Consensus 3 ~~gDW~C~~C~~~N 16 (33)
T 2k1p_A 3 SANDWQCKTCSNVN 16 (33)
T ss_dssp SSSSCBCSSSCCBC
T ss_pred CCCCcccCCCCCcc
Confidence 46999999996543
Done!