Query 000221
Match_columns 1837
No_of_seqs 708 out of 2354
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 17:23:53 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000221.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_0-3//hhsearch_pdb/000221hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i84_S Smooth muscle myosin he 1.0 1 1 109.0 11.5 15 123-137 152-166 (1184)
2 1i84_S Smooth muscle myosin he 1.0 1 1 106.8 11.6 16 77-92 167-182 (1184)
3 1c1g_A Tropomyosin; contractIl 1.0 1 1 75.8 47.4 282 861-1150 2-283 (284)
4 3vkg_A Dynein heavy chain, cyt 1.0 1 1 38.9 31.0 15 1748-1762 3127-3142(3245)
5 3na7_A HP0958; flagellar bioge 1.0 1 1 36.4 24.2 158 859-1016 12-171 (256)
6 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 31.5 19.6 16 63-78 78-93 (1080)
7 2v71_A Nuclear distribution pr 1.0 1 1 31.2 24.3 175 837-1050 3-177 (189)
8 2dfs_A Myosin-5A; myosin-V, in 1.0 1 1 29.0 19.8 13 124-136 140-152 (1080)
9 3oja_B Anopheles plasmodium-re 1.0 1 1 28.6 14.5 151 864-1014 427-581 (597)
10 3o0z_A RHO-associated protein 1.0 1 1 27.9 22.6 146 850-995 5-154 (168)
No 1
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=109.00 Aligned_cols=15 Identities=20% Similarity=0.107 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999998
Q 000221 123 NFARELANLRHQLKV 137 (1837)
Q Consensus 123 ~~~~~~~~~~~~~~~ 137 (1837)
+|+--..+.+.|+..
T Consensus 152 i~aia~~ay~~m~~~ 166 (1184)
T 1i84_S 152 IYAIADTAYRSMLQD 166 (1184)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 756678999987735
No 2
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=106.81 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=6.4
Q ss_pred HCCCCCCCCCCCCCCC
Q ss_conf 1013555445888886
Q 000221 77 NQNQNHLVETDVGSGS 92 (1837)
Q Consensus 77 ~~~~~~~~~~~~~~~~ 92 (1837)
..+|+-++.|-.|.|-
T Consensus 167 ~~~Q~i~isGeSGaGK 182 (1184)
T 1i84_S 167 REDQSILCTGESGAGK 182 (1184)
T ss_dssp TCCEEEECCCSTTSST
T ss_pred CCCCEEEEECCCCCCC
T ss_conf 8996799726888874
No 3
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=1.00 E-value=1 Score=75.81 Aligned_cols=282 Identities=13% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999838999999999999999999999999
Q 000221 861 TQLEQELGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEEAHIQTSKFAEA 940 (1837)
Q Consensus 861 ~~~e~el~~lk~el~~l~~el~e~~~~i~~le~el~~l~~~l~~l~~e~~~le~~~~~le~elek~~~el~~~~~~l~e~ 940 (1837)
..+...+..++.++..+...+..+...+..+...+..+...+..+......+...+..+...+..+...+......+..+
T Consensus 2 ~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (284)
T 1c1g_A 2 DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDA 81 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 37899999988768889999999999999999889888999999999999999999999999999999999999989877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899899999999977889999999999969999999999999999899779999999999999999999999999997
Q 000221 941 CASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEAYKTIKSLEDSLAQVEANVAMLTEQ 1020 (1837)
Q Consensus 941 ~~~i~~le~~l~~l~~el~~l~~eie~l~~~~~~le~ele~l~~el~~l~~kl~e~~~~i~~Le~~l~~lq~el~~l~~e 1020 (1837)
...+..+...+..+...+..+...+..+...+..+...+..+...+..+...+......+..+...+..+...+..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 161 (284)
T 1c1g_A 82 EADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRK 161 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999988988998898899999999999988888999999888777510667999999999999988889988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49999982799999999999999999999999999999999999999999999999999989639999999999999998
Q 000221 1021 NKEEAQASGAAAVLELEQVREEFVSQTSKLTEAYTTIKSLEDALSQVEANVAVLTEQNNVLQVGKTTLENELQMLKDEAG 1100 (1837)
Q Consensus 1021 ~~~~~q~~~~~~e~ele~lk~E~~~~~~~l~~~~~~i~~le~el~~le~~~~~l~eel~~le~~~~eLe~eL~~l~~el~ 1100 (1837)
. ......+..+...+......+..+...+..+...+..+...+..+...+..+...+..+...+..+...+.
T Consensus 162 ~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 233 (284)
T 1c1g_A 162 Y--------EEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLK 233 (284)
T ss_dssp H--------HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9--------99998899888889989998987887999999999999999999997587788899999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999979999999989899999999999999
Q 000221 1101 SQAVKLADAHTTIKSMEDALLKAKNDISVLEGEKRISDQEVSALNSKLNA 1150 (1837)
Q Consensus 1101 ~~~~klee~~~~l~ele~~l~~~~~~i~~Le~el~~~~~e~~~l~~kl~~ 1150 (1837)
.+...+......+..+...+..+...+..+...+..+...+..+...+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 283 (284)
T 1c1g_A 234 EAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS 283 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89988999998899999999999999999998899999999999997436
No 4
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=38.87 Aligned_cols=15 Identities=13% Similarity=0.049 Sum_probs=10.0
Q ss_pred CCCCCCCCEE-CCCCC
Q ss_conf 6799984000-13565
Q 000221 1748 RKGSTDHLTI-NIDSE 1762 (1837)
Q Consensus 1748 ~~~~~~~~~~-~~~~~ 1762 (1837)
.+.|-|.+.+ +.++-
T Consensus 3127 ~~~plD~l~l~~~~V~ 3142 (3245)
T 3vkg_A 3127 NGWSLENLRLHASSLG 3142 (3245)
T ss_dssp TC------CCCBC---
T ss_pred HCCCCCCCEEEEEEEE
T ss_conf 4887743303457874
No 5
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=1.00 E-value=1 Score=36.41 Aligned_cols=158 Identities=9% Similarity=0.096 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999998389999999999999999--9999
Q 000221 859 TKTQLEQELGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEEAHI--QTSK 936 (1837)
Q Consensus 859 ~l~~~e~el~~lk~el~~l~~el~e~~~~i~~le~el~~l~~~l~~l~~e~~~le~~~~~le~elek~~~el~~--~~~~ 936 (1837)
.+..+...+..+...+..+..++..+...+..+...+..+...+.++......++..+..+...+.+....+.. ..+.
T Consensus 12 ~LQ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE 91 (256)
T 3na7_A 12 EISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERE 91 (256)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 99999999999999998758999999999999999999999999999999999997899999999999999872589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999989989999999997788999999999996999999999999999989977999999999999999999999999
Q 000221 937 FAEACASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEAYKTIKSLEDSLAQVEANVAM 1016 (1837)
Q Consensus 937 l~e~~~~i~~le~~l~~l~~el~~l~~eie~l~~~~~~le~ele~l~~el~~l~~kl~e~~~~i~~Le~~l~~lq~el~~ 1016 (1837)
+..+...+..+...+..+...+..+...++.....+..+...+..++..+......++.....+..-...+..-...+..
T Consensus 92 ~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l~~ 171 (256)
T 3na7_A 92 LRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVE 171 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999885
No 6
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=31.54 Aligned_cols=16 Identities=19% Similarity=0.167 Sum_probs=8.8
Q ss_pred CCCCCHHHHHHHHHHC
Q ss_conf 8863014677442210
Q 000221 63 PSYSEENIVVSLKENQ 78 (1837)
Q Consensus 63 ~~~~~~~~~~~~~~~~ 78 (1837)
+..+|..++-.|+.--
T Consensus 78 ~~l~e~~vl~nL~~Ry 93 (1080)
T 2dfs_A 78 SYLHEPAVLHNLKVRF 93 (1080)
T ss_dssp SSCSHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHH
T ss_conf 4133678999999999
No 7
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=31.15 Aligned_cols=175 Identities=15% Similarity=0.191 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32244088899999999999999999999999999999999999999999999999999999999999999999999838
Q 000221 837 SVFKEPLEKVNWIASYINECHDTKTQLEQELGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGK 916 (1837)
Q Consensus 837 ~~~~el~eki~~~~~~~~elq~~l~~~e~el~~lk~el~~l~~el~e~~~~i~~le~el~~l~~~l~~l~~e~~~le~~~ 916 (1837)
+.|..+.+.+......+..+...+..++.++..+...-..++.++. .++..+.....++......+...+
T Consensus 3 ~~f~s~~ee~~ywk~~~~~~~q~~~~le~El~EFqesSrELE~ELE----------~eL~~~Ek~~~~L~~~~~~L~~E~ 72 (189)
T 2v71_A 3 MDFSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELE----------AQLVQAEQRNRDLQADNQRLKYEV 72 (189)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8889889999999999999999999999999999998999999999----------999999988999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999899899999999977889999999999969999999999999999899779999
Q 000221 917 KNVEEELEKAIEEAHIQTSKFAEACASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEA 996 (1837)
Q Consensus 917 ~~le~elek~~~el~~~~~~l~e~~~~i~~le~~l~~l~~el~~l~~eie~l~~~~~~le~ele~l~~el~~l~~kl~e~ 996 (1837)
..+..++.....+. ...+..++..+..+......+...+..+......+++.......-+..+..+++.+
T Consensus 73 e~~k~K~~~~~~e~----------~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~a 142 (189)
T 2v71_A 73 EALKEKLEHQYAQS----------YKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQA 142 (189)
T ss_dssp HHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998889----------99999999999999999999999999999971288899989996599999898899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999997499999827999999999999999999999
Q 000221 997 YKTIKSLEDSLAQVEANVAMLTEQNKEEAQASGAAAVLELEQVREEFVSQTSKL 1050 (1837)
Q Consensus 997 ~~~i~~Le~~l~~lq~el~~l~~e~~~~~q~~~~~~e~ele~lk~E~~~~~~~l 1050 (1837)
.....-++..+... ..+...++.++.++..++..+
T Consensus 143 iEr~alLE~El~EK-------------------e~l~~~~QRLkdE~rDLk~El 177 (189)
T 2v71_A 143 IERNAFLESELDEK-------------------ESLLVSVQRLKDEARDLRQEL 177 (189)
T ss_dssp HHHHHHHHHHHHHH-------------------HHHHCCC--------------
T ss_pred HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999898789889-------------------989999999898889889999
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=1.00 E-value=1 Score=29.03 Aligned_cols=13 Identities=15% Similarity=0.225 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q 000221 124 FARELANLRHQLK 136 (1837)
Q Consensus 124 ~~~~~~~~~~~~~ 136 (1837)
|+--..+.+.|+.
T Consensus 140 faiA~~Ay~~m~~ 152 (1080)
T 2dfs_A 140 FAVAEEAYKQMAR 152 (1080)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 7889999999873
No 9
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=1.00 E-value=1 Score=28.56 Aligned_cols=151 Identities=12% Similarity=0.102 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999838999999999999999----99999999
Q 000221 864 EQELGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEEAH----IQTSKFAE 939 (1837)
Q Consensus 864 e~el~~lk~el~~l~~el~e~~~~i~~le~el~~l~~~l~~l~~e~~~le~~~~~le~elek~~~el~----~~~~~l~e 939 (1837)
...+..+..................+.+..++......+..+..+....+..+.....++........ ........
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~e~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~ 506 (597)
T 3oja_B 427 TDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLARSSDN 506 (597)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf 42067888888888987510157749998889889999999999998899999999998655554027661124787888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999899899999999977889999999999969999999999999999899779999999999999999999999
Q 000221 940 ACASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVREEFASQTSKLTEAYKTIKSLEDSLAQVEANV 1014 (1837)
Q Consensus 940 ~~~~i~~le~~l~~l~~el~~l~~eie~l~~~~~~le~ele~l~~el~~l~~kl~e~~~~i~~Le~~l~~lq~el 1014 (1837)
+...+..+.........+.......+.........++.++..++..+......+.++.++...+..++.++..++
T Consensus 507 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 507 LNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999988643236788888877655420111367766488999873101478998888999999999999874
No 10
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=1.00 E-value=1 Score=27.92 Aligned_cols=146 Identities=16% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999999999999998389999999999999
Q 000221 850 ASYINECHDTKTQLEQELGNVKQEASALASELAETQSTMKSLEDALSVAEDKITQLADEKRQVEVGKKNVEEELEKAIEE 929 (1837)
Q Consensus 850 ~~~~~elq~~l~~~e~el~~lk~el~~l~~el~e~~~~i~~le~el~~l~~~l~~l~~e~~~le~~~~~le~elek~~~e 929 (1837)
...+..++.++..+...+..-......+.....++...+..++.....+...+..+...+..++..+..+...+..-+..
T Consensus 5 neKi~~LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~ 84 (168)
T 3o0z_A 5 NEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRD 84 (168)
T ss_dssp -----CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48889999999999999998678999999889999988998999978999999999988999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf 999999999999989989999999997788999999999996999999999999----999989977999
Q 000221 930 AHIQTSKFAEACASRKSLEDEMSVAKNNMSVLICEKEEAQASGAAAVVELEQVR----EEFASQTSKLTE 995 (1837)
Q Consensus 930 l~~~~~~l~e~~~~i~~le~~l~~l~~el~~l~~eie~l~~~~~~le~ele~l~----~el~~l~~kl~e 995 (1837)
.......+.++...+..+..++..+.........+...+...+..++.+...+. -++..+...+..
T Consensus 85 r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~~eq 154 (168)
T 3o0z_A 85 RGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQ 154 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8777789999999999999999999998999999999999998999989974047887779998989999
Done!