Your job contains 1 sequence.
>000215
MGKGRTSAVLGQKLSVASTSKSASLSVPSGPVYYPTEDEFKDPLEYICKIRAEAERYGIC
KIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLN
KKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKISDCARHVLCQLYY
KHLYDYEKYYNKLNKEVTKGCKRGLDGDVKSEDKVERSSSKRRRRNNCDQERVKVCHKVD
KEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS
FGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLD
TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL
YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD
LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW
LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWRERL
WRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCE
CKTRKLHLLYRHTLAELYDLFLTVDRNSSEETSESNNLRRQISSSNRPTTLTKKVKGVRV
TMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWA
EGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ
EINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAA
IEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQEL
GDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQ
VDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAA
AMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLA
SAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDAR
CLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKA
LSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCK
LSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKE
LGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYI
YNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY
FESESVSQFGGSPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTCL
TDIVKFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLL
EGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLD
KVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLL
SAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQK
MLAIANNSSVFDCSSGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIYTQQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000215
(1849 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 2652 0. 3
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 923 3.3e-124 3
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 923 3.3e-124 3
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 936 3.7e-122 5
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 928 3.8e-122 4
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 927 5.3e-122 5
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 926 1.1e-120 5
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 924 1.8e-120 5
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 923 1.9e-120 5
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 935 2.3e-120 5
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 926 5.6e-120 4
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 942 5.8e-120 4
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 926 9.7e-120 4
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 933 1.6e-119 5
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 910 4.4e-119 4
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 920 8.2e-119 5
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 943 4.3e-118 5
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 934 6.1e-118 4
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 915 6.3e-118 5
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 942 7.5e-118 4
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 942 9.0e-118 4
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 932 3.1e-117 5
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 938 5.0e-117 4
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 920 5.0e-116 6
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 920 1.1e-115 3
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 916 2.2e-114 4
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 971 2.7e-113 3
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 971 4.4e-113 3
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 964 1.5e-112 3
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 964 1.5e-112 3
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 961 2.4e-112 4
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 960 3.3e-112 4
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 856 6.8e-112 6
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 856 6.8e-112 6
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 957 3.7e-111 4
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 936 3.2e-110 5
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 933 4.7e-110 4
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 960 4.9e-109 5
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 956 1.6e-108 5
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 935 6.0e-106 3
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 828 7.1e-106 5
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 921 2.2e-104 4
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 758 1.2e-102 5
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 814 5.8e-97 3
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 815 9.4e-93 3
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 781 7.7e-92 3
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 734 3.4e-90 4
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 702 7.0e-88 3
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 754 1.4e-87 2
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 686 9.5e-86 3
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 706 1.1e-81 3
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 776 4.4e-81 2
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 661 9.5e-76 2
TAIR|locus:2064910 - symbol:AT2G38950 species:3702 "Arabi... 520 5.8e-61 3
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 373 8.7e-44 2
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 359 3.5e-43 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 360 7.1e-43 2
UNIPROTKB|Q92833 - symbol:JARID2 "Protein Jumonji" specie... 356 7.5e-43 2
UNIPROTKB|F1MH56 - symbol:JARID2 "Uncharacterized protein... 357 7.5e-43 2
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 355 7.6e-43 2
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 355 7.8e-43 2
POMBASE|SPBP19A11.06 - symbol:lid2 "Lid2 complex subunit,... 389 1.9e-42 5
UNIPROTKB|F1NWZ0 - symbol:JARID2 "Protein Jumonji" specie... 346 2.2e-41 2
UNIPROTKB|Q5F363 - symbol:JARID2 "Protein Jumonji" specie... 346 2.3e-41 2
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 361 3.3e-39 2
ZFIN|ZDB-GENE-061218-1 - symbol:jarid2a "jumonji, AT rich... 346 3.9e-39 2
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 398 3.6e-38 3
UNIPROTKB|C9JGA3 - symbol:KDM5D "Lysine-specific demethyl... 261 7.8e-37 2
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 356 8.2e-36 3
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 361 2.3e-35 2
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 345 4.5e-34 4
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 347 5.9e-34 3
POMBASE|SPAC343.11c - symbol:msc1 "multi-copy suppressor ... 281 5.9e-34 5
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 341 1.1e-32 3
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 346 2.3e-32 4
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 337 2.8e-31 4
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 337 4.0e-31 5
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 344 4.2e-31 4
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 337 4.5e-31 4
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 337 7.4e-31 4
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 335 8.2e-31 5
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 342 8.2e-31 4
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 335 1.3e-30 6
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 332 1.9e-30 4
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 335 2.1e-30 6
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 337 3.8e-30 4
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 332 5.1e-30 5
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 327 5.5e-30 4
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 327 6.7e-30 4
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 336 6.7e-30 7
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 337 1.6e-29 4
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 327 2.5e-29 5
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 334 3.3e-29 4
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 334 3.3e-29 4
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 329 6.3e-29 3
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 335 1.0e-28 5
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 320 5.2e-28 3
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 324 4.2e-27 4
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 315 1.8e-25 3
CGD|CAL0004229 - symbol:orf19.2743 species:5476 "Candida ... 306 6.0e-25 3
WARNING: Descriptions of 233 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 2652 (938.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 509/974 (52%), Positives = 699/974 (71%)
Query: 354 MYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNIT 413
MYG+DLDTS+YGSGFPR+ D RPESV+A++W+EYC SPWNLNN+PKLKGS+L+ + HNI
Sbjct: 1 MYGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNIN 60
Query: 414 GVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPD 473
GV VPWLYLGMLFS+FCWHFEDHCFYS+NY HWG+ KCWY +PGS A AFEKVMR +LPD
Sbjct: 61 GVTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPD 120
Query: 474 LFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAV 533
LFDAQPDLLFQLVTML+P+VL EN VPVY+VLQEPGNFVITFP+S+HAGFNFGLNCAEAV
Sbjct: 121 LFDAQPDLLFQLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCAEAV 180
Query: 534 NFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDL-DSKVSPYLKRELLRVYTK 592
NFA ADWLP+GG GA+LY+ Y K +V+SHEELLCVVAK + +++ S +LK+ELLR+Y+K
Sbjct: 181 NFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIHLKKELLRIYSK 240
Query: 593 ERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCL 652
E+ WRE+LW+ GI++S+PM +C + VG EEDPTCIIC+Q+L+LSA+ C CRP+ F CL
Sbjct: 241 EKTWREQLWKSGILRSSPMFVPECADSVGIEEDPTCIICQQFLHLSAIVCNCRPSVFACL 300
Query: 653 EHWEHLCECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRPTTLT 712
EHW+HLCEC+ KL L YR+TLAEL + V++ +R S + R L
Sbjct: 301 EHWKHLCECEPTKLRLEYRYTLAELDMMVQEVEKFGGCKTQETKISQRPSSGTKRSIALN 360
Query: 713 KKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNK 772
KK +G++V+ ++ ++WL + KVL FSS Y TLL+E+EQFLWAG EMD VRD+
Sbjct: 361 KKQEGMQVSQARPADKWLLRASKVLDAAFSSVEYATLLKESEQFLWAGSEMDRVRDVTKS 420
Query: 773 LIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYA 832
L + + WAE + DCL K E + DS KV L+ ++ELL +P+PC G+L L++YA
Sbjct: 421 LNKAKIWAEAVSDCLSKVEGEVN---DDSMKVHLEFIDELLRVNPVPCFNSGYLKLKDYA 477
Query: 833 EEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC 892
EEAR L ++I++ALS+ I++LELL+S S PI + + E LS++ISSAK+ ++
Sbjct: 478 EEARKLSEKIDSALSSSPTITQLELLHSEVSRSPISLKKHEILSKKISSAKMLAKRAKRY 537
Query: 893 ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKT 952
+++ P IE+D L+KL SE L+L + +PET+ +L ++ ++ES R + ++ L GS+SL+
Sbjct: 538 LTDAKPPGIEMDALFKLNSEMLELHVQLPETEGILDLVKKSESARDKSNKVLTGSLSLEN 597
Query: 953 VELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILK 1012
VE LL E F++N+PEL +L+QYH D + WI+R ND++V++ KDQ +I +L+ +L+
Sbjct: 598 VEELLHEFDSFSINVPELNILRQYHVDTLSWISRFNDVMVDVREGKDQRKLISDLSSLLR 657
Query: 1013 EGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFI 1072
+GASL IQV+ LPLVEVELKKA CREKA + LDFI Q+ +EAVIL IE E++F+
Sbjct: 658 DGASLGIQVEGLPLVEVELKKASCREKARTVYTARKSLDFIEQLLSEAVILHIEEEEIFV 717
Query: 1073 DLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWL 1132
++SG+L+ A WEERA+ IL ++ QM E +D++R S +I VLP+L ++N IS+A++WL
Sbjct: 718 EISGILSTARCWEERASTILENETQMYELKDLVRMSVNIDAVLPTLQGIENTISSAETWL 777
Query: 1133 KNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 1192
+ SE FL++ ++A + CS+L L LKDLV+Q+K L + L+E LE ++ NCERWQ
Sbjct: 778 QKSEPFLSATSSMASSPCSMLELPVLKDLVTQAKLLNVQLQEPRILETLLLNCERWQCDN 837
Query: 1193 SSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACS 1252
LLQ+ LLD I DG ++++ KI LIT ++SA GL+LG +F E+ +L+ A
Sbjct: 838 HQLLQETEDLLDNAKIDDGTHSNILPKIMDLITRVDSARRSGLALGLNFDELPKLRTASL 897
Query: 1253 TLHWCKKALSFLSVSPS---LEDV--ESLMAVA----EGLSTRCFSS--MLWNSLIH--- 1298
L WC K ++ S SP+ LEDV SL + EG + L L+
Sbjct: 898 KLGWCCKTITLSSSSPTSELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGKRLMELKD 957
Query: 1299 -GVKWLKRALEVIS 1311
G++W KRA +V++
Sbjct: 958 TGLEWAKRARKVVT 971
Score = 449 (163.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 91/172 (52%), Positives = 122/172 (70%)
Query: 1617 SKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQK-LMELNRIGSQWADVAKKVVLDSG 1675
S+LLE + KP++ IQ +LKEG + I P+++Y K LMEL G +WA A+KVV DSG
Sbjct: 915 SELLEDVGKPSLQHIQQHLKEGQTLEILPEEYYLGKRLMELKDTGLEWAKRARKVVTDSG 974
Query: 1676 ALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHID 1735
AL+L+ VFELI+EGENLPV+ E+EL+SLRARSML+CIC KPY+ ++M++C QC EWYH
Sbjct: 975 ALALEDVFELISEGENLPVHAEQELQSLRARSMLHCICLKPYNSRSMVSCSQCGEWYHTY 1034
Query: 1736 CVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSR 1787
C+KL P+ Y+C+AC P AE +TPQ +D R EP+ PS +R
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAE--TTPQ-IDPARAT----EPERPSLNQRRTR 1079
Score = 68 (29.0 bits), Expect = 2.4e-283, Sum P(3) = 2.4e-283
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 1393 EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHG--SVSM 1450
++++ D W +R +++V T G +L + + I + + ++ + + SM
Sbjct: 950 KRLMELKDTGLEWAKRARKVV-TDSGAL-ALEDVFELISEGENLPVHAEQELQSLRARSM 1007
Query: 1451 TLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C+C + + + CS C + YH CL+ +AY+C C
Sbjct: 1008 LHCICLKPYNSR-SMVSCSQCGEWYHTYCLKL----HWRPKAYVCSAC 1050
Score = 61 (26.5 bits), Expect = 1.5e-38, Sum P(4) = 1.5e-38
Identities = 52/291 (17%), Positives = 117/291 (40%)
Query: 1154 RLESLKDLVSQSK-FLKISLKEQTELEKVIN-NCERWQNHASSLLQDARCLLD---KDDI 1208
++ S K L ++K +L + E++ + N E + H L + +LD K +
Sbjct: 523 KISSAKMLAKRAKRYLTDAKPPGIEMDALFKLNSEMLELHVQ--LPETEGILDLVKKSES 580
Query: 1209 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISEL-QNACSTLHWCKKALSFLSVS 1267
SN +++ L ++E + S + E++ L Q TL W + F V
Sbjct: 581 ARDKSNKVLTGSLSL-ENVEELLHEFDSFSINVPELNILRQYHVDTLSWISR---FNDVM 636
Query: 1268 PSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFK-------RCK 1320
+ + + + LS+ + G+ ++ +E+ A C+ K R
Sbjct: 637 VDVREGKDQRKLISDLSSLLRDGASLGIQVEGLPLVE--VELKKASCREKARTVYTARKS 694
Query: 1321 LSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKE 1380
L +E++L+ ++ + E++ + + W+E+ ++ + M +LK+
Sbjct: 695 LDFIEQLLSEAVILHIEEEEIFVEISGILSTARCWEERASTIL------ENETQMYELKD 748
Query: 1381 LGEAAA-FDC--PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
L + D P L+ + + + E W Q+ + + + +S +L+
Sbjct: 749 LVRMSVNIDAVLPTLQGIENTISSAETWLQKSEPFLSATSSMASSPCSMLE 799
Score = 52 (23.4 bits), Expect = 1.5e-38, Sum P(4) = 1.5e-38
Identities = 28/115 (24%), Positives = 47/115 (40%)
Query: 39 EFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSA-- 96
E++ L + + E E++G CK K + P + S K + + QAR A
Sbjct: 317 EYRYTLAELDMMVQEVEKFGGCKTQETKISQRPSSGTKRSIALNKKQEGMQVSQARPADK 376
Query: 97 -------ACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELD----LCKLFNAAK 140
D+ +EY+ LKE +++ + G E+D + K N AK
Sbjct: 377 WLLRASKVLDAAFSSVEYATLLKE------SEQFLWAGSEMDRVRDVTKSLNKAK 425
Score = 46 (21.3 bits), Expect = 5.0e-281, Sum P(3) = 5.0e-281
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 1254 LHWCKKALSFLSVSPSL--EDVESLMAVAEGLSTRC---FSSMLWNSLIH 1298
L W K+A ++ S +L EDV L++ E L S+ S++H
Sbjct: 960 LEWAKRARKVVTDSGALALEDVFELISEGENLPVHAEQELQSLRARSMLH 1009
Score = 45 (20.9 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1301 KWLKRALEVISAPCKFKRCK--LSDVEEVL-AGCKGINFSFPVVIGELTSAIQKHKLWQE 1357
KWL RA +V+ A L + E+ L AG + + ++T ++ K K+W E
Sbjct: 376 KWLLRASKVLDAAFSSVEYATLLKESEQFLWAGSEMDR------VRDVTKSLNKAKIWAE 429
Query: 1358 QV 1359
V
Sbjct: 430 AV 431
Score = 44 (20.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1815 SGIDNLWWHNRKPFRRAAKKRTVLDSLCPFIYT 1847
+ +++L W RK +R K+ + L P+ +T
Sbjct: 1085 AAVNDLKWKTRKHIKRTTKRSPQVHIL-PWFFT 1116
Score = 42 (19.8 bits), Expect = 8.1e-278, Sum P(2) = 8.1e-278
Identities = 11/61 (18%), Positives = 22/61 (36%)
Query: 1251 CSTLHW------CKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLK 1304
C LHW C +P ++ + L+ R + ++ ++ +KW
Sbjct: 1035 CLKLHWRPKAYVCSACCPLAETTPQIDPARATEPERPSLNQRRTRMVATDAAVNDLKWKT 1094
Query: 1305 R 1305
R
Sbjct: 1095 R 1095
Score = 37 (18.1 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 1344 ELTSAIQKHKLWQEQV 1359
EL K K W+EQ+
Sbjct: 233 ELLRIYSKEKTWREQL 248
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 923 (330.0 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 188/446 (42%), Positives = 266/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAIREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + D + + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-IKDGQRKMLPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C + L YR+ L +L L V
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 221 (82.9 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ +F F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEIVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 146 (56.5 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 982
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 983 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 1037 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 1092
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 1093 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 1150
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 1189
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 91 (37.1 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGD-WRCPKC 340
Score = 83 (34.3 bits), Expect = 1.4e-117, Sum P(3) = 1.4e-117
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 1052 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 1109
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 1110 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 1168
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 1169 KISLKEQTELEKVINNCERWQNHASSLLQ 1197
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 6.0e-117, Sum P(3) = 6.0e-117
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 44/158 (27%), Positives = 65/158 (41%)
Query: 1631 IQNYLKEGLLMNISPKDHYRQKLM----ELNRIGS----QWADVAKKVV-LDSGALSLDK 1681
IQ + G MNI PK R K E+NR Q KVV L GA DK
Sbjct: 201 IQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQIFGAGPKVVGLAVGAK--DK 258
Query: 1682 VFELI--------AEGENLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWY 1732
E+ ++ N+ + K S+ + C+ C + +E ++ C CD+ Y
Sbjct: 259 EDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSY 318
Query: 1733 HIDCVKLLSAPEI----YICAACKPQAEESSTPQNVDG 1766
H C+ L P++ + C C AEE + P+ G
Sbjct: 319 HTFCL-LPPLPDVPKGDWRCPKCV--AEECNKPREAFG 353
Score = 66 (28.3 bits), Expect = 8.7e-116, Sum P(3) = 8.7e-116
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1780 SPKHT 1784
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 2.9e-113, Sum P(3) = 2.9e-113
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 1347 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 1394
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 1388 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 1436
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 1655 ELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGE 1690
EL + + + + VV +S ++VFEL+ + E
Sbjct: 638 ELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDE 673
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 923 (330.0 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 188/446 (42%), Positives = 266/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAIREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + D + + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-IKDGQRKMLPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C + L YR+ L +L L V
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 221 (82.9 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ +F F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEIVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 146 (56.5 bits), Expect = 3.3e-124, Sum P(3) = 3.3e-124
Identities = 81/339 (23%), Positives = 153/339 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 982
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 983 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 1037 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 1092
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 1093 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 1150
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 1189
+ LE L+ L ++ + + + L ++E + W+
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWR 1054
Score = 91 (37.1 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGD-WRCPKC 340
Score = 83 (34.3 bits), Expect = 1.4e-117, Sum P(3) = 1.4e-117
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 1052 FIRQ-VTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA-QMCEFEDIIRASQ 1109
F++Q V+ VI Q + K +D + ERA + ++ + + + +I
Sbjct: 829 FVQQLVSLPCVISQTRQVKNLLD------DVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 1110 DIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL-VSQSKFL 1168
++V LP L ++ E+ A+ WL L L+ P +L ++ L D V +
Sbjct: 883 SLYVELPELPRLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMKKLIDSGVGLAPHH 936
Query: 1169 KISLKEQTELEKVINNCERWQNHASSLLQ 1197
+ K EL++++ ERW+ A LQ
Sbjct: 937 AVE-KAMAELQELLTVSERWEEKAKVCLQ 964
Score = 77 (32.2 bits), Expect = 6.0e-117, Sum P(3) = 6.0e-117
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 44/158 (27%), Positives = 65/158 (41%)
Query: 1631 IQNYLKEGLLMNISPKDHYRQKLM----ELNRIGS----QWADVAKKVV-LDSGALSLDK 1681
IQ + G MNI PK R K E+NR Q KVV L GA DK
Sbjct: 201 IQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQIFGAGPKVVGLAVGAK--DK 258
Query: 1682 VFELI--------AEGENLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWY 1732
E+ ++ N+ + K S+ + C+ C + +E ++ C CD+ Y
Sbjct: 259 EDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSY 318
Query: 1733 HIDCVKLLSAPEI----YICAACKPQAEESSTPQNVDG 1766
H C+ L P++ + C C AEE + P+ G
Sbjct: 319 HTFCL-LPPLPDVPKGDWRCPKCV--AEECNKPREAFG 353
Score = 66 (28.3 bits), Expect = 8.7e-116, Sum P(3) = 8.7e-116
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1780 SPKHT 1784
S HT
Sbjct: 1067 S--HT 1069
Score = 42 (19.8 bits), Expect = 2.9e-113, Sum P(3) = 2.9e-113
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 1347 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 1394
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 5.8e-117, Sum P(4) = 5.8e-117
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 1388 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 1436
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 1655 ELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGE 1690
EL + + + + VV +S ++VFEL+ + E
Sbjct: 638 ELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDE 673
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 936 (334.5 bits), Expect = 3.7e-122, Sum P(5) = 3.7e-122
Identities = 197/474 (41%), Positives = 272/474 (57%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
IC C G E MLLCD C+ +H +CL PPL +P+G W C C+ + +++FGF
Sbjct: 450 ICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGF 509
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSGS--ASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+R YT++ F ++AD+ K++ FR +E++FW IV +V V YG+DL
Sbjct: 510 EQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLH 569
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
T +GSGFP D EY S WNLNNLP L+ SIL ++ +I+G+ PW+
Sbjct: 570 TMDHGSGFPTKSSLYLLPGD----QEYAESSWNLNNLPLLEDSILGHINADISGMNAPWM 625
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM F+AFCWH EDH YS+NY HWG+PK WY VPGS A FE+ M+ + P+LF +QPD
Sbjct: 626 YVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPD 685
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP++L+ N VPV+ Q G FVITFPR+YHAGFN G N AEAVNFAPADW
Sbjct: 686 LLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADW 745
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA--KSDLDSKVSPYLKRELLRVYTKERMWRE 598
L G + Y + V SH+EL+C +A + L ++ ++ + E+ R+
Sbjct: 746 LKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRK 805
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L G+ ++ R+ E V +E C C +LSAVAC C VCL H+ L
Sbjct: 806 SLLEWGVTRAE----RRAFELVNDDERH-CQECNTTCFLSAVACECNDKLIVCLRHYTVL 860
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRPTTLT 712
C C K L+YR+TL E+ L L + R I ++ PT++T
Sbjct: 861 CGCAPEKHTLIYRYTLDEM-PLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVT 913
Score = 228 (85.3 bits), Expect = 3.7e-122, Sum P(5) = 3.7e-122
Identities = 49/127 (38%), Positives = 76/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ PT +EFK+PL YI KIR+ AE+ GI KI+PP +W PPFA+D+ F + Q +++
Sbjct: 162 PVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKLRFVPRVQRLNE 221
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + ++F E G+ L K E + LDL L + GG ++ K
Sbjct: 222 LEAKTRV--KLNFLDQIAKFW-ELQGSSL-KIPMVERKALDLYTLHRIVQEEGGMEQTTK 277
Query: 151 EKKWGEV 157
++KW +V
Sbjct: 278 DRKWAKV 284
Score = 150 (57.9 bits), Expect = 3.7e-122, Sum P(5) = 3.7e-122
Identities = 75/351 (21%), Positives = 153/351 (43%)
Query: 873 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 932
+KL + S + W R + P ++ + L +L EA K P + +L+ +
Sbjct: 884 QKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKF--PSS-LLIDRLNA 940
Query: 933 AESCRARCSEALR--GSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWI---ARL 987
A +C ++ G ++T QE + + M ELEL Q + I A +
Sbjct: 941 AAVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASV 1000
Query: 988 NDILVN----INGRKDQHNVI------DELNCILKEGASLRIQVDDLPLVEVELK--KAH 1035
++LV + + Q + EL ++ EG+SLRI++ L L++ LK K +
Sbjct: 1001 RELLVLGKQFVERSESQLQLSLESLEESELETLINEGSSLRIELQQLDLLQKRLKQCKWY 1060
Query: 1036 CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFID-----LSGVLAAAMRWEERAAD 1090
R + L+ +K+ ++ + A ++ ++D L + A WE +AA
Sbjct: 1061 KRSQGLRETSSKLTYQDVKNLLHIAAA-DLDPTDPYVDKEMRKLQQIGADIEAWESQAAK 1119
Query: 1091 I---LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 1147
L + ++ E E ++++ DI +PS +++ + A+ WL+ E +
Sbjct: 1120 YFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTY- 1178
Query: 1148 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ-NHASSLLQ 1197
C +L+ ++ + + I L+E + ++ +N+ +W+ N A + L+
Sbjct: 1179 --C-----HTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTACAFLK 1222
Score = 99 (39.9 bits), Expect = 3.3e-116, Sum P(5) = 3.3e-116
Identities = 61/229 (26%), Positives = 100/229 (43%)
Query: 826 LIL-QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKV 884
L+L + + E + S +Q +L + + SELE L + S L I + + + L +R+ K
Sbjct: 1004 LVLGKQFVERSESQLQ---LSLESLEE-SELETLINEGSSLRIELQQLDLLQKRLKQCKW 1059
Query: 885 WRDS--VRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDM---LLKMIG---QA-ES 935
++ S +R+ S+K DV L A DL P D L+ IG +A ES
Sbjct: 1060 YKRSQGLRET-SSKLTYQ---DVKNLLHIAAADLDPTDPYVDKEMRKLQQIGADIEAWES 1115
Query: 936 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 995
A+ L L +E L+ D +P LLK A W+ + + N N
Sbjct: 1116 QAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRAVEQLQQN-N 1174
Query: 996 GRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC 1044
H L +++ G ++ IQ+++L ++ L AH + K AC
Sbjct: 1175 HVTYCHT----LEAMIERGLNIPIQLEELSRMQGHLNSAH-QWKDNTAC 1218
Score = 90 (36.7 bits), Expect = 3.7e-115, Sum P(5) = 3.7e-115
Identities = 71/324 (21%), Positives = 131/324 (40%)
Query: 1103 DIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF-LASAFAVAPASC-------SLLR 1154
DI+ A V L L E+ E T K +S L +A AV C + +
Sbjct: 902 DIVDAHTPTSVTLQELQELCKEAETKK--FPSSLLIDRLNAAAVEAEKCVTVIQQLGINK 959
Query: 1155 LESLKDLVSQSKFLKISLKE-QTELEKVINNCERWQNHAS--SLLQDARCLLDKDDIGDG 1211
+ + D ++ K++++E + ++++ N C AS LL + +++ +
Sbjct: 960 VRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSE--SQ 1017
Query: 1212 LSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL- 1270
L SL S +E+ + +E+ N G SL + ++ LQ W K++ S L
Sbjct: 1018 LQLSLES-LEE--SELETLINEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLT 1074
Query: 1271 -EDVESLMAVAEG-LSTRCFSSMLWNSLIHGVKWLKRALEVI-SAPCK-FKRC----KLS 1322
+DV++L+ +A L + + + ++ + +E S K F+R +L
Sbjct: 1075 YQDVKNLLHIAAADLDP---TDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELG 1131
Query: 1323 DVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELG 1382
++E+ L IN P G L A++K + W V Q +L + E G
Sbjct: 1132 EIEQFLKSASDINGQVPSH-GLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMI-ERG 1189
Query: 1383 EAAAFDCPELEKVLSKVDKVENWK 1406
EL ++ ++ WK
Sbjct: 1190 LNIPIQLEELSRMQGHLNSAHQWK 1213
Score = 88 (36.0 bits), Expect = 6.0e-115, Sum P(5) = 6.0e-115
Identities = 59/273 (21%), Positives = 112/273 (41%)
Query: 852 ISELELLYSRASGLPICIV-ESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 910
+ ELEL L CI+ E + + + K + + + + +E L L
Sbjct: 977 MEELELFVQEIDNL-CCIIDEGASVRELLVLGKQFVERSESQLQLSLES-LEESELETLI 1034
Query: 911 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE----LLLQELGDFTVN 966
+E L+I++ + D+L K + Q + + S+ LR + S T + LL D
Sbjct: 1035 NEGSSLRIELQQLDLLQKRLKQCKWYKR--SQGLRETSSKLTYQDVKNLLHIAAADLDPT 1092
Query: 967 MP----ELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVD 1022
P E+ L+Q +D W ++ + QH + E+ LK + + QV
Sbjct: 1093 DPYVDKEMRKLQQIGADIEAWESQAAKYFRRLT---QQHE-LGEIEQFLKSASDINGQVP 1148
Query: 1023 DLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI-----LQIEREKLFIDLSGV 1077
L++ L+KA +A++ + + T EA+I + I+ E+L + G
Sbjct: 1149 SHGLLKDALRKAREWLRAVEQLQQNNHVTYCH--TLEAMIERGLNIPIQLEELS-RMQGH 1205
Query: 1078 LAAAMRWEERAADILIHKAQMCEFEDIIRASQD 1110
L +A +W++ A + K +++ D
Sbjct: 1206 LNSAHQWKDNTACAFLKKGTFYTLLEVLMPRSD 1238
Score = 88 (36.0 bits), Expect = 6.3e-19, Sum P(4) = 6.3e-19
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESVSQFG 1510
+C C E L+C C D YH CL P E ++CP C E S+ FG
Sbjct: 450 ICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGE-WLCPRCVVEEVSKPQEAFG 508
Score = 83 (34.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 1708 MLY-C-ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAEESSTPQ 1762
M Y C IC + E++M+ C CD+ YH C+ L S P+ ++C C EE S PQ
Sbjct: 447 MKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCV--VEEVSKPQ 504
Query: 1763 NVDG 1766
G
Sbjct: 505 EAFG 508
Score = 77 (32.2 bits), Expect = 2.0e-121, Sum P(5) = 2.0e-121
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 1687 AEGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSA 1742
AE + L E +++ M ++C+C+ + M C C +W+H DCV SA
Sbjct: 1270 AEEQELLDMRELRRQNMNKNPMRDMFCLCKSEF-RNLMFNCQLCRDWFHEDCVPPPSA 1326
Score = 74 (31.1 bits), Expect = 3.3e-114, Sum P(6) = 3.3e-114
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 823 PGHLILQNYAEEARSLIQEINAALSACSKIS---ELELLYSRASGLPICIVESEKLSQRI 879
P H +L++ +AR ++ + L + ++ LE + R +PI + E ++ +
Sbjct: 1148 PSHGLLKDALRKAREWLRAVEQ-LQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHL 1206
Query: 880 SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDV-PE-TDMLLKMIGQAE 934
+SA W+D+ K ++VL S+A+++ D+ P D LK AE
Sbjct: 1207 NSAHQWKDNTACAFLKKGTFYTLLEVLMP-RSDAINIDSDLKPRFQDDFLKEKNPAE 1262
Score = 69 (29.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 241 KEDELDQICEQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHV-PRGNWYCLEC 293
++DE + E C EV + CD CN+ +H+YC+ + P ++ C+ C
Sbjct: 1750 EDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 67 (28.6 bits), Expect = 3.7e-122, Sum P(5) = 3.7e-122
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL----LSAPEIYICAAC 1751
C KP + + C C+EW+H+ CV L + + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 65 (27.9 bits), Expect = 1.5e-112, Sum P(5) = 1.5e-112
Identities = 21/94 (22%), Positives = 42/94 (44%)
Query: 1612 WRVRVSKLLEGLTKP-TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKV 1670
W + +K LT+ +G+I+ +LK +N H L + R +W +++
Sbjct: 1113 WESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSH--GLLKDALRKAREWLRAVEQL 1170
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1704
++ + +I G N+P+ LE EL ++
Sbjct: 1171 QQNNHVTYCHTLEAMIERGLNIPIQLE-ELSRMQ 1203
Score = 60 (26.2 bits), Expect = 3.7e-122, Sum P(5) = 3.7e-122
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRP 1482
C+C +S+ + L F C C+D +H C+ P
Sbjct: 1296 CLC-KSEFRNLMFN-CQLCRDWFHEDCVPP 1323
Score = 56 (24.8 bits), Expect = 3.0e-16, Sum P(5) = 3.0e-16
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 239 VDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
++K D C CKS +M C C +H C+ PP
Sbjct: 1286 MNKNPMRDMFC-LCKSEFRN-LMFNCQLCRDWFHEDCVPPP 1324
Score = 55 (24.4 bits), Expect = 6.4e-119, Sum P(5) = 6.4e-119
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 1455 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + +E++++ C C + +H+ C+ + YIC C
Sbjct: 1761 CHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYICIRC 1805
Score = 54 (24.1 bits), Expect = 3.3e-116, Sum P(5) = 3.3e-116
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 1119 DEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL------ESLKDLVSQSKFLKISL 1172
DE + + + N E +A A + + LL+L E+L DL+ + L++SL
Sbjct: 1460 DEDECRLRIVEDNFSNDEDEPRTAPATSTVNSDLLKLLSDSEIENLLDLMMEGDLLEVSL 1519
Query: 1173 KEQTELEKVI 1182
E EL +++
Sbjct: 1520 DETQELWRIL 1529
Score = 53 (23.7 bits), Expect = 1.5e-112, Sum P(5) = 1.5e-112
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1392 LEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
L+K+ K E W RC++IV +L L + K++
Sbjct: 883 LQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEA 924
Score = 52 (23.4 bits), Expect = 5.4e-116, Sum P(5) = 5.4e-116
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 1196
RLE++ L+ Q + L I L E L + WQ+ A L
Sbjct: 1358 RLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 51 (23.0 bits), Expect = 9.1e-111, Sum P(6) = 9.1e-111
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISN 895
LPI + E E L A W+D RK +S+
Sbjct: 1372 LPIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 48 (22.0 bits), Expect = 3.3e-114, Sum P(6) = 3.3e-114
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 940 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 991
C +R L+T+ LL +L + +PE E L+ A+ W R L
Sbjct: 1348 CPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKAL 1400
Score = 43 (20.2 bits), Expect = 2.0e-121, Sum P(5) = 2.0e-121
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 1749 AACKPQAEESSTPQNVDGGRTNAEF------LEPKTPSPKHTNSRKK 1789
A+ P A+ + + +GG TN+ TP+P T+ ++K
Sbjct: 1643 ASTTPGADADAENKQANGGNTNSSTGSGGGNSATTTPTPGSTHKKRK 1689
Score = 43 (20.2 bits), Expect = 2.3e-109, Sum P(4) = 2.3e-109
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 702 ISSSNRPT---TLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSD 744
ISS +P +LTK+ G + + + C L++++ FS+D
Sbjct: 1431 ISSPRKPRRRGSLTKEASGSTESDADDDDDEDECRLRIVEDNFSND 1476
Score = 41 (19.5 bits), Expect = 3.6e-120, Sum P(5) = 3.6e-120
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 1374 LMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGT 1415
L++QL++L PE E + ++ NW+ R ++ + +
Sbjct: 1365 LLVQLQQL----PIRLPEDEALRCLAERAMNWQDRARKALSS 1402
Score = 40 (19.1 bits), Expect = 9.0e-15, Sum P(5) = 9.0e-15
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 1319 CKLSDVEEVLAGCKGINFSF 1338
C DVEE + C G + S+
Sbjct: 454 CNRGDVEESMLLCDGCDDSY 473
Score = 38 (18.4 bits), Expect = 9.1e-111, Sum P(6) = 9.1e-111
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 726 VEQWLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-R 784
+E W S + K + L G E EQFL + + I G+ + G+ +
Sbjct: 1110 IEAWESQAAKYFRRLTQQHELG----EIEQFLKSASD-----------INGQVPSHGLLK 1154
Query: 785 DCLHKAENW 793
D L KA W
Sbjct: 1155 DALRKAREW 1163
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 928 (331.7 bits), Expect = 3.8e-122, Sum P(4) = 3.8e-122
Identities = 189/440 (42%), Positives = 267/440 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +PRG W C +C+ ++ ++FGF
Sbjct: 319 VCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKCIMAECKRPPEAFGF 378
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSGSASRVQ---MEKKFWEIVEGAAGNVEVMYGSDL 359
+ YT++SF +AD K F S V +EK+FW +V +V V YG+D+
Sbjct: 379 EQATQEYTLQSFGEMADSFKADYF-SMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADI 437
Query: 360 DTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPW 419
+ +GSGFP R S + EY S WNLN +P L S+L ++ +I+G+ VPW
Sbjct: 438 HSKEFGSGFPVSSSQRILSPEEE---EYATSGWNLNVMPVLDQSVLCHINADISGMKVPW 494
Query: 420 LYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQP 479
LY+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QP
Sbjct: 495 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQP 554
Query: 480 DLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPAD 539
DLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF AD
Sbjct: 555 DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTAD 614
Query: 540 WLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWR 597
WLP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R
Sbjct: 615 WLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLR 674
Query: 598 ERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEH 657
+ L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H
Sbjct: 675 KALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHIND 729
Query: 658 LCECKTRKLHLLYRHTLAEL 677
LC+C + + +L YR+TL EL
Sbjct: 730 LCKCSSSRQYLRYRYTLDEL 749
Score = 225 (84.3 bits), Expect = 3.8e-122, Sum P(4) = 3.8e-122
Identities = 49/127 (38%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ PT EF+DPL+YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVMEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 169 (64.5 bits), Expect = 3.8e-122, Sum P(4) = 3.8e-122
Identities = 71/277 (25%), Positives = 130/277 (46%)
Query: 783 IRDCLHKAENW-SSLPGSDS-EKVRLDC----VNELL----GFDPLPCNEPGHLI--LQN 830
+R+C+H+AE S + G S ++ R+ + EL LPC H I ++
Sbjct: 808 LRNCMHEAEACVSQVLGLVSGQEARIQTSPLTLTELRVLLEQMSSLPCAM--HQIEDVKE 865
Query: 831 YAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSV 889
E+ + E AL S C + + L + L + + E+ +L Q++ A+ W D V
Sbjct: 866 VLEQVEAYQIEAREALASLCPSVGLMRSLLEKGQQLGVDVPEAHQLQQQVEQAR-WLDDV 924
Query: 890 RKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKMIGQAESCRARCSEAL 944
+K ++ + I +L A +D ++ LL + + E C EA
Sbjct: 925 KKALAPSAQRGSLVIMQGLLVTGTKIASSPCVDKARAELQELLTIAERWEEKAHFCLEA- 983
Query: 945 RGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 1004
R T+E +++E + V++P ++ LK + A WIA +++I NG D + +
Sbjct: 984 RQKHPPATLEAIIREAENIPVHLPNIQALKDALAKAQAWIADVDEIQ---NG--DHYPCL 1038
Query: 1005 DELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKA 1040
D+L C++ G L + +++L +E+++ AH REKA
Sbjct: 1039 DDLECLVAVGRDLPVSLEELRQLELQVLTAHSWREKA 1075
Score = 154 (59.3 bits), Expect = 1.4e-120, Sum P(4) = 1.4e-120
Identities = 86/379 (22%), Positives = 164/379 (43%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 724 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKIRAESFDTWANKVRVALEVEDG 779
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 954
+ L LESEA + + P +++L ++ + +AE+C ++ + G + ++T
Sbjct: 780 RKRSFEELRALESEARERRF--PNSELLQRLRNCMHEAEACVSQVLGLVSGQEARIQTSP 837
Query: 955 LLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV---IDELNCIL 1011
L L EL M L D + ++ I R+ ++ + + +L
Sbjct: 838 LTLTELRVLLEQMSSLPCAMHQIEDVKEVLEQVE--AYQIEAREALASLCPSVGLMRSLL 895
Query: 1012 KEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQIE 1066
++G L + V + ++ ++++A + KAL + L ++ VT +
Sbjct: 896 EKGQQLGVDVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTGTKIASSPC 955
Query: 1067 REKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNE 1124
+K +L +L A RWEE+A L K E IIR +++I V LP++ +++
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIREAENIPVHLPNIQALKDA 1015
Query: 1125 ISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 1183
++ A++W+ + E+ + P C L+ L+ LV+ + L +SL+E +LE +
Sbjct: 1016 LAKAQAWIADVDEIQNGDHY---P--C----LDDLECLVAVGRDLPVSLEELRQLELQVL 1066
Query: 1184 NCERWQNHASSL-LQDARC 1201
W+ AS + L+ C
Sbjct: 1067 TAHSWREKASRMFLKKNSC 1085
Score = 86 (35.3 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYC 1498
+ + +C C ++ + L+C C D YH+ CL P E+ R + CP C
Sbjct: 315 IDLYVCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRG---VWRCPKC 364
Score = 79 (32.9 bits), Expect = 1.0e-112, Sum P(4) = 1.0e-112
Identities = 50/196 (25%), Positives = 83/196 (42%)
Query: 1521 SDLRMLIELLSDSEFFCRGIE-AKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1579
++LR+L+E +S IE K+VL++V +E + L + S L + L
Sbjct: 841 TELRVLLEQMSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCP--SVGLMRSL---- 894
Query: 1580 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLE-GLTKPTIGQIQNYLKEG 1638
L+ + GV D L + + W V K L + ++ +Q L G
Sbjct: 895 ------LEKGQQLGV-DVPEAHQLQQQVEQARWLDDVKKALAPSAQRGSLVIMQGLLVTG 947
Query: 1639 LLMNISP-KDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAEGENLPVYL 1696
+ SP D R +L EL I +W + A L++ E +I E EN+PV+L
Sbjct: 948 TKIASSPCVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIREAENIPVHL 1006
Query: 1697 E--KELKSLRARSMLY 1710
+ LK A++ +
Sbjct: 1007 PNIQALKDALAKAQAW 1022
Score = 73 (30.8 bits), Expect = 3.6e-110, Sum P(3) = 3.6e-110
Identities = 87/440 (19%), Positives = 172/440 (39%)
Query: 1115 LPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKE 1174
+ SL ++I K L+ E + A + C + L ++ L+ + + L + + E
Sbjct: 850 MSSLPCAMHQIEDVKEVLEQVEAYQIEAREALASLCPSVGL--MRSLLEKGQQLGVDVPE 907
Query: 1175 QTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAAN-C 1233
+L++ + RW L D + L SLV L+T + A++ C
Sbjct: 908 AHQLQQQVEQA-RW-------LDDVKKALAPS----AQRGSLVIMQGLLVTGTKIASSPC 955
Query: 1234 GLSLGFDFHEISELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SM 1291
+ E+ + H+C +A P+ +E+++ AE + +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQ--KHPPAT--LEAIIREAENIPVHLPNIQA 1011
Query: 1292 LWNSLIHGVKWLKRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTS- 1347
L ++L W+ E+ + PC L D+E ++A + PV + EL
Sbjct: 1012 LKDALAKAQAWIADVDEIQNGDHYPC------LDDLECLVA----VGRDLPVSLEELRQL 1061
Query: 1348 ---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE---LEKVL----S 1397
+ H W+E+ + F LK ++L+ L A + +EK L S
Sbjct: 1062 ELQVLTAHS-WREKASRMF-LK-KNSCYTLLEVLCPCAHAGSDSSKRRRWIEKELRLYRS 1118
Query: 1398 KVD------KVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMT 1451
D ++ + IV G++ G+LQ + + + + + S + +
Sbjct: 1119 CTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSTTASSATS 1178
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFG 1510
+C+C + + + L C C+D +H QC+ P + + P ++E ++ +F
Sbjct: 1179 ICVCGKVPAG-VGTLQCDLCQDWFHGQCVSVPHILSSSRPSPTSSPLLAWWEWDT--KFL 1235
Query: 1511 GSPLRFGGKRSDLRMLIELL 1530
PL +R L ++ LL
Sbjct: 1236 -CPLCMRSRRPRLETILALL 1254
Score = 72 (30.4 bits), Expect = 5.6e-112, Sum P(4) = 5.6e-112
Identities = 29/146 (19%), Positives = 61/146 (41%)
Query: 763 MDAVRDMVNKLIE-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCN 821
+D R + +L+ RW E CL + P + E + + N +P +
Sbjct: 956 VDKARAELQELLTIAERWEEKAHFCLEARQKH---PPATLEAIIREAEN-------IPVH 1005
Query: 822 EPGHLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRI 879
P L++ +A++ I +++ + + +LE L + LP+ + E +L ++
Sbjct: 1006 LPNIQALKDALAKAQAWIADVDEIQNGDHYPCLDDLECLVAVGRDLPVSLEELRQLELQV 1065
Query: 880 SSAKVWRDSVRKCI--SNKCPAAIEI 903
+A WR+ + N C +E+
Sbjct: 1066 LTAHSWREKASRMFLKKNSCYTLLEV 1091
Score = 65 (27.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 1709 LY-C-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
LY C IC + ++ ++ C CD+ YHI C+ + PEI
Sbjct: 317 LYVCRICSRGDEDDKLLLCDGCDDTYHIFCL-IPPLPEI 354
Score = 63 (27.2 bits), Expect = 3.8e-122, Sum P(4) = 3.8e-122
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQAEES 1758
C+C K + C C +W+H CV S P +I ++ +P S
Sbjct: 1180 CVCGKVPAGVGTLQCDLCQDWFHGQCV---SVP--HILSSSRPSPTSS 1222
Score = 53 (23.7 bits), Expect = 4.6e-108, Sum P(3) = 4.6e-108
Identities = 49/215 (22%), Positives = 81/215 (37%)
Query: 786 CLHKAENWSSLPGSDSEKVRL--DCVN-ELLGFDPLPCNEPGHLIL---QNYAEEARSLI 839
C H + S +++RL C + ELLG +PG +I+ + +E ++
Sbjct: 1095 CAHAGSDSSKRRRWIEKELRLYRSCTDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGIL 1154
Query: 840 QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPA 899
Q + SA K S L + +S IC+ K+ + + + D + +C
Sbjct: 1155 Q-LRRTNSA--KPSPLASSTTASSATSICVCG--KVPAGVGTLQC--DLCQDWFHGQC-- 1205
Query: 900 AIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVELLLQ 958
+ V + L S P + LL + C +R L+T+ LL
Sbjct: 1206 ---VSVPHILSSSRPS-----PTSSPLLAW--WEWDTKFLCPLCMRSRRPRLETILALLV 1255
Query: 959 ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L V +PE E L+ AI W R L +
Sbjct: 1256 ALQRLPVRLPEGEALQCLTERAIVWQGRARQALAS 1290
Score = 47 (21.6 bits), Expect = 2.4e-109, Sum P(4) = 2.4e-109
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1038 LDDLECLVAVGRDLPVSLE-ELRQL 1061
Score = 47 (21.6 bits), Expect = 2.0e-107, Sum P(3) = 2.0e-107
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNK 896
LP+ + E E L A VW+ R+ +++K
Sbjct: 1260 LPVRLPEGEALQCLTERAIVWQGRARQALASK 1291
Score = 47 (21.6 bits), Expect = 9.7e-12, Sum P(3) = 9.7e-12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
+C + +G+ G L CD C +H C+S P
Sbjct: 1181 VCGKVPAGV-GT--LQCDLCQDWFHGQCVSVP 1209
Score = 41 (19.5 bits), Expect = 7.7e-120, Sum P(4) = 7.7e-120
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 1203
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1246 RLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASKDVTTLL 1297
Score = 37 (18.1 bits), Expect = 3.7e-25, Sum P(4) = 3.7e-25
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 306 GKRYTVESFRRVADRAKKKRF 326
G++ + E R + A+++RF
Sbjct: 779 GRKRSFEELRALESEARERRF 799
Score = 37 (18.1 bits), Expect = 4.8e-16, Sum P(4) = 4.8e-16
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 1471 CKDCYHLQCLRPTE 1484
C C +C RP E
Sbjct: 361 CPKCIMAECKRPPE 374
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 927 (331.4 bits), Expect = 5.3e-122, Sum P(5) = 5.3e-122
Identities = 187/450 (41%), Positives = 269/450 (59%)
Query: 242 EDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD--- 297
+ +++Q IC C G + +LLCD C+ +H +CL PPL VP+G+W C +CL +
Sbjct: 272 DPQVEQYICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGK 331
Query: 298 -KDSFGFVPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEV 353
+ +FGF R YT+ +F +AD K F +EK+FW +V +V V
Sbjct: 332 PQVAFGFEQAPRDYTLRTFGDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTV 391
Query: 354 MYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNIT 413
YG+D+ + +GSGFP + V Y S WNLNN+P L+ S+L V +I
Sbjct: 392 EYGADIASKDFGSGFP--VKNGTFKVSPEE-EGYLTSGWNLNNMPVLEASVLTHVTADIC 448
Query: 414 GVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPD 473
G+ +PWLY+GM FS+FCWH EDH YS+NY HWG+PK WY PG A E VM+ P+
Sbjct: 449 GMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQLEDVMKGLAPE 508
Query: 474 LFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAV 533
LF++QPDLL QLVT++NP++L+E+GVP+Y Q G FVITFPR+YH+GFN G N AEAV
Sbjct: 509 LFESQPDLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV 568
Query: 534 NFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC-VVAKSD-LDSKVSPYLKRELLRVYT 591
NF ADWLP G + Y+ ++ V SH+E+ C + AK+D L+ +++ +++++ +
Sbjct: 569 NFCTADWLPLGRQCVEHYRSLYRYCVFSHDEMACNIAAKADSLELELACAVQKDMNAMIQ 628
Query: 592 KERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVC 651
+E++ RE+ ++ G+ S + P+ E+ C CR YLSA+ C C P VC
Sbjct: 629 EEKILREKAYKLGMWHSQQVDYDILPD-----EERQCAKCRTTCYLSAITCPCSPEQVVC 683
Query: 652 LEHWEHLCECKTRKLHLLYRHTLAELYDLF 681
L H + LC C R L Y++TLAEL F
Sbjct: 684 LHHTQDLCSCPARNYTLNYKYTLAELKTFF 713
Score = 215 (80.7 bits), Expect = 5.3e-122, Sum P(5) = 5.3e-122
Identities = 49/127 (38%), Positives = 72/127 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DP +I KIR AE GICKI PP W+PPFA D+ F + Q +++
Sbjct: 9 PVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACDVDRLHFTPRIQRLNE 68
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + ++F E G L K E + LDL L+ K GG+D V K
Sbjct: 69 LEAQTRV--KLNFLDQIAKFW-ELQGCTL-KIPHVERKTLDLFVLYKLVKEDGGFDVVCK 124
Query: 151 EKKWGEV 157
E++W ++
Sbjct: 125 ERRWTQI 131
Score = 158 (60.7 bits), Expect = 5.3e-122, Sum P(5) = 5.3e-122
Identities = 82/343 (23%), Positives = 148/343 (43%)
Query: 873 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM--- 929
+ L+ R S W V K + +++ L L +EA + K+ PETD+L M
Sbjct: 714 QALTARAESYDDWASKVNKILKADQDNKSDLEELRCLLAEA-EKKM-YPETDLLNDMRQV 771
Query: 930 IGQAESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELEL-LKQYHSDA 980
I A+ C + L G + +L ++EL F + +L ++Q A
Sbjct: 772 IQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQ----A 827
Query: 981 IFWIARLNDI----LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
F A LN + + + + L +L EGA L +++ L ++ L++A
Sbjct: 828 PFLKALLNRVEQFQQQSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQARW 887
Query: 1037 REKALKACD--TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 1092
E +A D + LD +R++ + V L E+ L +L WEE+A ++L
Sbjct: 888 VEAVQEASDQPADLSLDCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Query: 1093 IHKAQMC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 1150
+ + E I I LPS ++++ +S A+ W+ ++ A P
Sbjct: 948 TARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAREWIMEADALQAGGRI--PG-- 1003
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 1193
L +L +LVS++K + + L+ T LE +I+ + W+ A+
Sbjct: 1004 ----LVTLSELVSRAKGIPVMLEALTRLESLISEVQAWKESAA 1042
Score = 124 (48.7 bits), Expect = 4.5e-119, Sum P(5) = 4.5e-119
Identities = 65/277 (23%), Positives = 123/277 (44%)
Query: 1244 ISELQNACSTLHWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGV 1300
+ EL C HW +KA + L+ P S+E +E+ + + + S + L + +
Sbjct: 929 LQELLTVCE--HWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRAR 986
Query: 1301 KWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT---SAIQKHKLWQE 1357
+W+ A + + A + L + E+++ KGI PV++ LT S I + + W+E
Sbjct: 987 EWIMEA-DALQAGGRIPG--LVTLSELVSRAKGI----PVMLEALTRLESLISEVQAWKE 1039
Query: 1358 QVHQFFNLKCAQQSWSLMLQLK-ELGEAAAFDCPELEKVL--SKVD-KVENWKQRCKEIV 1413
+ F L+ + S +L + E G + E ++ K D K+++ ++++
Sbjct: 1040 SAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPCKKADVKLDSLFD-VEKVL 1098
Query: 1414 GTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGS--------VSMTLCMCCESDSKELEF 1465
TS D S + L + Q SL + + S ++ T+C+C + +
Sbjct: 1099 STSK-DTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVCLCHTVPAGPM-- 1155
Query: 1466 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
L C C+D YH C+ P D + ++CP C+ E
Sbjct: 1156 LQCELCRDAYHSGCV-PGFKDIQIGQPWLCPLCKRSE 1191
Score = 102 (41.0 bits), Expect = 3.8e-116, Sum P(5) = 3.8e-116
Identities = 89/420 (21%), Positives = 170/420 (40%)
Query: 749 LLREAEQFLWAGFEMDAVRDMVNKL-------IEGRRWAEGIRDCLHKAENWSSLPGSDS 801
LL EAE+ ++ E D + DM + I ++ G R +++ S
Sbjct: 750 LLAEAEKKMYP--ETDLLNDMRQVIQNADRCTIMAQQLLNGKRQTRYRSGGGKSQNQLTV 807
Query: 802 EKVRLDCVNELLGFDPLPCN---EPGHLILQNYAEEARSLIQEINAALSACSKISELELL 858
E++R +N+L +D LPC P L N E+ + Q + + S L+ L
Sbjct: 808 EELRA-FINKL--YD-LPCTIRQAPFLKALLNRVEQFQQ--QSFDMLAEDMAGSSALQGL 861
Query: 859 YSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKI 918
+GL + + + L QR+ A+ W ++V++ S++ PA + +D + +L + + L
Sbjct: 862 LDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQEA-SDQ-PADLSLDCMRRLIDQGVGLAP 918
Query: 919 DV-PETDM--LLKMIGQAESCRARCSEAL--RGSMSLKTVELLLQELGDFTVNMPELELL 973
E M L +++ E + L R S++T+E + E+ +P L
Sbjct: 919 HACVERTMARLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQL 978
Query: 974 KQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKK 1033
K S A WI D L GR + EL + + + ++ L +E + +
Sbjct: 979 KDCVSRAREWIMEA-DAL-QAGGRIPGLVTLSEL---VSRAKGIPVMLEALTRLESLISE 1033
Query: 1034 AHC-REKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADIL 1092
+E A K + + +V ++ K G++ + AD+
Sbjct: 1034 VQAWKESAAKTFLLRNSSLSLLEVLCPRCETGSQKSKSKKAKEGLVPC------KKADVK 1087
Query: 1093 IHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFLASAFAVAPASC 1150
+ + + E ++ S+D + +L +V + + S L+ N F +S +AP C
Sbjct: 1088 LDS--LFDVEKVLSTSKDTASAMATLSDVHQKELDSLSMLRTSNESKFQSSPSCLAPTVC 1145
Score = 84 (34.6 bits), Expect = 2.7e-17, Sum P(4) = 2.7e-17
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V +C+ C E L+C C D YH CL P D + + CP C
Sbjct: 275 VEQYICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKC 324
Score = 69 (29.3 bits), Expect = 5.3e-122, Sum P(5) = 5.3e-122
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 1390 PELEKVLSKVDKVENWKQRC-KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYI-YNKPHGS 1447
PE++K K++K N K+R KEI DK + +K S SL N
Sbjct: 1368 PEIKKEHEKLEK--NSKRRLEKEITEGQYRDK-----IKKKRTTSPSNSLSDPSNSDDSE 1420
Query: 1448 VSMTLCM---CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
++C C + + E+ ++ C +C +H C+ ++ E YIC C
Sbjct: 1421 EDWSVCSAKRCQQPEGNEVNWVQCDGSCNQWFHQVCVG-VSAEQAENEDYICVSC 1474
Score = 66 (28.3 bits), Expect = 6.8e-16, Sum P(4) = 6.8e-16
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGN-WYCLECLNSDK 298
ML C+ C +H C+ P K + G W C C S+K
Sbjct: 1155 MLQCELCRDAYHSGCV-PGFKDIQIGQPWLCPLCKRSEK 1192
Score = 64 (27.6 bits), Expect = 4.5e-119, Sum P(5) = 4.5e-119
Identities = 48/234 (20%), Positives = 96/234 (41%)
Query: 983 WIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL--PLVEVELKKAHCREKA 1040
W +++N IL +D + ++EL C+L E DL + +V C A
Sbjct: 726 WASKVNKIL---KADQDNKSDLEELRCLLAEAEKKMYPETDLLNDMRQVIQNADRCTIMA 782
Query: 1041 LKACDTKMPLDFIRQVTAEAVILQIEREKLFID--------------LSGVLAAAMRWEE 1086
+ + K + L +E + FI+ L +L ++++
Sbjct: 783 QQLLNGKRQTRYRSGGGKSQNQLTVEELRAFINKLYDLPCTIRQAPFLKALLNRVEQFQQ 842
Query: 1087 RAADILIHK-AQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAV 1145
++ D+L A + ++ + V LP L ++ + A+ W++ + AS
Sbjct: 843 QSFDMLAEDMAGSSALQGLLDEGAGLDVELPQLAVLRQRLEQAR-WVEAVQE--ASD--- 896
Query: 1146 APASCSLLRLESLKDLVSQSKFLKI-SLKEQT--ELEKVINNCERWQNHASSLL 1196
PA SL + ++ L+ Q L + E+T L++++ CE W+ A ++L
Sbjct: 897 QPADLSL---DCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNML 947
Score = 63 (27.2 bits), Expect = 2.3e-121, Sum P(5) = 2.3e-121
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 1713 CRKPY-DEKAMIACY-QCDEWYHIDCVKLLSAP---EIYICAAC 1751
C++P +E + C C++W+H CV + + E YIC +C
Sbjct: 1431 CQQPEGNEVNWVQCDGSCNQWFHQVCVGVSAEQAENEDYICVSC 1474
Score = 62 (26.9 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAEESSTPQ 1762
+C DE ++ C CD+ YH C+ L P+ + C C A+E PQ
Sbjct: 282 VCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL--AQECGKPQ 333
Score = 61 (26.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
D E++ +C ++C+ EV + CD CN+ +H C+ + ++ C+ C
Sbjct: 1418 DSEEDWS-VCSAKRCQQPEGNEVNWVQCDGSCNQWFHQVCVGVSAEQAENEDYICVSCAI 1476
Query: 296 SD 297
+D
Sbjct: 1477 ND 1478
Score = 57 (25.1 bits), Expect = 1.3e-119, Sum P(4) = 1.3e-119
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1752
C+C M+ C C + YH CV K + + ++C CK
Sbjct: 1145 CLCHT-VPAGPMLQCELCRDAYHSGCVPGFKDIQIGQPWLCPLCK 1188
Score = 54 (24.1 bits), Expect = 3.8e-109, Sum P(5) = 3.8e-109
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 1631 IQNYLKEGLLMNIS-PK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAE 1688
+Q L EG +++ P+ RQ+L + ++W + ++ LSLD + LI +
Sbjct: 858 LQGLLDEGAGLDVELPQLAVLRQRLEQ-----ARWVEAVQEASDQPADLSLDCMRRLIDQ 912
Query: 1689 GENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1721
G L + E R + +L +C ++EKA
Sbjct: 913 GVGLAPHACVERTMARLQELL-TVCEH-WEEKA 943
Score = 52 (23.4 bits), Expect = 5.3e-122, Sum P(5) = 5.3e-122
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 1214
L+ + L++ + +++ L E L VI RWQ+ + K I L +
Sbjct: 1195 LDKVLPLLASLQRIRVRLPEGDALRYVIERTVRWQHKVQQVSLPTLHPNGKVRI---LCS 1251
Query: 1215 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLED-- 1272
++ S + Q I SM++ G F L+ + S+ + + + +S LE+
Sbjct: 1252 NINSSMFQFIYSMQARHISG------FTSSQTLEGSNSSFYMLQPCIPLSELSAELEELL 1305
Query: 1273 VESLM 1277
VE L+
Sbjct: 1306 VEGLL 1310
Score = 49 (22.3 bits), Expect = 3.1e-111, Sum P(5) = 3.1e-111
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEK--ELKSLRARS 1707
+L EL + W + A ++ S++ + I E +++P YL +LK +R+
Sbjct: 928 RLQELLTVCEHWEEKAHNMLTARPRHSIETLEAAILEVDSIPAYLPSCLQLKDCVSRA 985
Score = 41 (19.5 bits), Expect = 5.4e-13, Sum P(3) = 5.4e-13
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 257 HGEVMLLCDRCNKGWHVYCLSPPLKHV 283
+G+V +LC N + S +H+
Sbjct: 1243 NGKVRILCSNINSSMFQFIYSMQARHI 1269
Score = 39 (18.8 bits), Expect = 3.8e-109, Sum P(5) = 3.8e-109
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 1399 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQK 1429
+++VE ++Q+ +++ + ++L GLL +
Sbjct: 834 LNRVEQFQQQSFDMLAEDMAGSSALQGLLDE 864
Score = 39 (18.8 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 1754 QAEESSTPQNVDGGRTNAEF--LEPK 1777
Q +E Q VDG ++ A F L+P+
Sbjct: 249 QVKEEPIVQPVDGEKSKATFGFLDPQ 274
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 926 (331.0 bits), Expect = 1.1e-120, Sum P(5) = 1.1e-120
Identities = 190/446 (42%), Positives = 267/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ + +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D R + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-VKDGRRKILPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C +K L YR+ L +L L V
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 226 (84.6 bits), Expect = 1.1e-120, Sum P(5) = 1.1e-120
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEMVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 139 (54.0 bits), Expect = 1.1e-120, Sum P(5) = 1.1e-120
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 986
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 987 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 1038
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 1039 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 1094
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 1095 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 1152
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 1205
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 1206 DDIGD-GLSNSLVSKIEQLI 1224
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 91 (37.1 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESV 1506
V + +CM C + E + L+C C D YH CL P D + + CP C E S+
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKCVAEECSKPR 349
Query: 1507 SQFG 1510
FG
Sbjct: 350 EAFG 353
Score = 78 (32.5 bits), Expect = 1.1e-120, Sum P(5) = 1.1e-120
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1761
C++P +K + C CDEW+H CV + ++ E YIC C K Q S P
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPVSPGP 1669
Score = 78 (32.5 bits), Expect = 9.4e-120, Sum P(4) = 9.4e-120
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 2.5e-114, Sum P(5) = 2.5e-114
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 1.7e-113, Sum P(5) = 1.7e-113
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 2.4e-112, Sum P(5) = 2.4e-112
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 943 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 998
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 999 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 1056
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 1057 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 1116
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 1117 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 1169
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 1170 ISLKEQTELEKVINNCERWQNHASSLL 1196
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 70 (29.7 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 1691 NLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI---- 1745
N+ + K S+ + C+ C + +E ++ C CD+ YH C+ + P++
Sbjct: 276 NMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGD 334
Query: 1746 YICAACKPQAEESSTPQNVDG 1766
+ C C AEE S P+ G
Sbjct: 335 WRCPKCV--AEECSKPREAFG 353
Score = 62 (26.9 bits), Expect = 2.3e-108, Sum P(3) = 2.3e-108
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1780 SPKHT 1784
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 1.1e-120, Sum P(5) = 1.1e-120
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 50 (22.7 bits), Expect = 1.5e-15, Sum P(4) = 1.5e-15
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 239 VDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
VD+ +E+ IC + SG ML C+ C +H C+ P
Sbjct: 1155 VDRIEEVKFCICRKTASGF----MLQCELCKDWFHNSCVPLP 1192
Score = 50 (22.7 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ D+ + +C + C+ +V + CD C++ +H C+ + ++ C+ C
Sbjct: 1601 EESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINC 1658
Score = 47 (21.6 bits), Expect = 4.2e-110, Sum P(4) = 4.2e-110
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 1.5e-119, Sum P(5) = 1.5e-119
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 1.8e-109, Sum P(4) = 1.8e-109
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 1244 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 1299
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 1300 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 1359
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 1360 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 1417
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 1418 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1474
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1475 YHLQC 1479
+ LQC
Sbjct: 1173 FMLQC 1177
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1668 KKVVLDSGAL-SLDKVFELIAEGE 1690
++ V+ G L S ++VFEL+ + E
Sbjct: 650 RESVVQMGVLMSEEEVFELVPDDE 673
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 924 (330.3 bits), Expect = 1.8e-120, Sum P(5) = 1.8e-120
Identities = 188/446 (42%), Positives = 264/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP+ R + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFPKKDGQRKMLPEEE---EYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C + L YR+ L +L L V
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 221 (82.9 bits), Expect = 1.8e-120, Sum P(5) = 1.8e-120
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ +F F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEVKTFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEIVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 144 (55.7 bits), Expect = 1.8e-120, Sum P(5) = 1.8e-120
Identities = 89/382 (23%), Positives = 171/382 (44%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 982
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 983 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 1037 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 1092
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 1093 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 1150
+ + M E+I+ +++I LP++ ++ + A+ W E A+ +
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGN- 1015
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 1204
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 1205 -KDDIGD-GLSNSLVSKIEQLI 1224
+ DIG G + K++++I
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEII 1097
Score = 91 (37.1 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGD-WRCPKC 340
Score = 78 (32.5 bits), Expect = 1.8e-120, Sum P(5) = 1.8e-120
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1758
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSAEMAENEDYICINCAKKQGPDS 1666
Score = 78 (32.5 bits), Expect = 1.6e-119, Sum P(4) = 1.6e-119
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 76 (31.8 bits), Expect = 2.3e-113, Sum P(5) = 2.3e-113
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 44/158 (27%), Positives = 65/158 (41%)
Query: 1631 IQNYLKEGLLMNISPKDHYRQKLM----ELNRIGS----QWADVAKKVV-LDSGALSLDK 1681
IQ + G MNI PK R K E+NR Q KVV L GA DK
Sbjct: 201 IQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQIFGAGPKVVGLAVGAK--DK 258
Query: 1682 VFELI--------AEGENLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWY 1732
E+ ++ N+ + K S+ + C+ C + +E ++ C CD+ Y
Sbjct: 259 EDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSY 318
Query: 1733 HIDCVKLLSAPEI----YICAACKPQAEESSTPQNVDG 1766
H C+ L P++ + C C AEE + P+ G
Sbjct: 319 HTFCL-LPPLPDVPKGDWRCPKCV--AEECNKPREAFG 353
Score = 64 (27.6 bits), Expect = 4.1e-112, Sum P(5) = 4.1e-112
Identities = 46/271 (16%), Positives = 124/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ + L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 59 (25.8 bits), Expect = 4.0e-110, Sum P(5) = 4.0e-110
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 1520 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTC--LTDIV--KFESCYLDKDL 1575
+ DL L +L D+E R D+ +++ D E +TC + ++ K + D
Sbjct: 757 KKDLIELRVMLEDAED--RKYPENDLFRKLRDAVKEAETCGSVAQLLLSKKQKHRQSSDS 814
Query: 1576 HVISNKLTIT-LKA--REAAGV-----FDRQSNSALDFALARNLWRVRVSKLLEGLTKPT 1627
KLT+ LKA ++ + RQ + LD + R + + T P
Sbjct: 815 GKTRTKLTVEELKAFVQQLVSLPCVISQTRQVKNLLDDV---EEFHERAQEAMMDET-PD 870
Query: 1628 IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIA 1687
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 871 SSKLQMLIDMGSSLYVELPELPRLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLID 927
Query: 1688 EGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1727
G L + E K++ L + + ++EKA + C Q
Sbjct: 928 SGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 964
Score = 58 (25.5 bits), Expect = 9.9e-107, Sum P(4) = 9.9e-107
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYC 1711
+L EL + +W + AK + S+ + ++ E +N+P +L L SL+
Sbjct: 944 ELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA----- 997
Query: 1712 ICRKPYDEKAMIACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGR 1768
+K + A + Q Y +++ ++ LSA I + PQ E R
Sbjct: 998 -LQKAREWTAKVEAIQSGNNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRER 1056
Query: 1769 TNAEFLEPKTPSPKHT 1784
T FL+ K S HT
Sbjct: 1057 TGRTFLK-KNSS--HT 1069
Score = 57 (25.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
++ D+ + +C + C+ +V + CD C++ +H C+ + ++ C+ C
Sbjct: 1601 EESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSAEMAENEDYICINCAK 1660
Query: 296 SD-KDSFGFVP 305
DS G P
Sbjct: 1661 KQGPDSPGQAP 1671
Score = 56 (24.8 bits), Expect = 8.2e-110, Sum P(5) = 8.2e-110
Identities = 84/387 (21%), Positives = 152/387 (39%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 943 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 998
A++ + +E L + L +P L+ L Q S A W R + N
Sbjct: 1010 AIQSGNNYAYLEQL-ESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 999 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 1056
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEESRD- 1122
Query: 1057 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 1116
TA V + ERE+ I+ L AA A ++ + + +F I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAA----NLAKMTIVERIEEVKF-CICRKTASGFMLQC 1177
Query: 1117 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 1169
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 1170 ISLKEQTELEKVINNCERWQNHASSLL 1196
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDKARQAL 1264
Score = 53 (23.7 bits), Expect = 1.8e-120, Sum P(5) = 1.8e-120
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLC 1215
Score = 48 (22.0 bits), Expect = 1.9e-109, Sum P(4) = 1.9e-109
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDKARQALA 1265
Score = 46 (21.3 bits), Expect = 9.6e-15, Sum P(4) = 9.6e-15
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
IC + SG ML C+ C +H C+ P
Sbjct: 1165 ICRKTASGF----MLQCELCKDWFHNSCVPLP 1192
Score = 42 (19.8 bits), Expect = 8.2e-110, Sum P(5) = 8.2e-110
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 1347 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 1394
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 878
Score = 39 (18.8 bits), Expect = 5.3e-119, Sum P(5) = 5.3e-119
Identities = 13/60 (21%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ + ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDKARQALATD--ELSSALAKLSVLSQ 1281
Score = 39 (18.8 bits), Expect = 4.0e-110, Sum P(5) = 4.0e-110
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 1388 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 1436
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 38 (18.4 bits), Expect = 6.7e-119, Sum P(5) = 6.7e-119
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1461 KELEFLICSACKDCYHLQC 1479
+E++F IC + LQC
Sbjct: 1159 EEVKFCICRKTASGFMLQC 1177
Score = 37 (18.1 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 1655 ELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGE 1690
EL + + + + VV +S ++VFEL+ + E
Sbjct: 638 ELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDE 673
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 923 (330.0 bits), Expect = 1.9e-120, Sum P(5) = 1.9e-120
Identities = 188/446 (42%), Positives = 266/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAIREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + D + + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-IKDGQRKMLPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVV----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C + L YR+ L +L L V
Sbjct: 707 CSCPMQNKCLRYRYPLEDLPSLLYGV 732
Score = 221 (82.9 bits), Expect = 1.9e-120, Sum P(5) = 1.9e-120
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ +F F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKTFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEIVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 148 (57.2 bits), Expect = 1.9e-120, Sum P(5) = 1.9e-120
Identities = 96/409 (23%), Positives = 181/409 (44%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W + V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVNRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEAL-------RGSMSLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 982
+AE+C + L + S S KT +L ++EL F + L ++ Q
Sbjct: 790 EAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ---- 845
Query: 983 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
+ L D + + R Q ++DE L ++ G+SL +++ +LP ++ EL++A
Sbjct: 846 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQVLIDMGSSLYVELPELPRLKQELQQARW 903
Query: 1037 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADIL 1092
++ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 904 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCL 963
Query: 1093 IHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASC 1150
+ + M E+I+ +++I LP++ ++ + A+ W E A+ S
Sbjct: 964 QARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS- 1015
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD--- 1204
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1016 NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLS 1075
Query: 1205 -KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNA 1250
+ DIG G + K++++I E + L D E + E ++A
Sbjct: 1076 PRTDIGVYGSGKNRRKKVKEIIEK-EKEKDLDLEPLSDLEEGLEETRDA 1123
Score = 91 (37.1 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGD-WRCPKC 340
Score = 78 (32.5 bits), Expect = 1.9e-120, Sum P(5) = 1.9e-120
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1758
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1615 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1666
Score = 77 (32.2 bits), Expect = 1.0e-119, Sum P(4) = 1.0e-119
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNGCVPL 1191
Score = 77 (32.2 bits), Expect = 4.9e-113, Sum P(5) = 4.9e-113
Identities = 30/144 (20%), Positives = 62/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL S ++ E + VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCLQARPRHSM---ANLENI----VNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 44/158 (27%), Positives = 65/158 (41%)
Query: 1631 IQNYLKEGLLMNISPKDHYRQKLM----ELNRIGS----QWADVAKKVV-LDSGALSLDK 1681
IQ + G MNI PK R K E+NR Q KVV L GA DK
Sbjct: 201 IQPSPERGTRMNIPPKRTRRVKSQSDSGEVNRNTELKKLQIFGAGPKVVGLAVGAK--DK 258
Query: 1682 VFELI--------AEGENLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWY 1732
E+ ++ N+ + K S+ + C+ C + +E ++ C CD+ Y
Sbjct: 259 EDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSY 318
Query: 1733 HIDCVKLLSAPEI----YICAACKPQAEESSTPQNVDG 1766
H C+ L P++ + C C AEE + P+ G
Sbjct: 319 HTFCL-LPPLPDVPKGDWRCPKCV--AEECNKPREAFG 353
Score = 66 (28.3 bits), Expect = 6.8e-112, Sum P(5) = 6.8e-112
Identities = 47/271 (17%), Positives = 123/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ VL + S
Sbjct: 823 VEELKAFVQQLVSLPCVISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H++ + L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSMAN-LENIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 60 (26.2 bits), Expect = 1.6e-106, Sum P(4) = 1.6e-106
Identities = 53/245 (21%), Positives = 95/245 (38%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQTRQVKNLLDDVEEFHERAQEAMMDETPDSSKLQVLIDMGSSLYV-ELPELPRLKQE 897
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1780 SPKHT 1784
S HT
Sbjct: 1067 S--HT 1069
Score = 57 (25.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
++ D+ + +C + C+ +V + CD C++ +H C+ + ++ C+ C
Sbjct: 1601 EESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAK 1660
Query: 296 SD-KDSFGFVP 305
DS G P
Sbjct: 1661 KQGPDSPGHAP 1671
Score = 56 (24.8 bits), Expect = 5.2e-110, Sum P(5) = 5.2e-110
Identities = 79/385 (20%), Positives = 146/385 (37%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA ++ +P L + + +A A+
Sbjct: 953 ERWEEKAKVCLQAR-PRHSMAN-LENIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEA 1010
Query: 943 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 1000
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1011 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1070
Query: 1001 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 1058
V+ I G + R +V ++ +E E +K E D + L+ R
Sbjct: 1071 LQVLSPRTDIGVYGSGKNRRKKVKEI--IEKEKEKDLDLEPL---SDLEEGLEETRDAAM 1125
Query: 1059 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 1118
+ + ERE+ I+ L AA + D I + + C I R + F++ L
Sbjct: 1126 VVAVFK-EREQKEIEAMHSLRAANLAKMTIVD-RIEEVKFC----ICRKTASGFMLQCEL 1179
Query: 1119 --DEVQN---EISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 1171
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1180 CKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1239
Query: 1172 LKEQTELEKVINNCERWQNHASSLL 1196
L E L+ + WQ+ A L
Sbjct: 1240 LPEGEALQCLTERAMSWQDRARQAL 1264
Score = 50 (22.7 bits), Expect = 1.9e-120, Sum P(5) = 1.9e-120
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLC 1215
Score = 49 (22.3 bits), Expect = 6.0e-15, Sum P(4) = 6.0e-15
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 239 VDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
VD+ +E+ IC + SG ML C+ C +H C+ P
Sbjct: 1155 VDRIEEVKFCICRKTASGF----MLQCELCKDWFHNGCVPLP 1192
Score = 47 (21.6 bits), Expect = 3.1e-109, Sum P(4) = 3.1e-109
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 1.3e-119, Sum P(5) = 1.3e-119
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 42 (19.8 bits), Expect = 2.2e-109, Sum P(5) = 2.2e-109
Identities = 30/153 (19%), Positives = 67/153 (43%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVNRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRKLR 785
Query: 1347 SAIQKHK---------LWQEQVHQFFNLKCAQQSWSLMLQLKE-LGEAAAFDC--PELEK 1394
A+++ + L ++Q H+ + ++ + +LK + + + C + +
Sbjct: 786 DAVKEAETCGSVAQLLLSKKQKHRQSSDSGKTRTKLTVEELKAFVQQLVSLPCVISQTRQ 845
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQVLI 878
Score = 39 (18.8 bits), Expect = 4.5e-109, Sum P(5) = 4.5e-109
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 1388 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 1436
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 724 DLPSLLYGVKVRAQSYDTWVNRVTEALSASFNHKKDLIELRVMLEDAEDR 773
Score = 39 (18.8 bits), Expect = 2.1e-108, Sum P(4) = 2.1e-108
Identities = 47/245 (19%), Positives = 97/245 (39%)
Query: 1244 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 1299
++ELQ + W +KA L P S+ ++E+++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSMANLENIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 1300 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 1359
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1057
Query: 1360 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGD 1419
+ F LK S +L+ L + + + + KV ++ K++ K++ + D
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRR--KKVKEIIE-KEKEKDLDLEPLSD 1112
Query: 1420 KNSLLGLLQKIKQSV----HRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1474
L + V R H + L D +E++F IC
Sbjct: 1113 LEEGLEETRDAAMVVAVFKEREQKEIEAMHSLRAANLAKMTIVDRIEEVKFCICRKTASG 1172
Query: 1475 YHLQC 1479
+ LQC
Sbjct: 1173 FMLQC 1177
Score = 39 (18.8 bits), Expect = 6.0e-13, Sum P(4) = 6.0e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 1655 ELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGE 1690
EL + + + + VV +S ++VFEL+ + E
Sbjct: 638 ELTLMTEEETRLRESVVQMGVVMSEEEVFELVPDDE 673
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 935 (334.2 bits), Expect = 2.3e-120, Sum P(5) = 2.3e-120
Identities = 185/442 (41%), Positives = 267/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 370
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 371 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 430
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 431 SKEFGSGFP-VRDGKIKLSPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 487
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 488 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPD 547
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 548 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 607
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 608 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 667
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ C+ C+ ++SA++C C+P VCL H + L
Sbjct: 668 TVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKEL 722
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K L YR+TL +LY +
Sbjct: 723 CSCPPYKYKLRYRYTLDDLYPM 744
Score = 196 (74.1 bits), Expect = 2.3e-120, Sum P(5) = 2.3e-120
Identities = 45/127 (35%), Positives = 72/127 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 33 PVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNE 92
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + +++ E G+ L K E + LDL +L GG+ V K
Sbjct: 93 LEAQTRV--KLNFLDQIAKYW-ELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCK 148
Query: 151 EKKWGEV 157
++KW ++
Sbjct: 149 DRKWTKI 155
Score = 121 (47.7 bits), Expect = 2.3e-120, Sum P(5) = 2.3e-120
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 991 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 1041
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 866 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 924
Query: 1042 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 1097
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 925 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 984
Query: 1098 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 1155
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 985 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 1036
Query: 1156 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 1192
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 1037 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 1073
Score = 95 (38.5 bits), Expect = 3.0e-16, Sum P(4) = 3.0e-16
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
K +V + +C+ C S + E L+C C D YH CL P D + + CP C E
Sbjct: 302 KATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 360
Query: 1503 -SESVSQFG 1510
S+ FG
Sbjct: 361 CSKPQEAFG 369
Score = 84 (34.6 bits), Expect = 2.3e-120, Sum P(5) = 2.3e-120
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 1375 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 1434
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 1098 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 1155
Query: 1435 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1489
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 1156 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1212
Query: 1490 AEAYICPYCQYFE 1502
++CP+C+ E
Sbjct: 1213 LRIWLCPHCRRSE 1225
Score = 80 (33.2 bits), Expect = 4.5e-116, Sum P(5) = 4.5e-116
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 889 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 942
Query: 1160 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
DL V + + + K L++++ E W + A SLL+
Sbjct: 943 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 980
Score = 77 (32.2 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K+ A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 302 KATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCL--AQ 359
Query: 1757 ESSTPQNVDG 1766
E S PQ G
Sbjct: 360 ECSKPQEAFG 369
Score = 73 (30.8 bits), Expect = 2.3e-120, Sum P(5) = 2.3e-120
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 1677 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1729
L ++ +EL+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1451 LERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1510
Query: 1730 EWYHIDCVKL---LSAPEIYICAAC 1751
+W+H CV + ++ E YIC C
Sbjct: 1511 QWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 71 (30.1 bits), Expect = 9.6e-116, Sum P(4) = 9.6e-116
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1632 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1691
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 1105 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1158
Query: 1692 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1747
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1159 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1217
Query: 1748 CAACK 1752
C C+
Sbjct: 1218 CPHCR 1222
Score = 71 (30.1 bits), Expect = 3.7e-113, Sum P(5) = 3.7e-113
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1286
Score = 68 (29.0 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 240 DKEDELDQICE--QCKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
D EDE D IC C EV + CD CN+ +H C+ + + ++ C+ C
Sbjct: 1479 DSEDE-DAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTV 1537
Query: 296 SDKDS 300
D S
Sbjct: 1538 KDAPS 1542
Score = 65 (27.9 bits), Expect = 1.6e-114, Sum P(5) = 1.6e-114
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 998 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 1056
Query: 873 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 906
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 1057 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 1090
Score = 63 (27.2 bits), Expect = 2.7e-114, Sum P(5) = 2.7e-114
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 898
Query: 912 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 967
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 899 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 955
Query: 968 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 1021
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 956 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 1014
Score = 63 (27.2 bits), Expect = 5.5e-108, Sum P(4) = 5.5e-108
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1670
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 919 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 978
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYL 1696
+ SL+ + + E E +P YL
Sbjct: 979 LKARPRHSLNSLATAVKEIEEIPAYL 1004
Score = 62 (26.9 bits), Expect = 7.0e-108, Sum P(4) = 7.0e-108
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1618 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1677
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 878 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 933
Query: 1678 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1721
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 934 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 975
Score = 62 (26.9 bits), Expect = 9.5e-16, Sum P(4) = 9.5e-16
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDK 298
M+ C+ C +H C++ P W C C S+K
Sbjct: 1189 MIQCELCRDAFHTSCVAVPSISQGLRIWLCPHCRRSEK 1226
Score = 58 (25.5 bits), Expect = 1.0e-109, Sum P(5) = 1.0e-109
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1110 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1161
Query: 876 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 933
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1162 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1218
Query: 934 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
Query: 994 IN 995
N
Sbjct: 1273 GN 1274
Score = 56 (24.8 bits), Expect = 4.3e-114, Sum P(5) = 4.3e-114
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1505
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1542
Score = 55 (24.4 bits), Expect = 1.8e-113, Sum P(5) = 1.8e-113
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 1198
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 837 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 882
Score = 51 (23.0 bits), Expect = 2.4e-109, Sum P(4) = 2.4e-109
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1679 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1728
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 1036 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 1094
Query: 1729 D 1729
D
Sbjct: 1095 D 1095
Score = 45 (20.9 bits), Expect = 1.9e-110, Sum P(5) = 1.9e-110
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 1182
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 43 (20.2 bits), Expect = 1.5e-18, Sum P(5) = 1.5e-18
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 886 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 923
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 216 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 248
Score = 41 (19.5 bits), Expect = 7.2e-116, Sum P(5) = 7.2e-116
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 1443
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1305
Query: 1444 -PHGSVSMTL 1452
P G+ S +L
Sbjct: 1306 QPPGTTSFSL 1315
Score = 39 (18.8 bits), Expect = 3.8e-18, Sum P(5) = 3.8e-18
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 172 RGHYERILNPYNLFLS-GDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARR 230
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 231 AKRMRAEAMNIKIEPEE 247
Score = 38 (18.4 bits), Expect = 1.1e-111, Sum P(5) = 1.1e-111
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 38 (18.4 bits), Expect = 3.0e-107, Sum P(4) = 3.0e-107
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 37 (18.1 bits), Expect = 1.3e-109, Sum P(5) = 1.3e-109
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 926 (331.0 bits), Expect = 5.6e-120, Sum P(4) = 5.6e-120
Identities = 190/446 (42%), Positives = 267/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ + +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D R + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-VKDGRRKILPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C +K L YR+ L +L L V
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 226 (84.6 bits), Expect = 5.6e-120, Sum P(4) = 5.6e-120
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEMVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 139 (54.0 bits), Expect = 5.6e-120, Sum P(4) = 5.6e-120
Identities = 88/380 (23%), Positives = 171/380 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 986
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 987 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 1038
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 905
Query: 1039 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 1094
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 906 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 965
Query: 1095 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 1152
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 1017
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----K 1205
LE L+ L ++ + + + L+ ++E + W+ + L+ + LL +
Sbjct: 1018 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPR 1077
Query: 1206 DDIGD-GLSNSLVSKIEQLI 1224
DIG G + K+++LI
Sbjct: 1078 TDIGVYGSGKNRRKKVKELI 1097
Score = 91 (37.1 bits), Expect = 9.4e-19, Sum P(4) = 9.4e-19
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESV 1506
V + +CM C + E + L+C C D YH CL P D + + CP C E S+
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKCVAEECSKPR 349
Query: 1507 SQFG 1510
FG
Sbjct: 350 EAFG 353
Score = 78 (32.5 bits), Expect = 5.6e-120, Sum P(4) = 5.6e-120
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1157 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1191
Score = 78 (32.5 bits), Expect = 1.4e-113, Sum P(4) = 1.4e-113
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 941 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 990
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 991 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 1050
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1051 RAWRERTGRTFLKKNSSHTLLQVL 1074
Score = 70 (29.7 bits), Expect = 9.6e-113, Sum P(4) = 9.6e-113
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 882
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 883 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 934
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 935 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 992
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 993 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 1051
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 1052 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 1082
Score = 70 (29.7 bits), Expect = 5.7e-109, Sum P(4) = 5.7e-109
Identities = 87/387 (22%), Positives = 151/387 (39%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 894 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 952
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 953 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKV-E 1009
Query: 943 ALRGSMSLKTVELLLQELGDFTVNMP-ELELLKQYHSD---AIFWIARLNDILVNINGRK 998
A++ + +E L + L +P LE L Q S A W R + N
Sbjct: 1010 AIQSGSNYAYLEQL-ESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSH 1068
Query: 999 DQHNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQV 1056
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1069 TLLQVLSPRTDIGVYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD- 1122
Query: 1057 TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLP 1116
TA V + ERE+ I+ L AA + D I + + C I R + F++
Sbjct: 1123 TAMVVAVFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQC 1177
Query: 1117 SL--DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLK 1169
L D N + + S K S + P R LE++ L+ + L
Sbjct: 1178 ELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLP 1237
Query: 1170 ISLKEQTELEKVINNCERWQNHASSLL 1196
+ L E L+ + WQ+ A L
Sbjct: 1238 VRLPEGEALQCLTERAMSWQDRARQAL 1264
Score = 70 (29.7 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 1691 NLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI---- 1745
N+ + K S+ + C+ C + +E ++ C CD+ YH C+ + P++
Sbjct: 276 NMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGD 334
Query: 1746 YICAACKPQAEESSTPQNVDG 1766
+ C C AEE S P+ G
Sbjct: 335 WRCPKCV--AEECSKPREAFG 353
Score = 62 (26.9 bits), Expect = 1.6e-108, Sum P(3) = 1.6e-108
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 897
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 898 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 954
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 955 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 1007
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1008 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 1066
Query: 1780 SPKHT 1784
S HT
Sbjct: 1067 S--HT 1069
Score = 53 (23.7 bits), Expect = 2.3e-117, Sum P(4) = 2.3e-117
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1164 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 50 (22.7 bits), Expect = 3.7e-12, Sum P(3) = 3.7e-12
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 239 VDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
VD+ +E+ IC + SG ML C+ C +H C+ P
Sbjct: 1155 VDRIEEVKFCICRKTASGF----MLQCELCKDWFHNSCVPLP 1192
Score = 47 (21.6 bits), Expect = 5.9e-107, Sum P(3) = 5.9e-107
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1227 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1265
Score = 42 (19.8 bits), Expect = 3.3e-116, Sum P(4) = 3.3e-116
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1228 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1281
Score = 41 (19.5 bits), Expect = 1.1e-109, Sum P(4) = 1.1e-109
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 1244 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 1299
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 942 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKA 1001
Query: 1300 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 1359
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1002 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLEA-LPQVESQVAAARAWRERT 1057
Query: 1360 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 1417
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1058 GRTF-LK-KNSSHTLLQVLSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1115
Query: 1418 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1474
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1116 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1172
Query: 1475 YHLQC 1479
+ LQC
Sbjct: 1173 FMLQC 1177
Score = 39 (18.8 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 9.4e-19, Sum P(4) = 9.4e-19
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1668 KKVVLDSGAL-SLDKVFELIAEGE 1690
++ V+ G L S ++VFEL+ + E
Sbjct: 650 RESVVQMGVLMSEEEVFELVPDDE 673
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 942 (336.7 bits), Expect = 5.8e-120, Sum P(4) = 5.8e-120
Identities = 196/467 (41%), Positives = 277/467 (59%)
Query: 229 DQERVKVCHKVDKEDE-LD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG 286
+QER K + K +D +C C SG + +LLCD C+ +H +CL PPL VP+G
Sbjct: 265 EQERDKAKARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKG 324
Query: 287 NWYCLECL----NSDKDSFGFVPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKK 339
+W C +CL N +++FGF R YT+ +F +AD K F +EK+
Sbjct: 325 DWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE 384
Query: 340 FWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDH----RPESVDANVWNEYCNSPWNLN 395
FW +V +V V YG+D+ + +GSGFP V D RPE EY +S WNLN
Sbjct: 385 FWRLVSTIEEDVTVEYGADIASKEFGSGFP-VRDGKFKVRPEE------EEYLDSGWNLN 437
Query: 396 NLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV 455
N+P ++ S+L + +I G+ +PWLY+GM FS+FCWH EDH YS+NY HWG+PK WY
Sbjct: 438 NMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGA 497
Query: 456 PGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITF 515
PG A E VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITF
Sbjct: 498 PGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITF 557
Query: 516 PRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD- 573
PR+YH+GFN G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D
Sbjct: 558 PRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADI 617
Query: 574 LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQ 633
LD V+ +++++ + E+M RE++ + G+ S + P+ ++ C C+
Sbjct: 618 LDVVVASTVQKDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKT 672
Query: 634 YLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
++SAV C C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 673 TCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 719
Score = 208 (78.3 bits), Expect = 5.8e-120, Sum P(4) = 5.8e-120
Identities = 48/127 (37%), Positives = 72/127 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 11 PVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNE 70
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + ++F E G L K E + LDL +L GG+D V K
Sbjct: 71 LEAQTRV--KLNFLDQIAKFW-ELQGCTL-KIPHVERKILDLFQLNRLVAEEGGFDVVCK 126
Query: 151 EKKWGEV 157
E+KW ++
Sbjct: 127 ERKWTKI 133
Score = 130 (50.8 bits), Expect = 5.8e-120, Sum P(4) = 5.8e-120
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 723 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 780
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 781 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 840
Query: 991 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 1042
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 841 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 900
Query: 1043 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 1097
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 901 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 960
Query: 1098 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 961 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1012
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 1209
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1013 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1072
Query: 1210 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 1267
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1073 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1125
Query: 1268 PSLEDVESLMAVAEG 1282
+E + SL A EG
Sbjct: 1126 KEMEALRSLRAANEG 1140
Score = 102 (41.0 bits), Expect = 3.7e-20, Sum P(4) = 3.7e-20
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 277 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 331
Score = 81 (33.6 bits), Expect = 5.8e-120, Sum P(4) = 5.8e-120
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1651 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1708
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1098 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1153
Query: 1709 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1752
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1154 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1197
Score = 80 (33.2 bits), Expect = 5.4e-117, Sum P(5) = 5.4e-117
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 814 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 871
Query: 912 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 967
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 872 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 930
Query: 968 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 1021
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 931 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 989
Query: 1022 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 1079
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 990 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1039
Query: 1080 AAMRWEERAADILI 1093
W+E AA+ +
Sbjct: 1040 EVQAWKECAANTFL 1053
Score = 76 (31.8 bits), Expect = 2.3e-113, Sum P(4) = 2.3e-113
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 1213
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 751 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 809
Query: 1214 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 1273
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 810 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 865
Query: 1274 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 1333
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 866 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 922
Query: 1334 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 1390
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 923 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 980
Query: 1391 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 1429
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 981 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1020
Score = 72 (30.4 bits), Expect = 2.1e-119, Sum P(5) = 2.1e-119
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1713 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1513
Score = 72 (30.4 bits), Expect = 5.4e-117, Sum P(5) = 5.4e-117
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1204 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1261
Score = 71 (30.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 277 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCL--AQ 334
Query: 1757 ESSTPQNVDG 1766
E + PQ G
Sbjct: 335 ECNKPQEAFG 344
Score = 67 (28.6 bits), Expect = 1.6e-17, Sum P(4) = 1.6e-17
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGN--WYCLECLNSDK 298
M+ C+ C +H C+S P H +G W C +C S+K
Sbjct: 1164 MIQCELCRGFFHTGCVSVP--HALQGPRVWLCPQCRRSEK 1201
Score = 65 (27.9 bits), Expect = 2.9e-109, Sum P(4) = 2.9e-109
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1608 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1665
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 950 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 997
Query: 1666 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1715
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 998 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1057
Query: 1716 PYDEKAMIACYQCD 1729
PY ++ C +CD
Sbjct: 1058 PYSLLEVL-CPRCD 1070
Score = 63 (27.2 bits), Expect = 2.7e-112, Sum P(5) = 2.7e-112
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 935 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 979
Score = 59 (25.8 bits), Expect = 1.2e-115, Sum P(5) = 1.2e-115
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1077 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 1125
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1230 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1288
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 1182
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1289 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1345
Score = 59 (25.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 240 DKEDELDQICEQ--CKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D EDE D IC C EV + CD CN+ +H C+ + + ++ C C
Sbjct: 1457 DSEDE-DAICPAVTCLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1513
Score = 58 (25.5 bits), Expect = 1.1e-114, Sum P(5) = 1.1e-114
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 973 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1031
Query: 873 EKLSQRISSAKVWRD 887
+L ++ + W++
Sbjct: 1032 PRLESLVAEVQAWKE 1046
Score = 57 (25.1 bits), Expect = 1.9e-117, Sum P(4) = 1.9e-117
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1470 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1513
Score = 47 (21.6 bits), Expect = 2.2e-107, Sum P(4) = 2.2e-107
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 892 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 949
Query: 1721 A 1721
A
Sbjct: 950 A 950
Score = 45 (20.9 bits), Expect = 2.1e-119, Sum P(5) = 2.1e-119
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 1445
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1222 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1280
Query: 1446 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1494
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1281 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1330
Score = 44 (20.5 bits), Expect = 2.7e-112, Sum P(5) = 2.7e-112
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + +K SL+ I++S
Sbjct: 718 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 761
Score = 41 (19.5 bits), Expect = 6.4e-113, Sum P(5) = 6.4e-113
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 783 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 840
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 985 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1039
Query: 841 EINA 844
E+ A
Sbjct: 1040 EVQA 1043
Score = 40 (19.1 bits), Expect = 3.4e-111, Sum P(6) = 3.4e-111
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 940 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 995
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1193 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1249
Score = 40 (19.1 bits), Expect = 1.4e-109, Sum P(5) = 1.4e-109
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 830 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 887
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1236 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1293
Query: 888 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 935
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1294 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
Score = 38 (18.4 bits), Expect = 5.5e-111, Sum P(6) = 5.5e-111
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 916 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 950
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1217 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1252
Score = 37 (18.1 bits), Expect = 2.4e-113, Sum P(5) = 2.4e-113
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 1130
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1320 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1350
Score = 37 (18.1 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1716 PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYIC 1748
P DE+ CY+C + V P + +C
Sbjct: 661 PDDERQ---CYKCKTTCFMSAVYCPCKPGLLVC 690
Score = 37 (18.1 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 252 CKSGLHGEVMLLCDRCNKG 270
C++ + + +LC RC+ G
Sbjct: 1054 CENSPYSLLEVLCPRCDIG 1072
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 926 (331.0 bits), Expect = 9.7e-120, Sum P(4) = 9.7e-120
Identities = 191/460 (41%), Positives = 271/460 (58%)
Query: 228 CDQERVKVCHKVDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG 286
C + +++ ++ +D +C C G E ++LCD C+ +H +CL PPL P+G
Sbjct: 339 CTKMTMRLRRNLNNPQFVDSFVCRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLTDPPKG 398
Query: 287 NWYCLECLNSD----KDSFGFVPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKK 339
NW C +C+ + ++FGF R YT++SF +AD K F +EK+
Sbjct: 399 NWRCPKCVAEECKKPSEAFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEKE 458
Query: 340 FWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPK 399
FW +V +V V YG+D+ + +GSGFP R S + EY S WNLN +P
Sbjct: 459 FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNGKRQLSEEEE---EYARSGWNLNVMPV 515
Query: 400 LKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSE 459
L+ S+L ++ +I+G+ VPWLY+GM+FSAFCWH EDH YS+NY HWG+PK WY VP S
Sbjct: 516 LEQSLLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPCSA 575
Query: 460 AGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSY 519
A E+VM+ P+LF+ QPDLL QLVT++NP++L+ +GVPV Q G FVITFPR+Y
Sbjct: 576 AEKLEEVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAY 635
Query: 520 HAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSK 577
H+GFN G N AEAVNF ADWLP G + Y+Q + V S EEL C +A LD
Sbjct: 636 HSGFNQGYNFAEAVNFCTADWLPTGRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLN 695
Query: 578 VSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYL 637
++ RE+ + +ER R+ L +GI ++ R+ E + +++ C C+ +L
Sbjct: 696 LAAATHREMFIIVQEERKLRKSLLERGIKEAE----REAFELL-PDDERQCDKCKTTCFL 750
Query: 638 SAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 677
SA+AC P VCL H + LC C + KL+L YR+TL EL
Sbjct: 751 SALACSNCPERLVCLYHAQDLCSCPSEKLYLRYRYTLDEL 790
Score = 218 (81.8 bits), Expect = 9.7e-120, Sum P(4) = 9.7e-120
Identities = 52/130 (40%), Positives = 73/130 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEVDNFHFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEY-SRFLK--EHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L+A + +L Y R K E G+ L K E LDL L GG++
Sbjct: 75 LEAETRV------KLNYLDRIAKFWEIQGSSL-KIPNLERRILDLFSLAKIVTEEGGFES 127
Query: 148 VVKEKKWGEV 157
V KE++W V
Sbjct: 128 VSKERRWARV 137
Score = 158 (60.7 bits), Expect = 9.7e-120, Sum P(4) = 9.7e-120
Identities = 89/367 (24%), Positives = 153/367 (41%)
Query: 845 ALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEID 904
A CS SE L R + L + +L R S W + V++ + I+I
Sbjct: 768 AQDLCSCPSEKLYLRYRYT-LDELLAMLHRLKVRAESFDSWANRVKEALEQDEGNKIDIK 826
Query: 905 VLYKLESEALDLKIDVPETDMLLKMIG-QAESCRARCSEALRGSMSLKTVELLLQELGDF 963
L L+ EA D K E L + E C + +E L S S + L+ L D
Sbjct: 827 DLEVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTELLSNSQSSRMTLKELKTLVDT 886
Query: 964 TVNMP-------ELELLKQYHSDAIFWIARLNDILVNINGRKDQHN---VIDELNCILKE 1013
N+P E++L+ Q + + +R ++ + Q + V E+ +L+E
Sbjct: 887 MQNLPCVIKQQDEVQLILQKIEE---FDSRAQVLVDSTKSEWKQDSPLPVATEIQALLEE 943
Query: 1014 GASLRIQVDDLPLVEVELKKAHCR---EKALKACDTKMPLDFIRQVTAEA--VILQIERE 1068
GASL + L+ L++ + L +++ L +R + V + E
Sbjct: 944 GASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEGSEVTLTVLRNLMESGCNVPQSVSVE 1003
Query: 1069 KLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEIS 1126
+L +L A RWEE+A L K + E I+ +Q I V LP++ +Q +S
Sbjct: 1004 TAMAELQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLS 1063
Query: 1127 TAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 1186
A++W+ + E P C L+ L+ LV+ + L + ++E +LE + +
Sbjct: 1064 RARAWVTDLEEIQNGEHY--P--C----LDDLEGLVAIGRDLPVKMEELKQLELQVASAH 1115
Query: 1187 RWQNHAS 1193
W+ AS
Sbjct: 1116 SWREKAS 1122
Score = 87 (35.7 bits), Expect = 5.4e-18, Sum P(4) = 5.4e-18
Identities = 26/83 (31%), Positives = 35/83 (42%)
Query: 1429 KIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN 1488
K+ + R+L N P S MC D E + ++C C D YH CL P D
Sbjct: 341 KMTMRLRRNL---NNPQFVDSFVCRMCGRGDEDE-KLMLCDGCDDNYHTFCLIPPLTDPP 396
Query: 1489 HAEAYICPYCQYFESESVSQ-FG 1510
+ CP C E + S+ FG
Sbjct: 397 KGN-WRCPKCVAEECKKPSEAFG 418
Score = 83 (34.3 bits), Expect = 7.1e-112, Sum P(4) = 7.1e-112
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 783 IRDCLHKAENW---SSLPGSDSEKVRLDCVNELLGFDPL-PCNEPGHLILQNYAEEARSL 838
+++ L AE W + + D +K L + ++ L P P L LQ AR+
Sbjct: 1009 LQELLTIAERWEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAW 1068
Query: 839 I---QEI-NAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
+ +EI N C + +LE L + LP+ + E ++L +++SA WR+ K
Sbjct: 1069 VTDLEEIQNGEHYPC--LDDLEGLVAIGRDLPVKMEELKQLELQVASAHSWREKASKTFL 1126
Query: 895 NKCPAAIEIDVLYKL--ESEALDLKIDVPETDMLLKMIG 931
K ++VL +S+ ++ V E D + ++G
Sbjct: 1127 KKNSQHSLLEVLCPCVEKSKKMEDNSMVTEADSDVNVLG 1165
Score = 82 (33.9 bits), Expect = 9.0e-112, Sum P(4) = 9.0e-112
Identities = 70/334 (20%), Positives = 136/334 (40%)
Query: 779 WAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYA--EEAR 836
WA +++ L + E + + D E ++ + ++ P NE + + E+
Sbjct: 807 WANRVKEALEQDEG-NKIDIKDLEVLKEEAADK-----KFPNNELLQRLNTVFVDIEKCE 860
Query: 837 SLIQEI-NAALSACSKISELELLYSRASGLPICIV----ESEKLSQRI----SSAKVWRD 887
S E+ + + S+ + EL+ L LP C++ E + + Q+I S A+V D
Sbjct: 861 SCSTELLSNSQSSRMTLKELKTLVDTMQNLP-CVIKQQDEVQLILQKIEEFDSRAQVLVD 919
Query: 888 SVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC-RARCSEALRG 946
S + P + ++ LE E L + P ++L ++ Q R + G
Sbjct: 920 STKSEWKQDSPLPVATEIQALLE-EGASLPVIAPACELLSGLLEQGRWLGEVRRTLGPEG 978
Query: 947 SMSLKTVELLLQELGDFTVNMPELELLKQYHSDA--IFWIARLNDILVNINGRKDQHNVI 1004
S TV L E G N+P+ ++ ++ + IA + I Q + +
Sbjct: 979 SEVTLTVLRNLMESG---CNVPQSVSVETAMAELQELLTIAERWEEKAQICLEDRQKHHL 1035
Query: 1005 DELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT--KMP-LDFIRQVTAEAV 1061
L I+ E + +Q+ ++ ++ L +A L+ P LD + + A
Sbjct: 1036 STLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGR 1095
Query: 1062 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHK 1095
L ++ E+L L +A+A W E+A+ + K
Sbjct: 1096 DLPVKMEELK-QLELQVASAHSWREKASKTFLKK 1128
Score = 75 (31.5 bits), Expect = 2.0e-108, Sum P(4) = 2.0e-108
Identities = 52/227 (22%), Positives = 101/227 (44%)
Query: 1522 DLRMLIELLSDSEFFCRGIEAKDVLQEV-VDVALECKTCLTDIVK-FESCYLD-KDLHVI 1578
DL +L E +D +F E L V VD+ +C++C T+++ +S + K+L +
Sbjct: 827 DLEVLKEEAADKKF--PNNELLQRLNTVFVDIE-KCESCSTELLSNSQSSRMTLKELKTL 883
Query: 1579 SN---KLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYL 1635
+ L +K ++ + Q D + A+ L S+ + P +IQ L
Sbjct: 884 VDTMQNLPCVIKQQDEVQLI-LQKIEEFD-SRAQVLVDSTKSEWKQDSPLPVATEIQALL 941
Query: 1636 KEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGA-LSLDKVFELIAEGENLP 1693
+EG L I+P L+E R W ++ + G+ ++L + L+ G N+P
Sbjct: 942 EEGASLPVIAPACELLSGLLEQGR----WLGEVRRTLGPEGSEVTLTVLRNLMESGCNVP 997
Query: 1694 VYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLL 1740
+ E + +L I + ++EKA I C + + +H+ ++ +
Sbjct: 998 QSVSVETAMAELQELL-TIAER-WEEKAQI-CLEDRQKHHLSTLEAI 1041
Score = 74 (31.1 bits), Expect = 6.2e-111, Sum P(4) = 6.2e-111
Identities = 60/292 (20%), Positives = 121/292 (41%)
Query: 1151 SLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGD 1210
S + L+ LK LV + L +K+Q E++ ++ E + + A L+ + K D
Sbjct: 873 SRMTLKELKTLVDTMQNLPCVIKQQDEVQLILQKIEEFDSRAQVLVDSTKSEW-KQDSPL 931
Query: 1211 GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSL 1270
++ + + +E+ + A C L G + L TL ++ L+V +L
Sbjct: 932 PVATEIQALLEEGASLPVIAPACELLSGL-LEQGRWLGEVRRTLGPEGSEVT-LTVLRNL 989
Query: 1271 EDVESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCK--LSDVEEVL 1328
+ES V + +S + L L +W ++A ++ C R K LS +E ++
Sbjct: 990 --MESGCNVPQSVSVETAMAELQELLTIAERWEEKA-QI----CLEDRQKHHLSTLEAIV 1042
Query: 1329 AGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAA 1385
+ I P ++ L + + + + W + + N C L+ +G
Sbjct: 1043 NEAQLIPVQLPNILS-LQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVA----IGRDL 1097
Query: 1386 AFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
EL+++ +V +W+++ + T + KNS LL+ + V +S
Sbjct: 1098 PVKMEELKQLELQVASAHSWREKASK---TFL-KKNSQHSLLEVLCPCVEKS 1145
Score = 64 (27.6 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 1696 LEKELKSLRARSMLYC-IC-RKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAA 1750
L + L + + C +C R DEK M+ C CD+ YH C+ L P+ + C
Sbjct: 346 LRRNLNNPQFVDSFVCRMCGRGDEDEKLML-CDGCDDNYHTFCLIPPLTDPPKGNWRCPK 404
Query: 1751 CKPQAEESSTPQNVDG 1766
C AEE P G
Sbjct: 405 CV--AEECKKPSEAFG 418
Score = 63 (27.2 bits), Expect = 5.2e-108, Sum P(3) = 5.2e-108
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIE-IDVLYKLESEALDLKIDVPET 923
LP+ + E E L A W+ ++ + P E +D L ++E E + +K + PE
Sbjct: 1332 LPVRLPEGEALQCLTERAINWQGRAKQALDT--PEVQEALDRLQQVEDEMVSIKEEEPEE 1389
Query: 924 DMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
K G A + EA G + L E G+ + E + S
Sbjct: 1390 KK--KWNGDAVIVLSDSEEAEDGVIDLT-------EDGN-SPKKNERNAVNGTQSGCENG 1439
Query: 984 IARLNDILVNINGRKDQHNVIDELNC-ILKEGASLRIQVDDLPL----VEVELKKAHCRE 1038
I R + + G + +++ L +++ S+R Q+++L L +EV L + H
Sbjct: 1440 IGRKSSAH-EVTGVESLLSLVPSLKGPVVELNTSVRAQLEELQLEGDLLEVTLDQTHAIY 1498
Query: 1039 KALKACDTKMPLDFIRQVTAEAVILQIER 1067
+ L+A ++ P D +R T + LQ +R
Sbjct: 1499 RILQA-SSQPPQDTLR--TLIQIELQEQR 1524
Score = 62 (26.9 bits), Expect = 9.7e-120, Sum P(4) = 9.7e-120
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1707 SMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1737
S CIC P + C+ C +W+H CV
Sbjct: 1251 SQTVCICGGP-PRPLLHRCHLCKDWFHGGCV 1280
Score = 57 (25.1 bits), Expect = 3.2e-109, Sum P(5) = 3.2e-109
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 1607 LARNLWRVRVSKLL--EGLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQW 1663
L + W V + L EG ++ T+ ++N ++ G + S + +L EL I +W
Sbjct: 961 LEQGRWLGEVRRTLGPEG-SEVTLTVLRNLMESGCNVPQSVSVETAMAELQELLTIAERW 1019
Query: 1664 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRA 1705
+ A+ + D L + ++ E + +PV L L SL+A
Sbjct: 1020 EEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNIL-SLQA 1060
Score = 53 (23.7 bits), Expect = 6.2e-111, Sum P(4) = 6.2e-111
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 939 RCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNING 996
RC + R L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1310 RCQRSRRPR--LETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQALDTPEVQE 1367
Query: 997 RKDQ-HNVIDELNCILKE 1013
D+ V DE+ I +E
Sbjct: 1368 ALDRLQQVEDEMVSIKEE 1385
Score = 51 (23.0 bits), Expect = 1.4e-118, Sum P(4) = 1.4e-118
Identities = 20/101 (19%), Positives = 41/101 (40%)
Query: 1337 SFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS---WSLMLQLKELGEAAAFDCPELE 1393
SFP ++ + + K W + +F +C + +L L + PE E
Sbjct: 1281 SFPPLLATSDTHLTKPLCWWDWNTRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGE 1340
Query: 1394 KVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 1434
+ ++ NW+ R K+ + T + L LQ+++ +
Sbjct: 1341 ALQCLTERAINWQGRAKQALDTP--EVQEALDRLQQVEDEM 1379
Score = 51 (23.0 bits), Expect = 1.3e-108, Sum P(5) = 1.3e-108
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNIS-PKDHYRQKLMELNRIGSQWADVAKKV 1670
W + LE K + ++ + E L+ + P Q + R W +++
Sbjct: 1019 WEEKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARA---WVTDLEEI 1075
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV +E ELK L
Sbjct: 1076 QNGEHYPCLDDLEGLVAIGRDLPVKME-ELKQL 1107
Score = 47 (21.6 bits), Expect = 3.6e-118, Sum P(4) = 3.6e-118
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
S T+C+C L C CKD +H C+
Sbjct: 1251 SQTVCICGGPPRPLLHR--CHLCKDWFHGGCV 1280
Score = 45 (20.9 bits), Expect = 5.9e-118, Sum P(4) = 5.9e-118
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 1386 AFDCPELEKVLSKVDKVENWKQRCKE 1411
A D PE+++ L ++ +VE+ KE
Sbjct: 1359 ALDTPEVQEALDRLQQVEDEMVSIKE 1384
Score = 43 (20.2 bits), Expect = 3.7e-110, Sum P(5) = 3.7e-110
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL 1196
RLE++ L+ + L + L E L+ + WQ A L
Sbjct: 1318 RLETILALLVALQRLPVRLPEGEALQCLTERAINWQGRAKQAL 1360
Score = 43 (20.2 bits), Expect = 3.2e-109, Sum P(5) = 3.2e-109
Identities = 23/100 (23%), Positives = 42/100 (42%)
Query: 1367 CAQQSWSLMLQLK-ELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLG 1425
C+ S L L+ + L E A L ++ + + ++W R KE + G+K +
Sbjct: 772 CSCPSEKLYLRYRYTLDELLAM----LHRLKVRAESFDSWANRVKEALEQDEGNKIDIKD 827
Query: 1426 LLQKIKQSVHRSLYIYNKPHGSVSMTLCMC--CESDSKEL 1463
L + +K+ + N+ ++ CES S EL
Sbjct: 828 L-EVLKEEAADKKFPNNELLQRLNTVFVDIEKCESCSTEL 866
Score = 42 (19.8 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 824 GHLILQNYAEEARSLI---QEINAALSACSKISELELLYSRASGLPICIVESEKLSQRI 879
G +++Y + R + +E+ ++AC + +L L + + I + E KL + +
Sbjct: 660 GRSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKSL 718
Score = 40 (19.1 bits), Expect = 5.6e-15, Sum P(4) = 5.6e-15
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 1041 LKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAA-DILIHKAQMC 1099
+ AC K+ L+ E I+ E KL +L ++ ER A ++L + C
Sbjct: 685 MAACPEKLDLNLAAATHREMFIIVQEERKL---RKSLLERGIKEAEREAFELLPDDERQC 741
Query: 1100 E 1100
+
Sbjct: 742 D 742
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 64 PPK-SWKPPFAL------DLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVG 116
PPK +W+ P + +F F T+ + LQ+ D TF+ +Y V
Sbjct: 395 PPKGNWRCPKCVAEECKKPSEAFGFEQATRE-YTLQSFGEMAD--TFKADYFNMPVHMVP 451
Query: 117 TKLNKKVFF 125
T+L +K F+
Sbjct: 452 TELVEKEFW 460
Score = 37 (18.1 bits), Expect = 4.0e-117, Sum P(4) = 4.0e-117
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 1822 WHNR--KPFRRAAKKRTVLDSLCPFI 1845
W + K F + + ++L+ LCP +
Sbjct: 1117 WREKASKTFLKKNSQHSLLEVLCPCV 1142
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 933 (333.5 bits), Expect = 1.6e-119, Sum P(5) = 1.6e-119
Identities = 191/446 (42%), Positives = 266/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D R + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-VKDGRRKMLPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVSHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLLTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVMQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C +K L YR+ L +L L V
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 227 (85.0 bits), Expect = 1.6e-119, Sum P(5) = 1.6e-119
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPMAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEMVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 124 (48.7 bits), Expect = 1.6e-119, Sum P(5) = 1.6e-119
Identities = 91/414 (21%), Positives = 176/414 (42%)
Query: 878 RISSAKVWRDSVRKCIS----NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---I 930
R S W V + +S +K IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKGDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAV 789
Query: 931 GQAESCRARCSEALRGSMSLKT--------VELLLQELGDFTVNMPELE-LLKQYHSDAI 981
+AE+C + L + +L ++EL F + L ++ Q
Sbjct: 790 KEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ--- 846
Query: 982 FWIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAH 1035
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 847 --VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQAR 903
Query: 1036 CREKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 1091
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 904 WLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 963
Query: 1092 LIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPAS 1149
L + + + E I+ ++ I LP++ ++ + A+ W E A+ S
Sbjct: 964 LQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVE-------AIQSGS 1016
Query: 1150 CSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD-- 1204
+ LE L+ L ++ + + + L ++E + W+ + L+ + LL
Sbjct: 1017 -NYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1075
Query: 1205 --KDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHE-ISELQNACSTL 1254
+ DIG G + K+++LI E + L D E + E ++A + +
Sbjct: 1076 SPRTDIGIYGSGKNRRKKVKELIEK-EKEKDLDLEPLSDLEEGLEETRDAATVV 1128
Score = 90 (36.7 bits), Expect = 4.1e-21, Sum P(4) = 4.1e-21
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKC 340
Score = 84 (34.6 bits), Expect = 1.6e-119, Sum P(5) = 1.6e-119
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1761
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S P
Sbjct: 1618 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAESEDYICTNCAKKQGPDSPGP 1672
Score = 78 (32.5 bits), Expect = 4.5e-119, Sum P(4) = 4.5e-119
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1158 RIEDVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1192
Score = 77 (32.2 bits), Expect = 1.3e-114, Sum P(5) = 1.3e-114
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 942 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKS---IPAFLPN 991
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 992 VLSLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1051
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1052 RAWRERTGRTFLKKNSSHTLLQVL 1075
Score = 67 (28.6 bits), Expect = 1.5e-113, Sum P(5) = 1.5e-113
Identities = 47/269 (17%), Positives = 121/269 (44%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 824 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 883
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 884 S---LYVELPELARLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 935
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H+V L I+ E S+ + ++
Sbjct: 936 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKSIPAFLPNVL 993
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 994 SLKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1052
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDI 1111
W ER + K ++ DI
Sbjct: 1053 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1081
Score = 67 (28.6 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 1691 NLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI---- 1745
N+ + K S+ + C+ C + +E ++ C CD+ YH C+ + P++
Sbjct: 276 NMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGD 334
Query: 1746 YICAACKPQAEESSTPQNVDG 1766
+ C C AEE + P+ G
Sbjct: 335 WRCPKCV--AEECNKPREAFG 353
Score = 56 (24.8 bits), Expect = 1.4e-112, Sum P(4) = 1.4e-112
Identities = 56/283 (19%), Positives = 115/283 (40%)
Query: 1244 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 1299
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 943 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVLSLKEALQKA 1002
Query: 1300 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 1359
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1003 REWTTK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1058
Query: 1360 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 1417
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1059 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1116
Query: 1418 G-----DKNSLLGLL----QKIKQSVHRSLYIYNKPHGSV-----SMTLCMCCESDSKEL 1463
G D +++ + QK +++H SL N S+ + C+C ++ S +
Sbjct: 1117 GLEETRDAATVVAVFKEREQKELEAMH-SLRAANLAKMSMVDRIEDVKFCICRKTASGFM 1175
Query: 1464 EFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
L C CKD +H C+ P + + ++CP C
Sbjct: 1176 --LQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1216
Score = 56 (24.8 bits), Expect = 2.1e-112, Sum P(5) = 2.1e-112
Identities = 78/385 (20%), Positives = 143/385 (37%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ LS +++ ++ L GL P VE +L + ++ +
Sbjct: 895 LKQELQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 953
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA + +P L + + +A +
Sbjct: 954 ERWEEKAKVCLQAR-PRH-SVASLESIVNEAKSIPAFLPNVLSLKEALQKAREWTTKVEA 1011
Query: 943 ALRGS--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 1000
GS L+ +E L + V + L ++ + A W R + N
Sbjct: 1012 IQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTL 1071
Query: 1001 HNVIDELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTA 1058
V+ I G + R +V +L +E E +K E D + L+ R
Sbjct: 1072 LQVLSPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRDAAT 1126
Query: 1059 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL 1118
+ + ERE+ ++ L AA + D I + C I R + F++ L
Sbjct: 1127 VVAVFK-EREQKELEAMHSLRAANLAKMSMVD-RIEDVKFC----ICRKTASGFMLQCEL 1180
Query: 1119 --DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKIS 1171
D N + + S K S + P R LE++ L+ + L +
Sbjct: 1181 CKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVR 1240
Query: 1172 LKEQTELEKVINNCERWQNHASSLL 1196
L E L+ + WQ+ A L
Sbjct: 1241 LPEGEALQCLTERAMSWQDRARQAL 1265
Score = 55 (24.4 bits), Expect = 1.8e-112, Sum P(4) = 1.8e-112
Identities = 34/162 (20%), Positives = 68/162 (41%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ A + K L D+ +F + D S+KL + + + V + + L
Sbjct: 840 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELARLKQE 898
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 899 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 955
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1704
W + AK + S+ + ++ E +++P +L L SL+
Sbjct: 956 WEEKAKVCLQARPRHSVASLESIVNEAKSIPAFLPNVL-SLK 996
Score = 50 (22.7 bits), Expect = 2.9e-16, Sum P(4) = 2.9e-16
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 239 VDK-EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
VD+ ED IC + SG ML C+ C +H C+ P
Sbjct: 1156 VDRIEDVKFCICRKTASGF----MLQCELCKDWFHNSCVPLP 1193
Score = 47 (21.6 bits), Expect = 1.3e-111, Sum P(4) = 1.3e-111
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1228 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1266
Score = 43 (20.2 bits), Expect = 6.0e-111, Sum P(5) = 6.0e-111
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 727 SLLYGVKVRAQSYDTWVSRVTEALSANFNHKKGDLIELRVMLEDAEDRKYPENDLFRKLR 786
Query: 1347 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 1394
A+++ + + K +QS L ++EL F P + +
Sbjct: 787 DAVKEAETCASVAQLLLSKKQKHRQSPDGGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 846
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 847 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 879
Score = 42 (19.8 bits), Expect = 1.6e-119, Sum P(5) = 1.6e-119
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1229 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1282
Score = 41 (19.5 bits), Expect = 6.0e-111, Sum P(5) = 6.0e-111
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 1653 LMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1697
L E + +W + + S L+++ L A+G +PV L+
Sbjct: 995 LKEALQKAREWTTKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLD 1039
Score = 39 (18.8 bits), Expect = 5.8e-16, Sum P(4) = 5.8e-16
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 38 (18.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1668 KKVVLDSGAL-SLDKVFELIAEGE 1690
++ V+ G L S ++VFEL+ + E
Sbjct: 650 RESVMQMGVLMSEEEVFELVPDDE 673
Score = 37 (18.1 bits), Expect = 1.1e-99, Sum P(5) = 1.1e-99
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 129 ELDLCKLFNAAKRFGGYDKVVKEKKWGEVFR 159
EL ++F A + G VKEK+ EV R
Sbjct: 235 ELKKLRIFGAGPKVVGLAMGVKEKE-DEVSR 264
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 910 (325.4 bits), Expect = 4.4e-119, Sum P(4) = 4.4e-119
Identities = 188/442 (42%), Positives = 261/442 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + LLCD C+ +H++CL PPL VP+G W C +C+ S ++FGF
Sbjct: 325 VCRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWRCPKCILAECKSPPEAFGF 384
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+ YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 385 EQATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIH 444
Query: 361 TSIYGSGFP---RVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMV 417
+ +GSGFP D PE EY WNLN +P L S+L ++ +I+G+ V
Sbjct: 445 SKEFGSGFPVNNSKWDLSPEE------KEYAACGWNLNVMPVLDQSVLCHINADISGMKV 498
Query: 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDA 477
PWLY+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E VM+ P+LFD+
Sbjct: 499 PWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDS 558
Query: 478 QPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAP 537
QPDLL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF
Sbjct: 559 QPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCT 618
Query: 538 ADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERM 595
ADWLP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER
Sbjct: 619 ADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERR 678
Query: 596 WRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHW 655
R+ L KGI ++ R+ E + +++ CI C+ +LSA+AC P + VCL H
Sbjct: 679 LRKTLLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDSLVCLSHI 733
Query: 656 EHLCECKTRKLHLLYRHTLAEL 677
LC+C + +L YR+TL EL
Sbjct: 734 NDLCKCSRNRQYLRYRYTLDEL 755
Score = 218 (81.8 bits), Expect = 4.4e-119, Sum P(4) = 4.4e-119
Identities = 48/127 (37%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E + LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERKILDLYSLNKIVMEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 169 (64.5 bits), Expect = 4.4e-119, Sum P(4) = 4.4e-119
Identities = 87/382 (22%), Positives = 170/382 (44%)
Query: 839 IQEINAALSACSKISE-LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKC 897
+ IN L CS+ + L Y+ LP + +KL R S W + V+ + +
Sbjct: 730 LSHIND-LCKCSRNRQYLRYRYT-LDELPAML---QKLKIRAESFDNWANKVQAALEVED 784
Query: 898 PAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRARCSEALRGS--------M 948
+ L LESEA D + E L K + +AE+C ++ + S +
Sbjct: 785 GRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQI 844
Query: 949 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELN 1008
+L ++LLL+++G M +++ +K + + L ++ ++ ++ L
Sbjct: 845 TLTELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTSL-----PYS-LEILQ 898
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCREK---ALKACDTKMPLDFIRQ--VTAEAVIL 1063
++++G LR++V + +E L++A ++ AL + L +++ V V
Sbjct: 899 SLMEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMGTKVAS 958
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADIL--IHKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
K +L +L A WEE+A L K E IIR +++I V LP++ +
Sbjct: 959 SPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSL 1018
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + +E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1019 KEALTKAQAWIADVNEIQNGDHY---P--C----LDDLEGLVAVGRDLPVELEELRQLEN 1069
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1070 QVLTAHSWKEKASKTFLKKNSC 1091
Score = 139 (54.0 bits), Expect = 6.1e-116, Sum P(4) = 6.1e-116
Identities = 56/234 (23%), Positives = 117/234 (50%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSACSKISE-LELLYSRASGLPICIVESEK 874
LPC H I +++ ++ S E AL++ E L+ L + L + + E+ +
Sbjct: 859 LPCTM--HQIDEVKDVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQ 916
Query: 875 LSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESE-ALDLKIDVPETDMLLKMIG 931
L + + A+ W D V++ + S + + + + L + ++ A ++ + L +++
Sbjct: 917 LEELLEQAQ-WLDQVKQALAPSGQRHSLVIMKKLLVMGTKVASSPSVNKARAE-LQELLT 974
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
AE + L+ S S T+E++++E + V +P ++ LK+ + A WIA +N+
Sbjct: 975 IAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNE 1034
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L +++++L +E ++ AH +EKA K
Sbjct: 1035 IQ---NG--DHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASK 1083
Score = 115 (45.5 bits), Expect = 2.0e-113, Sum P(4) = 2.0e-113
Identities = 70/298 (23%), Positives = 126/298 (42%)
Query: 873 EKLSQRISSAKVWRDSVRKCISN-----KCPAAIEIDVLYKLESEALDLKIDVPETDMLL 927
++L + ++ A+ V ISN + P I + L L + L + + D +
Sbjct: 812 QRLKKCLTEAEACISQVLGLISNSEDRLQTPQ-ITLTELQLLLKQMGTLPCTMHQIDEVK 870
Query: 928 KMIGQAESCRARCSEALRG-SMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIAR 986
++ Q ES + EAL SL+ ++ L+++ V +PE L++ A W+ +
Sbjct: 871 DVLQQVESYQIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ-WLDQ 929
Query: 987 LNDILVNINGRKDQHNVIDELNCI-LKEGASLRIQVDDLPLVEVELKKAHC-REKA---L 1041
+ L +G++ ++ +L + K +S + L E+ L A C EKA L
Sbjct: 930 VKQALAP-SGQRHSLVIMKKLLVMGTKVASSPSVNKARAELQEL-LTIAECWEEKAHFCL 987
Query: 1042 KACDTKMPLDFIRQVTAEAVILQIEREKLFI----DLSGVLAAAMRWEERAADILIHKAQ 1097
KA P T E +I + E +++ L L A W +I
Sbjct: 988 KASQKHSP------ATLEVIIREAENIPVYLPNIQSLKEALTKAQAWIADVNEIQNGDHY 1041
Query: 1098 MC--EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWL-KNSELFLA--SAFAVAPASC 1150
C + E ++ +D+ V L L +++N++ TA SW K S+ FL S + + C
Sbjct: 1042 PCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKNSCYTLLEVLC 1099
Score = 91 (37.1 bits), Expect = 9.5e-20, Sum P(4) = 9.5e-20
Identities = 29/104 (27%), Positives = 46/104 (44%)
Query: 1413 VGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMT---LCMCCESDSKELEFLICS 1469
V ++ DKN L + + ++ + N H S +C C + +FL+C
Sbjct: 288 VTSAFSDKN----LNHSFEPCMKMTMQLRNN-HSSTQFMNSYVCRICSRGDEVDKFLLCD 342
Query: 1470 ACKDCYHLQCLRP--TEVDRNHAEAYICPYCQYFESESVSQ-FG 1510
C D YH+ CL P +EV + + CP C E +S + FG
Sbjct: 343 GCSDNYHIFCLLPPLSEVPKG---VWRCPKCILAECKSPPEAFG 383
Score = 73 (30.8 bits), Expect = 5.1e-109, Sum P(4) = 5.1e-109
Identities = 98/495 (19%), Positives = 195/495 (39%)
Query: 1018 RIQVDDLPLVEVELKK--------AHCREKALKACD-TKMPLDFIRQVTAEAVILQIERE 1068
R +D+LP + +LK A+ + AL+ D K + +R + +EA +
Sbjct: 749 RYTLDELPAMLQKLKIRAESFDNWANKVQAALEVEDGRKRSFEELRALESEARDRRFPNS 808
Query: 1069 KLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDI-IRASQDIFVVLPSLDEVQNEIST 1127
+L L L A + ++ + + I + Q + + +L ++I
Sbjct: 809 ELLQRLKKCLTEAEACISQVLGLISNSEDRLQTPQITLTELQLLLKQMGTLPCTMHQIDE 868
Query: 1128 AKSWLKNSELFLASAFAVAPASCSL-LRLESLKDLVSQSKFLKISLKEQTELEKVINNCE 1186
K L+ E + A SL LE L+ L+ + + L++ + E +LE+++ +
Sbjct: 869 VKDVLQQVESY---QIETREALTSLPYSLEILQSLMEKGQQLRVEVPEAHQLEELLEQAQ 925
Query: 1187 RWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLG-FDFHEIS 1245
W + L + G +SLV + L+ + A++ ++ + E+
Sbjct: 926 -WLDQVKQALAPS-----------GQRHSLVIMKKLLVMGTKVASSPSVNKARAELQELL 973
Query: 1246 ELQNACST-LHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWL 1303
+ H+C KA SP+ +E ++ AE + + L +L W+
Sbjct: 974 TIAECWEEKAHFCLKASQ--KHSPAT--LEVIIREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 1304 KRALEVISA---PCKFKRCKLSDVEEVLAGCKGINFSFPVVIGEL----TSAIQKHKLWQ 1356
E+ + PC L D+E ++A + PV + EL + H W+
Sbjct: 1030 ADVNEIQNGDHYPC------LDDLEGLVA----VGRDLPVELEELRQLENQVLTAHS-WK 1078
Query: 1357 EQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS 1416
E+ + F LK ++L+ L +A + + + K + + +
Sbjct: 1079 EKASKTF-LK-KNSCYTLLEVLCPCADAGSVSTKR-SRWIEKEMGLYKYDTELLGLSAQD 1135
Query: 1417 VGDKNSLLGLL----QKIKQSVHRSLYIYN-KPHG-SVSM-----TLCMCCESDSKELEF 1465
+ D S++ +K K+ + +I + KP S SM ++C+C + + +E
Sbjct: 1136 LRDPGSVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNASATSICICGQVCAG-VES 1194
Query: 1466 LICSACKDCYHLQCL 1480
L C C D +H QC+
Sbjct: 1195 LQCDLCHDWFHGQCV 1209
Score = 71 (30.1 bits), Expect = 8.3e-109, Sum P(4) = 8.3e-109
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 1521 SDLRMLIELLSDSEFFCRGI-EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1579
++L++L++ + I E KDVLQ+V +E + LT L L ++
Sbjct: 847 TELQLLLKQMGTLPCTMHQIDEVKDVLQQVESYQIETREALTS--------LPYSLEILQ 898
Query: 1580 NKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGL-TKPTIGQIQNYLKEG 1638
+ + K ++ V +++ L+ L + W +V + L + ++ ++ L G
Sbjct: 899 SLME---KGQQLR-VEVPEAHQ-LEELLEQAQWLDQVKQALAPSGQRHSLVIMKKLLVMG 953
Query: 1639 LLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLE 1697
+ SP + R +L EL I W + A + S S + +I E EN+PVYL
Sbjct: 954 TKVASSPSVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLP 1013
Query: 1698 KELKSLR 1704
++SL+
Sbjct: 1014 N-IQSLK 1019
Score = 63 (27.2 bits), Expect = 5.7e-108, Sum P(4) = 5.7e-108
Identities = 38/188 (20%), Positives = 78/188 (41%)
Query: 722 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRW 779
+ +L+EQ WL +V Q L S +L+ ++ L G ++ A VNK +
Sbjct: 917 LEELLEQAQWLD---QVKQALAPSGQRHSLVI-MKKLLVMGTKV-ASSPSVNKARAELQE 971
Query: 780 AEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLI 839
I +C + ++ L+ + + + +P P L+ +A++ I
Sbjct: 972 LLTIAECWEEKAHFCLKASQKHSPATLEVI--IREAENIPVYLPNIQSLKEALTKAQAWI 1029
Query: 840 QEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCI--SN 895
++N + + +LE L + LP+ + E +L ++ +A W++ K N
Sbjct: 1030 ADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEKASKTFLKKN 1089
Query: 896 KCPAAIEI 903
C +E+
Sbjct: 1090 SCYTLLEV 1097
Score = 61 (26.5 bits), Expect = 4.4e-119, Sum P(4) = 4.4e-119
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1702 SLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV 1737
S+ A + CIC + + C C +W+H CV
Sbjct: 1174 SMNASATSICICGQVCAGVESLQCDLCHDWFHGQCV 1209
Score = 56 (24.8 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 1692 LPVYLEKELKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYI 1747
+ + L S + + C IC + + + C C + YHI C+ L P+ ++
Sbjct: 307 MTMQLRNNHSSTQFMNSYVCRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWR 366
Query: 1748 CAACKPQAEESSTPQ 1762
C C AE S P+
Sbjct: 367 CPKCI-LAECKSPPE 380
Score = 50 (22.7 bits), Expect = 1.3e-106, Sum P(4) = 1.3e-106
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 1651 QKLMELNRIGSQW-ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1703
Q L E W ADV ++ LD + L+A G +LPV LE EL+ L
Sbjct: 1016 QSLKEALTKAQAWIADV-NEIQNGDHYPCLDDLEGLVAVGRDLPVELE-ELRQL 1067
Score = 50 (22.7 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
IC Q +G+ L CD C+ +H C++ P
Sbjct: 1184 ICGQVCAGVES---LQCDLCHDWFHGQCVTVP 1212
Score = 49 (22.3 bits), Expect = 1.4e-106, Sum P(5) = 1.4e-106
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L +V +PE E L+ AI W R L +
Sbjct: 1250 LETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALAS 1293
Score = 46 (21.3 bits), Expect = 2.3e-114, Sum P(4) = 2.3e-114
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 1203
RLE++ L+ + L + L E L+ + WQ A L +D LL
Sbjct: 1249 RLETILSLLVGLQRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALL 1300
Score = 41 (19.5 bits), Expect = 7.7e-114, Sum P(4) = 7.7e-114
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 1107 ASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSK 1166
AS+D+ +L L++ + ++ K L S FA C L S KD++ + +
Sbjct: 1292 ASEDVTALLKQLEKSRQQLQDELRHKKPPTL--PSGFAF---DC--LTENSGKDILKEEE 1344
Query: 1167 FLKISLKEQTELEKVI---NNCERWQNHASSLL 1196
L ++ + EK++ ++C+ + SLL
Sbjct: 1345 ELVLNEERIKSSEKIVPKESSCKGDKELLPSLL 1377
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 920 (328.9 bits), Expect = 8.2e-119, Sum P(5) = 8.2e-119
Identities = 183/439 (41%), Positives = 266/439 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
IC+ C G + +L CD C+ +H++CL PPL +PRG W C +C+ ++ ++FGF
Sbjct: 316 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGF 375
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+ Y+++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 376 EQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIH 435
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + +++ EY S WNLN +P L S+L ++ +I+G+ VPWL
Sbjct: 436 SKEFGSGFP--VSNSKQNLSPEE-KEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWL 492
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 493 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPD 552
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 553 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 612
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 613 LPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRK 672
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KG+ ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 673 ALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 727
Query: 659 CECKTRKLHLLYRHTLAEL 677
C+C + + +L YR+TL EL
Sbjct: 728 CKCSSSRQYLRYRYTLDEL 746
Score = 217 (81.4 bits), Expect = 8.2e-119, Sum P(5) = 8.2e-119
Identities = 48/127 (37%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E + LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERKILDLYSLSKIVIEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 149 (57.5 bits), Expect = 8.2e-119, Sum P(5) = 8.2e-119
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 947
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 948 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 1007
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 835 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 888
Query: 1008 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 1062
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 889 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 948
Query: 1063 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 1120
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 949 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 1008
Query: 1121 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 1179
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1009 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1059
Query: 1180 KVINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1060 LQVLTAHSWREKASKTFLKKNSC 1082
Score = 147 (56.8 bits), Expect = 1.3e-118, Sum P(5) = 1.3e-118
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 850 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 907
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 908 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 966
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 967 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 1025
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1026 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Score = 84 (34.6 bits), Expect = 3.8e-18, Sum P(4) = 3.8e-18
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 1443 KPHGS---VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPY 1497
K H S + +C C ++ + L C C D YH+ CL P E+ R + CP
Sbjct: 304 KNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG---IWRCPK 360
Query: 1498 CQYFESESVSQ-FG 1510
C E + + FG
Sbjct: 361 CILAECKQPPEAFG 374
Score = 71 (30.1 bits), Expect = 1.2e-110, Sum P(5) = 1.2e-110
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 722 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 774
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 908 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 964
Query: 775 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 833
RW E CL + P + E + + N +P + P L+
Sbjct: 965 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 1014
Query: 834 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 891
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 1015 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1074
Query: 892 CI--SNKCPAAIEI 903
N C +E+
Sbjct: 1075 TFLKKNSCYTLLEV 1088
Score = 63 (27.2 bits), Expect = 2.6e-118, Sum P(4) = 2.6e-118
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1702 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1744
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1165 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1211
Score = 63 (27.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1696 LEKELKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
L K S + C +C + ++ ++ C CD+ YHI C+ L PEI
Sbjct: 302 LRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCL-LPPLPEI 351
Score = 61 (26.5 bits), Expect = 9.1e-111, Sum P(5) = 9.1e-111
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1631 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1688
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 937 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 995
Query: 1689 GENLPVYL 1696
EN+PV+L
Sbjct: 996 TENIPVHL 1003
Score = 58 (25.5 bits), Expect = 8.2e-119, Sum P(5) = 8.2e-119
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1134 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1192
Query: 1472 KDCYHLQCL 1480
+D +H QC+
Sbjct: 1193 QDWFHGQCV 1201
Score = 58 (25.5 bits), Expect = 9.1e-111, Sum P(5) = 9.1e-111
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 1342 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 1401
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 857 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 914
Query: 1402 VENWKQRCKEIVGTSVGDKNSLL---GLL 1427
+ W K+ + S + SL+ GLL
Sbjct: 915 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 941
Score = 53 (23.7 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
+C Q +G+ G +L CD C +H C+S P
Sbjct: 1176 VCGQVPAGV-G--VLQCDLCQDWFHGQCVSVP 1204
Score = 52 (23.4 bits), Expect = 8.2e-119, Sum P(5) = 8.2e-119
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1619 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1676
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1387 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1438
Query: 1677 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1721
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1439 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1487
Score = 51 (23.0 bits), Expect = 1.4e-108, Sum P(5) = 1.4e-108
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 1279
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 888 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 947
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 948 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 1004
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1005 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1059
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1060 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1087
Score = 48 (22.0 bits), Expect = 1.3e-109, Sum P(5) = 1.3e-109
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 1009
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1242 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1290
Query: 1010 ILKEGASLRIQVDDLPLVE 1028
+L++ A LR Q+ P E
Sbjct: 1291 LLRQLAELRQQLQAKPRPE 1309
Score = 48 (22.0 bits), Expect = 2.1e-109, Sum P(5) = 2.1e-109
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1035 LDDLEGLVAVGRDLPVGLE-ELRQL 1058
Score = 48 (22.0 bits), Expect = 1.1e-106, Sum P(5) = 1.1e-106
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1255 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1291
Score = 45 (20.9 bits), Expect = 3.0e-117, Sum P(5) = 3.0e-117
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 1203
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1241 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1292
Score = 43 (20.2 bits), Expect = 1.1e-106, Sum P(5) = 1.1e-106
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 808 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 864
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1115 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1171
Query: 865 LPICI 869
IC+
Sbjct: 1172 TSICV 1176
Score = 37 (18.1 bits), Expect = 3.9e-22, Sum P(5) = 3.9e-22
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 306 GKRYTVESFRRVADRAKKKRF 326
G++ + E R + A+++RF
Sbjct: 776 GRKRSFEELRALESEARERRF 796
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 943 (337.0 bits), Expect = 4.3e-118, Sum P(5) = 4.3e-118
Identities = 187/442 (42%), Positives = 268/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL N +++FGF
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQECNKPQEAFGF 370
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 371 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 430
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 431 SKEFGSGFP-VRDGKIKISPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 487
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 488 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPD 547
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 548 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 607
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 608 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 667
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ CI C+ ++SA++C C+P VCL H + L
Sbjct: 668 TVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKEL 722
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K +L YR+TL +LY +
Sbjct: 723 CSCPPYKYNLRYRYTLDDLYPM 744
Score = 196 (74.1 bits), Expect = 4.3e-118, Sum P(5) = 4.3e-118
Identities = 45/127 (35%), Positives = 72/127 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 33 PVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNE 92
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + +++ E G+ L K E + LDL +L GG+ V K
Sbjct: 93 LEAQTRV--KLNFLDQIAKYW-ELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCK 148
Query: 151 EKKWGEV 157
++KW ++
Sbjct: 149 DRKWTKI 155
Score = 129 (50.5 bits), Expect = 4.3e-118, Sum P(5) = 4.3e-118
Identities = 70/337 (20%), Positives = 143/337 (42%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 748 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 805
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
AE C + + L G + + TVN + + Y + L D+
Sbjct: 806 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 865
Query: 991 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 1042
L + + Q + +E+ L+E + + D +LP L E + L++A E+ +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQ 925
Query: 1043 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 1097
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 926 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 985
Query: 1098 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 986 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQDVDALQAGGRV--PV------LE 1037
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 1193
+L +LV++ + + + L LE ++ W+ A+
Sbjct: 1038 TLIELVARGRSIPVHLNSLPRLEMLVAEVHAWKECAA 1074
Score = 93 (37.8 bits), Expect = 1.7e-114, Sum P(4) = 1.7e-114
Identities = 68/370 (18%), Positives = 152/370 (41%)
Query: 1155 LESLKDLVSQS-KFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 1213
L ++D QS K L + EL+++++ + L + R L++ + +
Sbjct: 866 LNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEFDVELPQLTE-MRIRLEQARWLEEVQ 924
Query: 1214 NSLVSKIEQLITSMESAANCGLSLG-FDFHE--ISELQNACSTL-HWCKKALSFLSVSP- 1268
+ + + M + G+ L + E ++ LQ + HW KA S L P
Sbjct: 925 QACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPR 984
Query: 1269 -SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEE 1326
SL + + + E + + ++L +S+ W++ ++ + A + L + E
Sbjct: 985 HSLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDWVQD-VDALQAGGRVP--VLETLIE 1041
Query: 1327 VLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQFFNLKCAQQSWSLMLQ 1377
++A + I S P +++ E+ + K L + + + C + L L
Sbjct: 1042 LVARGRSIPVHLNSLPRLEMLVAEVHAWKECAAKTFLPENSTYSLLEVLCPRCDIGL-LG 1100
Query: 1378 LKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
LK P +K +K++ + + ++ E T+ + LG + + +S
Sbjct: 1101 LKRKQRKLKEPLPSGKKRSTKLESLSDLERALMESKETAAA--MATLGEARLREMEALQS 1158
Query: 1438 LYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEA 1492
L N+ P + M +C+C ++ + + + C C+D +H C+ + ++ +
Sbjct: 1159 LRFANEEKLLSPVQDLEMKVCLCQKTPATPM--IQCELCRDAFHTSCVAAPSISQS-SRI 1215
Query: 1493 YICPYCQYFE 1502
++CP+C+ E
Sbjct: 1216 WLCPHCRRSE 1225
Score = 91 (37.1 bits), Expect = 3.0e-17, Sum P(5) = 3.0e-17
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
+V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 306 AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGD-WRCPKC 356
Score = 80 (33.2 bits), Expect = 7.7e-117, Sum P(5) = 7.7e-117
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 1214
LE + L++ + +++ L E L +I WQ+ A LL L +D +G GL +
Sbjct: 1229 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQDQVGSGLLS 1288
Query: 1215 S 1215
S
Sbjct: 1289 S 1289
Score = 78 (32.5 bits), Expect = 4.3e-118, Sum P(5) = 4.3e-118
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1672 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1725
+DS L ++ ++L+ AE +LP Y E+E C +P DE + C
Sbjct: 1446 MDSFKLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1505
Query: 1726 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C++W+H CV + ++ E YIC C
Sbjct: 1506 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 77 (32.2 bits), Expect = 7.7e-117, Sum P(5) = 7.7e-117
Identities = 34/165 (20%), Positives = 70/165 (42%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P +L++ + AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 998 EEIPAYLPNGTVLKDSVQRARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1056
Query: 873 EKLSQRISSAKVWRDSVRKCI--SNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMI 930
+L ++ W++ K N + +E+ + + + L LK + L
Sbjct: 1057 PRLEMLVAEVHAWKECAAKTFLPENSTYSLLEV-LCPRCDIGLLGLKRKQRKLKEPLPS- 1114
Query: 931 GQAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 974
G+ S + S+ R M K + LG+ + E+E L+
Sbjct: 1115 GKKRSTKLESLSDLERALMESKETAAAMATLGE--ARLREMEALQ 1157
Score = 76 (31.8 bits), Expect = 4.7e-118, Sum P(4) = 4.7e-118
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1697 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAPEIYICAACK 1752
EK L ++ M C+C+K MI C C + +H CV + + I++C C+
Sbjct: 1165 EKLLSPVQDLEMKVCLCQKT-PATPMIQCELCRDAFHTSCVAAPSISQSSRIWLCPHCR 1222
Score = 73 (30.8 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K+ A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 302 KTATAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCL--AQ 359
Query: 1757 ESSTPQNVDG 1766
E + PQ G
Sbjct: 360 ECNKPQEAFG 369
Score = 71 (30.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 240 DKEDELDQICE--QCKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
D EDE D IC C EV + CD CN+ +H C+ + + ++ C+ C
Sbjct: 1479 DSEDE-DAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTG 1537
Query: 296 SDKDS 300
D S
Sbjct: 1538 KDAPS 1542
Score = 68 (29.0 bits), Expect = 6.8e-116, Sum P(5) = 6.8e-116
Identities = 26/114 (22%), Positives = 59/114 (51%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 839 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQQSQKLLSEEMPSAAELQELLDVSF 898
Query: 912 EALDLKIDVPE-TDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 961
E D +++P+ T+M +++ QA E + C ++ S+SL + L+ +LG
Sbjct: 899 E-FD--VELPQLTEMRIRL-EQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 945
Score = 68 (29.0 bits), Expect = 1.1e-107, Sum P(4) = 1.1e-107
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 917 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 974
Query: 1721 A 1721
A
Sbjct: 975 A 975
Score = 65 (27.9 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDK 298
M+ C+ C +H C++ P W C C S+K
Sbjct: 1189 MIQCELCRDAFHTSCVAAPSISQSSRIWLCPHCRRSEK 1226
Score = 61 (26.5 bits), Expect = 1.1e-113, Sum P(5) = 1.1e-113
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 960 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1004
Score = 55 (24.4 bits), Expect = 1.1e-115, Sum P(5) = 1.1e-115
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1492 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1535
Score = 50 (22.7 bits), Expect = 1.4e-110, Sum P(5) = 1.4e-110
Identities = 41/189 (21%), Positives = 72/189 (38%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+PLP + L++ ++ R+L++ A +A + + E L A + EKL
Sbjct: 1110 EPLPSGKKRSTKLESLSDLERALMESKETA-AAMATLGEARLREMEALQ-SLRFANEEKL 1167
Query: 876 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 934
+ ++ + C+ K PA I +L +A + P + I
Sbjct: 1168 LSPVQDLEM-----KVCLCQKTPATPMIQC--ELCRDAFHTSCVAAPSISQSSR-IWLCP 1219
Query: 935 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 994
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1220 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSG 1273
Query: 995 NGRKDQHNV 1003
N + Q V
Sbjct: 1274 NLKLVQDQV 1282
Score = 48 (22.0 bits), Expect = 2.4e-112, Sum P(5) = 2.4e-112
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1679 LDKVFELIAEGENLPVYL 1696
L+ + EL+A G ++PV+L
Sbjct: 1036 LETLIELVARGRSIPVHL 1053
Score = 47 (21.6 bits), Expect = 2.2e-113, Sum P(5) = 2.2e-113
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 1182
S W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1314 SLPDDW-DNRTSYLHSPFSTGQSCLPLHGLSPEVNELLMEAQLLQVSLPEIQELYQTL 1370
Score = 45 (20.9 bits), Expect = 1.7e-113, Sum P(5) = 1.7e-113
Identities = 31/144 (21%), Positives = 56/144 (38%)
Query: 752 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 807
E ++ L FE D + ++ +E RW E ++ CL SSL D ++
Sbjct: 889 ELQELLDVSFEFDVELPQLTEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 941
Query: 808 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
++ +G P E LQ + + + L A + S S L
Sbjct: 942 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 992
Query: 868 CIVESEKLSQRISSAKVWRDSVRK 891
+ E E++ + + V +DSV++
Sbjct: 993 AVKEMEEIPAYLPNGTVLKDSVQR 1016
Score = 40 (19.1 bits), Expect = 4.3e-118, Sum P(5) = 4.3e-118
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGT 1415
PE + + +++ NW+ R ++++ +
Sbjct: 1247 PEGDALRYMIERTVNWQHRAQQLLSS 1272
Score = 39 (18.8 bits), Expect = 3.0e-17, Sum P(5) = 3.0e-17
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 172 RGHYERILNPYNLFLS-GDSLRCLQKPNLTSDTKDKEYKPHDIPQRQSVQPAETCPPARR 230
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 231 AKRMRAEAMNIKIEPEE 247
Score = 38 (18.4 bits), Expect = 1.4e-110, Sum P(5) = 1.4e-110
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 743 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 786
Score = 38 (18.4 bits), Expect = 1.4e-110, Sum P(5) = 1.4e-110
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 737 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 795
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 796 LLRHL-RLVT--QDAEKC 810
Score = 37 (18.1 bits), Expect = 2.4e-112, Sum P(5) = 2.4e-112
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSE 1136
E +++ +Q + V LP + E+ + T S ++ ++
Sbjct: 1345 EVNELLMEAQLLQVSLPEIQELYQTLLTKPSSVQQAD 1381
Score = 37 (18.1 bits), Expect = 2.4e-112, Sum P(5) = 2.4e-112
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1235 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1272
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 934 (333.8 bits), Expect = 6.1e-118, Sum P(4) = 6.1e-118
Identities = 185/442 (41%), Positives = 267/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 310 VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 369
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 370 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 429
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 430 SKEFGSGFP-VRDGKVKLSPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 486
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 487 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLEAVMKRLAPELFVSQPD 546
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 547 LLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 606
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 607 LPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQKDMAIMIEDEKALRE 666
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ C+ C+ ++SA++C C+P VCL H + L
Sbjct: 667 TVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKEL 721
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K L YR+TL +LY +
Sbjct: 722 CSCPPYKYKLRYRYTLDDLYPM 743
Score = 185 (70.2 bits), Expect = 6.1e-118, Sum P(4) = 6.1e-118
Identities = 45/127 (35%), Positives = 71/127 (55%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF DP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 33 PVFEPSW-EFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNE 91
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + +++ E G+ L K E + LDL +L GG+ V K
Sbjct: 92 LEAQTRV--KLNFLDQIAKYW-ELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCK 147
Query: 151 EKKWGEV 157
++KW ++
Sbjct: 148 DRKWTKI 154
Score = 114 (45.2 bits), Expect = 6.1e-118, Sum P(4) = 6.1e-118
Identities = 40/195 (20%), Positives = 88/195 (45%)
Query: 1006 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVIL 1063
EL +L +++ L + L++AH E+ +AC + + LD +R++ V L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGL 947
Query: 1064 QIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLD 1119
EK L +L + W+++A +L + + + +++ ++I LPS
Sbjct: 948 APYSAVEKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGA 1007
Query: 1120 EVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 1179
+++ + A+ WL++ E P L++L +LV++ + + + L LE
Sbjct: 1008 ALKDSVQRARDWLQDVEALQVGGRV--PV------LDTLIELVTRGRSIPVHLSSLPRLE 1059
Query: 1180 KVINNCERWQNHASS 1194
++ W+ A++
Sbjct: 1060 SLVAEVHVWKECAAN 1074
Score = 98 (39.6 bits), Expect = 2.7e-17, Sum P(6) = 2.7e-17
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 301 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 359
Query: 1503 -SESVSQFG 1510
S+ FG
Sbjct: 360 CSKPQEAFG 368
Score = 87 (35.7 bits), Expect = 1.6e-115, Sum P(4) = 1.6e-115
Identities = 54/267 (20%), Positives = 107/267 (40%)
Query: 1255 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 1311
HW KA S L P SL + +++ E + S + L +S+ WL+ +E +
Sbjct: 969 HWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSVQRARDWLQD-VEALQ 1027
Query: 1312 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 1371
+ L + E++ + I + L S + + +W+E F + S
Sbjct: 1028 VGGRVP--VLDTLIELVTRGRSIPVHLSS-LPRLESLVAEVHVWKECAANTFLTE--NSS 1082
Query: 1372 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDK 1420
+SL+ L LK P K +V+ + + ++ E T+
Sbjct: 1083 FSLLEVLCPRCDVGLLGLKRKQRKLKEPLPSGRKKSPRVESLSDLERALMESRETA--SA 1140
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCY 1475
+ LG + + +SL + N+ P V M +C+C ++ + + + C C+D +
Sbjct: 1141 MATLGEARLREMEALQSLRLANEGKLLSPVQDVDMKVCLCQKAPAAPM--IQCELCRDAF 1198
Query: 1476 HLQCLRPTEVDRNHAEAYICPYCQYFE 1502
H C+ + + ++CP+C+ E
Sbjct: 1199 HTSCVAVPSISQG-PRIWLCPHCRRSE 1224
Score = 82 (33.9 bits), Expect = 1.6e-115, Sum P(4) = 1.6e-115
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +D++ S + V LP L E++ + A WL+ E+ A + P+S SL + L
Sbjct: 888 ELQDLLDVSFEFDVELPQLAEMRTRLEQAH-WLE--EVQQA---CLDPSSLSLDDMRRLI 941
Query: 1160 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
DL V + + + K L++++ E W + A SLL+
Sbjct: 942 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKARSLLK 979
Score = 79 (32.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 37/150 (24%), Positives = 60/150 (40%)
Query: 1624 TKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNR-IGSQWADVAKKVVLDSGAL--SLD 1680
T P + + E + + I P++ + L R +G + L S +L+
Sbjct: 223 TCPPARRAKRMRAEAMNIKIEPEETAEARTHNLRRRMGCPAPKCENEKDLKSSIKQEALE 282
Query: 1681 KVFELIAEGENLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV-- 1737
K +I + P K K+ A + C+ C DE ++ C CD+ YH C+
Sbjct: 283 KKEYVIESEKEKPKSRAK--KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIP 340
Query: 1738 KLLSAPE-IYICAACKPQAEESSTPQNVDG 1766
L P+ + C C A+E S PQ G
Sbjct: 341 PLHDVPKGDWRCPKCL--AQECSKPQEAFG 368
Score = 78 (32.5 bits), Expect = 6.1e-118, Sum P(4) = 6.1e-118
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1698 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS---APEIYICAACK 1752
K L ++ M C+C+K MI C C + +H CV + S P I++C C+
Sbjct: 1165 KLLSPVQDVDMKVCLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGPRIWLCPHCR 1221
Score = 78 (32.5 bits), Expect = 3.7e-114, Sum P(4) = 3.7e-114
Identities = 52/239 (21%), Positives = 100/239 (41%)
Query: 809 VNELLGFDP----LPCNEPGHLILQNYAEEARSLIQEINAALSA-CSKISELELLYSRAS 863
VNEL F LPC +L++ Q LS +EL+ L +
Sbjct: 838 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 897
Query: 864 GLPICIVESEKLSQRISSAKVWRDSVRK-CISNKCPAAIEIDVLYKLESEALDLK-IDVP 921
+ + + ++ R+ A W + V++ C+ P+++ +D + +L + L
Sbjct: 898 EFDVELPQLAEMRTRLEQAH-WLEEVQQACLD---PSSLSLDDMRRLIDLGVGLAPYSAV 953
Query: 922 ETDM--LLKMIGQAESC--RARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYH 977
E M L +++ +E +AR R SL ++ +++E+ + +P LK
Sbjct: 954 EKAMARLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSV 1013
Query: 978 SDAIFWIARLNDI-LVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAH 1035
A W L D+ + + GR V+D L ++ G S+ + + LP +E + + H
Sbjct: 1014 QRARDW---LQDVEALQVGGRVP---VLDTLIELVTRGRSIPVHLSSLPRLESLVAEVH 1066
Score = 70 (29.7 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 261 MLLCDRCNKGWHVYCLS-PPLKHVPRGNWYCLECLNSDK 298
M+ C+ C +H C++ P + PR W C C S+K
Sbjct: 1188 MIQCELCRDAFHTSCVAVPSISQGPR-IWLCPHCRRSEK 1225
Score = 67 (28.6 bits), Expect = 5.2e-113, Sum P(4) = 5.2e-113
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1228 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSGNLKPVQDRVGSGL 1285
Score = 64 (27.6 bits), Expect = 1.1e-112, Sum P(4) = 1.1e-112
Identities = 32/164 (19%), Positives = 68/164 (41%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 997 EEIPAYLPSGAALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLSSL 1055
Query: 873 EKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIG 931
+L ++ VW++ + + ++VL + + L LK + L G
Sbjct: 1056 PRLESLVAEVHVWKECAANTFLTENSSFSLLEVLCPRCDVGLLGLKRKQRKLKEPLPS-G 1114
Query: 932 QAESCRARC-SEALRGSMSLKTVELLLQELGDFTVNMPELELLK 974
+ +S R S+ R M + + LG+ + E+E L+
Sbjct: 1115 RKKSPRVESLSDLERALMESRETASAMATLGE--ARLREMEALQ 1156
Score = 62 (26.9 bits), Expect = 1.7e-112, Sum P(4) = 1.7e-112
Identities = 52/241 (21%), Positives = 101/241 (41%)
Query: 1195 LLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFH--EISELQNACS 1252
LL+D LL++ + S L+S E++ ++ E +S FD +++E++
Sbjct: 860 LLKD---LLNRVEDFQQHSQKLLS--EEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLE 914
Query: 1253 TLHWCKKAL-SFLSVSP-SLEDVESLMAVAEGLS--TRCFSSM--LWNSLIHGVKWLKRA 1306
HW ++ + L S SL+D+ L+ + GL+ + +M L L W +A
Sbjct: 915 QAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKA 974
Query: 1307 LEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK 1366
++ A R L+ + V+ + I P L ++Q+ + W + V + +
Sbjct: 975 RSLLKAR---PRHSLNSLATVVKEMEEIPAYLPSGAA-LKDSVQRARDWLQDV-EALQVG 1029
Query: 1367 CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGL 1426
+++L G + L ++ S V +V WK+ C + SLL +
Sbjct: 1030 GRVPVLDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKE-CAANTFLTENSSFSLLEV 1088
Query: 1427 L 1427
L
Sbjct: 1089 L 1089
Score = 62 (26.9 bits), Expect = 3.5e-110, Sum P(4) = 3.5e-110
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
+ W + ++ LD +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 916 AHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 973
Query: 1721 A 1721
A
Sbjct: 974 A 974
Score = 61 (26.5 bits), Expect = 9.8e-115, Sum P(5) = 9.8e-115
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
+L EL + W D A+ ++ SL+ + ++ E E +P YL
Sbjct: 959 RLQELLTVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYL 1003
Score = 56 (24.8 bits), Expect = 9.8e-115, Sum P(5) = 9.8e-115
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD----ARCLLDKDDI 1208
L + L+ V+Q L L + L+ ++N E +Q H+ LL + A L D D+
Sbjct: 836 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDV 895
Query: 1209 GDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 1251
L ++ ++ T +E A H + E+Q AC
Sbjct: 896 SFEFDVEL-PQLAEMRTRLEQA-----------HWLEEVQQAC 926
Score = 53 (23.7 bits), Expect = 5.8e-112, Sum P(4) = 5.8e-112
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 1679 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1713
LD + EL+ G ++PV+L L+SL A ++ C
Sbjct: 1035 LDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKEC 1071
Score = 53 (23.7 bits), Expect = 3.7e-107, Sum P(3) = 3.7e-107
Identities = 44/195 (22%), Positives = 74/195 (37%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+PLP +++ ++ R+L++ A SA + + E L A + + KL
Sbjct: 1109 EPLPSGRKKSPRVESLSDLERALMESRETA-SAMATLGEARLREMEALQ-SLRLANEGKL 1166
Query: 876 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 934
+ ++ C+ K PAA I +L +A + VP + I
Sbjct: 1167 LSPVQDV-----DMKVCLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGPR-IWLCP 1218
Query: 935 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 994
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1219 HCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRARQLLSSG 1272
Query: 995 NGRKDQHNVIDELNC 1009
N + Q V L C
Sbjct: 1273 NLKPVQDRVGSGLLC 1287
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(6) = 2.7e-17
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 886 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET-DMLLKMIGQAESCRA-RCSEA 943
R SV+ S CP A ++ +EA+++KI+ ET + + + C A +C
Sbjct: 215 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEETAEARTHNLRRRMGCPAPKCENE 269
Query: 944 --LRGSMSLKTVE 954
L+ S+ + +E
Sbjct: 270 KDLKSSIKQEALE 282
Score = 41 (19.5 bits), Expect = 4.7e-114, Sum P(4) = 4.7e-114
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGT 1415
PE + + +++ NW+ R ++++ +
Sbjct: 1246 PEGDALRYMIERTVNWQHRARQLLSS 1271
Score = 38 (18.4 bits), Expect = 7.5e-113, Sum P(5) = 7.5e-113
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 742 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 785
Score = 38 (18.4 bits), Expect = 7.5e-113, Sum P(5) = 7.5e-113
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 736 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 794
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 795 LLRHL-RLVT--QDAEKC 809
Score = 38 (18.4 bits), Expect = 1.0e-16, Sum P(6) = 1.0e-16
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 171 RGHYERILNPYNLFLS-GDSLRCLQKPNLNTDTKDKEYKPHDIPQRQSVQPSETCPPARR 229
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 230 AKRMRAEAMNIKIEPEE 246
Score = 37 (18.1 bits), Expect = 2.7e-17, Sum P(6) = 2.7e-17
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 1529 LLSDSEFFCRGIEAKDVLQEVV 1550
+ S E CR DVL VV
Sbjct: 625 VFSHDEMICRMASKADVLDVVV 646
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 915 (327.2 bits), Expect = 6.3e-118, Sum P(5) = 6.3e-118
Identities = 187/446 (41%), Positives = 264/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 298 VCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGF 357
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 358 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 417
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D R + + +Y S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 418 SKDFGSGFP-VKDGRRKLMPEE--EDYALSGWNLNNMPILEQSVLAHINADISGMKVPWL 474
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E VM+ P+LF++QPD
Sbjct: 475 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMKELAPELFESQPD 534
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+VL+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 535 LLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 594
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G Y++ + V SHEEL+ +A LD ++ + +E+ + +E RE
Sbjct: 595 LPIGRQCVSHYRRLGRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLMIEEETRLRE 654
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 655 TVVQMGVL----MSEEEVFELV-PDDERQCTACRTTCFLSALTCSCNPERLVCLYHPSDL 709
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C + L YR+ L +L L V
Sbjct: 710 CPCPMQNKCLRYRYPLEDLPSLLYGV 735
Score = 224 (83.9 bits), Expect = 6.3e-118, Sum P(5) = 6.3e-118
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 24 PVFEPSWEEFSDPLGFIGRIRGLAEKTGICKIRPPKDWQPPFACEVQSFRFTPRIQRLNE 83
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 84 LEAMTRV--KLDFLDQLAKFW-ELQGSNLKIPVV-ERKILDLYGLSKIVAGKGGFEVVTK 139
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 140 EKKWSKV 146
Score = 135 (52.6 bits), Expect = 6.3e-118, Sum P(5) = 6.3e-118
Identities = 78/340 (22%), Positives = 144/340 (42%)
Query: 717 GVRVTMSQLVEQWLSCSLKVLQGLFS--SDAYG--TLLREAEQFLWAGFEMDAVRDMVNK 772
GV+V +Q + W+S + L + D +L +AE + E D R + +
Sbjct: 734 GVKVR-AQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYP--ENDLFRKLRDA 790
Query: 773 LIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC-VNELLGFD----PLPCNEPGHLI 827
+ E A + L K + S DS + R + EL F LPC
Sbjct: 791 VKEAETCASVAQLLLSKKQKHSR-QSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 828 LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWR 886
++N ++ + A+ S+L+ L SGL + + E +L Q + A+ W
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQELQQAR-WL 908
Query: 887 DSVRKCISNKCPAAIEIDVLYKLESEALDLK----ID--VPETDMLLKMIGQAESCRARC 940
D VR + + P + +DV+ KL + L ++ + E LL + + E C
Sbjct: 909 DEVRSTLLD--PQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVC 966
Query: 941 SEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQ 1000
+A R S+ +E ++ E + +P + LK+ A W A++ I NG +
Sbjct: 967 LQA-RPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKVEAIQ---NG--NN 1020
Query: 1001 HNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REK 1039
+ +++L + +G + +++D LP +E ++ A RE+
Sbjct: 1021 YAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRER 1060
Score = 119 (46.9 bits), Expect = 2.9e-116, Sum P(5) = 2.9e-116
Identities = 74/365 (20%), Positives = 155/365 (42%)
Query: 902 EIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 961
E D+ KL + + +LL Q S +++ S R ++++ ++ + +L
Sbjct: 780 ENDLFRKLRDAVKEAETCASVAQLLLSK-KQKHSRQSQDSGRTRTKLTMEELKAFVHQLF 838
Query: 962 DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQV 1021
+ + +K D + R + ++ D+ +L ++ G+ L +++
Sbjct: 839 SLPCVISQARQVKNLLDDVEEFHERAQEAMM------DEVPDSSKLQELIDMGSGLYVEL 892
Query: 1022 DDLPLVEVELKKAHCREKALKAC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGV 1077
+LP ++ EL++A ++ ++ LD ++++ V L EK +L +
Sbjct: 893 PELPRLKQELQQARWLDEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQEL 952
Query: 1078 LAAAMRWEERAADILIHKAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNS 1135
L + RWEE+A L + + M E I+ +++I LP++ ++ + A+ W
Sbjct: 953 LTVSERWEEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV 1012
Query: 1136 ELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ------ 1189
E A+ + + LE L++L ++ + + + L +LE + W+
Sbjct: 1013 E-------AIQNGN-NYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRT 1064
Query: 1190 ----NHASSLLQDARCLLDKDDIGD-GLSNSLVSKIEQLITSMESAANCGLSLGFDFHEI 1244
N + SLLQ L + DIG G S + + ++L ME L D +
Sbjct: 1065 FLKKNSSYSLLQ---VLSPRTDIGVYGSSKNRRKRAKEL---MEKEKEKDL----DLESL 1114
Query: 1245 SELQN 1249
SEL++
Sbjct: 1115 SELED 1119
Score = 87 (35.7 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +C+ C + E + L+C C D YH CL P D + + CP C
Sbjct: 294 VDLYVCLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKC 343
Score = 78 (32.5 bits), Expect = 7.7e-118, Sum P(4) = 7.7e-118
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +C+CRK M+ C C +W+H CV L
Sbjct: 1161 RIEEVKFCVCRKTASG-FMLQCELCKDWFHSSCVPL 1195
Score = 77 (32.2 bits), Expect = 6.3e-118, Sum P(5) = 6.3e-118
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEESSTP 1761
C++P +K + C CDEW+H CV + ++ E YIC C K + S+P
Sbjct: 1619 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKTMQGPSSP 1673
Score = 75 (31.5 bits), Expect = 1.2e-111, Sum P(5) = 1.2e-111
Identities = 44/201 (21%), Positives = 83/201 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL S + E + VNE +P P
Sbjct: 945 AMAELQELLTVSERWEEKAKVCLQARPRQSMMA---LEGI----VNEAKN---IPAYLPN 994
Query: 825 HLILQNYAEEARSLIQEINAALSA--CSKISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ + AR ++ A + + + +LE L ++ +P+ + +L ++++A
Sbjct: 995 VLALKEALQRARDWTAKVEAIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAA 1054
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ WR+ + K + Y L L++ P TD + + G +++ R R E
Sbjct: 1055 RAWRERTGRTFLKKNSS-------YSL------LQVLSPRTD--IGVYGSSKNRRKRAKE 1099
Query: 943 ALRGSMSLKTVEL-LLQELGD 962
+ K ++L L EL D
Sbjct: 1100 LMEKEKE-KDLDLESLSELED 1119
Score = 66 (28.3 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 1709 LY-CI-CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
LY C+ C + +E ++ C CD+ YH C+ + P++ + C C AEE + P+
Sbjct: 296 LYVCLFCGRGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGDWRCPKCV--AEECNKPR 352
Query: 1763 NVDG 1766
G
Sbjct: 353 EAFG 356
Score = 60 (26.2 bits), Expect = 7.2e-110, Sum P(4) = 7.2e-110
Identities = 30/157 (19%), Positives = 63/157 (40%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVF-DRQSNSALDFAL 1607
V+ A + K L D+ +F + + + + + +G++ + L L
Sbjct: 843 VISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELIDMGSGLYVELPELPRLKQEL 902
Query: 1608 ARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQW 1663
+ W V L + T+ ++ + G+ ++P H +K M EL + +W
Sbjct: 903 QQARWLDEVRSTLLDPQRVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSERW 959
Query: 1664 ADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKEL 1700
+ AK + S+ + ++ E +N+P YL L
Sbjct: 960 EEKAKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVL 996
Score = 60 (26.2 bits), Expect = 7.2e-110, Sum P(4) = 7.2e-110
Identities = 70/371 (18%), Positives = 145/371 (39%)
Query: 1158 LKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA-SSLLQDARCLLD--KDDIGDGLSN 1214
L++L+ L + L E L++ + RW + S+LL R LD K I G+
Sbjct: 878 LQELIDMGSGLYVELPELPRLKQELQQA-RWLDEVRSTLLDPQRVTLDVMKKLIDSGVGL 936
Query: 1215 SLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSP--SLED 1272
+ +E+ + ++ +SE W +KA L P S+
Sbjct: 937 APHHAVEKAMAELQELLT-----------VSE--------RWEEKAKVCLQARPRQSMMA 977
Query: 1273 VESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGC 1331
+E ++ A+ + + + L +L W + +E I + L +E + A
Sbjct: 978 LEGIVNEAKNIPAYLPNVLALKEALQRARDWTAK-VEAIQNGNNY--AYLEQLENLSAKG 1034
Query: 1332 KGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE 1391
+ I + +L S + + W+E+ + F LK S+SL+ L + + +
Sbjct: 1035 RPIPVRLDA-LPQLESQVAAARAWRERTGRTF-LK-KNSSYSLLQVLSPRTDIGVYGSSK 1091
Query: 1392 LEKVLSKVDKVENWKQRCKEIVGTS--------VGDKNSLLGLLQKIKQSVHRSLYIYNK 1443
+ +K + +E K++ ++ S D +++ + ++ +Q +++
Sbjct: 1092 NRRKRAK-ELMEKEKEKDLDLESLSELEDGLEEARDTAAVVAIFKEREQKEIEAMHTLRA 1150
Query: 1444 PH-GSVSMT-------LCMCCESDSKELEFLICSACKDCYHLQC--LRPTEVDRNHAE-- 1491
+ ++M C+C ++ S + L C CKD +H C L T + +
Sbjct: 1151 ANLAKMTMVDRIEEVKFCVCRKTASGFM--LQCELCKDWFHSSCVPLPKTSSQKKGSSWQ 1208
Query: 1492 ----AYICPYC 1498
++CP C
Sbjct: 1209 AKEVKFLCPLC 1219
Score = 60 (26.2 bits), Expect = 7.2e-110, Sum P(4) = 7.2e-110
Identities = 80/384 (20%), Positives = 146/384 (38%)
Query: 828 LQNYAEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSA 882
L+ ++AR L E+ + L +++ ++ L GL P VE +L + ++ +
Sbjct: 898 LKQELQQARWL-DEVRSTLLDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVS 956
Query: 883 KVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
+ W + + C+ + P + L + +EA ++ +P L + + +A A+ E
Sbjct: 957 ERWEEKAKVCLQAR-PRQ-SMMALEGIVNEAKNIPAYLPNVLALKEALQRARDWTAKV-E 1013
Query: 943 ALRGSMSLKTVELL--LQELG-DFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKD 999
A++ + +E L L G V + L L+ + A W R + N
Sbjct: 1014 AIQNGNNYAYLEQLENLSAKGRPIPVRLDALPQLESQVAAARAWRERTGRTFLKKNSSYS 1073
Query: 1000 QHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAE 1059
V+ I G+S + L+E E +K E + D L+ R A
Sbjct: 1074 LLQVLSPRTDIGVYGSSKNRRKRAKELMEKEKEKDLDLESLSELEDG---LEEARDTAAV 1130
Query: 1060 AVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL- 1118
I + ERE+ I+ L AA + D I + + C + R + F++ L
Sbjct: 1131 VAIFK-EREQKEIEAMHTLRAANLAKMTMVD-RIEEVKFC----VCRKTASGFMLQCELC 1184
Query: 1119 -DEVQNE---ISTAKSWLKNSELFLASAFAVAPASCSLLR--LESLKDLVSQSKFLKISL 1172
D + + S K S + P R LE++ L+ + L + L
Sbjct: 1185 KDWFHSSCVPLPKTSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRL 1244
Query: 1173 KEQTELEKVINNCERWQNHASSLL 1196
E L+ + WQ+ A L
Sbjct: 1245 PEGEALQCLTERAMSWQDRARQAL 1268
Score = 51 (23.0 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 239 VDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLS-PPLKHVPRGN-WYCLE 292
VD+ +E+ +C + SG ML C+ C +H C+ P +G+ W E
Sbjct: 1159 VDRIEEVKFCVCRKTASGF----MLQCELCKDWFHSSCVPLPKTSSQKKGSSWQAKE 1211
Score = 50 (22.7 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 11/58 (18%), Positives = 28/58 (48%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ D+ + +C + C+ +V + CD C++ +H C+ + ++ C+ C
Sbjct: 1605 EESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINC 1662
Score = 48 (22.0 bits), Expect = 1.3e-108, Sum P(4) = 1.3e-108
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFK------RCKLSDVEEVLAGCKGI--NFSF 1338
SL++GVK W+ R E +SA K R L D E+ +
Sbjct: 730 SLLYGVKVRAQSYDTWVSRVTEALSANLNHKKDVIELRVMLEDAEDRKYPENDLFRKLRD 789
Query: 1339 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSL-MLQLKE-LGEAAAFDC--PELEK 1394
V E +++ + L ++Q H + + L M +LK + + + C + +
Sbjct: 790 AVKEAETCASVAQLLLSKKQKHSRQSQDSGRTRTKLTMEELKAFVHQLFSLPCVISQARQ 849
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + V D + L L+
Sbjct: 850 VKNLLDDVEEFHERAQEAMMDEVPDSSKLQELI 882
Score = 47 (21.6 bits), Expect = 1.7e-108, Sum P(4) = 1.7e-108
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1231 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1269
Score = 46 (21.3 bits), Expect = 6.3e-118, Sum P(5) = 6.3e-118
Identities = 21/94 (22%), Positives = 41/94 (43%)
Query: 1346 TSAIQKHKLWQEQVHQFFNLKCAQQS-------WSLMLQLKELGEAAAFDCPELEKVLSK 1398
TS+ +K WQ + +F C + SL++ L++L PE E +
Sbjct: 1198 TSSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKL----PVRLPEGEALQCL 1253
Query: 1399 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
++ +W+ R ++ + T + +S L L + Q
Sbjct: 1254 TERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1285
Score = 43 (20.2 bits), Expect = 4.3e-108, Sum P(4) = 4.3e-108
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 1359 VHQFFNLKC----AQQSWSLMLQLKELGEAA--AF--DCPELEKVLSKVD 1400
VHQ F+L C A+Q +L+ ++E E A A + P+ K+ +D
Sbjct: 834 VHQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQELID 883
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 942 (336.7 bits), Expect = 7.5e-118, Sum P(4) = 7.5e-118
Identities = 196/467 (41%), Positives = 277/467 (59%)
Query: 229 DQERVKVCHKVDKEDE-LD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG 286
+QER K + K +D +C C SG + +LLCD C+ +H +CL PPL VP+G
Sbjct: 253 EQERDKAKARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKG 312
Query: 287 NWYCLECL----NSDKDSFGFVPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKK 339
+W C +CL N +++FGF R YT+ +F +AD K F +EK+
Sbjct: 313 DWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE 372
Query: 340 FWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDH----RPESVDANVWNEYCNSPWNLN 395
FW +V +V V YG+D+ + +GSGFP V D RPE EY +S WNLN
Sbjct: 373 FWRLVSTIEEDVTVEYGADIASKEFGSGFP-VRDGKFKVRPEE------EEYLDSGWNLN 425
Query: 396 NLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV 455
N+P ++ S+L + +I G+ +PWLY+GM FS+FCWH EDH YS+NY HWG+PK WY
Sbjct: 426 NMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGA 485
Query: 456 PGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITF 515
PG A E VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITF
Sbjct: 486 PGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITF 545
Query: 516 PRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD- 573
PR+YH+GFN G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D
Sbjct: 546 PRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADI 605
Query: 574 LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQ 633
LD V+ +++++ + E+M RE++ + G+ S + P+ ++ C C+
Sbjct: 606 LDVVVASTVQKDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKT 660
Query: 634 YLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
++SAV C C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 661 TCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 707
Score = 187 (70.9 bits), Expect = 7.5e-118, Sum P(4) = 7.5e-118
Identities = 45/126 (35%), Positives = 70/126 (55%)
Query: 32 VYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQL 91
V+ P+ +EF DP +I +R AE+ GICK+ PP W+PPFA D+ F + Q +++L
Sbjct: 1 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNEL 59
Query: 92 QARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKE 151
+A++ F + ++F E G L K E + LDL +L GG+D V KE
Sbjct: 60 EAQTRV--KLNFLDQIAKFW-ELQGCTL-KIPHVERKILDLFQLNRLVAEEGGFDVVCKE 115
Query: 152 KKWGEV 157
+KW ++
Sbjct: 116 RKWTKI 121
Score = 130 (50.8 bits), Expect = 7.5e-118, Sum P(4) = 7.5e-118
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 711 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 768
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 769 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 828
Query: 991 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 1042
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 829 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 888
Query: 1043 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 1097
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 889 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 948
Query: 1098 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 949 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1000
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 1209
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1001 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1060
Query: 1210 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 1267
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1061 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1113
Query: 1268 PSLEDVESLMAVAEG 1282
+E + SL A EG
Sbjct: 1114 KEMEALRSLRAANEG 1128
Score = 102 (41.0 bits), Expect = 5.6e-18, Sum P(4) = 5.6e-18
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 265 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 319
Score = 81 (33.6 bits), Expect = 7.5e-118, Sum P(4) = 7.5e-118
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1651 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1708
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1086 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1141
Query: 1709 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1752
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1142 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1185
Score = 80 (33.2 bits), Expect = 6.5e-115, Sum P(5) = 6.5e-115
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 802 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 859
Query: 912 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 967
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 860 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 918
Query: 968 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 1021
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 919 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 977
Query: 1022 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 1079
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 978 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1027
Query: 1080 AAMRWEERAADILI 1093
W+E AA+ +
Sbjct: 1028 EVQAWKECAANTFL 1041
Score = 76 (31.8 bits), Expect = 3.0e-111, Sum P(4) = 3.0e-111
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 1213
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 739 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 797
Query: 1214 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 1273
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 798 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 853
Query: 1274 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 1333
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 854 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 910
Query: 1334 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 1390
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 911 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 968
Query: 1391 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 1429
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 969 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1008
Score = 72 (30.4 bits), Expect = 2.6e-117, Sum P(5) = 2.6e-117
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1713 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1501
Score = 72 (30.4 bits), Expect = 6.5e-115, Sum P(5) = 6.5e-115
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1192 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1249
Score = 71 (30.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 265 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCL--AQ 322
Query: 1757 ESSTPQNVDG 1766
E + PQ G
Sbjct: 323 ECNKPQEAFG 332
Score = 67 (28.6 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGN--WYCLECLNSDK 298
M+ C+ C +H C+S P H +G W C +C S+K
Sbjct: 1152 MIQCELCRGFFHTGCVSVP--HALQGPRVWLCPQCRRSEK 1189
Score = 65 (27.9 bits), Expect = 3.7e-107, Sum P(4) = 3.7e-107
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1608 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1665
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 938 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 985
Query: 1666 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1715
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 986 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1045
Query: 1716 PYDEKAMIACYQCD 1729
PY ++ C +CD
Sbjct: 1046 PYSLLEVL-CPRCD 1058
Score = 63 (27.2 bits), Expect = 3.3e-110, Sum P(5) = 3.3e-110
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 923 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 967
Score = 59 (25.8 bits), Expect = 1.5e-113, Sum P(5) = 1.5e-113
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1077 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 1125
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1218 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1276
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 1182
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1277 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1333
Score = 59 (25.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 240 DKEDELDQICEQ--CKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D EDE D IC C EV + CD CN+ +H C+ + + ++ C C
Sbjct: 1445 DSEDE-DAICPAVTCLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1501
Score = 58 (25.5 bits), Expect = 1.3e-112, Sum P(5) = 1.3e-112
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 961 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1019
Query: 873 EKLSQRISSAKVWRD 887
+L ++ + W++
Sbjct: 1020 PRLESLVAEVQAWKE 1034
Score = 57 (25.1 bits), Expect = 2.5e-115, Sum P(4) = 2.5e-115
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1458 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1501
Score = 47 (21.6 bits), Expect = 2.9e-105, Sum P(4) = 2.9e-105
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 880 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 937
Query: 1721 A 1721
A
Sbjct: 938 A 938
Score = 45 (20.9 bits), Expect = 2.6e-117, Sum P(5) = 2.6e-117
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 1445
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1210 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1268
Query: 1446 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1494
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1269 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1318
Score = 44 (20.5 bits), Expect = 3.3e-110, Sum P(5) = 3.3e-110
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + +K SL+ I++S
Sbjct: 706 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 749
Score = 41 (19.5 bits), Expect = 7.7e-111, Sum P(5) = 7.7e-111
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 783 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 840
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 973 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1027
Query: 841 EINA 844
E+ A
Sbjct: 1028 EVQA 1031
Score = 40 (19.1 bits), Expect = 3.9e-109, Sum P(6) = 3.9e-109
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 940 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 995
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1181 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1237
Score = 40 (19.1 bits), Expect = 1.7e-107, Sum P(5) = 1.7e-107
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 830 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 887
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1224 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1281
Query: 888 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 935
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1282 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
Score = 38 (18.4 bits), Expect = 6.2e-109, Sum P(6) = 6.2e-109
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 916 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 950
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1205 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1240
Score = 37 (18.1 bits), Expect = 3.0e-111, Sum P(5) = 3.0e-111
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 1130
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1308 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1338
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(3) = 5.3e-13
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1716 PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYIC 1748
P DE+ CY+C + V P + +C
Sbjct: 649 PDDERQ---CYKCKTTCFMSAVYCPCKPGLLVC 678
Score = 37 (18.1 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 252 CKSGLHGEVMLLCDRCNKG 270
C++ + + +LC RC+ G
Sbjct: 1042 CENSPYSLLEVLCPRCDIG 1060
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 942 (336.7 bits), Expect = 9.0e-118, Sum P(4) = 9.0e-118
Identities = 196/467 (41%), Positives = 277/467 (59%)
Query: 229 DQERVKVCHKVDKEDE-LD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG 286
+QER K + K +D +C C SG + +LLCD C+ +H +CL PPL VP+G
Sbjct: 264 EQERDKAKARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKG 323
Query: 287 NWYCLECL----NSDKDSFGFVPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKK 339
+W C +CL N +++FGF R YT+ +F +AD K F +EK+
Sbjct: 324 DWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE 383
Query: 340 FWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDH----RPESVDANVWNEYCNSPWNLN 395
FW +V +V V YG+D+ + +GSGFP V D RPE EY +S WNLN
Sbjct: 384 FWRLVSTIEEDVTVEYGADIASKEFGSGFP-VRDGKFKVRPEE------EEYLDSGWNLN 436
Query: 396 NLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV 455
N+P ++ S+L + +I G+ +PWLY+GM FS+FCWH EDH YS+NY HWG+PK WY
Sbjct: 437 NMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGA 496
Query: 456 PGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITF 515
PG A E VM+ P+LF++QPDLL QLVT++NP+ L+ +GVPVY Q G FVITF
Sbjct: 497 PGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITF 556
Query: 516 PRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD- 573
PR+YH+GFN G N AEAVNF DWLP G + Y+ + V SH+E++C +A K+D
Sbjct: 557 PRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMASKADI 616
Query: 574 LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQ 633
LD V+ +++++ + E+M RE++ + G+ S + P+ ++ C C+
Sbjct: 617 LDVVVASTVQKDMAIMIDDEKMLREKVQKLGVTDSERVAFELFPD-----DERQCYKCKT 671
Query: 634 YLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
++SAV C C+P VCL H E LC C T + L YR+TL ELY +
Sbjct: 672 TCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYQYKLGYRYTLEELYPM 718
Score = 187 (70.9 bits), Expect = 9.0e-118, Sum P(4) = 9.0e-118
Identities = 45/126 (35%), Positives = 70/126 (55%)
Query: 32 VYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQL 91
V+ P+ +EF DP +I +R AE+ GICK+ PP W+PPFA D+ F + Q +++L
Sbjct: 12 VFEPSWEEFADPFAFIM-LRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNEL 70
Query: 92 QARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKE 151
+A++ F + ++F E G L K E + LDL +L GG+D V KE
Sbjct: 71 EAQTRV--KLNFLDQIAKFW-ELQGCTL-KIPHVERKILDLFQLNRLVAEEGGFDVVCKE 126
Query: 152 KKWGEV 157
+KW ++
Sbjct: 127 RKWTKI 132
Score = 130 (50.8 bits), Expect = 9.0e-118, Sum P(4) = 9.0e-118
Identities = 94/435 (21%), Positives = 178/435 (40%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + + +K E +LK P+ D+L L+++ Q
Sbjct: 722 LKMRAESYNEWASNVNEALEAKISNKRSL-ISFKALIEESELK-KFPDNDLLRHLRLVTQ 779
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
A+ C + + L G + + TVN L + + Y + L D+
Sbjct: 780 DADKCASVAQQLLNGKRQTRYRSGGGKCPNQLTVNELRLFVRQLYALPCVLSQTPLLKDL 839
Query: 991 LVNINGRKDQHNVI--DELNCI--LKEGASLRIQVD-DLP-LVE--VELKKAHCREKALK 1042
L + + Q + +E+ L+E + D DLP L E V L++A E
Sbjct: 840 LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM 899
Query: 1043 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 1097
A + LD +R++ V L EK L +L + W+++A +++ + +
Sbjct: 900 ASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ 959
Query: 1098 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ ++ ++I LPS +++ + A+ WL+ E P L+
Sbjct: 960 SLSSLVVAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQVGGRV--PV------LD 1011
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA-----RCLLDKDDIG 1209
+L +LV++ + + + L LE ++ + W+ A++ L +++ L + DIG
Sbjct: 1012 TLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENSPYSLLEVLCPRCDIG 1071
Query: 1210 DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVS-- 1267
+ L K ++L M S L +S+L+ A S A++ L +
Sbjct: 1072 ---TLGLKRKQKKLKEPMPSGKKRSTKL----ESLSDLERALSESKDTASAMATLGEARL 1124
Query: 1268 PSLEDVESLMAVAEG 1282
+E + SL A EG
Sbjct: 1125 KEMEALRSLRAANEG 1139
Score = 102 (41.0 bits), Expect = 5.8e-18, Sum P(4) = 5.8e-18
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
KP +V + +C+ C S + E L+C C D YH CL P D + + CP C
Sbjct: 276 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPQC 330
Score = 81 (33.6 bits), Expect = 9.0e-118, Sum P(4) = 9.0e-118
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 1651 QKLMELNRIGSQWADVAKKVV-LDSGALS-LDKVFELIAEGENLPVYLEKELKSLRARSM 1708
+ L +L R S+ D A + L L ++ + L A E V +E L+
Sbjct: 1097 ESLSDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG-KVLCSEEDAELKV--- 1152
Query: 1709 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL---LSAPEIYICAACK 1752
C+C+K MI C C ++H CV + L P +++C C+
Sbjct: 1153 --CVCQKE-PAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPQCR 1196
Score = 80 (33.2 bits), Expect = 8.2e-115, Sum P(5) = 8.2e-115
Identities = 53/254 (20%), Positives = 106/254 (41%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL L + LP + ++ L + + ++ +K +S + P+A E+ L +
Sbjct: 813 VNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQQQSQKLLSEEMPSAAELQELLDV-- 870
Query: 912 EALDLKIDVPETDMLLKMIGQAESCR-ARCSEALRGSMSLKTVELLLQE---LGDFTVNM 967
+ D +D+P+ L + QA + + A + S++L + L+ L +
Sbjct: 871 -SFDFDVDLPQLAELRVRLEQARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVE 929
Query: 968 PELELLKQYHSDAIFWIARLNDILVNINGRKDQHNV------IDELNCILKEGASLRIQV 1021
+ L++ + + W + + L+ R+ ++ I+E+ L GA+L+ V
Sbjct: 930 KAMAKLQELLTVSEHWDDKARN-LIKARPRQSLSSLVVAVKEIEEIPAYLPSGAALKDAV 988
Query: 1022 DDLP--LVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLA 1079
L EVE + R L DT + L VT I + + L L ++A
Sbjct: 989 QKAQDWLQEVEALQVGGRVPVL---DTLVEL-----VTRGRSI-PVHLDYL-PRLESLVA 1038
Query: 1080 AAMRWEERAADILI 1093
W+E AA+ +
Sbjct: 1039 EVQAWKECAANTFL 1052
Score = 76 (31.8 bits), Expect = 3.7e-111, Sum P(4) = 3.7e-111
Identities = 56/280 (20%), Positives = 107/280 (38%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLS 1213
L S K L+ +S+ K + L V + ++ + A LL R + G
Sbjct: 750 LISFKALIEESELKKFPDNDLLRHLRLVTQDADKCASVAQQLLNGKRQTRYRSG-GGKCP 808
Query: 1214 NSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 1273
N L +L A C LS ++ + A +K LS PS ++
Sbjct: 809 NQLTVNELRLFVRQLYALPCVLSQTPLLKDLLDRVEAFQ--QQSQKLLS--EEMPSAAEL 864
Query: 1274 ESLMAVAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKG 1333
+ L+ V+ + +WL+ +V A + L D+ ++ G
Sbjct: 865 QELLDVSFDFDVDLPQLAELRVRLEQARWLE---DVQMASAEQNSLTLDDMRRLIDSGVG 921
Query: 1334 INFSFPVV---IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCP 1390
+ +P V + +L + + W ++ + Q SL++ +KE+ E A+ P
Sbjct: 922 LA-PYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAY-LP 979
Query: 1391 ELEKVLSKVDKVENWKQRCKEI-VGTSVGDKNSLLGLLQK 1429
+ V K ++W Q + + VG V ++L+ L+ +
Sbjct: 980 SGAALKDAVQKAQDWLQEVEALQVGGRVPVLDTLVELVTR 1019
Score = 72 (30.4 bits), Expect = 3.2e-117, Sum P(5) = 3.2e-117
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1713 CRKPYDEKA-MIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C +P E+ + C C++W+H CV + ++ E YICA+C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1512
Score = 72 (30.4 bits), Expect = 8.2e-115, Sum P(5) = 8.2e-115
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A +L L +D +G GL
Sbjct: 1203 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSGL 1260
Score = 71 (30.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 276 KPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCL--AQ 333
Query: 1757 ESSTPQNVDG 1766
E + PQ G
Sbjct: 334 ECNKPQEAFG 343
Score = 67 (28.6 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGN--WYCLECLNSDK 298
M+ C+ C +H C+S P H +G W C +C S+K
Sbjct: 1163 MIQCELCRGFFHTGCVSVP--HALQGPRVWLCPQCRRSEK 1200
Score = 65 (27.9 bits), Expect = 4.5e-107, Sum P(4) = 4.5e-107
Identities = 36/134 (26%), Positives = 56/134 (41%)
Query: 1608 ARNLWRVRVSKLLEGLTKPT--IGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWAD 1665
ARNL + R + L L I +I YL G + KD QK + W
Sbjct: 949 ARNLIKARPRQSLSSLVVAVKEIEEIPAYLPSGAAL----KDAV-QKAQD-------WLQ 996
Query: 1666 VAKKVVLDSGALSLDKVFELIAEGENLPVYLE--KELKSLRARSMLY--C-----ICRK- 1715
+ + + LD + EL+ G ++PV+L+ L+SL A + C +C
Sbjct: 997 EVEALQVGGRVPVLDTLVELVTRGRSIPVHLDYLPRLESLVAEVQAWKECAANTFLCENS 1056
Query: 1716 PYDEKAMIACYQCD 1729
PY ++ C +CD
Sbjct: 1057 PYSLLEVL-CPRCD 1069
Score = 63 (27.2 bits), Expect = 4.1e-110, Sum P(5) = 4.1e-110
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
KL EL + W D A+ ++ SL + + E E +P YL
Sbjct: 934 KLQELLTVSEHWDDKARNLIKARPRQSLSSLVVAVKEIEEIPAYL 978
Score = 59 (25.8 bits), Expect = 1.9e-113, Sum P(5) = 1.9e-113
Identities = 27/119 (22%), Positives = 53/119 (44%)
Query: 1077 VLAAAMRWEERAADILIHKAQMCEFEDIIRAS------QDIFVVLPSLDEVQNEI----- 1125
++ + W+ RA +L + + +D + + Q LP ++V I
Sbjct: 1229 MIERTVNWQHRAQQML-YSGNLKLLQDKVGSGLLYNRWQSTAGPLPETNKVSQTIGAMSF 1287
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 1182
S W N ++L S F+ C L + S L +L+ +++ L++SL E EL +++
Sbjct: 1288 SMPHDW-DNRTIYLHSPFSTGQ-QCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQIL 1344
Score = 59 (25.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 240 DKEDELDQICEQ--CKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D EDE D IC C EV + CD CN+ +H C+ + + ++ C C
Sbjct: 1456 DSEDE-DAICPAVTCLQPEGEEVDWVQCDGSCNQWFHQVCVGISPEMAEKEDYICASC 1512
Score = 58 (25.5 bits), Expect = 1.6e-112, Sum P(5) = 1.6e-112
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ ++A+ +QE+ A L ++ L+ L +R +P+ +
Sbjct: 972 EEIPAYLPSGAALKDAVQKAQDWLQEVEA-LQVGGRVPVLDTLVELVTRGRSIPVHLDYL 1030
Query: 873 EKLSQRISSAKVWRD 887
+L ++ + W++
Sbjct: 1031 PRLESLVAEVQAWKE 1045
Score = 57 (25.1 bits), Expect = 3.0e-115, Sum P(4) = 3.0e-115
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + +E++++ C +C +H C+ + + E YIC C
Sbjct: 1469 CLQPEGEEVDWVQCDGSCNQWFHQVCVGISP-EMAEKEDYICASC 1512
Score = 47 (21.6 bits), Expect = 3.4e-105, Sum P(4) = 3.4e-105
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + + + +L+LD + LI G L Y E + + +L + +D+K
Sbjct: 891 ARWLEDVQMASAEQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELL--TVSEHWDDK 948
Query: 1721 A 1721
A
Sbjct: 949 A 949
Score = 45 (20.9 bits), Expect = 3.2e-117, Sum P(5) = 3.2e-117
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNKPH 1445
PE + + +++ NW+ R ++++ + + DK GLL QS L NK
Sbjct: 1221 PEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGS-GLLYNRWQSTAGPLPETNKVS 1279
Query: 1446 GSV-SMTLCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNHAEAYI 1494
++ +M+ M + D++ + +L S + C L + TE+D EA +
Sbjct: 1280 QTIGAMSFSMPHDWDNRTI-YLHSPFSTGQQCIPLHVVS-TELDELMMEAQL 1329
Score = 44 (20.5 bits), Expect = 4.1e-110, Sum P(5) = 4.1e-110
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + +K SL+ I++S
Sbjct: 717 PMMNALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEES 760
Score = 41 (19.5 bits), Expect = 9.7e-111, Sum P(5) = 9.7e-111
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 783 IRDCLHKAENWSSLPGSDSEKV--RLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQ 840
++D + KA++W L ++ +V R+ ++ L+ + P HL +Y SL+
Sbjct: 984 LKDAVQKAQDW--LQEVEALQVGGRVPVLDTLVELVTRGRSIPVHL---DYLPRLESLVA 1038
Query: 841 EINA 844
E+ A
Sbjct: 1039 EVQA 1042
Score = 40 (19.1 bits), Expect = 5.1e-109, Sum P(6) = 5.1e-109
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 940 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 995
C + R L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1192 CPQCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGN 1248
Score = 40 (19.1 bits), Expect = 2.1e-107, Sum P(5) = 2.1e-107
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 830 NYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRIS--SAKVWRD 887
N+ A+ ++ N L K+ LLY+R + E+ K+SQ I S + D
Sbjct: 1235 NWQHRAQQMLYSGNLKLLQ-DKVGS-GLLYNRWQSTAGPLPETNKVSQTIGAMSFSMPHD 1292
Query: 888 SVRKCI--------SNKC-PAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 935
+ I +C P + L +L EA L++ +PE L +++ +S
Sbjct: 1293 WDNRTIYLHSPFSTGQQCIPLHVVSTELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
Score = 38 (18.4 bits), Expect = 8.2e-109, Sum P(6) = 8.2e-109
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 916 LKIDVPETDMLLKMIGQAESCRARCSEAL-RGSMSL 950
+++ +PE D L MI + + + R + L G++ L
Sbjct: 1216 IRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKL 1251
Score = 37 (18.1 bits), Expect = 3.7e-111, Sum P(5) = 3.7e-111
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKS 1130
E ++++ +Q + V LP + E+ + T +S
Sbjct: 1319 ELDELMMEAQLLQVSLPEIQELYQILFTKQS 1349
Score = 37 (18.1 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1716 PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYIC 1748
P DE+ CY+C + V P + +C
Sbjct: 660 PDDERQ---CYKCKTTCFMSAVYCPCKPGLLVC 689
Score = 37 (18.1 bits), Expect = 2.4e-12, Sum P(4) = 2.4e-12
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 252 CKSGLHGEVMLLCDRCNKG 270
C++ + + +LC RC+ G
Sbjct: 1053 CENSPYSLLEVLCPRCDIG 1071
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 932 (333.1 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
Identities = 190/446 (42%), Positives = 267/446 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL----NSDKDSFGF 303
+C C G + + +LLCD C+ +H +CL PPL VP+G+W C +C+ N +++FGF
Sbjct: 295 VCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGF 354
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 355 EQAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADIS 414
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D R + + EY S WNLNN+P L+ S+L ++ +I+G+ VPWL
Sbjct: 415 SKDFGSGFP-VKDGRRKMLPEE--EEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VP A E+VMR P+LF++QPD
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPD 531
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP++L+E+GVPVY Q G FV+TFPR+YH+GFN G N AEAVNF ADW
Sbjct: 532 LLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADW 591
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+ +A LD ++ + +EL + +E RE
Sbjct: 592 LPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRE 651
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G++ M + E V +++ C CR +LSA+ C C P VCL H L
Sbjct: 652 SVVQMGVL----MSEEEVFELV-PDDERQCSACRTTCFLSALTCSCNPERLVCLYHPNDL 706
Query: 659 CECKTRKLHLLYRHTLAELYDLFLTV 684
C C +K L YR+ L +L L V
Sbjct: 707 CPCPMQKKCLRYRYPLEDLPSLLYGV 732
Score = 226 (84.6 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
Identities = 52/127 (40%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNE 79
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A + F + ++F E G+ L V E + LDL L GG++ V K
Sbjct: 80 LEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV-ERKILDLYALSKIVASKGGFEMVTK 135
Query: 151 EKKWGEV 157
EKKW +V
Sbjct: 136 EKKWSKV 142
Score = 100 (40.3 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
Identities = 84/378 (22%), Positives = 159/378 (42%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 735 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 789
Query: 932 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 986
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 790 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 845
Query: 987 LNDILVNING--RKDQHNVIDEL--NCILKEGASLRIQVDDLPLVEVELKKAHCR---EK 1039
+ ++L ++ + Q ++DE + L+ + + VD + + R E
Sbjct: 846 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMALVVDXXXXSPTKARSQQARWLDEV 905
Query: 1040 ALKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKA 1096
L D + + LD ++++ V L EK +L +L + RWEE+A L +
Sbjct: 906 RLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARP 965
Query: 1097 Q--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLR 1154
+ + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 966 RHSVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVE-------AIQSGS-NYAY 1017
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQ--DARCLLD----KDD 1207
LE L+ L ++ + + + L ++E + W+ + L+ + LL + D
Sbjct: 1018 LEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTD 1077
Query: 1208 IGD-GLSNSLVSKIEQLI 1224
IG G + K+++LI
Sbjct: 1078 IGIYGSGKNRRKKVKELI 1095
Score = 90 (36.7 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
V + +CM C + E + L+C C D YH CL P D + + CP C
Sbjct: 291 VDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKC 340
Score = 78 (32.5 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 1713 CRKPYDEKA-MIACYQ-CDEWYHIDCVKL---LSAPEIYICAAC-KPQAEES 1758
C++P +K + C CDEW+H CV + ++ E YIC C K Q +S
Sbjct: 1613 CQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDS 1664
Score = 78 (32.5 bits), Expect = 2.3e-116, Sum P(4) = 2.3e-116
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 1704 RARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL 1739
R + +CICRK M+ C C +W+H CV L
Sbjct: 1155 RIEEVKFCICRKTASG-FMLQCELCKDWFHNSCVPL 1189
Score = 77 (32.2 bits), Expect = 7.9e-115, Sum P(5) = 7.9e-115
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 939 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 988
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 989 ILSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAA 1048
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 1049 RAWRERTGRTFLKKNSSHTLLQVL 1072
Score = 67 (28.6 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 1691 NLPVYLEKELKSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI---- 1745
N+ + K S+ + C+ C + +E ++ C CD+ YH C+ + P++
Sbjct: 276 NMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGD 334
Query: 1746 YICAACKPQAEESSTPQNVDG 1766
+ C C AEE + P+ G
Sbjct: 335 WRCPKCV--AEECNKPREAFG 353
Score = 65 (27.9 bits), Expect = 1.6e-112, Sum P(5) = 1.6e-112
Identities = 83/381 (21%), Positives = 147/381 (38%)
Query: 832 AEEARSLIQEINAALSACSKIS--ELELLYSRASGL-PICIVESE--KLSQRISSAKVWR 886
+++AR L E+ LS +++ ++ L GL P VE +L + ++ ++ W
Sbjct: 896 SQQARWL-DEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWE 954
Query: 887 DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG 946
+ + C+ + P + L + +EA ++ +P L + + +A A+ G
Sbjct: 955 EKAKVCLQAR-PRH-SVASLESIVNEAKNIPAFLPNILSLKEALQKAREWTAKVEAIQSG 1012
Query: 947 S--MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVI 1004
S L+ +E L + V + L ++ + A W R + N V+
Sbjct: 1013 SNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVL 1072
Query: 1005 DELNCI--LKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLDFIRQVTAEAVI 1062
I G + R +V +L +E E +K E D + L+ R TA V
Sbjct: 1073 SPRTDIGIYGSGKNRRKKVKEL--IEKEKEKDLDLEPL---SDLEEGLEETRD-TAMVVA 1126
Query: 1063 LQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSL--DE 1120
+ ERE+ I+ L AA + D I + + C I R + F++ L D
Sbjct: 1127 VFKEREQKEIEAMHSLRAANLAKMTMVD-RIEEVKFC----ICRKTASGFMLQCELCKDW 1181
Query: 1121 VQNE-ISTAKSWL-KNSELFLASAFAVAPASCSLLR---LESLKDLVSQSKFLKISLKEQ 1175
N + KS K + A C R LE++ L+ + L + L E
Sbjct: 1182 FHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEG 1241
Query: 1176 TELEKVINNCERWQNHASSLL 1196
L+ + WQ+ A L
Sbjct: 1242 EALQCLTERAMSWQDRARQAL 1262
Score = 65 (27.9 bits), Expect = 2.3e-109, Sum P(3) = 2.3e-109
Identities = 55/245 (22%), Positives = 96/245 (39%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ A + K L D+ +F + D S+KL + + + A V D S
Sbjct: 839 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI---DMALVVDXXXXSPTKAR 895
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
+ W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 896 SQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 952
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 953 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNIL-SLKEA------LQKAREWTAK 1005
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 1006 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLK-KNS 1064
Query: 1780 SPKHT 1784
S HT
Sbjct: 1065 S--HT 1067
Score = 55 (24.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDR-CNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
++ D+ + +C + C+ +V + CD C++ +H C+ + ++ C+ C
Sbjct: 1599 EESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAK 1658
Query: 296 SD-KDSFGFVP 305
DS G P
Sbjct: 1659 KQGPDSPGQAP 1669
Score = 53 (23.7 bits), Expect = 2.5e-112, Sum P(5) = 2.5e-112
Identities = 45/269 (16%), Positives = 119/269 (44%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L
Sbjct: 823 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQML----- 877
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
+D+ + V D +A S +AR + +R ++S + V L ++++L D V +
Sbjct: 878 --IDMALVV---DXXXXSPTKARSQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 932
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 933 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNIL 990
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + + L + +AAA
Sbjct: 991 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLDAL-PQVESQVAAAR 1049
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDI 1111
W ER + K ++ DI
Sbjct: 1050 AWRERTGRTFLKKNSSHTLLQVLSPRTDI 1078
Score = 52 (23.4 bits), Expect = 3.1e-117, Sum P(5) = 3.1e-117
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLR-PTEVDRNHAEA-------YICPYC 1498
C+C ++ S + L C CKD +H C+ P + + ++CP C
Sbjct: 1162 CICRKTASGFM--LQCELCKDWFHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLC 1213
Score = 50 (22.7 bits), Expect = 1.4e-15, Sum P(4) = 1.4e-15
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 239 VDKEDELDQ-ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
VD+ +E+ IC + SG ML C+ C +H C+ P
Sbjct: 1153 VDRIEEVKFCICRKTASGF----MLQCELCKDWFHNSCVPLP 1190
Score = 47 (21.6 bits), Expect = 8.4e-111, Sum P(4) = 8.4e-111
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 855 LELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCIS 894
L LL S LP+ + E E L A W+D R+ ++
Sbjct: 1225 LSLLVSLQK-LPVRLPEGEALQCLTERAMSWQDRARQALA 1263
Score = 42 (19.8 bits), Expect = 3.5e-116, Sum P(5) = 3.5e-116
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 1373 SLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ 1432
SL++ L++L PE E + ++ +W+ R ++ + T + +S L L + Q
Sbjct: 1226 SLLVSLQKL----PVRLPEGEALQCLTERAMSWQDRARQALATD--ELSSALAKLSVLSQ 1279
Score = 40 (19.1 bits), Expect = 4.6e-110, Sum P(4) = 4.6e-110
Identities = 45/245 (18%), Positives = 96/245 (39%)
Query: 1244 ISELQNACSTLH-WCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHG 1299
++ELQ + W +KA L P S+ +ES++ A+ + + + L +L
Sbjct: 940 MAELQELLTVSERWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNILSLKEALQKA 999
Query: 1300 VKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQV 1359
+W + +E I + + L +E + A + I + ++ S + + W+E+
Sbjct: 1000 REWTAK-VEAIQSGSNY--AYLEQLESLSAKGRPIPVRLDA-LPQVESQVAAARAWRERT 1055
Query: 1360 HQFFNLKCAQQSWSLMLQLKELGEAAAFDCPE--LEKVLSKVDKVENWKQRCKEIVGTSV 1417
+ F LK S +L+ L + + + +KV ++K + + +
Sbjct: 1056 GRTF-LK-KNSSHTLLQVLSPRTDIGIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEE 1113
Query: 1418 G--DKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDS-KELEFLICSACKDC 1474
G + ++ K+ + + H + L D +E++F IC
Sbjct: 1114 GLEETRDTAMVVAVFKEREQKEI---EAMHSLRAANLAKMTMVDRIEEVKFCICRKTASG 1170
Query: 1475 YHLQC 1479
+ LQC
Sbjct: 1171 FMLQC 1175
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1473 DCYHLQCL-RPTEVDRNHAEAYICPYC 1498
D +++Q R + N + Y+C +C
Sbjct: 273 DAFNMQMRQRKGTLSVNFVDLYVCMFC 299
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1668 KKVVLDSGAL-SLDKVFELIAEGE 1690
++ V+ G L S ++VFEL+ + E
Sbjct: 650 RESVVQMGVLMSEEEVFELVPDDE 673
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 938 (335.3 bits), Expect = 5.0e-117, Sum P(4) = 5.0e-117
Identities = 186/442 (42%), Positives = 268/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 313 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 372
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 373 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 432
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 433 SKEFGSGFP-VRDGKIKISPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 489
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 490 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPD 549
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 550 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 609
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 610 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 669
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ CI C+ ++SA++C C+P VCL H + L
Sbjct: 670 TVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKEL 724
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K +L YR+TL +LY +
Sbjct: 725 CSCPPYKYNLRYRYTLDDLYPM 746
Score = 196 (74.1 bits), Expect = 5.0e-117, Sum P(4) = 5.0e-117
Identities = 45/127 (35%), Positives = 72/127 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 33 PVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNE 92
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + +++ E G+ L K E + LDL +L GG+ V K
Sbjct: 93 LEAQTRV--KLNFLDQIAKYW-ELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCK 148
Query: 151 EKKWGEV 157
++KW ++
Sbjct: 149 DRKWTKI 155
Score = 132 (51.5 bits), Expect = 5.0e-117, Sum P(4) = 5.0e-117
Identities = 67/345 (19%), Positives = 144/345 (41%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 750 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 807
Query: 933 -AESCRARCSEALRGSMSLK--------TVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
AE C + + L G + +L + EL F + L +
Sbjct: 808 DAEKCASVAQQLLNGKRQTRYRSGGGKSQSQLTVNELRQFVTQLCALPCVLSQTPLLKDL 867
Query: 984 IARLNDILVNINGR-KDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 1042
+ R+ D ++ EL +L + +++ L + + L++A E+ +
Sbjct: 868 LNRVEDFQQQSQRLLSEERPRASELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQ 927
Query: 1043 AC--DTKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ- 1097
AC + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 928 ACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRH 987
Query: 1098 -MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ ++ ++I LP+ +++ + A+ W+++ + A P LE
Sbjct: 988 SLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQDVDALQAGGRV--PV------LE 1039
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS--LLQDA 1199
+L +LV++ + + + L LE +++ W+ A+ LL+++
Sbjct: 1040 TLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENS 1084
Score = 94 (38.1 bits), Expect = 9.4e-17, Sum P(5) = 9.4e-17
Identities = 22/65 (33%), Positives = 31/65 (47%)
Query: 1447 SVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SES 1505
+V + +C+ C S + E L+C C D YH CL P D + + CP C E S+
Sbjct: 308 AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGD-WRCPKCLAQECSKP 366
Query: 1506 VSQFG 1510
FG
Sbjct: 367 QEAFG 371
Score = 86 (35.3 bits), Expect = 5.1e-114, Sum P(5) = 5.1e-114
Identities = 51/265 (19%), Positives = 113/265 (42%)
Query: 1255 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 1311
HW KA S L P SL + + + E + + ++L +S+ W++ ++ +
Sbjct: 972 HWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYLPNGTVLKDSVQKARDWVQD-VDALQ 1030
Query: 1312 APCKFKRCKLSDVEEVLAGCKGINF---SFP---VVIGELTS---AIQKHKLWQEQVHQF 1362
A + L + E++A + I S P +++ E+ + + K L + +
Sbjct: 1031 AGGRVP--VLETLIELVARGRSIPVHLNSLPRLEMLVSEVHAWKESAAKTFLLENSPYSL 1088
Query: 1363 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 1422
+ C + L L LK P +K +K++ + + ++ E T+ +
Sbjct: 1089 LEVLCPRCDIGL-LGLKRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETA--SAMA 1145
Query: 1423 LLGLLQKIKQSVHRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHL 1477
LG + + +SL N+ P V +C+C ++ + + + C C+D +H
Sbjct: 1146 TLGEARLREMEALQSLRFANEEKLLSPAQDVETKVCLCQKTPATPM--IQCELCRDAFHT 1203
Query: 1478 QCLRPTEVDRNHAEAYICPYCQYFE 1502
C+ + + ++ + ++CP+C+ E
Sbjct: 1204 SCVAVSSISQS-SRIWLCPHCRRSE 1227
Score = 83 (34.3 bits), Expect = 7.2e-113, Sum P(5) = 7.2e-113
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P +L++ ++AR +Q+++A L A ++ LE L +R +P+ +
Sbjct: 1000 EEIPAYLPNGTVLKDSVQKARDWVQDVDA-LQAGGRVPVLETLIELVARGRSIPVHLNSL 1058
Query: 873 EKLSQRISSAKVWRDSVRK 891
+L +S W++S K
Sbjct: 1059 PRLEMLVSEVHAWKESAAK 1077
Score = 77 (32.2 bits), Expect = 4.4e-113, Sum P(5) = 4.4e-113
Identities = 54/246 (21%), Positives = 98/246 (39%)
Query: 984 IARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP--LVEVELKKAHCREKAL 1041
+AR I V++N ++ E++ KE A+ +++ P L+EV + L
Sbjct: 1045 VARGRSIPVHLNSLPRLEMLVSEVHA-WKESAAKTFLLENSPYSLLEVLCPRCDIGLLGL 1103
Query: 1042 KACDTKM--PLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADI-LIHKAQM 1098
K K+ PL ++ + + L L A A E R ++ + +
Sbjct: 1104 KRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETASAMATLGEARLREMEALQSLRF 1163
Query: 1099 CEFEDIIRASQDIF--VVL----PSLDEVQNEI---STAKSWLKNSELFLASAFAVAPAS 1149
E ++ +QD+ V L P+ +Q E+ + S + S + +S + P
Sbjct: 1164 ANEEKLLSPAQDVETKVCLCQKTPATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCP-H 1222
Query: 1150 CSLLR---LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 1206
C LE + L++ + +++ L E L +I WQ+ A LL L +D
Sbjct: 1223 CRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKLVQD 1282
Query: 1207 DIGDGL 1212
G GL
Sbjct: 1283 QAGSGL 1288
Score = 76 (31.8 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 1701 KSLRARSMLYCI-CRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAE 1756
K+ A + C+ C DE ++ C CD+ YH C+ L P+ + C C A+
Sbjct: 304 KTATAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCL--AQ 361
Query: 1757 ESSTPQNVDG 1766
E S PQ G
Sbjct: 362 ECSKPQEAFG 371
Score = 71 (30.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 240 DKEDELDQICE--QCKSGLHGEV-MLLCD-RCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
D EDE D IC C EV + CD CN+ +H C+ + + ++ C+ C
Sbjct: 1481 DSEDE-DAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTG 1539
Query: 296 SDKDS 300
D S
Sbjct: 1540 KDAPS 1544
Score = 70 (29.7 bits), Expect = 6.0e-117, Sum P(5) = 6.0e-117
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 1677 LSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIACY-QCD 1729
L ++ ++L+ AE +LP Y E+E C +P DE + C C+
Sbjct: 1453 LERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQCDGSCN 1512
Query: 1730 EWYHIDCVKL---LSAPEIYICAAC 1751
+W+H CV + ++ E YIC C
Sbjct: 1513 QWFHQVCVGVSPEMAEKEDYICVRC 1537
Score = 69 (29.3 bits), Expect = 5.0e-117, Sum P(4) = 5.0e-117
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 1697 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1752
EK L + C+C+K MI C C + +H CV + S + I++C C+
Sbjct: 1167 EKLLSPAQDVETKVCLCQKT-PATPMIQCELCRDAFHTSCVAVSSISQSSRIWLCPHCR 1224
Score = 68 (29.0 bits), Expect = 4.5e-107, Sum P(4) = 4.5e-107
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + ++ LDS +LSLD + LI G L Y E R + +L + +D+K
Sbjct: 919 ARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 976
Query: 1721 A 1721
A
Sbjct: 977 A 977
Score = 61 (26.5 bits), Expect = 2.6e-111, Sum P(5) = 2.6e-111
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
+L EL + W D AK ++ SL + + E E +P YL
Sbjct: 962 RLQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYL 1006
Score = 58 (25.5 bits), Expect = 5.1e-114, Sum P(5) = 5.1e-114
Identities = 22/111 (19%), Positives = 53/111 (47%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ ++ +S + P A E+ L + S
Sbjct: 841 VNELRQFVTQLCALPCVLSQTPLLKDLLNRVEDFQQQSQRLLSEERPRASELQQLLDV-S 899
Query: 912 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELG 961
D+++ + E + L+ E + C ++ S+SL + L+ +LG
Sbjct: 900 FTFDVELPQLAEMRIRLEQARWLEEVQQACLDS--SSLSLDDMRRLI-DLG 947
Score = 56 (24.8 bits), Expect = 9.6e-13, Sum P(4) = 9.6e-13
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDK 298
M+ C+ C +H C++ W C C S+K
Sbjct: 1191 MIQCELCRDAFHTSCVAVSSISQSSRIWLCPHCRRSEK 1228
Score = 55 (24.4 bits), Expect = 2.2e-115, Sum P(5) = 2.2e-115
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + E++++ C +C +H C+ + + E YIC C
Sbjct: 1494 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRC 1537
Score = 53 (23.7 bits), Expect = 9.7e-110, Sum P(5) = 9.7e-110
Identities = 43/180 (23%), Positives = 67/180 (37%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
DPLP + L++ ++ R+L + A SA + + E L A + EKL
Sbjct: 1112 DPLPSGKKRSTKLESLSDLERALTESKETA-SAMATLGEARLREMEALQ-SLRFANEEKL 1169
Query: 876 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAES 935
+S A+ V C+ K PA I +L +A + I
Sbjct: 1170 ---LSPAQDVETKV--CLCQKTPATPMIQC--ELCRDAFHTSCVAVSSISQSSRIWLCPH 1222
Query: 936 CRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN 995
CR SE L+ + LL L V +PE + L+ + W R +L + N
Sbjct: 1223 CRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGN 1276
Score = 50 (22.7 bits), Expect = 7.2e-113, Sum P(5) = 7.2e-113
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 1182
S + W N +L S F+ + L L + +L+ +++ L++SL E EL + +
Sbjct: 1316 SLPEDW-DNRTSYLHSPFSTGQSCIPLHGLSPEVNELLMEAQLLQVSLPEVQELYQTL 1372
Score = 48 (22.0 bits), Expect = 6.0e-110, Sum P(5) = 6.0e-110
Identities = 8/18 (44%), Positives = 14/18 (77%)
Query: 1679 LDKVFELIAEGENLPVYL 1696
L+ + EL+A G ++PV+L
Sbjct: 1038 LETLIELVARGRSIPVHL 1055
Score = 43 (20.2 bits), Expect = 3.9e-112, Sum P(5) = 3.9e-112
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +++ +Q + V LP + E+ + T S + ++ + V P+S L +
Sbjct: 1347 EVNELLMEAQLLQVSLPEVQELYQTLLTKPSSAQQAD----RSSPVRPSSEKNDCLRGKR 1402
Query: 1160 DLVSQSKFLKISLKEQTELEKVINNCERW 1188
D ++ L+ LK + E E + + ERW
Sbjct: 1403 DAINS---LERKLKRRPEREGLPS--ERW 1426
Score = 43 (20.2 bits), Expect = 1.6e-111, Sum P(5) = 1.6e-111
Identities = 32/144 (22%), Positives = 55/144 (38%)
Query: 752 EAEQFLWAGFEMDAVRDMVNKL---IEGRRWAEGIRD-CLHKAENWSSLPGSDSEKVRLD 807
E +Q L F D + ++ +E RW E ++ CL SSL D ++
Sbjct: 891 ELQQLLDVSFTFDVELPQLAEMRIRLEQARWLEEVQQACLDS----SSLSLDDMRRL--- 943
Query: 808 CVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
++ +G P E LQ + + + L A + S S L
Sbjct: 944 -IDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLRARPRHS--------LSSLAT 994
Query: 868 CIVESEKLSQRISSAKVWRDSVRK 891
+ E E++ + + V +DSV+K
Sbjct: 995 AVKEMEEIPAYLPNGTVLKDSVQK 1018
Score = 40 (19.1 bits), Expect = 6.0e-117, Sum P(5) = 6.0e-117
Identities = 5/26 (19%), Positives = 16/26 (61%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGT 1415
PE + + +++ NW+ R ++++ +
Sbjct: 1249 PEGDALRYMIERTVNWQHRAQQLLSS 1274
Score = 38 (18.4 bits), Expect = 6.2e-112, Sum P(5) = 6.2e-112
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 739 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 797
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 798 LLRHL-RLVT--QDAEKC 812
Score = 38 (18.4 bits), Expect = 3.2e-109, Sum P(5) = 3.2e-109
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 745 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 788
Score = 38 (18.4 bits), Expect = 9.4e-17, Sum P(5) = 9.4e-17
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 172 RGHYERILNPYNLFLS-GDSLRCLQKPNLTSDTKDKEYKPHDIPQRQSVQPSETCPPARR 230
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 231 AKRMRAEAMNIKIEPEE 247
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 920 (328.9 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 183/439 (41%), Positives = 266/439 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
IC+ C G + +L CD C+ +H++CL PPL +PRG W C +C+ ++ ++FGF
Sbjct: 275 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGF 334
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+ Y+++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 335 EQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIH 394
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + +++ EY S WNLN +P L S+L ++ +I+G+ VPWL
Sbjct: 395 SKEFGSGFP--VSNSKQNLSPEE-KEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWL 451
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 452 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPD 511
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 512 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 571
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 572 LPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRK 631
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KG+ ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 632 ALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 686
Query: 659 CECKTRKLHLLYRHTLAEL 677
C+C + + +L YR+TL EL
Sbjct: 687 CKCSSSRQYLRYRYTLDEL 705
Score = 176 (67.0 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNE 74
Query: 91 LQ 92
L+
Sbjct: 75 LE 76
Score = 149 (57.5 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 82/383 (21%), Positives = 159/383 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 680 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 735
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGS-------- 947
+ L LESEA + + P +++L ++ + + E+C A+ + G
Sbjct: 736 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 793
Query: 948 MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDEL 1007
++L + +LL+++G M ++ +K + A + L + L
Sbjct: 794 LTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGL------L 847
Query: 1008 NCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMPLD--FIRQ---VTAEAVI 1062
+L+ G L ++V + ++ ++++A ++ +A I Q V +
Sbjct: 848 RSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIA 907
Query: 1063 LQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDE 1120
+K +L +L A RWEE+A L K E IIR +++I V LP++
Sbjct: 908 SSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQA 967
Query: 1121 VQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELE 1179
++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 968 LKEALTKAQAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLE 1018
Query: 1180 KVINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1019 LQVLTAHSWREKASKTFLKKNSC 1041
Score = 147 (56.8 bits), Expect = 8.1e-116, Sum P(6) = 8.1e-116
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I +++ E+ + E AL+ S L L R L + + E+ +
Sbjct: 809 LPCAM--HQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQ 866
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L Q++ A+ W D V++ ++ ++ I +L A +D ++ LL +
Sbjct: 867 LQQQVEQAQ-WLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTI 925
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 926 AERWEEKAHFCLEA-RQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDE 984
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 985 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Score = 84 (34.6 bits), Expect = 3.2e-14, Sum P(5) = 3.2e-14
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 1443 KPHGS---VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPY 1497
K H S + +C C ++ + L C C D YH+ CL P E+ R + CP
Sbjct: 263 KNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG---IWRCPK 319
Query: 1498 CQYFESESVSQ-FG 1510
C E + + FG
Sbjct: 320 CILAECKQPPEAFG 333
Score = 71 (30.1 bits), Expect = 6.5e-108, Sum P(6) = 6.5e-108
Identities = 43/194 (22%), Positives = 79/194 (40%)
Query: 722 MSQLVEQ--WLSCSLKVLQGLFSSDAYGTL-LREAEQFLWAGF----EMDAVRDMVNKLI 774
+ Q VEQ WL +V Q L S G+L + + + A +D R + +L+
Sbjct: 867 LQQQVEQAQWLD---EVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELL 923
Query: 775 E-GRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAE 833
RW E CL + P + E + + N +P + P L+
Sbjct: 924 TIAERWEEKAHFCLEARQKH---PPATLEAIIRETEN-------IPVHLPNIQALKEALT 973
Query: 834 EARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK 891
+A++ I +++ + + +LE L + LP+ + E +L ++ +A WR+ K
Sbjct: 974 KAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1033
Query: 892 CI--SNKCPAAIEI 903
N C +E+
Sbjct: 1034 TFLKKNSCYTLLEV 1047
Score = 63 (27.2 bits), Expect = 3.7e-115, Sum P(5) = 3.7e-115
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 1702 SLRARSML-YCICRKPYDEKAMIACYQCDEWYHIDCVK---LLSAPE 1744
SL A S C+C + ++ C C +W+H CV LL++P+
Sbjct: 1124 SLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1170
Score = 63 (27.2 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1696 LEKELKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
L K S + C +C + ++ ++ C CD+ YHI C+ L PEI
Sbjct: 261 LRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCL-LPPLPEI 310
Score = 61 (26.5 bits), Expect = 5.1e-108, Sum P(6) = 5.1e-108
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 1631 IQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFE-LIAE 1688
+Q L G + SP D R +L EL I +W + A L++ E +I E
Sbjct: 896 MQGLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAH-FCLEARQKHPPATLEAIIRE 954
Query: 1689 GENLPVYL 1696
EN+PV+L
Sbjct: 955 TENIPVHL 962
Score = 58 (25.5 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + S ++C+C + + + L C C
Sbjct: 1093 IVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPAG-VGVLQCDLC 1151
Query: 1472 KDCYHLQCL 1480
+D +H QC+
Sbjct: 1152 QDWFHGQCV 1160
Score = 58 (25.5 bits), Expect = 5.1e-108, Sum P(6) = 5.1e-108
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 1342 IGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDK 1401
IG++ +++ + +Q + + L S L+ L E G+ + PE ++ +V++
Sbjct: 816 IGDVKDVLEQVEAYQAEAREA--LATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQ 873
Query: 1402 VENWKQRCKEIVGTSVGDKNSLL---GLL 1427
+ W K+ + S + SL+ GLL
Sbjct: 874 AQ-WLDEVKQALAPSA-HRGSLVIMQGLL 900
Score = 53 (23.7 bits), Expect = 7.1e-09, Sum P(5) = 7.1e-09
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
+C Q +G+ G +L CD C +H C+S P
Sbjct: 1135 VCGQVPAGV-G--VLQCDLCQDWFHGQCVSVP 1163
Score = 52 (23.4 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 30/109 (27%), Positives = 54/109 (49%)
Query: 1619 LLEG-LTKPTIGQIQNYLKEGLLMNISPKDHYR-QKLMELNRIGSQWADVAKKVVLDSGA 1676
++EG L + T+ + N+ LL P D R + L+EL + Q + + A
Sbjct: 1346 MMEGDLLEVTLDE--NHSIWQLLQAGQPPDLDRIRTLLELEKFEHQGSRTRSR------A 1397
Query: 1677 LSLDKVFELIAEGENLPVYLEKELKSLRARS--MLYCICRKP--YDEKA 1721
L + + + +G N+ +++EL+S RARS ++ + R+ Y EKA
Sbjct: 1398 LERRRRRQKVDQGRNVENLVQQELQSKRARSSGIMSQVGREEEHYQEKA 1446
Score = 51 (23.0 bits), Expect = 7.8e-106, Sum P(6) = 7.8e-106
Identities = 46/212 (21%), Positives = 79/212 (37%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLMA----V 1279
+ S G LG + E +LQ W K+AL+ + SL ++ L+ +
Sbjct: 847 LRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKI 906
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A S + L L +W ++A + A K L E ++ + I P
Sbjct: 907 ASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATL---EAIIRETENIPVHLP 963
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 964 N-IQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1018
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1019 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1046
Score = 48 (22.0 bits), Expect = 5.0e-116, Sum P(6) = 5.0e-116
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 143 GGYDKVVKEKKWGEV 157
GGY+ + K+++W V
Sbjct: 82 GGYEAICKDRRWARV 96
Score = 48 (22.0 bits), Expect = 7.2e-107, Sum P(6) = 7.2e-107
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNC 1009
L+T+ LL L V +PE E L+ AI W R L + +++
Sbjct: 1201 LETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALAS-----------EDVTA 1249
Query: 1010 ILKEGASLRIQVDDLPLVE 1028
+L++ A LR Q+ P E
Sbjct: 1250 LLRQLAELRQQLQAKPRPE 1268
Score = 48 (22.0 bits), Expect = 1.2e-106, Sum P(6) = 1.2e-106
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 994 LDDLEGLVAVGRDLPVGLE-ELRQL 1017
Score = 48 (22.0 bits), Expect = 5.8e-104, Sum P(6) = 5.8e-104
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+D RK ++++ A+
Sbjct: 1214 LPVRLPEGEALQCLTERAIGWQDRARKALASEDVTAL 1250
Score = 45 (20.9 bits), Expect = 1.8e-114, Sum P(6) = 1.8e-114
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLL 1203
RLE++ L+ + L + L E L+ + WQ+ A L +D LL
Sbjct: 1200 RLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALL 1251
Score = 43 (20.2 bits), Expect = 5.8e-104, Sum P(6) = 5.8e-104
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 808 CVNELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASG 864
C ELLG +PG +I+ + +E ++Q + SA K S L +S
Sbjct: 1074 CDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLAPSLMASSP 1130
Query: 865 LPICI 869
IC+
Sbjct: 1131 TSICV 1135
Score = 37 (18.1 bits), Expect = 2.3e-18, Sum P(6) = 2.3e-18
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 306 GKRYTVESFRRVADRAKKKRF 326
G++ + E R + A+++RF
Sbjct: 735 GRKRSFEELRALESEARERRF 755
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 920 (328.9 bits), Expect = 1.1e-115, Sum P(3) = 1.1e-115
Identities = 183/439 (41%), Positives = 266/439 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
IC+ C G + +L CD C+ +H++CL PPL +PRG W C +C+ ++ ++FGF
Sbjct: 316 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGF 375
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+ Y+++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 376 EQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIH 435
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + +++ EY S WNLN +P L S+L ++ +I+G+ VPWL
Sbjct: 436 SKEFGSGFP--VSNSKQNLSPEE-KEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWL 492
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 493 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPD 552
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 553 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 612
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 613 LPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRK 672
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KG+ ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 673 ALLEKGVTEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 727
Query: 659 CECKTRKLHLLYRHTLAEL 677
C+C + + +L YR+TL EL
Sbjct: 728 CKCSSSRQYLRYRYTLDEL 746
Score = 217 (81.4 bits), Expect = 1.1e-115, Sum P(3) = 1.1e-115
Identities = 48/127 (37%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E + LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERKILDLYSLSKIVIEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 84 (34.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 1443 KPHGS---VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPY 1497
K H S + +C C ++ + L C C D YH+ CL P E+ R + CP
Sbjct: 304 KNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG---IWRCPK 360
Query: 1498 CQYFESESVSQ-FG 1510
C E + + FG
Sbjct: 361 CILAECKQPPEAFG 374
Score = 72 (30.4 bits), Expect = 1.1e-115, Sum P(3) = 1.1e-115
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 721 LSHINDLCKCSSSRQYLRYRYT-LDELPTML---HKLKIRAESFDTWANKVRVALEVEDG 776
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS-LKTVE 954
+ L LESEA + + P +++L ++ + + E+C A+ + G ++ + T +
Sbjct: 777 RKRSFEELRALESEARERRF--PNSELLQRLKNCLSEVEACIAQVLGLVSGQVARMDTPQ 834
Query: 955 LLLQEL 960
L L EL
Sbjct: 835 LTLTEL 840
Score = 63 (27.2 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1696 LEKELKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
L K S + C +C + ++ ++ C CD+ YHI C+ L PEI
Sbjct: 302 LRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCL-LPPLPEI 351
Score = 37 (18.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 306 GKRYTVESFRRVADRAKKKRF 326
G++ + E R + A+++RF
Sbjct: 776 GRKRSFEELRALESEARERRF 796
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 916 (327.5 bits), Expect = 2.2e-114, Sum P(4) = 2.2e-114
Identities = 188/449 (41%), Positives = 266/449 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 316 VCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKCLTQECCKPQEAFGF 375
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+++F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 376 EQAHRDYTLKAFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVGTIQEDVTVEYGADIA 435
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP + R + + +Y WNLNN+ + S+L V +I G+ +PWL
Sbjct: 436 SKEFGSGFP-IKGGRFKIAPHD--EKYLQCGWNLNNMAMMTPSVLTHVTADICGMTLPWL 492
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY PG A E VM+ P+LFD+QPD
Sbjct: 493 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMKKLAPELFDSQPD 552
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVP+Y Q G FVITFPRSYH+GFN G N AEAVNF DW
Sbjct: 553 LLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDW 612
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
+P G D Y+Q H+ V SH+E++C +A K+D LD ++ +++++ + +ER RE
Sbjct: 613 MPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADCLDVVLASAVQKDMQLMIKEERELRE 672
Query: 599 RLWRKGIIKSTPMGPRKCP--EY-VGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHW 655
++ RK MG +C +Y + +++ C+ CR YLSA+ C CRP VCL H
Sbjct: 673 KV-RK-------MGVAQCELFQYDLLADDERQCVKCRTTCYLSALTCPCRPGVQVCLYHT 724
Query: 656 EHLCECKTRKLHLLYRHTLAELYDLFLTV 684
LC C L YR TL +LY + V
Sbjct: 725 HDLCSCPISNYTLNYRFTLDDLYPMMNAV 753
Score = 203 (76.5 bits), Expect = 2.2e-114, Sum P(4) = 2.2e-114
Identities = 46/127 (36%), Positives = 73/127 (57%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EFKDP +I KIR AE+ GICK+ PP W+PPFA D+ F + Q +++
Sbjct: 16 PVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPPPDWQPPFACDVDRLHFTPRIQRLNE 75
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ F + ++F + G L K E + LDL +L GG+D V +
Sbjct: 76 LEAQTRV--KLNFLDQIAKFW-DLQGCTL-KIPHVERKILDLYQLNKLVADEGGFDLVCR 131
Query: 151 EKKWGEV 157
E++W ++
Sbjct: 132 ERRWTKI 138
Score = 113 (44.8 bits), Expect = 2.2e-114, Sum P(4) = 2.2e-114
Identities = 74/346 (21%), Positives = 146/346 (42%)
Query: 877 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ-A 933
QR W V + + K + V L E+ + PE D+L L+++ Q A
Sbjct: 755 QRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQSF--PENDLLRQLRLVTQDA 812
Query: 934 ESCRARCSEALRGSMSLK--------TVELLLQELGDFT---VNMP----ELELLKQYHS 978
E C + + L G + +L ++E+ F N+P + LLK+
Sbjct: 813 EKCSSVAQQLLNGKRQTRYRTGKAKSPNQLTVEEMRSFVRQLYNLPCSLTQAPLLKEL-L 871
Query: 979 DAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCRE 1038
++I + ++ L++ D + E+ +L+EG+ + + +LPL+ L++A
Sbjct: 872 NSIEDFQQHSEKLLSDEVSAD---AVSEIESLLEEGSQFDVFLPELPLLRERLEQARWLT 928
Query: 1039 KALKACDTK-----MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADI 1091
+A D + L+ +R++ V L E++ L +L + EE A +
Sbjct: 929 GVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENAQAL 988
Query: 1092 LIHKAQMCE-FEDI---IRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAP 1147
L KA+ E E + + + + LP+ +Q+ ++ AK WL+ +E P
Sbjct: 989 L--KARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGG--QVP 1044
Query: 1148 ASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS 1193
SL D+V ++ + + L+ +LE ++ + W+ A+
Sbjct: 1045 V------FSSLSDMVLRAHSIPVRLEPLDQLEVQVSEVQSWKETAA 1084
Score = 92 (37.4 bits), Expect = 1.6e-17, Sum P(4) = 1.6e-17
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
P V + +C+ C + E L+C C D YH CL P D + + CP C
Sbjct: 308 PVSMVDLYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGD-WRCPKC 361
Score = 87 (35.7 bits), Expect = 1.1e-112, Sum P(5) = 1.1e-112
Identities = 95/445 (21%), Positives = 176/445 (39%)
Query: 706 NRPTTLTKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYG---TLLREAEQFLWAGFE 762
N P +LT+ + S +E + S K+L S+DA +LL E QF E
Sbjct: 856 NLPCSLTQAPLLKELLNS--IEDFQQHSEKLLSDEVSADAVSEIESLLEEGSQFDVFLPE 913
Query: 763 MDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLP-GSDSEKVRLDCVNELLGFDPLPCN 821
+ +R+ +E RW G+ H+AE+ + P G E +R ++ +G P P
Sbjct: 914 LPLLRER----LEQARWLTGV----HQAEDPVANPCGLSLESMRR-LIDRGVGLTPHPSI 964
Query: 822 EPGHLILQNYAEEARSLIQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQR 878
E LQ + L + A L A S LE L S + G+P + L
Sbjct: 965 ERMMARLQELLTVSEELEENAQALLKARPPES-LETLCSMLTQVEGVPAYLPNCLLLQDT 1023
Query: 879 ISSAKVWRDSVRKC-ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCR 937
++ AK W + + P + + L + ++ ++++ P D L + + +S +
Sbjct: 1024 VNRAKEWLQEAESLQVGGQVPVFSSLSDMV-LRAHSIPVRLE-P-LDQLEVQVSEVQSWK 1080
Query: 938 ARCSEA-LRGSMSLKTVELLLQ--ELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI 994
++ L S +E+L E+G ++ ++ +K D + + V +
Sbjct: 1081 ETAAKTFLIKSSPFTLLEVLCPRWEMGS-SLKKKKMRKMK---GDCV---SSGKKKFVKL 1133
Query: 995 NGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK---KAHCREKALKACDTKMPLD 1051
+ D + + K+ AS + ++ L E+E +A K L D
Sbjct: 1134 DSMSDVERALSDS----KDSASAMFTLAEVRLKELESLCSLRASNESKLLPTADCASLKV 1189
Query: 1052 FIRQVTAEAVILQIE--REKLF-IDLSGVLAAAMRWEERAADILIH--KAQMCEFEDIIR 1106
+ Q A +LQ E R+ + + G + + E + + K + + ++
Sbjct: 1190 CVCQKPAMGAMLQCELCRDAFHSVCVRGP-SDPLDPEAWLCPLCLRSTKPPLDKIRSLLS 1248
Query: 1107 ASQDIFVVLPSLDEVQNEISTAKSW 1131
+ Q I V LP D ++ I + SW
Sbjct: 1249 SLQRIRVRLPEGDALRYMIERSVSW 1273
Score = 85 (35.0 bits), Expect = 4.6e-114, Sum P(5) = 4.6e-114
Identities = 63/265 (23%), Positives = 109/265 (41%)
Query: 1258 KKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSMLWNSLIHGVK-WLKRA--LEVISA 1312
+ A + L P SLE + S++ EG+ + +L ++ K WL+ A L+V
Sbjct: 983 ENAQALLKARPPESLETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESLQVGGQ 1042
Query: 1313 PCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFNLK--- 1366
F LSD+ VL S PV + +L + + + W+E + F +K
Sbjct: 1043 VPVFS--SLSDM--VLRA-----HSIPVRLEPLDQLEVQVSEVQSWKETAAKTFLIKSSP 1093
Query: 1367 -------CAQQSWSLMLQLKELGEAAAFDCPEL-EKVLSKVDKVENWKQRCKEIVGTSVG 1418
C + L+ K++ + DC +K K+D + + +R S
Sbjct: 1094 FTLLEVLCPRWEMGSSLKKKKMRKMKG-DCVSSGKKKFVKLDSMSD-VERALSDSKDSAS 1151
Query: 1419 DKNSLLGLLQKIKQSVHRSLYIYNK----PHGS-VSMTLCMCCESDSKELEFLICSACKD 1473
+L + K +S+ SL N+ P S+ +C+C + + L C C+D
Sbjct: 1152 AMFTLAEVRLKELESLC-SLRASNESKLLPTADCASLKVCVCQKPAMGAM--LQCELCRD 1208
Query: 1474 CYHLQCLRPTEVDRNHAEAYICPYC 1498
+H C+R D EA++CP C
Sbjct: 1209 AFHSVCVRGPS-DPLDPEAWLCPLC 1232
Score = 80 (33.2 bits), Expect = 3.3e-16, Sum P(4) = 3.3e-16
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFVPG 306
++C C+ G ML C+ C +H C+ P + W C CL S K +
Sbjct: 1188 KVCV-CQKPAMG-AMLQCELCRDAFHSVCVRGPSDPLDPEAWLCPLCLRSTKPPLDKI-- 1243
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKF-WE 342
R + S +R+ + R G A R +E+ W+
Sbjct: 1244 -RSLLSSLQRI-----RVRLPEGDALRYMIERSVSWQ 1274
Score = 79 (32.9 bits), Expect = 2.2e-114, Sum P(4) = 2.2e-114
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1698 KELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP---EIYICAAC 1751
K L + S+ C+C+KP AM+ C C + +H CV+ S P E ++C C
Sbjct: 1177 KLLPTADCASLKVCVCQKPA-MGAMLQCELCRDAFHSVCVRGPSDPLDPEAWLCPLC 1232
Score = 79 (32.9 bits), Expect = 2.2e-114, Sum P(5) = 2.2e-114
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 1713 CRKPYDEKA-MIACYQCDEWYHIDCVKL---LSAPEIYICAAC 1751
C +P E+ + C C+ W+H+ CV + L+A E Y+C +C
Sbjct: 1471 CLQPEGEEVDWVQCDCCNRWFHMICVGVSAELAAEEDYMCVSC 1513
Score = 74 (31.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 1709 LY-C-ICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAEESSTPQN 1763
LY C +C K DE ++ C CD+ YH C+ L P+ + C C Q E PQ
Sbjct: 314 LYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKCLTQ--ECCKPQE 371
Query: 1764 VDG 1766
G
Sbjct: 372 AFG 374
Score = 72 (30.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 240 DKEDELDQIC--EQCKSGLHGEV-MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296
D E+++ +C E C EV + CD CN+ +H+ C+ + ++ C+ C S
Sbjct: 1458 DSEEDMT-LCPAESCLQPEGEEVDWVQCDCCNRWFHMICVGVSAELAAEEDYMCVSCSTS 1516
Query: 297 DKD 299
D
Sbjct: 1517 HMD 1519
Score = 71 (30.1 bits), Expect = 1.5e-113, Sum P(5) = 1.5e-113
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 1450 MTLC---MCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
MTLC C + + +E++++ C C +H+ C+ + E Y+C C
Sbjct: 1463 MTLCPAESCLQPEGEEVDWVQCDCCNRWFHMICVG-VSAELAAEEDYMCVSC 1513
Score = 67 (28.6 bits), Expect = 4.6e-114, Sum P(5) = 4.6e-114
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 1198
L +E ++ V Q L SL + L++++N+ E +Q H+ LL D
Sbjct: 842 LTVEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSD 887
Score = 53 (23.7 bits), Expect = 1.3e-112, Sum P(5) = 1.3e-112
Identities = 16/82 (19%), Positives = 38/82 (46%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ E+ + LP + ++ L + ++S + ++ K +S++ A ++ LE
Sbjct: 844 VEEMRSFVRQLYNLPCSLTQAPLLKELLNSIEDFQQHSEKLLSDEVSADAVSEIESLLE- 902
Query: 912 EALDLKIDVPETDMLLKMIGQA 933
E + +PE +L + + QA
Sbjct: 903 EGSQFDVFLPELPLLRERLEQA 924
Score = 52 (23.4 bits), Expect = 1.1e-112, Sum P(5) = 1.1e-112
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSN 1214
L+ ++ L+S + +++ L E L +I WQ ++ D+ L G G S
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI-DSYGLSSTSQDGRGASP 1298
Query: 1215 S 1215
S
Sbjct: 1299 S 1299
Score = 50 (22.7 bits), Expect = 6.0e-109, Sum P(5) = 6.0e-109
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 940 CSEALRGSMS-LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 991
C LR + L + LL L V +PE + L+ ++ W R+ +++
Sbjct: 1229 CPLCLRSTKPPLDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 46 (21.3 bits), Expect = 2.4e-107, Sum P(4) = 2.4e-107
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 903 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEAL 944
+D + L S +++ +PE D L MI ++ S + R E +
Sbjct: 1240 LDKIRSLLSSLQRIRVRLPEGDALRYMIERSVSWQRRVREVI 1281
Score = 45 (20.9 bits), Expect = 6.9e-110, Sum P(5) = 6.9e-110
Identities = 15/89 (16%), Positives = 39/89 (43%)
Query: 1612 WRVRVSKLLEGLTKP---TIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVA 1667
W V + + + P ++ ++ + G+ + P + +L EL + + + A
Sbjct: 926 WLTGVHQAEDPVANPCGLSLESMRRLIDRGVGLTPHPSIERMMARLQELLTVSEELEENA 985
Query: 1668 KKVVLDSGALSLDKVFELIAEGENLPVYL 1696
+ ++ SL+ + ++ + E +P YL
Sbjct: 986 QALLKARPPESLETLCSMLTQVEGVPAYL 1014
Score = 45 (20.9 bits), Expect = 1.0e-108, Sum P(6) = 1.0e-108
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 1195
LE+L +++Q + + L L+ +N + W A SL
Sbjct: 997 LETLCSMLTQVEGVPAYLPNCLLLQDTVNRAKEWLQEAESL 1037
Score = 44 (20.5 bits), Expect = 3.8e-107, Sum P(4) = 3.8e-107
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 906 LYKLESEALDLKIDVPETDMLLKMI 930
L +L E L L++ +PET L +++
Sbjct: 1350 LEELMVEGLVLQVSLPETQQLYRLL 1374
Score = 43 (20.2 bits), Expect = 3.2e-108, Sum P(5) = 3.2e-108
Identities = 27/142 (19%), Positives = 61/142 (42%)
Query: 1046 TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDII 1105
TK PLD IR + + +++ + L ++ ++ W+ R +++ +D
Sbjct: 1236 TKPPLDKIRSLLSSLQRIRVRLPEGDA-LRYMIERSVSWQRRVREVIDSYGLSSTSQDGR 1294
Query: 1106 RAS--QDIFVVLPSLDEVQ--NEISTAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKD 1160
AS Q+++ ++Q S + W + + + F L L L++
Sbjct: 1295 GASPSQNLYRSTGHSRKLQLCGSPSRCQDWAVSGQE--QTVFYTEQRCIPLQGLSPELEE 1352
Query: 1161 LVSQSKFLKISLKEQTELEKVI 1182
L+ + L++SL E +L +++
Sbjct: 1353 LMVEGLVLQVSLPETQQLYRLL 1374
Score = 42 (19.8 bits), Expect = 2.2e-114, Sum P(5) = 2.2e-114
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
PE + + +++ +W++R +E++ + S G Q+++RS
Sbjct: 1258 PEGDALRYMIERSVSWQRRVREVIDSYGLSSTSQDGRGASPSQNLYRS 1305
Score = 40 (19.1 bits), Expect = 4.6e-107, Sum P(5) = 4.6e-107
Identities = 8/48 (16%), Positives = 22/48 (45%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
P + V + + ++W R E++ + K ++ +++S +S
Sbjct: 748 PMMNAVRQRAEYYDDWASRVTEVMEAKLDKKRNVTVFRTLLEESNEQS 795
Score = 38 (18.4 bits), Expect = 8.4e-13, Sum P(4) = 8.4e-13
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 587 LRVYTKE-RMWRERLWRKGIIKSTPMGPRK--CPEY 619
L V E + W+E + +IKS+P + CP +
Sbjct: 1069 LEVQVSEVQSWKETAAKTFLIKSSPFTLLEVLCPRW 1104
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 971 (346.9 bits), Expect = 2.7e-113, Sum P(3) = 2.7e-113
Identities = 266/840 (31%), Positives = 412/840 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D++ EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDNKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 798 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLAELRA 855
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L + LG +
Sbjct: 856 FLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPGLLQSLLERGQQLGVEV 915
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 916 PEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKA 969
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 970 RAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALA 1027
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+A + A E G L +E L+ D V + EL L+ A W + +
Sbjct: 1028 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 1049
+ +K+ + E+ C + S I+ E+ L K+ L A D + P
Sbjct: 1088 TFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYKSDTELLGLSAQDLRDP 1143
Score = 217 (81.4 bits), Expect = 2.7e-113, Sum P(3) = 2.7e-113
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 147 (56.8 bits), Expect = 2.6e-23, Sum P(3) = 2.6e-23
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 1007
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 1008 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 1058
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 1059 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 1116
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 1117 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 1175
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 1176 TELEKVINNCERWQNHAS-SLLQDARC 1201
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 68 (29.0 bits), Expect = 2.3e-18, Sum P(4) = 2.3e-18
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D R +L EL I +W + A
Sbjct: 930 WLDEVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKARAELQELLTIAERWEEKAH- 988
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 1029
Score = 62 (26.9 bits), Expect = 2.7e-113, Sum P(3) = 2.7e-113
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 3.5e-113, Sum P(3) = 3.5e-113
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1472 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 61 (26.5 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 52 (23.4 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1189 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1224
Score = 51 (23.0 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 40/187 (21%), Positives = 76/187 (40%)
Query: 1256 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 1309
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 773 WANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 832
Query: 1310 ISA----PCKFKRCKLSDVEEVLAGCKGINFSFPVV---IGELTSAIQKHKLWQEQVHQF 1362
+S P + +++ + E+ A +N + P IG++ +++ + +Q + +
Sbjct: 833 VSGQEAGPHRVAGLQMT-LAELRAFLDQMN-NLPCAMHQIGDVKGILEQVEGYQAEAREA 890
Query: 1363 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDK 1420
L S L+ L E G+ + PE +++ +V++ W K + + G
Sbjct: 891 --LASLPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPAARRGTL 947
Query: 1421 NSLLGLL 1427
+ GLL
Sbjct: 948 AVMRGLL 954
Score = 50 (22.7 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 2.4e-16, Sum P(4) = 2.4e-16
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 47 (21.6 bits), Expect = 4.6e-13, Sum P(3) = 4.6e-13
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLM----AV 1279
++S G LG + E +LQ W K+ L+ + +L + L+ +V
Sbjct: 901 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAGASV 960
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A + + L L +W ++A + A K L E ++ + I P
Sbjct: 961 APSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATL---EAIIHEAENIPVHLP 1017
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1018 N-IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1072
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1073 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1100
Score = 46 (21.3 bits), Expect = 1.3e-111, Sum P(3) = 1.3e-111
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
Score = 40 (19.1 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 811 ELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
ELLG +PG +I+ + +E ++Q + SA K S L + +S +
Sbjct: 1131 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLASSATASSATSV 1187
Query: 868 CI 869
C+
Sbjct: 1188 CV 1189
Score = 38 (18.4 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1304
Score = 37 (18.1 bits), Expect = 4.8e-14, Sum P(4) = 4.8e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 4.8e-14, Sum P(4) = 4.8e-14
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 971 (346.9 bits), Expect = 4.4e-113, Sum P(3) = 4.4e-113
Identities = 266/840 (31%), Positives = 412/840 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D++ EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDNKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 798 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLAELRA 855
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L + LG +
Sbjct: 856 FLDQMNNLPCAMHQIGDVKGILEQVEGYQAEAREALASLPSSPGLLQSLLERGQQLGVEV 915
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 916 PEAQQ-----LQRQVEQARWL-DEVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKA 969
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 970 RAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALA 1027
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+A + A E G L +E L+ D V + EL L+ A W + +
Sbjct: 1028 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 1049
+ +K+ + E+ C + S I+ E+ L K+ L A D + P
Sbjct: 1088 TFL----KKNSCYTLLEVLCPCADAGSDSIKRSRWMEKELGLYKSDTELLGLSAQDLRDP 1143
Score = 217 (81.4 bits), Expect = 4.4e-113, Sum P(3) = 4.4e-113
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 147 (56.8 bits), Expect = 2.8e-23, Sum P(3) = 2.8e-23
Identities = 86/387 (22%), Positives = 163/387 (42%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNING-RKDQHNVIDEL--- 1007
+++ L EL F M L A+ I + IL + G + + + L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPC-------AMHQIGDVKGILEQVEGYQAEAREALASLPSS 897
Query: 1008 ----NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTA 1058
+L+ G L ++V + ++ ++++A + + L + L +R V
Sbjct: 898 PGLLQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAG 957
Query: 1059 EAVILQIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLP 1116
+V +K +L +L A RWEE+A L K E II +++I V LP
Sbjct: 958 ASVAPSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLP 1017
Query: 1117 SLDEVQNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ 1175
++ ++ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEEL 1068
Query: 1176 TELEKVINNCERWQNHAS-SLLQDARC 1201
+LE + W+ AS + L+ C
Sbjct: 1069 RQLELQVLTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 68 (29.0 bits), Expect = 2.5e-18, Sum P(4) = 2.5e-18
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D R +L EL I +W + A
Sbjct: 930 WLDEVKRTLAPAARRGTLAVMRGLLVAGASVAPSPAVDKARAELQELLTIAERWEEKAH- 988
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 1029
Score = 62 (26.9 bits), Expect = 4.4e-113, Sum P(3) = 4.4e-113
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 5.7e-113, Sum P(3) = 5.7e-113
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAG-VGALQCDLC 1205
Query: 1472 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 61 (26.5 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 52 (23.4 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1189 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1224
Score = 51 (23.0 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 40/187 (21%), Positives = 76/187 (40%)
Query: 1256 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 1309
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 773 WANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 832
Query: 1310 ISA----PCKFKRCKLSDVEEVLAGCKGINFSFPVV---IGELTSAIQKHKLWQEQVHQF 1362
+S P + +++ + E+ A +N + P IG++ +++ + +Q + +
Sbjct: 833 VSGQEAGPHRVAGLQMT-LAELRAFLDQMN-NLPCAMHQIGDVKGILEQVEGYQAEAREA 890
Query: 1363 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDK 1420
L S L+ L E G+ + PE +++ +V++ W K + + G
Sbjct: 891 --LASLPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPAARRGTL 947
Query: 1421 NSLLGLL 1427
+ GLL
Sbjct: 948 AVMRGLL 954
Score = 50 (22.7 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 2.6e-16, Sum P(4) = 2.6e-16
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 47 (21.6 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 44/212 (20%), Positives = 79/212 (37%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWC---KKALSFLSVSPSLEDVESLM----AV 1279
++S G LG + E +LQ W K+ L+ + +L + L+ +V
Sbjct: 901 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPAARRGTLAVMRGLLVAGASV 960
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A + + L L +W ++A + A K L E ++ + I P
Sbjct: 961 APSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATL---EAIIHEAENIPVHLP 1017
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1018 N-IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1072
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1073 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1100
Score = 46 (21.3 bits), Expect = 2.1e-111, Sum P(3) = 2.1e-111
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 811 ELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
ELLG +PG +I+ + +E ++Q + SA K S L + +S +
Sbjct: 1131 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLASSATASSATSV 1187
Query: 868 CI 869
C+
Sbjct: 1188 CV 1189
Score = 38 (18.4 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1304
Score = 37 (18.1 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 964 (344.4 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 255/774 (32%), Positives = 386/774 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 325 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 384
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 385 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 444
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 445 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 501
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 502 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 561
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 562 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 621
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 622 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 681
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 682 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 736
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 737 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 796
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L++Q +C L + S A G + +EA AG +M A
Sbjct: 797 ESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLTELRA 854
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L LG +
Sbjct: 855 FLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEV 914
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 915 PEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKA 968
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 969 QAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAENIPVHLPNIQALKEALA 1026
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+A + A E G L +E L+ D V + EL L+ A W
Sbjct: 1027 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1080
Score = 217 (81.4 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 155 (59.6 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 862 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 919
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 920 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 978
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 979 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1037
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1038 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1086
Score = 147 (56.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 730 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 785
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 786 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 843
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 1008
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 844 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 901
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 1063
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 902 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 961
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 962 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1021
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1022 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1072
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1073 QVLTAHSWREKASKTFLKKNSC 1094
Score = 80 (33.2 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 325 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 381
Query: 1509 FG 1510
FG
Sbjct: 382 FG 383
Score = 68 (29.0 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 30/143 (20%), Positives = 57/143 (39%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + + N +P + P
Sbjct: 968 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAIIREAEN-------IPVHLPN 1017
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 1018 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1077
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1078 HSWREKASKTFLKKNSCYTLLEV 1100
Score = 65 (27.9 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1187 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1222
Score = 61 (26.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 121/591 (20%), Positives = 229/591 (38%)
Query: 979 DAIFWIARLNDILVNINGRK--DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
D + ++ +ND+ + R+ +DEL +L + L+++ + + K
Sbjct: 725 DGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHK---LKVRAESF---DTWANKVRV 778
Query: 1037 REKALKACD-TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI-- 1093
AL+ D K L+ +R + +EA + +L L L+ A RA ++
Sbjct: 779 ---ALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQ 835
Query: 1094 ----HKA---QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA---F 1143
H+ QM E +RA D LP ++I K L+ E + A A
Sbjct: 836 EAGPHRVAGLQMTLTE--LRAFLDQMNNLPC---AMHQIGDVKGVLEQVEAYQAEAREAL 890
Query: 1144 AVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARCL 1202
A P+S LL+ L+ + + L + + E +L++ + RW + +L AR
Sbjct: 891 ASLPSSPGLLQ-----SLLERGRQLGVEVPEAQQLQRQVEQA-RWLDEVKRTLAPSAR-- 942
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLH-WCKKAL 1261
++ + L+ + S A S D + +ELQ + W +KA
Sbjct: 943 -----------RGTLAVMRGLLVAGASVAP---SPAVDKAQ-AELQELLTIAERWEEKAH 987
Query: 1262 SFLSVSPSLED--VESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISA---PCK 1315
L +E+++ AE + + L +L W+ E+ + PC
Sbjct: 988 LCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC- 1046
Query: 1316 FKRCKLSDVEEVLAGCKGINFSFPVVIGELTS----AIQKHKLWQEQVHQFFNLKCAQQS 1371
L D+E ++A + PV + EL + H W+E+ + F LK
Sbjct: 1047 -----LDDLEGLVA----VGRDLPVGLEELRQLELQVLTAHS-WREKASKTF-LK-KNSC 1094
Query: 1372 WSLMLQLKELGEAAAFDCPE---LEKVLS--KVD------KVENWKQRCKEIVGTSVGDK 1420
++L+ L +A + +EK L K D ++ + IV G++
Sbjct: 1095 YTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQ 1154
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
G+LQ + + + + + S + ++C+C + + L C C+D +H +C+
Sbjct: 1155 KEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGA-GALQCDLCQDWFHGRCV 1213
Query: 1481 R-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1214 SVPRLLSSPRPNPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1261
Score = 61 (26.5 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 328 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 380
Score = 59 (25.8 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 17/41 (41%), Positives = 19/41 (46%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPRGN 287
IC C L G L CD C +H C+S P L PR N
Sbjct: 1186 ICV-CGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSPRPN 1225
Score = 50 (22.7 bits), Expect = 5.5e-111, Sum P(3) = 5.5e-111
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1254 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1297
Score = 49 (22.3 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 27/93 (29%), Positives = 38/93 (40%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQW-ADVAKKV 1670
W + LE K ++ ++E NI Q L E W ADV ++
Sbjct: 982 WEEKAHLCLEARQKHPPATLEAIIREA--ENIPVHLPNIQALKEALAKARAWIADV-DEI 1038
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1039 QNGDHYPCLDDLEGLVAVGRDLPVGLE-ELRQL 1070
Score = 46 (21.3 bits), Expect = 1.5e-110, Sum P(3) = 1.5e-110
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1253 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1306
Score = 38 (18.4 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1267 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1303
Score = 37 (18.1 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 919 DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPE 969
D+P+ LL+ S E G L+ + LL +L + +PE
Sbjct: 1342 DMPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELLSSLLPQLTGPVLELPE 1392
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 304 CTKMTMRLRRNHSNAQFIESYVCRMC 329
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 964 (344.4 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 255/774 (32%), Positives = 386/774 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L++Q +C L + S A G + +EA AG +M A
Sbjct: 798 ESEARERRFPNSELLQQLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLTELRA 855
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L LG +
Sbjct: 856 FLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEV 915
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 916 PEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKA 969
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 970 QAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIREAENIPVHLPNIQALKEALA 1027
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+A + A E G L +E L+ D V + EL L+ A W
Sbjct: 1028 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1081
Score = 217 (81.4 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 155 (59.6 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 60/234 (25%), Positives = 116/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E +++E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 147 (56.8 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 84/382 (21%), Positives = 161/382 (42%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 1008
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 1063
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
+K +L +L A RWEE+A L K E IIR +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL 1022
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 68 (29.0 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 30/143 (20%), Positives = 57/143 (39%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + + N +P + P
Sbjct: 969 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAIIREAEN-------IPVHLPN 1018
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 1019 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1078
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1079 HSWREKASKTFLKKNSCYTLLEV 1101
Score = 65 (27.9 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 121/591 (20%), Positives = 229/591 (38%)
Query: 979 DAIFWIARLNDILVNINGRK--DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
D + ++ +ND+ + R+ +DEL +L + L+++ + + K
Sbjct: 726 DGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHK---LKVRAESF---DTWANKVRV 779
Query: 1037 REKALKACD-TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI-- 1093
AL+ D K L+ +R + +EA + +L L L+ A RA ++
Sbjct: 780 ---ALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQ 836
Query: 1094 ----HKA---QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA---F 1143
H+ QM E +RA D LP ++I K L+ E + A A
Sbjct: 837 EAGPHRVAGLQMTLTE--LRAFLDQMNNLPC---AMHQIGDVKGVLEQVEAYQAEAREAL 891
Query: 1144 AVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARCL 1202
A P+S LL+ L+ + + L + + E +L++ + RW + +L AR
Sbjct: 892 ASLPSSPGLLQ-----SLLERGRQLGVEVPEAQQLQRQVEQA-RWLDEVKRTLAPSAR-- 943
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLH-WCKKAL 1261
++ + L+ + S A S D + +ELQ + W +KA
Sbjct: 944 -----------RGTLAVMRGLLVAGASVAP---SPAVDKAQ-AELQELLTIAERWEEKAH 988
Query: 1262 SFLSVSPSLED--VESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISA---PCK 1315
L +E+++ AE + + L +L W+ E+ + PC
Sbjct: 989 LCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC- 1047
Query: 1316 FKRCKLSDVEEVLAGCKGINFSFPVVIGELTS----AIQKHKLWQEQVHQFFNLKCAQQS 1371
L D+E ++A + PV + EL + H W+E+ + F LK
Sbjct: 1048 -----LDDLEGLVA----VGRDLPVGLEELRQLELQVLTAHS-WREKASKTF-LK-KNSC 1095
Query: 1372 WSLMLQLKELGEAAAFDCPE---LEKVLS--KVD------KVENWKQRCKEIVGTSVGDK 1420
++L+ L +A + +EK L K D ++ + IV G++
Sbjct: 1096 YTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQ 1155
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
G+LQ + + + + + S + ++C+C + + L C C+D +H +C+
Sbjct: 1156 KEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGA-GALQCDLCQDWFHGRCV 1214
Query: 1481 R-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1215 SVPRLLSSPRPNPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 61 (26.5 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 59 (25.8 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 17/41 (41%), Positives = 19/41 (46%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPRGN 287
IC C L G L CD C +H C+S P L PR N
Sbjct: 1187 ICV-CGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSPRPN 1226
Score = 50 (22.7 bits), Expect = 5.6e-111, Sum P(3) = 5.6e-111
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 49 (22.3 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 27/93 (29%), Positives = 38/93 (40%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQW-ADVAKKV 1670
W + LE K ++ ++E NI Q L E W ADV ++
Sbjct: 983 WEEKAHLCLEARQKHPPATLEAIIREA--ENIPVHLPNIQALKEALAKARAWIADV-DEI 1039
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1040 QNGDHYPCLDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 1.5e-110, Sum P(3) = 1.5e-110
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
Score = 38 (18.4 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1304
Score = 37 (18.1 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 919 DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPE 969
D+P+ LL+ S E G L+ + LL +L + +PE
Sbjct: 1343 DMPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELLSSLLPQLTGPVLELPE 1393
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 2.1e-12, Sum P(4) = 2.1e-12
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 961 (343.3 bits), Expect = 2.4e-112, Sum P(4) = 2.4e-112
Identities = 254/771 (32%), Positives = 386/771 (50%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 798 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRMAGLQMTLAELRA 855
Query: 766 VRDMVNKLIEGRRWAEGIRDCL-----HKAENWSSLPGSDSEKVRLDCVNELLGFDPLPC 820
D +N L ++ L ++AE +L S L + E G L
Sbjct: 856 FLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLER-G-QQLGV 913
Query: 821 NEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESEK-- 874
P LQ E+A+ L E+ L+ ++ L LL + AS P V+ +
Sbjct: 914 EVPEAQQLQRQVEQAQWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAE 972
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAE 934
L + ++ A+ W + C+ + L + EA ++ + +P L + + +A
Sbjct: 973 LQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALAKAR 1030
Query: 935 SCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+ A E G L +E L+ D V + EL L+ A W
Sbjct: 1031 AWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1081
Score = 217 (81.4 bits), Expect = 2.4e-112, Sum P(4) = 2.4e-112
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 151 (58.2 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSLLERGQQLGVEVPEAQQ 920
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAQ-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 142 (55.0 bits), Expect = 9.3e-23, Sum P(3) = 9.3e-23
Identities = 82/380 (21%), Positives = 157/380 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRMA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNI-NGRKDQHNVIDELNCI 1010
+++ L EL F M L D + ++ + L +
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGLLQSL 904
Query: 1011 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 1065
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQAQWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSP 964
Query: 1066 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 1123
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKE 1024
Query: 1124 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 1182
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 1183 NNCERWQNHAS-SLLQDARC 1201
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 6.4e-18, Sum P(4) = 6.4e-18
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 68 (29.0 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + ++E + +P + P
Sbjct: 969 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAI----IHEA---ENIPVHLPN 1018
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 1019 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1078
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1079 HSWREKASKTFLKKNSCYTLLEV 1101
Score = 64 (27.6 bits), Expect = 6.4e-18, Sum P(4) = 6.4e-18
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D + +L EL I +W + A
Sbjct: 930 WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAH- 988
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 1029
Score = 62 (26.9 bits), Expect = 2.4e-112, Sum P(4) = 2.4e-112
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 8.2e-112, Sum P(3) = 8.2e-112
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSTKPSPLASSTTASSATSICVCGQVPAG-VGALQCDLC 1205
Query: 1472 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
+D +H +C+ P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVSVPRLLSSPRPSPTPSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 61 (26.5 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 57 (25.1 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 41/187 (21%), Positives = 77/187 (41%)
Query: 1256 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 1309
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 773 WANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 832
Query: 1310 ISA----PCKFKRCKLSDVEEVLAGCKGINFSFPVV---IGELTSAIQKHKLWQEQVHQF 1362
+S P + +++ + E+ A +N + P IG++ +++ + +Q + +
Sbjct: 833 VSGQEAGPHRMAGLQMT-LAELRAFLDQMN-NLPCAMHQIGDVKGILEQVEAYQAEACEA 890
Query: 1363 FNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDK 1420
L S L+ L E G+ + PE +++ +V++ + W K + S G
Sbjct: 891 --LASLPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAQ-WLDEVKRTLAPSARRGTL 947
Query: 1421 NSLLGLL 1427
+ GLL
Sbjct: 948 AVMRGLL 954
Score = 52 (23.4 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1189 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1224
Score = 50 (22.7 bits), Expect = 1.2e-110, Sum P(3) = 1.2e-110
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 2.4e-112, Sum P(4) = 2.4e-112
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 47 (21.6 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 44/212 (20%), Positives = 78/212 (36%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSP---SLEDVESLM----AV 1279
++S G LG + E +LQ W + L+ S +L + L+ +V
Sbjct: 901 LQSLLERGQQLGVEVPEAQQLQRQVEQAQWLDEVKRTLAPSARRGTLAVMRGLLVAGASV 960
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A + + L L +W ++A + A K L E ++ + I P
Sbjct: 961 APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATL---EAIIHEAENIPVHLP 1017
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1018 N-IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1072
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1073 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1100
Score = 46 (21.3 bits), Expect = 3.1e-110, Sum P(3) = 3.1e-110
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
Score = 39 (18.8 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 811 ELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICI 869
ELLG +PG +I+ E + + + +K S L + +S IC+
Sbjct: 1131 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSTKPSPLASSTTASSATSICV 1189
Score = 38 (18.4 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1304
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 960 (343.0 bits), Expect = 3.3e-112, Sum P(4) = 3.3e-112
Identities = 254/774 (32%), Positives = 386/774 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 798 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLAELRA 855
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L LG +
Sbjct: 856 FLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEV 915
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 916 PEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKA 969
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 970 QAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALA 1027
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+A + A E G L +E L+ D V + EL L+ A W
Sbjct: 1028 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1081
Score = 217 (81.4 bits), Expect = 3.3e-112, Sum P(4) = 3.3e-112
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 154 (59.3 bits), Expect = 5.4e-24, Sum P(3) = 5.4e-24
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 863 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 920
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 921 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 979
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 980 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 1038
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 1039 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1087
Score = 143 (55.4 bits), Expect = 7.4e-23, Sum P(3) = 7.4e-23
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 1008
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 845 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 902
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 1063
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 903 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 962
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 963 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 1022
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 1023 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1073
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1074 QVLTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 6.5e-18, Sum P(4) = 6.5e-18
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 68 (29.0 bits), Expect = 3.7e-15, Sum P(3) = 3.7e-15
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + ++E + +P + P
Sbjct: 969 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAI----IHEA---ENIPVHLPN 1018
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 1019 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1078
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1079 HSWREKASKTFLKKNSCYTLLEV 1101
Score = 64 (27.6 bits), Expect = 6.5e-18, Sum P(4) = 6.5e-18
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D + +L EL I +W + A
Sbjct: 930 WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAH- 988
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 1029
Score = 62 (26.9 bits), Expect = 3.3e-112, Sum P(4) = 3.3e-112
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1223
Score = 61 (26.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 121/591 (20%), Positives = 230/591 (38%)
Query: 979 DAIFWIARLNDILVNINGRK--DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
D + ++ +ND+ + R+ +DEL +L + L+++ + + K
Sbjct: 726 DGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHK---LKVRAESF---DTWANKVRV 779
Query: 1037 REKALKACD-TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI-- 1093
AL+ D K L+ +R + +EA + +L L L+ A RA ++
Sbjct: 780 ---ALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQ 836
Query: 1094 ----HKA---QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA---F 1143
H+ QM E +RA D LP ++I K L+ E + A A
Sbjct: 837 EAGPHRVAGLQMTLAE--LRAFLDQMNNLPC---AMHQIGDVKGILEQVEAYQAEAREAL 891
Query: 1144 AVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARCL 1202
A P+S LL+ L+ + + L + + E +L++ + RW + +L AR
Sbjct: 892 ASLPSSPGLLQ-----SLLERGRQLGVEVPEAQQLQRQVEQA-RWLDEVKRTLAPSAR-- 943
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLH-WCKKAL 1261
++ + L+ + S A S D + +ELQ + W +KA
Sbjct: 944 -----------RGTLAVMRGLLVAGASVAP---SPAVDKAQ-AELQELLTIAERWEEKAH 988
Query: 1262 SFLSVSPSLED--VESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISA---PCK 1315
L +E+++ AE + + L +L W+ E+ + PC
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC- 1047
Query: 1316 FKRCKLSDVEEVLAGCKGINFSFPVVIGELTS----AIQKHKLWQEQVHQFFNLKCAQQS 1371
L D+E ++A + PV + EL + H W+E+ + F LK
Sbjct: 1048 -----LDDLEGLVA----VGRDLPVGLEELRQLELQVLTAHS-WREKASKTF-LK-KNSC 1095
Query: 1372 WSLMLQLKELGEAAAFDCPE---LEKVLS--KVD------KVENWKQRCKEIVGTSVGDK 1420
++L+ L +A + +EK L K D ++ + IV G++
Sbjct: 1096 YTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQ 1155
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
G+LQ + + + + + S + ++C+C + + + L C C+D +H +C+
Sbjct: 1156 KEKEGILQLRRTNSAKPSPLASPNTSSSATSICVCGQVPAG-VGALQCDLCQDWFHGRCV 1214
Query: 1481 R-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1215 SVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 61 (26.5 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 52 (23.4 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1189 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1224
Score = 50 (22.7 bits), Expect = 1.6e-110, Sum P(3) = 1.6e-110
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1255 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1298
Score = 48 (22.0 bits), Expect = 3.3e-112, Sum P(4) = 3.3e-112
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 46 (21.3 bits), Expect = 4.2e-110, Sum P(3) = 4.2e-110
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1307
Score = 40 (19.1 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 811 ELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
ELLG +PG +I+ + +E ++Q + SA K S L + +S I
Sbjct: 1131 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLASPNTSSSATSI 1187
Query: 868 CI 869
C+
Sbjct: 1188 CV 1189
Score = 38 (18.4 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1304
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 1.4e-13, Sum P(4) = 1.4e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 856 (306.4 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 185/455 (40%), Positives = 249/455 (54%)
Query: 240 DKEDELDQI-CEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296
D ED +DQ+ C C G +++LLCD CN G H YC P L VP G W C +C+ S
Sbjct: 312 DDEDPMDQVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCIES 371
Query: 297 DKDSFGFVPG-----KRYTVESFRRVADRAKKKRFRSGSASRVQ---MEKKFWEIVEGAA 348
+ G G Y + SF A++ K F S+V +E+ FW+ V
Sbjct: 372 EDAKIGLDWGFYDADTEYNLNSFTEFANKWKCDYFGVKDVSQVSCDAVERSFWKNVISHE 431
Query: 349 GNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMV 408
V V YG+DL TS GSGFPR D + D + +Y + WNLNN+P L+ S+L
Sbjct: 432 NPVSVKYGADLITSRVGSGFPRKED-KHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHF 490
Query: 409 HHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMR 468
+ I+G+MVPW+Y+GM FS FCWH EDH YS+NY+H+G+ K WY V G +A FE ++
Sbjct: 491 NTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALK 550
Query: 469 SSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLN 528
P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAGFN GLN
Sbjct: 551 KIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLN 610
Query: 529 CAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSPYLKREL 586
AEAVNFAP DWL G + Y + V SH+ELL V A L +S EL
Sbjct: 611 FAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEEL 670
Query: 587 LRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRP 646
+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+ C +
Sbjct: 671 IRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCALVCN-KH 726
Query: 647 AAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 680
C+EH +HLC C T+ YR L +L ++
Sbjct: 727 KKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 270 (100.1 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 53/129 (41%), Positives = 82/129 (63%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P+YYPTE+EF DP+EY+ KIR EAE++G+ KIVPP ++KPPFA+D +FTF +TQ +++
Sbjct: 57 PIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDKEAFTFRPRTQKLNE 116
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
++A + TF F + G V +G +DL +L + FGG ++V +
Sbjct: 117 VEA--IVKEKHTFIDRLINF-NRYSGLTFEFPVDRDGNIVDLYRLHRIVQNFGGCEEVNE 173
Query: 151 EKKWGEVFR 159
++KW +V R
Sbjct: 174 DEKWRDVAR 182
Score = 81 (33.6 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1697 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1750
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1751 CKPQAEESSTPQNVD 1765
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 2.5e-110, Sum P(6) = 2.5e-110
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1678 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1733
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1734 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1763
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 5.9e-110, Sum P(5) = 5.9e-110
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 1318 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 1373
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 1374 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 1412
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 9.5e-110, Sum P(5) = 9.5e-110
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 871 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 928
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 929 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 987
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 988 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 1047
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 1048 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 1107
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 1108 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 1167
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 1168 LKISLKEQTELEKVIN 1183
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 73 (30.8 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 259 EVMLLCDRCNKGWHVYCL--SPPLKHVPRGNWYCLECLNSDK 298
E L C C+ +HV C SP L+ +P G + C+ CL +
Sbjct: 1218 ESTLTCIMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCLRGQR 1259
Score = 62 (26.9 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 1084 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 1136
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1137 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 1191
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 1192 ASSLL 1196
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 1156 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 1214
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 1215 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 1273
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 1274 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 1327
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 1328 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 1378
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 1379 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 1438 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1493
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1494 ICPYC 1498
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 8.5e-109, Sum P(4) = 8.5e-109
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 1455 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 9.4e-111, Sum P(6) = 9.4e-111
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1666
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1667 AKKVVLDSGALSLDK 1681
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 54 (24.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 242 EDELD-QICEQCKSGL--HGEVM--LLCDRCNKGW-HVYCLSPPLKHVPRGNWY-CLECL 294
EDE + + C Q ++ L +G+ + ++C+ K W HV CL L+ + + Y C CL
Sbjct: 1406 EDESEFKSC-QARACLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSCL 1464
Query: 295 N 295
+
Sbjct: 1465 D 1465
Score = 50 (22.7 bits), Expect = 2.8e-110, Sum P(5) = 2.8e-110
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1704
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 2.4e-107, Sum P(5) = 2.4e-107
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 1347 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 1401
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 1402 --VENWKQRCKEIV 1413
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 7.9e-107, Sum P(5) = 7.9e-107
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1610 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1669
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1670 VV 1671
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1529 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1560
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 2.5e-110, Sum P(6) = 2.5e-110
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1777 KTPSPKHTNSRKKLRKAE 1794
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 9.4e-111, Sum P(6) = 9.4e-111
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1686 IAEGENLPVYLE 1697
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 856 (306.4 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 185/455 (40%), Positives = 249/455 (54%)
Query: 240 DKEDELDQI-CEQCKSGLHGEVMLLCD--RCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296
D ED +DQ+ C C G +++LLCD CN G H YC P L VP G W C +C+ S
Sbjct: 312 DDEDPMDQVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCIES 371
Query: 297 DKDSFGFVPG-----KRYTVESFRRVADRAKKKRFRSGSASRVQ---MEKKFWEIVEGAA 348
+ G G Y + SF A++ K F S+V +E+ FW+ V
Sbjct: 372 EDAKIGLDWGFYDADTEYNLNSFTEFANKWKCDYFGVKDVSQVSCDAVERSFWKNVISHE 431
Query: 349 GNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMV 408
V V YG+DL TS GSGFPR D + D + +Y + WNLNN+P L+ S+L
Sbjct: 432 NPVSVKYGADLITSRVGSGFPRKED-KHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHF 490
Query: 409 HHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMR 468
+ I+G+MVPW+Y+GM FS FCWH EDH YS+NY+H+G+ K WY V G +A FE ++
Sbjct: 491 NTGISGMMVPWVYVGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALK 550
Query: 469 SSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLN 528
P L Q DL + T NP +L GVP++SV Q G FVITFPR+YHAGFN GLN
Sbjct: 551 KIAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLN 610
Query: 529 CAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL--CVVAKSDLDSKVSPYLKREL 586
AEAVNFAP DWL G + Y + V SH+ELL V A L +S EL
Sbjct: 611 FAEAVNFAPIDWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEEL 670
Query: 587 LRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRP 646
+R+Y K++M RE L R G+ S + E + +E +C C+ L++ A+ C +
Sbjct: 671 IRIYEKQKMLRELLARLGV--SNRQMQQVMFEKI-PDEQRSCRFCKTTLFMCALVCN-KH 726
Query: 647 AAFVCLEHWEHLCE-CKTRKLHLLYRHTLAELYDL 680
C+EH +HLC C T+ YR L +L ++
Sbjct: 727 KKMTCVEHHDHLCNSCTTKDYRYQYRFELDQLNNM 761
Score = 270 (100.1 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 53/129 (41%), Positives = 82/129 (63%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P+YYPTE+EF DP+EY+ KIR EAE++G+ KIVPP ++KPPFA+D +FTF +TQ +++
Sbjct: 57 PIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKIVPPANFKPPFAIDKEAFTFRPRTQKLNE 116
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
++A + TF F + G V +G +DL +L + FGG ++V +
Sbjct: 117 VEA--IVKEKHTFIDRLINF-NRYSGLTFEFPVDRDGNIVDLYRLHRIVQNFGGCEEVNE 173
Query: 151 EKKWGEVFR 159
++KW +V R
Sbjct: 174 DEKWRDVAR 182
Score = 81 (33.6 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 1697 EKELKSLRARSMLYCICRKPY-DEKAMIACYQ-CDEWYHIDCV----KLLSAPEIYICAA 1750
E E KS +AR+ C KPY D + C C W+H+ C+ + ++ Y C++
Sbjct: 1408 ESEFKSCQARA-----CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSS 1462
Query: 1751 CKPQAEESSTPQNVD 1765
C A+ ++ + D
Sbjct: 1463 CLDHADSPTSSVSTD 1477
Score = 76 (31.8 bits), Expect = 2.5e-110, Sum P(6) = 2.5e-110
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1678 SLDKVFELIAEGENLPVYLEKELKSLR-ARSMLYCIC---RKPYDEKAMIACYQCDEWYH 1733
SLD++ + + + + +++K AR + C C K D ++ + C CD +H
Sbjct: 1172 SLDQIVHHQSSLREMQMRIFEKVKQANSARGLEACSCLGFNKSDDSESTLTCIMCDSEFH 1231
Query: 1734 IDCVK----LLSAPE-IYICAAC----KPQAEESSTPQN 1763
+ C + L PE ++C C +P ++ +T N
Sbjct: 1232 VRCCEWSPFLEKLPEGCFLCVRCLRGQRPVIDDVTTALN 1270
Score = 75 (31.5 bits), Expect = 5.9e-110, Sum P(5) = 5.9e-110
Identities = 27/101 (26%), Positives = 48/101 (47%)
Query: 1318 RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCA---QQSWS 1373
RC+ +D G + + + LT I K + W EQV + N K A +Q +S
Sbjct: 844 RCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRAKDAIYREQEYS 903
Query: 1374 LMLQLKELGEAAAFDCPELEKV--LSKVDKVENWKQRCKEI 1412
K + E +D +LE++ L KV ++++W R +++
Sbjct: 904 KEEIEKIIEEGDEYDI-KLEEIDELRKVIQMKDWSDRARKV 943
Score = 73 (30.8 bits), Expect = 9.5e-110, Sum P(5) = 9.5e-110
Identities = 51/316 (16%), Positives = 132/316 (41%)
Query: 871 ESEKLSQRISSAKVWR--DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLK 928
ES+++ + K+ R + + NK P + D ++KL + K + + + LL
Sbjct: 778 ESDEMLEEEGKPKLERIEEFIDSAKQNKYP---QTDQVHKLITIRHTAKSAIEKANQLLF 834
Query: 929 MIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHSDAIFWIARL 987
+ + + RC A + + V L++++ N+ + + L+++ W R
Sbjct: 835 KKVRTRT-KTRCQRADTRT-DTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNRA 892
Query: 988 NDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTK 1047
D + ++Q +E+ I++EG I+++++ + ++ ++A K K
Sbjct: 893 KDAIY-----REQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDRARKVTTWK 947
Query: 1048 MPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRA 1107
D + + E + + L + + + + + ++ QM + +
Sbjct: 948 ATPDMEKDIDFEYKLRYASSDILSL----IRDSPRNPTDGTSKLVFELQQMLRDANTLEV 1003
Query: 1108 SQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKF 1167
+ F P+LD++Q S +S L+ ++ F + ++ + +K ++ +
Sbjct: 1004 IANNFCENPALDQLQ---SIWQS-LRETDWFYEKYINMV--RYEIIHVAKIKSMIDAAIP 1057
Query: 1168 LKISLKEQTELEKVIN 1183
+ +T+L+K++N
Sbjct: 1058 VLSEFDLKTQLQKIVN 1073
Score = 73 (30.8 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 259 EVMLLCDRCNKGWHVYCL--SPPLKHVPRGNWYCLECLNSDK 298
E L C C+ +HV C SP L+ +P G + C+ CL +
Sbjct: 1218 ESTLTCIMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCLRGQR 1259
Score = 62 (26.9 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 30/125 (24%), Positives = 55/125 (44%)
Query: 1084 WEERAADILIH--KAQMCEFEDII-RASQDIFVVLPSLDEVQNEIS---TAKSWL-KNSE 1136
W+E + ++L K ++ E+ I A Q+ + P D+V I+ TAKS + K ++
Sbjct: 775 WKEESDEMLEEEGKPKLERIEEFIDSAKQNKY---PQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1137 LFLASAFAVAPASC----SLLRLESLKDLVSQSKFLKISLKEQTE-LEKVINNCERWQNH 1191
L C + E ++ L+ Q + + +L + LEK + E W+N
Sbjct: 832 LLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDCNLTVIIDKLEKWMEQVEMWRNR 891
Query: 1192 ASSLL 1196
A +
Sbjct: 892 AKDAI 896
Score = 62 (26.9 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 76/365 (20%), Positives = 149/365 (40%)
Query: 1156 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ-DARCLLDKDDIGDGLSN 1214
E ++ ++ + I L+E EL KVI + W + A + A ++KD +
Sbjct: 905 EEIEKIIEEGDEYDIKLEEIDELRKVIQ-MKDWSDRARKVTTWKATPDMEKDIDFEYKLR 963
Query: 1215 SLVSKIEQLITSMESAANCGLS-LGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV 1273
S I LI G S L F+ ++ L++A +TL A +F +P+L+ +
Sbjct: 964 YASSDILSLIRDSPRNPTDGTSKLVFELQQM--LRDA-NTLEVI--ANNFCE-NPALDQL 1017
Query: 1274 ESL-MAVAE-GLSTRCFSSMLWNSLIHGVK---WLKRALEVISA-PCKFKRCKLSDVEEV 1327
+S+ ++ E + +M+ +IH K + A+ V+S K + K+ +VE
Sbjct: 1018 QSIWQSLRETDWFYEKYINMVRYEIIHVAKIKSMIDAAIPVLSEFDLKTQLQKIVNVEIT 1077
Query: 1328 LAGCKGINFSFPV---VIGE-----LTSAIQKHKLWQEQVHQFFNLKCAQQS-WSLMLQL 1378
L+ I+ +F + G + I + +++ F A + + ++ +
Sbjct: 1078 LSKAAEISKAFETSKCLNGSEEHLGILDMISTMNAFTQRIAILFKPNNAYHNLFEILSER 1137
Query: 1379 KELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSLLGLLQKIKQSVHRS 1437
+L A L V + W Q + E + V ++SL + +I + V ++
Sbjct: 1138 DDLTPLAEGQTIPLYFQGGAVHPSDEWHQMKEFESLDQIVHHQSSLREMQMRIFEKVKQA 1197
Query: 1438 LYIYNKPHGSVSMTLCMCC---ESDSKELEFLICSACKDCYHLQCLRPTE-VDRNHAEAY 1493
N G + C C +SD E L C C +H++C + +++ +
Sbjct: 1198 ----NSARG---LEACSCLGFNKSDDSE-STLTCIMCDSEFHVRCCEWSPFLEKLPEGCF 1249
Query: 1494 ICPYC 1498
+C C
Sbjct: 1250 LCVRC 1254
Score = 61 (26.5 bits), Expect = 8.5e-109, Sum P(4) = 8.5e-109
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 1455 CCESDSKELEFLICSA-CKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + +++C A CK+ +H+ CL T + N Y C C
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSC 1463
Score = 57 (25.1 bits), Expect = 9.4e-111, Sum P(6) = 9.4e-111
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGS-----QWADV 1666
W +V ++ K I + Q Y KE + I D Y KL E++ + W+D
Sbjct: 881 WMEQV-EMWRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLEEIDELRKVIQMKDWSDR 939
Query: 1667 AKKVVLDSGALSLDK 1681
A+KV ++K
Sbjct: 940 ARKVTTWKATPDMEK 954
Score = 54 (24.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 242 EDELD-QICEQCKSGL--HGEVM--LLCDRCNKGW-HVYCLSPPLKHVPRGNWY-CLECL 294
EDE + + C Q ++ L +G+ + ++C+ K W HV CL L+ + + Y C CL
Sbjct: 1406 EDESEFKSC-QARACLKPYGDSVNWVMCEAGCKNWFHVICLGFTLREINDMHEYRCSSCL 1464
Query: 295 N 295
+
Sbjct: 1465 D 1465
Score = 50 (22.7 bits), Expect = 2.8e-110, Sum P(5) = 2.8e-110
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLR 1704
W + AK + S +++ ++I EG+ + LE E+ LR
Sbjct: 888 WRNRAKDAIYREQEYSKEEIEKIIEEGDEYDIKLE-EIDELR 928
Score = 50 (22.7 bits), Expect = 2.4e-107, Sum P(5) = 2.4e-107
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 1347 SAIQK-HKLWQEQVHQFFNLKCAQQSWSLMLQ-LKELGEAA-AFDCPELEKVLSKVDK-- 1401
SAI+K ++L ++V +C + + ++ L E A DC L ++ K++K
Sbjct: 824 SAIEKANQLLFKKVRTRTKTRCQRADTRTDTEGVRSLIEQMQAMDC-NLTVIIDKLEKWM 882
Query: 1402 --VENWKQRCKEIV 1413
VE W+ R K+ +
Sbjct: 883 EQVEMWRNRAKDAI 896
Score = 45 (20.9 bits), Expect = 7.9e-107, Sum P(5) = 7.9e-107
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 1610 NLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKK 1669
N W+ ++LE KP + +I+ ++ + N P+ KL+ + + A +
Sbjct: 773 NGWKEESDEMLEEEGKPKLERIEEFI-DSAKQNKYPQTDQVHKLITIRHTAKSAIEKANQ 831
Query: 1670 VV 1671
++
Sbjct: 832 LL 833
Score = 44 (20.5 bits), Expect = 6.8e-112, Sum P(6) = 6.8e-112
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1529 LLSDSEFFCRGIEAKDVLQEVVDVALECKTCL 1560
++ DSEF R E L+++ + C CL
Sbjct: 1224 IMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCL 1255
Score = 39 (18.8 bits), Expect = 2.5e-110, Sum P(6) = 2.5e-110
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1777 KTPSPKHTNSRKKLRKAE 1794
K PS H + KK RK +
Sbjct: 1379 KRPSVSHKETSKKSRKRQ 1396
Score = 38 (18.4 bits), Expect = 9.4e-111, Sum P(6) = 9.4e-111
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 1686 IAEGENLPVYLE 1697
+AEG+ +P+Y +
Sbjct: 1143 LAEGQTIPLYFQ 1154
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 957 (341.9 bits), Expect = 3.7e-111, Sum P(4) = 3.7e-111
Identities = 254/771 (32%), Positives = 386/771 (50%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 385
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 386 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 445
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 446 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 562
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 563 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 622
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 623 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 682
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 683 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 737
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 738 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 797
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMDA--VRD 768
+ + R S+L+++ +C L + S A G + +EA AG +M +RD
Sbjct: 798 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPDRVAGLQMTLAELRD 855
Query: 769 MV---NKLIEGRRWAEGIRDCLHKAENWSS-----LPGSDSEKVRLDCVNELLGFDPLPC 820
+ N L ++ L + E + + L S L + E G L
Sbjct: 856 FLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLER-G-QQLGV 913
Query: 821 NEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESEK-- 874
P LQ E+AR L E+ L+ ++ L LL + AS P V+ +
Sbjct: 914 EVPEAQQLQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAE 972
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAE 934
L + ++ A+ W + C+ + L + EA ++ + +P L + + +A
Sbjct: 973 LQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQSLKEALAKAR 1030
Query: 935 SCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+ A E G L +E L+ D V + EL L+ A W
Sbjct: 1031 AWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1081
Score = 217 (81.4 bits), Expect = 3.7e-111, Sum P(4) = 3.7e-111
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERRILDLYSLSKIVVEEGGYETICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 157 (60.3 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 809 VNELLG-FDPLPCNEPGHLI--LQNYAEEARSLIQEINAAL-SACSKISELELLYSRASG 864
+ + LG + LPC H I ++ E+ + E AL S S L+ L R
Sbjct: 853 LRDFLGQMNNLPCAM--HQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQ 910
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVP 921
L + + E+++L +++ A+ W D V++ ++ + AI +L S A +D
Sbjct: 911 LGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKA 969
Query: 922 ETDM--LLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSD 979
+ ++ LL + + E C EA R T+E ++ E + V++P ++ LK+ +
Sbjct: 970 QAELQELLTIAERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQSLKEALAK 1028
Query: 980 AIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-RE 1038
A WIA +++I NG D + +D+L ++ G L + +++L +E+++ AH RE
Sbjct: 1029 ARAWIADVDEIQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWRE 1083
Query: 1039 KALK 1042
KA K
Sbjct: 1084 KASK 1087
Score = 157 (60.3 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 84/380 (22%), Positives = 159/380 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 731 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 786
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 787 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPDRVA 844
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDELNCI 1010
+++ L EL DF M L D + ++ Q + L +
Sbjct: 845 GLQMTLAELRDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSL 904
Query: 1011 LKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVILQI 1065
L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 905 LERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSP 964
Query: 1066 EREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQN 1123
+K +L +L A RWEE+A L K E II +++I V LP++ ++
Sbjct: 965 AVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQSLKE 1024
Query: 1124 EISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVI 1182
++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE +
Sbjct: 1025 ALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLELQV 1075
Query: 1183 NNCERWQNHAS-SLLQDARC 1201
W+ AS + L+ C
Sbjct: 1076 LTAHSWREKASKTFLKKNSC 1095
Score = 80 (33.2 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 382
Query: 1509 FG 1510
FG
Sbjct: 383 FG 384
Score = 67 (28.6 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + ++E + +P + P
Sbjct: 969 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAI----IHEA---ENIPVHLPN 1018
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 1019 IQSLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1078
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1079 HSWREKASKTFLKKNSCYTLLEV 1101
Score = 65 (27.9 bits), Expect = 2.6e-17, Sum P(4) = 2.6e-17
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D + +L EL I +W + A
Sbjct: 930 WLDEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAH- 988
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLEKELKSLR 1704
+ L++ E +I E EN+PV+L ++SL+
Sbjct: 989 LCLEARQKHPPATLEAIIHEAENIPVHLPN-IQSLK 1023
Score = 61 (26.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 41/183 (22%), Positives = 70/183 (38%)
Query: 811 ELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIV 870
ELLG +PG +I+ E + + + +K S L LL + +S IC+
Sbjct: 1131 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLALLTTASSTASICVC 1190
Query: 871 ESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMI 930
++ + + + D + +C + V L S+ L P + +L
Sbjct: 1191 G--QVPAGVGALQC--DLCQDWFHGRC-----VTVPRLLSSQRSSL----PSSPLLAWWE 1237
Query: 931 GQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDI 990
+ C + R L+T+ LL L V +PE E L+ AI W R +
Sbjct: 1238 WDTKFLCPLCMRSRRPR--LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQV 1295
Query: 991 LVN 993
L +
Sbjct: 1296 LAS 1298
Score = 61 (26.5 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 329 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 381
Score = 59 (25.8 bits), Expect = 3.8e-111, Sum P(3) = 3.8e-111
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 1412 IVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSAC 1471
IV G++ G+LQ + + + + S + ++C+C + + + L C C
Sbjct: 1147 IVAFKEGEQKEKEGILQLRRTNSAKPSPLALLTTASSTASICVCGQVPAG-VGALQCDLC 1205
Query: 1472 KDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
+D +H +C+ P + + P ++E ++ +F PL +R L ++ LL
Sbjct: 1206 QDWFHGRCVTVPRLLSSQRSSLPSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1262
Score = 55 (24.4 bits), Expect = 3.7e-111, Sum P(4) = 3.7e-111
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1742
C+C + + C C +W+H CV +LLS+
Sbjct: 1188 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1222
Score = 55 (24.4 bits), Expect = 8.4e-15, Sum P(4) = 8.4e-15
Identities = 39/186 (20%), Positives = 74/186 (39%)
Query: 1256 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 1309
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 773 WANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 832
Query: 1310 ISA----PCKFK--RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFF 1363
+S P + + L+++ + L + + IG++ +++ + +Q + +
Sbjct: 833 VSGQEAGPDRVAGLQMTLAELRDFLGQMNNLPCAMHQ-IGDVKGILEQVEAYQTEAREA- 890
Query: 1364 NLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDKN 1421
L S L+ L E G+ + PE +++ +V++ W K + S G
Sbjct: 891 -LVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLA 948
Query: 1422 SLLGLL 1427
+ GLL
Sbjct: 949 IMRGLL 954
Score = 50 (22.7 bits), Expect = 3.3e-110, Sum P(3) = 3.3e-110
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 1449
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1273 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1326
Score = 48 (22.0 bits), Expect = 3.7e-111, Sum P(4) = 3.7e-111
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1048 LDDLEGLVAVGRDLPVGLE-ELRQL 1071
Score = 48 (22.0 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 44/212 (20%), Positives = 78/212 (36%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSP---SLEDVESLM----AV 1279
++S G LG + E +LQ W + L+ S +L + L+ +V
Sbjct: 901 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASV 960
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFP 1339
A + + L L +W ++A + A K L E ++ + I P
Sbjct: 961 APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATL---EAIIHEAENIPVHLP 1017
Query: 1340 VVIGELTSAIQKHKLWQEQVHQFFN---LKCAQQSWSLMLQLKELGEAAAFDCPELEKVL 1396
I L A+ K + W V + N C L+ +G EL ++
Sbjct: 1018 N-IQSLKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVA----VGRDLPVGLEELRQLE 1072
Query: 1397 SKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQ 1428
+V +W+++ + T + KNS LL+
Sbjct: 1073 LQVLTAHSWREKASK---TFL-KKNSCYTLLE 1100
Score = 47 (21.6 bits), Expect = 8.2e-12, Sum P(3) = 8.2e-12
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
+C Q +G+ L CD C +H C++ P
Sbjct: 1189 VCGQVPAGVGA---LQCDLCQDWFHGRCVTVP 1217
Score = 44 (20.5 bits), Expect = 1.4e-109, Sum P(3) = 1.4e-109
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1254 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1307
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(4) = 5.3e-13
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 305 CTKMTMRLRRNHSNAQFIESYVCRMC 330
Score = 37 (18.1 bits), Expect = 5.3e-13, Sum P(4) = 5.3e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 154 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 187
Score = 37 (18.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI-----EIDVLYKLES---EALDL 916
LP+ + E E L A W+ R+ ++++ A+ E+ + ES E+L
Sbjct: 1268 LPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGRLAELRQRLQAESKPEESLAY 1327
Query: 917 KID-------VPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPE 969
D +P+ LL+ S +E G L+ + +L +L + +PE
Sbjct: 1328 PSDGGEGTGNMPKVQGLLENGDSVTSPEKVATEEGSGKRDLELLSSILPQLSGPVLELPE 1387
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 936 (334.5 bits), Expect = 3.2e-110, Sum P(5) = 3.2e-110
Identities = 186/442 (42%), Positives = 267/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 243 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 302
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 303 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 362
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 363 SKEFGSGFP-VRDGKIKLSPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 419
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 420 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPD 479
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 480 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 539
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 540 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 599
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ CI C+ ++SA++C C+P VCL H + L
Sbjct: 600 TVRKLGVIDSERMDFELLPD-----DERQCIKCKTTCFMSAISCSCKPGLLVCLHHVKEL 654
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K L YR+TL +LY +
Sbjct: 655 CSCPPYKYKLRYRYTLDDLYPM 676
Score = 118 (46.6 bits), Expect = 3.2e-110, Sum P(5) = 3.2e-110
Identities = 71/339 (20%), Positives = 147/339 (43%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 680 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 737
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
AE C + + L G + + TVN + + Y + L D+
Sbjct: 738 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 797
Query: 991 LVNINGRKDQHN---VIDELNCI--LKEGASLRIQVD-DLP-LVEVE--LKKAHCREKAL 1041
L + + QH+ + +E+ L++ + + D +LP L E+ L++A E+
Sbjct: 798 LNRVEDFQ-QHSQKLLSEEMPSAAELQDLLDVSFEFDVELPQLAEMRTRLEQARWLEEVQ 856
Query: 1042 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 1097
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 857 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 916
Query: 1098 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 1155
+ ++ ++I LP+ +++ + A+ WL++ E P L
Sbjct: 917 HSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQVGGRV--PV------L 968
Query: 1156 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 1194
++L +LV++ + + + L LE ++ + W+ A++
Sbjct: 969 DTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAAN 1007
Score = 96 (38.9 bits), Expect = 3.2e-110, Sum P(5) = 3.2e-110
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 68 WKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEG 127
W+PPFA D+ F + Q +++L+A++ F + +++ E G+ L K E
Sbjct: 2 WQPPFACDVDKLHFTPRIQRLNELEAQTRV--KLNFLDQIAKYW-ELQGSTL-KIPHVER 57
Query: 128 EELDLCKLFNAAKRFGGYDKVVKEKKWGEV 157
+ LDL +L GG+ V K++KW ++
Sbjct: 58 KILDLFQLNKLVAEEGGFAVVCKDRKWTKI 87
Score = 95 (38.5 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
K +V + +C+ C S + E L+C C D YH CL P D + + CP C E
Sbjct: 234 KTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 292
Query: 1503 -SESVSQFG 1510
S+ FG
Sbjct: 293 CSKPQEAFG 301
Score = 83 (34.3 bits), Expect = 1.1e-106, Sum P(6) = 1.1e-106
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 821 ELQDLLDVSFEFDVELPQLAEMRTRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 874
Query: 1160 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
DL V + + + K L++++ E W + A SLL+
Sbjct: 875 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 912
Score = 80 (33.2 bits), Expect = 3.2e-110, Sum P(5) = 3.2e-110
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
P V + +C+C ++ + + + C C+D +H C+ + + ++CP+C+ E
Sbjct: 1102 PVQDVELKVCLCQKAPAAPM--IQCELCRDAFHTSCVVVPSISQG-PRIWLCPHCRRSE 1157
Score = 77 (32.2 bits), Expect = 3.5e-106, Sum P(4) = 3.5e-106
Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 1683 FELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLS- 1741
F L EG+ L + ELK C+C+K MI C C + +H CV + S
Sbjct: 1091 FRLANEGKLLSPVQDVELK--------VCLCQKA-PAAPMIQCELCRDAFHTSCVVVPSI 1141
Query: 1742 --APEIYICAACK 1752
P I++C C+
Sbjct: 1142 SQGPRIWLCPHCR 1154
Score = 76 (31.8 bits), Expect = 3.2e-110, Sum P(5) = 3.2e-110
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 1672 LDSGALSLDKVFELI--AEGENLPV---YLEKELKSLRARSMLYCICRKPY-DEKAMIAC 1725
++S L ++ +EL+ AE +LP Y E+E C +P DE + C
Sbjct: 1378 MNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC 1437
Query: 1726 Y-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C++W+H CV + ++ E YIC C
Sbjct: 1438 DGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1467
Score = 69 (29.3 bits), Expect = 3.1e-103, Sum P(5) = 3.1e-103
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1161 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGSGL 1218
Score = 67 (28.6 bits), Expect = 3.1e-06, Sum P(4) = 3.1e-06
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 261 MLLCDRCNKGWHVYCLS-PPLKHVPRGNWYCLECLNSDK 298
M+ C+ C +H C+ P + PR W C C S+K
Sbjct: 1121 MIQCELCRDAFHTSCVVVPSISQGPR-IWLCPHCRRSEK 1158
Score = 63 (27.2 bits), Expect = 5.6e-102, Sum P(5) = 5.6e-102
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1670
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 851 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 910
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYL 1696
+ SL+ + + E E +P YL
Sbjct: 911 LKARPRHSLNSLATAVKEIEEIPAYL 936
Score = 62 (26.9 bits), Expect = 2.2e-104, Sum P(5) = 2.2e-104
Identities = 17/95 (17%), Positives = 46/95 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P + L++ + AR +Q++ A L ++ L+ L +R +P+ +
Sbjct: 930 EEIPAYLPNGVALKDSVQRARDWLQDVEA-LQVGGRVPVLDTLIELVTRGRSIPVHLNSL 988
Query: 873 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 906
+L ++ + W++ + ++ P ++ ++VL
Sbjct: 989 PRLELLVAEVQAWKECAANTFLTENSPYSL-LEVL 1022
Score = 60 (26.2 bits), Expect = 8.5e-98, Sum P(4) = 8.5e-98
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
++W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 849 ARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 906
Query: 1721 A 1721
A
Sbjct: 907 A 907
Score = 58 (25.5 bits), Expect = 4.2e-104, Sum P(6) = 4.2e-104
Identities = 23/113 (20%), Positives = 54/113 (47%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 771 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSF 830
Query: 912 EALDLKIDVPETDMLLKMIGQA---ESCRARCSEALRGSMSLKTVELLLQELG 961
E D +++P+ + + QA E + C + S++L + L+ +LG
Sbjct: 831 E-FD--VELPQLAEMRTRLEQARWLEEVQQACLDP--SSLTLDDMRRLI-DLG 877
Score = 56 (24.8 bits), Expect = 5.6e-104, Sum P(4) = 5.6e-104
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1505
C + + E++++ C +C +H C+ + + E YIC C ++ S
Sbjct: 1424 CLQPEGDEVDWVQCDGSCNQWFHQVCVGVSP-EMAEKEDYICVRCTVKDAPS 1474
Score = 55 (24.4 bits), Expect = 8.7e-104, Sum P(6) = 8.7e-104
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 1198
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 769 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 814
Score = 55 (24.4 bits), Expect = 3.6e-99, Sum P(5) = 3.6e-99
Identities = 45/190 (23%), Positives = 75/190 (39%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 1042 EPLPSGKKKSTKLESLSDLERALSESKETA-SAMATLGEARLREMEA-------LQSFRL 1093
Query: 876 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 933
+ +D ++ C+ K PAA I +L +A + VP + I
Sbjct: 1094 ANEGKLLSPVQDVELKVCLCQKAPAAPMIQC--ELCRDAFHTSCVVVPSISQGPR-IWLC 1150
Query: 934 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1151 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
Query: 994 INGRKDQHNV 1003
N R Q V
Sbjct: 1205 GNLRSVQDRV 1214
Score = 48 (22.0 bits), Expect = 2.3e-99, Sum P(5) = 2.3e-99
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 1679 LDKVFELIAEGENLPVYL 1696
LD + EL+ G ++PV+L
Sbjct: 968 LDTLIELVTRGRSIPVHL 985
Score = 43 (20.2 bits), Expect = 2.7e-08, Sum P(6) = 2.7e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 886 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 923
R SV+ S CP A ++ +EA+++KI+ ET
Sbjct: 148 RQSVQP--SETCPPARRAK---RMRAEAMNIKIEPEET 180
Score = 41 (19.5 bits), Expect = 3.8e-106, Sum P(5) = 3.8e-106
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGT----SVGDKNSLLGLLQKIKQSVHRSLYIYNK-- 1443
PE + + +++ NW+ R ++++ + SV D+ GL Q+ + NK
Sbjct: 1179 PEGDALRYMIERTVNWQHRAQQLLSSGNLRSVQDRVGS-GLWYSRWQASAGQVSETNKVS 1237
Query: 1444 -PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYI 1494
P G+ S +L +S + + S + C L + P EV+ EA +
Sbjct: 1238 QPTGTTSFSLPDDWDSRASYVHSPFSSG-RSCIPLHGVSP-EVNELLMEAQL 1287
Score = 39 (18.8 bits), Expect = 1.1e-106, Sum P(6) = 1.1e-106
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 1255 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFSSM-LWNSLIHGVKWLK--RALEV 1309
HW KA S L P SL + + + E + + + L +S+ WL+ AL+V
Sbjct: 902 HWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGVALKDSVQRARDWLQDVEALQV 961
Score = 38 (18.4 bits), Expect = 5.1e-102, Sum P(6) = 5.1e-102
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 669 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 727
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 728 LLRHL-RLVT--QDAEKC 742
Score = 38 (18.4 bits), Expect = 7.1e-102, Sum P(5) = 7.1e-102
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 675 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 718
Score = 38 (18.4 bits), Expect = 2.2e-97, Sum P(5) = 2.2e-97
Identities = 46/219 (21%), Positives = 89/219 (40%)
Query: 828 LQNY--AEEARSL--IQEINAALSACSKISELELLYS---RASGLPICIVESEKLSQRIS 880
LQ++ A E + L +Q++ + C K ++ R + C+V +SQ
Sbjct: 1088 LQSFRLANEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDAFHTSCVVVPS-ISQ--- 1143
Query: 881 SAKVWR-DSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRAR 939
++W R+ S K P + +L L+ +++ +PE D L MI + + + R
Sbjct: 1144 GPRIWLCPHCRR--SEKPPLEKILPLLASLQR----IRVRLPEGDALRYMIERTVNWQHR 1197
Query: 940 CSEALRGSMSLKTVE------LLLQELGDFTVNMPELELLKQYHSDAIF-----WIARLN 988
+ L S +L++V+ L + E + Q F W +R +
Sbjct: 1198 AQQLL-SSGNLRSVQDRVGSGLWYSRWQASAGQVSETNKVSQPTGTTSFSLPDDWDSRAS 1256
Query: 989 DILVNIN-GRK--DQHNVIDELNCILKEGASLRIQVDDL 1024
+ + GR H V E+N +L E L++ + ++
Sbjct: 1257 YVHSPFSSGRSCIPLHGVSPEVNELLMEAQLLQVSLPEI 1295
Score = 38 (18.4 bits), Expect = 8.1e-08, Sum P(6) = 8.1e-08
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 104 RGHYERILNPYNLFLS-GDSLRCLQKPNLNTDTKDKEYKPHDIPQRQSVQPSETCPPARR 162
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 163 AKRMRAEAMNIKIEPEE 179
Score = 37 (18.1 bits), Expect = 7.7e-100, Sum P(6) = 7.7e-100
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 1158 LKDLVSQSKFLKISLKEQTELEKVI 1182
+ +L+ +++ L++SL E EL + +
Sbjct: 1278 VNELLMEAQLLQVSLPEIQELYQTL 1302
Score = 37 (18.1 bits), Expect = 7.7e-100, Sum P(6) = 7.7e-100
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1167 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1204
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 933 (333.5 bits), Expect = 4.7e-110, Sum P(4) = 4.7e-110
Identities = 185/442 (41%), Positives = 267/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 251 VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 310
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 311 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 370
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 371 SKEFGSGFP-VRDGKVKLSPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 427
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 428 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKKLAPELFISQPD 487
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 488 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 547
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 548 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 607
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ C+ C+ ++SA++C C+P VCL H + L
Sbjct: 608 TVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSALSCCCKPGLLVCLHHVQEL 662
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K L YR+TL +LY +
Sbjct: 663 CSCPPYKYKLRYRYTLDDLYPM 684
Score = 137 (53.3 bits), Expect = 4.7e-110, Sum P(4) = 4.7e-110
Identities = 74/341 (21%), Positives = 146/341 (42%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 688 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 745
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL-ELLKQYHS--DAIFWIARLN 988
AE C + + L G + + TVN EL + + Q H+ + L
Sbjct: 746 DAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVN--ELRQFVTQLHALPCVLSQTPLLK 803
Query: 989 DILVNINGRKDQHNV---------IDELNCILKEGASLRIQVDDLPLVEVELKKAHCREK 1039
D+L + + QH+ EL +L +++ L + V L++AH E+
Sbjct: 804 DLLNRVEDFQ-QHSQKLLSEEMPSASELQDLLDVSFEFDVELPQLAEMRVRLEQAHWLEE 862
Query: 1040 ALKAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHK 1095
+AC D + + LD +R++ V L EK L +L + W+++A +L +
Sbjct: 863 VQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKAR 922
Query: 1096 AQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLL 1153
+ + +++ ++I LP+ +++ + A+ WL+ E A P
Sbjct: 923 PRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQEVEALQAGGRV--PV----- 975
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASS 1194
L++L +LV++ + + + L LE ++ W+ A++
Sbjct: 976 -LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAAN 1015
Score = 115 (45.5 bits), Expect = 4.7e-110, Sum P(4) = 4.7e-110
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 60 CKIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKL 119
CK+ P W+PPFA D+ F + Q +++L+A++ F + +++ E G+ L
Sbjct: 2 CKVRDPHDWQPPFACDVDKLHFTPRIQRLNELEAQTRV--KLNFLDQIAKYW-ELQGSTL 58
Query: 120 NKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEV 157
K E + LDL +L GG+ V K++KW ++
Sbjct: 59 -KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKI 95
Score = 102 (41.0 bits), Expect = 4.2e-108, Sum P(5) = 4.2e-108
Identities = 56/268 (20%), Positives = 110/268 (41%)
Query: 1255 HWCKKALSFLSVSP--SLEDVESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVIS 1311
HW KA S L P SL + +++ E + + + L +S+ WL+ +E +
Sbjct: 910 HWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDWLQE-VEALQ 968
Query: 1312 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQS 1371
A + L + E++ + I P + L S + + +W+E F K S
Sbjct: 969 AGGRVP--VLDTLVELVTRGRCIPVHLPS-LPRLESLVAEVHVWKECAANTFLTK--NSS 1023
Query: 1372 WSLM-----------LQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS---- 1416
+SL+ L LK P +K +V+ + + ++ E T+
Sbjct: 1024 YSLLEVLCPRCDIGLLGLKRKQRKLKDPLPSGKKKSPRVESLSDLERTLMESRETASAMA 1083
Query: 1417 -VGDKNSL-LGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDC 1474
+G+ + + LQ ++Q+ L P V M +C+C ++ + + + C C+D
Sbjct: 1084 ALGEARAREMEALQSLRQANEEKLL---SPVHDVEMRVCVCQKAPAAPM--VQCELCRDA 1138
Query: 1475 YHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
+H C+ + + ++CP C+ E
Sbjct: 1139 FHTSCVAAPSIPQG-PRVWLCPNCRRSE 1165
Score = 98 (39.6 bits), Expect = 4.1e-10, Sum P(5) = 4.1e-10
Identities = 24/69 (34%), Positives = 32/69 (46%)
Query: 1443 KPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE 1502
K +V + +C+ C S S E L+C C D YH CL P D + + CP C E
Sbjct: 242 KTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGD-WRCPKCLAQE 300
Query: 1503 -SESVSQFG 1510
S+ FG
Sbjct: 301 CSKPQEAFG 309
Score = 80 (33.2 bits), Expect = 4.7e-110, Sum P(4) = 4.7e-110
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1697 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYICAACK 1752
EK L + M C+C+K M+ C C + +H CV S P+ +++C C+
Sbjct: 1105 EKLLSPVHDVEMRVCVCQKA-PAAPMVQCELCRDAFHTSCVAAPSIPQGPRVWLCPNCR 1162
Score = 78 (32.5 bits), Expect = 1.5e-104, Sum P(5) = 1.5e-104
Identities = 43/222 (19%), Positives = 94/222 (42%)
Query: 783 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLG----FDPLPCNEPGHLILQNYAEEARSL 838
+++ L +E+W S + +N L + +P + P L++ + AR
Sbjct: 901 LQELLTVSEHWDDKAKSLLKARPRHSLNSLAAVVKEIEEIPAHLPNGAALKDSVQRARDW 960
Query: 839 IQEINAALSACSKISELELLY---SRASGLPICIVESEKLSQRISSAKVWRDSVRKCISN 895
+QE+ A L A ++ L+ L +R +P+ + +L ++ VW++
Sbjct: 961 LQEVEA-LQAGGRVPVLDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAANTFLT 1019
Query: 896 KCPAAIEIDVLY-KLESEALDLKIDVPETDMLLKMIGQAESCRARC-SEALRGSMSLKTV 953
K + ++VL + + L LK + L G+ +S R S+ R M +
Sbjct: 1020 KNSSYSLLEVLCPRCDIGLLGLKRKQRKLKDPLPS-GKKKSPRVESLSDLERTLMESRET 1078
Query: 954 ELLLQELGDFTVN-MPELELLKQYHSDAIFWIARLNDILVNI 994
+ LG+ M L+ L+Q + + + ++ ++D+ + +
Sbjct: 1079 ASAMAALGEARAREMEALQSLRQANEEKL--LSPVHDVEMRV 1118
Score = 77 (32.2 bits), Expect = 4.2e-108, Sum P(5) = 4.2e-108
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +D++ S + V LP L E++ + A WL+ E+ A + P+S +L + L
Sbjct: 829 ELQDLLDVSFEFDVELPQLAEMRVRLEQAH-WLE--EVQQA---CLDPSSLTLDDMRRLI 882
Query: 1160 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
DL V + + + K L++++ E W + A SLL+
Sbjct: 883 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 920
Score = 71 (30.1 bits), Expect = 9.1e-07, Sum P(4) = 9.1e-07
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGN--WYCLECLNSDK 298
M+ C+ C +H C++ P +P+G W C C S+K
Sbjct: 1129 MVQCELCRDAFHTSCVAAP--SIPQGPRVWLCPNCRRSEK 1166
Score = 69 (29.3 bits), Expect = 1.3e-103, Sum P(5) = 1.3e-103
Identities = 45/264 (17%), Positives = 113/264 (42%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 779 VNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSASELQDLLDVSF 838
Query: 912 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPEL 970
E D+++ + E + L+ E + C + S++L + L+ +LG +
Sbjct: 839 E-FDVELPQLAEMRVRLEQAHWLEEVQQACLDP--SSLTLDDMRRLI-DLGVGLAPYSAV 894
Query: 971 ELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVE 1030
E + + +D ++ + +H+ ++ L ++KE + + + ++
Sbjct: 895 EKAMARLQELLTVSEHWDDKAKSLLKARPRHS-LNSLAAVVKEIEEIPAHLPNGAALKDS 953
Query: 1031 LKKAH--CRE-KALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEER 1087
+++A +E +AL+A LD + ++ + + L L ++A W+E
Sbjct: 954 VQRARDWLQEVEALQAGGRVPVLDTLVELVTRGRCIPVHLPSL-PRLESLVAEVHVWKEC 1012
Query: 1088 AADILIHKAQMCEFEDIIRASQDI 1111
AA+ + K +++ DI
Sbjct: 1013 AANTFLTKNSSYSLLEVLCPRCDI 1036
Score = 67 (28.6 bits), Expect = 1.5e-104, Sum P(5) = 1.5e-104
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1169 LEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSSGHLKSLQDPVGSGL 1226
Score = 60 (26.2 bits), Expect = 4.2e-108, Sum P(5) = 4.2e-108
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 1713 CRKPY-DEKAMIACY-QCDEWYHIDCVKL---LSAPEIYICAAC 1751
C +P DE + C C W+H CV + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSPETAEEEDYVCVRC 1475
Score = 60 (26.2 bits), Expect = 2.5e-106, Sum P(5) = 2.5e-106
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
L + L+ V+Q L L + L+ ++N E +Q H+ LL + + ++ D L
Sbjct: 777 LTVNELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEE--MPSASELQDLL 834
Query: 1213 SNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNAC 1251
S +E + A + L H + E+Q AC
Sbjct: 835 DVSFEFDVE-----LPQLAEMRVRLE-QAHWLEEVQQAC 867
Score = 60 (26.2 bits), Expect = 4.9e-104, Sum P(5) = 4.9e-104
Identities = 19/86 (22%), Positives = 37/86 (43%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1670
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 859 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 918
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYL 1696
+ SL+ + ++ E E +P +L
Sbjct: 919 LKARPRHSLNSLAAVVKEIEEIPAHL 944
Score = 59 (25.8 bits), Expect = 8.8e-100, Sum P(4) = 8.8e-100
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 1661 SQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEK 1720
+ W + ++ LD +L+LD + LI G L Y E R + +L + +D+K
Sbjct: 857 AHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDK 914
Query: 1721 A 1721
A
Sbjct: 915 A 915
Score = 52 (23.4 bits), Expect = 9.6e-107, Sum P(5) = 9.6e-107
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 1455 CCESDSKELEFLICS-ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C + + E++++ C +C +H C+ + + E Y+C C
Sbjct: 1432 CLQPEGDEVDWVQCDGSCSRWFHQVCVGVSP-ETAEEEDYVCVRC 1475
Score = 48 (22.0 bits), Expect = 5.0e-99, Sum P(5) = 5.0e-99
Identities = 38/177 (21%), Positives = 68/177 (38%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
DPLP + +++ ++ R+L++ A SA + + E A + EKL
Sbjct: 1050 DPLPSGKKKSPRVESLSDLERTLMESRETA-SAMAALGEARAREMEALQ-SLRQANEEKL 1107
Query: 876 SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQAE 934
+ ++ R C+ K PAA + +L +A + P + +
Sbjct: 1108 LSPVHDVEM-----RVCVCQKAPAAPMVQC--ELCRDAFHTSCVAAPSIPQGPR-VWLCP 1159
Query: 935 SCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 991
+CR SE L+ + LL L V +PE + L+ + W R +L
Sbjct: 1160 NCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLL 1210
Score = 47 (21.6 bits), Expect = 2.3e-102, Sum P(5) = 2.3e-102
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 1679 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC 1713
LD + EL+ G +PV+L L+SL A ++ C
Sbjct: 976 LDTLVELVTRGRCIPVHLPSLPRLESLVAEVHVWKEC 1012
Score = 44 (20.5 bits), Expect = 3.7e-102, Sum P(5) = 3.7e-102
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLE-SLKDLVSQSKFLKISLKEQTELEKVI 1182
S W N +L S F+ + L + + +L+ +++ L++SL E EL + +
Sbjct: 1254 SLPDDW-DNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTL 1310
Score = 42 (19.8 bits), Expect = 5.3e-98, Sum P(4) = 5.3e-98
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 916 LKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVE------LLLQELGDFTVNMPE 969
+++ +PE D L MI + S + R + L S LK+++ LL +PE
Sbjct: 1182 IRVRLPEGDALRYMIERTVSWQHRARQLL-SSGHLKSLQDPVGSGLLCGRWQATAGQVPE 1240
Query: 970 LELLKQYHSDAIF-----WIARLNDILVNIN-GRK--DQHNVIDELNCILKEGASLRIQV 1021
+ Q F W R + + + GR H + E+N +L E L++ +
Sbjct: 1241 TSKMSQPPGPTSFSLPDDWDNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSL 1300
Query: 1022 DDLP-LVEVELKKAHCREKA 1040
++ L + L K ++A
Sbjct: 1301 PEIQELYQTLLAKPSPAQQA 1320
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(5) = 3.2e-10
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 886 RDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPET 923
R SV+ + CP A ++ +EA+++KI+ ET
Sbjct: 156 RQSVQP--AETCPPARRAK---RMRAEAMNIKIEPEET 188
Score = 40 (19.1 bits), Expect = 3.2e-10, Sum P(5) = 3.2e-10
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 997 RKDQHNVIDELNCILKEGASLR-IQVDDLPLVEVELK-KAHC--REKALKACDTKMPLDF 1052
R +++ N L G SLR +Q +L + + K H + ++++ +T P
Sbjct: 112 RGHYERILNPYNLFLS-GDSLRCLQKPNLSTDTKDKEYKPHGIPQRQSVQPAETCPPARR 170
Query: 1053 IRQVTAEAVILQIEREK 1069
+++ AEA+ ++IE E+
Sbjct: 171 AKRMRAEAMNIKIEPEE 187
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(4) = 0.00044
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 572 SDLDSKVSPYLKRELLRVYTKERMWRERLWRKGIIK 607
S L+SK+ L+RE L +R+ + R +K IK
Sbjct: 1344 SSLESKLKRRLEREGLSSERWDRITKMRAPKKKRIK 1379
Score = 38 (18.4 bits), Expect = 4.9e-104, Sum P(5) = 4.9e-104
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 677 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 735
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 736 LLRHL-RLVT--QDAEKC 750
Score = 38 (18.4 bits), Expect = 9.7e-102, Sum P(5) = 9.7e-102
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 683 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 726
Score = 38 (18.4 bits), Expect = 1.6e-101, Sum P(5) = 1.6e-101
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
++ + Q I V LP D ++ I SW + L+S
Sbjct: 1175 LLASLQRIRVRLPEGDALRYMIERTVSWQHRARQLLSS 1212
Score = 37 (18.1 bits), Expect = 1.4e-107, Sum P(5) = 1.4e-107
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 1423
PE + + +++ +W+ R ++++ S G SL
Sbjct: 1187 PEGDALRYMIERTVSWQHRARQLL--SSGHLKSL 1218
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1543 KDVLQEVVDVALECKTCLTDIVK 1565
KDV V +E K C+T+ K
Sbjct: 211 KDVKSSVKQEPVEKKECVTESEK 233
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 960 (343.0 bits), Expect = 4.9e-109, Sum P(5) = 4.9e-109
Identities = 254/774 (32%), Positives = 386/774 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 344
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 345 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 404
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 405 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 521
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 522 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 581
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 582 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 641
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 642 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 696
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 697 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 756
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 757 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLAELRA 814
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L LG +
Sbjct: 815 FLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEV 874
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 875 PEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKA 928
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 929 QAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALA 986
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+A + A E G L +E L+ D V + EL L+ A W
Sbjct: 987 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1040
Score = 176 (67.0 bits), Expect = 4.9e-109, Sum P(5) = 4.9e-109
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQ 92
L+
Sbjct: 75 LE 76
Score = 154 (59.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 1008
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 1063
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 80 (33.2 bits), Expect = 5.9e-14, Sum P(5) = 5.9e-14
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 341
Query: 1509 FG 1510
FG
Sbjct: 342 FG 343
Score = 68 (29.0 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + ++E + +P + P
Sbjct: 928 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAI----IHEA---ENIPVHLPN 977
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 978 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1037
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1038 HSWREKASKTFLKKNSCYTLLEV 1060
Score = 64 (27.6 bits), Expect = 5.9e-14, Sum P(5) = 5.9e-14
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D + +L EL I +W + A
Sbjct: 889 WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAH- 947
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 948 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 988
Score = 62 (26.9 bits), Expect = 4.9e-109, Sum P(5) = 4.9e-109
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 61 (26.5 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 121/591 (20%), Positives = 230/591 (38%)
Query: 979 DAIFWIARLNDILVNINGRK--DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
D + ++ +ND+ + R+ +DEL +L + L+++ + + K
Sbjct: 685 DGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHK---LKVRAESF---DTWANKVRV 738
Query: 1037 REKALKACD-TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI-- 1093
AL+ D K L+ +R + +EA + +L L L+ A RA ++
Sbjct: 739 ---ALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQ 795
Query: 1094 ----HKA---QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA---F 1143
H+ QM E +RA D LP ++I K L+ E + A A
Sbjct: 796 EAGPHRVAGLQMTLAE--LRAFLDQMNNLPC---AMHQIGDVKGILEQVEAYQAEAREAL 850
Query: 1144 AVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARCL 1202
A P+S LL+ L+ + + L + + E +L++ + RW + +L AR
Sbjct: 851 ASLPSSPGLLQ-----SLLERGRQLGVEVPEAQQLQRQVEQA-RWLDEVKRTLAPSAR-- 902
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLH-WCKKAL 1261
++ + L+ + S A S D + +ELQ + W +KA
Sbjct: 903 -----------RGTLAVMRGLLVAGASVAP---SPAVDKAQ-AELQELLTIAERWEEKAH 947
Query: 1262 SFLSVSPSLED--VESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISA---PCK 1315
L +E+++ AE + + L +L W+ E+ + PC
Sbjct: 948 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC- 1006
Query: 1316 FKRCKLSDVEEVLAGCKGINFSFPVVIGELTS----AIQKHKLWQEQVHQFFNLKCAQQS 1371
L D+E ++A + PV + EL + H W+E+ + F LK
Sbjct: 1007 -----LDDLEGLVA----VGRDLPVGLEELRQLELQVLTAHS-WREKASKTF-LK-KNSC 1054
Query: 1372 WSLMLQLKELGEAAAFDCPE---LEKVLS--KVD------KVENWKQRCKEIVGTSVGDK 1420
++L+ L +A + +EK L K D ++ + IV G++
Sbjct: 1055 YTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQ 1114
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
G+LQ + + + + + S + ++C+C + + + L C C+D +H +C+
Sbjct: 1115 KEKEGILQLRRTNSAKPSPLASPNTSSSATSICVCGQVPAG-VGALQCDLCQDWFHGRCV 1173
Query: 1481 R-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1174 SVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1221
Score = 61 (26.5 bits), Expect = 8.7e-08, Sum P(4) = 8.7e-08
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 288 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 340
Score = 52 (23.4 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1148 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1183
Score = 50 (22.7 bits), Expect = 5.7e-107, Sum P(4) = 5.7e-107
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R L +
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAS 1257
Score = 48 (22.0 bits), Expect = 4.9e-109, Sum P(5) = 4.9e-109
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 143 GGYDKVVKEKKWGEV 157
GGY+ + K+++W V
Sbjct: 82 GGYEAICKDRRWARV 96
Score = 48 (22.0 bits), Expect = 4.9e-109, Sum P(5) = 4.9e-109
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 1.5e-106, Sum P(4) = 1.5e-106
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGR 1266
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 811 ELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
ELLG +PG +I+ + +E ++Q + SA K S L + +S I
Sbjct: 1090 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLASPNTSSSATSI 1146
Query: 868 CI 869
C+
Sbjct: 1147 CV 1148
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(4) = 5.2e-07
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 865 LPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI 901
LP+ + E E L A W+ R+ ++++ A+
Sbjct: 1227 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTAL 1263
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(5) = 9.7e-10
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 264 CTKMTMRLRRNHSNAQFIESYVCRMC 289
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(5) = 9.7e-10
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 113 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 146
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 956 (341.6 bits), Expect = 1.6e-108, Sum P(5) = 1.6e-108
Identities = 253/774 (32%), Positives = 386/774 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 344
Query: 304 VPGKR-YTVESFRRVAD--RAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD +A +EK+FW +V +V V YG+D+
Sbjct: 345 EQATREYTLQSFGEMADSFKADYSNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 404
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 405 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 521
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 522 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 581
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 582 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 641
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KGI ++ R+ E + +++ CI C+ +LSA+AC P VCL H L
Sbjct: 642 ALLEKGITEAE----REAFELL-PDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDL 696
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L YR+TL EL + L V + ++ + + L
Sbjct: 697 CKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRAL 756
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMD-----A 765
+ + R S+L+++ +C L + S A G + +EA AG +M A
Sbjct: 757 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPHRVAGLQMTLAELRA 814
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENW--------SSLPGSDSEKVRLDCVNELLGFDP 817
D +N L ++ L + E + +SLP S L LG +
Sbjct: 815 FLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEV 874
Query: 818 LPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESE 873
+ LQ E+AR L E+ L+ ++ L LL + AS P V+
Sbjct: 875 PEAQQ-----LQRQVEQARWL-DEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKA 928
Query: 874 K--LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIG 931
+ L + ++ A+ W + C+ + L + EA ++ + +P L + +
Sbjct: 929 QAELQELLTIAERWEEKAHLCLEARQKHPPA--TLEAIIHEAENIPVHLPNIQALKEALA 986
Query: 932 QAESCRARCSEALRGSM--SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+A + A E G L +E L+ D V + EL L+ A W
Sbjct: 987 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1040
Score = 176 (67.0 bits), Expect = 1.6e-108, Sum P(5) = 1.6e-108
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQ 92
L+
Sbjct: 75 LE 76
Score = 154 (59.3 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 60/234 (25%), Positives = 115/234 (49%)
Query: 818 LPCNEPGHLI--LQNYAEEARSLIQEINAALSAC-SKISELELLYSRASGLPICIVESEK 874
LPC H I ++ E+ + E AL++ S L+ L R L + + E+++
Sbjct: 822 LPCAM--HQIGDVKGILEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQ 879
Query: 875 LSQRISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDM--LLKM 929
L +++ A+ W D V++ ++ + A+ +L S A +D + ++ LL +
Sbjct: 880 LQRQVEQAR-WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTI 938
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
+ E C EA R T+E ++ E + V++P ++ LK+ + A WIA +++
Sbjct: 939 AERWEEKAHLCLEA-RQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDE 997
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC-REKALK 1042
I NG D + +D+L ++ G L + +++L +E+++ AH REKA K
Sbjct: 998 IQ---NG--DHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1046
Score = 143 (55.4 bits), Expect = 1.9e-18, Sum P(4) = 1.9e-18
Identities = 83/382 (21%), Positives = 160/382 (41%)
Query: 839 IQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCP 898
+ IN S L Y+ LP + KL R S W + VR + +
Sbjct: 690 LSHINDLCKCSSSRQYLRYRYT-LDELPAML---HKLKVRAESFDTWANKVRVALEVEDG 745
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS----LK 951
++ L LESEA + + P +++L ++ + +AE+C +R + G + +
Sbjct: 746 RKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPHRVA 803
Query: 952 TVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDE---LN 1008
+++ L EL F M L D + ++ R+ ++ L
Sbjct: 804 GLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVE--AYQAEAREALASLPSSPGLLQ 861
Query: 1009 CILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVIL 1063
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 862 SLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAP 921
Query: 1064 QIEREKLFIDLSGVLAAAMRWEERAADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
+K +L +L A RWEE+A L K E II +++I V LP++ +
Sbjct: 922 SPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQAL 981
Query: 1122 QNEISTAKSWLKN-SELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEK 1180
+ ++ A++W+ + E+ + P C L+ L+ LV+ + L + L+E +LE
Sbjct: 982 KEALAKARAWIADVDEIQNGDHY---P--C----LDDLEGLVAVGRDLPVGLEELRQLEL 1032
Query: 1181 VINNCERWQNHAS-SLLQDARC 1201
+ W+ AS + L+ C
Sbjct: 1033 QVLTAHSWREKASKTFLKKNSC 1054
Score = 80 (33.2 bits), Expect = 5.9e-14, Sum P(5) = 5.9e-14
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 341
Query: 1509 FG 1510
FG
Sbjct: 342 FG 343
Score = 68 (29.0 bits), Expect = 6.2e-11, Sum P(4) = 6.2e-11
Identities = 30/143 (20%), Positives = 59/143 (41%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A ++ L RW E CL + P + E + ++E + +P + P
Sbjct: 928 AQAELQELLTIAERWEEKAHLCLEARQKH---PPATLEAI----IHEA---ENIPVHLPN 977
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L+ +AR+ I +++ + + +LE L + LP+ + E +L ++ +A
Sbjct: 978 IQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTA 1037
Query: 883 KVWRDSVRKCI--SNKCPAAIEI 903
WR+ K N C +E+
Sbjct: 1038 HSWREKASKTFLKKNSCYTLLEV 1060
Score = 64 (27.6 bits), Expect = 5.9e-14, Sum P(5) = 5.9e-14
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 1612 WRVRVSKLLE-GLTKPTIGQIQNYLKEGLLMNISPK-DHYRQKLMELNRIGSQWADVAKK 1669
W V + L + T+ ++ L G + SP D + +L EL I +W + A
Sbjct: 889 WLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAH- 947
Query: 1670 VVLDSGALSLDKVFE-LIAEGENLPVYLE--KELKSLRARS 1707
+ L++ E +I E EN+PV+L + LK A++
Sbjct: 948 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKA 988
Score = 62 (26.9 bits), Expect = 1.6e-108, Sum P(5) = 1.6e-108
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSAP 1743
C+C + + C C +W+H CV +LLS+P
Sbjct: 1147 CVCGQVPAGVGALQCDLCQDWFHGRCVSVPRLLSSP 1182
Score = 61 (26.5 bits), Expect = 8.0e-09, Sum P(3) = 8.0e-09
Identities = 121/591 (20%), Positives = 230/591 (38%)
Query: 979 DAIFWIARLNDILVNINGRK--DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
D + ++ +ND+ + R+ +DEL +L + L+++ + + K
Sbjct: 685 DGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHK---LKVRAESF---DTWANKVRV 738
Query: 1037 REKALKACD-TKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILI-- 1093
AL+ D K L+ +R + +EA + +L L L+ A RA ++
Sbjct: 739 ---ALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQ 795
Query: 1094 ----HKA---QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASA---F 1143
H+ QM E +RA D LP ++I K L+ E + A A
Sbjct: 796 EAGPHRVAGLQMTLAE--LRAFLDQMNNLPC---AMHQIGDVKGILEQVEAYQAEAREAL 850
Query: 1144 AVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHAS-SLLQDARCL 1202
A P+S LL+ L+ + + L + + E +L++ + RW + +L AR
Sbjct: 851 ASLPSSPGLLQ-----SLLERGRQLGVEVPEAQQLQRQVEQA-RWLDEVKRTLAPSAR-- 902
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLH-WCKKAL 1261
++ + L+ + S A S D + +ELQ + W +KA
Sbjct: 903 -----------RGTLAVMRGLLVAGASVAP---SPAVDKAQ-AELQELLTIAERWEEKAH 947
Query: 1262 SFLSVSPSLED--VESLMAVAEGLSTRCFS-SMLWNSLIHGVKWLKRALEVISA---PCK 1315
L +E+++ AE + + L +L W+ E+ + PC
Sbjct: 948 LCLEARQKHPPATLEAIIHEAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPC- 1006
Query: 1316 FKRCKLSDVEEVLAGCKGINFSFPVVIGELTS----AIQKHKLWQEQVHQFFNLKCAQQS 1371
L D+E ++A + PV + EL + H W+E+ + F LK
Sbjct: 1007 -----LDDLEGLVA----VGRDLPVGLEELRQLELQVLTAHS-WREKASKTF-LK-KNSC 1054
Query: 1372 WSLMLQLKELGEAAAFDCPE---LEKVLS--KVD------KVENWKQRCKEIVGTSVGDK 1420
++L+ L +A + +EK L K D ++ + IV G++
Sbjct: 1055 YTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQ 1114
Query: 1421 NSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCL 1480
G+LQ + + + + + S + ++C+C + + + L C C+D +H +C+
Sbjct: 1115 KEKEGILQLRRTNSAKPSPLASPNTSSSATSICVCGQVPAG-VGALQCDLCQDWFHGRCV 1173
Query: 1481 R-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIELL 1530
P + P ++E ++ +F PL +R L ++ LL
Sbjct: 1174 SVPRLLSSPRPSPTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILALL 1221
Score = 61 (26.5 bits), Expect = 8.7e-08, Sum P(4) = 8.7e-08
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 288 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 340
Score = 52 (23.4 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPR 285
+C Q +G+ L CD C +H C+S P L PR
Sbjct: 1148 VCGQVPAGVGA---LQCDLCQDWFHGRCVSVPRLLSSPR 1183
Score = 49 (22.3 bits), Expect = 2.2e-106, Sum P(4) = 2.2e-106
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL 991
L+T+ LL L V +PE E L+ AI W R L
Sbjct: 1214 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQAL 1255
Score = 48 (22.0 bits), Expect = 1.6e-108, Sum P(5) = 1.6e-108
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 143 GGYDKVVKEKKWGEV 157
GGY+ + K+++W V
Sbjct: 82 GGYEAICKDRRWARV 96
Score = 48 (22.0 bits), Expect = 1.6e-108, Sum P(5) = 1.6e-108
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 1679 LDKVFELIAEGENLPVYLEKELKSL 1703
LD + L+A G +LPV LE EL+ L
Sbjct: 1007 LDDLEGLVAVGRDLPVGLE-ELRQL 1030
Score = 46 (21.3 bits), Expect = 4.6e-106, Sum P(4) = 4.6e-106
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A L +D LL +
Sbjct: 1213 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALAFEDVTALLGR 1266
Score = 42 (19.8 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 61 KIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLN 120
K V + +PP A F F T+ + LQ+ DS F+ +YS V T+L
Sbjct: 329 KCVMAECKRPPEA-----FGFEQATRE-YTLQSFGEMADS--FKADYSNMPVHMVPTELV 380
Query: 121 KKVFF 125
+K F+
Sbjct: 381 EKEFW 385
Score = 40 (19.1 bits), Expect = 3.5e-08, Sum P(4) = 3.5e-08
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 811 ELLGFDPLPCNEPGHLIL---QNYAEEARSLIQEINAALSACSKISELELLYSRASGLPI 867
ELLG +PG +I+ + +E ++Q + SA K S L + +S I
Sbjct: 1090 ELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQ-LRRTNSA--KPSPLASPNTSSSATSI 1146
Query: 868 CI 869
C+
Sbjct: 1147 CV 1148
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(5) = 9.7e-10
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1479 CLRPT-EVDRNHA-----EAYICPYC 1498
C + T + RNH+ E+Y+C C
Sbjct: 264 CTKMTMRLRRNHSNAQFIESYVCRMC 289
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(5) = 9.7e-10
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 113 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 146
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 935 (334.2 bits), Expect = 6.0e-106, Sum P(3) = 6.0e-106
Identities = 185/442 (41%), Positives = 267/442 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C SG + +LLCD C+ +H +CL PPL VP+G+W C +CL + +++FGF
Sbjct: 153 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 212
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT+ +F +AD K F +EK+FW +V +V V YG+D+
Sbjct: 213 EQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIA 272
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + + EY +S WNLNN+P ++ S+L + +I G+ +PWL
Sbjct: 273 SKEFGSGFP-VRDGKIKLSPEE--EEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWL 329
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM FS+FCWH EDH YS+NY HWG+PK WY VPG A E VM+ P+LF +QPD
Sbjct: 330 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPD 389
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ + VPVY Q G FVITFPR+YH+GFN G N AEAVNF DW
Sbjct: 390 LLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDW 449
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVA-KSD-LDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y+ H+ V SH+E++C +A K+D LD V+ +++++ + E+ RE
Sbjct: 450 LPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRE 509
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
+ + G+I S M P+ ++ C+ C+ ++SA++C C+P VCL H + L
Sbjct: 510 TVRKLGVIDSERMDFELLPD-----DERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKEL 564
Query: 659 CECKTRKLHLLYRHTLAELYDL 680
C C K L YR+TL +LY +
Sbjct: 565 CSCPPYKYKLRYRYTLDDLYPM 586
Score = 121 (47.7 bits), Expect = 6.0e-106, Sum P(3) = 6.0e-106
Identities = 69/337 (20%), Positives = 142/337 (42%)
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDML--LKMIGQ 932
L R S W +V + + K + V +K E ++K P+ D+L L+++ Q
Sbjct: 590 LKLRAESYNEWALNVNEALEAKINKKKSL-VSFKALIEESEMK-KFPDNDLLRHLRLVTQ 647
Query: 933 -AESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIF-WIARLNDI 990
AE C + + L G + + TVN + + Y + L D+
Sbjct: 648 DAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDL 707
Query: 991 LVNINGRKDQHN--VIDE-------LNCILKEGASLRIQVDDLPLVEVELKKAHCREKAL 1041
L + + QH+ ++ E L +L +++ L + + L++A E+
Sbjct: 708 LNRVEDFQ-QHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQ 766
Query: 1042 KAC-D-TKMPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIHKAQ 1097
+AC D + + LD +R++ V L EK L +L + W+++A +L + +
Sbjct: 767 QACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPR 826
Query: 1098 --MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRL 1155
+ ++ ++I LP+ +++ + A+ WL++ E A P L
Sbjct: 827 HSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRV--PV------L 878
Query: 1156 ESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHA 1192
++L +LV++ + + + L LE ++ + W+ A
Sbjct: 879 DTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECA 915
Score = 84 (34.6 bits), Expect = 6.0e-106, Sum P(3) = 6.0e-106
Identities = 26/133 (19%), Positives = 59/133 (44%)
Query: 1375 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSV 1434
+L LK P +K +K++ + + ++ E T+ + LG + +
Sbjct: 940 LLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETA--SAMATLGEARLREMEA 997
Query: 1435 HRSLYIYNK-----PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNH 1489
+SL + N+ P V + +C+C ++ + + + C C+D +H C+ + +
Sbjct: 998 LQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPM--IQCELCRDAFHTSCVAVPSISQG- 1054
Query: 1490 AEAYICPYCQYFE 1502
++CP+C+ E
Sbjct: 1055 LRIWLCPHCRRSE 1067
Score = 80 (33.2 bits), Expect = 1.2e-101, Sum P(3) = 1.2e-101
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 1100 EFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLK 1159
E +D++ S + V LP L E++ + A+ WL+ E+ A + P+S +L + L
Sbjct: 731 ELQDLLDVSFEFDVELPQLAEMRIRLEQAR-WLE--EVQQA---CLDPSSLTLDDMRRLI 784
Query: 1160 DL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
DL V + + + K L++++ E W + A SLL+
Sbjct: 785 DLGVGLAPYSAVE-KAMARLQELLTVSEHWDDKAKSLLK 822
Score = 71 (30.1 bits), Expect = 1.4e-104, Sum P(3) = 1.4e-104
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 1632 QNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1691
Q LKE L N K + L +L R ++ + A + G L ++ L ++
Sbjct: 947 QRKLKEPL-PNGKKKSTKLESLSDLERALTESKETASAMAT-LGEARLREMEAL----QS 1000
Query: 1692 LPVYLEKELKS-LRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPE---IYI 1747
L + E +L S L+ + C+C+K MI C C + +H CV + S + I++
Sbjct: 1001 LRLANEGKLLSPLQDVDIKICLCQKA-PAAPMIQCELCRDAFHTSCVAVPSISQGLRIWL 1059
Query: 1748 CAACK 1752
C C+
Sbjct: 1060 CPHCR 1064
Score = 71 (30.1 bits), Expect = 1.1e-98, Sum P(3) = 1.1e-98
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGL 1212
LE + L++ + +++ L E L +I WQ+ A LL +D +G GL
Sbjct: 1071 LEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGSGL 1128
Score = 65 (27.9 bits), Expect = 4.7e-100, Sum P(3) = 4.7e-100
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLY---SRASGLPICIVES 872
+ +P P L++ + AR +Q++ L A ++ L+ L +R +P+ +
Sbjct: 840 EEIPAYLPNGAALKDSVQRARDWLQDVEG-LQAGGRVPVLDTLIELVTRGRSIPVHLNSL 898
Query: 873 EKLSQRISSAKVWRD-SVRKCISNKCPAAIEIDVL 906
+L ++ + W++ +V ++ P ++ ++VL
Sbjct: 899 PRLETLVAEVQAWKECAVNTFLTENSPYSL-LEVL 932
Score = 63 (27.2 bits), Expect = 7.6e-100, Sum P(3) = 7.6e-100
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
++EL ++ LP + ++ L ++ + ++ +K +S + P+A E+ L +
Sbjct: 681 VNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSF 740
Query: 912 EALDLKI-DVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQ---ELGDFTVNM 967
E D+++ + E + L+ E + C + S++L + L+ L ++
Sbjct: 741 E-FDVELPQLAEMRIRLEQARWLEEVQQACLDP--SSLTLDDMRRLIDLGVGLAPYSAVE 797
Query: 968 PELELLKQYHSDAIFWIARLNDILV-----NINGRKDQHNVIDELNCILKEGASLRIQV 1021
+ L++ + + W + +L ++N I+E+ L GA+L+ V
Sbjct: 798 KAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSV 856
Score = 63 (27.2 bits), Expect = 8.5e-97, Sum P(3) = 8.5e-97
Identities = 20/86 (23%), Positives = 36/86 (41%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGL-LMNISPKDHYRQKLMELNRIGSQWADVAKKV 1670
W V + + T+ ++ + G+ L S + +L EL + W D AK +
Sbjct: 761 WLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSL 820
Query: 1671 VLDSGALSLDKVFELIAEGENLPVYL 1696
+ SL+ + + E E +P YL
Sbjct: 821 LKARPRHSLNSLATAVKEIEEIPAYL 846
Score = 62 (26.9 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 25/104 (24%), Positives = 47/104 (45%)
Query: 1618 KLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGAL 1677
KLL T P+ ++Q+ L ++ ++ L + ++W + ++ LD +L
Sbjct: 720 KLLSEET-PSAAELQDLLDVSFEFDVELPQLAEMRI-RLEQ--ARWLEEVQQACLDPSSL 775
Query: 1678 SLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKA 1721
+LD + LI G L Y E R + +L + +D+KA
Sbjct: 776 TLDDMRRLIDLGVGLAPYSAVEKAMARLQELL--TVSEHWDDKA 817
Score = 58 (25.5 bits), Expect = 3.2e-95, Sum P(3) = 3.2e-95
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+PLP + L++ ++ R+L + A SA + + E L A ++S +L
Sbjct: 952 EPLPNGKKKSTKLESLSDLERALTESKETA-SAMATLGEARLREMEA-------LQSLRL 1003
Query: 876 SQRISSAKVWRD-SVRKCISNKCPAAIEIDVLYKLESEALDLK-IDVPETDMLLKMIGQA 933
+ +D ++ C+ K PAA I +L +A + VP L+ I
Sbjct: 1004 ANEGKLLSPLQDVDIKICLCQKAPAAPMIQC--ELCRDAFHTSCVAVPSISQGLR-IWLC 1060
Query: 934 ESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
CR SE L+ + LL L V +PE + L+ + W R +L +
Sbjct: 1061 PHCRR--SE----KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
Query: 994 IN 995
N
Sbjct: 1115 GN 1116
Score = 55 (24.4 bits), Expect = 5.3e-99, Sum P(3) = 5.3e-99
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQD 1198
L + L+ V+Q L L + L+ ++N E +Q H+ LL +
Sbjct: 679 LTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSE 724
Score = 51 (23.0 bits), Expect = 3.6e-98, Sum P(3) = 3.6e-98
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 1679 LDKVFELIAEGENLPVYLEK--ELKSLRARSMLYCIC--------RKPYDEKAMIACYQC 1728
LD + EL+ G ++PV+L L++L A + C PY ++ C +C
Sbjct: 878 LDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTENSPYSLLEVL-CPRC 936
Query: 1729 D 1729
D
Sbjct: 937 D 937
Score = 45 (20.9 bits), Expect = 5.9e-96, Sum P(3) = 5.9e-96
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 1126 STAKSWLKNSELFLASAFAVAPASCSLLRLES--LKDLVSQSKFLKISLKEQTELEKVI 1182
S W N +L S F+ SC L S + +L+ +++ L++SL E EL + +
Sbjct: 1156 SLPDDW-DNRTSYLHSPFSTG-RSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTL 1212
Score = 41 (19.5 bits), Expect = 2.0e-101, Sum P(3) = 2.0e-101
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTS----VGDKNSLLGLLQKIKQSVHRSLYIYNK-- 1443
PE + + +++ NW+ R ++++ + V D+ GLL Q+ + NK
Sbjct: 1089 PEGDALRYMIERTVNWQHRAQQLLSSGNLKFVQDRVGS-GLLYSRWQASAGQVSDTNKVS 1147
Query: 1444 -PHGSVSMTL 1452
P G+ S +L
Sbjct: 1148 QPPGTTSFSL 1157
Score = 38 (18.4 bits), Expect = 3.2e-97, Sum P(3) = 3.2e-97
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1157 SLKDLVSQSKFLKISLKEQTELEKVINNC-ERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+L DL LK+ + E +N E N SL+ + L+++ ++ N
Sbjct: 579 TLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVS-FKALIEESEMKKFPDND 637
Query: 1216 LVSKIEQLITSMESAANC 1233
L+ + +L+T + A C
Sbjct: 638 LLRHL-RLVT--QDAEKC 652
Score = 38 (18.4 bits), Expect = 7.5e-96, Sum P(3) = 7.5e-96
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQS 1433
P + + + + W E + + K SL+ I++S
Sbjct: 585 PMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEES 628
Score = 37 (18.1 bits), Expect = 4.1e-95, Sum P(3) = 4.1e-95
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
++ + Q I V LP D ++ I +W ++ L+S
Sbjct: 1077 LLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSS 1114
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 828 (296.5 bits), Expect = 7.1e-106, Sum P(5) = 7.1e-106
Identities = 183/470 (38%), Positives = 258/470 (54%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFVPGKR 308
CE C +L+CD C++G+H YCL PPL H+P +W+C +CL + FGF G
Sbjct: 457 CETCGKSEDRSSILVCDSCDQGFHRYCLDPPLHHIPEFDWHCPKCLVGTGE-FGFEEGGV 515
Query: 309 YTVESFRRVADRAKKKRFRSGSA-----------SRVQMEKKFWEIVEGAAGNVEVMYGS 357
Y+++ F+ A+ KK F S S +E++FW +VE VEV YG+
Sbjct: 516 YSLKQFQEKANNFKKNYFASKMPFDPVLNTRRRESEDDVEREFWRLVESLTETVEVEYGA 575
Query: 358 DLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMV 417
D+ ++ +GSGFP +V+ N + Y PWNLNNLP S+ R + +I+G+ V
Sbjct: 576 DIHSTTHGSGFP--------TVERNPLDPYSKDPWNLNNLPFHGESLFRHIKSDISGMTV 627
Query: 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDA 477
PW+Y+GM FS FCWH EDH YS NY H+G K WY +PG++A AFE+ MR ++P+LF+
Sbjct: 628 PWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEAFEEAMRQAVPELFEG 687
Query: 478 QPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAP 537
QPDLLFQLVT++ P L + GV VY++ Q G FVITFP++YHAGFN G N EAVNFAP
Sbjct: 688 QPDLLFQLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHGFNFNEAVNFAP 747
Query: 538 ADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWR 597
DW P G G + Q + + SH+ELL A D + +L L R ++E R
Sbjct: 748 VDWEPFGAAGVERLQAFRRHPCFSHDELLFTAAARDTSISTAKWLAPALQRTCSRELAER 807
Query: 598 ERLWRK---------GIIK--STPMGPRKCPEYVGT----EEDPTCIICRQYLYLSAVAC 642
++ ++ S P G + + EED C C+ Y++L+ C
Sbjct: 808 ASFAKRHQEATPHNCALLTDDSAPTGECQLGFLIEDKDLPEEDYQCHYCKAYIFLTQFKC 867
Query: 643 RCRPAAFVCLEHWE-HLC--ECKTRKL----HLL-YRHTLAELYDLFLTV 684
+ +CL H + H C E ++KL H L YR + EL + L V
Sbjct: 868 H-KSGKTLCLVHLDAHDCCGEPLSKKLLGPDHTLRYRVSDTELKSMVLKV 916
Score = 181 (68.8 bits), Expect = 7.1e-106, Sum P(5) = 7.1e-106
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P + PTE+EF+DP YI KI E ++YGIC+I+PP++W+P FA+D F F T+ Q ++
Sbjct: 76 PTFRPTEEEFRDPEAYIRKIAPEGKKYGICRIIPPENWQPTFAIDTEKFHFKTRRQELNS 135
Query: 91 LQ 92
++
Sbjct: 136 VE 137
Score = 98 (39.6 bits), Expect = 7.1e-106, Sum P(5) = 7.1e-106
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 106 EYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNR 165
+ ++F K+H GT LN+ + LDL +L A + GG+++V K KKW E+ R + +
Sbjct: 172 QLAKFHKQH-GTNLNRFPSVDKRPLDLFRLKKAVEVRGGFEQVCKMKKWAEIGRDLGYSG 230
Query: 166 KI 167
KI
Sbjct: 231 KI 232
Score = 98 (39.6 bits), Expect = 7.1e-106, Sum P(5) = 7.1e-106
Identities = 49/198 (24%), Positives = 85/198 (42%)
Query: 783 IRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSL--IQ 840
++ + K + S +P + +K LD +L DP P + H +L + L +Q
Sbjct: 909 LKSMVLKVQERSRIPEAWGQK--LD---NILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQ 963
Query: 841 EINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC--ISNKCP 898
E+ A + C K E Y + K R + K WR + K + +
Sbjct: 964 ELAAFVQRCDKWVEEATNYI-----------TRKQQNRRKNEKAWRKTTSKASQLEERDR 1012
Query: 899 AAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRG--SMSLKTVELL 956
++ +Y L +EA L D P+ L + + E R S AL + S++ VE L
Sbjct: 1013 EVRRVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALANPHTRSIQEVEEL 1072
Query: 957 LQELGDFTVNMPELELLK 974
++ +F V++PE+E L+
Sbjct: 1073 VENSRNFNVDLPEVEDLE 1090
Score = 86 (35.3 bits), Expect = 7.1e-106, Sum P(5) = 7.1e-106
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1705 ARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAP----EIYICAAC 1751
A+ ++CICR + MI C C EWYH C+K+ + Y C C
Sbjct: 1318 AKRDVFCICRHS-EAGMMIECEICGEWYHGKCLKIARGKVKECDKYTCPIC 1367
Score = 74 (31.1 bits), Expect = 1.3e-104, Sum P(5) = 1.3e-104
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500
C+C S++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1324 CICRHSEAGMM--IECEICGEWYHGKCLKIARGKVKECDKYTCPICDW 1369
Score = 71 (30.1 bits), Expect = 4.7e-103, Sum P(5) = 4.7e-103
Identities = 67/381 (17%), Positives = 153/381 (40%)
Query: 1084 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLAS 1141
W ++ +IL K Q+ +++ + I LP L E+ + W++ + ++
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHLPGLQELAAFVQRCDKWVEEATNYITR 985
Query: 1142 AFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQ-----TELEKVINNCERWQNHASSLL 1196
+ R + K + + ++ E E +K+ +C + + L
Sbjct: 986 KQQNRRKNEKAWRKTTSKASQLEERDREVRRVENIYALLAEADKLSFDCPQM-----AAL 1040
Query: 1197 QDARCLLDKD--DIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTL 1254
++ ++K D+ L+N I+++ +E++ N + D E+ +L++ +
Sbjct: 1041 EEKTREIEKFRLDVSAALANPHTRSIQEVEELVENSRNFNV----DLPEVEDLEHIVRQM 1096
Query: 1255 HWCKKALSFLSVSPSLEDVESLMAVAE--GLSTRCFSSMLWNSLI-HGVKWLKRALEVIS 1311
W + A +L+D + L+ E GLS + L HG W +A E++S
Sbjct: 1097 KWNEDAGRRRGQYLTLKDCQELILAGEQLGLSEANEHLAHFKDLCRHGEAWEAKAKELMS 1156
Query: 1312 APCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFFNLK----- 1366
+ +E + A + S P + + + + K + Q+++ +
Sbjct: 1157 V----EAVHYQQLEALSAQANRVPVS-PETLAAVDAILTKQREAQKRIQSLYERSKDPDY 1211
Query: 1367 ----CAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNS 1422
++ LM L+EL +LE+ + + E+W ++ K++ G + N+
Sbjct: 1212 KKRPLYKEVRELMESLEELNSRPT-GAIDLER---EQKRHEDWMRKGKKLFGKA----NA 1263
Query: 1423 LLGLLQKIKQSVH-RSLYIYN 1442
L +L+ + V R+ Y ++
Sbjct: 1264 PLHILKSHMEYVEKRNFYCFD 1284
Score = 62 (26.9 bits), Expect = 3.2e-19, Sum P(5) = 3.2e-19
Identities = 16/61 (26%), Positives = 22/61 (36%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYI--CPYCQYFESESVSQFG 1510
C C L+C +C +H CL P +H + CP C E + G
Sbjct: 457 CETCGKSEDRSSILVCDSCDQGFHRYCLDPP---LHHIPEFDWHCPKCLVGTGEFGFEEG 513
Query: 1511 G 1511
G
Sbjct: 514 G 514
Score = 60 (26.2 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPEI-YICAAC 1751
C K D +++ C CD+ +H C+ L PE + C C
Sbjct: 460 CGKSEDRSSILVCDSCDQGFHRYCLDPPLHHIPEFDWHCPKC 501
Score = 59 (25.8 bits), Expect = 8.3e-102, Sum P(5) = 8.3e-102
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 1652 KLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
K+ E +RI W ++ D L + L+ EGE +P +L
Sbjct: 915 KVQERSRIPEAWGQKLDNILEDDPKPQLKVLHNLLNEGEKIPYHL 959
Score = 52 (23.4 bits), Expect = 8.0e-97, Sum P(4) = 8.0e-97
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 847 SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVL 906
+A K+ +L+ S LP E + L + I+ A +R+ +++ + C E+ L
Sbjct: 1377 AARPKLEDLQEWQSEIPSLPFQPDEEQILERIINQATAFREFLQRYTNTACTTTEEVPTL 1436
Query: 907 --YKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLK 951
Y + E ++ + ET++ + I + + L S+S +
Sbjct: 1437 VFYLRKIEGAEVLLAY-ETNLFRQEIHKWQPVAPEPPPILEQSLSTR 1482
Score = 48 (22.0 bits), Expect = 1.2e-100, Sum P(5) = 1.2e-100
Identities = 31/147 (21%), Positives = 63/147 (42%)
Query: 851 KISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLE 910
++ + L + A L + L ++ + +R V ++N P I + +L
Sbjct: 1016 RVENIYALLAEADKLSFDCPQMAALEEKTREIEKFRLDVSAALAN--PHTRSIQEVEELV 1073
Query: 911 SEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGS-MSLKTV-ELLL--QELGDFTVN 966
+ + +D+PE + L ++ Q + + RG ++LK EL+L ++LG N
Sbjct: 1074 ENSRNFNVDLPEVEDLEHIVRQMKWNED--AGRRRGQYLTLKDCQELILAGEQLGLSEAN 1131
Query: 967 MPELELLKQY--HSDAIFWIARLNDIL 991
L K H +A W A+ +++
Sbjct: 1132 -EHLAHFKDLCRHGEA--WEAKAKELM 1155
Score = 46 (21.3 bits), Expect = 1.9e-100, Sum P(5) = 1.9e-100
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEG 1638
W ++ +LE KP + + N L EG
Sbjct: 926 WGQKLDNILEDDPKPQLKVLHNLLNEG 952
Score = 45 (20.9 bits), Expect = 5.3e-12, Sum P(4) = 5.3e-12
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCL 276
IC ++G+ M+ C+ C + +H CL
Sbjct: 1325 ICRHSEAGM----MIECEICGEWYHGKCL 1349
Score = 43 (20.2 bits), Expect = 2.2e-101, Sum P(5) = 2.2e-101
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1147 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVIN 1183
P + +LE L++ S+ L E+ LE++IN
Sbjct: 1374 PRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERIIN 1410
Score = 40 (19.1 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 883 KVWRDSVRKCISNKCP------------AAIEIDVLYKLESEALDLKIDVPETDMLLKMI 930
K+ R V++C CP A +++ L + +SE L E +L ++I
Sbjct: 1350 KIARGKVKECDKYTCPICDWRQKIPRDAARPKLEDLQEWQSEIPSLPFQPDEEQILERII 1409
Query: 931 GQAESCR 937
QA + R
Sbjct: 1410 NQATAFR 1416
Score = 40 (19.1 bits), Expect = 2.2e-16, Sum P(6) = 2.2e-16
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 1215 SLVSKIEQLITSMESAANCGLSLGFDFHE 1243
+L + Q + + A + G + GF+F+E
Sbjct: 713 ALDQRAGQFVITFPQAYHAGFNHGFNFNE 741
Score = 40 (19.1 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 359 LDTSIYGSG-FPRVCDHRPESVDANVWNEYCNSPWNLNNL 397
L +S++ + R P +D + N + +SP NL+++
Sbjct: 1608 LPSSLFSPPRYSRTATGGPSGIDIDHSNPFGSSPRNLDDV 1647
Score = 38 (18.4 bits), Expect = 5.0e-18, Sum P(5) = 5.0e-18
Identities = 5/12 (41%), Positives = 9/12 (75%)
Query: 791 ENWSSLPGSDSE 802
+ W +PG+D+E
Sbjct: 660 KTWYGIPGADAE 671
Score = 38 (18.4 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 263 LCDRCNKGWHVYCLSPPLKHVPRGNWYCLE 292
L + N H+ L +++V + N+YC +
Sbjct: 1257 LFGKANAPLHI--LKSHMEYVEKRNFYCFD 1284
Score = 37 (18.1 bits), Expect = 1.7e-15, Sum P(4) = 1.7e-15
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 766 VRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGS 799
VR ++ + ++WAE RD + + SSL S
Sbjct: 206 VRGGFEQVCKMKKWAEIGRDLGYSGKIMSSLSTS 239
Score = 37 (18.1 bits), Expect = 8.8e-12, Sum P(3) = 8.8e-12
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 1776 PKTPSPKHT 1784
P TPSP H+
Sbjct: 273 PYTPSPNHS 281
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 921 (329.3 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 244/739 (33%), Positives = 369/739 (49%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
+C C G + +LLCD C+ +H++CL PPL +P+G W C +C+ ++ ++FGF
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGF 344
Query: 304 VPGKR-YTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
R YT++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 345 EQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIH 404
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWL 420
+ +GSGFP V D + EY S WNLN +P L+ S+L ++ +I+G+ VPWL
Sbjct: 405 SKEFGSGFP-VSDSKRHLTPEE--EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 421 YLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPD 480
Y+GM+FSAFCWH EDH YS+NY HWG+PK WY VP A E+VM+ P+LFD+QPD
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 521
Query: 481 LLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADW 540
LL QLVT++NP+ L+ +GVPV Q G FVITFPR+YH+GFN G N AEAVNF ADW
Sbjct: 522 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 581
Query: 541 LPHGGFGADLYQQYHKAAVLSHEELLCVVAK--SDLDSKVSPYLKRELLRVYTKERMWRE 598
LP G + Y++ + V SHEEL+C +A LD ++ + +E+ + +ER R+
Sbjct: 582 LPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRK 641
Query: 599 RLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHL 658
L KG+ ++ G + P+ V CI C +SA C +P F+ + H L
Sbjct: 642 ALLEKGLSEAKRQGLKTEPKDVRL-----CINCVTTEMMSANPCFVKPFVFILISHXNGL 696
Query: 659 CECKTRKLHLLYRHTLAELYDLF--LTVDRXXXXXXXXXXXLRRQISSSNRPT-----TL 711
C+C + + +L R+TL EL + L V + ++ + + L
Sbjct: 697 CKCSSSRQYLRSRYTLDELPAMLHKLKVRAESFDTWATKVRVALEVEDGRKRSLEELRAL 756
Query: 712 TKKVKGVRVTMSQLVEQWLSCSLKVLQGLFSSDAYGTLL-REAEQFLWAGFEMDA--VRD 768
+ + R S+L+++ +C L + S A G + +EA AG +M ++D
Sbjct: 757 ESEARERRFPNSELLQRLKNC-LSEAEACVSR-ALGLVSGQEAGPDRVAGVQMTLAELQD 814
Query: 769 MV---NKLIEGRRWAEGIRDCLHKAENWSS-----LPGSDSEKVRLDCVNELLGFDPLPC 820
+ N L ++ L + E + + L S L + E G L
Sbjct: 815 FLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLER-G-QQLGV 872
Query: 821 NEPGHLILQNYAEEARSLIQEINAALSACSKISELE----LLYSRASGLPICIVESEK-- 874
P LQ E+AR L E+ L+ ++ L LL + AS P V+ +
Sbjct: 873 EVPEAQQLQRQVEQARWL-DEVKRTLAPSARRGTLAIMRGLLVAGASVAPSPAVDKAQAE 931
Query: 875 LSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAE 934
L + ++ A+ W + C+ + PA +LY + +LK M ++G
Sbjct: 932 LQELLTIAERWEEKAHLCLEARSPALSLPAILY-FQILMENLK------KMAWVVLGIPP 984
Query: 935 SCRARCSEALRGSMSLKTV 953
CR C RG + L V
Sbjct: 985 LCRYICIHRSRGRLILVCV 1003
Score = 176 (67.0 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRIQRLNE 74
Query: 91 LQ 92
L+
Sbjct: 75 LE 76
Score = 103 (41.3 bits), Expect = 4.7e-15, Sum P(4) = 4.7e-15
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 838 LIQEINAALSACSKISELELLYSRAS--GLPICIVESEKLSQRISSAKVWRDSVRKCISN 895
LI N L CS S + L SR + LP + KL R S W VR +
Sbjct: 689 LISHXNG-LCKCS--SSRQYLRSRYTLDELPAML---HKLKVRAESFDTWATKVRVALEV 742
Query: 896 KCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IGQAESCRARCSEALRGSMS--- 949
+ ++ L LESEA + + P +++L ++ + +AE+C +R + G +
Sbjct: 743 EDGRKRSLEELRALESEARERRF--PNSELLQRLKNCLSEAEACVSRALGLVSGQEAGPD 800
Query: 950 -LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNIN-GRKDQHNVIDEL 1007
+ V++ L EL DF M L D + ++ Q + L
Sbjct: 801 RVAGVQMTLAELQDFLGQMNNLPCAMHQIGDVKGILEQVEAYQTEAREALVSQPSSPGLL 860
Query: 1008 NCILKEGASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQ--VTAEAVI 1062
+L+ G L ++V + ++ ++++A + + L + L +R V +V
Sbjct: 861 QSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAIMRGLLVAGASVA 920
Query: 1063 LQIEREKLFIDLSGVLAAAMRWEERA 1088
+K +L +L A RWEE+A
Sbjct: 921 PSPAVDKAQAELQELLTIAERWEEKA 946
Score = 80 (33.2 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQ- 1508
+C C ++ + L+C C D YH+ CL P E+ + + CP C E + +
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKG---VWRCPKCVMAECKRPPEA 341
Query: 1509 FG 1510
FG
Sbjct: 342 FG 343
Score = 77 (32.2 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
Identities = 27/127 (21%), Positives = 58/127 (45%)
Query: 1073 DLSGVLAAAMRWEERAADILIHKAQMCEF-EDIIRASQDIFVVLPSLDEVQNEISTAKSW 1131
D+ G+L ++ A + L+ + + ++ Q + V +P ++Q ++ A+ W
Sbjct: 831 DVKGILEQVEAYQTEAREALVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-W 889
Query: 1132 LKNSELFLASAFAVAPASCSLLR-LESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 1190
L + LA + + +++R L V+ S + K Q EL++++ ERW+
Sbjct: 890 LDEVKRTLAPS--ARRGTLAIMRGLLVAGASVAPSPAVD---KAQAELQELLTIAERWEE 944
Query: 1191 HASSLLQ 1197
A L+
Sbjct: 945 KAHLCLE 951
Score = 68 (29.0 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 25/122 (20%), Positives = 56/122 (45%)
Query: 1410 KEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1469
++IV G++ G+LQ + + + + + S + ++C+C + + + L C
Sbjct: 1084 RQIVAFKEGEQKEKEGILQLRRTNSAKPSPLASLTTNSSTASICVCGQVPAG-VGALQCD 1142
Query: 1470 ACKDCYHLQCLR-PTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIE 1528
C+D +H +C+ P + + P ++E ++ +F PL +R L ++
Sbjct: 1143 LCQDWFHGRCVTVPRLLSSQRSSLTSSPLLAWWEWDT--KFL-CPLCMRSRRPRLETILA 1199
Query: 1529 LL 1530
LL
Sbjct: 1200 LL 1201
Score = 61 (26.5 bits), Expect = 8.1e-08, Sum P(4) = 8.1e-08
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQAEESSTPQ 1762
+C + ++ ++ C CD+ YHI C+ L PEI + C C AE P+
Sbjct: 288 MCSRGDEDDKLLLCDGCDDNYHIFCL-LPPLPEIPKGVWRCPKCV-MAECKRPPE 340
Score = 56 (24.8 bits), Expect = 2.3e-10, Sum P(4) = 2.3e-10
Identities = 39/186 (20%), Positives = 75/186 (40%)
Query: 1256 WCKKALSFLSVSPSLE-DVESLMAVAEGLSTRCF--SSMLW---NSLIHGVKWLKRALEV 1309
W K L V + +E L A+ R F S +L N L + RAL +
Sbjct: 732 WATKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGL 791
Query: 1310 ISA----PCKFK--RCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQFF 1363
+S P + + L+++++ L + + IG++ +++ + +Q + +
Sbjct: 792 VSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQ-IGDVKGILEQVEAYQTEAREA- 849
Query: 1364 NLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSV--GDKN 1421
L S L+ L E G+ + PE +++ +V++ W K + S G
Sbjct: 850 -LVSQPSSPGLLQSLLERGQQLGVEVPEAQQLQRQVEQAR-WLDEVKRTLAPSARRGTLA 907
Query: 1422 SLLGLL 1427
+ GLL
Sbjct: 908 IMRGLL 913
Score = 55 (24.4 bits), Expect = 5.0e-103, Sum P(4) = 5.0e-103
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1711 CICRKPYDEKAMIACYQCDEWYHIDCV---KLLSA 1742
C+C + + C C +W+H CV +LLS+
Sbjct: 1127 CVCGQVPAGVGALQCDLCQDWFHGRCVTVPRLLSS 1161
Score = 54 (24.1 bits), Expect = 6.4e-103, Sum P(4) = 6.4e-103
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVN 993
L+T+ LL L V +PE E L+ AI W R +L +
Sbjct: 1194 LETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLAS 1237
Score = 50 (22.7 bits), Expect = 1.7e-102, Sum P(4) = 1.7e-102
Identities = 13/60 (21%), Positives = 32/60 (53%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGSVS 1449
PE E + ++ +W+ R ++++ + + +LLG L +++Q + +KP S++
Sbjct: 1212 PEGEALQCLTERAISWQGRARQVLASE--EVTALLGRLAELRQRLQAE----SKPEESLA 1265
Score = 49 (22.3 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 24/108 (22%), Positives = 48/108 (44%)
Query: 1118 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS--LLRLESLKDLVSQSKFLKISLKEQ 1175
L ++N +S A++ + + L L S P + + L L+D + Q L ++ +
Sbjct: 771 LQRLKNCLSEAEACVSRA-LGLVSGQEAGPDRVAGVQMTLAELQDFLGQMNNLPCAMHQI 829
Query: 1176 TELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVSKIEQL 1223
+++ ++ E +Q +AR L GL SL+ + +QL
Sbjct: 830 GDVKGILEQVEAYQT-------EAREALVSQPSSPGLLQSLLERGQQL 870
Score = 48 (22.0 bits), Expect = 2.2e-104, Sum P(4) = 2.2e-104
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 143 GGYDKVVKEKKWGEV 157
GGY+ + K+++W V
Sbjct: 82 GGYETICKDRRWARV 96
Score = 47 (21.6 bits), Expect = 4.1e-08, Sum P(4) = 4.1e-08
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP 279
+C Q +G+ L CD C +H C++ P
Sbjct: 1128 VCGQVPAGVGA---LQCDLCQDWFHGRCVTVP 1156
Score = 44 (20.5 bits), Expect = 7.2e-102, Sum P(4) = 7.2e-102
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLL--QDARCLLDK 1205
RLE++ L+ + L + L E L+ + WQ A +L ++ LL +
Sbjct: 1193 RLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQVLASEEVTALLGR 1246
Score = 41 (19.5 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 1227 MESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDVESLMAVAEGL 1283
++S G LG + E +LQ W + L+ PS +A+ GL
Sbjct: 860 LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLA--PSAR--RGTLAIMRGL 912
Score = 37 (18.1 bits), Expect = 8.1e-08, Sum P(4) = 8.1e-08
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSD 1522
R+H E + PY Y ++ Q P F + D
Sbjct: 113 RSHYERIVYPYEMYQSGANLVQCNTRP--FDNEEKD 146
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 758 (271.9 bits), Expect = 1.2e-102, Sum P(5) = 1.2e-102
Identities = 168/439 (38%), Positives = 231/439 (52%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFVPGKR 308
C C G +++C+ C+ G+H CL PPLK P W C CL D FGF G
Sbjct: 463 CHLCARGKETGFIVVCESCDYGYHGMCLDPPLKTKPDTEWNCPRCLVGD-GRFGFEEGGL 521
Query: 309 YTVESFRRVADRAKKKRFRSGSASRVQM-----------EKKFWEIVEGAAGNVEVMYGS 357
Y+++ F+ A K+ F Q+ E++FW +V VEV YG+
Sbjct: 522 YSLKQFQERAADFKQSYFEKKMPVDPQLNCHRPVTEDDVEREFWRLVSSIEETVEVEYGA 581
Query: 358 DLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMV 417
D+ + +GSGFP + P+ + Y PWNLN LP S+ R + +I+G+ V
Sbjct: 582 DIHCTTHGSGFP-TAEKNPD-------DPYSTDPWNLNILPLHPESLFRYIKSDISGMTV 633
Query: 418 PWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDA 477
PW+Y+GM+FS FCWH EDH YS NY H+G K WY +PG +A FE MR ++P+LF
Sbjct: 634 PWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEKFEAAMREAIPELFAT 693
Query: 478 QPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAP 537
QPDLLFQLVT+L P L + GV VY++ Q G FVITFP++YHAGFN G N EAVNFAP
Sbjct: 694 QPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGFNHGFNFNEAVNFAP 753
Query: 538 ADWLPHGGFGADLYQQYHKAAVLSHEELLCV----VAKSDLDSKVSPYLKRELLRVYTKE 593
+DW P G G + QQ+ + SH+ELL +A L + + +L L R++++E
Sbjct: 754 SDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTAKWLAPALERIHSRE 813
Query: 594 RMWRERLWRK------------GIIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVA 641
R+ K G S+ + K + EE+ C C+ Y YLS
Sbjct: 814 LAQRQAFVTKHKDLAQHSCAITGGEDSSCLLSFKVEDEDVPEEEYQCGYCKVYTYLSRFK 873
Query: 642 CRCRPAAFVCLEH-WEHLC 659
C + +CL H H C
Sbjct: 874 C-LKSGQVLCLLHAGHHAC 891
Score = 266 (98.7 bits), Expect = 1.2e-102, Sum P(5) = 1.2e-102
Identities = 54/137 (39%), Positives = 83/137 (60%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P YYPT +EFK+P+ Y+ KI EA +YGICKIVPP +W PPFA+D F F T+ Q ++
Sbjct: 96 PTYYPTAEEFKEPMAYMRKIAPEARKYGICKIVPPDTWNPPFAIDTQKFHFRTRKQELNS 155
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
++ + + + +F ++ G ++ + + + + LDL KL A + GG+DKV K
Sbjct: 156 VEGSTRV--NMNYVDALVKFHNQN-GKEI-RLPYVDKKPLDLYKLKKAVENRGGFDKVCK 211
Query: 151 EKKWGEVFRFVRSNRKI 167
KKW E+ R + + KI
Sbjct: 212 SKKWAEIGRDLGYSGKI 228
Score = 109 (43.4 bits), Expect = 1.3e-99, Sum P(6) = 1.3e-99
Identities = 76/360 (21%), Positives = 153/360 (42%)
Query: 1084 WEERAADILIHKA--QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLA- 1140
WEE+ IL +A + +++ + I LPSL ++ + W++++ + A
Sbjct: 933 WEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWVEDAANYTAR 992
Query: 1141 ---------SAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 1191
++ + S ++ +++ S S K+ TE E++ +C
Sbjct: 993 KQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKL----MTEAEQLGFDCPE---- 1044
Query: 1192 ASSLLQDARCL-LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNA 1250
S L + A + + +++ L +S S Q I ++E G S D E+ +L +
Sbjct: 1045 ISQLQERAEAIKVFQENAQRVLEHSSTST--QSIDTVEELLEEGHSFNVDIPEVEKLSHV 1102
Query: 1251 CSTLHWCKKALSFLSVSPSLEDVESLMAVAEGLSTRCFSSML--WNSLIH-GVKWLKRAL 1307
L W +KA SL +V+ L+ L R ++ + +N ++ G +W ++A
Sbjct: 1103 LDQLKWSQKARQKRGTFISLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQ 1162
Query: 1308 EVISAPCKFKRCKLSDVEEVLAGCKGINFSFPV---VIGELTSAIQKHKLWQEQVHQFFN 1364
E+I+A +L E L+ +N + PV + E+ + K + Q+ Q N
Sbjct: 1163 EIINADA-IHYAQL----EALSQQATVN-ALPVSQATLAEVDRILFKQREALGQI-QDLN 1215
Query: 1365 LKCAQ----------QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVG 1414
+C + +M +++EL + PELEK + + E+W ++ K++ G
Sbjct: 1216 ARCRNADHRKRPMYAEVCEIMKKVEEL-QHKPNGTPELEK---EQRRHEDWMRKGKKLFG 1271
Score = 103 (41.3 bits), Expect = 1.2e-102, Sum P(5) = 1.2e-102
Identities = 37/119 (31%), Positives = 53/119 (44%)
Query: 872 SEKLSQRISSAKVWRDSVRKCISNKCPAAIEI-DV--LYKLESEALDLKIDVPETDMLLK 928
+ K R + K WR S+ K + P E+ V +YKL +EA L D PE L +
Sbjct: 991 ARKQQNRRKTDKSWRASIGKASDIQEPKDREVRSVSHMYKLMTEAEQLGFDCPEISQLQE 1050
Query: 929 MIGQAESCRARCSEALRGS----MSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFW 983
+ + L S S+ TVE LL+E F V++PE+E L D + W
Sbjct: 1051 RAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLEEGHSFNVDIPEVEKLSHV-LDQLKW 1108
Score = 95 (38.5 bits), Expect = 3.7e-98, Sum P(6) = 3.7e-98
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+S + L + A L E +L +R + KV++++ ++ + + + ID + +L
Sbjct: 1025 VSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSIDTVEELLE 1084
Query: 912 EALDLKIDVPETDMLLKMIGQAE-SCRARCSEALRGS-MSLKTVELLLQE 959
E +D+PE + L ++ Q + S +AR RG+ +SL V+ L++E
Sbjct: 1085 EGHSFNVDIPEVEKLSHVLDQLKWSQKARQK---RGTFISLNEVKELIEE 1131
Score = 92 (37.4 bits), Expect = 1.2e-102, Sum P(5) = 1.2e-102
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 1709 LYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK---PQAEESSTP 1761
++CICR+ + MI C C EWYH C+K+ + + Y C C P ++S P
Sbjct: 1332 VFCICRRT-EAGMMIECELCHEWYHGKCLKVARGKIREDDKYTCPICDWRVPIPRDASRP 1390
Query: 1762 QNVD 1765
D
Sbjct: 1391 NLED 1394
Score = 73 (30.8 bits), Expect = 1.8e-96, Sum P(7) = 1.8e-96
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 930 IGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLND 989
IG+A + +R S+ + L+ E + PE+ L++ ++AI
Sbjct: 1008 IGKASDIQEPKDREVR---SVSHMYKLMTEAEQLGFDCPEISQLQE-RAEAIKVFQENAQ 1063
Query: 990 ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDTKMP 1049
++ + Q ID + +L+EG S + + ++ + L + +KA + T +
Sbjct: 1064 RVLEHSSTSTQS--IDTVEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKARQKRGTFIS 1121
Query: 1050 LDFIRQVTAEAVILQIER-EKLFIDLSGVLAAAMRWEERAADIL----IHKAQM 1098
L+ ++++ E L I + + L A +WE +A +I+ IH AQ+
Sbjct: 1122 LNEVKELIEEGNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQL 1175
Score = 72 (30.4 bits), Expect = 3.9e-25, Sum P(4) = 3.9e-25
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 1437 SLYIYNKPHGSVSMTLCMCCESDSKELEFLI-CSACKDCYHLQCLRPTEVDRNHAEAYIC 1495
SL + K + S C C + KE F++ C +C YH CL P + E + C
Sbjct: 447 SLPRFPKDDSTPSPEKCHLC-ARGKETGFIVVCESCDYGYHGMCLDPPLKTKPDTE-WNC 504
Query: 1496 PYCQYFESESVSQFGG--SPLRFGGKRSDLRMLI---ELLSDSEFFC-RGIEAKDVLQE 1548
P C + + GG S +F + +D + ++ D + C R + DV +E
Sbjct: 505 PRCLVGDGRFGFEEGGLYSLKQFQERAADFKQSYFEKKMPVDPQLNCHRPVTEDDVERE 563
Score = 71 (30.1 bits), Expect = 1.3e-99, Sum P(6) = 1.3e-99
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500
C+C +++ + + C C + YH +CL+ + Y CP C +
Sbjct: 1334 CICRRTEAGMM--IECELCHEWYHGKCLKVARGKIREDDKYTCPICDW 1379
Score = 65 (27.9 bits), Expect = 2.6e-99, Sum P(5) = 2.6e-99
Identities = 34/128 (26%), Positives = 65/128 (50%)
Query: 1572 DKDLHVISNKLTITLKAREAAGVFDRQSNSAL-DFALARNLWRVRVSKLLEGLTKPT--I 1628
D+++ +S+ + +A E G FD S L + A A +++ ++LE + T I
Sbjct: 1019 DREVRSVSHMYKLMTEA-EQLG-FDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Query: 1629 GQIQNYLKEGLLMNISPKDHYRQKLME-LNRIGSQWADVAKKVVLDSGA-LSLDKVFELI 1686
++ L+EG N+ + +KL L+++ +W+ A++ G +SL++V ELI
Sbjct: 1077 DTVEELLEEGHSFNVDIPEV--EKLSHVLDQL--KWSQKARQ---KRGTFISLNEVKELI 1129
Query: 1687 AEGENLPV 1694
EG L +
Sbjct: 1130 EEGNRLGI 1137
Score = 65 (27.9 bits), Expect = 4.8e-95, Sum P(6) = 4.8e-95
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 749 LLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDC 808
L+ EAEQ GF+ + + + AE I+ A+ L S + +D
Sbjct: 1031 LMTEAEQL---GFDCPEISQLQER-------AEAIKVFQENAQR--VLEHSSTSTQSIDT 1078
Query: 809 VNELL----GFD-PLPCNEP-GHLILQ-NYAEEARSLIQEINAALSACSKISELELLYSR 861
V ELL F+ +P E H++ Q ++++AR Q+ +S ++E++ L
Sbjct: 1079 VEELLEEGHSFNVDIPEVEKLSHVLDQLKWSQKAR---QKRGTFIS----LNEVKELIEE 1131
Query: 862 ASGLPICIVESEKL--SQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDL-K 917
+ L I + + ++++ + W ++ I+ +++ L + + AL + +
Sbjct: 1132 GNRLGIRSYNDHMVHYNDQLNAGEQWERKAQEIINADAIHYAQLEALSQQATVNALPVSQ 1191
Query: 918 IDVPETDMLL----KMIGQAESCRARCSEA--LRGSMSLKTVELL--LQELGDFTVNMPE 969
+ E D +L + +GQ + ARC A + M + E++ ++EL PE
Sbjct: 1192 ATLAEVDRILFKQREALGQIQDLNARCRNADHRKRPMYAEVCEIMKKVEELQHKPNGTPE 1251
Query: 970 LELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLPLVEV 1029
LE ++ H D W+ + + N H + L +L+ + D P V
Sbjct: 1252 LEKEQRRHED---WMRKGKKLFGKTNA--PLHILKSHLEYVLERNSDCFDIGHDKPRVPA 1306
Query: 1030 E 1030
E
Sbjct: 1307 E 1307
Score = 59 (25.8 bits), Expect = 1.2e-95, Sum P(7) = 1.2e-95
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 1370 QSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSL 1423
+S S M +L E FDCPE+ ++ + + ++ +++ + ++ S S+
Sbjct: 1023 RSVSHMYKLMTEAEQLGFDCPEISQLQERAEAIKVFQENAQRVLEHSSTSTQSI 1076
Score = 54 (24.1 bits), Expect = 2.6e-99, Sum P(5) = 2.6e-99
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 949 SLKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQH 1001
SLK++ LL E N+P L +LK + W+ + N RK Q+
Sbjct: 948 SLKSLRNLLNEGEKIPFNLPSLAMLKTFVERCNRWV----EDAANYTARKQQN 996
Score = 52 (23.4 bits), Expect = 3.4e-97, Sum P(4) = 3.4e-97
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1589 REAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIGQIQNYLKEG 1638
R+A + D A W + K+L P++ ++N L EG
Sbjct: 910 RKAEDIIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEG 959
Score = 51 (23.0 bits), Expect = 4.4e-97, Sum P(4) = 4.4e-97
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 1651 QKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELIAEGENLPVYL 1696
+K+ + + W + K++ + SL + L+ EGE +P L
Sbjct: 921 KKVADKASVPEAWEEKYDKILSEEATPSLKSLRNLLNEGEKIPFNL 966
Score = 49 (22.3 bits), Expect = 1.1e-96, Sum P(6) = 1.1e-96
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1147 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNH 1191
P S LE L + L +E+ L+++I+N + ++NH
Sbjct: 1384 PRDASRPNLEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNH 1428
Score = 49 (22.3 bits), Expect = 1.4e-90, Sum P(5) = 1.4e-90
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDV----LY 907
+ +L Y GLP E L Q I +A+ +R+ + +N A E++ L
Sbjct: 1392 LEDLLSWYDEIPGLPFQPEEEGVLKQIIDNAQDFRNHIGPYCNNPMATASEVETQRFYLR 1451
Query: 908 KLE 910
KLE
Sbjct: 1452 KLE 1454
Score = 49 (22.3 bits), Expect = 1.6e-15, Sum P(4) = 1.6e-15
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPEI-YICAAC 1751
+C + + ++ C CD YH C+ L + P+ + C C
Sbjct: 465 LCARGKETGFIVVCESCDYGYHGMCLDPPLKTKPDTEWNCPRC 507
Score = 48 (22.0 bits), Expect = 1.2e-102, Sum P(5) = 1.2e-102
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 1627 TIGQIQNYLKEGLLMNI-SPKDHYRQKLMELNRIGSQWADVAKKVV 1671
++ +++ ++EG + I S DH +LN G QW A++++
Sbjct: 1121 SLNEVKELIEEGNRLGIRSYNDHMVHYNDQLNA-GEQWERKAQEII 1165
Score = 48 (22.0 bits), Expect = 1.8e-96, Sum P(7) = 1.8e-96
Identities = 18/87 (20%), Positives = 37/87 (42%)
Query: 857 LLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 916
+LY +A I +K++ + S + W + K +S + +++ L L +E +
Sbjct: 907 ILYRKAED--IIAATYKKVADKASVPEAWEEKYDKILSEEATPSLKS--LRNLLNEGEKI 962
Query: 917 KIDVPETDMLLKMIGQAESCRARCSEA 943
++P ML + E C +A
Sbjct: 963 PFNLPSLAMLKTFV---ERCNRWVEDA 986
Score = 48 (22.0 bits), Expect = 5.0e-15, Sum P(5) = 5.0e-15
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCL 276
IC + ++G+ M+ C+ C++ +H CL
Sbjct: 1335 ICRRTEAGM----MIECELCHEWYHGKCL 1359
Score = 45 (20.9 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 1487 RNHAEAYICPYCQYFESESVSQFGGSPLRFGG 1518
+N + ++CPY +Y + L +GG
Sbjct: 237 KNSYQKFLCPYEEYLRAARPGVHQQLELEYGG 268
Score = 44 (20.5 bits), Expect = 3.3e-23, Sum P(6) = 3.3e-23
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 791 ENWSSLPGSDSEKVRL---DCVNELLGFDP 817
+ W +PG D+EK + + EL P
Sbjct: 666 KTWYGIPGEDAEKFEAAMREAIPELFATQP 695
Score = 44 (20.5 bits), Expect = 5.4e-22, Sum P(5) = 5.4e-22
Identities = 47/218 (21%), Positives = 89/218 (40%)
Query: 1222 QLITSMESAANCGLSLGFDFHEISELQNACST---LHWCKKALSFLSVSPSLEDVESLMA 1278
Q + + A + G + GF+F+E + L ++ F P E L
Sbjct: 726 QFVITFPQAYHAGFNHGFNFNEAVNFAPSDWEPFGLAGVERLQQFRR-QPCFSHDELLWT 784
Query: 1279 VAEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKR----CKLSDVEE---VLAGC 1331
AEG+++ + I KWL ALE I + +R K D+ + + G
Sbjct: 785 AAEGIASGGLT-------IQTAKWLAPALERIHSRELAQRQAFVTKHKDLAQHSCAITGG 837
Query: 1332 KGIN--FSFPVVIGELTSAIQKHKLWQEQVHQFFN-LKCAQQSWSLMLQLKELGEAAAFD 1388
+ + SF V ++ ++++ +V+ + + KC + +L L G A D
Sbjct: 838 EDSSCLLSFKVEDEDVPE--EEYQCGYCKVYTYLSRFKCLKSGQ--VLCLLHAGHHACCD 893
Query: 1389 CPELEKVLSKVDKVENWKQRCKEIVGTS---VGDKNSL 1423
PE ++L D+ ++ ++I+ + V DK S+
Sbjct: 894 APEQNRLLG--DQHVILYRKAEDIIAATYKKVADKASV 929
Score = 40 (19.1 bits), Expect = 1.3e-99, Sum P(6) = 1.3e-99
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 1753 PQAEESSTPQNVDGGRTNAEFLEPKTP--SPK--HTN-SRKKLRKAEP 1795
P + + STP G T+ P P SP H L +A+P
Sbjct: 1575 PSSSQPSTPGLPMAGSTHGHASRPSEPGQSPSLVHRQPGESPLNRADP 1622
Score = 38 (18.4 bits), Expect = 1.3e-99, Sum P(6) = 1.3e-99
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 1508 QFGGSPLRFGGKRS 1521
Q GS RFGG RS
Sbjct: 1557 QTPGSAHRFGGDRS 1570
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 814 (291.6 bits), Expect = 5.8e-97, Sum P(3) = 5.8e-97
Identities = 175/415 (42%), Positives = 250/415 (60%)
Query: 295 NSDKDS-FGFVPGKRYTVESFRRVADRAKKKRFRS----GS-AS-------RVQ-MEKKF 340
+SD + FGF G +T+E F++ + K+ F+S GS AS +V+ +E ++
Sbjct: 162 SSDSEGKFGFQTGPDFTLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEY 221
Query: 341 WEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKL 400
W IVE A VEV YG+DL+T +GSGFP+ P S +A+ +++ C WNLNNL +L
Sbjct: 222 WRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPIS-EADQYSQ-CG--WNLNNLSRL 277
Query: 401 KGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEA 460
GS+L +I+GV+VPWLY+GM FS FCWH EDH YSMNY H GDPK WY +PG+ A
Sbjct: 278 PGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHA 337
Query: 461 GAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYH 520
+FE VM+ LPDLF+ QPDLL QLVT L+P +L E GVPVY +Q G F++TFP++YH
Sbjct: 338 ESFENVMKKRLPDLFEEQPDLLHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYH 397
Query: 521 AGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKS-------- 572
+GFN G NCAEAVN AP DWL HG + Y + + + LSH++LL A
Sbjct: 398 SGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWEL 457
Query: 573 DLDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGP-------RKCPEYVGTEED 625
L K +P + R RV +++ + + + ++ ++ + RK + +
Sbjct: 458 SLSKKKTPVIAR-WKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRE 516
Query: 626 PTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
C +C L++SA +C+C P F CL H + LC C+++ ++L RHTL EL+ L
Sbjct: 517 RECFLCFYDLHMSASSCKCSPNRFACLIHAKDLCSCESKDRYILIRHTLDELWAL 571
Score = 177 (67.4 bits), Expect = 5.8e-97, Sum P(3) = 5.8e-97
Identities = 50/138 (36%), Positives = 74/138 (53%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSF----TFPTKTQ 86
P++YPT ++F DPL YI K+R++AE YGIC+IVPP +W+PP L FPT+ Q
Sbjct: 57 PIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFPTRIQ 116
Query: 87 AIHQLQARSAACDS-KTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFG-- 143
I LQ R S KT + + R K +G K+ G + ++ +FG
Sbjct: 117 FIDLLQNREPIKKSTKTKKRKRRRISK--IGYTRRKRD--SGCDTASSGSSDSEGKFGFQ 172
Query: 144 -GYDKVVKE-KKWGEVFR 159
G D ++E +K+ E F+
Sbjct: 173 TGPDFTLEEFQKYDEYFK 190
Score = 43 (20.2 bits), Expect = 5.8e-97, Sum P(3) = 5.8e-97
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 1499 QYFESESVSQFGGSPLRFGGK 1519
+Y+ ++V FG P++ G K
Sbjct: 871 EYWNQKAVKLFGAEPIKEGEK 891
Score = 42 (19.8 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 25/116 (21%), Positives = 54/116 (46%)
Query: 1565 KFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLT 1624
K + C KD + +N+L+++++ + + ++ + A+ ++ RV K L L
Sbjct: 713 KVDGCLGGKDQNAATNRLSLSVELLSSGSLVVKKLWCSKQ-AIYPKGFKSRV-KFLSVLD 770
Query: 1625 KPTIGQIQNYLKE----GLL---MNISPKDHYRQKLMELNRIGSQWADVAKKVVLD 1673
PT + NY+ E GLL +S +D+ + ++ W V +++ L+
Sbjct: 771 -PT--NLTNYISEVLDAGLLGPLFRVSVEDYPTENFSNVSA-EKCWQMVTQRLKLE 822
Score = 39 (18.8 bits), Expect = 6.1e-07, Sum P(3) = 6.1e-07
Identities = 46/194 (23%), Positives = 75/194 (38%)
Query: 1339 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKEL---GEAAAFDCPELEKV 1395
P ++ +L + + L +E V + + Q+S +L + G F+C E V
Sbjct: 356 PDLLHQLVTQLSPRILKEEGVPVY---RAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNV 412
Query: 1396 LSKVD-------KVENW-KQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKPHGS 1447
+ VD VE + KQR K +S+ LLG + + L + K
Sbjct: 413 -APVDWLVHGQNAVEGYSKQRRK----SSLSHDKLLLGAAMEATYCLWE-LSLSKKKTPV 466
Query: 1448 VSMTLCMCCESD--SKELEFLICSACKDCYHLQ---CLRPTEVDRNHAEAYICPYCQYFE 1502
++ +C E +K ++ + + HLQ LR E D ++ C C Y
Sbjct: 467 IARWKRVCSEDGLLTKAVKKRVQMEEERLNHLQDGFSLRKMEGDFDNKRERECFLCFYDL 526
Query: 1503 SESVSQFGGSPLRF 1516
S S SP RF
Sbjct: 527 HMSASSCKCSPNRF 540
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 815 (292.0 bits), Expect = 9.4e-93, Sum P(3) = 9.4e-93
Identities = 174/424 (41%), Positives = 247/424 (58%)
Query: 296 SDKDSFGFVPGKRYTVESFRRVADRAKKKRFRSGSAS-----RVQ------------MEK 338
++ ++FGF PG +T++ F++ AD K + F+ S +V +E
Sbjct: 257 NELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEG 316
Query: 339 KFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCD-HRPESVDANVWNEYCNSPWNLNNL 397
++W IV+ A +EV+YG+DL+T ++GSGFP++ H S + ++Y S WNLNN
Sbjct: 317 EYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSE----DKYAKSGWNLNNF 372
Query: 398 PKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPG 457
P+L GS+L+ +I+GV+VPWLY+GM FS+FCWH EDH YS+NY HWG PK WY V G
Sbjct: 373 PRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGG 432
Query: 458 SEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPR 517
+A E+ MR LPDLF+ QPDLL +LVT L+PS L GVPV+ +Q G FV+TFPR
Sbjct: 433 KDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPR 492
Query: 518 SYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLC----VVAKSD 573
+YHAGFN G NCAEAVN AP DWLPHG +LY Q + +SH++LL V K+D
Sbjct: 493 AYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREVVKAD 552
Query: 574 ----------LDS-KVSPYLKRE-LLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVG 621
+D+ + + ++ +L K R+ ER R+ + S+ + + +
Sbjct: 553 WELNLLRKNTVDNLRWKAFSAKDGILAKTLKARIDMERTRREFLCNSS-LALKMHSNFDA 611
Query: 622 TEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLF 681
T E CI C L+LSA CRC P + CL H + LC C + L+R+ + EL L
Sbjct: 612 TNERECCI-CFFDLHLSAAGCRCSPEKYSCLTHVKELCSCPWVTKYFLFRYDIDELNVLV 670
Query: 682 LTVD 685
V+
Sbjct: 671 EAVE 674
Score = 196 (74.1 bits), Expect = 9.4e-93, Sum P(3) = 9.4e-93
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDL-----GSFTFPTKT 85
PV+YP+E+EF+D L YI KIR EAE+YGIC+IVPP SWKPP L GS F T+
Sbjct: 147 PVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGS-KFTTRV 205
Query: 86 QAIHQLQARSA 96
Q + +LQ RS+
Sbjct: 206 QRVDKLQNRSS 216
Score = 40 (19.1 bits), Expect = 9.4e-93, Sum P(3) = 9.4e-93
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 785 DCLHKAENWSSLPGSDSEKVRLD 807
D L N SLP +D + +R D
Sbjct: 868 DSLRDTRNTISLPTNDQKTMRRD 890
Score = 39 (18.8 bits), Expect = 1.2e-92, Sum P(3) = 1.2e-92
Identities = 21/89 (23%), Positives = 37/89 (41%)
Query: 873 EKLSQRISSAKVW-RDSVRKCISNKCPAA-IEIDVLYKLESEALDLKIDVPETDMLLKMI 930
E + ++SS W R + +S + +EID K+ + + D+ LK+
Sbjct: 671 EAVEGKLSSVYRWARQDLGLALSTDVSGSKMEIDEEGKVHKDPTPQTTALSGKDLQLKVT 730
Query: 931 GQAESCRARCSEALRGSMSLKTVELLLQE 959
+ S+ L + L V LLL+E
Sbjct: 731 SK------EVSKELEKTSKLSHVNLLLKE 753
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 781 (280.0 bits), Expect = 7.7e-92, Sum P(3) = 7.7e-92
Identities = 168/410 (40%), Positives = 227/410 (55%)
Query: 298 KDSFGFVPGKRYTVESFRRVADRAKKKRFR---SG------SASRVQMEKKFWEIVEGAA 348
++ FGF G +T++ F + A K F SG + S +E ++W IVE
Sbjct: 168 EEKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIVKWTPSVDDIEGEYWRIVEQPT 227
Query: 349 GNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMV 408
VEV YG+DL+ + GSGF + R E + +Y S WNLNNLP+L GS+L
Sbjct: 228 DEVEVYYGADLENGVLGSGFYK----RAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFE 283
Query: 409 HHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMR 468
+I+GV+VPWLY+GM FS+FCWH EDH YS+NYHH+G+PK WY VPGS A A EK MR
Sbjct: 284 DCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMR 343
Query: 469 SSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLN 528
LPDLF+ QPDLL LVT +PS+L + GV Y V+Q G +V+TFPR+YHAGFN G N
Sbjct: 344 KHLPDLFEEQPDLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFN 403
Query: 529 CAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLR 588
CAEAVN AP DWL HG +LY + + LSH++LL A + K L +
Sbjct: 404 CAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYEAV--KALWELSASEGK 461
Query: 589 VYTKERMWRERLWRKGIIKS-------------TPMGP-----RKCPEYVGTEEDPTCII 630
T W+ + G + + T +G +K + + + C
Sbjct: 462 ENTTNLRWKSFCGKNGTLTNAIQARLQMEEGRITALGRDSSSLKKMEKDFDSNCERECFS 521
Query: 631 CRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
C L+LSA C+C P + CL+H + LC C + +L R+T+ EL L
Sbjct: 522 CFYDLHLSASGCKCSPEEYACLKHADDLCSCDVKDGFILLRYTMDELSSL 571
Score = 167 (63.8 bits), Expect = 7.7e-92, Sum P(3) = 7.7e-92
Identities = 35/68 (51%), Positives = 43/68 (63%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSF----TFPTKTQ 86
PV+ P+ +EF DPL YI KIR AE YGIC+I+PP +WKPP L S FPT+ Q
Sbjct: 60 PVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQ 119
Query: 87 AIHQLQAR 94
+ LQ R
Sbjct: 120 TVDLLQNR 127
Score = 45 (20.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 1715 KPYDEKAMIACYQCDEWYHIDCVKLLSAPEIYIC 1748
K +D C+ C H+ +PE Y C
Sbjct: 509 KDFDSNCERECFSCFYDLHLSASGCKCSPEEYAC 542
Score = 44 (20.5 bits), Expect = 6.3e-79, Sum P(3) = 6.3e-79
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 237 HKVDKEDELDQICEQCKSGLHGEVM 261
H DK+ + D I EQ S H +V+
Sbjct: 19 HPPDKDKDKDTIMEQPSSPRHRKVV 43
Score = 38 (18.4 bits), Expect = 7.7e-92, Sum P(3) = 7.7e-92
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1407 QRCKEIVGTSVGDKNSLLGL 1426
Q+C E+V V D ++ LGL
Sbjct: 727 QQCWEMVMRRVKDTSTSLGL 746
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 734 (263.4 bits), Expect = 3.4e-90, Sum P(4) = 3.4e-90
Identities = 145/351 (41%), Positives = 211/351 (60%)
Query: 295 NSDKDSFGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVM 354
+ K FGF G Y++E F +A KK F G+ +E +FW IVE NV+V
Sbjct: 638 DDSKQEFGFYEGNTYSLEEFEILAANFSKKWFPDGNNDPNTVENEFWRIVENGDENVQVH 697
Query: 355 YGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITG 414
YGSDLD + +GSGF R + +P NE+ WNLN +PK++ S+ + I G
Sbjct: 698 YGSDLDVTTHGSGFSRTTNTQP--------NEH----WNLNQMPKMEESLFSHLTETIAG 745
Query: 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDL 474
V P +Y+GMLFS+FCWH ED+ YS+NY H G K WY VPGS + FEKVM++ +P+L
Sbjct: 746 VTDPMMYVGMLFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSCSDQFEKVMKNLVPEL 805
Query: 475 FDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVN 534
F+ QP+LL+ L+TM++P V VP+Y LQ PG +VITFP++YHAGF+ G AEAVN
Sbjct: 806 FEKQPNLLYLLITMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHGFTIAEAVN 865
Query: 535 FAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKER 594
FAP DW+P G + YQ+ H+++V SH++LL +A S +S +L +E ++ +KE
Sbjct: 866 FAPPDWIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSSDLSVWLSKEFQKIKSKEN 925
Query: 595 MWRERLWRKG---IIKSTPMGPRKCPEYVGTEEDPTCIICRQYLYLSAVAC 642
R +L ++ II+ + +K + + E C +C+ +LS + C
Sbjct: 926 SLRNQLLKRNPTLIIEKS----QKSTQEILNNEPLQCFVCKYDCFLSFIQC 972
Score = 245 (91.3 bits), Expect = 3.4e-90, Sum P(4) = 3.4e-90
Identities = 58/146 (39%), Positives = 80/146 (54%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPP-KSWKPPFALDLGSFTFPTKTQAIH 89
PV+YPT +EFK PL YI IR AE+YGICKIVPP KS +D F F TK Q IH
Sbjct: 272 PVFYPTIEEFKSPLRYIESIRPIAEKYGICKIVPPFKSDSITKNIDPKKFKFKTKVQNIH 331
Query: 90 QLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVV 149
QL+ R ++ F + FL + T L ++G +LD LF R+GG ++
Sbjct: 332 QLKRRWNG-PNELFVSDLCEFLDKKTNTPLESLPKYDGRDLDFYTLFLEVNRWGGCNECT 390
Query: 150 KEKKWGEVFRFVRSNRKISD-CARHV 174
KW EV + + K++D C++ +
Sbjct: 391 HSSKWNEVIKVL----KVTDFCSKPI 412
Score = 60 (26.2 bits), Expect = 3.4e-90, Sum P(4) = 3.4e-90
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 651 CLEHWEHLCECKTRKL 666
CL H+E LC+C +KL
Sbjct: 1037 CLSHFEDLCDCNKKKL 1052
Score = 44 (20.5 bits), Expect = 3.3e-69, Sum P(4) = 3.3e-69
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 82 PTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEE 129
PTK + + + + +KT R K V ++ K++ E EE
Sbjct: 548 PTKGVVLRKKELKKPIIQNKTITTPKKRGRKRKVQQEIKKEIEEEEEE 595
Score = 42 (19.8 bits), Expect = 3.4e-90, Sum P(4) = 3.4e-90
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 1387 FDCPELEKVLSKVDKVENWKQR 1408
F +L+K +S V+K+++ Q+
Sbjct: 1056 FSIEDLDKTISSVNKIQHQHQQ 1077
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 702 (252.2 bits), Expect = 7.0e-88, Sum P(3) = 7.0e-88
Identities = 140/301 (46%), Positives = 189/301 (62%)
Query: 386 EYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHH 445
EY S WNLNN+P L+ S+L ++ +I+G+ VPWLY+GM FS+FCWH EDH YS+NY H
Sbjct: 56 EYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLH 115
Query: 446 WGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVL 505
WG+PK WY VP A E+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY
Sbjct: 116 WGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTN 175
Query: 506 QEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
Q G FV+TFPR+YH+GFN G N AEAVNF ADWLP G + Y++ + V SHEEL
Sbjct: 176 QCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEEL 235
Query: 566 LCVVAKSD--LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTE 623
+ +A LD ++ + +EL + +E RE + + G++ M + E V +
Sbjct: 236 IFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PD 290
Query: 624 EDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLT 683
++ C CR +LSA+ C C P VCL H LC C +K L YR+ L +L L
Sbjct: 291 DERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYG 350
Query: 684 V 684
V
Sbjct: 351 V 351
Score = 136 (52.9 bits), Expect = 7.0e-88, Sum P(3) = 7.0e-88
Identities = 78/337 (23%), Positives = 153/337 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W V + +S N IE+ V+ LE +A D K PE D+ K+ +
Sbjct: 354 RAQSYDTWVSRVTEALSANFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRKLRDAVK 408
Query: 932 QAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELEL---LKQYHS-DAIFWIAR- 986
+AE+C A ++ L +S K + G + EL ++Q S + AR
Sbjct: 409 EAETC-ASVAQLL---LSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 464
Query: 987 LNDILVNING--RKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHCRE 1038
+ ++L ++ + Q ++DE L ++ G+SL +++ +LP ++ EL++A +
Sbjct: 465 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLD 524
Query: 1039 KA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERAADILIH 1094
+ L D + + LD ++++ V L EK +L +L + RWEE+A L
Sbjct: 525 EVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA 584
Query: 1095 KAQ--MCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSL 1152
+ + + E I+ +++I LP++ ++ + A+ W E A+ S +
Sbjct: 585 RPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVE-------AIQSGS-NY 636
Query: 1153 LRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQ 1189
LE L+ L ++ + + + L+ ++E + W+
Sbjct: 637 AYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWR 673
Score = 112 (44.5 bits), Expect = 7.0e-88, Sum P(3) = 7.0e-88
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK +
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKEY 57
Score = 86 (35.3 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 54/240 (22%), Positives = 106/240 (44%)
Query: 983 WIARLNDIL-VNINGRKDQHNVIDELNCILKEGASLRIQVDDL-PLVEVELKKAH-C--- 1036
W++R+ + L N N +KD + EL +L++ + +DL + +K+A C
Sbjct: 361 WVSRVTEALSANFNHKKD----LIELRVMLEDAEDRKYPENDLFRKLRDAVKEAETCASV 416
Query: 1037 -------REKALKACD-----TKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLA 1079
++K ++ D TK+ ++ F++Q+ + VI Q + K +D
Sbjct: 417 AQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------ 470
Query: 1080 AAMRWEERAADILIHKA-QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELF 1138
+ ERA + ++ + + + +I ++V LP L ++ E+ A+ WL L
Sbjct: 471 DVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQAR-WLDEVRLT 529
Query: 1139 LASAFAVAPASCSLLRLESLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
L+ P +L ++ L D V + + K EL++++ ERW+ A LQ
Sbjct: 530 LSD-----PQQVTLDVMKKLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 583
Score = 78 (32.5 bits), Expect = 8.6e-82, Sum P(3) = 8.6e-82
Identities = 31/144 (21%), Positives = 63/144 (43%)
Query: 765 AVRDMVNKLIEGRRWAEGIRDCLHKAENWSSLPGSDSEKVRLDCVNELLGFDPLPCNEPG 824
A+ ++ L RW E + CL +A S+ +S VNE +P P
Sbjct: 560 AMAELQELLTVSERWEEKAKVCL-QARPRHSVASLES------IVNEAKN---IPAFLPN 609
Query: 825 HLILQNYAEEARSLIQEINAALSACSK--ISELELLYSRASGLPICIVESEKLSQRISSA 882
L L+ ++AR ++ A S + + +LE L ++ +P+ + ++ ++++A
Sbjct: 610 VLSLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAA 669
Query: 883 KVWRDSVRKCISNKCPAAIEIDVL 906
+ WR+ + K + + VL
Sbjct: 670 RAWRERTGRTFLKKNSSHTLLQVL 693
Score = 70 (29.7 bits), Expect = 6.0e-81, Sum P(3) = 6.0e-81
Identities = 48/271 (17%), Positives = 122/271 (45%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 442 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 501
Query: 912 EALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS-LKTVEL-LLQELGDFTVNMPE 969
L +++PE L + + QA R + +R ++S + V L ++++L D V +
Sbjct: 502 S---LYVELPELPRLKQELQQA-----RWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAP 553
Query: 970 LELLKQYHSDA--IFWIA-RLND-ILVNINGRKDQHNVIDELNCILKEGASLRIQVDDLP 1025
+++ ++ + ++ R + V + R +H+V L I+ E ++ + ++
Sbjct: 554 HHAVEKAMAELQELLTVSERWEEKAKVCLQARP-RHSVAS-LESIVNEAKNIPAFLPNVL 611
Query: 1026 LVEVELKKAH---CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAM 1082
++ L+KA + +A+++ L+ + ++A+ + + E L + +AAA
Sbjct: 612 SLKEALQKAREWTAKVEAIQSGSNYAYLEQLESLSAKGRPIPVRLEAL-PQVESQVAAAR 670
Query: 1083 RWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
W ER + K ++ DI V
Sbjct: 671 AWRERTGRTFLKKNSSHTLLQVLSPRTDIGV 701
Score = 62 (26.9 bits), Expect = 4.1e-80, Sum P(3) = 4.1e-80
Identities = 54/245 (22%), Positives = 96/245 (39%)
Query: 1549 VVDVALECKTCLTDIVKFESCYLDK--DLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
V+ A + K L D+ +F + D S+KL + + + V + L
Sbjct: 458 VISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYV-ELPELPRLKQE 516
Query: 1607 LARNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLM----ELNRIGSQ 1662
L + W V L + T+ ++ + G+ ++P H +K M EL + +
Sbjct: 517 LQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGV--GLAPH-HAVEKAMAELQELLTVSER 573
Query: 1663 WADVAKKVVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAM 1722
W + AK + S+ + ++ E +N+P +L L SL+ +K + A
Sbjct: 574 WEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVL-SLKEA------LQKAREWTAK 626
Query: 1723 IACYQCDEWY-HIDCVKLLSAP--EIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTP 1779
+ Q Y +++ ++ LSA I + PQ E RT FL+ K
Sbjct: 627 VEAIQSGSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLK-KNS 685
Query: 1780 SPKHT 1784
S HT
Sbjct: 686 S--HT 688
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 754 (270.5 bits), Expect = 1.4e-87, Sum P(2) = 1.4e-87
Identities = 161/403 (39%), Positives = 227/403 (56%)
Query: 296 SDKDSFGFVPGKRYTVESFRRVADRAKKKRFRS----GSASRVQMEKKFWEIVEGAAGNV 351
+++++FGF G +T+E F + A K F G S ++E ++W I+E V
Sbjct: 170 TEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKDNVGDPSVEEIEGEYWRIIEKETNEV 229
Query: 352 EVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHN 411
+V+YG+DL+ I GSGF + P N ++Y +S WNLNNL +L+GS+L
Sbjct: 230 KVLYGTDLENPILGSGFSKGVKI-PTR--RNDMDKYISSGWNLNNLARLQGSLLSFEDCE 286
Query: 412 ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSL 471
I+GV VPWLY+GM FS FCWH ED+ YS+NYHH+G+PK WY VPGS A EK MR L
Sbjct: 287 ISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHL 346
Query: 472 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 531
PDLFD QPDLL +LVT +P++L GVPVY +Q G +V+TFPR+YH+GFN G NCAE
Sbjct: 347 PDLFDEQPDLLHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAE 406
Query: 532 AVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYT 591
AVN AP DWL HG ++Y Q + LSH+++L A + S +S + + R
Sbjct: 407 AVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFEAVKS-LSAHGEDNTKRFSW 465
Query: 592 KERMWRERLWRKGIIKSTPMGPRKCP------EYVGTEED------PTCIICRQYLYLSA 639
K ++ + K I M ++ V ++D CI C L+LSA
Sbjct: 466 KRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLVKMDKDFDSNCERECISCFSDLHLSA 525
Query: 640 VACR-CRPAA-FVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
C+ C + C +H +C C+ + + R+T+ EL L
Sbjct: 526 TGCKNCSSLEEYGCTKH--DICSCEGKDRFIFLRYTIDELSSL 566
Score = 166 (63.5 bits), Expect = 1.4e-87, Sum P(2) = 1.4e-87
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSF----TFPTKTQ 86
PV++PT +EF+D L YI KIR AE +GIC+IVPP +W PP L S FPT+ Q
Sbjct: 62 PVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPPCRLKGDSIWKNKNFPTRVQ 121
Query: 87 AIHQLQAR 94
+ LQ R
Sbjct: 122 FVDLLQNR 129
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 686 (246.5 bits), Expect = 9.5e-86, Sum P(3) = 9.5e-86
Identities = 160/405 (39%), Positives = 217/405 (53%)
Query: 263 LCDRCNKGWHVYC-LSPPLKHVPRGNWYCLECLNSDKDSFGFVPGKRYTVESFRRVADRA 321
LCD C+K V C + K YC +C+ + + FGF G YT+ +F + D
Sbjct: 311 LCDNCHKP--VNCEVEDTCKEA-----YCTKCIINPYE-FGFETGNYYTLSNFEKYCDNF 362
Query: 322 KKKRFRSGSASRVQ---MEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPES 378
KK F S + +EK++W++V+ ++EV YG+DL T GS FP S
Sbjct: 363 KKNYFSKFKDSEITEDIVEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFP--------S 414
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
+ N N Y WNLN + GS+L + + ++G+ PWLY+GM FS FCWH ED+
Sbjct: 415 LAKNPVNPYSKDTWNLNVIASTNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYT 474
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+GD K WY +PG +A FE+ PDL Q DLL+QL TM+NP L + G
Sbjct: 475 YSVNYQHYGDTKLWYGIPGDQAERFERAALDIAPDLVKKQKDLLYQLATMINPDELQKRG 534
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGF--GADLYQQYHK 556
V VY + Q P FVITFP+S+HAG N G N EAVNFAP DWL +G G YQ K
Sbjct: 535 VDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVNFAPKDWLLNGFSLNGVLKYQSLLK 594
Query: 557 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKC 616
VLSH+ L+ +A + S++S EL R + E + RE R I +
Sbjct: 595 PPVLSHDMLVYNLATNPA-SEISV---SEL-RPWVHEAVKRELGIRIMIRGRYDLKEILY 649
Query: 617 PEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCEC 661
E + E+ C C+ + Y S VAC C+ VC H E+LC+C
Sbjct: 650 RELMEDAENWQCQHCKAFSYFSQVACSCKSIT-VCPLHIEYLCKC 693
Score = 201 (75.8 bits), Expect = 9.5e-86, Sum P(3) = 9.5e-86
Identities = 44/130 (33%), Positives = 65/130 (50%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+YP ++EF+D + YI KI E+YGI KIVPP W PP LD+ F+F T+ Q +H
Sbjct: 61 PVFYPDKEEFQDSIGYINKIAPIGEKYGIIKIVPPAGWNPPMQLDMNKFSFRTRRQDLHM 120
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGY-DKVV 149
+ R S ++ RF ++G +L + F +DL L +K +
Sbjct: 121 MDLRFREIVS--YDERVYRFFC-NLGMELPESFFISNTSIDLYSLMRCIDSHASLSEKEL 177
Query: 150 KEKKWGEVFR 159
K W + R
Sbjct: 178 KVHVWKRILR 187
Score = 50 (22.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCL-RPTEVDRNHAEAYICP----YCQYFESESVSQFG 1510
C++ K + + CK+ Y +C+ P E Y YC F+ S+F
Sbjct: 312 CDNCHKPVNCEVEDTCKEAYCTKCIINPYEFGFETGNYYTLSNFEKYCDNFKKNYFSKFK 371
Query: 1511 GSPL 1514
S +
Sbjct: 372 DSEI 375
Score = 43 (20.2 bits), Expect = 9.5e-86, Sum P(3) = 9.5e-86
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 897 CPAAIEIDVLYKLESEALDLKIDVPETDMLL 927
CP IE L ++ L LK+D E LL
Sbjct: 683 CPLHIEYLCKCDLSNKTLRLKVDDNELQKLL 713
Score = 39 (18.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 247 QICEQCKS----GLHGEVMLLCDRCNK 269
Q+ CKS LH E + CD NK
Sbjct: 672 QVACSCKSITVCPLHIEYLCKCDLSNK 698
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 706 (253.6 bits), Expect = 1.1e-81, Sum P(3) = 1.1e-81
Identities = 159/405 (39%), Positives = 218/405 (53%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
D EDE D C C H LLCD C+ +H+ CL+PPL+ VP +WYC +CL +
Sbjct: 172 DSEDEYDS-CLVCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYCDKCLIGTGE 230
Query: 300 SFGFVPGK--RYTVESFRRVADRAKKKRFR----SGSASRVQMEKKFWEIVEGAAGNVEV 353
+GF +YT+ F ++ K R + S +E+KFW V+ ++EV
Sbjct: 231 -YGFDEDVDVKYTIPEFYKMCQDFDAKFIRDYNQNNPLSVDDIERKFWSFVDAEKSDLEV 289
Query: 354 MYGSDLDTSIYG--SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHN 411
YG+D+ G SGFP ++ D + Y N PWNLN LP GS+L ++ +
Sbjct: 290 KYGADIHNLRPGEVSGFPMADTPSLDTTDPAI-QYYINHPWNLNKLPFSNGSLLNFINTS 348
Query: 412 ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSL 471
I+G+ +PW+Y+G L S FCWH EDH S NY H+G K WY +P S A FEK+MR S
Sbjct: 349 ISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSSFADKFEKLMRDSA 408
Query: 472 PDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAE 531
PDLF QPDLL QLVT+++PS LVE+G+P Q FVIT+P YHAGFN G N E
Sbjct: 409 PDLFKRQPDLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYHAGFNCGFNFNE 468
Query: 532 AVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELL-CVVAKSDLDSKVSPYLKRELLRVY 590
AVNFA +WL G + Y+ K V +H ELL ++++ + VS L + L +
Sbjct: 469 AVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVSLDLVKRSLWSF 528
Query: 591 TKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQYL 635
+ E L + KST K P +ED C C+ ++
Sbjct: 529 ERYVSRLEELLAQLKDKSTV--EYK-PSVDNNDEDDLCDSCKTHI 570
Score = 143 (55.4 bits), Expect = 1.1e-81, Sum P(3) = 1.1e-81
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 31 PVYYPTEDEFKDPLEYIC--KIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAI 88
PV PT+ EF DP+ Y+ K+ YG+ KIVPP +WKP F ++ F F + Q +
Sbjct: 12 PVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPPPNWKPSFHIN-PDFKFHVRKQVL 70
Query: 89 HQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFF--EGEELDLCKLFNAAKRFGGYD 146
L + + D F +RFLK + K K++F +G + L+ + G +
Sbjct: 71 SDLGITTRSRDF--FRENINRFLK--MRRKRQLKLYFNVQGTRVYYYDLYREVENLG--E 124
Query: 147 KVVKEKKW 154
+ KEK W
Sbjct: 125 PMDKEK-W 131
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 26/119 (21%), Positives = 52/119 (43%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPP-LKHVPRGN 287
D+ V+ VD DE D +C+ CK+ + + +L +K SP ++ P N
Sbjct: 544 DKSTVEYKPSVDNNDE-DDLCDSCKTHIGFQYFVLEPENSKQLLTPDASPQEIETKPNKN 602
Query: 288 WYCLECLNSDKD-SFGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVE 345
+ NS + ++ V+ F + ++AKK + +++V+ K+ + E
Sbjct: 603 EEAKKVANSQASHDLASLNERKAMVDEFNSLIEKAKKD-VDNDESTKVRRSKRIHSLKE 660
Score = 60 (26.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPEI-YICAACKPQAEESSTPQNVDGGR 1768
+C + + C CD YH+ C+ L S P + C C E ++VD
Sbjct: 182 VCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYCDKCLIGTGEYGFDEDVDVKY 241
Query: 1769 TNAEF 1773
T EF
Sbjct: 242 TIPEF 246
Score = 48 (22.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 549 DLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYT-KERMWRERLWR---KG 604
DL + A++ L AK D+D+ S ++R R+++ KE+ +R + K
Sbjct: 616 DLASLNERKAMVDEFNSLIEKAKKDVDNDESTKVRRSK-RIHSLKEKEVPQRPTKRAKKN 674
Query: 605 IIKSTPMGPRKCPEYV 620
IIK + C E V
Sbjct: 675 IIKKKAAQSKLCSECV 690
Score = 42 (19.8 bits), Expect = 1.1e-81, Sum P(3) = 1.1e-81
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 1217 VSKIEQLITSMESAANCGLSLGFDFHEISELQNACST 1253
VS++E+L+ ++ + D ++ +L ++C T
Sbjct: 532 VSRLEELLAQLKDKSTVEYKPSVDNNDEDDLCDSCKT 568
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 617 PEYVGTEEDPTCIICRQYLYLS-AVAC-RC-RPAAFVCL 652
PE +E +C++C Q+ + S + C C P CL
Sbjct: 169 PESDSEDEYDSCLVCGQHDHPSETLLCDNCDNPYHMKCL 207
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 776 (278.2 bits), Expect = 4.4e-81, Sum P(2) = 4.4e-81
Identities = 158/351 (45%), Positives = 217/351 (61%)
Query: 336 MEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLN 395
+EK+FW +V +V V YG+D+ + +GSGFP V D R + + EY S WNLN
Sbjct: 7 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFP-VKDGRRKMLPEE--EEYALSGWNLN 63
Query: 396 NLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSV 455
N+P L+ S+L ++ +I+G+ VPWLY+GM FS+FCWH EDH YS+NY HWG+PK WY V
Sbjct: 64 NMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGV 123
Query: 456 PGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITF 515
P A E+VMR P+LF++QPDLL QLVT++NP+VL+E+GVPVY Q G FV+TF
Sbjct: 124 PSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTF 183
Query: 516 PRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSD-- 573
PR+YH+GFN G N AEAVNF ADWLP G + Y++ + V SHEEL+ +A
Sbjct: 184 PRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMAADPEC 243
Query: 574 LDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICRQ 633
LD ++ + +EL + +E RE + + G++ M + E V +++ C CR
Sbjct: 244 LDVGLAAMVCKELTLMTEEETRLRESVVQMGVL----MSEEEVFELV-PDDERQCSACRT 298
Query: 634 YLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDLFLTV 684
+LSA+ C C P VCL H LC C +K L YR+ L +L L V
Sbjct: 299 TCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRYPLEDLPSLLYGV 349
Score = 82 (33.9 bits), Expect = 4.4e-81, Sum P(2) = 4.4e-81
Identities = 60/236 (25%), Positives = 107/236 (45%)
Query: 878 RISSAKVWRDSVRKCIS---NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKM---IG 931
R S W V + +S N IE+ V+ LE +A D K PE D+ ++ +
Sbjct: 352 RAQSYDTWVSRVTEALSASFNHKKDLIELRVM--LE-DAEDRKY--PENDLFRQLRDAVK 406
Query: 932 QAESCRARCSEAL------RGSM-SLKT-VELLLQELGDFTVNMPELE-LLKQYHSDAIF 982
+AE+C + L R S S +T +L ++EL F + L ++ Q
Sbjct: 407 EAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ---- 462
Query: 983 WIARLNDILVNINGRKDQHNVIDE------LNCILKEGASLRIQVDDLPLVEVELKKAHC 1036
+ L D + + R Q ++DE L ++ G+SL +++ +L ++ EL++A
Sbjct: 463 -VKNLLDDVEEFHERA-QEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQARW 520
Query: 1037 REKA-LKACDTK-MPLDFIRQVTAEAVILQIER--EKLFIDLSGVLAAAMRWEERA 1088
++ L D + + LD ++++ V L EK +L +L + RWEE+A
Sbjct: 521 LDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKA 576
Score = 81 (33.6 bits), Expect = 5.7e-81, Sum P(2) = 5.7e-81
Identities = 50/222 (22%), Positives = 96/222 (43%)
Query: 984 IARLNDILVNINGRK-DQHNVIDELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALK 1042
+ L +L + RK ++++ +L +KE A V L L + K+ H +
Sbjct: 377 LIELRVMLEDAEDRKYPENDLFRQLRDAVKE-AETCASVAQLLLSK---KQKHRQSPDSG 432
Query: 1043 ACDTKMPLD----FIRQV-TAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHKA- 1096
TK+ ++ F++Q+ + VI Q + K +D + ERA + ++ +
Sbjct: 433 RTRTKLTVEELKAFVQQLFSLPCVISQARQVKNLLD------DVEEFHERAQEAMMDETP 486
Query: 1097 QMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLE 1156
+ + +I ++V LP L ++ E+ A+ WL L L+ P +L ++
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLKQELQQAR-WLDEVRLTLSD-----PQQVTLDVMK 540
Query: 1157 SLKDL-VSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQ 1197
L D V + + K EL++++ ERW+ A LQ
Sbjct: 541 KLIDSGVGLAPHHAVE-KAMAELQELLTVSERWEEKAKVCLQ 581
Score = 57 (25.1 bits), Expect = 7.4e-80, Sum P(3) = 7.4e-80
Identities = 51/221 (23%), Positives = 91/221 (41%)
Query: 1520 RSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVALECKTCLTD----IVKFESCYLDKDL 1575
+ DL L +L D+E R D+ +++ D E +TC + + K + D
Sbjct: 374 KKDLIELRVMLEDAED--RKYPENDLFRQLRDAVKEAETCASVAQLLLSKKQKHRQSPDS 431
Query: 1576 HVISNKLTIT-LKAREAAGVFD--------RQSNSALDFALARNLWRVRVSKLLEGLTKP 1626
KLT+ LKA +F RQ + LD + R + + T P
Sbjct: 432 GRTRTKLTVEELKAF-VQQLFSLPCVISQARQVKNLLDDV---EEFHERAQEAMMDET-P 486
Query: 1627 TIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVFELI 1686
++Q + G + + + R K EL + ++W D + + D ++LD + +LI
Sbjct: 487 DSSKLQMLIDMGSSLYVELPELARLK-QELQQ--ARWLDEVRLTLSDPQQVTLDVMKKLI 543
Query: 1687 AEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ 1727
G L + E K++ L + + ++EKA + C Q
Sbjct: 544 DSGVGLAPHHAVE-KAMAELQELLTVSER-WEEKAKV-CLQ 581
Score = 56 (24.8 bits), Expect = 2.4e-78, Sum P(2) = 2.4e-78
Identities = 14/82 (17%), Positives = 40/82 (48%)
Query: 852 ISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLES 911
+ EL+ + LP I ++ ++ + + + + ++ + ++ P + ++ +L + S
Sbjct: 440 VEELKAFVQQLFSLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGS 499
Query: 912 EALDLKIDVPETDMLLKMIGQA 933
L +++PE L + + QA
Sbjct: 500 S---LYVELPELARLKQELQQA 518
Score = 39 (18.8 bits), Expect = 7.4e-80, Sum P(3) = 7.4e-80
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 1388 DCPEL-EKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHR 1436
D P L V + + W R E + S K L+ L ++ + R
Sbjct: 341 DLPSLLYGVKVRAQSYDTWVSRVTEALSASFNHKKDLIELRVMLEDAEDR 390
Score = 39 (18.8 bits), Expect = 1.5e-76, Sum P(2) = 1.5e-76
Identities = 32/153 (20%), Positives = 62/153 (40%)
Query: 1295 SLIHGVK--------WLKRALEVISAPCKFKRCKLSDVEEVLAGCKGINFSFPVVIGELT 1346
SL++GVK W+ R E +SA K+ L ++ +L + + + +L
Sbjct: 344 SLLYGVKVRAQSYDTWVSRVTEALSASFNHKK-DLIELRVMLEDAEDRKYPENDLFRQLR 402
Query: 1347 SAIQKHKLWQEQVHQFFNLKCA-QQS-----WSLMLQLKELGEAAA--FDCP----ELEK 1394
A+++ + + K +QS L ++EL F P + +
Sbjct: 403 DAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQ 462
Query: 1395 VLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLL 1427
V + +D VE + +R +E + D + L L+
Sbjct: 463 VKNLLDDVEEFHERAQEAMMDETPDSSKLQMLI 495
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 661 (237.7 bits), Expect = 9.5e-76, Sum P(2) = 9.5e-76
Identities = 145/409 (35%), Positives = 222/409 (54%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
D E++ D C C+ + +LCD C+K +H+YCLSPPL+ VP G+W C C+ +
Sbjct: 229 DFEEDDDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCIVGN-G 287
Query: 300 SFGFVPGKR-YTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIV--EGAAGNVEVMYG 356
+GF Y++ F+ R + + S ++E+ FW +V + V YG
Sbjct: 288 YYGFTQDTHDYSLPEFQEYCKRQNSRLLPARKLSIDELEEMFWSLVTKNRRSSLTTVKYG 347
Query: 357 SDLDTSIYG--SGFPRVCDHRPESVDANV---WNEYCNSPWNLNNLPKLKGSILRMVHHN 411
+D+ + G +GFP + P++++ + + +YC+ P NL NLP S+L + N
Sbjct: 348 ADIHNELPGQITGFP-TREFIPKNINGDELIDYLKYCDHPMNLTNLPMAHNSLLPLFKRN 406
Query: 412 ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSL 471
I+G+ +PW+Y+G LFS FCWH ED S NY H GDPK WYS+P S F ++
Sbjct: 407 ISGMTIPWIYIGSLFSTFCWHMEDQYTLSANYQHEGDPKVWYSIPESGCTKFNDLLNDMS 466
Query: 472 PDLFDAQPDLLFQLVTMLNP--SVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNC 529
PDLF QPDLL QLVT+++P ++G+PVY +Q+P ++ITFP+ YHAGFN G N
Sbjct: 467 PDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNF 526
Query: 530 AEAVNFAPADWLPHGGFGADL-YQQYHKAAVLSHEELLC-VVAKSDLDSKV--SPYLKR- 584
EAVNF WLP+G FGA Y+ KA V +L+ V+ K + D+ + ++++
Sbjct: 527 NEAVNFTIDFWLPYG-FGAITDYKLTQKACVFDMFDLMINVLDKYNKDTLLFNDAFVRQC 585
Query: 585 -ELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVGTEEDPTCIICR 632
L V+ + R R + + ++T + P E D C C+
Sbjct: 586 YSSLIVFYNTELKRIRKIQAIVPRTTLLEVHTDPNDEDEEYDIFCSQCK 634
Score = 148 (57.2 bits), Expect = 9.5e-76, Sum P(2) = 9.5e-76
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 31 PVYYPTEDEFKDPLEYICK--IRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAI 88
P YPTE EFK+P++Y+ I+ RYG+ K+VPP + PP ++D+ +FTF + Q +
Sbjct: 5 PALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKVVPPNGFCPPLSIDMENFTFQPRIQNL 64
Query: 89 HQLQARS 95
L ++
Sbjct: 65 ENLDLKN 71
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 1711 CI-CRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE-IYICAAC 1751
CI CRK D K I C CD+ +HI C+ L P +IC C
Sbjct: 238 CIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
Score = 71 (30.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C+ C + ++C +C +H+ CL P ++R + +IC C
Sbjct: 238 CIVCRKTNDPKRTILCDSCDKPFHIYCLSPP-LERVPSGDWICNTC 282
Score = 47 (21.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 240 DKEDELDQICEQCKS 254
D+++E D C QCK+
Sbjct: 621 DEDEEYDIFCSQCKT 635
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 623 EEDPTCIICRQ 633
++D CI+CR+
Sbjct: 233 DDDDACIVCRK 243
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 1217 VSKIEQLITSMESAANCGLSLGFDFHE 1243
V K + I + + G + G++F+E
Sbjct: 502 VQKPNEYIITFPKCYHAGFNTGYNFNE 528
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 520 (188.1 bits), Expect = 5.8e-61, Sum P(3) = 5.8e-61
Identities = 138/405 (34%), Positives = 199/405 (49%)
Query: 306 GKRYTVESFRRVADRAKKKRFRS-----GSASR-----------VQMEKKFWEIVEGAAG 349
G YT++SF+ AD KK F GS + +EK++ +IVE
Sbjct: 203 GPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKPNELIVADIEKEYRQIVESPLI 262
Query: 350 NVEVMYGSDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVH 409
+ V+YG+DLDT+ +GSGFP ES ++Y +S WNLN+ KL GS+L +
Sbjct: 263 EIGVLYGNDLDTATFGSGFPLSAPS--ES------SKY-SSGWNLNSTAKLPGSLLSL-- 311
Query: 410 HNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRS 469
+ V VP L +GM S+ W E YS+ Y H G P+ WYSV G F+ M+S
Sbjct: 312 EDCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKS 371
Query: 470 SLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNC 529
+ ++ QP V M++P L G+PV +Q PG +VI FP SY++ F+ G NC
Sbjct: 372 FILEMSGEQPKKSHNPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGFNC 431
Query: 530 AEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRV 589
E NFAP DWLPHG + Q+ K +++S+++LL A+ + L ++
Sbjct: 432 LEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTAC 491
Query: 590 YTKERMWRERLWRKG----IIKSTPMGPRKCPEY-VGTEE----DPT--------CIICR 632
YT+ W + G IIKS + E+ + + E D + C +C
Sbjct: 492 YTR---WNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCL 548
Query: 633 QYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAEL 677
LYLSAV C C + CL H LC C + LYR+T+ EL
Sbjct: 549 GDLYLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDEL 593
Score = 153 (58.9 bits), Expect = 5.8e-61, Sum P(3) = 5.8e-61
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFAL 74
PV+ PTE+EF+D L YI +R AE YGIC +VPP SWKPP L
Sbjct: 109 PVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLL 152
Score = 55 (24.4 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 25/109 (22%), Positives = 42/109 (38%)
Query: 841 EINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRK--CISNKCP 898
++N +S S IS +LL+S A C+ E + + W DS SN
Sbjct: 451 QVNQEMSKTSLISYDKLLFSAAREAVKCLKEYGLSKKNTACYTRWNDSCGTDGLFSNIIK 510
Query: 899 AAIEID------VLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCS 941
+ I+++ ++ LES+ +D D +G CS
Sbjct: 511 SRIKLEKNRREFLISSLESQRMDKSYDAVNKRECCVCLGDLYLSAVNCS 559
Score = 37 (18.1 bits), Expect = 5.8e-61, Sum P(3) = 5.8e-61
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 1712 ICRKPYDEKAMIACYQCDE 1730
+C P D K+ + Y DE
Sbjct: 574 LCACPCDRKSFLYRYTMDE 592
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 373 (136.4 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 111/390 (28%), Positives = 182/390 (46%)
Query: 304 VPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSI 363
V G+ + F R+A F+S + ++E +FW V +V V GS +D+S
Sbjct: 1959 VKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGS-IDSSG 2017
Query: 364 YGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLG 423
+G GFP P+ +N Y PWNL L GS+LR + + GV VP L++G
Sbjct: 2018 WGYGFP---SPGPKGKGSN----YARHPWNLKVLTNNSGSVLRSLGP-VMGVTVPTLHVG 2069
Query: 424 MLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLF 483
MLFSA CW+ + H + Y H G K WY +P ++ F + S +P + L
Sbjct: 2070 MLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLP 2129
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
M+ P +L + GV + + Q+PG F++ FPR+Y + G +E+V FA WL
Sbjct: 2130 CDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLD- 2188
Query: 544 GGFGADLYQQYHKA---AVLSHEELLCVVAKSD-LDSKVSPYLKRELLRVYTKERMWRER 599
D ++ H++ A+ S E+LL + ++S+ + L V KE RE+
Sbjct: 2189 --LAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQ 2246
Query: 600 LWRKGIIKSTPMGPRKCPEYVGTEEDP------TCIICRQYLYLSAVACRCRPAAFVCLE 653
L G+ + + K + ++ P C +CR LY+S V R CL+
Sbjct: 2247 LRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQ 2304
Query: 654 H-WEHLCE--CKTRKLHLLYRHTLAELYDL 680
H ++L + ++ L+Y + + ++ L
Sbjct: 2305 HALKNLNNGNIQAKQCKLIYAYNVDDIQQL 2334
Score = 197 (74.4 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 45/130 (34%), Positives = 74/130 (56%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P++ PTE EF DP+E+I +I A R+GICKI+PP S+KP + F Q +H+
Sbjct: 1742 PIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRIS-DEMRFTAYNQYVHK 1800
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTK---LNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
+ R +K E S +K+++ T+ +N + G E+DL +L++ + GG +
Sbjct: 1801 MLHRWGP-SAK----ELSA-IKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKE 1854
Query: 148 VVKEKKWGEV 157
V+++KKW V
Sbjct: 1855 VIEKKKWARV 1864
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ C+ C++ L+ ++ R G ++YCL LK++ GN +C
Sbjct: 2277 IESECDLCRANLYISMV----RTEDG-NIYCLQHALKNLNNGNIQAKQC 2320
Score = 45 (20.9 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 16/75 (21%), Positives = 31/75 (41%)
Query: 1036 CREKALKACDTKMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAAAMRWEERAADILIHK 1095
C K + TK+ + + + + ER+KLF ++ A R AD ++
Sbjct: 1869 CIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNT 1928
Query: 1096 AQMCEFEDIIRASQD 1110
+ ED + + +D
Sbjct: 1929 ESVSNEEDDLSSDED 1943
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 1350 QKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRC 1409
QK K Q+ ++ +C +L + + + + C L+ L ++ ++C
Sbjct: 2264 QKAKKQQQPPYKSIESECDLCRANLYISMVRTEDGNIY-C--LQHALKNLNNGNIQAKQC 2320
Query: 1410 KEIVGTSVGDKNSLLGLLQK 1429
K I +V D L+ LQ+
Sbjct: 2321 KLIYAYNVDDIQQLIRQLQE 2340
Score = 39 (18.8 bits), Expect = 6.1e-07, Sum P(4) = 6.1e-07
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 1288 FSSMLWNSLIHGVKWLK 1304
FS+ W HG+ W++
Sbjct: 2072 FSACCWYRDPHGLSWIE 2088
Score = 37 (18.1 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 19/76 (25%), Positives = 34/76 (44%)
Query: 1071 FIDLSGVLAAAMRWEERAADIL--IHKA---QMCEFEDIIRA--------SQDIFVVLPS 1117
++ V A M W + A D IH++ M E ++ A S+ + +LP
Sbjct: 2173 YVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPM 2232
Query: 1118 LDEVQNEISTAKSWLK 1133
L++V + S A+ L+
Sbjct: 2233 LNDVCEKESAAREQLR 2248
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 359 (131.4 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 118/394 (29%), Positives = 185/394 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 815 GRSVSLTTFYRTARNIMNMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 872
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 873 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 920
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 921 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEENKLEDVVHTLLQG--NGTPGLQML 977
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL + G+ V+ +Q+ G FV+ FP S+ + G N +E V+FA W
Sbjct: 978 ESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSM 1037
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R L
Sbjct: 1038 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLL 1097
Query: 601 WRKGIIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S G +K P +++ E + C IC+ YLS V
Sbjct: 1098 FEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVV 1157
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1158 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1190
Score = 198 (74.8 bits), Expect = 3.5e-43, Sum P(2) = 3.5e-43
Identities = 52/173 (30%), Positives = 79/173 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +RA+ E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 556 PVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 614
Query: 91 LQARSAACDSKTFELEYSRFLKEHV---GTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L R ++ +K+H+ G +++ G ELDL F GG +
Sbjct: 615 LGRRWGP------NVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQ 668
Query: 148 VVKEKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
V KKW ++ +R + D A+ CQ +L KEV
Sbjct: 669 VTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 721
Score = 53 (23.7 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 1636 KEGLLMNISPKDHYRQKLMELNR 1658
K GL+ ++P++ +R KL E+ R
Sbjct: 755 KNGLVHGVTPRNGFRSKLKEVGR 777
Score = 41 (19.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 924 DMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQYHSDA 980
+ LL I QAE+ + +L T+ LL EL D + L HS A
Sbjct: 1057 EKLLYQIAQAEAKK-------ENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSA 1106
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 360 (131.8 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 117/394 (29%), Positives = 185/394 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 811 GRSVSLTTFYRTARNIMNMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 868
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 869 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 916
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 917 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEENKLEDVVHTLLQA--NGTPGLQML 973
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL GV V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 974 ESNVMISPEVLCREGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1033
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R +L
Sbjct: 1034 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQL 1093
Query: 601 WRKGIIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S P G +K +++ E + C +C+ YLS V
Sbjct: 1094 FEAGLHSSARYGSHDGGSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVV 1153
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1154 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1186
Score = 194 (73.4 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 51/173 (29%), Positives = 78/173 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +R + E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 552 PVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 610
Query: 91 LQARSAACDSKTFELEYSRFLKEHV---GTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L R ++ +K+H+ G +++ G ELDL F GG +
Sbjct: 611 LGRRWGP------NVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQ 664
Query: 148 VVKEKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
V KKW ++ +R + D A+ CQ +L KEV
Sbjct: 665 VTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 717
Score = 49 (22.3 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALS 1678
K GL+ ++ ++ +R KL E+ R+ +Q +VAK+ D G LS
Sbjct: 751 KNGLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVAKEEEEDKGILS 802
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 356 (130.4 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 117/394 (29%), Positives = 186/394 (47%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 817 GRSVSLTTFYRTARNIMSMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 874
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 875 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 922
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 923 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEENKLEDVVHTLLQA--NGTPGLQML 979
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 980 ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1039
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R +L
Sbjct: 1040 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQL 1099
Query: 601 WRKGIIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S G +K P +++ E + C IC+ YLS V
Sbjct: 1100 FEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVV 1159
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1160 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1192
Score = 198 (74.8 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +RA+ E++G+C+++PP W+P L+ F T+ Q IH+
Sbjct: 558 PVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 616
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L R + ++ + LK G +++ G ELDL F GG +V
Sbjct: 617 LGRRWGPNVQRLACIK--KHLKSQ-GITMDELPLIGGCELDLACFFRLINEMGGMQQVTD 673
Query: 151 EKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
KKW ++ +R R D A+ CQ +L KEV
Sbjct: 674 LKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 723
Score = 53 (23.7 bits), Expect = 7.5e-11, Sum P(2) = 7.5e-11
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALSLDKVFELI 1686
K GL+ ++P++ +R KL E+ R+ +Q +V K+ D G L+ + I
Sbjct: 757 KNGLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLN--DFHKCI 814
Query: 1687 AEGENLPVYLEKELKSLRARSMLYCICRKP 1716
+G + V L ++ R M C ++P
Sbjct: 815 YKGRS--VSLTTFYRTAR-NIMSMCFSKEP 841
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 357 (130.7 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 116/394 (29%), Positives = 185/394 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 829 GRSVSLTTFYRTARNIMNMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 886
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 887 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 934
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 935 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEEHKLEDVVHTLLQA--NGTPGLQML 991
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 992 ESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1051
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R +L
Sbjct: 1052 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQL 1111
Query: 601 WRKGIIKST-----------PMGPRKCPEYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S P G +K +++ E + C +C+ YLS V
Sbjct: 1112 FEAGLHSSARYGSHDGSSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVV 1171
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1172 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1204
Score = 197 (74.4 bits), Expect = 7.5e-43, Sum P(2) = 7.5e-43
Identities = 52/173 (30%), Positives = 78/173 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +R + E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 570 PVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 628
Query: 91 LQARSAACDSKTFELEYSRFLKEHV---GTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L R ++ +K+H+ G +++ G ELDL F GG +
Sbjct: 629 LGRRWGP------NVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQ 682
Query: 148 VVKEKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
V KKW ++ +R R D A+ CQ +L KEV
Sbjct: 683 VTDLKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 735
Score = 45 (20.9 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALS 1678
K GL+ ++ ++ +R KL E+ R+ +Q +V K+ D G LS
Sbjct: 769 KNGLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVVKEEEEDKGILS 820
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 355 (130.0 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43
Identities = 116/394 (29%), Positives = 186/394 (47%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 820 GRSVSLTTFYRTARNIMNMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 877
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 878 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 925
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 926 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEENKLEDVVHTLLQA--NGTPGLQML 982
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 983 ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1042
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R +L
Sbjct: 1043 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQL 1102
Query: 601 WRKGIIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S G +K P +++ E + C +C+ YLS V
Sbjct: 1103 FEAGLHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVV 1162
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1163 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1195
Score = 199 (75.1 bits), Expect = 7.6e-43, Sum P(2) = 7.6e-43
Identities = 52/173 (30%), Positives = 79/173 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +RA+ E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 561 PVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 619
Query: 91 LQARSAACDSKTFELEYSRFLKEHV---GTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L R ++ +K+H+ G +++ G ELDL F GG +
Sbjct: 620 LGRRWGP------NVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQ 673
Query: 148 VVKEKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
V KKW ++ +R + D A+ CQ +L KEV
Sbjct: 674 VTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 726
Score = 46 (21.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALS 1678
K GL+ ++ ++ +R KL E+ R+ +Q +VA++ D G LS
Sbjct: 760 KNGLINGVAHRNGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLS 811
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 355 (130.0 bits), Expect = 7.8e-43, Sum P(2) = 7.8e-43
Identities = 116/394 (29%), Positives = 186/394 (47%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 830 GRSVSLTTFYRTARNIMNMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 887
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 888 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 935
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P E E V+ + L + P L +
Sbjct: 936 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAEEENKLEDVVHTLLQA--NGTPGLQML 992
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P VL + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 993 ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1052
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ H A S E+LL +A+++ + P L LL + E R +L
Sbjct: 1053 GFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQL 1112
Query: 601 WRKGIIKSTPMGP----------RKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ S G +K P +++ E + C +C+ YLS V
Sbjct: 1113 FEAGLHSSARYGSHDSNGAMADGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVV 1172
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L L+YR+ ++ L
Sbjct: 1173 F-CLECALRHVEKQKSCRGLKLMYRYDEEQIISL 1205
Score = 199 (75.1 bits), Expect = 7.8e-43, Sum P(2) = 7.8e-43
Identities = 52/173 (30%), Positives = 79/173 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +RA+ E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 571 PVLRPSAKEFHDPLVYIESVRAQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 629
Query: 91 LQARSAACDSKTFELEYSRFLKEHV---GTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
L R ++ +K+H+ G +++ G ELDL F GG +
Sbjct: 630 LGRRWGP------NVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQ 683
Query: 148 VVKEKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
V KKW ++ +R + D A+ CQ +L KEV
Sbjct: 684 VTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 736
Score = 46 (21.3 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALS 1678
K GL+ ++ ++ +R KL E+ R+ +Q +VA++ D G LS
Sbjct: 770 KNGLINGVAHRNGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLS 821
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 389 (142.0 bits), Expect = 1.9e-42, Sum P(5) = 1.9e-42
Identities = 128/479 (26%), Positives = 206/479 (43%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC-LN-SDKDSF 301
E + CE C + E +LLCD C +H CL PPL +P+ +WYC C N SD D
Sbjct: 266 ERGEQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFNISDYDPR 325
Query: 302 -GFV----PGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWE-IVEGAAGNVEV-M 354
GF K + E F + +R + + + +++ +W + E +G + +
Sbjct: 326 KGFKWKLSSLKERSAEIFNTLGERNSSSKLTNLTEDDIELF--YWSSLAESNSGFAPLEL 383
Query: 355 YG-SDLDTSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNIT 413
G S TS S P S + +Y + PWNL+NLP + +++
Sbjct: 384 EGLSQAYTSTIQSSLP--------SKEVFPLEKYSSEPWNLHNLPFENPCLFNYSFSDLS 435
Query: 414 GVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPD 473
+ + L +GM+F W +++H +GD WY +P E+ AFE+ + SS P
Sbjct: 436 SLTITRLSIGMVFYTHGWTKSSLSTGLLHHHRFGDTVTWYVLPPDESDAFERYLISSYPQ 495
Query: 474 LFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAV 533
+ L +++PS L+ENG ++ P F++ P SYH GF+ G + E+V
Sbjct: 496 YTMEDLNRSNGLPVIVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESV 555
Query: 534 NFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKE 593
NFA +W+ G + + + S V+ L SK +P E L ++
Sbjct: 556 NFATVNWIKDGLLNSSI-SVLKSMRIPSSVSYEAVIISMVL-SK-NPCFSSEWLIKCFED 612
Query: 594 RMWRERLWRKGIIKSTP-MGPRKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAAFVCL 652
+ E + I+K P + K V E C C+Q +LS + C P F+CL
Sbjct: 613 MIANESASKNEIMKLVPNIQALKLESSVPLEI--RCSNCKQPCFLSFMQCH-EPKKFICL 669
Query: 653 EHWEHLCECKTRKLHLLYR---HTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRP 708
L YR H L+ L + F+++ R LR +S+S +P
Sbjct: 670 GDCVKEVSLNATSWMLFYRWDVHELSNLAERFVSLIRGPEEWTNR---LRSVLSTSPKP 725
Score = 117 (46.2 bits), Expect = 1.9e-42, Sum P(5) = 1.9e-42
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 1697 EKELKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACK 1752
E L + + ++C CR P + MI C C EWYH C+K+ L E + C C
Sbjct: 1085 EGRLTIRKKKGCIFCFCRLP-ESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICD 1143
Query: 1753 PQAEE---SSTPQNVDGGRTNAEFLEPKT-P-SPKHTNSRKKLRKAEPGLAQKMLAIANN 1807
+ E S+ P+ D + + + K P PK T + +K+ Q+M A+A+N
Sbjct: 1144 YRVEIPRLSNRPKLED---LQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHN 1200
Score = 88 (36.0 bits), Expect = 1.9e-42, Sum P(5) = 1.9e-42
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 42 DPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSK 101
DP +++ + G K++PP+ W+ P LD G+F F +K Q +++ C +
Sbjct: 68 DPFKFLLDNWHTIFKNGAIKLLPPEGWQIPVVLDQGAFEFQSKRQCLNK------GCLNY 121
Query: 102 TFELEYSRFLK---EHVGTKLNKKVFFEGEELDLCKLFNAAKRF 142
+Y + LK E G +D +L NA +F
Sbjct: 122 EKNYDYFKKLKAFHESRGLYFYHPPIIGNRPVDFLRLRNAISKF 165
Score = 83 (34.3 bits), Expect = 1.2e-41, Sum P(5) = 1.2e-41
Identities = 26/102 (25%), Positives = 44/102 (43%)
Query: 1453 CMCCESDSKELEFLI-CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGG 1511
C+ C E +I C C + YH +CL+ ++ E + CP C Y + +
Sbjct: 1096 CIFCFCRLPESGVMIECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDY--RVEIPRLSN 1153
Query: 1512 SPLRFGGKRSDLRMLIELLSDSEFFCRGIEAKDVLQEVVDVA 1553
P K DL+ L + D + + + L++VVD+A
Sbjct: 1154 RP-----KLEDLQSLYK---DVKLLPFQPKETETLRKVVDLA 1187
Score = 72 (30.4 bits), Expect = 1.5e-38, Sum P(6) = 1.5e-38
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 1414 GTSVGDKN----SLLGLLQKIKQSVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICS 1469
GT++ D N S + L++ K + + + + S C+C E S F+ C+
Sbjct: 1317 GTNISDANNKNESHVSLMKNWKLGSPAFVTLVKEKNSS-----CLCGEEFSPRDSFIDCT 1371
Query: 1470 ACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
C+ +H C+ + + CP C
Sbjct: 1372 ICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
Score = 69 (29.3 bits), Expect = 1.2e-41, Sum P(5) = 1.2e-41
Identities = 24/98 (24%), Positives = 40/98 (40%)
Query: 1711 CICRKPYDEK-AMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQA---------- 1755
C+C + + + + I C C+ +H DCV L + A + + C C Q+
Sbjct: 1355 CLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPICMEQSGGIYPWQLRP 1414
Query: 1756 EESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1793
P ++ G E +PK S +T + K KA
Sbjct: 1415 RNGMHPDHISGFSKEVE-TDPKLGSSGYTLNNSKFDKA 1451
Score = 66 (28.3 bits), Expect = 1.2e-41, Sum P(5) = 1.2e-41
Identities = 77/379 (20%), Positives = 148/379 (39%)
Query: 1084 WEERAADILIH--KAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLK--NSELFL 1139
W R +L K Q+ + ++ ++ + P +++ + A SW+ N L +
Sbjct: 711 WTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKV 770
Query: 1140 ASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 1199
AS L + + S K + K + C+ +N + Q A
Sbjct: 771 ASLKRKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMAFTCQEIEN----MKQKA 826
Query: 1200 RCLLD-KDDIGDGLSNSL-VSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWC 1257
LL+ ++ + + S L + ++L+T E LGF E+ +Q W
Sbjct: 827 FDLLEFRNRLINSFSGPLDKNTCQRLLTEAEL-------LGFTIPELGIIQKYLIQFEWL 879
Query: 1258 KKALSFLSVSPSLEDVESLMA--VAEGLSTRCFSSMLWNSLIHGVK--WLKRALEVISAP 1313
SF + + D+E L+ V+ G+ M++ + G W + + +S
Sbjct: 880 DMFYSFETTRTTDSDLERLITYGVSAGIPEDN-DYMIFAKAMKGRAEIWENQVYDTLSKS 938
Query: 1314 CKFKRCKLSDV-EEVLAGCKGINFSFPVVIGELTSAIQ-KHKLWQEQVHQFFNLKCAQQS 1371
KLS + +E + C F V+G L +A + K+K+ + ++
Sbjct: 939 -NISYDKLSLLRDEAMNLCVNKEL-FSKVVGILNNAEEIKNKI------ATLCERSQEKD 990
Query: 1372 WSLMLQLKELGEA--AAFDCPELEK---VLSKV-DKVENWKQRCKEIVGTSVGDKNSLLG 1425
++L + E+ EA +A P L + L K+ D V W +R K + G + L
Sbjct: 991 FALRPSIDEVKEALASAEKLPILSESTVTLQKMYDVVLEWIRRGKRLFGKANAPLEILGQ 1050
Query: 1426 LLQKIKQSVHRSLYIYNKP 1444
L +++ SL + ++P
Sbjct: 1051 HLDYVEKRNSASLSLNDRP 1069
Score = 57 (25.1 bits), Expect = 1.9e-42, Sum P(5) = 1.9e-42
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 1006 ELNCILKEGASLRIQVDDLPLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAV 1061
+L ++ G S I D+ ++ + K + DT + D + + EA+
Sbjct: 894 DLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAM 953
Query: 1062 ILQIEREKLFIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEV 1121
L + +E LF + G+L A EE I A +CE R+ + F + PS+DEV
Sbjct: 954 NLCVNKE-LFSKVVGILNNA---EEIKNKI----ATLCE-----RSQEKDFALRPSIDEV 1000
Query: 1122 QNEISTAK 1129
+ +++A+
Sbjct: 1001 KEALASAE 1008
Score = 56 (24.8 bits), Expect = 1.3e-40, Sum P(5) = 1.3e-40
Identities = 42/210 (20%), Positives = 84/210 (40%)
Query: 905 VLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFT 964
VL+K+ + + E + + + R R + G + T + LL E
Sbjct: 801 VLFKVLQTSRSMAFTCQEIENMKQKAFDLLEFRNRLINSFSGPLDKNTCQRLLTEAELLG 860
Query: 965 VNMPELELLKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDDL 1024
+PEL ++++Y W+ D+ + + + ++ L + G S I D+
Sbjct: 861 FTIPELGIIQKYLIQ-FEWL----DMFYSFETTRTTDSDLERL---ITYGVSAGIPEDND 912
Query: 1025 PLVEVELKKAHCREKALKACDT----KMPLDFIRQVTAEAVILQIEREKLFIDLSGVLAA 1080
++ + K + DT + D + + EA+ L + +E LF + G+L
Sbjct: 913 YMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSLLRDEAMNLCVNKE-LFSKVVGILNN 971
Query: 1081 AMRWEERAADILIHKAQMCEFEDIIRASQD 1110
A + + A L ++Q +F +R S D
Sbjct: 972 AEEIKNKIAT-LCERSQEKDFA--LRPSID 998
Score = 52 (23.4 bits), Expect = 1.9e-42, Sum P(5) = 1.9e-42
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 828 LQNYAEEARSLIQ-------EINAALSACSK--ISELELLYSRASGLPICIVESEKLSQR 878
L N AE SLI+ + + LS K + L+ L A + E+ L
Sbjct: 694 LSNLAERFVSLIRGPEEWTNRLRSVLSTSPKPQLKVLKSLLVDAEKAMLTTPETVNLRDF 753
Query: 879 ISSAKVWRDSVRKC--ISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESC 936
+ +A W DSV +C +++ + L+K + ++ ++ +L K++ + S
Sbjct: 754 VQNANSWIDSVNECLKVASLKRKKDKKPPLFKAHDHWNNTS-NLKDSAVLFKVLQTSRSM 812
Query: 937 RARCSEALRGSMSLKTVELL 956
C E +M K +LL
Sbjct: 813 AFTCQEI--ENMKQKAFDLL 830
Score = 51 (23.0 bits), Expect = 1.5e-38, Sum P(6) = 1.5e-38
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 1195
+LE L+ L K L KE L KV++ +++ +L
Sbjct: 1156 KLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQAL 1197
Score = 50 (22.7 bits), Expect = 2.7e-41, Sum P(6) = 2.7e-41
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 950 LKTVELLLQELGDFTVNMPELELLKQYHSDAIFWIARLNDIL--VNINGRKDQ 1000
LK ++ LL + + PE L+ + +A WI +N+ L ++ +KD+
Sbjct: 727 LKVLKSLLVDAEKAMLTTPETVNLRDFVQNANSWIDSVNECLKVASLKRKKDK 779
Score = 50 (22.7 bits), Expect = 5.2e-40, Sum P(5) = 5.2e-40
Identities = 45/208 (21%), Positives = 85/208 (40%)
Query: 890 RKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMS 949
R + N ++ + +L +EA L +PE ++ K + Q E + +
Sbjct: 833 RNRLINSFSGPLDKNTCQRLLTEAELLGFTIPELGIIQKYLIQFEWL-----DMFYSFET 887
Query: 950 LKTVELLLQELGDFTVN--MPE----LELLKQYHSDAIFWIARLNDILVNINGRKDQHNV 1003
+T + L+ L + V+ +PE + K A W ++ D L N D+ ++
Sbjct: 888 TRTTDSDLERLITYGVSAGIPEDNDYMIFAKAMKGRAEIWENQVYDTLSKSNISYDKLSL 947
Query: 1004 I-DE-LN-CILKEGASLRIQVDDLPLVEVELKKAH-CREKALKACDTKMPLDFIRQVTAE 1059
+ DE +N C+ KE S + + + E++ K A C K + +D +++ A
Sbjct: 948 LRDEAMNLCVNKELFSKVVGILN-NAEEIKNKIATLCERSQEKDFALRPSIDEVKEALAS 1006
Query: 1060 AVILQIEREKLFIDLSGVLAAAMRWEER 1087
A L I E + L + + W R
Sbjct: 1007 AEKLPILSEST-VTLQKMYDVVLEWIRR 1033
Score = 50 (22.7 bits), Expect = 2.8e-36, Sum P(4) = 2.8e-36
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 846 LSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNK---CPAAIE 902
LS K+ +L+ LY LP E+E L + + A +R ++ N A +
Sbjct: 1151 LSNRPKLEDLQSLYKDVKLLPFQPKETETLRKVVDLASKFRQEMQALAHNPFGLTMAEVP 1210
Query: 903 IDVLYKLESEALDLKIDVPETDM 925
+ Y + E ++ + V ET++
Sbjct: 1211 LARFYLRKMEGAEILL-VDETNL 1232
Score = 49 (22.3 bits), Expect = 0.00057, Sum P(5) = 0.00057
Identities = 27/108 (25%), Positives = 45/108 (41%)
Query: 1136 ELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSL 1195
ELF S+ A + + + L LE L + + + KE LEK + E W H +L
Sbjct: 364 ELFYWSSLAESNSGFAPLELEGLSQAYTSTIQSSLPSKEVFPLEKY--SSEPWNLH--NL 419
Query: 1196 LQDARCLLDKDDIGDGLSNSLVSKIE-QLITSMESAANCGLSLGFDFH 1242
+ CL + D LS+ ++++ ++ LS G H
Sbjct: 420 PFENPCLFNYS-FSD-LSSLTITRLSIGMVFYTHGWTKSSLSTGLLHH 465
Score = 45 (20.9 bits), Expect = 6.5e-36, Sum P(6) = 6.5e-36
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 1678 SLDKVFELIAEGENLPVYLE 1697
S+D+V E +A E LP+ E
Sbjct: 996 SIDEVKEALASAEKLPILSE 1015
Score = 40 (19.1 bits), Expect = 5.3e-39, Sum P(5) = 5.3e-39
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 1393 EKVLSKVDKVENWKQRCKEIVGTS 1416
E+ +S + E W R + ++ TS
Sbjct: 699 ERFVSLIRGPEEWTNRLRSVLSTS 722
Score = 40 (19.1 bits), Expect = 6.5e-36, Sum P(6) = 6.5e-36
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 1620 LEGLTKPTIGQIQNYL 1635
L G T P +G IQ YL
Sbjct: 858 LLGFTIPELGIIQKYL 873
Score = 39 (18.8 bits), Expect = 5.0e-37, Sum P(6) = 5.0e-37
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKD-HYRQKLMEL 1656
+RV + +L +P + +Q+ K+ L+ PK+ +K+++L
Sbjct: 1144 YRVEIPRLSN---RPKLEDLQSLYKDVKLLPFQPKETETLRKVVDL 1186
Score = 37 (18.1 bits), Expect = 8.0e-37, Sum P(6) = 8.0e-37
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 1264 LSVSPSLEDVESL 1276
LS P LED++SL
Sbjct: 1151 LSNRPKLEDLQSL 1163
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 346 (126.9 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 113/394 (28%), Positives = 185/394 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F + ++E+++W +VE +V V G +DT+ +G
Sbjct: 793 GRSVSLTTFYRTARNIMNMCFTK-EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHG 850
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 851 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 898
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P +E + V+ + L + P L +
Sbjct: 899 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAAEENKLDDVVHTLLQA--NGTPGLEML 955
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 956 ESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1015
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ A S E+LL +A ++ + P L LL + E R +L
Sbjct: 1016 GFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQL 1075
Query: 601 WRKGI----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ ST M +K P +++ E + C IC+ YLS V
Sbjct: 1076 YEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVV 1135
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L ++YR+ ++ L
Sbjct: 1136 F-CLECALRHVEKQKSCRGLKMMYRYDEEQIISL 1168
Score = 194 (73.4 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P+ P+ EF DPL YI +RA+ E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 534 PILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 592
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L R + ++ + LK G +++ G ELDL GG +V
Sbjct: 593 LGRRWGPNVQRLACIK--KHLKSQ-GITMDELPLIGGCELDLACFVQLINEMGGMQQVTD 649
Query: 151 EKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
KKW ++ +R + D A+ CQ KL KEV
Sbjct: 650 LKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEV 699
Score = 51 (23.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 44/195 (22%), Positives = 75/195 (38%)
Query: 1357 EQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS 1416
E VH F + + ++K A F +EK+L ++ E K+ G +
Sbjct: 1003 ETVH-FATTQWTSMGFKTAKEMKRRRIAKPFS---MEKLLYQIATAEAKKEN-----GPT 1053
Query: 1417 VGDKNSLLGLLQKIKQSVHRSLY---IYNKP-HGSV-SMTLCMCCESDSKELEFLICSA- 1470
+ +SLLG L+ + R LY +++ +GS S + M + ++ L S
Sbjct: 1054 LSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSER 1113
Query: 1471 -CKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIEL 1529
C+ C HL C V N + C C E G + + R D +I L
Sbjct: 1114 RCQICQHL-CYLSMVVQENENVVF-CLECALRHVEKQKSCRGLKMMY---RYDEEQIISL 1168
Query: 1530 LSDSEFFCRGIEAKD 1544
++ C + K+
Sbjct: 1169 VNQ---ICGKVSGKN 1180
Score = 41 (19.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN 1657
K GL+ + K+ +R KL E++
Sbjct: 732 KNGLINGVVHKNGFRNKLKEVD 753
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 346 (126.9 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 113/394 (28%), Positives = 185/394 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F + ++E+++W +VE +V V G +DT+ +G
Sbjct: 806 GRSVSLTTFYRTARNIMNMCFTK-EPTVAEVEQEYWRLVEQKDSHVAVHCGK-VDTNTHG 863
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 864 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 911
Query: 426 FSAFCW-HFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LF 483
FS CW ++H Y ++Y H G WY +P +E + V+ + L + P L +
Sbjct: 912 FSTSCWSRDQNHLPY-IDYLHTGADCIWYCIPAAEENKLDDVVHTLLQA--NGTPGLEML 968
Query: 484 QLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPH 543
+ M++P +L + G+ V+ +Q+ G FV+ FP S+ + G + +E V+FA W
Sbjct: 969 ESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSM 1028
Query: 544 GGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKR--ELL-RVYTKERMWRERL 600
G A ++ A S E+LL +A ++ + P L LL + E R +L
Sbjct: 1029 GFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDTELRQRRQL 1088
Query: 601 WRKGI----------IKSTPMGPRKCP-EYVGTE-EDPTCIICRQYLYLSAVACRCRPAA 648
+ G+ ST M +K P +++ E + C IC+ YLS V
Sbjct: 1089 YEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVV 1148
Query: 649 FVCLE-HWEHLCECKT-RKLHLLYRHTLAELYDL 680
F CLE H+ + K+ R L ++YR+ ++ L
Sbjct: 1149 F-CLECALRHVEKQKSCRGLKMMYRYDEEQIISL 1181
Score = 194 (73.4 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P+ P+ EF DPL YI +RA+ E+YG+C+++PP W+P L+ F T+ Q IH+
Sbjct: 547 PILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 605
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L R + ++ + LK G +++ G ELDL GG +V
Sbjct: 606 LGRRWGPNVQRLACIK--KHLKSQ-GITMDELPLIGGCELDLACFVQLINEMGGMQQVTD 662
Query: 151 EKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
KKW ++ +R + D A+ CQ KL KEV
Sbjct: 663 LKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEV 712
Score = 51 (23.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 44/195 (22%), Positives = 75/195 (38%)
Query: 1357 EQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCKEIVGTS 1416
E VH F + + ++K A F +EK+L ++ E K+ G +
Sbjct: 1016 ETVH-FATTQWTSMGFKTAKEMKRRRIAKPFS---MEKLLYQIATAEAKKEN-----GPT 1066
Query: 1417 VGDKNSLLGLLQKIKQSVHRSLY---IYNKP-HGSV-SMTLCMCCESDSKELEFLICSA- 1470
+ +SLLG L+ + R LY +++ +GS S + M + ++ L S
Sbjct: 1067 LSTISSLLGELRDTELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSER 1126
Query: 1471 -CKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGGSPLRFGGKRSDLRMLIEL 1529
C+ C HL C V N + C C E G + + R D +I L
Sbjct: 1127 RCQICQHL-CYLSMVVQENENVVF-CLECALRHVEKQKSCRGLKMMY---RYDEEQIISL 1181
Query: 1530 LSDSEFFCRGIEAKD 1544
++ C + K+
Sbjct: 1182 VNQ---ICGKVSGKN 1193
Score = 41 (19.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN 1657
K GL+ + K+ +R KL E++
Sbjct: 745 KNGLINGVVHKNGFRNKLKEVD 766
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 361 (132.1 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 115/397 (28%), Positives = 185/397 (46%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R+A F + ++E+ +W IVE +V V YG +DT+ +G
Sbjct: 887 GRSVSLTTFYRIARNTMMMYFNKEPGA-AEVEQDYWRIVEQRDCHVAVHYGK-VDTNTHG 944
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 945 SGFP-VGKSEP----------FSKHGWNLTVLPNNSGSILRHLGA-VPGVTIPWLNIGMV 992
Query: 426 FSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LFQ 484
FS CW + + ++Y H G WYS+P E +KV+ + L + P L + +
Sbjct: 993 FSTSCWSQDQNRLPYIDYLHTGADCIWYSIPAEEKTKLDKVVHTLLQA--NGTPGLEMLE 1050
Query: 485 LVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
M++P VL G+ V+ +Q+ G FV+ FP ++ + G + +E V+FA W+ G
Sbjct: 1051 KNVMISPEVLCREGIKVHRTVQQSGQFVVVFPGAFVSRVCCGYSVSETVHFATPQWMNLG 1110
Query: 545 GFGADLYQQYHKAAVLSHEELLCVVAKSDLD-------SKVSPYLKRELLRVYTKERMWR 597
A + A S E+LL +A ++ S +S LK +L + K+R
Sbjct: 1111 YEAAKDLKCRRIAKPFSMEKLLYQIATAEAKRENRLVLSTISSLLK-DLRNIEMKQR--- 1166
Query: 598 ERLWRKGIIKS----------TPMGPRKCP-EYVGTEE-DPTCIICRQYLYLSAVACRCR 645
+ L+ G++ S +P RK P +++ E + C +C+ YLS V
Sbjct: 1167 QELYEAGLLSSARYCTHDHNQSPADTRKKPRKWLALESSERRCQMCQHLCYLSMVVQENE 1226
Query: 646 PAAFVCLEHWEHLCEC--KTRKLHLLYRHTLAELYDL 680
F CLE H E R L ++YR+ ++ L
Sbjct: 1227 NVVF-CLECALHYVEKHKNCRGLKMMYRYDEEQINSL 1262
Score = 159 (61.0 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
P++ P+ EF+DPL Y+ R + E G+C+++PP W+P L+ F T+ Q IH+
Sbjct: 608 PIFKPSSREFQDPLVYLDSFREQVESCGLCRVLPPTDWRPECKLN-DEMRFVTQVQRIHK 666
Query: 91 LQAR------SAACDSKTFELE-YSRFLKEHVGTKLNKKVF------FEGEELDLCKLFN 137
L R AC K + + S +G F G E+DL +
Sbjct: 667 LGRRWGPNVQKLACIKKHLKSQGISMDQPPVIGKSFKSSAFRSAFVCIGGCEVDLARFSE 726
Query: 138 AAKRFGGYDKVVKEKKWGEVFRFVRSNRKISD 169
GG +V+ KKW + +R + D
Sbjct: 727 LVCDLGGMQQVMDLKKWSRLADLLRIPKSAQD 758
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 346 (126.9 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 118/425 (27%), Positives = 188/425 (44%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
GK +++ +F R A F S ++EK++W +V+ +V V G +DT +G
Sbjct: 754 GKSFSLTTFFRAARNTMNMCF-SKEPDTAEVEKEYWRLVDEKESHVAVHCGR-VDTKTHG 811
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNLN L GSILR + + GV +PWL +GM+
Sbjct: 812 SGFP-VGKSEP----------FSKHGWNLNVLSNNSGSILRHLGA-VPGVTIPWLNIGMV 859
Query: 426 FSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL-LFQ 484
FS CW + + ++Y H G WY +P E +KV+ + L + P L + +
Sbjct: 860 FSTSCWCRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKVVHTLLQA--NGTPGLEMLE 917
Query: 485 LVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
M++P VL GV VY +Q G F++ FP ++ A G + +E ++FA W+ G
Sbjct: 918 RNIMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWMKLG 977
Query: 545 GFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLR-VYTKERMWRERLWRK 603
A ++ S E+LL + + D+K L R + E R L+
Sbjct: 978 YEAAKDLKRRRIEEPFSTEKLLYQITTCERDNKQLMTAVSSLFRDLRDAEIRQRRELFEA 1037
Query: 604 GIIKSTPMG-----P---RKCPEYVGTEE--DPTCIICRQYLYLSAVACRCRPAAFVCLE 653
G+ S G P RK TE+ D C +C+ YLS V F CLE
Sbjct: 1038 GLRLSARYGTNCESPTERRKQQRSRFTEDTADRRCQVCQHLCYLSMVVHESDNVVF-CLE 1096
Query: 654 -HWEHLCECKT-RKLHLLYRHTLAELYDLFLTVDRXXXXXXXXXXXLRRQISSSNRPTTL 711
++ + ++ R L +++R++ +L L V+R +R + S P
Sbjct: 1097 CALRYIQKRRSPRGLKMMFRYSEEQLNSL---VNRVCGRTLDKAGVKQRSVGPSKTPAKR 1153
Query: 712 TKKVK 716
+ + K
Sbjct: 1154 SPRNK 1158
Score = 172 (65.6 bits), Expect = 3.9e-39, Sum P(2) = 3.9e-39
Identities = 48/170 (28%), Positives = 71/170 (41%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+YP EF DPL ++ R +AE +G+ ++VPP W+P L F + Q +H+
Sbjct: 503 PVFYPNTHEFHDPLTFMELARGQAEAFGLFRVVPPAGWRPECKLK-EEMRFVSYVQHVHK 561
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L R + + R L+ G + + G ELDL + F GG +V
Sbjct: 562 LGRRWGPNVQRLACIR--RHLRTQ-GINMEEPPLIGGCELDLARFFQIINEMGGMQQVTD 618
Query: 151 EKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
K WG + + R D A+ CQ +L KEV
Sbjct: 619 LKTWGRLADLLGIPRSAQDRLAKLQEAYCQYLLSYDSLTPAQRAQLEKEV 668
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 1456 CESDSKELEFLICSACKD 1473
CE D+K+L + S +D
Sbjct: 1005 CERDNKQLMTAVSSLFRD 1022
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 398 (145.2 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 108/310 (34%), Positives = 156/310 (50%)
Query: 304 VPGKRY--TVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDT 361
VPG + + FR R +K+R R + + + E ++ VE +
Sbjct: 178 VPGSAFGEPEDHFRHF--RQRKRRGRGFYQRKTENNDPSGKNGEKSSPEVEKAPLASTSL 235
Query: 362 SIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLY 421
S S + D E W + NS WNL + + GS+ R + +I GV P +Y
Sbjct: 236 SSQDSSKQKNMDIVDEMEGTAGW-KLSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVY 294
Query: 422 LGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDL 481
+GMLFS F WH EDH +SMNY H G PK WY+VP A FE+V+R + Q
Sbjct: 295 IGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPCDYALDFEEVIRKNSYGRNIDQLAA 354
Query: 482 LFQL---VTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPA 538
L QL T+++P ++V +G+P ++Q PG FV+TFPRSYH GF+ G NC EA NF
Sbjct: 355 LTQLGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTP 414
Query: 539 DWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMW-R 597
WL A + +LSH++LL ++ S + S+V P R LL R+ R
Sbjct: 415 QWLNVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFV-SRV-P---RSLLPGGRSSRLRDR 469
Query: 598 ERLWRKGIIK 607
+R R+ ++K
Sbjct: 470 QREEREFLVK 479
Score = 123 (48.4 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPP 65
PV+ PT+ EF DP+ YI KI EA +GICKI+PP
Sbjct: 17 PVFRPTDTEFADPIAYISKIEKEASAFGICKIIPP 51
Score = 41 (19.5 bits), Expect = 3.6e-38, Sum P(3) = 3.6e-38
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 1768 RTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIAN 1806
+T++ ++ P+ +HT ++L ++ GL K L I +
Sbjct: 640 KTSSRYIRPRIFCLEHTIELQRLLQSRGGL--KFLVICH 676
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 261 (96.9 bits), Expect = 7.8e-37, Sum P(2) = 7.8e-37
Identities = 53/158 (33%), Positives = 85/158 (53%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD----KDSFGF 303
IC+ C G + +L CD C+ +H++CL PPL +PRG W C +C+ ++ ++FGF
Sbjct: 271 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGF 330
Query: 304 VPG-KRYTVESFRRVADRAKKKRFRSG--SASRVQMEKKFWEIVEGAAGNVEVMYGSDLD 360
+ Y+++SF +AD K F +EK+FW +V +V V YG+D+
Sbjct: 331 EQATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIH 390
Query: 361 TSIYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLP 398
+ +GSGFP + +++ EY S WNLN +P
Sbjct: 391 SKEFGSGFP--VSNSKQNLSPEE-KEYATSGWNLNVMP 425
Score = 217 (81.4 bits), Expect = 7.8e-37, Sum P(2) = 7.8e-37
Identities = 48/127 (37%), Positives = 75/127 (59%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ EF+DPL YI KIR AE+ GICKI PP W+PPFA+++ +F F + Q +++
Sbjct: 15 PVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNE 74
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L+A++ + + ++F E G+ L K E + LDL L GGY+ + K
Sbjct: 75 LEAQTRV--KLNYLDQIAKFW-EIQGSSL-KIPNVERKILDLYSLSKIVIEEGGYEAICK 130
Query: 151 EKKWGEV 157
+++W V
Sbjct: 131 DRRWARV 137
Score = 84 (34.6 bits), Expect = 9.1e-18, Sum P(2) = 9.1e-18
Identities = 22/74 (29%), Positives = 32/74 (43%)
Query: 1443 KPHGS---VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPY 1497
K H S + +C C ++ + L C C D YH+ CL P E+ R + CP
Sbjct: 259 KNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG---IWRCPK 315
Query: 1498 CQYFESESVSQ-FG 1510
C E + + FG
Sbjct: 316 CILAECKQPPEAFG 329
Score = 63 (27.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1696 LEKELKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
L K S + C +C + ++ ++ C CD+ YHI C+ L PEI
Sbjct: 257 LRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCL-LPPLPEI 306
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 356 (130.4 bits), Expect = 8.2e-36, Sum P(3) = 8.2e-36
Identities = 93/294 (31%), Positives = 145/294 (49%)
Query: 323 KKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPESVDAN 382
KK + S +++E +W +VE Y +D+ S + R +
Sbjct: 142 KKCGKKSQLSALEIETLYWRATVDKPFSVE--YANDMPGSAFIPLSLAAARRRESGGEGG 199
Query: 383 VWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMN 442
E + WN+ + + +GS+L+ + I GV P +Y+ M+FS F WH EDH +S+N
Sbjct: 200 TVGE---TAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLN 256
Query: 443 YHHWGDPKCWYSVPGSEAGAFEKVMR-----SSLPDLFDAQPDLLFQLVTMLNPSVLVEN 497
Y H G K WY VP A AFE+V+R L L L + T+++P V V+
Sbjct: 257 YLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFST--LGEKTTVMSPEVFVKA 314
Query: 498 GVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKA 557
G+P ++Q PG FV+TFP +YH+GF+ G N EA N A +WL A +
Sbjct: 315 GIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYP 374
Query: 558 AVLSHEELLC--VVAK-SDLDSKVSPYLKRELLRVYTKERMWRERLWRKGIIKS 608
++SH +LL V+A S + + ++P K R+ K R ERL +K +++
Sbjct: 375 PMVSHLQLLYDFVLALGSRVPTSINP--KPRSSRLKDKARSEGERLTKKLFVQN 426
Score = 121 (47.7 bits), Expect = 8.2e-36, Sum P(3) = 8.2e-36
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPP 65
P + PT EF+DP+ YI KI EA RYGICKI+PP
Sbjct: 21 PEFRPTLAEFQDPIAYILKIEEEASRYGICKILPP 55
Score = 64 (27.6 bits), Expect = 8.2e-36, Sum P(3) = 8.2e-36
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 1159 KDLVSQSKFLKIS--LKEQTEL-EKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNS 1215
+DL S S + +S LK+ + EK + CER +NH +S +D + L D +++
Sbjct: 478 EDLSSDSVVVDLSNGLKDTVSVKEKFTSLCERSRNHLASTEKDTQETLS--DAERRKNDA 535
Query: 1216 LVSKIEQLITSMESAANCGLSLGFDFHEISELQNACS 1252
V+ +Q + S CG+ L FD I + + A +
Sbjct: 536 AVALSDQRLFS---CVTCGV-LSFDCVAIVQPKEAAA 568
Score = 41 (19.5 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 21/91 (23%), Positives = 38/91 (41%)
Query: 833 EEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKC 892
++ARS + + L + I ELL S G P+ ++ S IS R
Sbjct: 409 DKARSEGERLTKKLFVQNIIHNNELLSSLGKGSPVALLPQS--SSDISVCSDLRIGSHLI 466
Query: 893 ISNKCPAAIEIDVLYKLESEALDLKIDVPET 923
+ + P ++ + L +S +DL + +T
Sbjct: 467 TNQENPIQLKCEDLSS-DSVVVDLSNGLKDT 496
Score = 38 (18.4 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 699 RRQISSSNRPTTLTKKVKGVRVTMSQLVEQWLS 731
+RQ S+ + TK V+ R T + ++++ S
Sbjct: 1135 KRQTRSTAKRIAKTKTVQSSRDTKGRFLQEFAS 1167
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 361 (132.1 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 83/229 (36%), Positives = 116/229 (50%)
Query: 322 KKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDL--DTSIYGSGFPRVCDHRPESV 379
KKK R G R+ KK+ ++E Y + IYG+ +
Sbjct: 89 KKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSHPGNPPIYGA-----------DI 137
Query: 380 DANVWNEYCNSPWNLNNLPKLKGSILRMVHHN----ITGVMVPWLYLGMLFSAFCWHFED 435
+++ E WNL +L G+IL ++ I GV P+LY GM + F WH ED
Sbjct: 138 SGSLFEE-STKQWNLGHL----GTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTED 192
Query: 436 HCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495
YS+NY H+G+PK WY VP E++ R PD+ L V +++P+VL
Sbjct: 193 MDLYSINYLHFGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLK 252
Query: 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
ENG+P + QE G F++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 253 ENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 90 (36.7 bits), Expect = 2.3e-35, Sum P(2) = 2.3e-35
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWK 69
+YPT +EF D Y+ + ++ A + G+ K++PPK WK
Sbjct: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKVIPPKEWK 55
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 345 (126.5 bits), Expect = 4.5e-34, Sum P(4) = 4.5e-34
Identities = 65/153 (42%), Positives = 87/153 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WNL +L ++ + + I GV P+LY GM + F WH ED YS+NY H G+PK
Sbjct: 152 WNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKT 211
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY VP E++ R P L V +++P+VL ENG+P + QE G F
Sbjct: 212 WYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEF 271
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 272 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 304
Score = 99 (39.9 bits), Expect = 4.5e-34, Sum P(4) = 4.5e-34
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 32 VYYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWK 69
+++PT++EF D +YI + ++ A R G+ KI+PPK WK
Sbjct: 20 IFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK 58
Score = 44 (20.5 bits), Expect = 4.5e-34, Sum P(4) = 4.5e-34
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1768 RTNAEFLEPKTPSPKHTNSRKKL---RKAEPGLAQ 1799
R + +EP+ P+ + +++K++ R+A GL Q
Sbjct: 342 RAVVDHMEPRVPASQELSTQKEVQLPRRAALGLRQ 376
Score = 40 (19.1 bits), Expect = 4.5e-34, Sum P(4) = 4.5e-34
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 732 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 768
CS + FS DA+ +L+ LW + AV D
Sbjct: 310 CSCGEARVTFSMDAFVRILQPERYDLWKRGQDRAVVD 346
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 347 (127.2 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 64/153 (41%), Positives = 88/153 (57%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L ++ + + I GV P+LY GM + F WH ED YS+NY H+G PK
Sbjct: 149 WNVGHLGTIQDLLEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKT 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY+VP E++ R P L V +++P+VL ENG+P + QE G F
Sbjct: 209 WYAVPPEHGRRLERLARELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 95 (38.5 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 32 VYYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAIH 89
++ PT++EF D +YI + ++ A R G+ K++PPK W+ + D + + T Q +
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWRARQSYDNISNILIATPLQQVV 76
Query: 90 QLQA 93
QA
Sbjct: 77 SGQA 80
Score = 43 (20.2 bits), Expect = 5.9e-34, Sum P(3) = 5.9e-34
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 732 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRDMVNKLI 774
CS + FS DA+ +L+ LW + AV D ++
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYELWKRGQDQAVVDHTETMV 349
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 281 (104.0 bits), Expect = 5.9e-34, Sum P(5) = 5.9e-34
Identities = 78/291 (26%), Positives = 132/291 (45%)
Query: 385 NEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYH 444
N Y N PWNL + K S LR G++ + LG + W + + M+YH
Sbjct: 481 NAYYNDPWNLYFIHFSKLSPLRFTP---PGILTSTISLGQPLTCQGWQRDSMSLFGMHYH 537
Query: 445 HWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSV 504
H+G + WY +P + +EK++ P +P+ L + +L S+L+ NG+ V +
Sbjct: 538 HYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQEKPETLIKSKILLPISMLISNGIQVLTF 597
Query: 505 LQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLP--HGGFGADLYQQYHKAAVLSH 562
+Q FVIT P +Y+ + G + +E+V FA +W+ H ++Y+ H +A S
Sbjct: 598 VQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENSFNMYKNLHISAPFSL 657
Query: 563 EELLCVVAKSDLDSKV-SPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVG 621
+ +L +A + LD V S Y L K+R+ RE R K P+ P +
Sbjct: 658 DHIL--LANATLDKTVHSAYW----LMTCLKDRVDRELTLRNEFRKRHPL-LTWIPTPLE 710
Query: 622 TEEDPTCIICRQYLYLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRH 672
+ C C+ + YL+++ + CL H + L +L R+
Sbjct: 711 SSV-MACAFCKTFAYLASIEEK-NGTKTACLSHKDECFPNTDSDLTVLVRY 759
Score = 118 (46.6 bits), Expect = 7.1e-33, Sum P(4) = 7.1e-33
Identities = 42/150 (28%), Positives = 67/150 (44%)
Query: 1624 TKPTIGQIQNYLKEGLLMNISPKDH-YRQKLM----ELNRIGSQWADVAKKVVLDSGALS 1678
++PTI + + L E + P+++ QKL+ E R G + A L+
Sbjct: 1075 SRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVRRGKRLFGKAN-APLEIFNQH 1133
Query: 1679 LDKVFE-----LIAEGENLPVYLEKELKSLRARS---MLYCICRKPYDEKAMIACYQCDE 1730
L+ V + ++ EG + P ++ E + YC CR+P + MI C C E
Sbjct: 1134 LEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSDPSDFHYCFCRQP-EAGMMIECELCHE 1192
Query: 1731 WYHIDCVKL----LSAPEIYICAACKPQAE 1756
WYH C+K+ L A E +IC C + E
Sbjct: 1193 WYHAKCMKMSKKKLRADEKFICPICDYRVE 1222
Score = 94 (38.1 bits), Expect = 5.9e-34, Sum P(5) = 5.9e-34
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 1711 CICRKPYD-EKAMIACYQCDEWYHIDCVKL----LSAPEIYICAACKPQAEESSTPQNVD 1765
C+CR+P+ + C+ C EW+H +CV L +S Y C C + E P N
Sbjct: 1457 CLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYACPDCCSK-EGKLYPWNTR 1515
Query: 1766 GGRTNAEFL-EPKTPSPKH--TNSRKKLRKAEPGLAQ--KMLAIANNSSVFDCSSGIDNL 1820
T + +L + +PS T + L KA A +L ++N S F S +D +
Sbjct: 1516 PRSTPSVWLSQAYSPSVLQGTTENVAFLNKAFSASANLFDVLPVSNTPSHF---SKMDYV 1572
Query: 1821 WWHNRKP 1827
+RKP
Sbjct: 1573 L-EDRKP 1578
Score = 85 (35.0 bits), Expect = 5.9e-34, Sum P(5) = 5.9e-34
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 806 LDCVNELLGFDPLPCNEPGHLILQNYAEEARSL---IQEI----NAALSACSKISELELL 858
L+ E LG D + P +L+ EA ++ +QE+ N +A + + ++
Sbjct: 782 LENYKEALGSDN---SRPSLKVLKTLLNEAETICCPLQEVSLVRNLVKTAQQWLDKFAII 838
Query: 859 YSRASGLPICIVESEKLS-QRISSAKVWRDSVRKCISNKCPAAI-EIDVLYKLESEALDL 916
+ + S +V+ EK +R S+ +S + + + + I E D+L L EA
Sbjct: 839 FKKKS-----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINEADLLINLVEEAEQF 893
Query: 917 KIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGDFTVNMPELELLKQY 976
D PE + + + R + + S+S + +++E + PEL KQY
Sbjct: 894 TFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGESLQLKTPELLYFKQY 953
Query: 977 HSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEGASLRIQVDD 1023
+ WI N I + + D + ++EL +++ G + + D+
Sbjct: 954 -MEKTEWIDSFNQI----SQKTD--STMEELVELIERGEKIGLTSDN 993
Score = 84 (34.6 bits), Expect = 5.9e-34, Sum P(5) = 5.9e-34
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 35 PTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALDLGSFTFPTK 84
P ++EF L++I + + A + G +++PP +WK P ++ +F F T+
Sbjct: 87 PKKEEFSRGLDFISDLYDQTARKSGAVRVIPPDNWKCPLTINTTTFKFLTR 137
Score = 82 (33.9 bits), Expect = 5.9e-34, Sum P(5) = 5.9e-34
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQY 1500
C C + ++ + + C C + YH +C++ ++ E +ICP C Y
Sbjct: 1174 CFCRQPEAGMM--IECELCHEWYHAKCMKMSKKKLRADEKFICPICDY 1219
Score = 76 (31.8 bits), Expect = 4.9e-33, Sum P(5) = 4.9e-33
Identities = 46/208 (22%), Positives = 83/208 (39%)
Query: 788 HKAENW----SSLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEIN 843
HKA+ W GSD+ + L + LL C P LQ SL++ N
Sbjct: 776 HKADTWLENYKEALGSDNSRPSLKVLKTLLNEAETICC-P----LQEV-----SLVR--N 823
Query: 844 AALSACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAI-E 902
+A + + +++ + S + + ++ +R S+ +S + + + + I E
Sbjct: 824 LVKTAQQWLDKFAIIFKKKS----MVKKEKRKPKRGSATHSHLESPSEEVEDLNSSNINE 879
Query: 903 IDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSEALRGSMSLKTVELLLQELGD 962
D+L L EA D PE + + + R + + S+S + +++E
Sbjct: 880 ADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEEGES 939
Query: 963 FTVNMPELELLKQYHSDAIFWIARLNDI 990
+ PEL KQY + WI N I
Sbjct: 940 LQLKTPELLYFKQY-MEKTEWIDSFNQI 966
Score = 74 (31.1 bits), Expect = 7.8e-33, Sum P(5) = 7.8e-33
Identities = 67/346 (19%), Positives = 144/346 (41%)
Query: 1114 VLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLK 1173
+L + +V A +WL+N + L S + P+ L+ LK L+++++ + L+
Sbjct: 764 LLAAYSKVVERAHKADTWLENYKEALGSDNS-RPS------LKVLKTLLNEAETICCPLQ 816
Query: 1174 EQTELEKVINNCERWQNHASSLLQDARCLLD---KDDIGDGLSNSLVS---KIEQLITSM 1227
E + + ++ ++W + + + + + K G + L S ++E L +S
Sbjct: 817 EVSLVRNLVKTAQQWLDKFAIIFKKKSMVKKEKRKPKRGSATHSHLESPSEEVEDLNSSN 876
Query: 1228 ESAANCGLSL-------GFDFHEIS-ELQNACSTLHWCKKALSFLSVSPSLEDVESLMAV 1279
+ A+ ++L FDF E++ + A S + +KA + S S E+ +++
Sbjct: 877 INEADLLINLVEEAEQFTFDFPEMAVAFEKAESLKIFREKANAMKERSLSYEECLAIVEE 936
Query: 1280 AEGLSTRCFSSMLWNSLIHGVKWLKRALEVISAPCKFKRCKLSDVEEVLAGCK-GINFSF 1338
E L + + + + +W+ + IS +L VE + G K G+
Sbjct: 937 GESLQLKTPELLYFKQYMEKTEWID-SFNQISQKTDSTMEEL--VELIERGEKIGLTSDN 993
Query: 1339 PVVIGELTSAIQKHKLWQEQVHQFFNLKCAQQSWSLMLQLKELGEAAAFDCPELEKVLSK 1398
+ L +K + W +QV + + S S + QLK + + LE++
Sbjct: 994 ENMATALLLK-EKSENWMKQVEGLLSQETL--STSKLFQLKSEANSICINRGLLEQLNEV 1050
Query: 1399 VDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVHRSLYIYNKP 1444
+ K EN+ + ++ + +++ K + S + NKP
Sbjct: 1051 LQKSENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKP 1096
Score = 71 (30.1 bits), Expect = 2.6e-32, Sum P(6) = 2.6e-32
Identities = 57/309 (18%), Positives = 127/309 (41%)
Query: 956 LLQELGDFTVNMPELEL-LKQYHSDAIFWIARLNDILVNINGRKDQHNVIDELNCILKEG 1014
L++E FT + PE+ + ++ S IF N K++ +E I++EG
Sbjct: 886 LVEEAEQFTFDFPEMAVAFEKAESLKIF--------REKANAMKERSLSYEECLAIVEEG 937
Query: 1015 ASLRIQVDDLPLVEVELKKAHCRE---KALKACDTKMPLDFIRQVT-AEAVILQIEREKL 1070
SL+++ +L + ++K + + + D+ M + + + E + L + E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTME-ELVELIERGEKIGLTSDNENM 996
Query: 1071 FIDLSGVLAAAMRWEERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKS 1130
L + + W ++ +L + +++ + + L E NE+ KS
Sbjct: 997 ATALL-LKEKSENWMKQVEGLLSQETLSTSKLFQLKSEANSICINRGLLEQLNEV-LQKS 1054
Query: 1131 WLKNSELFLASAFAVAPASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQN 1190
+++L + A P S +E K ++++S+ L +E T +K++ W
Sbjct: 1055 ENFHTQLVSLISRARDPDYYSRPTIEEAKTVLAESENLTNKPEEYTVAQKLLTQTYEWVR 1114
Query: 1191 HASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITS--MESAANCGLSLGFDFHEISELQ 1248
L A L+ + N + +EQ T+ ++ ++ +G +++ I+
Sbjct: 1115 RGKRLFGKANAPLE-------IFNQHLEFVEQRNTNAMVDEGSDAPFHVGNEYYVIAGSD 1167
Query: 1249 NACSTLHWC 1257
S H+C
Sbjct: 1168 P--SDFHYC 1174
Score = 58 (25.5 bits), Expect = 1.2e-26, Sum P(5) = 1.2e-26
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 1378 LKELGEAAAFD--CPELEKVLSKVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQSVH 1435
+K L +AA P +L + E + EI SV D S LG L
Sbjct: 1392 MKSLAQAAISPNPMPSAHDLLPTSNPAELFTNISPEIKELSV-DSTSTLGGLN------- 1443
Query: 1436 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYIC 1495
S ++ + + SV +C+C + + + C C + +H +C+ + + Y C
Sbjct: 1444 -SSHLVSDQNASV---ICLCRQPFAISDGTVQCHNCLEWFHYECVGLSSDIVSTLSNYAC 1499
Query: 1496 PYC 1498
P C
Sbjct: 1500 PDC 1502
Score = 46 (21.3 bits), Expect = 2.7e-30, Sum P(5) = 2.7e-30
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 1152 LLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 1206
L+ L+ + D + F I ++ L++V+ E ++N S + D L +KD
Sbjct: 1232 LIELQKMVDDIPTLPFQPIEIEL---LKRVVKQAEEFKNKMQSEVCDPTQLSEKD 1283
Score = 43 (20.2 bits), Expect = 2.6e-32, Sum P(6) = 2.6e-32
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 748 TLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGI-----RDCLHKAENWSSLPGSDSE 802
TLL EAE E+ VR++V ++W + + + K E GS +
Sbjct: 803 TLLNEAETICCPLQEVSLVRNLVKT---AQQWLDKFAIIFKKKSMVKKEKRKPKRGSATH 859
Query: 803 KVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRA 862
E+ + NE LI N EEA + A K L++ +A
Sbjct: 860 SHLESPSEEVEDLNSSNINEADLLI--NLVEEAEQFTFDFPEMAVAFEKAESLKIFREKA 917
Query: 863 SGL 865
+ +
Sbjct: 918 NAM 920
Score = 41 (19.5 bits), Expect = 1.8e-29, Sum P(5) = 1.8e-29
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 1104 IIRASQDIFVVLPSLDEVQNEISTAKSWL 1132
++ ++ I L + V+N + TA+ WL
Sbjct: 804 LLNEAETICCPLQEVSLVRNLVKTAQQWL 832
Score = 40 (19.1 bits), Expect = 1.1e-29, Sum P(5) = 1.1e-29
Identities = 12/69 (17%), Positives = 29/69 (42%)
Query: 1624 TKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAKKVVLDSGALSLDKVF 1683
T T+ ++ ++ G + ++ + + L W + + L LS K+F
Sbjct: 970 TDSTMEELVELIERGEKIGLTSDNENMATALLLKEKSENWMKQVEGL-LSQETLSTSKLF 1028
Query: 1684 ELIAEGENL 1692
+L +E ++
Sbjct: 1029 QLKSEANSI 1037
Score = 40 (19.1 bits), Expect = 2.2e-29, Sum P(5) = 2.2e-29
Identities = 22/123 (17%), Positives = 52/123 (42%)
Query: 816 DPLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
+ L P L + Y E+ + + S + EL L R + + ++E +
Sbjct: 938 ESLQLKTPELLYFKQYMEKTEWIDSFNQISQKTDSTMEELVELIERGEKIGLTS-DNENM 996
Query: 876 SQRI---SSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQ 932
+ + ++ W V +S + + L++L+SEA + I+ + L +++ +
Sbjct: 997 ATALLLKEKSENWMKQVEGLLSQE---TLSTSKLFQLKSEANSICINRGLLEQLNEVLQK 1053
Query: 933 AES 935
+E+
Sbjct: 1054 SEN 1056
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 341 (125.1 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 63/153 (41%), Positives = 88/153 (57%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L ++ + + I GV P+LY GM ++F WH ED YS+NY H+G PK
Sbjct: 149 WNVGHLGTIQDLLEQECGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGQPKT 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY+VP E + + P L V +++P+VL ENG+P + QE G F
Sbjct: 209 WYAVPPEHGRRLELLAKELFPGSSQGCQAFLRHKVALISPTVLKENGIPFGRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAEA+NFA W+ +G
Sbjct: 269 MVTFPYGYHAGFNHGFNCAEAINFATPRWIDYG 301
Score = 95 (38.5 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 32 VYYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAIH 89
++ PT++EF D +YI + ++ A R G+ K++PPK W+ + D + + T Q +
Sbjct: 17 IFRPTKEEFNDFDKYIAYMESQGAHRAGLAKVIPPKEWRARQSYDNISNILIATPLQQVV 76
Query: 90 QLQA 93
QA
Sbjct: 77 SGQA 80
Score = 39 (18.8 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 732 CSLKVLQGLFSSDAYGTLLREAEQFLWAGFEMDAVRD 768
CS + FS DA+ +L+ +W + AV D
Sbjct: 307 CSCGEARVSFSMDAFVRILQPERYEMWKRGQDQAVVD 343
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 346 (126.9 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 64/166 (38%), Positives = 97/166 (58%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ +++++ ++ WN+ L + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYDKHVDA-WNIGRLNTILDVVENESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYS+P E++ + P + L +T+++PS+L + G
Sbjct: 195 YSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP SYHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG 300
Score = 106 (42.4 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT ++F+D YI + A+ A R G+ KIVPPK WKP D + P Q +
Sbjct: 17 FRPTMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWKPRKCYDDIDELVIPAPIQQV 74
Score = 57 (25.1 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FRR+A+ K R +E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRRIANSDKYCTPRYTDFE--DLERKYWK---NLTFNAPI-YGADVNGTLY 141
Score = 44 (20.5 bits), Expect = 5.2e-32, Sum P(6) = 5.2e-32
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1457 ESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
E D + + C C+ C H C + D+ E ++C C
Sbjct: 724 EEDGTSV-LITCRNCQVCVHASCYGVSP-DKA-TEDWMCSRC 762
Score = 41 (19.5 bits), Expect = 5.2e-32, Sum P(6) = 5.2e-32
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW E ++ C +D+++ S D+FV
Sbjct: 292 ATLRWIEYGKQSVLCS---CR-KDMVKISMDVFV 321
Score = 40 (19.1 bits), Expect = 2.3e-32, Sum P(4) = 2.3e-32
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 1012 KEGASLRIQVDDLPLVEVELKK 1033
++G+ L ++ DD+ +E EL K
Sbjct: 988 EDGSQLMVKRDDVYTLEEELPK 1009
Score = 37 (18.1 bits), Expect = 4.7e-32, Sum P(4) = 4.7e-32
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 1019 IQVDDLPLVEVELKKAHC--REKALKAC 1044
+ V +PL LK C R K + C
Sbjct: 812 VDVSKIPLQRFRLKCIFCKKRRKRIAGC 839
Score = 37 (18.1 bits), Expect = 5.2e-32, Sum P(6) = 5.2e-32
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1729 DEWYHIDC-VKLLSAPEIYI 1747
D+W H+ C V +L A + I
Sbjct: 787 DKWVHVMCAVGVLEAKFVNI 806
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 337 (123.7 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
++ ++++E + WN+ L + + +I GV P+LY GM + F WH ED
Sbjct: 138 INGSIYDEGVDE-WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WY++P E++ + P L +T+++PSVL + G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 89 (36.4 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQ 86
+ P+ +EF++ +Y+ + ++ A R G+ K++PPK WKP D + + P Q
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQ 74
Score = 65 (27.9 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGS 366
K TV+ FR++A+ +K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 92 KAMTVKEFRQLANSSKYCTPRY--LDYEDLERKYWKNLTFVAP----IYGADINGSIYDE 145
Query: 367 G 367
G
Sbjct: 146 G 146
Score = 49 (22.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 1018 RIQVDDLPLVEVELKKAHCREKALK 1042
+I VD +PL ++LK CR + K
Sbjct: 793 QIDVDRIPLQRLKLKCIFCRHRVKK 817
Score = 41 (19.5 bits), Expect = 2.3e-29, Sum P(6) = 2.3e-29
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 1012 KEGASLRIQVDDLPLVEVELKKAHCREKALKA 1043
KE RIQVD L + +L C ++ A
Sbjct: 430 KEALDTRIQVDQSLLNDTKLSGKGCISSSVTA 461
Score = 40 (19.1 bits), Expect = 3.0e-29, Sum P(6) = 3.0e-29
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C D+++ S DIFV
Sbjct: 294 ATVRWIDYGK---VAKLCTCR-NDMVKISMDIFV 323
Score = 38 (18.4 bits), Expect = 2.3e-29, Sum P(6) = 2.3e-29
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + + E+ +SW K
Sbjct: 595 LPEVLSIDEEVEETESWAK 613
Score = 37 (18.1 bits), Expect = 2.3e-29, Sum P(6) = 2.3e-29
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1706 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1736
R L CI CR +K AC QC +H+ C
Sbjct: 803 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 838
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 337 (123.7 bits), Expect = 4.0e-31, Sum P(5) = 4.0e-31
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYEQHVDE-WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 195 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 111 (44.1 bits), Expect = 4.0e-31, Sum P(5) = 4.0e-31
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 4.0e-31, Sum P(5) = 4.0e-31
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 40 (19.1 bits), Expect = 4.0e-31, Sum P(5) = 4.0e-31
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 4.0e-31, Sum P(5) = 4.0e-31
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 292 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 321
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 344 (126.2 bits), Expect = 4.2e-31, Sum P(4) = 4.2e-31
Identities = 65/157 (41%), Positives = 90/157 (57%)
Query: 392 WNLNNLPKLKGSILRMVHHN----ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWG 447
WN+ NL ++L MV H I GV P+LY GM + F WH ED YS+NY H+G
Sbjct: 149 WNIGNL----NTLLDMVEHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 204
Query: 448 DPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQE 507
+PK WY++P E++ + P L +T+++PS+L + G+P + QE
Sbjct: 205 EPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQE 264
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 265 AGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 97 (39.2 bits), Expect = 4.2e-31, Sum P(4) = 4.2e-31
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT +EF++ +Y+ I ++ A R G+ K++PPK WKP D + P Q +
Sbjct: 18 FRPTLEEFREFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTYDDIDDMIIPAPIQQV 75
Score = 54 (24.1 bits), Expect = 4.2e-31, Sum P(4) = 4.2e-31
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KPMTVGEYRRLANSEKYCTPRHQDFE--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 44 (20.5 bits), Expect = 4.2e-31, Sum P(4) = 4.2e-31
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 1027 VEVELKKAHCREKALKACDTKMPLDFIRQVTA-EAVILQIEREKLFIDLSGVLAA-AMRW 1084
+++E+KK+ R L T+ PL ++Q T+ + E+ D + + +++W
Sbjct: 608 MKMEIKKS--RRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDPEALKSLLSLQW 665
Query: 1085 EERA 1088
+ RA
Sbjct: 666 KNRA 669
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 337 (123.7 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
++ ++++E + WN+ L + + +I GV P+LY GM + F WH ED
Sbjct: 138 INGSIYDEGVDE-WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WY++P E++ + P L +T+++PSVL + G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 89 (36.4 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQ 86
+ P+ +EF++ +Y+ + ++ A R G+ K++PPK WKP D + + P Q
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQ 74
Score = 64 (27.6 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGS 366
K TV+ FR++A+ +K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 92 KPMTVKEFRQLANSSKYCTPRY--LDYEDLERKYWKNLTFVAP----IYGADINGSIYDE 145
Query: 367 G 367
G
Sbjct: 146 G 146
Score = 48 (22.0 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 1018 RIQVDDLPLVEVELKKAHCREK 1039
+I VD +PL ++LK CR++
Sbjct: 792 QIDVDRIPLQRLKLKCIFCRQR 813
Score = 42 (19.8 bits), Expect = 4.8e-30, Sum P(5) = 4.8e-30
Identities = 28/82 (34%), Positives = 38/82 (46%)
Query: 1118 LDEVQNEISTAKSWLKNSELFLASAFAVAPASCS-LLRLES--LKDLVSQSKFLKISLKE 1174
+DE+Q E TA + S L AS + P S + ES LK L +S + SL E
Sbjct: 459 IDEIQPENDTANAVTSPSTLKKASD--LIPFSHGHITGKESRLLKILQLESPKIPSSLAE 516
Query: 1175 QTE-LEKVINNCERWQNHASSL 1195
L + N E + HAS+L
Sbjct: 517 SNRVLTEGEENDE--EGHASNL 536
Score = 40 (19.1 bits), Expect = 3.0e-30, Sum P(4) = 3.0e-30
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 628 CIICRQYLYLSAVAC------RCRPAAF 649
CI CRQ + + AC RC PA+F
Sbjct: 807 CIFCRQRVKRVSGACIQCSYGRC-PASF 833
Score = 40 (19.1 bits), Expect = 4.8e-30, Sum P(5) = 4.8e-30
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C D+++ S DIFV
Sbjct: 294 ATVRWIDYGK---VAKLCTCR-NDMVKISMDIFV 323
Score = 38 (18.4 bits), Expect = 1.2e-29, Sum P(5) = 1.2e-29
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + + E+ +SW K
Sbjct: 594 LPEVLSIDEEVEETESWAK 612
Score = 37 (18.1 bits), Expect = 9.6e-30, Sum P(5) = 9.6e-30
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1012 KEGASLRIQVDDLPLVEVELKKAHC 1036
KE + RIQVD + +L C
Sbjct: 429 KEASDTRIQVDQSLTNDTKLSGKSC 453
Score = 37 (18.1 bits), Expect = 1.5e-29, Sum P(5) = 1.5e-29
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 1778 TPSPKH-TNSRKKLRKAEPGL 1797
TP K RKKLRKA L
Sbjct: 353 TPEVKTWLQRRKKLRKAPKSL 373
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 337 (123.7 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
++ ++++E + WN+ L + + +I GV P+LY GM + F WH ED
Sbjct: 138 INGSIYDEGVDE-WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WY++P E++ + P L +T+++PSVL + G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 89 (36.4 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQ 86
+ P+ +EF++ +Y+ + ++ A R G+ K++PPK WKP D + + P Q
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQ 74
Score = 64 (27.6 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGS 366
K TV+ FR++A+ K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 92 KAMTVKEFRQLANSGKYCTPRY--LDYEDLERKYWKNLTFVAP----IYGADINGSIYDE 145
Query: 367 G 367
G
Sbjct: 146 G 146
Score = 46 (21.3 bits), Expect = 7.4e-31, Sum P(4) = 7.4e-31
Identities = 13/52 (25%), Positives = 19/52 (36%)
Query: 1748 CAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQ 1799
CA P + G T+ E PK P PK S + ++ L +
Sbjct: 477 CATVPPSNPRADYASMSSGHVTSEESDPPKLPWPKSPESYSSVAESTSALTE 528
Score = 43 (20.2 bits), Expect = 1.5e-30, Sum P(4) = 1.5e-30
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1728 CDEWYHIDCVKLLSA--PEIYICAACK 1752
C + H C+ ++ +IY+CA CK
Sbjct: 723 CCQRLHEKCMCFVNEFICKIYVCAPCK 749
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 335 (123.0 bits), Expect = 8.2e-31, Sum P(5) = 8.2e-31
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYEKHVDE-WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 195 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 111 (44.1 bits), Expect = 8.2e-31, Sum P(5) = 8.2e-31
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 8.2e-31, Sum P(5) = 8.2e-31
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 40 (19.1 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 8.2e-31, Sum P(5) = 8.2e-31
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 292 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 321
Score = 39 (18.8 bits), Expect = 8.2e-31, Sum P(5) = 8.2e-31
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 1154 RLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDA 1199
RL D+ F + +K++ + ++VIN+ R +++ S L A
Sbjct: 1017 RLSVASDMRFNEIFTEKEVKQEKKRQRVINSRYR-EDYIESALYRA 1061
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1495 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1523
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 342 (125.4 bits), Expect = 8.2e-31, Sum P(4) = 8.2e-31
Identities = 63/153 (41%), Positives = 86/153 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ L + + R I GV P+LY GM S F WH ED YS+NY H+G+PK
Sbjct: 151 WNIGRLNTILDMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPKS 210
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY VP E++ + P + L +T+++PS+L + G+P V QE G F
Sbjct: 211 WYVVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPSILRKYGIPFEKVTQEAGQF 270
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 271 IVTFPYGYHAGFNHGFNCAESTNFATQRWIDYG 303
Score = 115 (45.5 bits), Expect = 8.2e-31, Sum P(4) = 8.2e-31
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
++PT++EFKD YI + ++ A R G+ K+VPPK WKP D + PT Q +
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKVVPPKDWKPRRTYDDIEDLVIPTPIQQV 77
Score = 57 (25.1 bits), Expect = 8.2e-31, Sum P(4) = 8.2e-31
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR+ A+ K R A ++E+KFW+ N +YG+D+ ++Y
Sbjct: 93 KPMTVREFRKTANTDKFSNPRY--ADFEELERKFWK---NLTFNPP-LYGADVSGTLY 144
Score = 39 (18.8 bits), Expect = 5.3e-30, Sum P(5) = 5.3e-30
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 1752 KPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKA 1793
K +AE + ++ + T+ + + SPK +K+LR +
Sbjct: 416 KAEAEVEKSVRDEEPSSTSEQI---SSSSPKQNTGQKRLRSS 454
Score = 38 (18.4 bits), Expect = 5.3e-30, Sum P(5) = 5.3e-30
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 1096 AQMCEF-EDIIRASQDIFV 1113
A +C +D+++ S D+FV
Sbjct: 306 ATLCSCRKDMVKISMDVFV 324
Score = 37 (18.1 bits), Expect = 8.2e-31, Sum P(4) = 8.2e-31
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 1105 IRASQDIFVVLPSLDEVQNEIS 1126
+ + Q+ ++ +D+VQ+E S
Sbjct: 1053 VSSEQETSIISAQVDDVQSEYS 1074
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 335 (123.0 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYEKHVDE-WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 195 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 111 (44.1 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 40 (19.1 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 791 DRWVHVSCAVAILEA 805
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1495 CPYCQYFESESVSQFGGSPLRFGGKRSDL 1523
C C F++ +FGG G SDL
Sbjct: 668 CAVCMIFQTYHQVEFGGFNQNCGNA-SDL 695
Score = 39 (18.8 bits), Expect = 1.3e-30, Sum P(6) = 1.3e-30
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 292 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 321
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 332 (121.9 bits), Expect = 1.9e-30, Sum P(4) = 1.9e-30
Identities = 61/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ NL + + R I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 149 WNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P L +T+++P +L + G+P + QE G F
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 107 (42.7 bits), Expect = 1.9e-30, Sum P(4) = 1.9e-30
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT DEF+D Y+ I ++ A R G+ KI+PPK WKP D + P Q +
Sbjct: 18 FRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQV 75
Score = 55 (24.4 bits), Expect = 1.9e-30, Sum P(4) = 1.9e-30
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KAMTVGEYRRLANSEKYCTPRHQDFD--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 39 (18.8 bits), Expect = 1.9e-30, Sum P(4) = 1.9e-30
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 557 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERMWR 597
A + L V+ ++ +D P + +L +Y ++RM R
Sbjct: 809 AIAVPEVRFLNVIERNPVDVSAIPEQRWKLKCIYCRKRMKR 849
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 335 (123.0 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYEKHVDE-WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 195 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 111 (44.1 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 40 (19.1 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 39 (18.8 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 292 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 321
Score = 37 (18.1 bits), Expect = 2.1e-30, Sum P(6) = 2.1e-30
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1495 CPYCQYFESESVSQFGG 1511
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 337 (123.7 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
++ ++++E + WN+ L + + +I GV P+LY GM + F WH ED
Sbjct: 138 INGSIYDEGVDE-WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WY++P E++ + P L +T+++PSVL + G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 89 (36.4 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQ 86
+ P+ +EF++ +Y+ + ++ A R G+ K++PPK WKP D + + P Q
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQCYDDIDNLLIPAPIQ 74
Score = 64 (27.6 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGS 366
K TV+ FR++A+ K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 92 KAMTVKEFRQLANSGKYCTPRY--LDYEDLERKYWKNLTFVAP----IYGADINGSIYDE 145
Query: 367 G 367
G
Sbjct: 146 G 146
Score = 41 (19.5 bits), Expect = 6.1e-30, Sum P(5) = 6.1e-30
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C +D+++ S DIFV
Sbjct: 294 ATVRWIDYGK---VAKLCTCR-KDMVKISMDIFV 323
Score = 40 (19.1 bits), Expect = 6.1e-30, Sum P(5) = 6.1e-30
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + ++ E+ +SW K
Sbjct: 597 LPEVLSIEEEVEETESWAK 615
Score = 39 (18.8 bits), Expect = 3.8e-30, Sum P(4) = 3.8e-30
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1018 RIQVDDLPLVEVELKKAHCREK 1039
+I V +PL ++LK CR +
Sbjct: 795 QIDVGRIPLQRLKLKCIFCRHR 816
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 332 (121.9 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 61/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ NL + + R I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 149 WNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P L +T+++P +L + G+P + QE G F
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 107 (42.7 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT +EFKD +Y+ I ++ A R G+ KI+PPK WKP D + P Q +
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQV 75
Score = 55 (24.4 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KAMTVGEYRRLANSEKYCTPRHQDFD--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 41 (19.5 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1706 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1736
R L C+ CRK +K AC QC E +H+ C
Sbjct: 867 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 902
Score = 41 (19.5 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1722 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1755
+IAC +C H C + PE+ + C+ C A
Sbjct: 777 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 812
Score = 39 (18.8 bits), Expect = 5.1e-30, Sum P(5) = 5.1e-30
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 1102 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 1161
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 1162 VSQSKFLK--ISLKEQTELEK 1180
++K L+ ISLKE +K
Sbjct: 364 SLKAKLLRRQISLKENRHWKK 384
Score = 39 (18.8 bits), Expect = 8.2e-30, Sum P(5) = 8.2e-30
Identities = 21/85 (24%), Positives = 30/85 (35%)
Query: 1697 EKELKSLRARSMLYCICRK-PYDEKAMIACYQCDEWYHIDCVKLLSAPEIYICAACKPQA 1755
E E K MLY + R P K ++C Q E + A P
Sbjct: 550 EPEAKPRPVIPMLYVVPRPGPTGNKGRVSCQQASEHF----------------AQKGPTW 593
Query: 1756 EESSTPQNVDGGRTNAEFLEPKTPS 1780
+E +TP + G + E + PS
Sbjct: 594 KEQATPMELTGPEEESGASEGQNPS 618
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 327 (120.2 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + + R I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P L +T+++P +L + G+P + QE G F
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 107 (42.7 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT +EFKD +Y+ I ++ A R G+ KI+PPK WKP D + P Q +
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQV 75
Score = 55 (24.4 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KAMTVGEYRRLANSEKYCTPRHQDFD--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 40 (19.1 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1496 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1527
PYCQ ++E ++ G G P K R R LI
Sbjct: 692 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 728
Score = 37 (18.1 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 557 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 595
A + L V+ + +D P + +L VY ++RM
Sbjct: 821 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 859
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 327 (120.2 bits), Expect = 6.7e-30, Sum P(4) = 6.7e-30
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + + R I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P L +T+++P +L + G+P + QE G F
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 107 (42.7 bits), Expect = 6.7e-30, Sum P(4) = 6.7e-30
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT +EFKD +Y+ I ++ A R G+ KI+PPK WKP D + P Q +
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQV 75
Score = 55 (24.4 bits), Expect = 6.7e-30, Sum P(4) = 6.7e-30
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KAMTVGEYRRLANSEKYCTPRHQDFD--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 40 (19.1 bits), Expect = 6.7e-30, Sum P(4) = 6.7e-30
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1496 PYCQYFESES---VSQFG-GSPLRFGGK-RSDLRMLI 1527
PYCQ ++E ++ G G P K R R LI
Sbjct: 726 PYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLI 762
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(4) = 1.4e-29
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 557 AAVLSHEELLCVVAKSDLDSKVSPYLKRELLRVYTKERM 595
A + L V+ + +D P + +L VY ++RM
Sbjct: 855 AIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRM 893
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 336 (123.3 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 136 VNGTLYEKHVDE-WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 194
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 195 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 254
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 255 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 300
Score = 108 (43.1 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ Y+ I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 40 (19.1 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 793 DRWVHVSCAVAILEA 807
Score = 39 (18.8 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 292 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 321
Score = 37 (18.1 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1495 CPYCQYFESESVSQFGG 1511
C C F++ +FGG
Sbjct: 670 CAVCMIFQTYHQVEFGG 686
Score = 37 (18.1 bits), Expect = 6.7e-30, Sum P(7) = 6.7e-30
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1258 KKALSFLSVSPSLEDVESLMAVAEGLSTR 1286
KK+ S L S S + + S +E LS R
Sbjct: 508 KKSSSSLGSSSSRDSISSDSETSEPLSCR 536
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 337 (123.7 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 62/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
++ ++++E + WN+ L + + +I GV P+LY GM + F WH ED
Sbjct: 138 INGSIYDEDVDE-WNIARLNTVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDL 196
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WY++P E++ + P L +T+++PSVL + G
Sbjct: 197 YSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYG 256
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 257 IPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 302
Score = 85 (35.0 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQ 86
+ P+ +EF++ +Y+ + ++ A R G+ K++PP+ WKP D + + P Q
Sbjct: 19 FRPSMEEFREFNKYLAFMESKGAHRAGLAKVIPPREWKPRQCYDDIDNLLIPAPIQ 74
Score = 59 (25.8 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV+ FR++A+ K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 92 KAMTVKEFRQLANSGKYCTPRY--LDYEDLERKYWKNLTFVAP----IYGADINGSIY 143
Score = 43 (20.2 bits), Expect = 7.4e-29, Sum P(6) = 7.4e-29
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + ++ E+ +SW K
Sbjct: 594 LPEVPSIEEEVEETESWAK 612
Score = 42 (19.8 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1018 RIQVDDLPLVEVELKKAHCREKALK 1042
+I V +PL ++LK CR + K
Sbjct: 792 QIDVGRIPLQRLKLKCIFCRHRVKK 816
Score = 41 (19.5 bits), Expect = 7.4e-29, Sum P(6) = 7.4e-29
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C +D+++ S DIFV
Sbjct: 294 ATVRWIDYGK---VAKLCTCR-KDMVKISMDIFV 323
Score = 38 (18.4 bits), Expect = 3.5e-28, Sum P(7) = 3.5e-28
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 1121 VQNEISTAKSW 1131
++ E TAKSW
Sbjct: 558 IEGETKTAKSW 568
Score = 38 (18.4 bits), Expect = 3.5e-28, Sum P(7) = 3.5e-28
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 1388 DCPELEKVLSKVDKVENW 1405
+ PE+ + +V++ E+W
Sbjct: 593 ELPEVPSIEEEVEETESW 610
Score = 37 (18.1 bits), Expect = 7.4e-29, Sum P(6) = 7.4e-29
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1706 RSMLYCI-CRKPYDEKAMIACYQCDEW-----YHIDC 1736
R L CI CR +K AC QC +H+ C
Sbjct: 802 RLKLKCIFCRHRV-KKVSGACIQCSYGRCPASFHVTC 837
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 327 (120.2 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + + R I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P L +T+++P +L + G+P + QE G F
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEF 268
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 269 MITFPYGYHAGFNHGFNCAESTNFATLRWIDYG 301
Score = 107 (42.7 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+ PT +EFKD +Y+ I ++ A R G+ KI+PPK WKP D + P Q +
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQV 75
Score = 55 (24.4 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +RR+A+ K R +E+K+W+ + V +YG+D+ S+Y
Sbjct: 91 KAMTVGEYRRLANSEKYCTPRHQDFD--DLERKYWKNLTF----VSPIYGADISGSLY 142
Score = 41 (19.5 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 1706 RSMLYCI-CRKPYDEKAMIACYQCD-EW----YHIDC 1736
R L C+ CRK +K AC QC E +H+ C
Sbjct: 884 RWKLKCVYCRKRM-KKVSGACIQCSCEHCSTSFHVTC 919
Score = 41 (19.5 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1722 MIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQA 1755
+IAC +C H C + PE+ + C+ C A
Sbjct: 794 LIACAKCCLQVHASCYGI--RPELVNEGWTCSRCTAHA 829
Score = 38 (18.4 bits), Expect = 2.5e-29, Sum P(5) = 2.5e-29
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 1102 EDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCSLLRLESLKDL 1161
+D+++ S D+FV + L + E+ W + +L + S L S
Sbjct: 311 KDMVKISMDVFVRI--LQPERYEL-----WKQGKDLTVLDHTRPTALSSPELSTWSASRA 363
Query: 1162 VSQSKFLK--ISLKEQTELEK 1180
++K L+ ISLKE K
Sbjct: 364 SLKAKLLRRQISLKENRHWRK 384
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 334 (122.6 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 60/153 (39%), Positives = 87/153 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + ++ I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 145 WNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 204
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY+VP E++ + P L +T+++PS+L + G+P + QE G F
Sbjct: 205 WYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMTLISPSILKKYGIPFEKITQEAGEF 264
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 265 MVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 104 (41.7 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
++PT +EFK+ YI + ++ A + G+ KIVPPK+WKP + D + P Q +
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKPRGSYDDIDDLIIPAPIQQV 71
Score = 40 (19.1 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1749 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1781
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 1095 KAQMCEF-EDIIRASQDIFV 1113
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 334 (122.6 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 60/153 (39%), Positives = 87/153 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + ++ I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 145 WNVGHLNTILDTVEHESGITIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 204
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY+VP E++ + P L +T+++PS+L + G+P + QE G F
Sbjct: 205 WYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMTLISPSILKKYGIPFEKITQEAGEF 264
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
++TFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 265 MVTFPYGYHAGFNHGFNCAESTNFATRRWIDYG 297
Score = 104 (41.7 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
++PT +EFK+ YI + ++ A + G+ KIVPPK+WKP + D + P Q +
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKIVPPKNWKPRGSYDDIDDLIIPAPIQQV 71
Score = 40 (19.1 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1749 AACKPQAEESSTPQNVDGGRTNAEF-LEPKTPSP 1781
A CKPQ P+ D + + P TP+P
Sbjct: 534 ALCKPQTPSPEKPRE-DLHIPDISLDVRPNTPTP 566
Score = 37 (18.1 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 1095 KAQMCEF-EDIIRASQDIFV 1113
+A +C +D+++ S D+FV
Sbjct: 299 QAILCSCRKDMVKISMDVFV 318
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 329 (120.9 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 62/159 (38%), Positives = 87/159 (54%)
Query: 390 SPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDP 449
S WN+ +L L + + I GV P+LY GM + F WH ED YS+NY H+G P
Sbjct: 227 SEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGKP 286
Query: 450 KCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPG 509
K WY++P E++ + P L +T+++PS+L + +P + QE G
Sbjct: 287 KSWYAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEG 346
Query: 510 NFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGA 548
F+ITFP YHAGFN G NCAE+ NFA W+ +G A
Sbjct: 347 EFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMAA 385
Score = 91 (37.1 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKP 70
+ PT +EFKD +YI + + A G+ K++PPK WKP
Sbjct: 98 FRPTMEEFKDFGKYIAYMETQGAHVAGLAKVIPPKEWKP 136
Score = 52 (23.4 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQ-MEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV +R++A+ K++ + +E+K+W+ + V +YG+D+ S+Y
Sbjct: 171 KSMTVGEYRKLAN---SKKYNTPQHKDFDDLERKYWKNLTF----VSPIYGADISGSLY 222
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 335 (123.0 bits), Expect = 1.0e-28, Sum P(5) = 1.0e-28
Identities = 62/153 (40%), Positives = 89/153 (58%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + I +I GV P+LY GM ++F WH ED YS+NY H+G+PK
Sbjct: 150 WNIGHLNSVLDVIEEDCGVSIQGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPKS 209
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ P+ F + L +T+++PSVL + +P + QE G F
Sbjct: 210 WYAIPPEHGKRLERLAIGFFPNSFKSCEAFLRHKMTLISPSVLKKYSIPFDKITQEAGEF 269
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 270 MITFPYGYHAGFNHGFNCAESTNFASIRWIDYG 302
Score = 99 (39.9 bits), Expect = 1.0e-28, Sum P(5) = 1.0e-28
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKP 70
+ PT +EFKD +Y+ + ++ A R G+ K++PPK WKP
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKP 57
Score = 50 (22.7 bits), Expect = 1.0e-28, Sum P(5) = 1.0e-28
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 307 KRYTVESFRRVA--DRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV+ FRR+A D R+ + +E+K+W+ + V +YG+D+ ++Y
Sbjct: 92 KPLTVQEFRRLANSDMYCTPRYLNYE----DLERKYWKNLTF----VSPIYGADVSGTLY 143
Score = 47 (21.6 bits), Expect = 1.0e-28, Sum P(5) = 1.0e-28
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 881 SAKVWRDSVRKCISNKCPAAIEIDVLYKLES-EALDLKIDVPETD 924
+AK WR +RK + P+A++ E E + D PET+
Sbjct: 1002 TAKSWRHPLRKPTARAVPSAVKQQAASDDEVIEECASEEDEPETE 1046
Score = 43 (20.2 bits), Expect = 2.6e-28, Sum P(5) = 2.6e-28
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 1117 SLDEVQNEISTA---KSWLKNSELFLASAFAVAPASCS--LLRLES--LKDLVSQSKFLK 1169
SLD ST +SWL+ S AP SCS L ++S +K +S+
Sbjct: 342 SLDHTLPTPSTTPELQSWLQRRRRKTPSTSLHAPRSCSKRLKTVDSAPVKGSGRRSRSAA 401
Query: 1170 ISLKEQTELEK 1180
++ K + E E+
Sbjct: 402 LTAKNKEEEEE 412
Score = 39 (18.8 bits), Expect = 1.0e-28, Sum P(5) = 1.0e-28
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 1709 LYCICRKPYDEKAMI--ACYQCDEWYHIDCVKLLSAP 1743
+YC R A I +C +C +H+ C P
Sbjct: 1241 IYCRNRIKRLSGACIQCSCGRCPTSFHVTCAHAAGVP 1277
Score = 37 (18.1 bits), Expect = 1.6e-28, Sum P(5) = 1.6e-28
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 1453 CMCCESDSKELEFLI----CSACKDCYHLQC 1479
C+ C + K L C C +H+ C
Sbjct: 1240 CIYCRNRIKRLSGACIQCSCGRCPTSFHVTC 1270
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 877 QRISSAKVWRDSVRKCISNKCP 898
++ S V D VR C CP
Sbjct: 678 EKSHSPPVITDEVRGCSERVCP 699
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 320 (117.7 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 62/153 (40%), Positives = 84/153 (54%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+N L + + + + I GV +LY GM + F WH ED YS+NY H+G PK
Sbjct: 146 WNINRLGTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKT 205
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY VP EKV P + L +T+++P +L ++ VPV + QE G
Sbjct: 206 WYVVPPECGRKLEKVANQYFPASYKNCNAYLRHKMTLISPQILKQHDVPVSKITQEAGEI 265
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 266 MITFPFGYHAGFNHGFNCAESTNFAMERWIEYG 298
Score = 88 (36.0 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 32 VYYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKP 70
V+ PT +EFKD +Y+ + ++ A + G+ K+VPP W P
Sbjct: 11 VFRPTWEEFKDFPKYVAYMESQGAHKAGLAKVVPPPEWVP 50
Score = 37 (18.1 bits), Expect = 5.2e-28, Sum P(3) = 5.2e-28
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 943 ALRGSMSLKTVELLLQELGDFTVNMPELELLKQ 975
+L+ +LKT + LL+ + D T + E E K+
Sbjct: 430 SLQSPANLKTKQELLEYIDDGTEDDDEEEDFKR 462
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 324 (119.1 bits), Expect = 4.2e-27, Sum P(4) = 4.2e-27
Identities = 62/153 (40%), Positives = 89/153 (58%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ LP +IL + + GV +LY G+ ++F WH ED YS+NY H+G PK
Sbjct: 199 WNVAKLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQ 254
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WYS+P + F K M+ P+ P+ L + + +P +L ENG+ ++ G F
Sbjct: 255 WYSIPQEDRFKFYKFMQEQFPEEAKNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEF 314
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+IT+P YHAGFN+G N AE+VNFA +WLP G
Sbjct: 315 MITYPYGYHAGFNYGYNLAESVNFALEEWLPIG 347
Score = 91 (37.1 bits), Expect = 4.2e-27, Sum P(4) = 4.2e-27
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 31 PVYYPTEDEFKDPLEYICK-IRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIH 89
PV+ PT ++F+D Y CK I + G+ K++PPK WK LDL P + +
Sbjct: 15 PVFKPTYEQFEDFYAY-CKAINKYGMKSGVVKVIPPKEWKDK--LDL-----PYSAETLQ 66
Query: 90 QLQARS 95
+++ +S
Sbjct: 67 KIKIKS 72
Score = 40 (19.1 bits), Expect = 6.6e-22, Sum P(4) = 6.6e-22
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 116 GTKLNKKVFFEGEEL-DLCKLFNAAKRFGGYDKVVKEKKW 154
G + K + + E+ CK N G KV+ K+W
Sbjct: 13 GVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEW 52
Score = 38 (18.4 bits), Expect = 4.2e-27, Sum P(4) = 4.2e-27
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 336 MEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGF--------PRVCDHRPESV 379
+E+ +W+ + MYG+D SI+ G P + DH V
Sbjct: 168 LEEYYWKTLNFTTP----MYGADTPGSIFPEGLNVWNVAKLPNILDHMETKV 215
Score = 38 (18.4 bits), Expect = 4.2e-27, Sum P(4) = 4.2e-27
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1754 QAEESSTPQNVDGGRTN-----AEFLEPKTPSPK---HTNSRKKLRKAEP 1795
Q STP V T+ ++ + KTP P+ H + + L+K P
Sbjct: 604 QQHSFSTPSTVSNLSTSVLGPLSDTNDIKTPHPERPNHKTANRILKKESP 653
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 315 (115.9 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 63/154 (40%), Positives = 87/154 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ LP L L ++ + GV +LYLGM + F WH ED YS+NY H+G PK
Sbjct: 353 WNVAKLPNL----LDVIGQKVPGVNTAYLYLGMWKATFAWHLEDVDLYSINYIHFGAPKQ 408
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVEN-GVPVYSVLQEPGN 510
WYS+ +A FE+ M+S P L +++PS+L G+ V ++ G
Sbjct: 409 WYSISQEDAPRFEQAMKSIWPSDAKTCDQFLRHKTYLVSPSLLKSQYGITVNKMVHYEGE 468
Query: 511 FVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
FVIT+P YH+G+N G NCAE+VNFA WL +G
Sbjct: 469 FVITYPYGYHSGYNLGYNCAESVNFATEKWLDYG 502
Score = 70 (29.7 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWK---PP 71
PV+ P F+D +I +I R G+ K++PPK W+ PP
Sbjct: 81 PVFKP----FRDFQSFIKRIDKYGMRSGVVKVIPPKEWRDALPP 120
Score = 58 (25.5 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 989 DILVNINGRKDQHN---VIDELNCILKEGASLRI--QVDDLPLVEVELKKAHCRE 1038
D+L +G+ H + E IL++G+ + +D +P + LK +CRE
Sbjct: 604 DLLPTEDGKSHAHRRCALYTEETSILRDGSGKEVVCDIDKIPKARMGLKCLYCRE 658
Score = 46 (21.3 bits), Expect = 3.2e-24, Sum P(3) = 3.2e-24
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 1763 NVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGL--AQKMLA 1803
++DG ++ L P P+ T++R + RK + + A++M A
Sbjct: 541 DLDGYEAASDLLTPPRSVPEKTSNRGRKRKHDGDMNKAKRMRA 583
Score = 41 (19.5 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 1466 LICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFG 1510
L C C + + L PTE ++HA C Y E S+ + G
Sbjct: 591 LPCLLCPNDLDYEDLLPTEDGKSHAHRR-CAL--YTEETSILRDG 632
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 306 (112.8 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 77/248 (31%), Positives = 119/248 (47%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKK---FWEI-----VEGAAGNVEVMYGSD 358
K+Y++ ++ +A K R + S + K F+ I + +E Y
Sbjct: 103 KKYSIFQWKEMAKTRKPPRRKQRGKSETETHSKDIPFYNINTSEYTDDRCKELETNYWRS 162
Query: 359 LDTS--IYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVM 416
L S +YG+ D D ++ + WN+ +LP L L ++ + GV
Sbjct: 163 LSYSEPMYGA------DTMGSVFDKSI------TAWNVAHLPNL----LDLMEEKLPGVN 206
Query: 417 VPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFD 476
+LY G+ ++F WH ED YS+NY H+G PK WYS+P S+ F +M D F
Sbjct: 207 QAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFK 266
Query: 477 AQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 536
+ L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+VNFA
Sbjct: 267 QCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFA 326
Query: 537 PADWLPHG 544
DW G
Sbjct: 327 LDDWFEFG 334
Score = 74 (31.1 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ PT EF+D + I + GI K++PP W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
Score = 38 (18.4 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1021 VDDLPLVEVELKKAHCREKALKAC 1044
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 306 (112.8 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 77/248 (31%), Positives = 119/248 (47%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKK---FWEI-----VEGAAGNVEVMYGSD 358
K+Y++ ++ +A K R + S + K F+ I + +E Y
Sbjct: 103 KKYSIFQWKEMAKTRKPPRRKQRGKSETETHSKDIPFYNINTSEYTDDRCKELETNYWRS 162
Query: 359 LDTS--IYGSGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVM 416
L S +YG+ D D ++ + WN+ +LP L L ++ + GV
Sbjct: 163 LSYSEPMYGA------DTMGSVFDKSI------TAWNVAHLPNL----LDLMEEKLPGVN 206
Query: 417 VPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFD 476
+LY G+ ++F WH ED YS+NY H+G PK WYS+P S+ F +M D F
Sbjct: 207 QAYLYAGLWKASFAWHLEDQDLYSINYLHFGAPKQWYSIPQSQHEEFYALMVDLFHDEFK 266
Query: 477 AQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFA 536
+ L M++P+ L ++G+ V + G F+IT+P YHAGFN+ N AE+VNFA
Sbjct: 267 QCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEFIITYPYGYHAGFNYDYNLAESVNFA 326
Query: 537 PADWLPHG 544
DW G
Sbjct: 327 LDDWFEFG 334
Score = 74 (31.1 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ PT EF+D + I + GI K++PP W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKVIPPTQW 60
Score = 38 (18.4 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1021 VDDLPLVEVELKKAHCREKALKAC 1044
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 303 (111.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 58/153 (37%), Positives = 84/153 (54%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ L + + + I GV +LY GM S+F WH ED YS+NY H+G PK
Sbjct: 155 WNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKT 214
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P + EK+ + + + L +TM++P VL ++ +P + QE G
Sbjct: 215 WYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEAGEI 274
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G N AE+ NFA W+ +G
Sbjct: 275 MITFPFGYHAGFNHGFNGAESTNFASKRWIEYG 307
Score = 60 (26.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKP 70
+ P+ +EF++ YI I + A G+ KI PP W P
Sbjct: 21 FRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVP 59
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 330 (121.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 61/153 (39%), Positives = 87/153 (56%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +L + + +I GV P+LY GM + F WH ED YS+NY H+G+PK
Sbjct: 94 WNIAHLNTILDVVGEDCGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 153
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WY++P E++ + P L +T+++PS+L + G+P V QE G F
Sbjct: 154 WYAIPPEHGKRLERLAQGFFPSSSHGCNAFLRHKMTLISPSILKKYGIPFDKVTQEAGEF 213
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 214 MITFPYGYHAGFNHGFNCAESTNFATIRWIDYG 246
Score = 58 (25.5 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGS 366
K TV+ F+++A+ K R +E+K+W+ + A +YG+D++ SIY
Sbjct: 36 KPMTVKEFKQLANSDKYCTPRY--IDYEDLERKYWKNLTFVAP----IYGADINGSIYDK 89
Query: 367 G 367
G
Sbjct: 90 G 90
Score = 39 (18.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 1019 IQVDDLPLVEVELKKAHCREKALKACD 1045
++ D L+ + + AH K K C+
Sbjct: 791 VRPTDCLLITITITHAHTPNKRTKTCE 817
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 303 (111.7 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +LP L L ++ + GV +LY G+ + F WH ED YS+NY H+G PK
Sbjct: 186 WNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAPKQ 241
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WYS+P S+ F +M D F + L M++P+ L ++G+ V + G F
Sbjct: 242 WYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+IT+P YHAGFN+ N AE+VNFA DW G
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFG 334
Score = 73 (30.8 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ PT EF+D + I + GI K++PP W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
Score = 38 (18.4 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1021 VDDLPLVEVELKKAHCREKALKAC 1044
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 303 (111.7 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 60/153 (39%), Positives = 85/153 (55%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+ +LP L L ++ + GV +LY G+ + F WH ED YS+NY H+G PK
Sbjct: 186 WNVAHLPNL----LDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAPKQ 241
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WYS+P S+ F +M D F + L M++P+ L ++G+ V + G F
Sbjct: 242 WYSIPQSQHEEFYALMVDLFHDEFKQCSEFLRHKTFMVSPAYLEKHGIRVNHTIHREGEF 301
Query: 512 VITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+IT+P YHAGFN+ N AE+VNFA DW G
Sbjct: 302 IITYPYGYHAGFNYDYNLAESVNFALDDWFEFG 334
Score = 73 (30.8 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ PT EF+D + I + GI K++PP W
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKVIPPTQW 60
Score = 38 (18.4 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 1021 VDDLPLVEVELKKAHCREKALKAC 1044
+DD+ + +L+ CR+ + AC
Sbjct: 488 LDDITKNQKKLRCGVCRQSEMGAC 511
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 302 (111.4 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 59/156 (37%), Positives = 85/156 (54%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WN+N L G+IL ++ I GV +LY GM + F WH ED YS+N+ H+G PK
Sbjct: 229 WNMNRL----GTILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKY 284
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPD---LLFQLVTMLNPSVLVENGVPVYSVLQEP 508
W+++ A FE+ M + P L ++ P +L + G+P +++Q P
Sbjct: 285 WFAISSEHADRFERFMSQQFSYQNEYAPQCKAFLRHKTYLVTPELLRQAGIPYATMVQRP 344
Query: 509 GNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
F+ITFPR YH GFN G N AE+ NFA W+ +G
Sbjct: 345 NEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYG 380
Score = 81 (33.6 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 33 YYPTEDEFKDPLEYICKIRAEAE--RYGICKIVPPKSWKP 70
+YPT EFK+ +YI KI + GI KIV P+ W P
Sbjct: 90 FYPTMREFKNFSQYIKKIEQNGGHLKAGIAKIVAPEGWTP 129
Score = 49 (22.3 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 16/59 (27%), Positives = 31/59 (52%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWE-IVEGAAGNVEVMYGSDLDTSIY 364
++ V FR +A+ A+ + R ++EK +++ I+ G E +YG+D + S Y
Sbjct: 170 RKMPVREFRTLANSAQYRNPRPDLKGS-EIEKHYFDNILHG-----EPIYGADTEGSFY 222
Score = 38 (18.4 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 1484 EVDRNHA---EAYICPYCQYFE 1502
E + NHA E C CQYF+
Sbjct: 523 EREFNHARRAEWPHCAVCQYFQ 544
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 130 (50.8 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 1710 YCICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI--YICAAC 1751
YC+CR+ Y+ M+ C +C+EWYH+ CVK +S P+ YIC C
Sbjct: 1384 YCVCRE-YEYGTMVECDKCNEWYHVQCVKDVSNPDADKYICPTC 1426
Score = 122 (48.0 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 391 PWNLNNLPKLKGSILRMVHH---NITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWG 447
PWNL+NLP L ++L + N + + +GM FS W EDH +N+ +G
Sbjct: 593 PWNLHNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWTCEDHFTNLINFQFFG 652
Query: 448 DPKCWYSVPGSEAGAFEKVMRS 469
K WY +P SE FE+++ +
Sbjct: 653 AVKKWYFIPESEFEKFERLLEN 674
Score = 114 (45.2 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 488 MLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWL 541
M+ P +L G+ + +QEPG +I FP+++ + +FG N +E VN A WL
Sbjct: 752 MITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWL 805
Score = 97 (39.2 bits), Expect = 7.6e-21, Sum P(7) = 7.6e-21
Identities = 48/199 (24%), Positives = 83/199 (41%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFE-SESVSQFGG 1511
C+C E + + + C C + YH+QC++ +V A+ YICP C S + +QF
Sbjct: 1385 CVCREYEYGTM--VECDKCNEWYHVQCVK--DVSNPDADKYICPTCLVISMSSNYNQFLQ 1440
Query: 1512 SPLRFGGKRSDLRMLIELLSDSEFF-CRGIEAKDVLQEVVDVALECKTCLTDIVKFESCY 1570
+ G +L+ E+ + E + I ++++++D + L D +
Sbjct: 1441 DQITLG----ELK---EIYAHGELLNAQSINEMIIMKDLIDELTKHHIGLQD--QIARVV 1491
Query: 1571 LDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPT--I 1628
L D+ + L L+ GV N D L NL R K+LE K + I
Sbjct: 1492 LQSDITTKLDCLRFILRKLYGNGVL---LNDIWDHVL--NLIR-EYEKILEDAKKLSSEI 1545
Query: 1629 GQIQNYLKEGLLMNISPKD 1647
I+N + ++ KD
Sbjct: 1546 KPIENVPTTDNVEQVTQKD 1564
Score = 74 (31.1 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 73/380 (19%), Positives = 152/380 (40%)
Query: 1089 ADILI--HKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVA 1146
+DIL+ +K + + E I + V +D Q + K ++N F+ ++ A
Sbjct: 979 SDILLKTYKGILSDGEKIYSSIVSSAVKQQDID--QEKFKKFKDQVENLRSFIDNSNAFV 1036
Query: 1147 PASCSLLRLESLKDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKD 1206
+LL ++ + + + + + T+L K++++ + S + Q L K+
Sbjct: 1037 EKCQNLLSIKHQQRIRNGNDVFREKFYSYTDLLKLVDSIPQLNFMCSEIEQ---ILEFKN 1093
Query: 1207 DIG--DGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQNACSTLHWCKK-ALSF 1263
+I D S L+SK + I + + G S G D ++ + L W + +L
Sbjct: 1094 EIENFDKASRLLLSKKNKSIQEFDDLISLGESFGLDIPSLNFIIRIRDRLKWLRTYSLIE 1153
Query: 1264 LSVSP--SLEDVESLMAVA----EGLSTRCFSSMLWNSLIHGVKWLKRALE-VISAPCKF 1316
V P +V S++ + +G+S + + + A + +S K+
Sbjct: 1154 KGVDPYGDKNEVFSIVDLRKFLDQGISVLSTDDLPMIKEVEAILNASNAFDHEVSKFLKY 1213
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQ--EQVHQFFNLKCAQQSWSL 1374
+ D+ + G FS + + + ++ KL + + QF L+ A
Sbjct: 1214 NYVQELDLNRL--GDIAKRFSTEKLFISMNNYLELSKLHINIKLIEQFKELESASYPELK 1271
Query: 1375 MLQLKELGEAAAFDCPELEKVLSKVDK-VEN-WKQRCKEIVGTSVGDKNSLLGLLQKIK- 1431
L L F+ L K L+ V+ +++ W + C V T++ + + L K+
Sbjct: 1272 QLHNSVLESGLKFESEVLSKKLASVESWIDSSWNKLCTTKVITTLNKRIDVDHLNSKLTI 1331
Query: 1432 --QSVHRSLYIYNKPHGSVS 1449
+ V + L++ K S+S
Sbjct: 1332 NAKLVEKLLHLLYKSEFSLS 1351
Score = 71 (30.1 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 120 NKKVFFEGEELDLCKLFNAAKRFGGYDKVVKEKKWGEVFRFVRSNRKI 167
NK + LDL KLF + GG+ +V+ +K W ++ R + KI
Sbjct: 221 NKMPMIDKRPLDLYKLFQSVMIRGGFVEVINKKLWAQIGRELGYKGKI 268
Score = 62 (26.9 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 336 MEKKFWEIVEGAAGN------VEVMYGSDLDTSIYGSGFPRVCD 373
+EK +WE + + G+ +E+ G D+ I GSGF ++ D
Sbjct: 486 LEKLYWEYISSSKGSNLLNFGLELEMGKDIPNYINGSGFVKMGD 529
Score = 58 (25.5 bits), Expect = 1.5e-22, Sum P(7) = 1.5e-22
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 828 LQNYAEEAR-----SLIQEINAALSACSKISELELLYSRA--SGLPICIVESEKLSQRIS 880
+ NY E ++ LI++ SA EL+ L++ SGL ESE LS++++
Sbjct: 1240 MNNYLELSKLHINIKLIEQFKELESA--SYPELKQLHNSVLESGLKF---ESEVLSKKLA 1294
Query: 881 SAKVWRDSV-RKCISNKCPAAIE--IDVLYKLESEALDLKIDVPETDMLLKMIGQAE 934
S + W DS K + K + IDV + L S+ L I+ + LL ++ ++E
Sbjct: 1295 SVESWIDSSWNKLCTTKVITTLNKRIDVDH-LNSK---LTINAKLVEKLLHLLYKSE 1347
Score = 53 (23.7 bits), Expect = 4.0e-24, Sum P(7) = 4.0e-24
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPK 66
P + T ++ KDP+ +I + + YG K+ P+
Sbjct: 110 PCFSLTPEQTKDPIAFIESVMDVGKEYGAVKVKLPQ 145
Score = 40 (19.1 bits), Expect = 1.5e-17, Sum P(7) = 1.5e-17
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 630 ICRQYLYLSAVAC-RC 644
+CR+Y Y + V C +C
Sbjct: 1386 VCREYEYGTMVECDKC 1401
Score = 39 (18.8 bits), Expect = 8.4e-14, Sum P(6) = 8.4e-14
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 1155 LESLKDLVSQSKFLKISLKEQTELEKVIN 1183
LE+++ + QS+ I+ K+Q +++KV+N
Sbjct: 672 LENIQ-MKDQSRS-NINNKKQVDIDKVMN 698
Score = 37 (18.1 bits), Expect = 1.7e-20, Sum P(7) = 1.7e-20
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1161 LVSQSKFLKISLKEQTELEKVI 1182
++S KF++ +EQ E + I
Sbjct: 913 IISMQKFIQCQQQEQEEQQNSI 934
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 198 (74.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 52/170 (30%), Positives = 78/170 (45%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV P+ EF DPL YI +RA+ E++G+C+++PP W+P L+ F T+ Q IH+
Sbjct: 520 PVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPPPDWRPECKLN-DEMRFVTQIQHIHK 578
Query: 91 LQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDKVVK 150
L R + ++ + LK G +++ G ELDL F GG +V
Sbjct: 579 LGRRWGPNVQRLACIK--KHLKSQ-GITMDELPLIGGCELDLACFFRLINEMGGMQQVTD 635
Query: 151 EKKWGEVFRFVRSNRKISD-CAR--HVLCQXXXXXXXXXXXXXNKLNKEV 197
KKW ++ +R R D A+ CQ +L KEV
Sbjct: 636 LKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV 685
Score = 170 (64.9 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 48/143 (33%), Positives = 73/143 (51%)
Query: 306 GKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYG 365
G+ ++ +F R A F S + ++E+++W +VE +V V G +DT+ +G
Sbjct: 779 GRSVSLTTFYRTARNIMSMCF-SKEPAPAEIEQEYWRLVEEKDCHVAVHCGK-VDTNTHG 836
Query: 366 SGFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGML 425
SGFP V P + WNL LP GSILR + + GV +PWL +GM+
Sbjct: 837 SGFP-VGKSEP----------FSRHGWNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMV 884
Query: 426 FSAFCW-HFEDHCFYSMNYHHWG 447
FS CW ++H Y ++Y H G
Sbjct: 885 FSTSCWSRDQNHLPY-IDYLHTG 906
Score = 53 (23.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 1636 KEGLLMNISPKDHYRQKLMELN---------RIGSQWADVAKKVVLDSGALSLDKVFELI 1686
K GL+ ++P++ +R KL E+ R+ +Q +V K+ D G L+ + I
Sbjct: 719 KNGLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLN--DFHKCI 776
Query: 1687 AEGENLPVYLEKELKSLRARSMLYCICRKP 1716
+G + V L ++ R M C ++P
Sbjct: 777 YKGRS--VSLTTFYRTAR-NIMSMCFSKEP 803
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 337 (123.7 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 379 VDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCF 438
V+ ++ ++ + WN+ L + + + I GV P+LY GM ++F WH ED
Sbjct: 45 VNGTLYEQHVDE-WNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDL 103
Query: 439 YSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENG 498
YS+NY H+G+PK WYSVP E++ + P + L +T+++P +L + G
Sbjct: 104 YSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYG 163
Query: 499 VPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
+P V QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 164 IPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG 209
Score = 40 (19.1 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 698 DRWVHVSCAVAILEA 712
Score = 39 (18.8 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A RW E ++ C +D+++ S D+FV
Sbjct: 201 ATRRWIEYGKQAVLCS---CR-KDMVKISMDVFV 230
Score = 37 (18.1 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1495 CPYCQYFESESVSQFGG 1511
C C F++ +FGG
Sbjct: 575 CAVCMIFQTYHQVEFGG 591
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 289 (106.8 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 50/118 (42%), Positives = 70/118 (59%)
Query: 427 SAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLV 486
+ F WH ED YS+NY H+G+PK WY++P E++ + P L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 487 TMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 41 (19.5 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C +D+++ S DIFV
Sbjct: 113 ATVRWIDYGK---VAKLCTCR-KDMVKISMDIFV 142
Score = 40 (19.1 bits), Expect = 1.0e-19, Sum P(3) = 1.0e-19
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + ++ E+ +SW K
Sbjct: 416 LPEVLSIEEEVEETESWAK 434
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 289 (106.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 50/118 (42%), Positives = 70/118 (59%)
Query: 427 SAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLV 486
+ F WH ED YS+NY H+G+PK WY++P E++ + P L +
Sbjct: 4 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 63
Query: 487 TMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHG 544
T+++PSVL + G+P + QE G F+ITFP YHAGFN G NCAE+ NFA W+ +G
Sbjct: 64 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYG 121
Score = 41 (19.5 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1080 AAMRWEERAADILIHKAQMCEFEDIIRASQDIFV 1113
A +RW + + K C +D+++ S DIFV
Sbjct: 113 ATVRWIDYGK---VAKLCTCR-KDMVKISMDIFV 142
Score = 40 (19.1 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 1115 LPSLDEVQNEISTAKSWLK 1133
LP + ++ E+ +SW K
Sbjct: 342 LPEVLSIEEEVEETESWAK 360
Score = 39 (18.8 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 1018 RIQVDDLPLVEVELKKAHCREK 1039
+I V +PL ++LK CR +
Sbjct: 540 QIDVGRIPLQRLKLKCIFCRHR 561
Score = 37 (18.1 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 1384 AAAFDCPELEKVLSKVDKVENW 1405
A + + PE+ + +V++ E+W
Sbjct: 337 AESNELPEVLSIEEEVEETESW 358
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 123 (48.4 bits), Expect = 1.8e-17, Sum P(5) = 1.8e-17
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 1700 LKSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCVKL--LSAPE----IYICAACKP 1753
L+S R YC CR+ + AM+ C C EWYH+DC+ L P+ +++C+ C P
Sbjct: 1230 LESCSKRQTKYCFCRRVEEGTAMVECEICKEWYHVDCISNGELVPPDDPNVLFVCSICTP 1289
Score = 113 (44.8 bits), Expect = 1.8e-17, Sum P(5) = 1.8e-17
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 453 YSVPGSEA-GAF--EKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPG 509
YS G + +F +K+ ++L D +Q D +F+ P+ ++ NG+ +Y QE G
Sbjct: 601 YSNTGDNSKNSFPEDKIAGNTLHD--GSQSDFIFE------PNFILANGIKLYKTTQEQG 652
Query: 510 NFVITFPRSYHAGFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVV 569
+++ FP+++ G ++ FAP+ WL F ++ + K L ++ ++
Sbjct: 653 SYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWLR---FSSEAAKWTSKMGFLPGLDVNQLL 709
Query: 570 AKSDLDSKVSPYLK---RELLRVYTKE 593
+ L+S +P L+ R+L+ Y E
Sbjct: 710 INALLNSN-NPVLRKKCRDLISNYVVE 735
Score = 109 (43.4 bits), Expect = 1.8e-17, Sum P(5) = 1.8e-17
Identities = 33/113 (29%), Positives = 54/113 (47%)
Query: 358 DLDTSIYGSGFPRVCDHR-PESVDANVWNEYCN--SPWNLNNLPKLKGSILRMVHHNITG 414
++DT G G P C R P + +N N WNL+N+P + S+L+ + ++
Sbjct: 450 EIDT---GLGLP--CSMRSPGNNSSNEKFAIKNILDQWNLDNIPLNELSLLQHLDLDMAN 504
Query: 415 VMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVM 467
+GMLFS W DH S++++H G K YS+ + FE ++
Sbjct: 505 FTRTTYDIGMLFSCQGWSVSDHFLPSIDFNHLGSTKLVYSIAPKDMEKFEALI 557
Score = 77 (32.2 bits), Expect = 1.8e-17, Sum P(5) = 1.8e-17
Identities = 27/132 (20%), Positives = 54/132 (40%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICK--IVPPKSWKPPFALDLGSFTFPTKTQAI 88
P + + E DP+++ + YG K I+P +D+ F + Q
Sbjct: 119 PTFILAKKELPDPIKFYELVEDLGSVYGCVKLKIIPDADKFTQLNVDVDRLWFKARKQFF 178
Query: 89 HQLQ-ARSAACDSKTFELEYSRFLKEHVGTKLNKKVFFEGEELDLCKLFNAAKRFGGYDK 147
+ + R+ D + +K+ T++ + LDL +L + K GG++
Sbjct: 179 NSNEFQRTKIVDFYAKLYNFHNKIKKSTLTRIPS---IDKRTLDLYRLRSCVKLRGGFNA 235
Query: 148 VVKEKKWGEVFR 159
V ++K W ++ R
Sbjct: 236 VCEKKLWAQIGR 247
Score = 59 (25.8 bits), Expect = 3.8e-11, Sum P(5) = 3.8e-11
Identities = 25/107 (23%), Positives = 42/107 (39%)
Query: 1398 KVDKVENWKQRCKEIVGTSVGDKNSLLGLLQKIKQ--SVHRSLYIYNKPHGSVSMTLCMC 1455
KV K+ W Q +I+ KN + +L I + + YI + C C
Sbjct: 1191 KVFKL--WNQHLDQIM-----QKNKFIEILPSIFRCLDLKSDKYIPLESCSKRQTKYCFC 1243
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPTEV----DRNHAEAYICPYC 1498
+ + + C CK+ YH+ C+ E+ D N ++C C
Sbjct: 1244 RRVE-EGTAMVECEICKEWYHVDCISNGELVPPDDPN--VLFVCSIC 1287
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(5) = 1.8e-17
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 1159 KDLVSQSKFLKISLKEQTELEKVINNCERWQNHASSLLQDARCLLDKDDIGDGLSNSLVS 1218
+D+ + K+ LK Q ++KV ++ SL LLD ++ + +S S
Sbjct: 1059 EDIDKLGEVRKLILKYQDMMQKVRVFLKKDPPSKISLSDLEDVLLDIEEYRLPIQSSFFS 1118
Query: 1219 KIEQLITSMESA 1230
+++ +I +E+A
Sbjct: 1119 ELDYVIREIENA 1130
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 187 (70.9 bits), Expect = 6.3e-16, Sum P(4) = 6.3e-16
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 420 LYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQP 479
LY GM ++F WH ED YS+NY H+G+PK WYSVP E + + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 480 DLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVIT 514
L +T+++P +L + G+P V QE G F+ T
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 111 (44.1 bits), Expect = 6.3e-16, Sum P(4) = 6.3e-16
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 6.3e-16, Sum P(4) = 6.3e-16
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 41 (19.5 bits), Expect = 8.2e-16, Sum P(5) = 8.2e-16
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 1495 CPYCQYFESESVSQFGGSPLRFGG 1518
C C F++ +FGG GG
Sbjct: 633 CAVCMIFQTYHQVEFGGLSQSCGG 656
Score = 40 (19.1 bits), Expect = 8.2e-16, Sum P(5) = 8.2e-16
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 756 DRWVHVSCAVAILEA 770
Score = 40 (19.1 bits), Expect = 8.2e-16, Sum P(5) = 8.2e-16
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 1706 RSMLYCICRKPYDEKAMIACYQCDEW-----YHIDCVK 1738
R L C+ K ++A C QC +H+ C +
Sbjct: 790 RFKLKCVFCKKRRKRAAGCCVQCSHGRCPTAFHVSCAQ 827
Score = 39 (18.8 bits), Expect = 6.3e-16, Sum P(4) = 6.3e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 1019 IQVDDLPLVEVELKKAHCREKALKA 1043
+ V +PL +LK C+++ +A
Sbjct: 781 VDVSKIPLPRFKLKCVFCKKRRKRA 805
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 187 (70.9 bits), Expect = 6.5e-16, Sum P(4) = 6.5e-16
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 420 LYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQP 479
LY GM ++F WH ED YS+NY H+G+PK WYSVP E + + P +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQSCE 221
Query: 480 DLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVIT 514
L +T+++P +L + G+P V QE G F+ T
Sbjct: 222 AFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 111 (44.1 bits), Expect = 6.5e-16, Sum P(4) = 6.5e-16
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 33 YYPTEDEFKDPLEYICKIRAE-AERYGICKIVPPKSWKPPFALD-LGSFTFPTKTQAI 88
+YPT +EF++ YI I ++ A R G+ K+VPPK WKP + D + P Q +
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDDIDDLVIPAPIQQL 74
Score = 56 (24.8 bits), Expect = 6.5e-16, Sum P(4) = 6.5e-16
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
K TV FR++A+ K R ++E+K+W+ N + YG+D++ ++Y
Sbjct: 90 KAMTVREFRKIANSDKYCTPRYSEFE--ELERKYWK---NLTFNPPI-YGADVNGTLY 141
Score = 41 (19.5 bits), Expect = 8.5e-16, Sum P(5) = 8.5e-16
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 1495 CPYCQYFESESVSQFGGSPLRFGG 1518
C C F++ +FGG GG
Sbjct: 638 CAVCMIFQTYHQVEFGGLSQSCGG 661
Score = 40 (19.1 bits), Expect = 8.5e-16, Sum P(5) = 8.5e-16
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1729 DEWYHIDC-VKLLSA 1742
D W H+ C V +L A
Sbjct: 761 DRWVHVSCAVAILEA 775
Score = 40 (19.1 bits), Expect = 8.5e-16, Sum P(5) = 8.5e-16
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 1706 RSMLYCICRKPYDEKAMIACYQCDEW-----YHIDCVK 1738
R L C+ K ++A C QC +H+ C +
Sbjct: 795 RFKLKCVFCKKRRKRAAGCCVQCSHGRCPTAFHVSCAQ 832
Score = 39 (18.8 bits), Expect = 6.5e-16, Sum P(4) = 6.5e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 1019 IQVDDLPLVEVELKKAHCREKALKA 1043
+ V +PL +LK C+++ +A
Sbjct: 786 VDVSKIPLPRFKLKCVFCKKRRKRA 810
>FB|FBgn0027620 [details] [associations]
symbol:Acf1 "ATP-dependent chromatin assembly factor large
subunit" species:7227 "Drosophila melanogaster" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0016590 "ACF
complex" evidence=IDA;IPI] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=NAS;TAS] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016589 "NURF complex" evidence=IDA] [GO:0008623
"CHRAC" evidence=IDA;NAS] [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0003677 "DNA binding" evidence=IDA;TAS]
[GO:0031497 "chromatin assembly" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043462 "regulation of ATPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0045892 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 GO:GO:0043462 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0008544 GO:GO:0042766
GO:GO:0016584 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0016590 GO:GO:0008623 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 HSSP:Q9UIG0 FlyBase:FBgn0027620 EMBL:AJ238397
ProteinModelPortal:Q9NG24 STRING:Q9NG24 PRIDE:Q9NG24
InParanoid:Q9NG24 ArrayExpress:Q9NG24 Bgee:Q9NG24 Uniprot:Q9NG24
Length = 1476
Score = 168 (64.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFVPGK 307
+C+ C+ G E MLLCD CN G H++CL P L+ VP GNWYC +C+ S G G+
Sbjct: 1064 LCKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGNWYCNDCVKS----LGLSNGQ 1119
Query: 308 RYTVESFRRVADRAKKK 324
E ++ A + K+K
Sbjct: 1120 N---EKDKKQATKKKRK 1133
Score = 109 (43.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 22/75 (29%), Positives = 38/75 (50%)
Query: 1712 ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI-YICAACKPQAEESSTPQ-NVDGGRT 1769
+C+K + + I C QC ++H++CV L P ++C CKP + N++G
Sbjct: 1244 VCQKCFYDGGEIKCVQCRLFFHLECVHLKRPPRTDFVCKTCKPMPQRPRRRHSNMNGDHD 1303
Query: 1770 NAEFLEPKTPSPKHT 1784
E EPK P+++
Sbjct: 1304 RDEE-EPKAKRPRNS 1317
Score = 55 (24.4 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCL---RPTEVDRNHAEAYICPYCQ 1499
+C C D E++ C C+ +HL+C+ RP D ++C C+
Sbjct: 1244 VCQKCFYDGGEIK---CVQCRLFFHLECVHLKRPPRTD------FVCKTCK 1285
Score = 45 (20.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 614 RKCPEYVGTEEDPTCIICRQYLYLSAVACRCRPAA-FVC 651
+KC Y G E C+ CR + +L V + P FVC
Sbjct: 1246 QKC-FYDGGEIK--CVQCRLFFHLECVHLKRPPRTDFVC 1281
>UNIPROTKB|F5GZ99 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI00872073 ProteinModelPortal:F5GZ99 SMR:F5GZ99
Ensembl:ENST00000535014 ArrayExpress:F5GZ99 Bgee:F5GZ99
Uniprot:F5GZ99
Length = 126
Score = 179 (68.1 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALDLGSFTFPTKTQAIHQ 90
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F + Q +++
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSFRFTPRVQRLNE 79
Query: 91 LQ--ARSAACDSKTFELEYSR 109
L+ A + T E ++S+
Sbjct: 80 LEIVASKGGFEMVTKEKKWSK 100
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 186 (70.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 45/144 (31%), Positives = 66/144 (45%)
Query: 392 WNLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKC 451
WNLNNLP S R L G F WH ++ S+NY H+G PK
Sbjct: 176 WNLNNLPDSINSSNRR------------LLTGQSKCIFPWHLDEQNKCSINYLHFGAPKQ 223
Query: 452 WYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLVENGVPVYSVLQEPGNF 511
WYS+P + F K++ + P + + +P L +N + V+Q F
Sbjct: 224 WYSIPSANTDQFLKILSKEPSSNKENCPAFIRHQNIITSPDFLRKNNIKFNRVVQFQHEF 283
Query: 512 VITFPRSYHAGFNFGLNCAEAVNF 535
+ITFP ++GFN+G N E++ F
Sbjct: 284 IITFPYCMYSGFNYGYNFGESIEF 307
Score = 67 (28.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSW 68
PV+ P+ EF + +I +I GI K++PPK W
Sbjct: 13 PVFKPSMMEFANFQYFIDEITKFGIENGIVKVIPPKEW 50
Score = 47 (21.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 313 SFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVC 372
+F+ D K +G +V K++ E++EG+ E + LD+ I +
Sbjct: 24 NFQYFIDEITKFGIENGIV-KVIPPKEWLELLEGSPP-AESLKTIQLDSPIQQQA--KRW 79
Query: 373 DHRPESVDANVWNEYCNSPWNLNNLPKLKGSI 404
D V ++ NEY N +NL L S+
Sbjct: 80 DKHENGV-FSIENEYDNKSYNLTQWKNLAESL 110
>MGI|MGI:2444959 [details] [associations]
symbol:Mll3 "myeloid/lymphoid or mixed-lineage leukemia 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IDA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051568 "histone
H3-K4 methylation" evidence=ISO] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 MGI:MGI:2444959 GO:GO:0006355
GO:GO:0035556 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 HOVERGEN:HBG045586 ChiTaRS:MLL3 EMBL:AY138582
EMBL:AC116469 EMBL:AC127319 EMBL:AC134910 EMBL:AK044828
EMBL:AK054270 EMBL:AK077567 EMBL:AY036886 EMBL:AY036887
IPI:IPI00620674 IPI:IPI00623069 UniGene:Mm.332268
ProteinModelPortal:Q8BRH4 SMR:Q8BRH4 IntAct:Q8BRH4 STRING:Q8BRH4
PhosphoSite:Q8BRH4 PaxDb:Q8BRH4 PRIDE:Q8BRH4 UCSC:uc008wsv.1
HOGENOM:HOG000113602 InParanoid:Q8BRH4 OrthoDB:EOG4THVS4
Bgee:Q8BRH4 CleanEx:MM_MLL3 Genevestigator:Q8BRH4
GermOnline:ENSMUSG00000038056 Uniprot:Q8BRH4
Length = 4903
Score = 139 (54.0 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P +K VP W C C
Sbjct: 388 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 434
Score = 133 (51.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL PPL+ VP+G W C C+
Sbjct: 1002 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 1048
Score = 104 (41.7 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 30/97 (30%), Positives = 42/97 (43%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQFG 1510
C C + + L C+ CK HL+C +PT E+D E YIC YC++ +E
Sbjct: 469 CGKCYHPELQKDMLHCNMCKRWVHLECDKPTDQELDSQLKEDYICMYCKHLGAEIDPLHP 528
Query: 1511 GSPLRFGGKRSDLR--MLIELLSDSEFFCRGIEAKDV 1545
G+ + +D M IE D F KDV
Sbjct: 529 GNEVEMPELPTDYASGMEIEGTEDEVVFLEQTVNKDV 565
Score = 91 (37.1 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 24/96 (25%), Positives = 40/96 (41%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEESSTPQN-- 1763
CR +E ++ C QCD W H C L + E+ + C+ C+P S+ P +
Sbjct: 1084 CRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMPVSNVPSSDC 1143
Query: 1764 VDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQ 1799
D + K P T ++ + E G++Q
Sbjct: 1144 CDSSLVAQIVTKVKELDPPKTYTQDGVCLTESGMSQ 1179
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(4) = 1.7e-07
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 1431 KQSVHRSLYIYNKPHG-SVSMTLCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+ S+H ++ +++ ++ +C+ C S + E L CS C CYH C+
Sbjct: 930 ENSMHNTVVLFSSSDKFTLQQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV 982
Score = 70 (29.7 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 246 DQICEQCKSGLHGEVM--LLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D C C S G+++ C C + +H CL + + R W C EC
Sbjct: 340 DANCAVCDSP--GDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPEC 387
Score = 67 (28.6 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 1433 SVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHA 1490
S+ + + +K + T+C C + L+C C YH CL P V +
Sbjct: 983 SIKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGW 1042
Query: 1491 EAYICPYCQY 1500
+ C +C++
Sbjct: 1043 KCKWCVWCRH 1052
Score = 54 (24.1 bits), Expect = 6.5e-06, Sum P(5) = 6.5e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1719 EKAMIACYQCDEWYHIDCVKL 1739
E ++AC QC + YH CV +
Sbjct: 964 EGRLLACSQCGQCYHPYCVSI 984
Score = 52 (23.4 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 1701 KSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCV 1737
K R C C K D ++ C CD YH C+
Sbjct: 993 KGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCL 1030
Score = 48 (22.0 bits), Expect = 0.00041, Sum P(7) = 0.00041
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 1537 CRGIEAKDVLQEVVDVALECKTC 1559
C+ + ++ ++ V D+ +C C
Sbjct: 1107 CQNLNTEEEVENVADIGFDCSMC 1129
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(7) = 0.00041
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 1711 CICRKP----YDEKAMIACYQCDEWYHIDCVKLLSAPEIY 1746
C C + D A + D W H++C L + E+Y
Sbjct: 4395 CFCHEEGDGLTDGPARLLNLDLDLWVHLNCA--LWSTEVY 4432
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L Q+M A + ++F L+W R RR
Sbjct: 4554 LPQQMQAFHSPKALFPVGYEASRLYWSTRYANRR 4587
Score = 38 (18.4 bits), Expect = 6.5e-06, Sum P(5) = 6.5e-06
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1773 FLEPKTPSPKHTNSR 1787
F++P+ P P T SR
Sbjct: 1843 FVKPQPPPPPSTPSR 1857
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(7) = 0.00041
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 1662 QWADVAKKVVLDSGALSLDKVFELIAEG--ENLPVYLEKEL 1700
QW K V+L SG K + +G EN +EK++
Sbjct: 4189 QWCCHCKVVILGSGVRKSCKDLTFVNKGSRENTK-RMEKDI 4228
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(7) = 0.00041
Identities = 23/98 (23%), Positives = 38/98 (38%)
Query: 1576 HVISNKLTITLKAREAAGVFDRQSNSALDFALARNLWRVRVSKLLEGLTKPTIG-QIQNY 1634
H++ NK +L ++ G +S D L + EGL T+G Q+Q
Sbjct: 3771 HLLKNKKASSLLTQKPEGTLSSDESSTKDGKL------IEKQSPAEGLQ--TLGAQMQGG 3822
Query: 1635 LKEG---LLMNISPKDHYRQKLMELNRIGSQWADVAKK 1669
G L ++ +Q+ R G + A +KK
Sbjct: 3823 FGGGNSQLPKTDGASENKKQRSKRTQRTGEKAAPRSKK 3860
Score = 37 (18.1 bits), Expect = 8.0e-06, Sum P(5) = 8.0e-06
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1755 AEESSTPQNVDGGRTNAEFL-EPKTPSPKHTN 1785
A SS ++ R + FL P P P+HT+
Sbjct: 2568 ASPSSVIESPSHPR-HGNFLPRPDFPGPRHTD 2598
>UNIPROTKB|H0YMU7 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000637 InterPro:IPR001594 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00354
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0016571 EMBL:AC005631
EMBL:AC006017 EMBL:AC104692 HGNC:HGNC:13726 ChiTaRS:MLL3
EMBL:AC006474 ProteinModelPortal:H0YMU7 SMR:H0YMU7
Ensembl:ENST00000558084 Bgee:H0YMU7 Uniprot:H0YMU7
Length = 826
Score = 139 (54.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P +K VP W C C
Sbjct: 389 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 435
Score = 105 (42.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQFG 1510
C C + + L C+ CK HL+C +PT E+D E YIC YC++ +E
Sbjct: 470 CGKCYHPELQKDMLHCNMCKRWVHLECDKPTDHELDTQLKEEYICMYCKHLGAEMDRLQP 529
Query: 1511 GSPLRFGGKRSDLR--MLIELLSDSEFFCRGIEAKDV 1545
G + +D M +E D F KDV
Sbjct: 530 GEEVEIAELTTDYNNEMEVEGPEDQMVFSEQAANKDV 566
Score = 73 (30.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVKLLS------APEIYICAACK 1752
C P +K M+ C C W H++C K E YIC CK
Sbjct: 473 CYHPELQKDMLHCNMCKRWVHLECDKPTDHELDTQLKEEYICMYCK 518
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 181 (68.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 45/128 (35%), Positives = 63/128 (49%)
Query: 412 ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSL 471
I G+ P+ Y G + F WH ED S+N H + K W+ +P ++ A E+V RS+
Sbjct: 216 IPGLCYPYKYEGTALAPFTWHVEDVGLISLN-HLFQGVKVWFCIPRADRLAAEEVFRSAP 274
Query: 472 PDLFDAQP---DLLFQLVTMLNPSVLVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLN 528
A P + T+ + L GV V V+Q G V T P +YH+GF+ G
Sbjct: 275 MTATAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFSAGYT 334
Query: 529 CAEAVNFA 536
EAVNFA
Sbjct: 335 VCEAVNFA 342
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 176 (67.0 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD-K 298
D + + D +CE+C SG +LLCD+C+KG+H++CL P L VP+G+W+C C
Sbjct: 26 DSDSDWDTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSKHQIP 85
Query: 299 DSFGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKK 339
SF + K + F R+ + S S S + KK
Sbjct: 86 KSFPLIQTK---IIDFFRIKRSPDSSQISSSSDSIGKKRKK 123
>UNIPROTKB|F5GZR8 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011614 ProteinModelPortal:F5GZR8 SMR:F5GZR8
Ensembl:ENST00000543507 ArrayExpress:F5GZR8 Bgee:F5GZR8
Uniprot:F5GZR8
Length = 131
Score = 155 (59.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPK---------SWKPPFALDLGSFTF 81
PV+ P+ +EF DPL +I +IR AE+ GICKI PPK W+PPFA ++ SF F
Sbjct: 20 PVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKFWQISSVSKDWQPPFACEVKSFRF 79
Query: 82 PTKTQAIHQLQA 93
+ Q +++L+A
Sbjct: 80 TPRVQRLNELEA 91
>UNIPROTKB|Q8NEZ4 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051568 "histone
H3-K4 methylation" evidence=IDA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR000637 InterPro:IPR001214
InterPro:IPR001594 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00384
SMART:SM00541 SMART:SM00542 GO:GO:0006355 GO:GO:0035556
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 eggNOG:COG2940
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GO:GO:0035097 EMBL:AC005631 EMBL:AC006017 EMBL:AY024361
EMBL:AF264750 EMBL:AC104692 EMBL:AB040939 EMBL:AK022687
EMBL:AK075113 EMBL:AL833924 IPI:IPI00168806 IPI:IPI00375729
IPI:IPI00916332 RefSeq:NP_733751.2 UniGene:Hs.647120 PDB:2YSM
PDB:2YUK PDB:3UVL PDB:4ERY PDBsum:2YSM PDBsum:2YUK PDBsum:3UVL
PDBsum:4ERY ProteinModelPortal:Q8NEZ4 SMR:Q8NEZ4 DIP:DIP-48649N
IntAct:Q8NEZ4 STRING:Q8NEZ4 PhosphoSite:Q8NEZ4 DMDM:221222521
PaxDb:Q8NEZ4 PRIDE:Q8NEZ4 Ensembl:ENST00000262189
Ensembl:ENST00000355193 GeneID:58508 KEGG:hsa:58508 UCSC:uc003wky.3
UCSC:uc003wla.3 CTD:58508 GeneCards:GC07M151832 H-InvDB:HIX0007238
H-InvDB:HIX0016202 H-InvDB:HIX0080234 HGNC:HGNC:13726 MIM:606833
neXtProt:NX_Q8NEZ4 PharmGKB:PA30847 HOVERGEN:HBG045586
InParanoid:Q8NEZ4 KO:K09188 OMA:VDPYERP PhylomeDB:Q8NEZ4
ChiTaRS:MLL3 EvolutionaryTrace:Q8NEZ4 GenomeRNAi:58508
NextBio:65023 ArrayExpress:Q8NEZ4 Bgee:Q8NEZ4 CleanEx:HS_MLL3
Genevestigator:Q8NEZ4 GermOnline:ENSG00000055609 Uniprot:Q8NEZ4
Length = 4911
Score = 139 (54.0 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P +K VP W C C
Sbjct: 389 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 435
Score = 105 (42.0 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQFG 1510
C C + + L C+ CK HL+C +PT E+D E YIC YC++ +E
Sbjct: 470 CGKCYHPELQKDMLHCNMCKRWVHLECDKPTDHELDTQLKEEYICMYCKHLGAEMDRLQP 529
Query: 1511 GSPLRFGGKRSDLR--MLIELLSDSEFFCRGIEAKDV 1545
G + +D M +E D F KDV
Sbjct: 530 GEEVEIAELTTDYNNEMEVEGPEDQMVFSEQAANKDV 566
Score = 88 (36.0 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 1707 SMLYC-ICRKPYDEKAMIA-CYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEE 1757
S+ C +C + Y E+ +I C QCD W H C L + E+ + C+ C+P
Sbjct: 1083 SLSSCPVCYRNYREEDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMPA 1142
Query: 1758 SSTPQN 1763
S+ P +
Sbjct: 1143 SNVPSS 1148
Score = 73 (30.8 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 1431 KQSVHRSLYIYNKPHG-SVSMTLCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+ S+H ++ +++ +++ +C+ C S + E L CS C CYH C+
Sbjct: 937 ENSMHNTVVLFSSSDKFTLNQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV 989
Score = 67 (28.6 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 1433 SVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHA 1490
S+ + + +K + T+C C + L+C C YH CL P V +
Sbjct: 990 SIKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGW 1049
Query: 1491 EAYICPYCQY 1500
+ C +C++
Sbjct: 1050 KCKWCVWCRH 1059
Score = 54 (24.1 bits), Expect = 4.2e-06, Sum P(5) = 4.2e-06
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1719 EKAMIACYQCDEWYHIDCVKL 1739
E ++AC QC + YH CV +
Sbjct: 971 EGRLLACSQCGQCYHPYCVSI 991
Score = 52 (23.4 bits), Expect = 6.5e-06, Sum P(5) = 6.5e-06
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 1701 KSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCV 1737
K R C C K D ++ C CD YH C+
Sbjct: 1000 KGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCL 1037
Score = 48 (22.0 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 5/23 (21%), Positives = 13/23 (56%)
Query: 1537 CRGIEAKDVLQEVVDVALECKTC 1559
C+ + ++ ++ V D+ +C C
Sbjct: 1114 CQNLNTEEEVENVADIGFDCSMC 1136
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 1711 CICRKP----YDEKAMIACYQCDEWYHIDCVKLLSAPEIY 1746
C C + D A + D W H++C L + E+Y
Sbjct: 4403 CFCHEEGDGLTDGPARLLNLDLDLWVHLNCA--LWSTEVY 4440
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L Q+M A + ++F L+W R RR
Sbjct: 4562 LPQQMQAFHSPKALFPVGYEASRLYWSTRYANRR 4595
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 1758 SSTPQNVDGGRTN---AEFL-EPKTPSPKHTNSRKKLRKAEPGLAQKM 1801
S+ P +V +N F+ P P P+HT+ +R+ GL ++
Sbjct: 2575 SAPPGSVVEASSNLRHGNFIPRPDFPGPRHTDP---MRRPPQGLPNQL 2619
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 321 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 371
Score = 126 (49.4 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 227 KKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 283
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 284 APEGKWSCPHC 294
Score = 90 (36.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 327 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 371
Score = 55 (24.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 1708 MLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAAC 1751
M YC +C+ D ++ C C YHI C+ P+I ++C C
Sbjct: 327 MEYCRVCK---DGGELLCCDACISSYHIHCLNP-PLPDIPNGEWLCPRC 371
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 164 (62.8 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
Q C+ C SG + + +LLCD C+KG+H YC P + ++P G+WYC EC+N
Sbjct: 2639 QNCQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYECVN 2687
Score = 68 (29.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 23/94 (24%), Positives = 34/94 (36%)
Query: 1701 KSLRARSMLYCICRKPYDEKAMIACYQCDEWYHIDCV--KLLSAPE-IYICAACKPQAEE 1757
K+ R + C +P MI C C YH DC LL P + C C +A
Sbjct: 2688 KATNERKCIVCGGHRPSPVGKMIYCDLCPRAYHADCYIPPLLKVPRGKWYCHGCISRAPP 2747
Query: 1758 SSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLR 1791
P+ G T+ + + + + K R
Sbjct: 2748 ---PKKRSAGGTSGSSSKSRRDRDRESGGSAKRR 2778
Score = 48 (22.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 1439 YIYNKPHGSVSMTLCMCC--ESDSKELEFLICSACKDCYHLQCLRP 1482
Y Y + + + C+ C S + + C C YH C P
Sbjct: 2681 YCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPRAYHADCYIP 2726
>UNIPROTKB|F1NW66 [details] [associations]
symbol:Gga.49064 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 Pfam:PF00505 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0051568 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AADN02000310 EMBL:AADN02000311 EMBL:AADN02000312
IPI:IPI00593571 Ensembl:ENSGALT00000010124 Uniprot:F1NW66
Length = 4880
Score = 133 (51.9 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL PPL+ VP+G W C C+
Sbjct: 962 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 1008
Score = 132 (51.5 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P + VP W C C
Sbjct: 337 KVCQNCKHSGEDNKMLVCDTCDKGYHTFCLQPVMDSVPTNGWKCKNC 383
Score = 100 (40.3 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEE 1757
S+ C IC + Y DE+ +I C QCD W H C L + E+ + C C+P
Sbjct: 1036 SLSTCPICYRTYRDEELIIQCRQCDRWMHAICQNLNTEEEVENIADMGFDCTICRPYIPP 1095
Query: 1758 SSTPQ-NVDGGRTNAEFL-EPKTPSPKHTNSRKKLRKAEPGLAQ 1799
++ P + A+ + + K P T ++ + E G++Q
Sbjct: 1096 TNVPSLDCCDSSVGAQIISKSKELDPPKTYTQDGVCLTESGMSQ 1139
Score = 97 (39.2 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 1710 YC--ICRKPYDEKAMIACYQCDEWYHIDC-----VKLLSAPEIYICAACKPQAEESSTPQ 1762
+C +C + + +K M+ C+ C W H++C ++L S + YIC CK Q E T Q
Sbjct: 418 FCDKLCLQDF-QKDMLHCHMCKRWIHMECDRSPGIELESQLKDYICTLCK-QGEGDQT-Q 474
Query: 1763 NVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIAN 1806
+ D T+ EP + + TN + E Q+ L I N
Sbjct: 475 SCDVMDTSELIPEPASIAGC-TNEMEMESGGEDVAFQEQLVIGN 517
Score = 75 (31.5 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 1431 KQSVHRSLYIY-NKPHGSVSMTLCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+ S+H ++ ++ N ++ +C+ C S + E L CS C CYH C+
Sbjct: 890 ENSMHNTVVLFSNSDKFTLHQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV 942
Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(4) = 1.4e-07
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 1447 SVSMTLC--MCCESDSKELEFLICSACKDCYHLQCLRPTEVD-RNHAEAYICPYCQYFES 1503
++S C +C + K++ L C CK H++C R ++ + + YIC C+ E
Sbjct: 413 NLSCPFCDKLCLQDFQKDM--LHCHMCKRWIHMECDRSPGIELESQLKDYICTLCKQGEG 470
Query: 1504 E 1504
+
Sbjct: 471 D 471
Score = 67 (28.6 bits), Expect = 3.8e-07, Sum P(5) = 3.8e-07
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 1433 SVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHA 1490
S+ + + +K + T+C C + L+C C YH CL P V +
Sbjct: 943 SIKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGW 1002
Query: 1491 EAYICPYCQY 1500
+ C +C++
Sbjct: 1003 KCKWCVWCRH 1012
Score = 48 (22.0 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 1185 CERWQN-HASSLLQDARCLLDKDDIGDGLSNSLVSKIEQLITSMESAANC 1233
C+R S L+D C L K GD + V +LI S A C
Sbjct: 445 CDRSPGIELESQLKDYICTLCKQGEGDQTQSCDVMDTSELIPEPASIAGC 494
Score = 41 (19.5 bits), Expect = 8.5e-05, Sum P(4) = 8.5e-05
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYIC 1495
C+ C+S ++ + L C C CL+ + D H ++C
Sbjct: 401 CLVCDSCYQQQDNLSCPFCDKL----CLQDFQKDMLHC--HMC 437
Score = 40 (19.1 bits), Expect = 6.6e-08, Sum P(5) = 6.6e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L Q+M A ++ ++F L+W R RR
Sbjct: 4531 LPQQMQAFHSSKALFPVGYEASRLYWSMRYANRR 4564
>UNIPROTKB|F1MYZ3 [details] [associations]
symbol:Bt.18271 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042800 "histone methyltransferase activity (H3-K4
specific)" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00109 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0051568
GeneTree:ENSGT00690000101661 OMA:VDPYERP EMBL:DAAA02012048
EMBL:DAAA02012049 IPI:IPI00688241 Ensembl:ENSBTAT00000028347
Uniprot:F1MYZ3
Length = 4824
Score = 139 (54.0 bits), Expect = 7.5e-08, Sum P(5) = 7.5e-08
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P +K VP W C C
Sbjct: 305 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 351
Score = 95 (38.5 bits), Expect = 7.5e-08, Sum P(5) = 7.5e-08
Identities = 28/97 (28%), Positives = 39/97 (40%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESESVSQFG 1510
C C + + L C+ CK HL+C +P E D E YIC YC++ +E
Sbjct: 386 CGKCYHPELQKDMLHCNMCKRWVHLECDKPADHEPDLQLREEYICTYCKHLAAEMGPLQP 445
Query: 1511 GSPLRFGGKRSDLR--MLIELLSDSEFFCRGIEAKDV 1545
G + +D M +E D F KDV
Sbjct: 446 GEEVEMAELPADYNNEMEVEGPEDHMIFLEQAINKDV 482
Score = 84 (34.6 bits), Expect = 7.5e-08, Sum P(5) = 7.5e-08
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEESSTPQN 1763
CR +E ++ C QCD W H C + E+ + C+ C+P S+ P +
Sbjct: 999 CRNYREEDLILQCRQCDRWMHAVCQNFSTEEEVENVADIGFDCSLCRPYMPTSNVPSS 1056
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(6) = 0.00012
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 1431 KQSVHRSLYIYNKPHG-SVSMTLCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+ S+H ++ +++ ++ +C+ C S + E L CS C CYH C+
Sbjct: 845 ENSMHNTVVLFSSSDKFTLHQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCV 897
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(6) = 0.00028
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 1433 SVHRSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHA 1490
S+ + + +K + T+C C + L+C C YH CL P V +
Sbjct: 898 SIKITKVVLSKGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGW 957
Query: 1491 EAYICPYCQY 1500
+ C +C++
Sbjct: 958 KCKWCVWCRH 967
Score = 54 (24.1 bits), Expect = 5.2e-05, Sum P(5) = 5.2e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1719 EKAMIACYQCDEWYHIDCVKL 1739
E ++AC QC + YH CV +
Sbjct: 879 EGRLLACSQCGQCYHPYCVSI 899
Score = 52 (23.4 bits), Expect = 6.5e-05, Sum P(5) = 6.5e-05
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 1701 KSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCV 1737
K R C C K D ++ C CD YH C+
Sbjct: 908 KGWRCLECTVCEACGKATDPGRLLLCDDCDISYHTYCL 945
Score = 39 (18.8 bits), Expect = 7.5e-08, Sum P(5) = 7.5e-08
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L Q+M A + +++F L+W R RR
Sbjct: 4475 LPQQMPAFHSPTALFPVGYEASRLYWSTRYANRR 4508
Score = 38 (18.4 bits), Expect = 6.5e-05, Sum P(5) = 6.5e-05
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 1734 IDCVKLLSAPEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSP 1781
++ K S P I A P E+++ V + P+ P P
Sbjct: 3527 VESAKAPSTPHSDITAPLTPNVPETTSMPAVPVPSEPPQLAGPEAPEP 3574
Score = 37 (18.1 bits), Expect = 7.5e-08, Sum P(5) = 7.5e-08
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1776 PKTPSPKHTNSRKKLRKAEP 1795
P P+P + ++ L +A+P
Sbjct: 1772 PPPPAPSRLSVQESLSQAQP 1791
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(6) = 0.00012
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 1019 IQVDDLPLVEVELKKAHCRE 1038
+ +D P VE ++K C+E
Sbjct: 645 MDLDAAPAVESQVKDGLCQE 664
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 140 (54.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 463 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 513
Score = 127 (49.8 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 370 KKKVLGCPTVTGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 426
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 427 APEGKWSCPHC 437
Score = 90 (36.7 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 469 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 513
Score = 55 (24.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 1708 MLYC-ICRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAAC 1751
M YC +C+ D ++ C C YHI C+ P+I ++C C
Sbjct: 469 MEYCRVCK---DGGELLCCDACISSYHIHCLNP-PLPDIPNGEWLCPRC 513
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 136 (52.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL PPL++VP+G+W C C+
Sbjct: 18 VCEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGSWKCKWCV 64
Score = 76 (31.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI 1745
S+ C +C + Y +E+ ++ C QCD W H C L S ++
Sbjct: 92 SLTVCPVCTRSYREEELILQCRQCDRWVHGSCQGLNSDEDV 132
Score = 61 (26.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 1449 SMTLCMCCESDSKELEFLI-CSACKDCYHLQC--LRPTEVDRNHA-EAYICPYCQ 1499
S+T+C C +E E ++ C C H C L E N A E + C C+
Sbjct: 92 SLTVCPVCTRSYREEELILQCRQCDRWVHGSCQGLNSDEDVENAADEGFDCTLCR 146
Score = 42 (19.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 1537 CRGIEAKDVLQEVVDVALECKTC 1559
C+G+ + + ++ D +C C
Sbjct: 123 CQGLNSDEDVENAADEGFDCTLC 145
>UNIPROTKB|F1LXK8 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0033148
GO:GO:0035097 GeneTree:ENSGT00690000101661 IPI:IPI00560982
Ensembl:ENSRNOT00000040635 ArrayExpress:F1LXK8 Uniprot:F1LXK8
Length = 2383
Score = 135 (52.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 128 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 186
Score = 90 (36.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKP 1753
S++ C IC PY +E +I C C+ W H C L + E+ + C +C+P
Sbjct: 202 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDEVEQAADEGFDCVSCQP 257
>UNIPROTKB|J9NSP5 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03015073 Ensembl:ENSCAFT00000045185 Uniprot:J9NSP5
Length = 4515
Score = 135 (52.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 791 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 849
Score = 131 (51.2 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 164 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 210
Score = 88 (36.0 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKP 1753
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P
Sbjct: 865 SLVTCPICHTPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQP 920
Score = 66 (28.3 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 741 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 771
Score = 65 (27.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 781 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 828
Score = 62 (26.9 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 787 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 821
>UNIPROTKB|G3MZF2 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:DAAA02012952
Ensembl:ENSBTAT00000063707 Uniprot:G3MZF2
Length = 5420
Score = 135 (52.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1366 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1424
Score = 131 (51.2 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 93 (37.8 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1440 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1499
Query: 1758 SSTP 1761
+ P
Sbjct: 1500 PAAP 1503
Score = 66 (28.3 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1316 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1346
Score = 65 (27.9 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 1356 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 1403
Score = 62 (26.9 bits), Expect = 9.7e-07, Sum P(4) = 9.7e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1362 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1396
Score = 49 (22.3 bits), Expect = 4.0e-07, Sum P(4) = 4.0e-07
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 1761 PQNVDGGRTNAEFLEPKTPSPKHT--------NSRKKLRKAEPGL 1797
PQ + + +P TP PK +SRKKLRK E G+
Sbjct: 4385 PQGTPSTKEDTAARKPLTPKPKRVQKASDRLVSSRKKLRK-EDGV 4428
>UNIPROTKB|E1B9N8 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168
GO:GO:0033148 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0035097 GeneTree:ENSGT00690000101661 OMA:PPNLGFV
EMBL:DAAA02012952 IPI:IPI00685960 Ensembl:ENSBTAT00000019193
Uniprot:E1B9N8
Length = 5448
Score = 135 (52.6 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1394 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1452
Score = 131 (51.2 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 93 (37.8 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1468 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1527
Query: 1758 SSTP 1761
+ P
Sbjct: 1528 PAAP 1531
Score = 66 (28.3 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1344 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1374
Score = 65 (27.9 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 1384 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 1431
Score = 62 (26.9 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1390 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1424
Score = 49 (22.3 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 1761 PQNVDGGRTNAEFLEPKTPSPKHT--------NSRKKLRKAEPGL 1797
PQ + + +P TP PK +SRKKLRK E G+
Sbjct: 4413 PQGTPSTKEDTAARKPLTPKPKRVQKASDRLVSSRKKLRK-EDGV 4456
>TAIR|locus:2195945 [details] [associations]
symbol:AT1G77250 "AT1G77250" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:BT025330
IPI:IPI00544228 RefSeq:NP_177849.2 UniGene:At.50042
ProteinModelPortal:Q1JPM3 SMR:Q1JPM3 PaxDb:Q1JPM3 PRIDE:Q1JPM3
EnsemblPlants:AT1G77250.1 GeneID:844061 KEGG:ath:AT1G77250
TAIR:At1g77250 eggNOG:NOG147697 HOGENOM:HOG000090483
InParanoid:Q1JPM3 OMA:CQHAFLN PhylomeDB:Q1JPM3
Genevestigator:Q1JPM3 Uniprot:Q1JPM3
Length = 522
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
+C C + + ++LCD C+ +H+YC+ PP + VP G W+C C
Sbjct: 404 LCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTAC 449
Score = 117 (46.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 234 KVCHKVD--KEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCL 291
K C + + D + IC+ C L CD C +HV C P K +P +WYCL
Sbjct: 226 KPCPNAENIRNDSVSDICKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMPTHSWYCL 285
Query: 292 EC 293
+C
Sbjct: 286 DC 287
Score = 90 (36.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 1449 SMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499
S LC C +D + + ++C C D YH+ C+RP + E + C C+
Sbjct: 401 SSCLCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGE-WFCTACK 450
Score = 77 (32.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 1711 CICRK---PYDEKAMIACYQCDEWYHIDCVK--LLSAPE-IYICAACK 1752
C+CR D+ ++ C CD+ YHI C++ S P + C ACK
Sbjct: 403 CLCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTACK 450
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 1550 VDVALECKTCLTDIVKFESCYLDKDLH 1576
VD + ECK + + SC ++ ++H
Sbjct: 318 VDTSTECKEDSNESEENSSCNMNHEVH 344
Score = 41 (19.5 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1456 CESDSKELEF-LICSACKDCYHLQCLRPTEVDR 1487
C+ DS E E C+ + +H++ R +E+ R
Sbjct: 324 CKEDSNESEENSSCNMNHEVHHVEMSRDSELCR 356
>UNIPROTKB|F1NFV8 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008623 "CHRAC" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AADN02003387 EMBL:AADN02003388 EMBL:AADN02003389
IPI:IPI00585200 Ensembl:ENSGALT00000016289 Uniprot:F1NFV8
Length = 1522
Score = 165 (63.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 52/178 (29%), Positives = 82/178 (46%)
Query: 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFV 304
L+ C+ C+ E M+LCD C++G+H YC+ P LK +P G+W+C EC + S
Sbjct: 1110 LNARCKVCRKKGDAESMVLCDGCDRGYHTYCIRPKLKIIPEGDWFCPECRPKQR-SRRLS 1168
Query: 305 PGKRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIY 364
+R +VES +A+R + + S R Q E++ +E E E D+ S +
Sbjct: 1169 SRQRPSVESDEEMAERIEGEEEASYDEMR-QSEEEDYE--EEHEEEDESQEEEDMSPSKH 1225
Query: 365 GSG---FP---RVCD-HRPESVDANVWNEYCNSPWNLNNLPKLKGSILRMVHHNITGV 415
G FP R + P S N+ + + + N PK GS R+ + V
Sbjct: 1226 GRPQVKFPLKMRAAKLNNPFS-SRNIQRQARYASRSQQNTPKQAGSSSRVTRRGLRKV 1282
Score = 51 (23.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 12/60 (20%), Positives = 33/60 (55%)
Query: 1092 LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCS 1151
L+ K Q+ ++ DII+ + ++ +++ + ++ A ++++ EL ++ F P + S
Sbjct: 1425 LVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKL--ASEFIEDIELMFSNCFEYNPRNTS 1482
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 145 (56.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 375 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 429
Query: 289 YCLEC 293
C C
Sbjct: 430 LCPRC 434
Score = 123 (48.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 313 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 361
Score = 91 (37.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 390 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 434
Score = 48 (22.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHK 556
PG F S AG G+N A A V +DW PH A + + H+
Sbjct: 1063 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHR 1110
>TAIR|locus:2144841 [details] [associations]
symbol:ATXR5 "AT5G09790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IEP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0046976 "histone methyltransferase activity
(H3-K27 specific)" evidence=IDA] [GO:0070734 "histone H3-K27
methylation" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IGI] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 SMART:SM00249 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 GO:GO:0006275 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0009294 GO:GO:0046976
IPI:IPI00775647 RefSeq:NP_001078559.1 UniGene:At.27076
ProteinModelPortal:F4KFB9 SMR:F4KFB9 PRIDE:F4KFB9
EnsemblPlants:AT5G09790.2 GeneID:830839 KEGG:ath:AT5G09790
OMA:TFIAEYT ArrayExpress:F4KFB9 Uniprot:F4KFB9
Length = 379
Score = 151 (58.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 233 VKVCHKVDKEDE---LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWY 289
V V + ++EDE + CE+C SG + +LLCD+C++G+H+ CL P + VP G W
Sbjct: 48 VPVVEQEEEEDEDSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWL 107
Query: 290 CLECLN-------SDKDSFGFVPGKRYTVESFR-RVADRAKKKRFRSGSASRVQMEKKFW 341
C++C + S K F +++T ++ + ++ +KR RS S + + +K
Sbjct: 108 CVDCSDQRPVRRLSQKKILHFFRIEKHTHQTDKLELSQEETRKRRRSCSLTVKKRRRKLL 167
Query: 342 EIV 344
+V
Sbjct: 168 PLV 170
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 145 (56.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 401 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 455
Query: 289 YCLEC 293
C C
Sbjct: 456 LCPRC 460
Score = 123 (48.4 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 339 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 91 (37.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 416 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 460
Score = 48 (22.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHK 556
PG F S AG G+N A A V +DW PH A + + H+
Sbjct: 1089 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHR 1136
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 126 (49.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D C C G G+ +L CD C +H+ CL+PPL +P G+W+C C
Sbjct: 61 DDYCSGCGDG--GD-LLCCDNCQASFHLICLNPPLNEIPSGDWFCDSC 105
Score = 84 (34.6 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESES 1505
C C+ S + + + C+ C C+H CL P + + +ICP + S S
Sbjct: 197 CQSCKDSSNQTDIVQCNRCNSCFHTFCLEPPLIYK--PSYWICPKHNDYTSPS 247
Score = 57 (25.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPEIYIC 1748
C+ ++ ++ C +C+ +H C++ L+ P +IC
Sbjct: 200 CKDSSNQTDIVQCNRCNSCFHTFCLEPPLIYKPSYWIC 237
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 140 (54.3 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 446 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 496
Score = 127 (49.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 352 KKKVLGCPAVAGEEEIDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 408
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 409 APEGKWSCPHC 419
Score = 90 (36.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 452 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 496
Score = 60 (26.2 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 13/66 (19%), Positives = 30/66 (45%)
Query: 522 GFNFGLNCAEAVNFAPADWLPHGGFGADLYQQYHKAAVLSHEELLCVVAKSDLDSKVSPY 581
G L A+ V +DW PH A + + H+ + + V ++ ++ +++
Sbjct: 1136 GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMIYRFVTRASVEERITQV 1193
Query: 582 LKRELL 587
KR+++
Sbjct: 1194 AKRKMM 1199
Score = 40 (19.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1852 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1898
>ZFIN|ZDB-GENE-070705-340 [details] [associations]
symbol:mll3b "myeloid/lymphoid or mixed-lineage
leukemia 3b" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR000637 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS00354 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00384 SMART:SM00541 SMART:SM00542 ZFIN:ZDB-GENE-070705-340
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:BX324233 EMBL:BX908750 IPI:IPI00932089
Ensembl:ENSDART00000112279 ArrayExpress:F1R598 Bgee:F1R598
Uniprot:F1R598
Length = 4879
Score = 127 (49.8 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ CK ML+CD C+KG+H +CL P + +P W C C
Sbjct: 378 KVCQTCKEPGEDTKMLVCDVCDKGYHTFCLKPAMDSIPTNGWRCKNC 424
Score = 86 (35.3 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACK---PQ 1754
S+ C +C++ Y +E+ ++ C QCD W H C + S E+ + C C+ P
Sbjct: 1077 SLASCPLCQQEYKEEEIILQCRQCDRWMHASCQGIHSEEEVEKVADTSFDCNLCQGHIPL 1136
Query: 1755 AEESSTPQNVDGGRTNAEFLEPK-TPSPKH----TNSRKKLRKAEPGLAQKMLAIANNSS 1809
+ TP ++ F+ + T + H T ++ + E GL+Q + ++AN +S
Sbjct: 1137 SPAPGTPSKSSLDFADSVFMPQRVTKTRDHDLMRTYTQDGVCLTESGLSQ-LQSLANAAS 1195
Score = 68 (29.0 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 1435 HRSLYIYNKPHGSVSMTLCMCCESDSKELE--FLICSACKDCYHLQCLRPTEVDRNHA-- 1490
H SL N + C+C + +++ L C CK ++ +C RP+E H
Sbjct: 440 HNSLLCQNCGDQQDTTLSCLCPSNVVPDIQKDLLSCHQCKRWFNPECERPSE-GHTHPQP 498
Query: 1491 -EAYICPYCQYFESES 1505
E +IC C+ ES
Sbjct: 499 KEDHICSTCRTTGIES 514
Score = 58 (25.5 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 38/161 (23%), Positives = 65/161 (40%)
Query: 1464 EFLICSACKDCYHLQCLRPTE--VDRNHAEAYICPYCQY--FESESV-SQFGG--SPLRF 1516
+ L C CK ++ +C RP+E E +IC C+ ES V ++ G + ++
Sbjct: 471 DLLSCHQCKRWFNPECERPSEGHTHPQPKEDHICSTCRTTGIESGHVCTEADGVQAEIQS 530
Query: 1517 GGKRSDLRMLIELLSDSE-FFCRGIEAKDVLQEVVDVALEC---KTCLT-------DIVK 1565
+ L+ +DSE + IE ++E+ + + K + D+ K
Sbjct: 531 DVGAEESTQLVPSNNDSEPAKVQDIEPHQPVREMQNEEKQTTNEKQMMEIGADVGGDLTK 590
Query: 1566 FESCYLDKDLHVISNKLTITLKAREAAGVFDRQSNSALDFA 1606
ES + H ++T RE G Q+ LDFA
Sbjct: 591 PESS--ETSHHSAEKEMTSDASPRETKGPEGEQTEQKLDFA 629
Score = 56 (24.8 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 1719 EKAMIACYQCDEWYHIDCVKL 1739
E +IAC QC + YH CV +
Sbjct: 965 EGRLIACAQCGQCYHPYCVNI 985
>UNIPROTKB|O14686 [details] [associations]
symbol:MLL2 "Histone-lysine N-methyltransferase MLL2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051568 "histone H3-K4 methylation" evidence=ISS] [GO:0006342
"chromatin silencing" evidence=ISS] [GO:0001555 "oocyte growth"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Prosite:PS00518 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0006342 GO:GO:0033148 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0051568 GO:GO:0035097 EMBL:AC011603 GO:GO:0001555
Orphanet:2322 EMBL:AF010403 EMBL:AF010404 IPI:IPI00297859
IPI:IPI00377245 PIR:T03454 PIR:T03455 RefSeq:NP_003473.3
UniGene:Hs.731384 PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ
ProteinModelPortal:O14686 SMR:O14686 DIP:DIP-37875N IntAct:O14686
MINT:MINT-1192941 STRING:O14686 PhosphoSite:O14686 PaxDb:O14686
PRIDE:O14686 Ensembl:ENST00000301067 GeneID:8085 KEGG:hsa:8085
UCSC:uc001rta.4 CTD:8085 GeneCards:GC12M049412 HGNC:HGNC:7133
HPA:HPA035977 MIM:147920 MIM:602113 neXtProt:NX_O14686
PharmGKB:PA30846 HOVERGEN:HBG006738 InParanoid:O14686 KO:K09187
OMA:PPNLGFV ChiTaRS:MLL2 GenomeRNAi:8085 NextBio:30706
ArrayExpress:O14686 Bgee:O14686 CleanEx:HS_MLL2
Genevestigator:O14686 GermOnline:ENSG00000167548 Uniprot:O14686
Length = 5537
Score = 135 (52.6 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1429 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1487
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 90 (36.7 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1503 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1562
Query: 1758 SSTP 1761
P
Sbjct: 1563 PVAP 1566
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1379 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1409
Score = 65 (27.9 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 1419 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 1466
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1425 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1459
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 1762 QNVDGGRTNAEFLEPKTPSPKHT--------NSRKKLRKAEPGL 1797
Q + +A +P TP PK +SRKKLRK E G+
Sbjct: 4503 QGTPSNKEDAAARKPLTPKPKRVQKASDRLVSSRKKLRK-EDGV 4545
>UNIPROTKB|E2RQ26 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03015073 Ensembl:ENSCAFT00000013872 Uniprot:E2RQ26
Length = 5563
Score = 135 (52.6 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1422 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1480
Score = 131 (51.2 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 93 (37.8 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1496 SLVTCPICHTPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1555
Query: 1758 SSTP 1761
+ P
Sbjct: 1556 PAAP 1559
Score = 66 (28.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1372 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1402
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 1412 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 1459
Score = 62 (26.9 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1418 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1452
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 1762 QNVDGGRTNAEFL---EPKTPSPKHT--------NSRKKLRKAEPGL 1797
Q + G +N E +P TP PK +SRKKLRK E G+
Sbjct: 4526 QKLQGTPSNKEDTAARKPVTPKPKRVQKASDRLVSSRKKLRK-EDGV 4571
>UNIPROTKB|J9P0X8 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
OMA:PPNLGFV EMBL:AAEX03015073 Ensembl:ENSCAFT00000045560
Uniprot:J9P0X8
Length = 5671
Score = 135 (52.6 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1527 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1585
Score = 131 (51.2 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 93 (37.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1601 SLVTCPICHTPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1660
Query: 1758 SSTP 1761
+ P
Sbjct: 1661 PAAP 1664
Score = 66 (28.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1477 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1507
Score = 65 (27.9 bits), Expect = 0.00056, Sum P(4) = 0.00056
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 1700 LKSLRARSMLYC-ICRKPYDEKAMIACYQCDEWYHIDCVK--LLSAPE 1744
LK R + C +C + D ++ C CD YH C+ LL+ P+
Sbjct: 1517 LKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPK 1564
Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1523 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1557
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 1762 QNVDGGRTNAEFL---EPKTPSPKHT--------NSRKKLRKAEPGL 1797
Q + G +N E +P TP PK +SRKKLRK E G+
Sbjct: 4634 QKLQGTPSNKEDTAARKPVTPKPKRVQKASDRLVSSRKKLRK-EDGV 4679
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 140 (54.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 450 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 126 (49.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 356 KKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 412
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 413 APEGKWSCPHC 423
Score = 90 (36.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 456 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 500
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1125 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1181
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1182 YRFVTRASVEERITQVAKRKMM 1203
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1856 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1902
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 145 (56.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 317 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 371
Query: 289 YCLEC 293
C C
Sbjct: 372 LCPRC 376
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 255 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 303
Score = 91 (37.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 332 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 376
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1005 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1061
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1062 YRFVTRASVEERITQVAKRKMM 1083
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1390 PELEKVLSKVDKVENWKQRCKEIVGTSV-GDK 1420
PE EK+L K++ ++ K KE + T GDK
Sbjct: 1528 PEKEKILDKLE-TDDTKAEEKEPIETQQNGDK 1558
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 145 (56.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 333 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 387
Query: 289 YCLEC 293
C C
Sbjct: 388 LCPRC 392
Score = 123 (48.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 271 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 319
Score = 91 (37.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 348 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 392
Score = 62 (26.9 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1021 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1077
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1078 YRFVTRASVEERITQVAKRKMM 1099
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 141 (54.7 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 355 EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 405
Score = 123 (48.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 284 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 332
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 361 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 405
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1035 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1091
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1092 YRFVTRASVEERITQVAKRKMM 1113
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV +L I + R + SE
Sbjct: 1742 NKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPV-AARLQMSE 1788
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 24/128 (18%), Positives = 54/128 (42%)
Query: 736 VLQGLFSSDAY-GTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWS 794
+L F S+ + G L +FL F++ ++ + + + +D H A
Sbjct: 1659 ILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPA---M 1715
Query: 795 SLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSAC-SKIS 853
+L +E L ++ L + L N+P + +L + L+ ++ A ++ S +S
Sbjct: 1716 ALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLS 1775
Query: 854 ELELLYSR 861
+ + +R
Sbjct: 1776 RIPPVAAR 1783
>DICTYBASE|DDB_G0282427 [details] [associations]
symbol:DDB_G0282427 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 dictyBase:DDB_G0282427 Pfam:PF00505
EMBL:AAFI02000047 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 RefSeq:XP_640043.1 ProteinModelPortal:Q54SJ6
EnsemblProtists:DDB0220651 GeneID:8623570 KEGG:ddi:DDB_G0282427
InParanoid:Q54SJ6 OMA:YMNINRE Uniprot:Q54SJ6
Length = 795
Score = 152 (58.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
CE C H E ML CD C+KG+H +CL+PPL P G W C +C
Sbjct: 618 CELCDDSGHDEKMLFCDVCDKGYHTFCLTPPLSQTPEGGWRCNDC 662
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 127 (49.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1670 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1728
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2572 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2631
Query: 1729 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1760
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2632 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2666
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 248 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 295
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1548 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1604
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 1019 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 1076
Query: 1605 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1637
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 1077 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 1110
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1541 EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1579
+ K V+ + A+ T T + K + D ++ VIS
Sbjct: 1616 DEKTVVSSTENCAISTVTTTTTVTKLTTPATDSNVDVIS 1654
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDL 359
K Y+ + ++ K K+ RSG+A + +KF + + + ++ V+ DL
Sbjct: 1686 KEYSTKDKVKLMKFTKPKKTRSGTA--LPSYRKF--VTKSSKKSIFVLPNDDL 1734
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 127 (49.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 1670 VVLDSGALSLDKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDE-KAMIACYQC 1728
V + S D+ +L A + K + + LYCIC+ PYDE K I C +C
Sbjct: 2585 VPISSQKRKRDEERDLSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRC 2644
Query: 1729 DEWYHIDCVKLLSAP----EIYICAACKPQAEESST 1760
WYH CV +L + + Y+C C+ E++ T
Sbjct: 2645 QNWYHGRCVGILQSEADLIDEYVCPQCQ-STEDAMT 2679
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 248 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 295
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 23/94 (24%), Positives = 41/94 (43%)
Query: 1548 EVVDVA--LECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAR-EAAGVFDRQSNSALD 1604
++++V+ +TC VK S LD L + T+ K R E + N +
Sbjct: 889 DIINVSEGFHLRTCYKRKVK--SSKLDGLLERRIKQFTLEEKQRLERMKLEASAKNGGIQ 946
Query: 1605 -FALARNLWRVRVSKLLEGLTKPTIGQIQNYLKE 1637
+ +NL +++ K+ EG T Q Q Y+ +
Sbjct: 947 SLSSQKNLDELQMKKVKEGSQSVTSSQNQTYVSD 980
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1541 EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVIS 1579
+ K V+ + A+ T T + K + D ++ VIS
Sbjct: 1486 DEKTVVSSTENCAISTVTTTTTVTKLTTPATDSNVDVIS 1524
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 307 KRYTVESFRRVADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDL 359
K Y+ + ++ K K+ RSG+A + +KF + + + ++ V+ DL
Sbjct: 1556 KEYSTKDKVKLMKFTKPKKTRSGTA--LPSYRKF--VTKSSKKSIFVLPNDDL 1604
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 141 (54.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 408 EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 458
Score = 123 (48.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 337 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 385
Score = 91 (37.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 414 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 458
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1087 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1143
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1144 YRFVTRASVEERITQVAKRKMM 1165
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV +L I + R + SE
Sbjct: 1844 NKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPV-AARLQMSE 1890
Score = 40 (19.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 24/128 (18%), Positives = 54/128 (42%)
Query: 736 VLQGLFSSDAY-GTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWS 794
+L F S+ + G L +FL F++ ++ + + + +D H A
Sbjct: 1761 ILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPA---M 1817
Query: 795 SLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSAC-SKIS 853
+L +E L ++ L + L N+P + +L + L+ ++ A ++ S +S
Sbjct: 1818 ALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLS 1877
Query: 854 ELELLYSR 861
+ + +R
Sbjct: 1878 RIPPVAAR 1885
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 145 (56.1 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 401 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 455
Query: 289 YCLEC 293
C C
Sbjct: 456 LCPRC 460
Score = 123 (48.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 339 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 91 (37.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 416 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 460
Score = 62 (26.9 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1089 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1145
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1146 YRFVTRASVEERITQVAKRKMM 1167
Score = 44 (20.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV +L I + R + SE
Sbjct: 1850 NKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPV-AARLQMSE 1896
Score = 40 (19.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/128 (18%), Positives = 54/128 (42%)
Query: 736 VLQGLFSSDAY-GTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWS 794
+L F S+ + G L +FL F++ ++ + + + +D H A
Sbjct: 1767 ILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPA---M 1823
Query: 795 SLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSAC-SKIS 853
+L +E L ++ L + L N+P + +L + L+ ++ A ++ S +S
Sbjct: 1824 ALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLS 1883
Query: 854 ELELLYSR 861
+ + +R
Sbjct: 1884 RIPPVAAR 1891
>POMBASE|SPBC83.07 [details] [associations]
symbol:jmj3 "Lid2 complex subunit, histone demethylase
H3-K36 specific Jmj3" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0016577 "histone demethylation" evidence=ISO] [GO:0048189 "Lid2
complex" evidence=IDA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=ISO] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 PomBase:SPBC83.07 GO:GO:0005829
EMBL:CU329671 GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0000790 GO:GO:0048189 InterPro:IPR003349
PROSITE:PS51183 SMART:SM00545 GO:GO:0051864 PIR:T40696
RefSeq:NP_595639.1 ProteinModelPortal:O94691 STRING:O94691
EnsemblFungi:SPBC83.07.1 GeneID:2540780 KEGG:spo:SPBC83.07
eggNOG:NOG317950 OrthoDB:EOG4WQ4CQ NextBio:20801898 Uniprot:O94691
Length = 752
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 38/151 (25%), Positives = 65/151 (43%)
Query: 382 NVWNEYCNSPW-NLNNLPKLKGSILRMVHHNITGVMVPWLYLGMLFSA-----FCWHFED 435
++W Y N P +P + + VH ++ W +G LF+ W E
Sbjct: 157 SLWYGYTNRPSIPFYFIPSISAAQKDRVHLRSNTLINTWPNVGHLFAGKWKTTLPWRVES 216
Query: 436 HCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLV 495
+++ H G WY +P + + +F+K+ D D L + PS LV
Sbjct: 217 PELHAVQVHLGGSSLQWYVIPSAHSESFKKLAGKLAQDEHWRCSDFLLHQNILFPPSTLV 276
Query: 496 ENGVPVYSVLQEPGNFVITFPRSYHAGFNFG 526
+NG+ YS + + +ITFP ++H+ F G
Sbjct: 277 QNGIVTYSTVLKQDELLITFPGTHHSAFCLG 307
Score = 63 (27.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 31 PVYYPTEDEFKDPLEYICKIRAEAERYGICKIVPPKSWKPPFALD 75
PV P EF D +I ++ ++YG K+V P S P+ D
Sbjct: 35 PVVEPKISEFVDMESFIRRVERLGKKYGAIKVVRPSSVLNPWNED 79
Score = 41 (19.5 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1819 NLWWHNRKPFRRAAKK 1834
+LW H+ KP R ++K
Sbjct: 344 SLWPHSHKPQRACSQK 359
>UNIPROTKB|P58267 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 EMBL:AF362752
IPI:IPI00597142 RefSeq:NP_989971.1 UniGene:Gga.47
ProteinModelPortal:P58267 GeneID:395352 KEGG:gga:395352 CTD:8193
HOVERGEN:HBG004475 NextBio:20815437 InterPro:IPR025750 Pfam:PF14051
Uniprot:P58267
Length = 380
Score = 145 (56.1 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C S + E +L CD C++G+H+YC+SPP+ P G W C CL KD
Sbjct: 321 CSLCGSAENDEQLLFCDDCDRGYHMYCISPPVAEPPEGTWSCHLCLRQLKD 371
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 133 (51.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 241 KEDELDQICEQCKSGLHG-----EVMLLCDRCNKGWHVYCLSPPLKHVPRGN-WYCLECL 294
K+DE + C C L G + L+CD C+ +H+YCL PPL +P+ + WYC EC
Sbjct: 309 KDDE-SKTCRVCACHLCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSIPKEDEWYCPECR 367
Query: 295 N 295
N
Sbjct: 368 N 368
Score = 69 (29.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 32/107 (29%), Positives = 46/107 (42%)
Query: 576 SKVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVG-TEEDPTCIICRQY 634
SKV PY KE +LW + I+KS GP + +++ EE CI C++
Sbjct: 673 SKVEPYSLTAQQSSLIKEDESNTKLWSE-ILKSLKDGPFQ--KFLSKVEEAFQCICCQEL 729
Query: 635 LYLSAVACRCRPAAFVCLEHWEHLC-ECKTRKLHLLYRHTLAELYDL 680
+Y RP VC +H ++C +C R A YDL
Sbjct: 730 VY--------RPITTVC-QH--NVCKDCLDRSFRAQVFSCPACRYDL 765
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 1453 CMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRN-HAEAYICPYCQYFESESVSQF 1509
C+CC+ +C + CKDC +DR+ A+ + CP C+Y S +
Sbjct: 723 CICCQELVYRPITTVCQHNVCKDC----------LDRSFRAQVFSCPACRYDLGRSYAMQ 772
Query: 1510 GGSPLR 1515
PL+
Sbjct: 773 VNQPLQ 778
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 141 (54.7 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 339 EEEDDHMEFCRVCKDG--GE-LLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRC 389
Score = 123 (48.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 269 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 317
Score = 87 (35.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YHL CL P + + E ++CP C
Sbjct: 345 MEFCRVCK-DGGEL--LCCDTCPSSYHLHCLNPPLPEIPNGE-WLCPRC 389
Score = 66 (28.3 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 1713 CRKPYDEKAMIACYQCDEWYHIDCVKLLSAPEI----YICAACKPQ 1754
CR D ++ C C YH+ C+ PEI ++C C PQ
Sbjct: 348 CRVCKDGGELLCCDTCPSSYHLHCLNP-PLPEIPNGEWLCPRCTPQ 392
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1021 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1077
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1078 YRFVTRASVEERITQVAKRKMM 1099
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1203 LDKDDIGDGLSNSLVSKIEQLITSMESAANCGLSLGFDFHEISELQN 1249
L KDD+ G+S++ +I ++A + L D + +ELQN
Sbjct: 1132 LFKDDVEGGVSDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQN 1178
>UNIPROTKB|F1SHC3 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 SMART:SM00398
SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:CU633660
EMBL:CU633656 Ensembl:ENSSSCT00000000204 Uniprot:F1SHC3
Length = 5080
Score = 135 (52.6 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 982 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1040
Score = 93 (37.8 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1056 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1115
Query: 1758 SSTP 1761
+ P
Sbjct: 1116 PAAP 1119
Score = 47 (21.6 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 1762 QNVDGGRTNAEFLEPKTPSPKHT--------NSRKKLRKAEPGL 1797
Q R + +P TP PK +SRKKLRK E G+
Sbjct: 4048 QGTPSNREDTAARKPLTPKPKRVQKASDRLVSSRKKLRK-EDGV 4090
>UNIPROTKB|I3LTW9 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0045944
SMART:SM00398 SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 GO:GO:0033148 InterPro:IPR003616
PROSITE:PS50868 GO:GO:0035097 GeneTree:ENSGT00690000101661
OMA:PPNLGFV EMBL:CU633660 EMBL:CU633656 Ensembl:ENSSSCT00000031953
Uniprot:I3LTW9
Length = 5114
Score = 135 (52.6 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1016 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1074
Score = 93 (37.8 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLS-------APEIYICAACKPQAEE 1757
S++ C IC PY +E +I C C+ W H C L + A E + C +C+P +
Sbjct: 1090 SLVTCPICHAPYVEEDLLIQCRHCERWMHAGCESLFTEDDVEQAADEGFDCVSCQPYVVK 1149
Query: 1758 SSTP 1761
+ P
Sbjct: 1150 PAAP 1153
Score = 47 (21.6 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 1762 QNVDGGRTNAEFLEPKTPSPKHT--------NSRKKLRKAEPGL 1797
Q R + +P TP PK +SRKKLRK E G+
Sbjct: 4082 QGTPSNREDTAARKPLTPKPKRVQKASDRLVSSRKKLRK-EDGV 4124
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 129 (50.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2578 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2636
Query: 1756 EESST 1760
E++ T
Sbjct: 2637 EDAMT 2641
Score = 97 (39.2 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 249 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 296
Score = 67 (28.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1495
C K + L C C YHL+C++P EV + + +C
Sbjct: 254 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 295
Score = 41 (19.5 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQF 1362
K+ K + EE + + ++FPV KH++W+++ ++
Sbjct: 852 KKEKKQEEEETMQQATWVKYTFPV----------KHQVWKQKGEEY 887
Score = 40 (19.1 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 997 RKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK-KAHCREKALK 1042
R+ V++ L C L G S D LP+ E K ++K L+
Sbjct: 1309 REQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLE 1355
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 174 (66.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
E+E+ CE C+S +VMLLCD CN+G+H+ CL PPL +P G+WYC C++SD +
Sbjct: 241 EEEVTN-CEICESPDREDVMLLCDSCNQGYHMDCLDPPLYEIPAGSWYCDNCIDSDDE 297
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 432 HFEDHCFYSMNYHHWGDPKCWYSVP---GSEAGAFEKVMRSSLP 472
H+ + + NYHH + Y P G F++ R LP
Sbjct: 1275 HYGQNYHQNQNYHHQHNQHQNYFPPNQHGQHQQYFQRPKRRELP 1318
Score = 42 (19.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 295 NSDKDSFGFVPGKRYTVESFRRVADRAKKKRFR 327
N+ KD KR E+F++V R K + +R
Sbjct: 1119 NNKKDK-SKSRSKRNKGETFKKVGKRQKDRNYR 1150
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 315 RRVADRAKKKRFRSGSAS 332
++ +D+ KK+R R+GS+S
Sbjct: 1487 KKKSDK-KKRRKRTGSSS 1503
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1758 SSTPQNVDG-GR---TNAEFLEPKTPSPKHTNSR 1787
+S P + G GR TN + +P+P N R
Sbjct: 1393 TSPPPHKHGRGRQTSTNRRYARSPSPAPSPRNER 1426
Score = 37 (18.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 457 GSEAGAFEKVMRSSLPDLF-DAQPDLLFQLVTMLNPSVLVENGVPVYSV 504
G A +F ++ + F D++PD + Q+ + S V+ V + S+
Sbjct: 478 GGTASSFSLFGNANDLEYFSDSEPDAVSQISSAGLGSTAVQTSVRIGSI 526
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 129 (50.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2860 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2918
Query: 1756 EESST 1760
E++ T
Sbjct: 2919 EDAMT 2923
Score = 97 (39.2 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 388 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 435
Score = 67 (28.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1495
C K + L C C YHL+C++P EV + + +C
Sbjct: 393 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
Score = 41 (19.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQF 1362
K+ K + EE + + ++FPV KH++W+++ ++
Sbjct: 991 KKEKKQEEEETMQQATWVKYTFPV----------KHQVWKQKGEEY 1026
Score = 40 (19.1 bits), Expect = 7.0e-06, Sum P(3) = 7.0e-06
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 997 RKDQHNVIDELNCILKEGASLRIQVDDLPLVEVELK-KAHCREKALK 1042
R+ V++ L C L G S D LP+ E K ++K L+
Sbjct: 1448 REQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLE 1494
>UNIPROTKB|Q96T88 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0008327 "methyl-CpG
binding" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0016574 "histone ubiquitination" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000791 "euchromatin" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0005657 "replication fork" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0044729 "hemi-methylated DNA-binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000987 "core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000373
"positive regulation of DNA topoisomerase (ATP-hydrolyzing)
activity" evidence=IC] [GO:0032270 "positive regulation of cellular
protein metabolic process" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IC] [GO:0031493 "nucleosomal histone binding"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0008283 "cell
proliferation" evidence=IEP] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0006281 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 GO:GO:0042802
EMBL:CH471139 GO:GO:0000987 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0032270
GO:GO:0004842 GO:GO:0016363 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0010390 GO:GO:0031493
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
GO:GO:0008327 PDB:3T6R PDBsum:3T6R PDB:3DB3 PDBsum:3DB3 PDB:3ASK
PDB:3ASL PDB:4GY5 PDBsum:3ASK PDBsum:3ASL PDBsum:4GY5
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:AC027319
GO:GO:2000373 CTD:29128 HOGENOM:HOG000124662 HOVERGEN:HBG059298
GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148 EMBL:AF129507
EMBL:AB177623 EMBL:AB177624 EMBL:AB075601 EMBL:AF274048
EMBL:EF560733 EMBL:AK025578 EMBL:AK289389 EMBL:AK314579
EMBL:AY787925 EMBL:AC053467 EMBL:BC113875 IPI:IPI00797945
RefSeq:NP_001041666.1 RefSeq:NP_037414.3 UniGene:Hs.108106 PDB:2FAZ
PDB:2L3R PDB:2LGG PDB:2LGK PDB:2LGL PDB:2PB7 PDB:3BI7 PDB:3CLZ
PDB:3DB4 PDB:3DWH PDB:3FL2 PDB:3SHB PDB:3SOU PDB:3SOW PDB:3SOX
PDB:3ZVY PDB:3ZVZ PDBsum:2FAZ PDBsum:2L3R PDBsum:2LGG PDBsum:2LGK
PDBsum:2LGL PDBsum:2PB7 PDBsum:3BI7 PDBsum:3CLZ PDBsum:3DB4
PDBsum:3DWH PDBsum:3FL2 PDBsum:3SHB PDBsum:3SOU PDBsum:3SOW
PDBsum:3SOX PDBsum:3ZVY PDBsum:3ZVZ ProteinModelPortal:Q96T88
SMR:Q96T88 IntAct:Q96T88 MINT:MINT-2815626 STRING:Q96T88
PhosphoSite:Q96T88 DMDM:67462077 PaxDb:Q96T88 PRIDE:Q96T88
DNASU:29128 Ensembl:ENST00000262952 Ensembl:ENST00000398240
Ensembl:ENST00000455180 GeneID:29128 KEGG:hsa:29128 UCSC:uc002mbo.3
GeneCards:GC19P004910 HGNC:HGNC:12556 HPA:HPA049408 MIM:607990
neXtProt:NX_Q96T88 PharmGKB:PA37196 InParanoid:Q96T88
OrthoDB:EOG408N7M EvolutionaryTrace:Q96T88 GenomeRNAi:29128
NextBio:52244 ArrayExpress:Q96T88 CleanEx:HS_UHRF1
Genevestigator:Q96T88 GermOnline:ENSG00000034063 Uniprot:Q96T88
Length = 793
Score = 138 (53.6 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 242 EDELDQICEQCKSGLHG-----EVMLLCDRCNKGWHVYCLSPPLKHVP-RGNWYCLECLN 295
+D+++++C C L G + L+CD C+ +H+YCL PPL VP WYC EC N
Sbjct: 306 KDDVNRLCRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 365
Score = 62 (26.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 1453 CMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRN-HAEAYICPYCQYFESESVSQF 1509
C+CC+ +C + CKDC +DR+ A+ + CP C+Y S +
Sbjct: 724 CICCQELVFRPITTVCQHNVCKDC----------LDRSFRAQVFSCPACRYDLGRSYAMQ 773
Query: 1510 GGSPLR 1515
PL+
Sbjct: 774 VNQPLQ 779
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 120 (47.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS--DKDSFGFVPGKRYTVESF--RR 316
+L+CD C++ +H+ CL PPLK +P+G W C C + K+ PG V S+ +
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYK 60
Query: 317 VADRAKKKRFRSGSAS----RVQMEKK 339
A +K++ S+ R Q+E+K
Sbjct: 61 AAKEEEKQKLLKWSSDLKQEREQLEQK 87
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 146 (56.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
++E K + D+ D+ C++C H E++LLCD C+ G+H CL PPL +P G W
Sbjct: 676 EEEEEKESEEAILADD-DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEW 734
Query: 289 YCLEC 293
+C C
Sbjct: 735 FCPPC 739
>MGI|MGI:2682319 [details] [associations]
symbol:Mll2 "myeloid/lymphoid or mixed-lineage leukemia 2"
species:10090 "Mus musculus" [GO:0001555 "oocyte growth"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=ISO] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 MGI:MGI:2682319
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0001701 GO:GO:0006351 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006342 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0051568 GO:GO:0001555 GeneTree:ENSGT00690000101661
ChiTaRS:MLL2 EMBL:AC161165 EMBL:BC058659 IPI:IPI00381244
UniGene:Mm.264889 ProteinModelPortal:Q6PDK2 SMR:Q6PDK2
IntAct:Q6PDK2 STRING:Q6PDK2 PhosphoSite:Q6PDK2 PaxDb:Q6PDK2
PRIDE:Q6PDK2 Ensembl:ENSMUST00000023741 HOGENOM:HOG000168503
InParanoid:Q6PDK2 OrthoDB:EOG4T4CTJ NextBio:401486 Bgee:Q6PDK2
Genevestigator:Q6PDK2 Uniprot:Q6PDK2
Length = 5588
Score = 135 (52.6 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 1385 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 1443
Score = 131 (51.2 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++C+ C+ + ML+C+ C+KG+H +CL PP++ +P +W C C
Sbjct: 274 KVCQSCRKPGNDSKMLVCETCDKGYHTFCLKPPMEDLPAHSWKCKTC 320
Score = 91 (37.1 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEE 1757
S++ C +C PY +E +I C C+ W H C L + E+ + C +C+P +
Sbjct: 1459 SLVTCPVCHAPYVEEDLLIQCRHCERWMHAGCESLFTEDEVEQAADEGFDCVSCQPYVVK 1518
Query: 1758 SSTP 1761
P
Sbjct: 1519 PVVP 1522
Score = 66 (28.3 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + E L CS C CYH C+
Sbjct: 1335 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCV 1365
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1448 VSMTLCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
V +C C S L+C C YH CL P
Sbjct: 1381 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDP 1415
Score = 38 (18.4 bits), Expect = 8.1e-06, Sum P(4) = 8.1e-06
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 1777 KTPSPKHTNSRKKLRKAEPGL 1797
KT S + +SRKKLRK E G+
Sbjct: 4578 KT-SDRLPSSRKKLRK-EDGV 4596
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 1774 LEPKTPSPKHTNSRK 1788
L P TPS NSR+
Sbjct: 2734 LPPATPSSMDMNSRQ 2748
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 129 (50.5 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2530 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2588
Query: 1756 EESST 1760
E++ T
Sbjct: 2589 EDAMT 2593
Score = 97 (39.2 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 188 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 235
Score = 67 (28.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1495
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
Score = 41 (19.5 bits), Expect = 6.8e-05, Sum P(4) = 6.8e-05
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQF 1362
K+ K + EE + + ++FPV KH++W+++ ++
Sbjct: 666 KKEKKQEEEETMQQATWVKYTFPV----------KHQVWKQKGEEY 701
Score = 37 (18.1 bits), Expect = 9.8e-06, Sum P(3) = 9.8e-06
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 847 SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDV- 905
S+ +SE ++ G + E+ S S+ K D +R C S + + I+
Sbjct: 898 SSLKSLSESSVITKAKEGCQSDSLRQEQ-SPNTSNGKT-EDVIRGC-SQSDSSILRINDP 954
Query: 906 ------LYKLESEALDLKIDVPETD 924
LY E D+ I PET+
Sbjct: 955 DHTTNRLYPKEQMLDDISIQSPETN 979
Score = 37 (18.1 bits), Expect = 6.8e-05, Sum P(4) = 6.8e-05
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1133 KNSELFLASAFAVAPASCSLLRLESLKDLV--SQSKFLKISLKEQTELEKVINN 1184
K S+L A A + L + E + LV SQ + ++S K++ ++ INN
Sbjct: 461 KLSQLKSQQVAAAAHEANKLFK-EGKEVLVVNSQGEISRLSTKKEVVMKGNINN 513
>UNIPROTKB|F1N6I8 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IEA] [GO:0051567 "histone H3-K9 methylation"
evidence=IEA] [GO:0034770 "histone H4-K20 methylation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00384
SMART:SM00391 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL GO:GO:0070869
GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10 EMBL:DAAA02013527
IPI:IPI01000629 UniGene:Bt.64668 Ensembl:ENSBTAT00000038215
NextBio:20869136 Uniprot:F1N6I8
Length = 2013
Score = 149 (57.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
E ++++ C C+ G + E +LLCD C++G H+YCL P ++ VP G+W+C CL
Sbjct: 1780 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCLRPKMEAVPEGDWFCAVCL 1833
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 234 KVCHKVDK-EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLE 292
+V H K EDE C C+ G GE ++ CD C + +H+ CLSPPL+ +P G W C
Sbjct: 80 RVLHPSPKNEDE----CAVCRDG--GE-LICCDGCPRAFHLACLSPPLREIPSGTWRCSS 132
Query: 293 CLNS 296
CL +
Sbjct: 133 CLQA 136
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 129 (50.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2656 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2714
Query: 1756 EESST 1760
E++ T
Sbjct: 2715 EDAMT 2719
Score = 97 (39.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 188 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 235
Score = 67 (28.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1495
C K + L C C YHL+C++P EV + + +C
Sbjct: 193 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 234
Score = 41 (19.5 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQF 1362
K+ K + EE + + ++FPV KH++W+++ ++
Sbjct: 792 KKEKKQEEEETMQQATWVKYTFPV----------KHQVWKQKGEEY 827
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 847 SACSKISELELLYSRASGLPICIVESEKLSQRISSAKVWRDSVRKCISNKCPAAIEIDV- 905
S+ +SE ++ G + E+ S S+ K D +R C S + + I+
Sbjct: 1024 SSLKSLSESSVITKAKEGCQSDSLRQEQ-SPNTSNGKT-EDVIRGC-SQSDSSILRINDP 1080
Query: 906 ------LYKLESEALDLKIDVPETD 924
LY E D+ I PET+
Sbjct: 1081 DHTTNRLYPKEQMLDDISIQSPETN 1105
Score = 37 (18.1 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1133 KNSELFLASAFAVAPASCSLLRLESLKDLV--SQSKFLKISLKEQTELEKVINN 1184
K S+L A A + L + E + LV SQ + ++S K++ ++ INN
Sbjct: 587 KLSQLKSQQVAAAAHEANKLFK-EGKEVLVVNSQGEISRLSTKKEVVMKGNINN 639
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 118 (46.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 260 VMLLCDRCNKGWHVYCLSPPLKHVPRGN-WYCLEC 293
+ +LCD CN +H+YCL+PPL VP WYC C
Sbjct: 1 MQVLCDECNMAYHIYCLNPPLDKVPEEEYWYCPSC 35
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL PPL+ VP+G W C C+
Sbjct: 165 VCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 211
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 142 (55.0 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 239 VDKEDELD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
V++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C CL+
Sbjct: 449 VEEEDDHHMEFCRVCKDG--GE-LLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRCLS 503
Score = 122 (48.0 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 371 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC 419
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YHL CL P D + E +ICP C
Sbjct: 457 MEFCRVCK-DGGEL--LCCDTCPSSYHLHCLNPPLPDIPNGE-WICPRC 501
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(5) = 0.00013
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1125 PGAPQFVFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1181
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V K+ ++ +++ K++++
Sbjct: 1182 YRFVTKASVEERITQVAKKKMM 1203
Score = 52 (23.4 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 16/78 (20%), Positives = 36/78 (46%)
Query: 1754 QAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLA-IANNSSVFD 1812
+A+ S + D +T E E K + ++ +K+L+ + G+ + A + N + +
Sbjct: 1660 KADGSDATNSGDSTKTKEESSEEKMDTSPASDEKKELKDEKDGVKPEDSAKLQNGENAKE 1719
Query: 1813 CSSGIDNLWWHNRKPFRR 1830
S G D + +K ++
Sbjct: 1720 TSGGGDGVSEEKKKAVKQ 1737
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1675 GALSLDKVFELIAEGENLPVYLEKELKS 1702
G+ D++ E+ EGE P +KE K+
Sbjct: 1595 GSRQEDEIIEIPDEGEKSPSSAKKEEKT 1622
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1749 AACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAE 1794
AA E+ TP G T A+ +P TP+P+ + + +++ E
Sbjct: 1542 AAAIAAGEDPKTPST--G--TPAD-TQPNTPAPEDLSKTEDIKELE 1582
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(5) = 1.4e-05
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 1636 KEGLLMNISPKDHYRQKLMELNRIGSQWA 1664
++ +L I R+K+ E + QW+
Sbjct: 1501 RQHVLTRIGVMSLIRKKVQEFEHVNGQWS 1529
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 1757 ESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAE 1794
E + V G R E +E K +S KK K +
Sbjct: 1586 EGDGEKEVKGSRQEDEIIEIPDEGEKSPSSAKKEEKTD 1623
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 890 RKCISNKCPA-AIEIDVLYKLESEALDLKIDV 920
++ +S PA A+ VL +LE D+K DV
Sbjct: 1880 KESMSGNKPANAVLHKVLKQLEELLSDMKADV 1911
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 170 (64.9 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 44/134 (32%), Positives = 63/134 (47%)
Query: 412 ITGVMVPWLYLGMLFSAFCWHFEDHCFYSMNYHHWGDPKCWYSVPGSEAGAFEKVMRSSL 471
I G+ P Y G F+ F WH ED ++NY H+G K W+ + G F+K +
Sbjct: 656 IPGLHTPTCYRGTPFAPFAWHHEDFELGAINYLHYGQ-KIWFV---THPGFFDKATATFQ 711
Query: 472 PDLFDAQPDLLFQLVTMLNPSV--LVENGVPVYSVLQEPGNFVITFPRSYHAGFNFGLNC 529
L Q F ++ V L +P +QE G V+ +PR+YH+GF
Sbjct: 712 EALNIDQDHSQFLRHEAVHGGVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGFGATATV 771
Query: 530 AEAVNFAPADW-LP 542
AEAVN+A + LP
Sbjct: 772 AEAVNYADLQYTLP 785
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 10/49 (20%), Positives = 26/49 (53%)
Query: 292 ECLNSDKDSFGFVPGKRYTVESFRRVAD-RAKKKRFRSGSASRVQMEKK 339
E + S+K+ ++ K T+ES +++ A+ K+ + ++ + K+
Sbjct: 13 ESIRSNKEVIAWLSEKLETLESEKKIERLEAEIKKLKGSRSNEENLRKQ 61
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 314 FRRVADRAKKKRFRSGSASR 333
+R+V ++AKK+ F + S+
Sbjct: 137 YRQVLEKAKKQDFHPSAPSK 156
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 1115 LPSLDEVQNEISTAKSWLKN 1134
LP L+++ NE+ A+ K+
Sbjct: 884 LPPLEDMANEVINAEERAKS 903
>ZFIN|ZDB-GENE-030131-5132 [details] [associations]
symbol:dpf2l "D4, zinc and double PHD fingers
family 2, like" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 ZFIN:ZDB-GENE-030131-5132 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 EMBL:BX005228
EMBL:BC092130 IPI:IPI00490729 RefSeq:NP_997861.2 UniGene:Dr.75185
STRING:Q58E00 Ensembl:ENSDART00000054243 GeneID:326933
KEGG:dre:326933 CTD:326933 InParanoid:Q58E00 OMA:ERSILMP
OrthoDB:EOG40CHH8 NextBio:20809799 Uniprot:Q58E00
Length = 405
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL KD
Sbjct: 342 CNVCGTSENDDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLCLALLKD 392
>UNIPROTKB|F5H322 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AC005844 EMBL:AC007406 HGNC:HGNC:9886
ChiTaRS:KDM5A IPI:IPI01011106 ProteinModelPortal:F5H322 SMR:F5H322
Ensembl:ENST00000536014 ArrayExpress:F5H322 Bgee:F5H322
Uniprot:F5H322
Length = 123
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 66 KSWKPPFALDLGSFTFPTKTQAIHQLQARSAACDSKTFELEYSRFLKEHVGTKLNKKVFF 125
+ W+PPFA ++ SF F + Q +++L+A + F + ++F E G+ L V
Sbjct: 36 EDWQPPFACEVKSFRFTPRVQRLNELEAMTRV--RLDFLDQLAKFW-ELQGSTLKIPVV- 91
Query: 126 EGEELDLCKLFNAAKRFGGYDKVVKEKKWGEV 157
E + LDL L GG++ V KEKKW +V
Sbjct: 92 ERKILDLYALSKIVASKGGFEMVTKEKKWSKV 123
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 145 (56.1 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 229 DQERVKVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW 288
D+E C ++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W
Sbjct: 264 DEEEEGGCE--EEEDDHMEFCRVCKDG--GE-LLCCDACPSSYHLHCLNPPLPEIPNGEW 318
Query: 289 YCLEC 293
C C
Sbjct: 319 LCPRC 323
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P L+ P G W C C
Sbjct: 202 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 250
Score = 91 (37.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YHL CL P + + E ++CP C
Sbjct: 279 MEFCRVCK-DGGEL--LCCDACPSSYHLHCLNPPLPEIPNGE-WLCPRC 323
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 952 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1008
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1009 YRFVTRASVEERITQVAKRKMM 1030
Score = 44 (20.5 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV +L I + R + SE
Sbjct: 1708 NKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPV-AARLQMSE 1754
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 1743 PEIYICAACKPQAEESSTPQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKML 1802
PEI + E ++ DG + E E PSP+ + L + E L + L
Sbjct: 1453 PEIQALPTALDRVEGEDKHESSDG-KERLEETEKAPPSPEQLPKEEMLPEKEKILDKLEL 1511
Query: 1803 AIANN 1807
++ ++
Sbjct: 1512 SLIHS 1516
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1379 KELGEAAAFDCPELEKVLSKVDKVE 1403
KELG PE++ + + +D+VE
Sbjct: 1442 KELGVQKPKKPPEIQALPTALDRVE 1466
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 24/128 (18%), Positives = 54/128 (42%)
Query: 736 VLQGLFSSDAY-GTLLREAEQFLWAGFEMDAVRDMVNKLIEGRRWAEGIRDCLHKAENWS 794
+L F S+ + G L +FL F++ ++ + + + +D H A
Sbjct: 1625 ILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPA---M 1681
Query: 795 SLPGSDSEKVRLDCVNELLGFDPLPCNEPGHLILQNYAEEARSLIQEINAALSAC-SKIS 853
+L +E L ++ L + L N+P + +L + L+ ++ A ++ S +S
Sbjct: 1682 ALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLS 1741
Query: 854 ELELLYSR 861
+ + +R
Sbjct: 1742 RIPPVAAR 1749
>UNIPROTKB|F1MWC1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000009493 ArrayExpress:F1MWC1 Uniprot:F1MWC1
Length = 387
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL K+
Sbjct: 328 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKE 378
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL K+
Sbjct: 328 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKE 378
>UNIPROTKB|F1MED1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000054713 ArrayExpress:F1MED1 Uniprot:F1MED1
Length = 388
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL K+
Sbjct: 329 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKE 379
>UNIPROTKB|J3KQY6 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 ProteinModelPortal:J3KQY6
Ensembl:ENST00000456296 Uniprot:J3KQY6
Length = 388
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL K+
Sbjct: 329 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKE 379
>UNIPROTKB|H0YEI1 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 Ensembl:ENST00000531989
Bgee:H0YEI1 Uniprot:H0YEI1
Length = 116
Score = 116 (45.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 261 MLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
+L CD C++G+H+YCL+P + P G+W C CL+ K+
Sbjct: 67 LLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKE 105
>UNIPROTKB|I3L6G5 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:FP565378
Ensembl:ENSSSCT00000025066 Uniprot:I3L6G5
Length = 417
Score = 138 (53.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL K+
Sbjct: 358 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRHLKE 408
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 125 (49.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2766 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2824
Query: 1756 EESST 1760
E++ T
Sbjct: 2825 EDAMT 2829
Score = 97 (39.2 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 366 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 413
Score = 39 (18.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 979 DAIFWIARLNDILVNINGRKDQH-NVIDEL 1007
D +W A L +L +I QH +V ++L
Sbjct: 486 DKDYWEAELCRVLEDIREEMQQHMDVTEDL 515
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 127 (49.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLN 295
C C + L+CD C+ +H+YCL+PPL +P +WYC EC N
Sbjct: 274 CHICGGKQDPDKQLMCDECDMAFHIYCLNPPLSSIPDDEDWYCPECRN 321
Score = 67 (28.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 1452 LCMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNH-AEAYICPYCQY 1500
LC+CC+ +C + CKDC +DR+ A+ Y CP C+Y
Sbjct: 663 LCICCQEVVFRPVTTVCQHNVCKDC----------LDRSFKADVYSCPACRY 704
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 125 (49.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C W+H CV +L S E+ Y+C C+
Sbjct: 2827 KEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAELIDEYVCPQCQ-ST 2885
Query: 1756 EESST 1760
E++ T
Sbjct: 2886 EDAMT 2890
Score = 97 (39.2 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 366 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 413
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 979 DAIFWIARLNDILVNINGRKDQH-NVIDEL 1007
D +W A L +L +I QH +V ++L
Sbjct: 486 DKDYWEAELCRVLEDIREEMQQHMDVTEDL 515
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 140 (54.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 406 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 456
Score = 127 (49.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 313 KKKVLGCPTVTGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 369
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 370 APEGKWSCPHC 380
Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 412 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 456
Score = 65 (27.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1081 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1137
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1138 YRFVTRASVEERITQVAKRKMM 1159
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1777 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1823
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1495 PTTPEASTTNSPCTSKPATPAPSEK 1519
>UNIPROTKB|J9P5P6 [details] [associations]
symbol:MLL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03010288 EMBL:AAEX03010289 Ensembl:ENSCAFT00000046455
Uniprot:J9P5P6
Length = 4265
Score = 133 (51.9 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL+PPL+ VP+G W C C+
Sbjct: 378 VCEACGKASDPGRLLLCDDCDISYHTYCLAPPLQTVPKGGWKCKWCV 424
Score = 85 (35.0 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1707 SMLYC-ICRKPYDEKAMIA-CYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEE 1757
S+ C +C + Y E +I C QCD W H C L + E+ + C+ C+P
Sbjct: 452 SLSSCPVCCRNYREDDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMPT 511
Query: 1758 SSTPQN 1763
S+ P +
Sbjct: 512 SNVPSS 517
Score = 47 (21.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 1761 PQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIANNSSVFDCSSGIDNL 1820
P ++ F++P+ P P T SR +++ GL Q + VF S
Sbjct: 1202 PSTPTSASSDDVFVKPQAPPPAATPSRVSIQE---GLPQSQACQPASPQVFSPGSS---- 1254
Query: 1821 WWHNRKP 1827
H+R P
Sbjct: 1255 --HSRPP 1259
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L Q+M A + ++F L+W R RR
Sbjct: 3916 LPQQMQAFHSPKALFPVGYEASRLYWSTRYANRR 3949
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 140 (54.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 501 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 551
Score = 127 (49.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 408 KKKVLGCPTVTGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 464
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 465 APEGKWSCPHC 475
Score = 90 (36.7 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 507 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 551
Score = 65 (27.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1176 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1232
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1233 YRFVTRASVEERITQVAKRKMM 1254
Score = 40 (19.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1872 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1918
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1590 PTTPEASTTNSPCTSKPATPAPSEK 1614
>MGI|MGI:2151152 [details] [associations]
symbol:Baz2a "bromodomain adjacent to zinc finger domain,
2A" species:10090 "Mus musculus" [GO:0000183 "chromatin silencing
at rDNA" evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006306 "DNA methylation"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=IDA] [GO:0033553 "rDNA
heterochromatin" evidence=IDA] [GO:0034770 "histone H4-K20
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051567 "histone H3-K9 methylation" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IDA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IMP;IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
MGI:MGI:2151152 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF54171
GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006306
GO:GO:0051567 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 HOGENOM:HOG000169644
HOVERGEN:HBG107494 OrthoDB:EOG44QT05 ChiTaRS:BAZ2A GO:GO:0033553
GO:GO:0070869 GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10
EMBL:AK155523 EMBL:AJ309544 EMBL:AK122243 IPI:IPI00130157
IPI:IPI00944144 IPI:IPI00944160 UniGene:Mm.252213
ProteinModelPortal:Q91YE5 SMR:Q91YE5 STRING:Q91YE5
PhosphoSite:Q91YE5 PaxDb:Q91YE5 PRIDE:Q91YE5 UCSC:uc007hlj.1
InParanoid:Q80U42 CleanEx:MM_BAZ2A Genevestigator:Q91YE5
GermOnline:ENSMUSG00000040054 Uniprot:Q91YE5
Length = 1889
Score = 145 (56.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSD-KD 299
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL+ ++
Sbjct: 1657 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEE 1716
Query: 300 SFGFVPG 306
+ PG
Sbjct: 1717 EYTQRPG 1723
>UNIPROTKB|F1P989 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AAEX03006927
EMBL:AAEX03006928 Ensembl:ENSCAFT00000000220 Uniprot:F1P989
Length = 1911
Score = 145 (56.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1678 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLAQQVEG 1737
Query: 301 FGFV--PG 306
GF PG
Sbjct: 1738 -GFAQKPG 1744
>UNIPROTKB|J9NSC0 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL Gene3D:3.30.890.10
EMBL:AAEX03006927 EMBL:AAEX03006928 Ensembl:ENSCAFT00000049267
Uniprot:J9NSC0
Length = 1921
Score = 145 (56.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1688 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLAQQVEG 1747
Query: 301 FGFV--PG 306
GF PG
Sbjct: 1748 -GFAQKPG 1754
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 140 (54.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 501 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 551
Score = 127 (49.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 408 KKKVLGCPTVTGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 464
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 465 APEGKWSCPHC 475
Score = 90 (36.7 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 507 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 551
Score = 65 (27.9 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1176 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1232
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1233 YRFVTRASVEERITQVAKRKMM 1254
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1906 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1952
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1590 PTTPEASTTNSPCTSKPATPAPSEK 1614
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 138 (53.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFVP 305
D++C CK G + + C C + +H+ CL PPLK P+G W C +C G VP
Sbjct: 322 DELCAACKRGTN---LQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKCQQKALKKDGGVP 378
Query: 306 --GKRYTVESF---RRVADRAKKKRFRSGS---ASRVQMEKK 339
G V S+ + V + K+K + GS + R Q+E++
Sbjct: 379 WTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQSERQQLEER 420
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 140 (54.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 450 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 126 (49.4 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 356 KKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 412
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 413 APEGKWSCPHC 423
Score = 90 (36.7 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 456 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 500
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1125 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1181
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1182 YRFVTRASVEERITQVAKRKMM 1203
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1854 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1900
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1539 PTTPEASATNSPCTSKPATPAPSEK 1563
>UNIPROTKB|J3QQQ8 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
Ensembl:ENST00000581258 Uniprot:J3QQQ8
Length = 420
Score = 136 (52.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1688 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1743
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 229 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 288
Query: 1744 EI---YICAACKPQAEESST 1760
E+ Y+C C+ E++ T
Sbjct: 289 ELIDEYVCPQCQ-STEDAMT 307
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1755
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 186 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 244
Query: 1756 EESSTPQ 1762
+E S+ +
Sbjct: 245 QEGSSEE 251
Score = 49 (22.3 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 13/69 (18%), Positives = 31/69 (44%)
Query: 318 ADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPE 377
+ ++KKK+ S ++ + + K + I + + G DL T+ Y + + +
Sbjct: 172 SSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAK 231
Query: 378 SVDANVWNE 386
+D + N+
Sbjct: 232 KMDVYICND 240
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 140 (54.3 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 509 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 559
Score = 126 (49.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+++V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 415 KKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 471
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 472 APEGKWSCPHC 482
Score = 90 (36.7 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 515 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 559
Score = 65 (27.9 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1184 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1240
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1241 YRFVTRASVEERITQVAKRKMM 1262
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1913 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1959
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1598 PTTPEASATNSPCTSKPATPAPSEK 1622
>UNIPROTKB|F1P7W6 [details] [associations]
symbol:MLL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001594
InterPro:IPR001965 InterPro:IPR002219 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00109
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0035556 GO:GO:0046872
GO:GO:0008270 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AAEX03010288 EMBL:AAEX03010289
Ensembl:ENSCAFT00000007959 Uniprot:F1P7W6
Length = 4837
Score = 133 (51.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL+PPL+ VP+G W C C+
Sbjct: 937 VCEACGKASDPGRLLLCDDCDISYHTYCLAPPLQTVPKGGWKCKWCV 983
Score = 104 (41.7 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 1453 CMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPYCQYFESE 1504
C C + + L C+ CK HL+C +PT E+D E YIC YC++ +E
Sbjct: 402 CGKCYHPELQKDMLHCNMCKRWVHLECDKPTDHELDSQFKEEYICMYCKHIAAE 455
Score = 85 (35.0 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 1707 SMLYC-ICRKPYDEKAMIA-CYQCDEWYHIDCVKLLSAPEI-------YICAACKPQAEE 1757
S+ C +C + Y E +I C QCD W H C L + E+ + C+ C+P
Sbjct: 1011 SLSSCPVCCRNYREDDLILQCRQCDRWMHAVCQNLNTEEEVENVADIGFDCSMCRPYMPT 1070
Query: 1758 SSTPQN 1763
S+ P +
Sbjct: 1071 SNVPSS 1076
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 246 DQICEQCKSGLHGEVM--LLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D C C S G+++ C C + +H CL + + R W C EC
Sbjct: 273 DANCAVCDSP--GDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPEC 320
Score = 47 (21.6 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 1761 PQNVDGGRTNAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKMLAIANNSSVFDCSSGIDNL 1820
P ++ F++P+ P P T SR +++ GL Q + VF S
Sbjct: 1764 PSTPTSASSDDVFVKPQAPPPAATPSRVSIQE---GLPQSQACQPASPQVFSPGSS---- 1816
Query: 1821 WWHNRKP 1827
H+R P
Sbjct: 1817 --HSRPP 1821
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 140 (54.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
++ED+ + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 448 EEEDDHMEYCRVCKDG--GE-LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 498
Score = 125 (49.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 230 QERVKVCHKVDKEDELD-------QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+ +V C V E+E+D CE C+ G GE+ +LCD C + +H+ CL P L
Sbjct: 355 KRKVLGCPTVAGEEEVDGYETDHQDYCEVCQQG--GEI-ILCDTCPRAYHLVCLDPELDR 411
Query: 283 VPRGNWYCLEC 293
P G W C C
Sbjct: 412 APEGKWSCPHC 422
Score = 90 (36.7 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C AC YH+ CL P D + E ++CP C
Sbjct: 454 MEYCRVCK-DGGEL--LCCDACISSYHIHCLNPPLPDIPNGE-WLCPRC 498
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ + +
Sbjct: 1123 PGAQQFCFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDIQA--FSRAHRIGQANKVMI 1179
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ KR+++
Sbjct: 1180 YRFVTRASVEERITQVAKRKMM 1201
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 895 NKCPAAIEIDVLYKLESEALDLKIDVPETDMLLKMIGQAESCRARCSE 942
NK A+ VL +LE D+K DV L I + R + SE
Sbjct: 1852 NKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPI-AARLQMSE 1898
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1776 PKTPSPKHTNSRKKLRKAEPGLAQK 1800
P TP TNS + A P ++K
Sbjct: 1537 PTTPEASATNSPCTSKPATPAPSEK 1561
>UNIPROTKB|I3L9M6 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU468457
Ensembl:ENSSSCT00000032195 Uniprot:I3L9M6
Length = 1750
Score = 143 (55.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL+
Sbjct: 1517 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLS 1571
>UNIPROTKB|P58268 [details] [associations]
symbol:REQ "Zinc finger protein ubi-d4" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 EMBL:AF362751 IPI:IPI00591152
RefSeq:NP_989662.1 UniGene:Gga.48 ProteinModelPortal:P58268
GeneID:374236 KEGG:gga:374236 CTD:5977 InParanoid:P58268 KO:K13196
OrthoDB:EOG41JZD4 NextBio:20813734 Uniprot:P58268
Length = 405
Score = 135 (52.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKD 299
C C + + + +L CD C++G+H+YCL+PP+ P G+W C CL+ K+
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKE 394
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 138 (53.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
C++C H E++LLCD C+ G+H CL PPL +P G W+C C
Sbjct: 3 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 47
Score = 38 (18.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1812 DCSSGIDNLWWHNRKPFRRAA---KKRTVLDSL 1841
D S+ +D N++P R AA KKR L+ L
Sbjct: 171 DISTILDEERKENKRPQRAAAARRKKRRRLNDL 203
>UNIPROTKB|J3QK86 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:CH471054 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AC090681
UniGene:Hs.314263 HGNC:HGNC:962 ChiTaRS:BAZ2A Gene3D:3.30.890.10
ProteinModelPortal:J3QK86 Ensembl:ENST00000179765 PhylomeDB:J3QK86
Uniprot:J3QK86
Length = 1873
Score = 143 (55.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1639 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEG 1698
Query: 301 -FGFVPG 306
F PG
Sbjct: 1699 EFTQKPG 1705
>UNIPROTKB|J3KPG5 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AC090681
HGNC:HGNC:962 ChiTaRS:BAZ2A Gene3D:3.30.890.10
Ensembl:ENST00000379441 Uniprot:J3KPG5
Length = 1875
Score = 143 (55.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1641 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEG 1700
Query: 301 -FGFVPG 306
F PG
Sbjct: 1701 EFTQKPG 1707
>UNIPROTKB|F8VU39 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0034770 "histone H4-K20 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0070869
"heterochromatin assembly involved in chromatin silencing"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
SUPFAM:SSF54171 GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC090681 IPI:IPI00759742 HGNC:HGNC:962 ChiTaRS:BAZ2A
GO:GO:0070869 GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10
PRIDE:F8VU39 Ensembl:ENST00000549884 ArrayExpress:F8VU39
Bgee:F8VU39 Uniprot:F8VU39
Length = 1903
Score = 143 (55.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1669 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEG 1728
Query: 301 -FGFVPG 306
F PG
Sbjct: 1729 EFTQKPG 1735
>UNIPROTKB|Q9UIF9 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0034770 "histone H4-K20 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0070869
"heterochromatin assembly involved in chromatin silencing"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0070577
"histone acetyl-lysine binding" evidence=ISS] [GO:0005677
"chromatin silencing complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006306 "DNA methylation" evidence=ISS]
[GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=NAS] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003723 GO:GO:0006338 SUPFAM:SSF54171
GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006306
GO:GO:0051567 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AB032254
EMBL:CR749379 EMBL:AC090681 EMBL:AB002312 EMBL:AK023830
EMBL:AF000422 EMBL:BC008965 IPI:IPI00296388 IPI:IPI00759742
IPI:IPI00943770 RefSeq:NP_038477.2 UniGene:Hs.314263
ProteinModelPortal:Q9UIF9 SMR:Q9UIF9 IntAct:Q9UIF9
MINT:MINT-7240976 STRING:Q9UIF9 PhosphoSite:Q9UIF9 DMDM:257051081
PaxDb:Q9UIF9 PRIDE:Q9UIF9 DNASU:11176 Ensembl:ENST00000549787
Ensembl:ENST00000551812 GeneID:11176 KEGG:hsa:11176 UCSC:uc001slp.1
UCSC:uc009zow.1 CTD:11176 GeneCards:GC12M056954 H-InvDB:HIX0010736
HGNC:HGNC:962 HPA:HPA005782 MIM:605682 neXtProt:NX_Q9UIF9
PharmGKB:PA25272 HOGENOM:HOG000169644 HOVERGEN:HBG107494 KO:K15224
OMA:WIVEGRL OrthoDB:EOG44QT05 ChiTaRS:BAZ2A GenomeRNAi:11176
NextBio:42525 ArrayExpress:Q9UIF9 Bgee:Q9UIF9 CleanEx:HS_BAZ2A
Genevestigator:Q9UIF9 GermOnline:ENSG00000076108 GO:GO:0033553
GO:GO:0016922 GO:GO:0070869 GO:GO:0016575 GO:GO:0070933
GO:GO:0034770 Gene3D:3.30.890.10 Uniprot:Q9UIF9
Length = 1905
Score = 143 (55.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDS 300
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL +
Sbjct: 1671 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEG 1730
Query: 301 -FGFVPG 306
F PG
Sbjct: 1731 EFTQKPG 1737
>UNIPROTKB|F1SLA2 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IEA] [GO:0051567 "histone H3-K9 methylation"
evidence=IEA] [GO:0034770 "histone H4-K20 methylation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00384
SMART:SM00391 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL GO:GO:0070869
GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10 EMBL:CU468457
Ensembl:ENSSSCT00000000436 Uniprot:F1SLA2
Length = 1923
Score = 143 (55.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 242 EDELDQI-CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
E ++++ C C+ G + E +LLCD C++G H+YC P ++ VP G+W+C CL+
Sbjct: 1690 EKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLS 1744
>ZFIN|ZDB-GENE-120215-90 [details] [associations]
symbol:si:ch73-39g20.1 "si:ch73-39g20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-120215-90 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000064411 EMBL:CU570791 IPI:IPI00897032
Ensembl:ENSDART00000112648 Bgee:E7FCR1 Uniprot:E7FCR1
Length = 1263
Score = 141 (54.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 227 NCDQERVKVCHKVDKEDEL------DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPL 280
N D + K H + E E + C+ C H E++LLCD C+ G+H CL PPL
Sbjct: 746 NDDNKSEKGDHNSEAESEQSNEFPPEDACKHCGLANHPELILLCDLCDSGYHTACLRPPL 805
Query: 281 KHVPRGNWYCLEC 293
+P G W+C C
Sbjct: 806 MIIPDGEWFCPPC 818
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 141 (54.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 242 EDEL--DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
ED+ D C+ C H E++LLCD C+ G+H CL PPL +P G W+C C
Sbjct: 847 EDDTPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 900
>DICTYBASE|DDB_G0270880 [details] [associations]
symbol:gflC "PHD zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
dictyBase:DDB_G0270880 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG243978 RefSeq:XP_001134472.1
ProteinModelPortal:Q1ZXQ2 EnsemblProtists:DDB0231781 GeneID:8616983
KEGG:ddi:DDB_G0270880 InParanoid:Q1ZXQ2 OMA:HECEDEA Uniprot:Q1ZXQ2
Length = 1720
Score = 142 (55.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 1706 RSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLLS--APEI--YICAACKPQAEE 1757
+ LYC+C+K YD+ K MIAC +CDEWYH DCV + A I Y+CA C + E+
Sbjct: 1125 KDRLYCVCQKKYDKTKFMIACDRCDEWYHGDCVYISEKDAKRIKSYVCANCIKKKEK 1181
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 144 (55.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 37/104 (35%), Positives = 52/104 (50%)
Query: 231 ERVKVCHKVDK-EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWY 289
+R K K K DE + C+ C G G+ +L CD C +H CLSPPLK +P+G+W
Sbjct: 21 KRPKTNAKKQKFRDE--EYCKVCSDG--GD-LLCCDSCPSVYHRTCLSPPLKSIPKGDWI 75
Query: 290 CLECLNSDKDSFGFVPGKRYTVESFRRVADRAKKKRFRSGSASR 333
C C+ +PGK + S+R DR+ + R G R
Sbjct: 76 CPRCIP--------LPGKAEKILSWRWALDRSVELRTSKGEKRR 111
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 18/83 (21%), Positives = 34/83 (40%)
Query: 507 EPGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEE 564
+P + F S AG G+N A A V +DW PH A + + H+
Sbjct: 650 DPVSEHFVFLLSTRAG-GLGINLATADTVIIFDSDWNPHNDVQA--FSRAHRMGQKKKVM 706
Query: 565 LLCVVAKSDLDSKVSPYLKRELL 587
+ V + ++ ++ K +++
Sbjct: 707 IYRFVTHNSVEERIMQVAKHKMM 729
>UNIPROTKB|F1P0N4 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00589005 EMBL:AADN02033575
EMBL:AADN02033576 Ensembl:ENSGALT00000015230 ArrayExpress:F1P0N4
Uniprot:F1P0N4
Length = 379
Score = 133 (51.9 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC---LNSDKDSFGF 303
C C + + + +L CD C++G+H+YCL+PP+ P G+W C C L +FGF
Sbjct: 320 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERASAFGF 377
>ZFIN|ZDB-GENE-041024-2 [details] [associations]
symbol:dpf2 "D4, zinc and double PHD fingers family
2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
ZFIN:ZDB-GENE-041024-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
CTD:5977 KO:K13196 EMBL:BC083281 IPI:IPI00483161
RefSeq:NP_001007153.1 UniGene:Dr.37136 ProteinModelPortal:Q5XJL8
PRIDE:Q5XJL8 GeneID:474324 KEGG:dre:474324 InParanoid:Q5XJL8
NextBio:20850390 ArrayExpress:Q5XJL8 Bgee:Q5XJL8 Uniprot:Q5XJL8
Length = 400
Score = 133 (51.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C C + + + +L CD C++G+H+YCLSPP+ P G+W C CL
Sbjct: 337 CNICGTSENDDQLLFCDDCDRGYHMYCLSPPMSVPPEGSWSCHLCL 382
>UNIPROTKB|F1NQI2 [details] [associations]
symbol:PHF14 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 OMA:SQELSME
EMBL:AC145960 EMBL:AADN02000799 IPI:IPI00571930
Ensembl:ENSGALT00000017434 ArrayExpress:F1NQI2 Uniprot:F1NQI2
Length = 923
Score = 111 (44.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGN----WYCLEC 293
IC CK ++LLCD C +H+ CL PPL +PR W C EC
Sbjct: 681 ICGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSEC 730
Score = 81 (33.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 1436 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAY 1493
R + KP T C C+ + C C+ CYH CL P + + +
Sbjct: 808 RQSVLQKKPKSEDLRTECATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGW 867
Query: 1494 ICPYCQYFESE 1504
IC C S+
Sbjct: 868 ICQECDSTSSK 878
>FB|FBgn0000541 [details] [associations]
symbol:E(bx) "Enhancer of bithorax" species:7227 "Drosophila
melanogaster" [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016589 "NURF complex" evidence=NAS;IDA;TAS]
[GO:0006334 "nucleosome assembly" evidence=NAS] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0035073
"pupariation" evidence=IMP] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IGI;IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 SMART:SM00384 GO:GO:0007095 EMBL:AE014296
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045747 GO:GO:0006351 GO:GO:0048813 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0030097
GO:GO:0046331 GO:GO:0035073 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0035076 GO:GO:0042766 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 KO:K11728 OMA:DVIMEDF
GeneTree:ENSGT00660000095339 EMBL:AF417921 EMBL:AY051776
EMBL:BT023142 EMBL:BT022131 RefSeq:NP_001163304.1
RefSeq:NP_728505.1 RefSeq:NP_728507.1 RefSeq:NP_995946.1
UniGene:Dm.1449 HSSP:Q80TJ7 ProteinModelPortal:Q9W0T1 SMR:Q9W0T1
IntAct:Q9W0T1 MINT:MINT-1583525 STRING:Q9W0T1 PaxDb:Q9W0T1
EnsemblMetazoa:FBtr0072521 EnsemblMetazoa:FBtr0301348
EnsemblMetazoa:FBtr0332104 GeneID:44811 KEGG:dme:Dmel_CG32346
CTD:44811 FlyBase:FBgn0000541 InParanoid:Q9W0T1 OrthoDB:EOG466T1P
PhylomeDB:Q9W0T1 ChiTaRS:E(bx) GenomeRNAi:44811 NextBio:837653
Bgee:Q9W0T1 GermOnline:CG32346 Uniprot:Q9W0T1
Length = 2669
Score = 124 (48.7 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL--SAPEI--YICAACKPQA 1755
K R + LYCICR PYD+ K + C C W+H DCV + ++ ++ +IC CK +A
Sbjct: 2432 KLTRKKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDCK-RA 2490
Query: 1756 EES 1758
E+
Sbjct: 2491 RET 2493
Score = 122 (48.0 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 1699 ELKSLRARSMLYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAPEI---YICAACK 1752
+ K R LYC CR+PYDE I C +C +W+H CV +L S E Y+C C+
Sbjct: 2486 DCKRARETQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQ 2544
Score = 84 (34.6 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 246 DQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D C C G+ +L C+ C +H+ C+ PP+ VP +W C C
Sbjct: 339 DDHCRVCHR--LGD-LLCCETCPAVYHLECVDPPMNDVPTEDWQCGLC 383
Score = 59 (25.8 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 1453 CMCCESDSKELEFLI-CSACKDCYHLQCLRPTEVDRNHAEAYICPYCQ 1499
C+C + + +F + C C + +H C+ TE +IC C+
Sbjct: 2442 CIC-RTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDCK 2488
Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(4) = 6.6e-05
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 750 LREAEQFLWAGFEMDAVRDMVNKL 773
L A F W G M +M+ L
Sbjct: 596 LTTASDFKWIGITMGTTDNMITTL 619
Score = 38 (18.4 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 700 RQISSSNRPTTLTKKVKGVRVTMSQLVEQWL 730
R+++S K+ + + T Q+ E+W+
Sbjct: 1400 REVTSIRSGLRKRKRAESPQPTEPQITEEWV 1430
Score = 38 (18.4 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 1541 EAKDVLQEVVDVALECKTCLTDIVKFESCYLDKDLHVISNKLTITLKAREAAGVFDRQSN 1600
E K + V+++ E K L + + D D S + T K E V ++SN
Sbjct: 485 EHKHTKRSVIEIEQEAKNELLEKEVLDEDEKDGDAKSESQSIEGTKKQEECKMVTRQKSN 544
>UNIPROTKB|F1NS44 [details] [associations]
symbol:F1NS44 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00249 SMART:SM00466 Prosite:PS00518 GO:GO:0030154
GO:GO:0071158 GO:GO:0046872 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
InterPro:IPR021991 Pfam:PF12148 OMA:VNHNSKE EMBL:AADN02037704
EMBL:AADN02066291 EMBL:AADN02066292 EMBL:AADN02066293
EMBL:AADN02066294 EMBL:AADN02066295 EMBL:AADN02066296
EMBL:AADN02066297 EMBL:AADN02066298 EMBL:AADN02066299
IPI:IPI00589861 Ensembl:ENSGALT00000024273 Uniprot:F1NS44
Length = 755
Score = 137 (53.3 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 240 DKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLECLNSDK 298
DKE C C + LLCD CN +H+YCL+PPL +P +WYC C N
Sbjct: 296 DKECRFCS-CYLCGGKQDAHMQLLCDECNMAYHIYCLNPPLSKIPEDEDWYCPSCKNDSN 354
Query: 299 D 299
+
Sbjct: 355 E 355
Score = 59 (25.8 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRN-HAEAYICPYCQY 1500
+C+CC+ E + +C H C + + R+ AE + CP C+Y
Sbjct: 685 MCVCCQ------ELVYQPVTTECLHNVC--KSCLQRSFRAEVFTCPACRY 726
Score = 46 (21.3 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 1612 WRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKD 1647
W+ RV G+ +P +G I +G + P D
Sbjct: 416 WKFRVQVSEAGVHRPHVGGIHGRSNDGAYSLVLPGD 451
Score = 44 (20.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 20/83 (24%), Positives = 31/83 (37%)
Query: 1680 DKVFELIAEGENLPVYLEKELKSLRARSMLYCICRKPYDEKAMIACYQ--CDEWYHIDCV 1737
D+V + EG N LK L M C C++ + C C C+
Sbjct: 664 DEVLASLKEGPNF-------LKKLEQSFMCVC-CQELVYQPVTTECLHNVCKS-----CL 710
Query: 1738 KLLSAPEIYICAACKPQAEESST 1760
+ E++ C AC+ +S T
Sbjct: 711 QRSFRAEVFTCPACRYDLGKSYT 733
Score = 40 (19.1 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 1375 MLQLKELGEAAAFDCPELEKVLSKVDKVENWKQRCK-EIVGTSVGDKNSL 1423
M + K+LG + + LE + SK K + KQ K E S G++ S+
Sbjct: 582 MERTKKLGLSVQYPEGYLEAMASKEKKDKVKKQTVKQEPTSQSNGNQKSI 631
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 128 (50.1 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
EDE C C+ G GE ++ CD C + +H+ CLSPPL+ +P G W C CL
Sbjct: 304 EDE----CAVCRDG--GE-LICCDGCPRAFHLACLSPPLRDIPSGTWRCSSCL 349
Score = 56 (24.8 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
P G S C C D ++ L C+ C +H +C P R A C +C
Sbjct: 433 PQGPASGARCGVC-GDGADV--LRCAHCAAAFHWRCHFPAGAARPGASPR-CRFC 483
Score = 47 (21.6 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 819 PCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKL 875
P P L L++ EEAR L +E A + A ++ LL + S +P+ +++ L
Sbjct: 369 PAETPVLLGLRSAGEEARGLPREPPAGMDAA--VTYKHLL-APPSAVPLPVLDPSAL 422
Score = 38 (18.4 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 367 GFPRVCDHRPESVDANVWNEYCNSPWNLNNLPKLKGSILR 406
G PR P +DA V ++ +P + LP L S LR
Sbjct: 387 GLPR---EPPAGMDAAVTYKHLLAPPSAVPLPVLDPSALR 423
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 129 (50.5 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCVKLL-SAPEI---YICAACKPQA 1755
K + + LYCIC+ PYDE K I C +C WYH CV +L S E+ Y+C C+
Sbjct: 2667 KETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQ-ST 2725
Query: 1756 EESST 1760
E++ T
Sbjct: 2726 EDAMT 2730
Score = 97 (39.2 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 244 ELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+ D C C G+ +L C+ C+ +H+ C+ PPL+ VP W C C+
Sbjct: 190 QYDDHCRVCHK--LGD-LLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCV 237
Score = 67 (28.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1456 CESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYIC 1495
C K + L C C YHL+C++P EV + + +C
Sbjct: 195 CRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 236
Score = 41 (19.5 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 1317 KRCKLSDVEEVLAGCKGINFSFPVVIGELTSAIQKHKLWQEQVHQF 1362
K+ K + EE + + ++FPV KH++W+++ ++
Sbjct: 795 KKEKKQEEEETMQQATWVKYTFPV----------KHQVWKQKGEEY 830
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 1139 LASAFAVAPASCS--LLRLESLKDLVSQSKFLKISLKEQTELE 1179
+ + AV AS L R++ L+D + K +I +K + L+
Sbjct: 2423 IQNVVAVQAASVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQ 2465
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(4) = 0.00013
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 1224 ITSMESAANCGLSLGFDFHEISELQNACSTLHWCKKALSFLSVSPSLEDV-ESLMAVAEG 1282
I S+ A + LG D S L+N+ T+ + + V S E + E L+ +G
Sbjct: 1196 IPSLSKAVDFEGKLGCDSEYNSTLENSSDTMSVQDSSEEDMIVQNSNESISEQLITQEQG 1255
Score = 38 (18.4 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 575 DSKVSPYLKRELLRVYTKERM 595
D+K YLK E LR ++ ++
Sbjct: 1341 DNKAKVYLKGECLRDISESKI 1361
Score = 37 (18.1 bits), Expect = 8.2e-05, Sum P(4) = 8.2e-05
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1133 KNSELFLASAFAVAPASCSLLRLESLKDLV--SQSKFLKISLKEQTELEKVINN 1184
K S+L A A + L + E + LV SQ + ++S K++ ++ INN
Sbjct: 590 KLSQLKSQQVAAAAHEANKLFK-EGKEVLVVNSQGEISRLSTKKEVVMKGNINN 642
>UNIPROTKB|E9PE19 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC006534
EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581 ChiTaRS:BPTF
IPI:IPI00384109 PRIDE:E9PE19 Ensembl:ENST00000342579
UCSC:uc002jgh.3 ArrayExpress:E9PE19 Bgee:E9PE19 Uniprot:E9PE19
Length = 650
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 1688 EGENLPVYLEKELKSLRARSM--LYCICRKPYDEKAM-IACYQCDEWYHIDCVKLL-SAP 1743
E + + VY+ + K + S LYCICR PYDE I C +C WYH CV +L S
Sbjct: 449 EAKKMDVYICNDCKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEA 508
Query: 1744 EI---YICAACKPQAEESST 1760
E+ Y+C C+ E++ T
Sbjct: 509 ELIDEYVCPQCQ-STEDAMT 527
Score = 135 (52.6 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 1701 KSLRARSMLYCICRKPYDE-KAMIACYQCDEWYHIDCV----KLLSAPEIYICAACKPQA 1755
K + + LYCIC+ PYDE K I C C WYH +CV K ++YIC CK +A
Sbjct: 406 KETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAKKMDVYICNDCK-RA 464
Query: 1756 EESSTPQ 1762
+E S+ +
Sbjct: 465 QEGSSEE 471
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/69 (18%), Positives = 31/69 (44%)
Query: 318 ADRAKKKRFRSGSASRVQMEKKFWEIVEGAAGNVEVMYGSDLDTSIYGSGFPRVCDHRPE 377
+ ++KKK+ S ++ + + K + I + + G DL T+ Y + + +
Sbjct: 392 SSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECVGITEKEAK 451
Query: 378 SVDANVWNE 386
+D + N+
Sbjct: 452 KMDVYICND 460
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 122 (48.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 238 KVDKEDELDQ--ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
K++K +E + CE+CK GE +LLCD C + +H C+ ++ P G+W C C+
Sbjct: 246 KLEKGEEAENNDYCEECKQD--GE-LLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE 302
Query: 296 SDKDSFGFVPGKR 308
+ P K+
Sbjct: 303 HGPEVVKEEPAKQ 315
Score = 75 (31.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 1453 CMCCESDSKELE-FLICSACKDCYHLQCLRP--TEVDRNHAEAYICPYCQYFESE 1504
C C KE E L+C +C +H C+ P TEV + E + CP C+ + E
Sbjct: 320 CKIC----KETENLLLCDSCVCSFHAYCIDPPLTEVPKE--ETWSCPRCETVKPE 368
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 122 (48.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 238 KVDKEDELDQ--ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLN 295
K++K +E + CE+CK GE +LLCD C + +H C+ ++ P G+W C C+
Sbjct: 246 KLEKGEEAENNDYCEECKQD--GE-LLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIE 302
Query: 296 SDKDSFGFVPGKR 308
+ P K+
Sbjct: 303 HGPEVVKEEPAKQ 315
Score = 75 (31.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 1453 CMCCESDSKELE-FLICSACKDCYHLQCLRP--TEVDRNHAEAYICPYCQYFESE 1504
C C KE E L+C +C +H C+ P TEV + E + CP C+ + E
Sbjct: 320 CKIC----KETENLLLCDSCVCSFHAYCIDPPLTEVPKE--ETWSCPRCETVKPE 368
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 139 (54.0 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 238 KVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
+ +++D + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 422 EAEEDDHHMEFCRVCKDG--GE-LLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRC 474
Score = 121 (47.7 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 349 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 397
Score = 88 (36.0 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C +C YH+ CL P + + E +ICP C
Sbjct: 430 MEFCRVCK-DGGEL--LCCDSCPSSYHIHCLNPPLPEIPNGE-WICPRC 474
Score = 62 (26.9 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1099 PGAPQFVFLLSTRAG-GLGINLATADTVVIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1155
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V K+ ++ +++ K++++
Sbjct: 1156 YRFVTKASVEERITQVAKKKMM 1177
Score = 40 (19.1 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 1636 KEGLLMNISPKDHYRQKLMELNRIGSQWA 1664
++ +L I R+K+ E + QW+
Sbjct: 1471 RQHVLTRIGVMSLIRKKVQEFEHVNGQWS 1499
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 1659 IGSQWADVAKKVVLDSGALSLDKVFELIAEGEN 1691
+GS+ ++K+ + D +++F+ EGEN
Sbjct: 1187 LGSKTGSMSKQELDDILKFGTEELFKDEGEGEN 1219
Score = 38 (18.4 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 890 RKCISNKCPA-AIEIDVLYKLESEALDLKIDV 920
++ +S PA A+ VL +LE D+K DV
Sbjct: 1857 KESMSGNKPANAVLHKVLKQLEELLSDMKADV 1888
>UNIPROTKB|D4ADM0 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00968435 Ensembl:ENSRNOT00000055502 OMA:SPHPEEL
ArrayExpress:D4ADM0 Uniprot:D4ADM0
Length = 733
Score = 135 (52.6 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNW---YCLECLNSDKDSFGF 303
+CE C +LLCD C+ +H YCL PPL VP+G W +C+ C+ S GF
Sbjct: 674 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGF 732
>UNIPROTKB|F1M4B8 [details] [associations]
symbol:Phf14 "Protein Phf14" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00566375 Ensembl:ENSRNOT00000007707
RGD:1563764 ArrayExpress:F1M4B8 Uniprot:F1M4B8
Length = 924
Score = 107 (42.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGN----WYCLEC 293
C CK ++LLCD C +H+ CL PPL +PR W C EC
Sbjct: 719 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSEC 767
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/71 (25%), Positives = 27/71 (38%)
Query: 1436 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAY 1493
R + KP T C C+ + + C C+ CYH CL P + + +
Sbjct: 845 RQSVLQKKPKAEDLRTECSTCKGTGENENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGW 904
Query: 1494 ICPYCQYFESE 1504
IC C S+
Sbjct: 905 ICQECDSSSSK 915
>UNIPROTKB|F1MG25 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00906306
Ensembl:ENSBTAT00000027534 Uniprot:F1MG25
Length = 1456
Score = 138 (53.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1223 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1268
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C C + + + +L CD C++G+H+YCLSPPL P G+W C C+
Sbjct: 445 CSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLCM 490
>ZFIN|ZDB-GENE-060223-2 [details] [associations]
symbol:mll2 "myeloid/lymphoid or mixed-lineage
leukemia 2" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 ZFIN:ZDB-GENE-060223-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 SMART:SM00398
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:CR352210
EMBL:CR387931 EMBL:CT573331 IPI:IPI00627796
Ensembl:ENSDART00000053863 Uniprot:E7F2F7
Length = 4967
Score = 133 (51.9 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 247 QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC-LNSDKDSFGF-V 304
++C+ C+ ML+CD C+KG+H +CL P + VP +W C C + D G +
Sbjct: 264 KVCQTCRQPGEDSKMLVCDACDKGYHTFCLLPAMDSVPPDSWKCKRCRVCIDCGMRGLKL 323
Query: 305 PGKRYTVESFRRVADRAKKKR 325
PG ES+ V + +++R
Sbjct: 324 PGSEQWFESYT-VCEGCQRRR 343
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 1707 SMLYC-ICRKPY-DEKAMIACYQCDEWYHIDCVKLLSAPEI-------YICAACKP 1753
S++ C +C + + +E+ ++ C CD W H C L + E+ + C AC P
Sbjct: 946 SLVTCPVCHENFMEEELLLQCQHCDRWVHAVCESLYTEDEVEQASDEGFACTACTP 1001
Score = 82 (33.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 1704 RARSMLYCICRKPYDEKAMIA--CYQCDEWYHIDCVKLLSAPEIY-ICAACKPQAEESST 1760
R R+ + +C K + + C C W H DC L PE IC CK +E S
Sbjct: 341 RRRTSVCGVCSKATEPSVSLQHHCAICHRWVHSDCASLSGPPEEKCICVLCKEIPDEVSV 400
Query: 1761 PQNV 1764
V
Sbjct: 401 EAEV 404
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1452 LCMCCESDSKELE--FLICSACKDCYHLQCL 1480
+C+ C S + +E L C+ C CYH C+
Sbjct: 822 MCVVCGSFGQGVEGQLLACAQCAQCYHPYCV 852
Score = 60 (26.2 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRP 1482
+C C S L+C C YH CL P
Sbjct: 872 VCEVCGKASDPSRLLLCDDCDVSYHTYCLDP 902
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 1785 NSRKKLRKAEPGLAQKML 1802
NSRKK +K E G + ++
Sbjct: 3914 NSRKKTKKEEVGKTEAIM 3931
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(5) = 0.00012
Identities = 26/93 (27%), Positives = 38/93 (40%)
Query: 1085 EERAADILIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFA 1144
EE D L+ CE + + Q+ + P L V +E S ++S FL S
Sbjct: 630 EESLDDSLLKDESQCEEDQARKELQED--MKPEL--VLDETSNLSHGDESSSGFLGSP-- 683
Query: 1145 VAPASCSLLRLESLKDLVSQSKFLKISLKEQTE 1177
A A +L +E LV + SL +TE
Sbjct: 684 -AEADSQMLSMEL--SLVPAGRTRSDSLLTETE 713
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 1797 LAQKMLAIANNSSVFDCSSGIDNLWWHNRKPFRR 1830
L +M + S+++ ++W R P RR
Sbjct: 4622 LPSQMAVFHSPSAIYPVGYEATRIYWSTRVPNRR 4655
Score = 37 (18.1 bits), Expect = 0.00027, Sum P(5) = 0.00027
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 1770 NAEFLEPKTPSPKHTNSRKKLRKAEPGLAQKML 1802
N + + P +H ++L++ + LAQ+ L
Sbjct: 3439 NIQAFIAQNPQLRHLTPSQQLQQIQAMLAQRQL 3471
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 234 KVCHKVDK-EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLE 292
+V H K EDE C C+ G GE ++ CD C + +H+ CLSPPL+ +P G W C
Sbjct: 80 RVLHPSPKNEDE----CAVCRDG--GE-LICCDGCPRAFHLACLSPPLREIPSGTWRCSS 132
Query: 293 CLNS 296
CL +
Sbjct: 133 CLQA 136
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 1444 PHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDR 1487
P G ++ C + L C+ C +H +C P R
Sbjct: 215 PEGQQNLAPGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSR 258
>ZFIN|ZDB-GENE-040426-2039 [details] [associations]
symbol:uhrf1 "ubiquitin-like, containing PHD and
RING finger domains, 1" species:7955 "Danio rerio" [GO:0042393
"histone binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0031100 "organ regeneration" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS;IMP]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0000790 "nuclear
chromatin" evidence=ISS] [GO:0000791 "euchromatin" evidence=ISS]
[GO:0000792 "heterochromatin" evidence=ISS] [GO:0044729
"hemi-methylated DNA-binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00299 Prosite:PS00518
ZFIN:ZDB-GENE-040426-2039 GO:GO:0005737 GO:GO:0046872 GO:GO:0031100
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0002088
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
KO:K10638 Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY648713 EMBL:BX927276 EMBL:FP360035 EMBL:BC058055
IPI:IPI00497177 RefSeq:NP_998242.1 RefSeq:XP_003201004.1
UniGene:Dr.77703 PRIDE:E7EZF3 Ensembl:ENSDART00000012551
Ensembl:ENSDART00000121555 Ensembl:ENSDART00000122573
Ensembl:ENSDART00000126951 GeneID:100538017 GeneID:406350
KEGG:dre:100538017 KEGG:dre:406350 NextBio:20817968
ArrayExpress:E7EZF3 Bgee:E7EZF3 Uniprot:E7EZF3
Length = 776
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 234 KVCHKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRG-NWYCLE 292
KVC K++ C C + LLCD C+ +H YCL+PPL +P +WYC +
Sbjct: 301 KVCKDDPKKNCRVCNCHVCGIKQDPDKQLLCDECDMAFHTYCLNPPLTTIPDDEDWYCPD 360
Query: 293 CLN 295
C N
Sbjct: 361 CRN 363
Score = 63 (27.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 577 KVSPYLKRELLRVYTKERMWRERLWRKGIIKSTPMGPRKCPEYVG-TEEDPTCIICRQYL 635
KV Y + + K+ ++LW + + +S +GPR +V EE CI C++ +
Sbjct: 659 KVEAYKLSKEQKALIKDDELNKKLWDEAM-ESLSLGPR----FVNKVEEVFLCICCQEVV 713
Query: 636 YLSAVACRCRPAAFVCLEHWEHLCECKTRKLHLLYRHTLAELYDL 680
Y + C+ VC E + + K RH L + Y +
Sbjct: 714 Y-QPITTECQHN--VCRECLQRSFKAKVYTCPAC-RHDLGKNYQM 754
Score = 55 (24.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 1452 LCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYCQYFESESVSQFGG 1511
LC+CC+ E + +C H C R A+ Y CP C++ ++
Sbjct: 705 LCICCQ------EVVYQPITTECQHNVC-RECLQRSFKAKVYTCPACRHDLGKNYQMAVN 757
Query: 1512 SPLR 1515
PL+
Sbjct: 758 KPLQ 761
>UNIPROTKB|F1P0N5 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00598666 OMA:TNMTEAV
EMBL:AADN02033575 EMBL:AADN02033576 Ensembl:ENSGALT00000015229
ArrayExpress:F1P0N5 Uniprot:F1P0N5
Length = 416
Score = 133 (51.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC---LNSDKDSFGF 303
C C + + + +L CD C++G+H+YCL+PP+ P G+W C C L +FGF
Sbjct: 357 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERASAFGF 414
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 33 YYPTEDEFKDPLEYICKIRAEAERYGICKI 62
+ P + EF E+I K+ + R+ CK+
Sbjct: 93 HLPGKTEFITETEFITKMSVDLRRFLSCKL 122
>FB|FBgn0263667 [details] [associations]
symbol:Lpt "Lost PHDs of trr" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0051568
"histone H3-K4 methylation" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0044666 "MLL3/4 complex"
evidence=IDA] [GO:0035076 "ecdysone receptor-mediated signaling
pathway" evidence=IGI] [GO:0071390 "cellular response to ecdysone"
evidence=IMP] [GO:1900114 "positive regulation of histone H3-K9
trimethylation" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0008230
"ecdysone receptor holocomplex" evidence=IPI] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0018990
"ecdysis, chitin-based cuticle" evidence=IMP] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00109
SMART:SM00184 SMART:SM00249 EMBL:AE013599 GO:GO:0006911
GO:GO:0035556 GO:GO:0046872 GO:GO:0007474 GO:GO:0008270
GO:GO:0003682 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 GO:GO:0005700
GO:GO:0035076 GO:GO:0051568 GO:GO:0030374 GO:GO:0018990
GO:GO:0044666 HSSP:Q14839 GeneTree:ENSGT00690000101661
GO:GO:1900114 GO:GO:0008230 FlyBase:FBgn0263667 EMBL:BT024446
RefSeq:NP_611847.2 UniGene:Dm.4536 SMR:Q9W1H0 MINT:MINT-284602
EnsemblMetazoa:FBtr0072134 GeneID:37795 KEGG:dme:Dmel_CG5591
UCSC:CG5591-RA InParanoid:Q9W1H0 OMA:LYANTEH GenomeRNAi:37795
NextBio:805447 Uniprot:Q9W1H0
Length = 1482
Score = 134 (52.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
+CE C +LLCD C+ +H+YC++PPL+ VP GNW C C
Sbjct: 580 VCEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFC 625
Score = 102 (41.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 231 ERVKVCHKVDKEDELDQICEQCKS-GLHGE-VMLLCDRCNKGWHVYCLS-PPLKHVPRGN 287
+++ +C DK + IC C S G+ + VM+ C +C + +H YC P + + +
Sbjct: 513 KKLLLCSARDKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKG 572
Query: 288 WYCLEC 293
W CL+C
Sbjct: 573 WRCLDC 578
Score = 81 (33.6 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 1440 IYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAYICPY 1497
I K + T+C C + E L+C C YH+ C+ P V + + C
Sbjct: 568 ILQKGWRCLDCTVCEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTL 627
Query: 1498 CQYFESESV--SQFGGS 1512
CQ S+FG S
Sbjct: 628 CQKCGRNPTEKSEFGDS 644
Score = 59 (25.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/78 (20%), Positives = 31/78 (39%)
Query: 1712 ICRKPYDEKAMIA-CYQCDEWYHIDCVKL---LSAPE----IYICAACKPQAEESSTPQN 1763
+C+ Y MI C C+ W H C + L+ +Y C C+ +++ +
Sbjct: 660 VCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTIDHYDNNVYKCFKCRCSTRSTNSLAD 719
Query: 1764 VDGGRTNAEFLEPKTPSP 1781
G ++ + P+ P
Sbjct: 720 AKFGNEDSLAITPQGSKP 737
>UNIPROTKB|F1PMA7 [details] [associations]
symbol:PHF14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 OMA:SQELSME
EMBL:AAEX03009333 EMBL:AAEX03009334 Ensembl:ENSCAFT00000003573
Uniprot:F1PMA7
Length = 847
Score = 107 (42.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGN----WYCLEC 293
C CK ++LLCD C +H+ CL PPL +PR W C EC
Sbjct: 627 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSEC 675
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 1436 RSLYIYNKPHGSVSMTLCMCCESDSKELEFLICSACKDCYHLQCLRPT--EVDRNHAEAY 1493
R + KP T C C+ + C C+ CYH CL P + + +
Sbjct: 753 RQSVLQKKPKAEDLRTECATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGW 812
Query: 1494 ICPYCQYFESE 1504
IC C S+
Sbjct: 813 ICQECDSSSSK 823
>TAIR|locus:2096672 [details] [associations]
symbol:MBD9 "methyl-CPG-binding domain 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0043967 "histone H4 acetylation" evidence=IMP]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0042393 "histone binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] InterPro:IPR001841 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50302 PROSITE:PS50982 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0009506 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0048573 EMBL:AC009325 PROSITE:PS00633
GO:GO:0010223 GO:GO:0043966 GO:GO:0004402 GO:GO:0008327
EMBL:AC010870 eggNOG:NOG79337 UniGene:At.41275 UniGene:At.47815
HSSP:Q14839 IPI:IPI00538023 RefSeq:NP_186795.1
ProteinModelPortal:Q9SGH2 SMR:Q9SGH2 PaxDb:Q9SGH2 PRIDE:Q9SGH2
EnsemblPlants:AT3G01460.1 GeneID:821132 KEGG:ath:AT3G01460
TAIR:At3g01460 HOGENOM:HOG000153462 InParanoid:Q9SGH2 OMA:GTRIRKC
PhylomeDB:Q9SGH2 ProtClustDB:CLSN2684998 Genevestigator:Q9SGH2
Uniprot:Q9SGH2
Length = 2176
Score = 154 (59.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/101 (32%), Positives = 54/101 (53%)
Query: 237 HKVDKEDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNS 296
+K+ K + +C+ C + +LLCD C+ +H YCL+PPL +P GNWYC C+ +
Sbjct: 1278 NKLPKAPWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIA 1337
Query: 297 DKDSFGFVPGKRYTVESFRRVADRAKKKRFRSGSASRVQME 337
+ + + +ES++ V R +K R G +R ME
Sbjct: 1338 KRMA-------QEALESYKLV--RRRKGRKYQGELTRASME 1369
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 844 AALSACSKISELELLYSRASGLPICIVESEKLS 876
++LSA +KIS L L R L I+ + ++
Sbjct: 2099 SSLSAAAKISTLSALSVRIFSLDAAIIYDKPIT 2131
Score = 37 (18.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 1120 EVQNEISTAKSWLKNSEL 1137
E + EIS WL + +L
Sbjct: 1696 ETETEISELVQWLHDDDL 1713
>UNIPROTKB|Q9NRL2 [details] [associations]
symbol:BAZ1A "Bromodomain adjacent to zinc finger domain
protein 1A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008623 "CHRAC" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0016590 "ACF complex" evidence=TAS] [GO:0004402
"histone acetyltransferase activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0006261 GO:GO:0006338 EMBL:CH471078
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000228 EMBL:AF213467 EMBL:AF221130
EMBL:AB032252 EMBL:AL121603 EMBL:AL355885 EMBL:AF161435
EMBL:AL050089 IPI:IPI00383565 IPI:IPI00412415 PIR:T08738
RefSeq:NP_038476.2 RefSeq:NP_872589.1 UniGene:Hs.509140
ProteinModelPortal:Q9NRL2 SMR:Q9NRL2 IntAct:Q9NRL2
MINT:MINT-1183777 STRING:Q9NRL2 PhosphoSite:Q9NRL2 DMDM:116241266
PaxDb:Q9NRL2 PRIDE:Q9NRL2 Ensembl:ENST00000358716
Ensembl:ENST00000360310 Ensembl:ENST00000382422 GeneID:11177
KEGG:hsa:11177 UCSC:uc001wsk.3 UCSC:uc001wsl.3 CTD:11177
GeneCards:GC14M035221 H-InvDB:HIX0037904 HGNC:HGNC:960
HPA:HPA002730 MIM:605680 neXtProt:NX_Q9NRL2 PharmGKB:PA25270
HOGENOM:HOG000095179 HOVERGEN:HBG080889 InParanoid:Q9NRL2 KO:K11655
OMA:SSFQNNV OrthoDB:EOG49GKFR PhylomeDB:Q9NRL2 ChiTaRS:BAZ1A
GenomeRNAi:11177 NextBio:42529 ArrayExpress:Q9NRL2 Bgee:Q9NRL2
CleanEx:HS_BAZ1A Genevestigator:Q9NRL2 GermOnline:ENSG00000198604
GO:GO:0016590 GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136 Uniprot:Q9NRL2
Length = 1556
Score = 144 (55.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/100 (33%), Positives = 51/100 (51%)
Query: 245 LDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECLNSDKDSFGFV 304
L+ C+ C+ E M+LCD C++G H YC+ P LK VP G+W+C EC + S
Sbjct: 1147 LNARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQR-SRRLS 1205
Query: 305 PGKRYTVESFRRVADRAKKKRFR-SGSASRVQMEKKFWEI 343
+R ++ES V D + G Q E++ +E+
Sbjct: 1206 SRQRPSLESDEDVEDSMGGEDDEVDGDEEEGQSEEEEYEV 1245
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/60 (20%), Positives = 32/60 (53%)
Query: 1092 LIHKAQMCEFEDIIRASQDIFVVLPSLDEVQNEISTAKSWLKNSELFLASAFAVAPASCS 1151
L+ K Q+ ++ DII+ + ++ +++ + ++ A ++ + EL ++ F P + S
Sbjct: 1457 LVSKIQVPDYYDIIKKPIALNIIREKVNKCEYKL--ASEFIDDIELMFSNCFEYNPRNTS 1514
>UNIPROTKB|I3LN35 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU915672
Ensembl:ENSSSCT00000024565 Uniprot:I3LN35
Length = 1929
Score = 138 (53.6 bits), Expect = 0.00015, P = 0.00015
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1878 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1923
>UNIPROTKB|F1NRS9 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AADN02017093
EMBL:AADN02017094 EMBL:AADN02017095 EMBL:AADN02017096
IPI:IPI00821034 Ensembl:ENSGALT00000037696 ArrayExpress:F1NRS9
Uniprot:F1NRS9
Length = 1981
Score = 138 (53.6 bits), Expect = 0.00015, P = 0.00015
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1749 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1794
>UNIPROTKB|F1RPS1 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:CU915672 Ensembl:ENSSSCT00000017294 Uniprot:F1RPS1
Length = 1988
Score = 138 (53.6 bits), Expect = 0.00015, P = 0.00015
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1937 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1982
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 139 (54.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 226 NNCDQERV--KVCHKVDKEDELD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+N + E + +V +++ED+ + C CK G GE +L CD C +H++CL+PPL
Sbjct: 419 DNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDG--GE-LLCCDTCPSSYHIHCLNPPLPE 475
Query: 283 VPRGNWYCLEC 293
+P G W C C
Sbjct: 476 IPNGEWLCPRC 486
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 359 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 85 (35.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YH+ CL P + + E ++CP C
Sbjct: 442 MEFCRVCK-DGGEL--LCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRC 486
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1108 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1164
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ K++++
Sbjct: 1165 YRFVTRASVEERITQVAKKKMM 1186
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 36/160 (22%), Positives = 65/160 (40%)
Query: 763 MDAVRDMVNKL--IEGRRWAEGIRDCLHKAENWS-SLPGSDSEKVRLDCV---NELLGFD 816
M +R V + + GR W+ + + EN S PGS S K +
Sbjct: 1492 MSLIRKKVQEFEHVNGR-WS--MPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPA 1548
Query: 817 PLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLS 876
P+P E G I +N +E S+ E +A E + AS +VE +
Sbjct: 1549 PVPPAEDGIKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAPASEDEKVVVEPPEGE 1608
Query: 877 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 916
+++ A+V ++ + + + A +++ + E A+DL
Sbjct: 1609 EKVEKAEV-KERTEEPMETEPKGAADVEKVE--EKSAIDL 1645
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 1609 RNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAK 1668
+ L +V++ KL PT+ Y ++ ++ + + ++ LN + WA
Sbjct: 680 KKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTD 739
Query: 1669 KVVLDSGAL 1677
++ D L
Sbjct: 740 TILADEMGL 748
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 139 (54.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 226 NNCDQERV--KVCHKVDKEDELD-QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH 282
+N + E + +V +++ED+ + C CK G GE +L CD C +H++CL+PPL
Sbjct: 426 DNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDG--GE-LLCCDTCPSSYHIHCLNPPLPE 482
Query: 283 VPRGNWYCLEC 293
+P G W C C
Sbjct: 483 IPNGEWLCPRC 493
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 366 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 85 (35.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YH+ CL P + + E ++CP C
Sbjct: 449 MEFCRVCK-DGGEL--LCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRC 493
Score = 59 (25.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1115 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1171
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ K++++
Sbjct: 1172 YRFVTRASVEERITQVAKKKMM 1193
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 36/160 (22%), Positives = 65/160 (40%)
Query: 763 MDAVRDMVNKL--IEGRRWAEGIRDCLHKAENWS-SLPGSDSEKVRLDCV---NELLGFD 816
M +R V + + GR W+ + + EN S PGS S K +
Sbjct: 1499 MSLIRKKVQEFEHVNGR-WS--MPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPA 1555
Query: 817 PLPCNEPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLS 876
P+P E G I +N +E S+ E +A E + AS +VE +
Sbjct: 1556 PVPPAEDGIKIEENSLKEEESIEGEKEVKSTAPETAIECTQAPAPASEDEKVVVEPPEGE 1615
Query: 877 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 916
+++ A+V ++ + + + A +++ + E A+DL
Sbjct: 1616 EKVEKAEV-KERTEEPMETEPKGAADVEKVE--EKSAIDL 1652
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 1609 RNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAK 1668
+ L +V++ KL PT+ Y ++ ++ + + ++ LN + WA
Sbjct: 687 KKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTD 746
Query: 1669 KVVLDSGAL 1677
++ D L
Sbjct: 747 TILADEMGL 755
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 133 (51.9 bits), Expect = 0.00016, P = 0.00016
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 248 ICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
+CE C +LLCD C+ +H YCL PPL+ VP+G W C C+
Sbjct: 666 VCEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 712
>UNIPROTKB|E2RP59 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AAEX03017693
Ensembl:ENSCAFT00000015012 Uniprot:E2RP59
Length = 2073
Score = 138 (53.6 bits), Expect = 0.00016, P = 0.00016
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1839 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1884
>UNIPROTKB|F1MCP3 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00733463
Ensembl:ENSBTAT00000046021 Uniprot:F1MCP3
Length = 2110
Score = 138 (53.6 bits), Expect = 0.00016, P = 0.00016
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1877 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1922
>UNIPROTKB|F1P2F7 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 IPI:IPI00572336
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 Ensembl:ENSGALT00000020542 ArrayExpress:F1P2F7
Uniprot:F1P2F7
Length = 2125
Score = 138 (53.6 bits), Expect = 0.00016, P = 0.00016
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1893 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1938
>UNIPROTKB|E1C3I8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 IPI:IPI00821728 Ensembl:ENSGALT00000037699
ArrayExpress:E1C3I8 Uniprot:E1C3I8
Length = 2126
Score = 138 (53.6 bits), Expect = 0.00016, P = 0.00016
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1894 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1939
>UNIPROTKB|Q9DE13 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 EMBL:AF224275 IPI:IPI00572336 RefSeq:NP_990008.1
UniGene:Gga.9252 ProteinModelPortal:Q9DE13 SMR:Q9DE13 PRIDE:Q9DE13
GeneID:395400 KEGG:gga:395400 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 NextBio:20815484 Uniprot:Q9DE13
Length = 2130
Score = 138 (53.6 bits), Expect = 0.00016, P = 0.00016
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1898 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1943
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 124 (48.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 241 KEDELDQICEQCKSGLHG-----EVMLLCDRCNKGWHVYCLSPPLKHVP-RGNWYCLEC 293
K+DE ++C C + G + L+CD C+ +H+YCL PPL VP WYC +C
Sbjct: 310 KDDER-KLCRMCACHVCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSVPPEEEWYCPDC 367
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 1453 CMCCESDSKELEFLIC--SACKDCYHLQCLRPTEVDRNH-AEAYICPYCQYFESESVSQF 1509
C+CC+ +C + CKDC +DR+ A+ + CP C+Y S +
Sbjct: 717 CICCQELVFRPITTVCQHNVCKDC----------LDRSFKAQVFSCPACRYDLGRSYAMT 766
Query: 1510 GGSPLR 1515
PL+
Sbjct: 767 VNQPLQ 772
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKH--VPRGNWYCLEC 293
C+ CK G G+ +L CD C +H+ C +PPL +P G W C C
Sbjct: 59 CDSCKEG--GD-LLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 139 (54.0 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 240 DKEDELD---QICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
D E+E D + C CK G GE +L CD C +H++CL+PPL +P G W C C
Sbjct: 440 DPEEEDDHHMEFCRVCKDG--GE-LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 366 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 85 (35.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YH+ CL P + + E ++CP C
Sbjct: 449 MEFCRVCK-DGGEL--LCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRC 493
Score = 59 (25.8 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 508 PGNFVITFPRSYHAGFNFGLNCAEA--VNFAPADWLPHGGFGADLYQQYHKAAVLSHEEL 565
PG F S AG G+N A A V +DW PH A + + H+ +
Sbjct: 1115 PGAQQFCFLLSTRAG-GLGINLATADTVIIYDSDWNPHNDIQA--FSRAHRIGQNKKVMI 1171
Query: 566 LCVVAKSDLDSKVSPYLKRELL 587
V ++ ++ +++ K++++
Sbjct: 1172 YRFVTRASVEERITQVAKKKMM 1193
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 38/160 (23%), Positives = 64/160 (40%)
Query: 763 MDAVRDMVNKL--IEGRRWAEGIRDCLHKAENWS-SLPGSDSEKVRLDCV-NELLGFDPL 818
M +R V + + GR W+ + + EN S PGS S K + P
Sbjct: 1499 MSLIRKKVQEFEHVNGR-WS--MPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPA 1555
Query: 819 PCN--EPGHLILQNYAEEARSLIQEINAALSACSKISELELLYSRASGLPICIVESEKLS 876
P E G I +N +E S+ E +A E + AS +VE ++
Sbjct: 1556 PAPPAEDGIKIEENSLKEEESVEGEKEVKSTAPEATVECTQPPAPASEDEKVLVEPPEVE 1615
Query: 877 QRISSAKVWRDSVRKCISNKCPAAIEIDVLYKLESEALDL 916
+++ A+V ++ + + + P + DV E A+DL
Sbjct: 1616 EKVEKAEV-KERTEEPMETE-PKGVA-DVEKVEEKSAVDL 1652
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 1609 RNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAK 1668
+ L +V++ KL PT+ Y ++ ++ + + ++ LN + WA
Sbjct: 687 KKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTD 746
Query: 1669 KVVLDSGAL 1677
++ D L
Sbjct: 747 TILADEMGL 755
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 121 (47.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 242 EDELDQICEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLEC 293
E + CE C+ G GE+ +LCD C + +H+ CL P ++ P G W C C
Sbjct: 366 ETDHQDYCEVCQQG--GEI-ILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 85 (35.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 1450 MTLCMCCESDSKELEFLICSACKDCYHLQCLRPTEVDRNHAEAYICPYC 1498
M C C+ D EL L C C YH+ CL P + + E ++CP C
Sbjct: 449 MEFCRVCK-DGGEL--LCCDTCPSSYHIHCLNPPLPEIPNGE-WLCPRC 493
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/69 (18%), Positives = 29/69 (42%)
Query: 1609 RNLWRVRVSKLLEGLTKPTIGQIQNYLKEGLLMNISPKDHYRQKLMELNRIGSQWADVAK 1668
+ L +V++ KL PT+ Y ++ ++ + + ++ LN + WA
Sbjct: 687 KKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTD 746
Query: 1669 KVVLDSGAL 1677
++ D L
Sbjct: 747 TILADEMGL 755
>UNIPROTKB|Q9UIF8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 EMBL:CH471058 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 EMBL:AB032255 EMBL:AB040909 EMBL:AL080173
EMBL:AL834381 EMBL:BC012576 EMBL:AK027612 IPI:IPI00061354
IPI:IPI00220295 IPI:IPI00873703 IPI:IPI00916292 IPI:IPI00929198
PIR:T12495 RefSeq:NP_038478.2 UniGene:Hs.470369 PDB:2E7O PDB:3G0L
PDB:3Q2F PDBsum:2E7O PDBsum:3G0L PDBsum:3Q2F
ProteinModelPortal:Q9UIF8 SMR:Q9UIF8 IntAct:Q9UIF8
MINT:MINT-1483920 STRING:Q9UIF8 PhosphoSite:Q9UIF8 DMDM:229462995
PaxDb:Q9UIF8 PRIDE:Q9UIF8 Ensembl:ENST00000343439
Ensembl:ENST00000355831 Ensembl:ENST00000392782
Ensembl:ENST00000392783 GeneID:29994 KEGG:hsa:29994 UCSC:uc002uao.3
UCSC:uc002uap.3 GeneCards:GC02M160139 H-InvDB:HIX0002531
HGNC:HGNC:963 HPA:HPA019819 MIM:605683 neXtProt:NX_Q9UIF8
PharmGKB:PA25273 InParanoid:Q9UIF8 OMA:DSDDQAD OrthoDB:EOG4WH8JW
BindingDB:Q9UIF8 ChEMBL:CHEMBL1741220 ChiTaRS:BAZ2B
EvolutionaryTrace:Q9UIF8 GenomeRNAi:29994 NextBio:52792
ArrayExpress:Q9UIF8 Bgee:Q9UIF8 CleanEx:HS_BAZ2B
Genevestigator:Q9UIF8 GermOnline:ENSG00000123636 Uniprot:Q9UIF8
Length = 2168
Score = 138 (53.6 bits), Expect = 0.00017, P = 0.00017
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 249 CEQCKSGLHGEVMLLCDRCNKGWHVYCLSPPLKHVPRGNWYCLECL 294
C+ C+ G + E++LLCD C+KG H YC P + +P G+W+C C+
Sbjct: 1934 CQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACI 1979
WARNING: HSPs involving 83 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1849 1791 0.00093 125 3 11 22 0.37 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 333
No. of states in DFA: 639 (68 KB)
Total size of DFA: 844 KB (2350 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 156.14u 0.13s 156.27t Elapsed: 00:00:07
Total cpu time: 156.24u 0.13s 156.37t Elapsed: 00:00:07
Start: Tue May 21 00:28:24 2013 End: Tue May 21 00:28:31 2013
WARNINGS ISSUED: 2