Query 000224
Match_columns 1833
No_of_seqs 918 out of 6387
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 00:11:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000224.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000224hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01257 rim_protein retinal- 100.0 3E-210 7E-215 2134.3 162.3 1544 113-1804 523-2258(2272)
2 KOG0059 Lipid exporter ABCA1 a 100.0 1.1E-83 2.3E-88 862.9 62.0 856 738-1800 2-880 (885)
3 KOG0055 Multidrug/pheromone ex 100.0 5.5E-79 1.2E-83 787.6 58.6 224 558-790 349-584 (1228)
4 COG1123 ATPase components of v 100.0 3.8E-77 8.3E-82 727.7 51.3 225 558-782 4-244 (539)
5 TIGR00956 3a01205 Pleiotropic 100.0 2.1E-75 4.6E-80 812.4 75.3 833 574-1688 72-989 (1394)
6 PRK10261 glutathione transport 100.0 9.3E-76 2E-80 765.9 57.0 229 1463-1692 312-553 (623)
7 TIGR03269 met_CoM_red_A2 methy 100.0 1.6E-74 3.5E-79 744.0 57.1 227 1464-1693 279-518 (520)
8 PRK13549 xylose transporter AT 100.0 1.2E-74 2.6E-79 742.3 52.4 214 558-775 4-225 (506)
9 PRK15134 microcin C ABC transp 100.0 3.6E-74 7.9E-79 741.7 53.9 227 1464-1692 275-515 (529)
10 PLN03140 ABC transporter G fam 100.0 6.2E-72 1.3E-76 773.0 77.4 822 575-1688 177-1106(1470)
11 PRK09700 D-allose transporter 100.0 4.3E-74 9.3E-79 738.4 51.1 215 558-776 4-228 (510)
12 PRK10762 D-ribose transporter 100.0 1.5E-73 3.3E-78 731.2 52.9 213 559-775 4-223 (501)
13 TIGR02633 xylG D-xylose ABC tr 100.0 4.8E-73 1E-77 727.5 51.2 211 560-774 2-222 (500)
14 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-72 2.3E-77 723.7 53.4 212 558-777 10-224 (510)
15 PRK11288 araG L-arabinose tran 100.0 1.1E-72 2.3E-77 723.3 52.7 212 558-773 3-220 (501)
16 PRK10982 galactose/methyl gala 100.0 6.4E-72 1.4E-76 715.1 51.3 211 562-776 1-217 (491)
17 TIGR01257 rim_protein retinal- 100.0 1.7E-68 3.7E-73 735.7 76.8 561 263-888 1656-2253(2272)
18 PRK10938 putative molybdenum t 100.0 7.5E-71 1.6E-75 705.5 46.1 207 559-777 3-219 (490)
19 PTZ00265 multidrug resistance 100.0 4.5E-68 9.8E-73 739.0 68.6 221 1464-1696 1165-1457(1466)
20 COG4172 ABC-type uncharacteriz 100.0 1.3E-69 2.9E-74 618.2 42.7 223 558-780 5-245 (534)
21 PRK15064 ABC transporter ATP-b 100.0 2E-68 4.4E-73 688.4 56.8 207 1462-1694 317-527 (530)
22 COG1129 MglA ABC-type sugar tr 100.0 1.9E-68 4.1E-73 648.0 49.1 212 558-773 7-225 (500)
23 PRK11819 putative ABC transpor 100.0 1.2E-67 2.5E-72 683.4 56.7 208 1462-1692 322-533 (556)
24 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.2E-66 2.6E-71 674.0 56.2 208 1462-1692 320-531 (552)
25 PLN03130 ABC transporter C fam 100.0 2.5E-65 5.4E-70 718.0 71.3 215 1463-1693 1236-1462(1622)
26 PLN03232 ABC transporter C fam 100.0 4E-65 8.8E-70 717.1 69.6 217 1463-1695 1233-1461(1495)
27 COG3845 ABC-type uncharacteriz 100.0 4E-66 8.7E-71 611.9 45.7 211 558-772 3-219 (501)
28 PRK10636 putative ABC transpor 100.0 4.2E-66 9E-71 675.2 49.2 204 1462-1692 310-517 (638)
29 TIGR00957 MRP_assoc_pro multi 100.0 7.8E-64 1.7E-68 705.0 75.5 217 1463-1695 1283-1511(1522)
30 KOG0059 Lipid exporter ABCA1 a 100.0 9.4E-66 2E-70 689.8 42.8 566 284-887 298-878 (885)
31 PRK13409 putative ATPase RIL; 100.0 2.5E-65 5.4E-70 657.8 43.6 198 1463-1686 339-536 (590)
32 PRK11147 ABC transporter ATPas 100.0 1.2E-63 2.6E-68 654.0 57.2 206 1462-1690 317-526 (635)
33 PTZ00243 ABC transporter; Prov 100.0 1.4E-61 3E-66 679.7 73.7 215 1463-1693 1307-1534(1560)
34 TIGR01271 CFTR_protein cystic 100.0 2.3E-60 5E-65 667.6 82.2 215 1462-1693 1215-1441(1490)
35 COG0488 Uup ATPase components 100.0 1.2E-62 2.5E-67 615.5 44.0 206 1461-1693 318-526 (530)
36 PLN03073 ABC transporter F fam 100.0 3.6E-62 7.7E-67 638.3 50.5 204 1463-1692 507-714 (718)
37 KOG0054 Multidrug resistance-a 100.0 2.1E-60 4.6E-65 630.8 66.8 225 1455-1695 1129-1365(1381)
38 KOG0065 Pleiotropic drug resis 100.0 1.1E-54 2.4E-59 559.9 48.4 816 575-1689 127-1018(1391)
39 COG1126 GlnQ ABC-type polar am 100.0 1.6E-52 3.5E-57 449.0 25.0 220 559-782 2-225 (240)
40 COG4152 ABC-type uncharacteriz 100.0 2.2E-52 4.7E-57 451.8 25.7 297 1464-1798 2-298 (300)
41 COG4555 NatA ABC-type Na+ tran 100.0 3.4E-53 7.3E-58 446.4 18.6 225 1464-1695 1-225 (245)
42 COG1125 OpuBA ABC-type proline 100.0 4.8E-52 1E-56 452.1 22.5 221 559-783 1-226 (309)
43 COG1126 GlnQ ABC-type polar am 100.0 1.8E-51 3.9E-56 440.9 25.9 222 1464-1693 2-226 (240)
44 COG1131 CcmA ABC-type multidru 100.0 2.5E-50 5.5E-55 478.1 34.1 290 1464-1797 4-293 (293)
45 COG4555 NatA ABC-type Na+ tran 100.0 1.2E-51 2.6E-56 434.7 19.5 223 560-785 2-225 (245)
46 COG1125 OpuBA ABC-type proline 100.0 3.2E-51 6.8E-56 445.7 23.2 223 1464-1693 1-226 (309)
47 COG1135 AbcC ABC-type metal io 100.0 6.5E-51 1.4E-55 457.4 23.5 223 559-781 1-230 (339)
48 PRK13537 nodulation ABC transp 100.0 1.8E-49 3.9E-54 475.4 37.1 225 1463-1695 6-230 (306)
49 COG1135 AbcC ABC-type metal io 100.0 1.1E-50 2.4E-55 455.5 24.5 228 1464-1693 1-232 (339)
50 PRK13536 nodulation factor exp 100.0 2.1E-48 4.6E-53 470.5 37.3 228 1461-1696 38-265 (340)
51 COG1131 CcmA ABC-type multidru 100.0 1.3E-48 2.9E-53 463.3 34.3 229 559-790 4-234 (293)
52 PRK13537 nodulation ABC transp 100.0 4.4E-48 9.6E-53 463.5 39.1 230 558-791 6-236 (306)
53 COG4152 ABC-type uncharacteriz 100.0 7.1E-49 1.5E-53 424.6 28.3 294 559-886 2-297 (300)
54 KOG0927 Predicted transporter 100.0 7.6E-49 1.6E-53 464.7 26.1 204 1463-1691 388-595 (614)
55 PRK13536 nodulation factor exp 100.0 3.4E-47 7.4E-52 460.0 39.4 231 558-792 40-271 (340)
56 COG1127 Ttg2A ABC-type transpo 100.0 1.3E-48 2.9E-53 425.2 23.9 221 558-782 7-235 (263)
57 COG1127 Ttg2A ABC-type transpo 100.0 1.9E-48 4.2E-53 423.9 24.3 224 1462-1692 6-235 (263)
58 TIGR01188 drrA daunorubicin re 100.0 6.4E-47 1.4E-51 454.0 37.1 290 576-884 6-301 (302)
59 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-47 1.5E-51 453.2 36.5 223 1464-1695 2-224 (301)
60 TIGR03522 GldA_ABC_ATP gliding 100.0 1.5E-46 3.3E-51 450.2 39.2 297 560-883 3-300 (301)
61 TIGR01188 drrA daunorubicin re 100.0 1E-46 2.3E-51 452.2 34.6 213 1482-1696 5-217 (302)
62 TIGR01288 nodI ATP-binding ABC 100.0 2.4E-46 5.3E-51 449.2 37.6 225 1463-1695 3-227 (303)
63 COG1116 TauB ABC-type nitrate/ 100.0 2.8E-47 6.2E-52 422.7 23.1 203 559-769 3-207 (248)
64 TIGR01288 nodI ATP-binding ABC 100.0 1.4E-45 3.1E-50 442.5 38.8 231 558-792 3-234 (303)
65 COG3839 MalK ABC-type sugar tr 100.0 5.8E-47 1.3E-51 445.0 24.4 223 559-786 3-227 (338)
66 COG1137 YhbG ABC-type (unclass 100.0 9.8E-48 2.1E-52 404.8 15.3 223 1463-1693 3-229 (243)
67 COG3839 MalK ABC-type sugar tr 100.0 1.4E-46 3.1E-51 441.7 26.4 227 1463-1697 2-228 (338)
68 COG3842 PotA ABC-type spermidi 100.0 4.8E-47 1E-51 448.0 21.7 220 558-782 4-226 (352)
69 COG1137 YhbG ABC-type (unclass 100.0 2.5E-47 5.5E-52 401.7 15.5 220 559-782 4-228 (243)
70 COG1116 TauB ABC-type nitrate/ 100.0 2.4E-46 5.2E-51 415.3 23.6 206 1463-1679 2-207 (248)
71 COG3842 PotA ABC-type spermidi 100.0 1.6E-46 3.5E-51 443.5 23.1 223 1463-1693 4-227 (352)
72 TIGR00956 3a01205 Pleiotropic 100.0 4.7E-42 1E-46 479.0 71.8 446 319-777 487-988 (1394)
73 PLN03140 ABC transporter G fam 100.0 4.9E-41 1.1E-45 466.1 77.1 438 323-777 609-1105(1470)
74 TIGR02314 ABC_MetN D-methionin 100.0 2.2E-45 4.7E-50 443.2 29.2 222 560-781 2-229 (343)
75 COG1120 FepC ABC-type cobalami 100.0 7.1E-46 1.5E-50 420.6 23.3 221 1464-1691 2-227 (258)
76 COG1118 CysA ABC-type sulfate/ 100.0 3.8E-46 8.2E-51 417.6 20.7 225 559-788 2-233 (345)
77 TIGR02314 ABC_MetN D-methionin 100.0 3.2E-45 7E-50 441.7 30.3 226 1464-1692 1-230 (343)
78 COG1122 CbiO ABC-type cobalt t 100.0 1.8E-45 4E-50 418.5 25.0 222 559-783 3-229 (235)
79 COG3638 ABC-type phosphate/pho 100.0 1.8E-45 3.9E-50 399.7 22.8 224 1463-1692 2-237 (258)
80 COG4175 ProV ABC-type proline/ 100.0 5.9E-46 1.3E-50 415.1 19.5 231 558-788 3-260 (386)
81 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-45 3.2E-50 412.9 21.7 226 1464-1697 2-232 (345)
82 COG1120 FepC ABC-type cobalami 100.0 3.3E-45 7.1E-50 415.2 24.6 228 559-790 2-242 (258)
83 COG1117 PstB ABC-type phosphat 100.0 1.7E-45 3.6E-50 392.3 20.7 219 558-781 6-236 (253)
84 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.3E-45 7.2E-50 412.7 24.1 218 1463-1692 3-227 (254)
85 COG2884 FtsE Predicted ATPase 100.0 1.9E-45 4.2E-50 385.3 20.3 214 559-775 1-219 (223)
86 COG0411 LivG ABC-type branched 100.0 2.2E-45 4.8E-50 403.5 20.8 221 558-782 3-239 (250)
87 COG1124 DppF ABC-type dipeptid 100.0 5.1E-45 1.1E-49 400.0 23.6 226 1463-1693 2-232 (252)
88 COG3638 ABC-type phosphate/pho 100.0 4.5E-45 9.7E-50 396.6 22.7 221 558-781 2-236 (258)
89 COG1136 SalX ABC-type antimicr 100.0 9.9E-45 2.1E-49 403.6 25.9 211 560-771 2-220 (226)
90 COG1124 DppF ABC-type dipeptid 100.0 4.8E-45 1E-49 400.2 22.0 223 559-783 3-232 (252)
91 PRK11432 fbpC ferric transport 100.0 2.4E-44 5.3E-49 436.5 30.4 224 1462-1693 4-227 (351)
92 COG0411 LivG ABC-type branched 100.0 3.4E-45 7.4E-50 401.9 20.4 224 1463-1693 3-240 (250)
93 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-44 5.5E-49 437.2 30.1 223 1463-1693 3-225 (353)
94 COG1136 SalX ABC-type antimicr 100.0 2.2E-44 4.8E-49 400.8 27.1 214 1464-1681 1-220 (226)
95 COG2884 FtsE Predicted ATPase 100.0 4.7E-45 1E-49 382.3 20.2 216 1464-1686 1-220 (223)
96 KOG0062 ATPase component of AB 100.0 8.3E-45 1.8E-49 428.4 24.7 203 1462-1687 360-564 (582)
97 COG1122 CbiO ABC-type cobalt t 100.0 1.5E-44 3.2E-49 411.1 26.0 225 1463-1693 2-229 (235)
98 PRK11432 fbpC ferric transport 100.0 2.4E-44 5.2E-49 436.6 28.7 221 558-783 5-227 (351)
99 PRK11650 ugpC glycerol-3-phosp 100.0 3.4E-44 7.4E-49 436.5 30.1 223 1464-1693 3-225 (356)
100 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-44 5.4E-49 437.2 28.8 221 558-783 3-225 (353)
101 TIGR03258 PhnT 2-aminoethylpho 100.0 4.9E-44 1.1E-48 435.0 30.0 223 1464-1693 5-229 (362)
102 TIGR03258 PhnT 2-aminoethylpho 100.0 3.2E-44 6.9E-49 436.7 28.3 220 559-783 5-229 (362)
103 PRK11650 ugpC glycerol-3-phosp 100.0 5E-44 1.1E-48 435.1 28.4 221 559-783 3-225 (356)
104 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.1E-44 6.7E-49 404.8 23.7 215 558-780 3-225 (254)
105 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-43 2.4E-48 411.9 28.4 221 1465-1692 1-226 (235)
106 cd03265 ABC_DrrA DrrA is the A 100.0 1.1E-43 2.4E-48 407.8 27.8 219 1465-1690 1-219 (220)
107 COG4175 ProV ABC-type proline/ 100.0 1.7E-44 3.7E-49 403.5 20.0 232 1464-1696 4-258 (386)
108 cd03265 ABC_DrrA DrrA is the A 100.0 9.5E-44 2.1E-48 408.3 26.9 217 560-780 1-219 (220)
109 COG1117 PstB ABC-type phosphat 100.0 3.4E-44 7.4E-49 382.3 21.1 221 1463-1693 6-238 (253)
110 PRK11153 metN DL-methionine tr 100.0 1.5E-43 3.3E-48 430.6 29.9 227 1464-1693 1-231 (343)
111 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-43 2.4E-48 411.9 27.3 219 560-782 1-226 (235)
112 PRK11153 metN DL-methionine tr 100.0 1.2E-43 2.6E-48 431.4 28.8 224 560-783 2-231 (343)
113 COG4586 ABC-type uncharacteriz 100.0 3.8E-44 8.3E-49 394.0 21.7 241 1464-1705 3-259 (325)
114 PRK09452 potA putrescine/sperm 100.0 2E-43 4.3E-48 431.2 30.4 224 1462-1693 12-235 (375)
115 PRK09452 potA putrescine/sperm 100.0 1.6E-43 3.4E-48 432.0 28.7 221 558-783 13-235 (375)
116 PRK11607 potG putrescine trans 100.0 2.9E-43 6.2E-48 430.5 30.6 224 1462-1693 17-240 (377)
117 PRK10851 sulfate/thiosulfate t 100.0 2.8E-43 6E-48 428.1 29.4 222 1464-1693 2-227 (353)
118 cd03266 ABC_NatA_sodium_export 100.0 2.5E-43 5.4E-48 404.4 26.8 216 560-775 2-218 (218)
119 cd03263 ABC_subfamily_A The AB 100.0 2.6E-43 5.7E-48 404.8 26.7 219 560-780 1-219 (220)
120 PRK11607 potG putrescine trans 100.0 3E-43 6.6E-48 430.3 28.8 221 558-783 18-240 (377)
121 PRK10851 sulfate/thiosulfate t 100.0 2.7E-43 5.8E-48 428.2 28.2 220 559-783 2-227 (353)
122 PRK13637 cbiO cobalt transport 100.0 7.3E-43 1.6E-47 415.7 30.7 227 1464-1692 2-234 (287)
123 PRK11000 maltose/maltodextrin 100.0 5E-43 1.1E-47 429.2 30.0 222 1464-1693 3-224 (369)
124 PRK11000 maltose/maltodextrin 100.0 3.6E-43 7.8E-48 430.5 28.2 219 559-782 3-223 (369)
125 TIGR01186 proV glycine betaine 100.0 2.5E-43 5.3E-48 427.4 26.4 209 575-783 5-220 (363)
126 TIGR01186 proV glycine betaine 100.0 4.2E-43 9.2E-48 425.3 28.1 211 1482-1693 5-220 (363)
127 cd03259 ABC_Carb_Solutes_like 100.0 2.8E-43 6.1E-48 402.4 25.1 211 560-775 1-213 (213)
128 cd03259 ABC_Carb_Solutes_like 100.0 4.1E-43 8.8E-48 401.1 26.2 213 1465-1685 1-213 (213)
129 PRK13637 cbiO cobalt transport 100.0 8.3E-43 1.8E-47 415.2 29.1 224 559-782 2-234 (287)
130 TIGR00960 3a0501s02 Type II (G 100.0 4.9E-43 1.1E-47 401.4 25.6 210 560-771 2-216 (216)
131 PRK10070 glycine betaine trans 100.0 1.1E-42 2.4E-47 426.2 30.4 229 1464-1693 4-255 (400)
132 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-42 2.5E-47 426.3 30.3 227 1463-1697 2-239 (402)
133 cd03266 ABC_NatA_sodium_export 100.0 9.7E-43 2.1E-47 399.6 27.0 218 1464-1685 1-218 (218)
134 cd03258 ABC_MetN_methionine_tr 100.0 1E-42 2.2E-47 403.4 27.3 222 560-781 2-229 (233)
135 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-42 2.8E-47 403.9 28.1 221 1464-1692 2-226 (239)
136 PRK10070 glycine betaine trans 100.0 1.1E-42 2.5E-47 426.1 28.9 225 559-783 4-255 (400)
137 cd03258 ABC_MetN_methionine_tr 100.0 1.5E-42 3.1E-47 402.2 28.1 226 1464-1692 1-230 (233)
138 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-42 2.3E-47 398.6 26.4 212 1464-1681 1-216 (216)
139 PRK13651 cobalt transporter AT 100.0 1.4E-42 3E-47 415.2 28.3 223 559-781 2-253 (305)
140 cd03264 ABC_drug_resistance_li 100.0 1.1E-42 2.4E-47 396.9 26.3 211 560-775 1-211 (211)
141 cd03263 ABC_subfamily_A The AB 100.0 1.4E-42 3E-47 398.8 27.0 220 1465-1691 1-220 (220)
142 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.2E-42 4.7E-47 401.3 28.7 223 1464-1694 1-223 (236)
143 TIGR03415 ABC_choXWV_ATP choli 100.0 2.1E-42 4.5E-47 420.8 29.6 228 1465-1693 1-255 (382)
144 PRK13643 cbiO cobalt transport 100.0 2E-42 4.3E-47 412.1 28.8 221 560-781 2-232 (288)
145 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-42 3.7E-47 398.0 27.1 216 1465-1687 1-218 (220)
146 PRK09536 btuD corrinoid ABC tr 100.0 1.9E-42 4.2E-47 424.4 29.3 225 559-787 3-239 (402)
147 PRK13634 cbiO cobalt transport 100.0 2.6E-42 5.7E-47 411.5 29.7 225 1465-1692 3-235 (290)
148 PRK15079 oligopeptide ABC tran 100.0 2E-42 4.4E-47 417.4 28.9 226 558-783 7-252 (331)
149 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-42 3.3E-47 402.8 26.9 218 560-781 1-231 (236)
150 PRK13634 cbiO cobalt transport 100.0 2E-42 4.3E-47 412.6 28.4 221 560-781 3-234 (290)
151 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1E-42 2.3E-47 399.3 24.7 211 560-771 1-218 (218)
152 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-42 3.6E-47 403.1 26.6 219 559-782 2-226 (239)
153 cd03218 ABC_YhbG The ABC trans 100.0 1.8E-42 3.9E-47 401.2 26.8 217 560-780 1-220 (232)
154 cd03301 ABC_MalK_N The N-termi 100.0 1.9E-42 4.1E-47 395.7 26.6 213 1465-1685 1-213 (213)
155 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.7E-42 3.8E-47 397.9 26.2 213 560-776 1-217 (220)
156 PRK15079 oligopeptide ABC tran 100.0 4.4E-42 9.5E-47 414.6 30.7 231 1462-1693 6-252 (331)
157 TIGR03415 ABC_choXWV_ATP choli 100.0 2.1E-42 4.6E-47 420.7 28.0 210 574-783 35-255 (382)
158 PRK13631 cbiO cobalt transport 100.0 4.5E-42 9.7E-47 413.0 30.4 230 1459-1692 16-265 (320)
159 cd03301 ABC_MalK_N The N-termi 100.0 1.6E-42 3.5E-47 396.2 25.3 211 560-775 1-213 (213)
160 PRK13647 cbiO cobalt transport 100.0 3.7E-42 7.9E-47 407.2 29.1 221 1464-1691 4-226 (274)
161 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.6E-42 7.8E-47 399.5 28.4 221 560-785 2-224 (236)
162 PRK13643 cbiO cobalt transport 100.0 4.5E-42 9.7E-47 409.1 29.8 225 1464-1692 1-233 (288)
163 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.3E-42 5.1E-47 408.0 27.1 220 1466-1692 26-250 (269)
164 PRK13646 cbiO cobalt transport 100.0 3.4E-42 7.3E-47 410.1 28.6 222 559-781 2-234 (286)
165 cd03219 ABC_Mj1267_LivG_branch 100.0 3.2E-42 7E-47 400.1 27.5 220 1465-1692 1-232 (236)
166 cd03218 ABC_YhbG The ABC trans 100.0 3.3E-42 7.1E-47 399.0 27.4 219 1465-1691 1-221 (232)
167 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.3E-42 9.3E-47 400.4 28.5 222 1465-1692 1-225 (242)
168 cd03256 ABC_PhnC_transporter A 100.0 3.8E-42 8.2E-47 400.9 27.9 222 1465-1692 1-234 (241)
169 PRK13651 cobalt transporter AT 100.0 5.1E-42 1.1E-46 410.2 29.3 225 1464-1692 2-254 (305)
170 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.7E-42 8E-47 400.9 27.4 219 560-781 1-224 (242)
171 PRK13646 cbiO cobalt transport 100.0 5.7E-42 1.2E-46 408.1 29.5 226 1464-1692 2-235 (286)
172 cd03269 ABC_putative_ATPase Th 100.0 3.2E-42 6.8E-47 392.9 26.2 209 560-775 1-210 (210)
173 PRK13650 cbiO cobalt transport 100.0 5.3E-42 1.1E-46 406.9 29.1 225 1464-1693 4-230 (279)
174 TIGR00972 3a0107s01c2 phosphat 100.0 5.4E-42 1.2E-46 400.7 28.5 218 559-781 1-231 (247)
175 PRK11629 lolD lipoprotein tran 100.0 5.5E-42 1.2E-46 397.1 28.3 218 558-776 4-228 (233)
176 cd03260 ABC_PstB_phosphate_tra 100.0 2.2E-42 4.9E-47 399.0 24.9 215 560-779 1-226 (227)
177 PRK13647 cbiO cobalt transport 100.0 4.1E-42 8.8E-47 406.9 27.7 219 559-780 4-225 (274)
178 COG0410 LivF ABC-type branched 100.0 2.1E-42 4.5E-47 377.2 23.1 220 558-782 2-226 (237)
179 PRK11629 lolD lipoprotein tran 100.0 8.4E-42 1.8E-46 395.6 29.6 220 1463-1686 4-228 (233)
180 COG0410 LivF ABC-type branched 100.0 3.4E-42 7.3E-47 375.6 24.6 223 1463-1693 2-227 (237)
181 PRK13641 cbiO cobalt transport 100.0 6.3E-42 1.4E-46 407.9 29.1 222 559-781 2-233 (287)
182 PRK13652 cbiO cobalt transport 100.0 8.8E-42 1.9E-46 404.9 30.1 224 1463-1692 2-227 (277)
183 PRK13636 cbiO cobalt transport 100.0 7.8E-42 1.7E-46 406.3 29.7 224 1463-1692 4-231 (283)
184 PRK13631 cbiO cobalt transport 100.0 5.9E-42 1.3E-46 412.0 28.9 223 558-781 20-264 (320)
185 PRK13635 cbiO cobalt transport 100.0 7E-42 1.5E-46 405.6 29.1 224 1463-1692 4-229 (279)
186 PLN03211 ABC transporter G-25; 100.0 2.4E-39 5.2E-44 422.2 55.5 217 561-784 70-298 (659)
187 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.6E-42 5.7E-47 407.6 25.0 218 561-782 26-250 (269)
188 PRK09493 glnQ glutamine ABC tr 100.0 8.2E-42 1.8E-46 397.6 28.7 221 1464-1692 1-225 (240)
189 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.3E-42 7.1E-47 395.2 25.0 213 1465-1681 1-218 (218)
190 cd03256 ABC_PhnC_transporter A 100.0 4.5E-42 9.8E-47 400.2 26.4 219 560-781 1-233 (241)
191 PRK09493 glnQ glutamine ABC tr 100.0 7.4E-42 1.6E-46 398.0 28.0 218 560-781 2-224 (240)
192 PRK11831 putative ABC transpor 100.0 9.3E-42 2E-46 403.2 29.2 223 1463-1692 6-233 (269)
193 PRK13650 cbiO cobalt transport 100.0 6E-42 1.3E-46 406.5 27.6 221 559-781 4-228 (279)
194 PRK13641 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 405.9 29.8 225 1464-1692 2-234 (287)
195 TIGR00955 3a01204 The Eye Pigm 100.0 1.1E-39 2.4E-44 426.2 51.5 210 574-785 36-259 (617)
196 cd03268 ABC_BcrA_bacitracin_re 100.0 4.7E-42 1E-46 391.0 25.5 207 560-775 1-208 (208)
197 cd03260 ABC_PstB_phosphate_tra 100.0 5.7E-42 1.2E-46 395.6 26.1 215 1465-1689 1-226 (227)
198 TIGR02673 FtsE cell division A 100.0 5E-42 1.1E-46 392.5 25.3 208 560-770 2-214 (214)
199 PRK11308 dppF dipeptide transp 100.0 1.1E-41 2.4E-46 410.7 29.1 227 558-784 4-246 (327)
200 cd03264 ABC_drug_resistance_li 100.0 8.6E-42 1.9E-46 389.7 26.1 211 1465-1685 1-211 (211)
201 PRK13633 cobalt transporter AT 100.0 1.4E-41 3E-46 403.8 28.9 228 1463-1693 3-234 (280)
202 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-41 2.8E-46 396.6 28.1 219 559-781 2-230 (242)
203 TIGR02315 ABC_phnC phosphonate 100.0 8E-42 1.7E-46 398.6 26.3 222 1464-1691 1-234 (243)
204 PRK11308 dppF dipeptide transp 100.0 2.4E-41 5.1E-46 408.0 30.9 230 1463-1693 4-245 (327)
205 PRK13636 cbiO cobalt transport 100.0 1.4E-41 3.1E-46 404.1 28.5 222 558-782 4-231 (283)
206 PRK11831 putative ABC transpor 100.0 1.5E-41 3.2E-46 401.5 28.4 221 558-782 6-233 (269)
207 cd03269 ABC_putative_ATPase Th 100.0 1.1E-41 2.4E-46 388.4 26.5 210 1465-1685 1-210 (210)
208 TIGR00972 3a0107s01c2 phosphat 100.0 2E-41 4.3E-46 396.0 29.0 219 1464-1692 1-232 (247)
209 cd03292 ABC_FtsE_transporter F 100.0 9.2E-42 2E-46 390.3 25.6 209 560-771 1-214 (214)
210 cd03224 ABC_TM1139_LivF_branch 100.0 9.5E-42 2.1E-46 392.5 25.8 216 560-781 1-220 (222)
211 cd03268 ABC_BcrA_bacitracin_re 100.0 9.7E-42 2.1E-46 388.3 25.4 208 1465-1685 1-208 (208)
212 PRK11264 putative amino-acid A 100.0 1.6E-41 3.6E-46 397.6 28.1 219 559-781 3-232 (250)
213 PRK13635 cbiO cobalt transport 100.0 1.5E-41 3.2E-46 402.8 28.0 222 558-782 4-229 (279)
214 PRK13644 cbiO cobalt transport 100.0 1.9E-41 4E-46 401.2 28.5 221 1464-1692 1-224 (274)
215 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-41 3E-46 391.2 26.6 218 1465-1692 1-221 (222)
216 PRK13548 hmuV hemin importer A 100.0 2.2E-41 4.8E-46 397.5 28.8 222 1464-1692 2-230 (258)
217 TIGR02673 FtsE cell division A 100.0 1.3E-41 2.8E-46 389.1 26.1 210 1464-1680 1-214 (214)
218 PRK14268 phosphate ABC transpo 100.0 2.1E-41 4.5E-46 398.1 28.6 220 558-782 11-242 (258)
219 PRK13652 cbiO cobalt transport 100.0 2.1E-41 4.5E-46 401.7 28.7 221 559-782 3-227 (277)
220 PRK10908 cell division protein 100.0 1.5E-41 3.3E-46 390.6 26.7 210 560-772 2-216 (222)
221 PRK11264 putative amino-acid A 100.0 2.6E-41 5.6E-46 395.9 29.0 221 1464-1692 3-233 (250)
222 PRK11248 tauB taurine transpor 100.0 2E-41 4.4E-46 396.7 28.1 214 1464-1688 1-216 (255)
223 PRK13644 cbiO cobalt transport 100.0 1.8E-41 3.9E-46 401.3 27.6 218 560-781 2-223 (274)
224 PRK13632 cbiO cobalt transport 100.0 2.6E-41 5.5E-46 399.9 28.5 224 1463-1692 6-231 (271)
225 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-41 2.6E-46 397.1 25.2 218 560-780 2-233 (243)
226 cd03226 ABC_cobalt_CbiO_domain 100.0 9.2E-42 2E-46 387.5 23.3 203 561-772 1-205 (205)
227 PRK10619 histidine/lysine/argi 100.0 3.4E-41 7.4E-46 396.2 28.9 221 558-782 4-241 (257)
228 PRK10908 cell division protein 100.0 2.9E-41 6.3E-46 388.3 27.7 213 1464-1683 1-217 (222)
229 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-41 4.3E-46 389.5 26.2 212 560-772 2-220 (221)
230 PRK13638 cbiO cobalt transport 100.0 3E-41 6.6E-46 399.4 28.4 221 1464-1692 1-225 (271)
231 PRK10895 lipopolysaccharide AB 100.0 2.1E-41 4.6E-46 394.4 26.6 219 559-781 3-225 (241)
232 cd03225 ABC_cobalt_CbiO_domain 100.0 1.3E-41 2.8E-46 388.3 24.2 208 561-770 1-211 (211)
233 PRK11022 dppD dipeptide transp 100.0 2.5E-41 5.5E-46 408.0 27.9 228 559-786 3-247 (326)
234 TIGR03411 urea_trans_UrtD urea 100.0 3.8E-41 8.1E-46 392.6 28.4 219 1464-1691 2-230 (242)
235 cd03225 ABC_cobalt_CbiO_domain 100.0 1.9E-41 4.1E-46 386.9 25.2 208 1467-1680 2-211 (211)
236 PRK10895 lipopolysaccharide AB 100.0 2.8E-41 6E-46 393.4 27.1 221 1464-1692 3-226 (241)
237 PRK11022 dppD dipeptide transp 100.0 3.9E-41 8.4E-46 406.3 29.1 227 1464-1693 3-244 (326)
238 TIGR02211 LolD_lipo_ex lipopro 100.0 3.4E-41 7.4E-46 387.6 27.2 215 1464-1682 1-220 (221)
239 PRK13638 cbiO cobalt transport 100.0 3E-41 6.5E-46 399.5 27.4 218 560-781 2-224 (271)
240 PRK09473 oppD oligopeptide tra 100.0 4.5E-41 9.8E-46 406.0 29.2 231 558-788 11-257 (330)
241 PRK13633 cobalt transporter AT 100.0 3.2E-41 6.9E-46 400.7 27.5 224 558-783 3-234 (280)
242 cd03262 ABC_HisP_GlnQ_permease 100.0 2.2E-41 4.7E-46 387.0 25.1 208 560-771 1-213 (213)
243 PRK11248 tauB taurine transpor 100.0 3.3E-41 7.2E-46 394.9 27.1 210 560-777 2-215 (255)
244 PRK13640 cbiO cobalt transport 100.0 4.9E-41 1.1E-45 399.3 29.0 225 1462-1692 3-232 (282)
245 PRK13639 cbiO cobalt transport 100.0 5.5E-41 1.2E-45 397.6 29.3 222 1464-1692 1-226 (275)
246 PRK14242 phosphate transporter 100.0 4.6E-41 1E-45 394.4 28.4 219 558-781 5-236 (253)
247 PRK11124 artP arginine transpo 100.0 4E-41 8.6E-46 392.3 27.6 218 559-780 2-228 (242)
248 PRK10619 histidine/lysine/argi 100.0 6.6E-41 1.4E-45 393.8 29.7 222 1463-1692 4-241 (257)
249 PRK10584 putative ABC transpor 100.0 5.8E-41 1.3E-45 387.5 28.7 218 1463-1684 5-227 (228)
250 PRK13649 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 399.6 28.7 222 559-781 2-233 (280)
251 PRK14273 phosphate ABC transpo 100.0 4.7E-41 1E-45 394.5 28.0 220 558-782 6-238 (254)
252 PRK14267 phosphate ABC transpo 100.0 5.3E-41 1.2E-45 393.9 28.2 221 558-782 3-237 (253)
253 PRK14247 phosphate ABC transpo 100.0 5.6E-41 1.2E-45 393.0 28.3 219 559-781 3-233 (250)
254 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-41 7.9E-46 389.3 26.2 216 560-775 2-228 (228)
255 cd03267 ABC_NatA_like Similar 100.0 3.5E-41 7.6E-46 390.8 26.0 204 1481-1685 32-236 (236)
256 PRK13548 hmuV hemin importer A 100.0 5.4E-41 1.2E-45 394.2 27.9 219 559-781 2-229 (258)
257 PRK10575 iron-hydroxamate tran 100.0 5E-41 1.1E-45 396.3 27.7 223 1462-1691 9-236 (265)
258 PRK14268 phosphate ABC transpo 100.0 8.9E-41 1.9E-45 392.8 29.4 221 1462-1692 10-242 (258)
259 PRK09473 oppD oligopeptide tra 100.0 1.1E-40 2.3E-45 402.8 30.8 229 1462-1693 10-252 (330)
260 PRK11300 livG leucine/isoleuci 100.0 6.9E-41 1.5E-45 393.5 28.3 223 1463-1692 4-243 (255)
261 cd03292 ABC_FtsE_transporter F 100.0 5E-41 1.1E-45 384.3 26.3 210 1465-1681 1-214 (214)
262 cd03226 ABC_cobalt_CbiO_domain 100.0 3.3E-41 7.1E-46 383.0 24.5 204 1466-1682 1-205 (205)
263 PRK13648 cbiO cobalt transport 100.0 8.8E-41 1.9E-45 395.0 29.0 224 1463-1692 6-231 (269)
264 PRK15112 antimicrobial peptide 100.0 9.4E-41 2E-45 394.2 28.9 229 1463-1692 3-239 (267)
265 cd03257 ABC_NikE_OppD_transpor 100.0 7.2E-41 1.6E-45 386.8 27.2 219 1464-1685 1-228 (228)
266 PRK11247 ssuB aliphatic sulfon 100.0 6.7E-41 1.5E-45 391.7 27.2 210 1462-1688 10-219 (257)
267 cd03267 ABC_NatA_like Similar 100.0 3.8E-41 8.2E-46 390.5 24.8 201 575-775 33-236 (236)
268 PRK10584 putative ABC transpor 100.0 7.3E-41 1.6E-45 386.6 27.1 215 558-773 5-226 (228)
269 PRK11614 livF leucine/isoleuci 100.0 6.5E-41 1.4E-45 389.3 26.9 220 1463-1692 4-226 (237)
270 PRK11124 artP arginine transpo 100.0 9.9E-41 2.1E-45 389.0 28.5 220 1464-1691 2-229 (242)
271 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-41 1.4E-45 387.7 26.4 217 1465-1691 1-220 (230)
272 PRK13649 cbiO cobalt transport 100.0 1.2E-40 2.7E-45 396.3 29.6 225 1464-1692 2-234 (280)
273 cd03262 ABC_HisP_GlnQ_permease 100.0 5.6E-41 1.2E-45 383.6 25.6 209 1465-1681 1-213 (213)
274 PRK13639 cbiO cobalt transport 100.0 9.3E-41 2E-45 395.7 28.3 219 560-781 2-225 (275)
275 PRK13645 cbiO cobalt transport 100.0 8.5E-41 1.8E-45 399.1 28.0 222 559-781 6-239 (289)
276 cd03299 ABC_ModC_like Archeal 100.0 9.2E-41 2E-45 387.2 27.4 217 560-782 1-219 (235)
277 PRK11300 livG leucine/isoleuci 100.0 8.8E-41 1.9E-45 392.6 27.6 220 558-781 4-242 (255)
278 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-40 2.6E-45 390.6 28.6 221 1465-1692 1-236 (252)
279 PRK11614 livF leucine/isoleuci 100.0 7.1E-41 1.5E-45 389.0 26.4 218 558-781 4-225 (237)
280 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-41 3.2E-46 352.6 18.3 215 560-782 2-219 (231)
281 PRK14235 phosphate transporter 100.0 1.4E-40 2.9E-45 392.8 29.0 219 558-781 18-250 (267)
282 TIGR03005 ectoine_ehuA ectoine 100.0 8.6E-41 1.9E-45 391.8 27.1 219 560-782 1-236 (252)
283 PRK13632 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 395.2 27.2 221 558-781 6-230 (271)
284 PRK13642 cbiO cobalt transport 100.0 1.7E-40 3.6E-45 394.0 29.4 225 1464-1693 4-230 (277)
285 TIGR02769 nickel_nikE nickel i 100.0 1.5E-40 3.4E-45 392.1 28.8 228 1464-1692 2-240 (265)
286 cd03300 ABC_PotA_N PotA is an 100.0 1.1E-40 2.3E-45 386.0 26.9 218 560-782 1-220 (232)
287 cd03299 ABC_ModC_like Archeal 100.0 1.7E-40 3.8E-45 384.9 28.7 219 1465-1692 1-219 (235)
288 PRK14241 phosphate transporter 100.0 1.5E-40 3.3E-45 390.9 28.6 219 559-781 4-241 (258)
289 PRK10253 iron-enterobactin tra 100.0 1.1E-40 2.4E-45 393.3 27.4 223 1462-1691 5-232 (265)
290 PRK14267 phosphate ABC transpo 100.0 1.7E-40 3.8E-45 389.5 29.0 221 1463-1692 3-237 (253)
291 PRK14274 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 391.2 28.5 220 558-782 11-243 (259)
292 PRK13648 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 393.9 27.8 221 558-781 6-230 (269)
293 TIGR02769 nickel_nikE nickel i 100.0 1.3E-40 2.8E-45 392.8 27.9 224 559-782 2-240 (265)
294 TIGR03410 urea_trans_UrtE urea 100.0 7.3E-41 1.6E-45 387.2 25.3 214 560-780 1-219 (230)
295 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.3E-41 1.8E-45 381.5 25.4 211 1465-1685 1-211 (211)
296 PRK15112 antimicrobial peptide 100.0 1.1E-40 2.3E-45 393.7 27.1 225 558-782 3-239 (267)
297 cd03298 ABC_ThiQ_thiamine_tran 100.0 6E-41 1.3E-45 382.7 24.1 209 560-775 1-211 (211)
298 PRK14250 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 387.3 27.3 217 1464-1692 3-221 (241)
299 PRK13645 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 396.4 28.9 226 1464-1692 6-240 (289)
300 cd03235 ABC_Metallic_Cations A 100.0 4.2E-41 9.1E-46 384.5 22.6 205 562-775 2-213 (213)
301 PRK14242 phosphate transporter 100.0 2.2E-40 4.8E-45 388.6 29.3 221 1462-1692 4-237 (253)
302 COG4525 TauB ABC-type taurine 100.0 4.1E-41 8.8E-46 352.3 20.4 222 559-787 3-228 (259)
303 PRK10744 pstB phosphate transp 100.0 1.6E-40 3.4E-45 391.1 28.0 220 558-782 12-244 (260)
304 PRK14247 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 388.1 29.0 220 1464-1692 3-234 (250)
305 PRK15093 antimicrobial peptide 100.0 2E-40 4.3E-45 401.6 29.6 228 1463-1693 2-249 (330)
306 PRK10771 thiQ thiamine transpo 100.0 1.4E-40 3.1E-45 385.1 27.2 219 1464-1692 1-219 (232)
307 PRK10575 iron-hydroxamate tran 100.0 1E-40 2.2E-45 393.6 26.4 220 558-781 10-236 (265)
308 cd03300 ABC_PotA_N PotA is an 100.0 2E-40 4.2E-45 383.8 28.2 220 1465-1692 1-220 (232)
309 COG0444 DppD ABC-type dipeptid 100.0 8.5E-41 1.9E-45 383.2 24.7 230 560-789 2-250 (316)
310 PRK14269 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 387.7 27.8 219 559-782 2-230 (246)
311 COG3840 ThiQ ABC-type thiamine 100.0 3.8E-41 8.2E-46 349.5 19.5 219 1464-1693 1-220 (231)
312 PRK13640 cbiO cobalt transport 100.0 1.6E-40 3.4E-45 394.9 27.7 221 558-781 4-231 (282)
313 PRK13642 cbiO cobalt transport 100.0 1.6E-40 3.5E-45 394.1 27.5 222 559-782 4-229 (277)
314 PRK14256 phosphate ABC transpo 100.0 2E-40 4.4E-45 388.6 28.0 220 559-782 4-236 (252)
315 PRK15093 antimicrobial peptide 100.0 1.6E-40 3.5E-45 402.3 28.0 225 559-783 3-249 (330)
316 PRK11144 modC molybdate transp 100.0 1.6E-40 3.6E-45 405.4 28.0 214 1464-1693 1-219 (352)
317 PRK14270 phosphate ABC transpo 100.0 2.5E-40 5.4E-45 387.6 28.3 219 558-781 3-234 (251)
318 TIGR00968 3a0106s01 sulfate AB 100.0 1.7E-40 3.7E-45 385.4 26.6 218 560-782 1-220 (237)
319 PRK11231 fecE iron-dicitrate t 100.0 2.1E-40 4.5E-45 389.2 27.5 220 1464-1691 2-226 (255)
320 PRK14273 phosphate ABC transpo 100.0 2.9E-40 6.2E-45 387.8 28.7 220 1463-1692 6-238 (254)
321 COG4586 ABC-type uncharacteriz 100.0 6.5E-41 1.4E-45 368.6 21.6 237 559-795 3-259 (325)
322 COG1245 Predicted ATPase, RNas 100.0 4.1E-40 8.8E-45 381.9 29.2 189 1464-1677 342-530 (591)
323 TIGR01978 sufC FeS assembly AT 100.0 1.7E-40 3.8E-45 387.4 26.6 225 560-788 1-240 (243)
324 TIGR00968 3a0106s01 sulfate AB 100.0 2.8E-40 6E-45 383.6 28.0 220 1465-1692 1-220 (237)
325 PRK14235 phosphate transporter 100.0 4.1E-40 8.9E-45 388.7 29.8 222 1461-1692 16-251 (267)
326 PRK11247 ssuB aliphatic sulfon 100.0 1.5E-40 3.3E-45 388.7 25.9 206 558-777 11-218 (257)
327 COG4598 HisP ABC-type histidin 100.0 1.5E-41 3.2E-46 350.2 15.2 220 558-781 5-240 (256)
328 TIGR03873 F420-0_ABC_ATP propo 100.0 2.3E-40 4.9E-45 389.0 27.4 219 1465-1691 2-225 (256)
329 PRK14250 phosphate ABC transpo 100.0 1.5E-40 3.3E-45 386.9 25.6 215 559-782 3-221 (241)
330 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-40 4E-45 389.7 26.6 217 560-780 2-224 (256)
331 TIGR01277 thiQ thiamine ABC tr 100.0 2.5E-40 5.5E-45 378.0 26.9 212 1465-1686 1-212 (213)
332 PRK09984 phosphonate/organopho 100.0 2.5E-40 5.5E-45 389.9 27.6 221 1463-1690 3-240 (262)
333 PRK11231 fecE iron-dicitrate t 100.0 1.7E-40 3.7E-45 389.8 26.0 218 559-780 2-225 (255)
334 cd03235 ABC_Metallic_Cations A 100.0 8.5E-41 1.8E-45 382.0 22.7 206 1467-1685 2-213 (213)
335 PRK14240 phosphate transporter 100.0 3.5E-40 7.7E-45 386.3 28.5 218 559-781 3-233 (250)
336 PRK14259 phosphate ABC transpo 100.0 2.5E-40 5.4E-45 390.8 27.4 218 558-781 12-252 (269)
337 TIGR02142 modC_ABC molybdenum 100.0 2.4E-40 5.1E-45 404.7 27.9 215 1469-1694 4-223 (354)
338 PRK10253 iron-enterobactin tra 100.0 2E-40 4.4E-45 391.1 26.3 220 558-781 6-232 (265)
339 PRK14245 phosphate ABC transpo 100.0 4.2E-40 9.2E-45 385.5 28.8 220 558-782 2-234 (250)
340 PRK11144 modC molybdate transp 100.0 2E-40 4.4E-45 404.6 26.8 211 560-783 2-219 (352)
341 KOG0058 Peptide exporter, ABC 100.0 3.9E-41 8.4E-46 415.7 20.4 222 558-786 464-695 (716)
342 PRK10744 pstB phosphate transp 100.0 5.5E-40 1.2E-44 386.5 29.2 221 1462-1692 11-244 (260)
343 PRK14274 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 386.4 29.2 221 1462-1692 10-243 (259)
344 TIGR02142 modC_ABC molybdenum 100.0 2.3E-40 4.9E-45 404.8 26.8 214 564-785 4-224 (354)
345 PRK14239 phosphate transporter 100.0 5.3E-40 1.1E-44 385.3 28.6 220 558-782 4-236 (252)
346 TIGR03740 galliderm_ABC gallid 100.0 3.1E-40 6.7E-45 380.0 25.9 208 560-778 1-209 (223)
347 PRK10771 thiQ thiamine transpo 100.0 3.1E-40 6.8E-45 382.2 26.0 216 560-782 2-219 (232)
348 PRK14262 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 384.5 28.4 219 559-782 3-234 (250)
349 cd03297 ABC_ModC_molybdenum_tr 100.0 4.1E-40 8.8E-45 376.6 26.3 205 1469-1685 5-214 (214)
350 PRK14256 phosphate ABC transpo 100.0 8.7E-40 1.9E-44 383.3 29.5 221 1463-1692 3-236 (252)
351 TIGR01277 thiQ thiamine ABC tr 100.0 3.4E-40 7.4E-45 376.9 25.3 210 560-776 1-212 (213)
352 PRK14248 phosphate ABC transpo 100.0 7E-40 1.5E-44 387.4 28.8 220 558-782 20-252 (268)
353 PRK09984 phosphonate/organopho 100.0 3.7E-40 8.1E-45 388.5 26.4 219 558-780 3-240 (262)
354 COG0444 DppD ABC-type dipeptid 100.0 3.7E-40 8E-45 378.0 25.4 232 1464-1698 1-249 (316)
355 PRK14241 phosphate transporter 100.0 7.8E-40 1.7E-44 384.9 28.9 220 1464-1692 4-242 (258)
356 PRK11701 phnK phosphonate C-P 100.0 9.4E-40 2E-44 384.2 29.5 223 1463-1692 5-241 (258)
357 PRK14251 phosphate ABC transpo 100.0 6.5E-40 1.4E-44 384.3 27.8 219 559-782 4-235 (251)
358 PRK14270 phosphate ABC transpo 100.0 9.1E-40 2E-44 382.9 29.1 221 1462-1692 2-235 (251)
359 PRK14259 phosphate ABC transpo 100.0 7.5E-40 1.6E-44 386.7 28.3 220 1462-1692 11-253 (269)
360 PRK14269 phosphate ABC transpo 100.0 8.5E-40 1.8E-44 381.9 28.4 219 1464-1692 2-230 (246)
361 TIGR03740 galliderm_ABC gallid 100.0 6.1E-40 1.3E-44 377.6 26.6 210 1465-1689 1-210 (223)
362 cd03297 ABC_ModC_molybdenum_tr 100.0 4.7E-40 1E-44 376.1 25.0 203 564-775 5-214 (214)
363 PRK14237 phosphate transporter 100.0 1.1E-39 2.3E-44 385.2 28.8 220 558-782 19-251 (267)
364 PRK14249 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 382.3 28.4 220 558-782 3-235 (251)
365 PRK14246 phosphate ABC transpo 100.0 9.3E-40 2E-44 383.2 27.9 221 558-782 9-241 (257)
366 PRK14275 phosphate ABC transpo 100.0 9.8E-40 2.1E-44 388.7 28.4 220 558-782 38-270 (286)
367 PRK14248 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 384.1 30.1 222 1461-1692 18-252 (268)
368 PRK14254 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 387.4 28.9 219 557-781 37-268 (285)
369 TIGR01978 sufC FeS assembly AT 100.0 9.9E-40 2.1E-44 381.0 27.5 219 1465-1691 1-233 (243)
370 PRK14272 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 382.3 28.2 220 559-782 4-236 (252)
371 PRK14261 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 382.8 27.7 220 558-782 5-237 (253)
372 PRK14239 phosphate transporter 100.0 1.6E-39 3.5E-44 381.2 29.1 220 1463-1692 4-236 (252)
373 PRK14245 phosphate ABC transpo 100.0 1.6E-39 3.6E-44 380.5 29.1 220 1463-1692 2-234 (250)
374 PRK14253 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 381.4 27.6 218 559-781 3-232 (249)
375 COG1123 ATPase components of v 100.0 4.9E-40 1.1E-44 402.4 25.1 230 557-786 278-523 (539)
376 PRK14236 phosphate transporter 100.0 1.7E-39 3.7E-44 384.5 29.0 219 558-781 24-255 (272)
377 PRK11701 phnK phosphonate C-P 100.0 1.4E-39 3E-44 382.8 28.0 221 558-782 5-241 (258)
378 PRK14260 phosphate ABC transpo 100.0 1.4E-39 3E-44 382.9 27.9 219 558-781 6-242 (259)
379 PRK13547 hmuV hemin importer A 100.0 1.1E-39 2.3E-44 384.7 26.9 221 1464-1691 1-243 (272)
380 PRK14240 phosphate transporter 100.0 2.1E-39 4.6E-44 379.7 29.2 219 1464-1692 3-234 (250)
381 cd03234 ABCG_White The White s 100.0 9.2E-40 2E-44 376.8 25.7 215 559-775 3-226 (226)
382 PRK14244 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 380.8 27.5 218 560-782 6-237 (251)
383 PRK14238 phosphate transporter 100.0 1.7E-39 3.7E-44 384.1 27.7 220 558-782 23-255 (271)
384 COG4674 Uncharacterized ABC-ty 100.0 2.6E-40 5.7E-45 346.7 18.1 222 558-783 4-236 (249)
385 PRK14262 phosphate ABC transpo 100.0 2.8E-39 6.1E-44 378.6 29.1 219 1464-1692 3-234 (250)
386 PRK14275 phosphate ABC transpo 100.0 2.6E-39 5.6E-44 385.1 29.0 222 1461-1692 36-270 (286)
387 PRK10418 nikD nickel transport 100.0 2.5E-39 5.5E-44 379.6 28.3 218 1464-1692 4-230 (254)
388 PRK14254 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 383.8 29.5 221 1461-1692 36-269 (285)
389 cd03252 ABCC_Hemolysin The ABC 100.0 6.1E-40 1.3E-44 381.2 22.6 219 560-784 1-227 (237)
390 COG4598 HisP ABC-type histidin 100.0 1.6E-40 3.5E-45 342.6 15.6 222 1463-1692 5-241 (256)
391 PRK14258 phosphate ABC transpo 100.0 3.8E-39 8.3E-44 379.4 29.4 222 1463-1692 6-245 (261)
392 PRK14237 phosphate transporter 100.0 4.2E-39 9.2E-44 380.1 29.7 221 1462-1692 18-251 (267)
393 PRK14251 phosphate ABC transpo 100.0 3.4E-39 7.4E-44 378.2 28.8 220 1463-1692 3-235 (251)
394 TIGR02982 heterocyst_DevA ABC 100.0 1.8E-39 3.9E-44 372.8 25.8 211 560-771 2-219 (220)
395 PRK14271 phosphate ABC transpo 100.0 3.5E-39 7.5E-44 382.0 28.9 220 558-782 20-251 (276)
396 PRK14257 phosphate ABC transpo 100.0 3.3E-39 7.2E-44 389.3 29.0 222 558-782 79-313 (329)
397 COG4161 ArtP ABC-type arginine 100.0 5.7E-40 1.2E-44 332.6 18.5 216 559-778 2-226 (242)
398 PRK14272 phosphate ABC transpo 100.0 4.4E-39 9.6E-44 377.5 29.0 220 1464-1692 4-236 (252)
399 TIGR02770 nickel_nikD nickel i 100.0 2.1E-39 4.5E-44 374.8 25.6 206 1485-1692 1-215 (230)
400 TIGR03608 L_ocin_972_ABC putat 100.0 1.3E-39 2.9E-44 370.3 23.7 200 562-766 1-206 (206)
401 PRK14243 phosphate transporter 100.0 2.3E-39 5.1E-44 381.7 26.5 219 558-782 9-248 (264)
402 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-39 2.8E-44 377.9 23.9 220 560-785 1-228 (234)
403 COG4181 Predicted ABC-type tra 100.0 5.7E-40 1.2E-44 336.9 18.4 214 559-773 6-226 (228)
404 PRK10419 nikE nickel transport 100.0 4.1E-39 9E-44 380.2 28.5 228 1464-1692 3-241 (268)
405 cd03234 ABCG_White The White s 100.0 2.7E-39 5.8E-44 372.9 26.3 216 1464-1685 3-226 (226)
406 PRK00349 uvrA excinuclease ABC 100.0 2.6E-38 5.6E-43 418.2 39.1 128 1557-1693 791-928 (943)
407 PRK14236 phosphate transporter 100.0 6.2E-39 1.3E-43 379.7 30.0 221 1462-1692 23-256 (272)
408 PRK14255 phosphate ABC transpo 100.0 4.2E-39 9.2E-44 377.6 28.2 220 558-782 4-236 (252)
409 PRK14253 phosphate ABC transpo 100.0 4.5E-39 9.7E-44 376.7 28.3 219 1464-1692 3-233 (249)
410 TIGR02982 heterocyst_DevA ABC 100.0 3.4E-39 7.4E-44 370.5 26.8 214 1464-1681 1-219 (220)
411 PRK14238 phosphate transporter 100.0 4.6E-39 9.9E-44 380.5 28.6 223 1460-1692 20-255 (271)
412 TIGR02323 CP_lyasePhnK phospho 100.0 4.7E-39 1E-43 377.5 28.5 223 1463-1692 2-238 (253)
413 PRK13547 hmuV hemin importer A 100.0 2.2E-39 4.7E-44 382.1 25.7 217 560-780 2-242 (272)
414 PRK14249 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 376.1 29.1 221 1463-1693 3-236 (251)
415 PRK10762 D-ribose transporter 100.0 1.6E-39 3.5E-44 417.1 26.5 220 1463-1690 3-228 (501)
416 PRK10261 glutathione transport 100.0 2.8E-39 6.1E-44 423.0 29.2 225 558-782 312-553 (623)
417 PRK14261 phosphate ABC transpo 100.0 5.4E-39 1.2E-43 376.8 28.6 220 1463-1692 5-237 (253)
418 COG4181 Predicted ABC-type tra 100.0 1.1E-39 2.4E-44 334.8 19.6 216 1464-1683 6-226 (228)
419 PRK14258 phosphate ABC transpo 100.0 5.8E-39 1.3E-43 377.9 28.7 219 559-782 7-245 (261)
420 cd03233 ABC_PDR_domain1 The pl 100.0 4E-39 8.6E-44 364.5 26.1 197 1464-1685 3-202 (202)
421 TIGR02770 nickel_nikD nickel i 100.0 2.3E-39 5E-44 374.4 24.5 204 578-782 1-215 (230)
422 PRK14260 phosphate ABC transpo 100.0 6.1E-39 1.3E-43 377.4 28.5 220 1463-1692 6-243 (259)
423 TIGR01184 ntrCD nitrate transp 100.0 2.2E-39 4.7E-44 374.3 24.1 200 1486-1690 1-202 (230)
424 PRK14246 phosphate ABC transpo 100.0 7.2E-39 1.6E-43 375.6 28.4 223 1462-1693 8-242 (257)
425 PRK14265 phosphate ABC transpo 100.0 6.7E-39 1.5E-43 379.4 28.3 219 558-782 19-258 (274)
426 PRK13538 cytochrome c biogenes 100.0 2.7E-39 5.8E-44 366.9 23.8 200 560-766 2-202 (204)
427 PRK14271 phosphate ABC transpo 100.0 9.2E-39 2E-43 378.4 29.4 220 1463-1692 20-251 (276)
428 PRK10418 nikD nickel transport 100.0 5E-39 1.1E-43 377.1 26.9 216 559-782 4-230 (254)
429 PRK14263 phosphate ABC transpo 100.0 7.4E-39 1.6E-43 376.4 28.3 219 558-782 7-245 (261)
430 PRK14257 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 384.8 30.3 225 1460-1692 76-313 (329)
431 cd03254 ABCC_Glucan_exporter_l 100.0 2.6E-39 5.6E-44 374.0 23.9 220 559-785 2-229 (229)
432 PRK10247 putative ABC transpor 100.0 3.5E-39 7.5E-44 371.5 24.6 214 1462-1686 5-221 (225)
433 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-39 5E-44 376.4 23.2 219 1465-1694 1-227 (237)
434 PRK14244 phosphate ABC transpo 100.0 8.2E-39 1.8E-43 374.8 27.7 218 1465-1692 6-237 (251)
435 PRK13549 xylose transporter AT 100.0 3.5E-39 7.6E-44 414.5 26.9 220 1463-1690 4-230 (506)
436 cd03251 ABCC_MsbA MsbA is an e 100.0 3.6E-39 7.8E-44 374.1 24.4 220 1465-1695 1-228 (234)
437 PRK14255 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 373.5 29.2 221 1462-1692 3-236 (252)
438 PRK09700 D-allose transporter 100.0 3.8E-39 8.3E-44 414.8 27.0 220 1463-1690 4-232 (510)
439 TIGR03608 L_ocin_972_ABC putat 100.0 4E-39 8.8E-44 366.3 24.1 201 1467-1676 1-206 (206)
440 PRK14243 phosphate transporter 100.0 8.5E-39 1.9E-43 376.9 27.6 219 1463-1692 9-248 (264)
441 TIGR02323 CP_lyasePhnK phospho 100.0 9.3E-39 2E-43 374.9 27.6 221 558-782 2-238 (253)
442 PRK10419 nikE nickel transport 100.0 8.4E-39 1.8E-43 377.6 27.2 223 559-781 3-240 (268)
443 COG4525 TauB ABC-type taurine 100.0 3E-39 6.4E-44 338.3 20.6 216 1464-1688 3-220 (259)
444 PRK14266 phosphate ABC transpo 100.0 9.9E-39 2.1E-43 374.0 27.5 219 559-782 3-234 (250)
445 PRK13538 cytochrome c biogenes 100.0 5.2E-39 1.1E-43 364.6 24.4 202 1464-1676 1-202 (204)
446 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-39 6.4E-44 375.7 22.9 220 560-784 1-228 (238)
447 PRK14252 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 376.1 28.4 220 558-782 15-249 (265)
448 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.8E-39 1.3E-43 369.1 24.7 201 560-775 23-224 (224)
449 COG2274 SunT ABC-type bacterio 100.0 1.3E-39 2.7E-44 420.6 21.4 218 558-785 470-699 (709)
450 PRK15439 autoinducer 2 ABC tra 100.0 7.1E-39 1.5E-43 411.4 28.1 217 1463-1691 10-228 (510)
451 TIGR01184 ntrCD nitrate transp 100.0 3.7E-39 8E-44 372.4 23.0 195 579-777 1-199 (230)
452 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.4E-39 9.6E-44 378.7 23.6 212 560-783 3-226 (275)
453 PRK14265 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 375.9 28.8 221 1461-1692 17-258 (274)
454 PRK14263 phosphate ABC transpo 100.0 2.1E-38 4.5E-43 372.6 29.2 219 1463-1692 7-245 (261)
455 PRK13546 teichoic acids export 100.0 1.7E-38 3.7E-43 372.6 28.4 216 558-785 3-235 (264)
456 CHL00131 ycf16 sulfate ABC tra 100.0 1.6E-38 3.5E-43 372.8 28.1 219 558-780 6-239 (252)
457 PRK13543 cytochrome c biogenes 100.0 9.2E-39 2E-43 365.2 25.0 202 558-768 10-212 (214)
458 cd03233 ABC_PDR_domain1 The pl 100.0 8.3E-39 1.8E-43 361.9 24.1 194 559-775 3-202 (202)
459 PRK10247 putative ABC transpor 100.0 7.9E-39 1.7E-43 368.6 23.9 211 558-776 6-221 (225)
460 cd03245 ABCC_bacteriocin_expor 100.0 5.1E-39 1.1E-43 369.3 22.2 206 560-775 3-220 (220)
461 PRK14264 phosphate ABC transpo 100.0 2.3E-38 5E-43 380.1 28.5 220 558-782 44-289 (305)
462 KOG0066 eIF2-interacting prote 100.0 3.4E-38 7.3E-43 360.1 28.0 192 1463-1681 585-779 (807)
463 COG4559 ABC-type hemin transpo 100.0 7.6E-39 1.7E-43 340.5 21.1 226 560-789 2-243 (259)
464 PRK13543 cytochrome c biogenes 100.0 2E-38 4.4E-43 362.3 26.3 204 1462-1678 9-212 (214)
465 COG4604 CeuD ABC-type enteroch 100.0 4.8E-40 1E-44 345.2 11.5 218 560-781 2-224 (252)
466 COG4988 CydD ABC-type transpor 100.0 2.9E-39 6.2E-44 393.3 20.1 219 559-788 320-549 (559)
467 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.9E-38 4E-43 364.9 25.8 202 1465-1685 23-224 (224)
468 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.1E-38 2.3E-43 375.5 24.0 212 1465-1693 3-226 (275)
469 PRK15056 manganese/iron transp 100.0 1.8E-38 4E-43 375.7 26.1 219 1463-1691 5-229 (272)
470 PRK03695 vitamin B12-transport 100.0 1.3E-38 2.8E-43 372.0 24.4 212 1466-1691 2-221 (248)
471 cd03254 ABCC_Glucan_exporter_l 100.0 1.3E-38 2.9E-43 368.1 24.3 218 1465-1694 3-228 (229)
472 COG4559 ABC-type hemin transpo 100.0 8.1E-39 1.8E-43 340.3 20.2 221 1464-1692 1-230 (259)
473 PRK03695 vitamin B12-transport 100.0 1.1E-38 2.4E-43 372.5 23.4 210 561-780 2-220 (248)
474 PRK14266 phosphate ABC transpo 100.0 3.9E-38 8.4E-43 369.0 28.1 220 1464-1693 3-235 (250)
475 CHL00131 ycf16 sulfate ABC tra 100.0 4.3E-38 9.2E-43 369.2 28.2 220 1463-1690 6-239 (252)
476 PRK13546 teichoic acids export 100.0 6.2E-38 1.3E-42 367.9 29.3 220 1463-1696 3-236 (264)
477 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.6E-38 3.6E-43 369.5 24.1 220 1465-1694 1-228 (238)
478 TIGR03269 met_CoM_red_A2 methy 100.0 1.8E-38 3.9E-43 409.5 27.0 223 1465-1694 1-260 (520)
479 KOG0055 Multidrug/pheromone ex 100.0 3.8E-39 8.3E-44 418.4 20.7 224 559-791 987-1222(1228)
480 PRK15134 microcin C ABC transp 100.0 3.2E-38 6.9E-43 407.7 29.2 227 1463-1692 4-246 (529)
481 PRK14252 phosphate ABC transpo 100.0 6E-38 1.3E-42 370.2 29.1 221 1462-1692 14-249 (265)
482 cd03245 ABCC_bacteriocin_expor 100.0 1.4E-38 3E-43 365.7 22.8 206 1465-1685 3-220 (220)
483 PRK15056 manganese/iron transp 100.0 2.3E-38 5.1E-43 374.8 25.1 216 559-780 6-228 (272)
484 TIGR02324 CP_lyasePhnL phospho 100.0 3.7E-38 8E-43 363.2 25.6 211 1464-1676 1-222 (224)
485 TIGR02324 CP_lyasePhnL phospho 100.0 3.4E-38 7.5E-43 363.4 25.3 208 560-767 2-223 (224)
486 PRK11288 araG L-arabinose tran 100.0 3.3E-38 7.2E-43 405.0 27.5 217 1463-1687 3-224 (501)
487 cd03231 ABC_CcmA_heme_exporter 100.0 1.9E-38 4.1E-43 359.0 22.1 197 560-766 1-198 (201)
488 PRK09544 znuC high-affinity zi 100.0 4E-38 8.7E-43 367.6 25.5 204 1463-1691 3-208 (251)
489 cd03253 ABCC_ATM1_transporter 100.0 3.1E-38 6.8E-43 366.7 24.5 216 560-782 1-224 (236)
490 COG1129 MglA ABC-type sugar tr 100.0 2.7E-38 5.8E-43 385.1 24.8 217 1462-1686 6-228 (500)
491 PRK14264 phosphate ABC transpo 100.0 1.1E-37 2.3E-42 374.4 29.5 222 1461-1692 42-289 (305)
492 cd03244 ABCC_MRP_domain2 Domai 100.0 1.8E-38 4E-43 364.9 22.0 206 560-776 3-220 (221)
493 PRK13545 tagH teichoic acids e 100.0 8.9E-38 1.9E-42 384.3 29.4 217 1462-1695 19-235 (549)
494 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-38 2.8E-43 367.5 20.6 209 558-771 10-226 (226)
495 COG2274 SunT ABC-type bacterio 100.0 1.2E-36 2.6E-41 393.1 41.2 223 1463-1696 470-700 (709)
496 PRK13545 tagH teichoic acids e 100.0 7.3E-38 1.6E-42 385.1 28.0 214 558-784 20-234 (549)
497 COG4161 ArtP ABC-type arginine 100.0 1.8E-38 4E-43 321.7 18.5 219 1464-1690 2-228 (242)
498 COG4604 CeuD ABC-type enteroch 100.0 2.1E-39 4.5E-44 340.4 12.0 222 1464-1692 1-225 (252)
499 TIGR02633 xylG D-xylose ABC tr 100.0 4.3E-38 9.2E-43 404.4 26.8 219 1464-1690 1-228 (500)
500 PRK00635 excinuclease ABC subu 100.0 1E-36 2.2E-41 415.8 41.5 204 1485-1692 610-906 (1809)
No 1
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.3e-210 Score=2134.26 Aligned_cols=1544 Identities=33% Similarity=0.539 Sum_probs=1168.9
Q ss_pred ceeEEcCChHHHHHHHHhccCCCccccccCCCCceEEEEEEecC------CCCeeEEEEEecCcccccCCCccccccc--
Q 000224 113 LVSRIYKDELELETYIRSDLYGTCSQVKDCLNPKIKGAVVFHDQ------GPELFDYSIRLNHTWAFSGFPDVKTIMD-- 184 (1833)
Q Consensus 113 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~vvF~~~------~~~~~~Y~ir~~~~~~~~~~~~~~~~~~-- 184 (1833)
+..++++||++|++.-..... +.+++|||+|++. .|..++|+||+|.+. .|+++...+
T Consensus 523 d~~~~~~~~~~~~~~~~~l~~----------~~~~~agI~F~~~~~~~~~~p~~v~y~IR~~~~~----~~~t~~~~~~~ 588 (2272)
T TIGR01257 523 DKFESYDDEVQLTQRALSLLE----------ENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDV----VEKTNKIKDRY 588 (2272)
T ss_pred cceecCCCHHHHHHHHHHHhh----------cCCeEEEEEeCCCcccccCCCCceEEEEecCccc----cCcchhhcccc
Confidence 446789999999876544321 3468999999764 257899999999752 222221111
Q ss_pred -CCCCCCcccccCCCCcCCccchhhhhhHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCCccccCCCccccCCcce
Q 000224 185 -TNGPYLNDLELGVNIIPTMQYSFSGFLTLQQVLDSFIIFAAQQTGANVATENVEIPPSNLSGTHLSLKQPWTLYSPSNI 263 (1833)
Q Consensus 185 -~~~~~~~~~~~g~~~~~~~~Y~~~gFl~lQ~~id~aii~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (1833)
..||+.... .+.+|+.+||++||++||+||++...+. . ....+
T Consensus 589 w~~g~~~~~~-------~~~~Y~~~GFl~lQ~ai~~aii~~~~~~----~-------------------------~~~~v 632 (2272)
T TIGR01257 589 WDSGPRADPV-------EDFRYIWGGFAYLQDMVEQGITRSQMQA----E-------------------------PPVGI 632 (2272)
T ss_pred ccCCCCCCcc-------ccccHHHhhHHHHHHHHHHHHHHhhcCC----C-------------------------cccce
Confidence 134443211 1247999999999999999999743211 0 01246
Q ss_pred eeeccCCCcccchHHHHHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHhHHHHHHHcCCCchHHHHHHHHHHHHHHHHHH
Q 000224 264 RMVPFPTREYTDDEFQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQFAVSS 343 (1833)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~iv~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~~i~~ 343 (1833)
.+++||+|+|.+|.|...+..++|++++++|+|+++.+++.||.|||+|+||+|+||||++++||+|||+.+++..++++
T Consensus 633 ~~q~~P~P~y~~d~~l~~~~~~~pl~~~la~~~~~~~lv~~iV~EKE~rlKE~MkiMGL~~~~~w~sWfi~~~~~~~i~~ 712 (2272)
T TIGR01257 633 YLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSI 712 (2272)
T ss_pred eeeeCCCCCeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHH-HhcccccccChhhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhhhhcc--cCCCchhHHhH
Q 000224 344 GIITAC-TMDSLFKYSDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLGAFFPYYTV--NDEAVPMVLKV 420 (1833)
Q Consensus 344 ~i~~~~-~~~~~f~~s~~~~~f~~~~l~~~s~i~~~f~iS~fF~~~~~a~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~ 420 (1833)
++++++ ....+|++||++++|+++++|++++|+||||+|+||+|+++|+++++++||++++|+++. .....+...++
T Consensus 713 ~l~~~il~~~~~~~~s~~~~lfl~~~~y~~s~I~~~fliS~fFska~~A~~~~~li~f~~~lp~~~~~~~~~~~~~~~~~ 792 (2272)
T TIGR01257 713 FLLTIFIMHGRILHYSDPFILFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTADLKT 792 (2272)
T ss_pred HHHHHHHhhCceeecCChHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcccccCHHHHH
Confidence 776654 356799999999999999999999999999999999999999999999999999998632 33445667899
Q ss_pred HHhhhchhHHHHHHHHHHHHhhccCCccccccccCC---CCchHHHHHHHHHHHHHHHHHHHHHHhccccCCCCcccccc
Q 000224 421 IASLLSPTAFALGSVNFADYERAHVGLRWSNMWRAS---SGVNFLVCLLMMLLDTLLYGVIGLYLDKVLPKENGVRYRWN 497 (1833)
Q Consensus 421 ~~sl~~~~a~~~~~~~~~~~e~~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~~ly~~l~~yld~v~p~~~G~~~p~~ 497 (1833)
++||+||+||++|+..++.+|.++.|++|+|++..+ ++++++.+++||++|+++|++|+||+|+|+|++||+++|||
T Consensus 793 ~~sL~sp~af~~g~~~i~~~e~~~~G~~w~n~~~~~~~~d~~s~~~~~~ml~~d~~lY~lL~~Yld~V~PgeyG~~kpw~ 872 (2272)
T TIGR01257 793 AVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGNSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWY 872 (2272)
T ss_pred HHHhcCHHHHHHHHHHHHHHhhhCCCcccccccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCcc
Confidence 999999999999999999999999999999998643 45789999999999999999999999999999999999999
Q ss_pred ccccccccCccccccccccchhHHhhhhhhhhhhhhhccc-cCcchhhhhhhhccccccCcceEEEEeeEEEecCCCCcc
Q 000224 498 FIFQNCFRRKKSVIKHHVSSAEVKINKKLSKEKECAFALD-ACEPVVEAISLDMKQQEVDGRCIQIRKLHKVYATKRGNC 576 (1833)
Q Consensus 498 f~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~i~i~~l~k~y~~~~~~~ 576 (1833)
|||+++||+++........ ......+...++.......+ ..+..+|+. ..+ ....|+++||+|.|++ +++
T Consensus 873 F~~~~syW~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-----~~~-~~~~L~I~nLsK~y~~--~~k 943 (2272)
T TIGR01257 873 FLLQESYWLGGEGCSTREE-RALEKTEPLTEEMEDPEHPEGINDSFFERE-----LPG-LVPGVCVKNLVKIFEP--SGR 943 (2272)
T ss_pred cccchhhhcCCcccccccc-cccccccccccccccccccccccccccccc-----cCC-CCceEEEEeEEEEecC--CCc
Confidence 9999999976532110000 00000000000000000000 000011111 111 1257999999999953 235
Q ss_pred cceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEEEccCCCCCCCCCHHHH
Q 000224 577 CAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREH 656 (1833)
Q Consensus 577 ~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~ 656 (1833)
.||+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++..+..++|+.+|+|||++.+++.+||+||
T Consensus 944 ~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~ 1023 (2272)
T TIGR01257 944 PAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLTVAEH 1023 (2272)
T ss_pred eEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCCHHHH
Confidence 69999999999999999999999999999999999999999999999999977777788999999999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHH
Q 000224 657 LEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQL 736 (1833)
Q Consensus 657 l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~ 736 (1833)
+.++++++|.+.++.+++++++++.+||.++.++++++|||||||||+|||||+++|+||||||||+||||.+|+.+|++
T Consensus 1024 L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~l 1103 (2272)
T TIGR01257 1024 ILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDL 1103 (2272)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH
Confidence 99999999887777788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecCC-------------------
Q 000224 737 IKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAP------------------- 797 (1833)
Q Consensus 737 l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~~------------------- 797 (1833)
|+++++|+|||++||++++++.+||||++|++|+++|.|++.+||++||.||++++.+...
T Consensus 1104 L~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1183 (2272)
T TIGR01257 1104 LLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGTCSCTSKG 1183 (2272)
T ss_pred HHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcEEEEEEecccccccccccccccccccccc
Confidence 9999889999999999999999999999999999999999999999999999999976430
Q ss_pred --------------------ChhhHHHHHHHhCCCceEEeeeCcEEEEEecCCCc--chHHHHHHHHHHhhhhccccccc
Q 000224 798 --------------------DASAAADIVYRHIPSALCVSEVGTEITFKLPLASS--SSFESMFREIESCIRKSVSKVEA 855 (1833)
Q Consensus 798 --------------------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~le~~~~~~~~~~~~ 855 (1833)
+.+.+.+++++++|++.+.++.+.+++|.+|.+.. ..|+.+|++||+..
T Consensus 1184 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~iP~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~--------- 1254 (2272)
T TIGR01257 1184 FSTRCPARVDEITPEQVLDGDVNELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETL--------- 1254 (2272)
T ss_pred cccccccccccccccccccccHHHHHHHHHHhCCCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhH---------
Confidence 23456778899999999999999999999999875 46999999999753
Q ss_pred cccccccCCCeeEEEecCCChHHHHHHHhcCCCcchh----hhhhccccccccc-c-ccccCCCCccccccc-cccCCcc
Q 000224 856 DATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESE----CISQRNNLVTLDY-V-SAESDDQAPKRISNC-KLFGNYK 928 (1833)
Q Consensus 856 ~~~~~~~~~~i~~~~~s~~tlE~vfl~~~~~~~~~~~----~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~-~~~~~~~ 928 (1833)
+++||.+|++|.|||||||||++++...+.. ............. . ......+.+...... .......
T Consensus 1255 ------~~lgi~sygis~tTLEeVFlkv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1328 (2272)
T TIGR01257 1255 ------ADLGLSSFGISDTPLEEIFLKVTEDADSGSLFAGGAQQKRENANLRHPCSGPTEKAGQTPQASHTCSPGQPAAH 1328 (2272)
T ss_pred ------hhCCCceEEeecCCHHHHHHHhhhhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999875432110 0000000000000 0 000000000000000 0000000
Q ss_pred cccceeeeeecchhhhhhHHhhhhhhhhcccccccccccchhHHHHHHHHHHHHHhHhccchhHHHHHHHHHHHHHHHHH
Q 000224 929 WVFGFIVTVVQRACTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFLLVGL 1008 (1833)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~al~~Kr~~~~~R~~~~~~~~l~lP~~~~~~~l 1008 (1833)
........ ..........+..+++||++||++||+++++|||+.+++|+++|++++++++
T Consensus 1329 -------~~~~~~~~-------------~~~~~~~~~tg~~L~~qQf~All~KR~~~~~Rd~k~~~~qillPi~fv~lal 1388 (2272)
T TIGR01257 1329 -------PEGQPPPE-------------PEDPGVPLNTGARLILQHVQALLVKRFQHTIRSHKDFLAQIVLPATFVFLAL 1388 (2272)
T ss_pred -------cccccccc-------------ccccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 00000000 0000011234677899999999999999999999999999999999999999
Q ss_pred HHHhccCC-CCCCccccccccCCCccCCC-CC--------------------CCCc---------ccccCchh-----hh
Q 000224 1009 LFLKLKPH-PDMLSVTFTTSNFNPLLSGG-GG--------------------GGPI---------PFDLSWPI-----AN 1052 (1833)
Q Consensus 1009 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~-~~--------------------~~~~---------~~~~~~~~-----~~ 1052 (1833)
++....+. .+.|++.++++.|....... .. +... +.....+. ..
T Consensus 1389 ~~~~~~~~~~~~p~l~Ls~~~Y~~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1468 (2272)
T TIGR01257 1389 MLSIIIPPFGEYPALTLHPWMYGQQYTFFSMDEPNSEHLEVLADVLLNKPGFGNRCLKEEWLPEYPCGNSTPWKTPSVSP 1468 (2272)
T ss_pred HHHhhcccccCCCCeecchhhccCcceeccccccccccccchhhhhhcccccccccccccccccccccccccccccchhH
Confidence 88876543 45677888877663221100 00 0000 00000000 00
Q ss_pred hhhhhhc-CCcccccccCCCCCCCh--HHHHHHHHHh-cCCC---C---------cchhhchhHHHHHhhhhcc------
Q 000224 1053 EVSKYIQ-GGWIQRFKQSSYRFPNA--EKALADAVDA-AGPT---L---------GPVLLSMSEYLMSSFNESY------ 1110 (1833)
Q Consensus 1053 ~~~~~~~-~~~~~~~~~~~~~~~~~--~~~l~~~~~~-~~~~---~---------~~~~~~~~~~l~~~~~~~~------ 1110 (1833)
.+...+. ..|..........+... .....++... .+.. . .....++++|+...++...
T Consensus 1469 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~n~sdyll~~~~~~~~~~~~~ 1548 (2272)
T TIGR01257 1469 NITHLFQKQKWTAAHPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTDRNISDFLVKTYPALIRSSLKS 1548 (2272)
T ss_pred HHHHHHhhccccccccccccccccccccccccccccccccCCCcccccccchhhhhhcccchHHHHhhhhhhhhcccccc
Confidence 0000000 00000000000000000 0000000000 0000 0 0011245666654433211
Q ss_pred -----cceecEEEeecc------------------------------------------CCCCceeEEEEeCCCCCChHH
Q 000224 1111 -----QSRYGAIVMDDQ------------------------------------------NDDGSLGFTVLHNSSCQHAGP 1143 (1833)
Q Consensus 1111 -----~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~n~~~~hs~p 1143 (1833)
..|||++..+.. +.++...+++|||++++|++|
T Consensus 1549 ~~~~~~~ry~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwfNn~~~Hs~p 1628 (2272)
T TIGR01257 1549 KFWVNEQRYGGISIGGKLPAIPITGEALVGFLSDLGQMMNVSGGPVTREASKEMPDFLKHLETEDNIKVWFNNKGWHALV 1628 (2272)
T ss_pred ccccccccccccccccccccccccchhhhhhhhhcccccccccccccccccchhhhhhhccccCcceEEEEcCCcccHHH
Confidence 134443321100 001123468999999999999
Q ss_pred HHHHHHHHHHHHHhcCC----CcceEEEEeecCCCchhhhhhh---cchhhhHHHHHHHHHHHHHhhHhHHHHHHHHHHh
Q 000224 1144 TFINVMNTAILRLATGN----RNMTIRTRNHPLPTTQSQQLQR---HDLDAFSVSIIISIAFSFIPASFAVAIVKEREVK 1216 (1833)
Q Consensus 1144 ~~ln~~~nailr~~~~~----~~~~I~~~~~Plp~~~~~~~~~---~~~~~~~~~~~i~~~~s~i~a~f~~~~V~ER~~k 1216 (1833)
.++|+++||++|...++ .+.+|++.|||+|.+..+.... ........++++.++|+|+|++|++++|+||++|
T Consensus 1629 ~~lN~l~NaiLr~~~~~~~~~~~~~I~v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~asfv~~~V~ER~sk 1708 (2272)
T TIGR01257 1629 SFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNK 1708 (2272)
T ss_pred HHHHHHHHHHHHHhcccccCCccceEEEEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHheeeehHHhhh
Confidence 99999999999997542 3578999999999876442211 1223445678899999999999999999999999
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHHHHHHhhhhhccCc
Q 000224 1217 AKQQQLISGVSVLSYWTSTYIWDFISFLFPSSCAIILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCLTFFFSDH 1296 (1833)
Q Consensus 1217 ~k~lq~vsGv~~~~YW~s~~l~D~i~~li~~~~~iii~~~f~~~~~~~~~~~~~~~ll~llyG~a~i~~~Yl~Sf~f~~~ 1296 (1833)
+||+|++||+++.+||+++|+||++.|+++++++++++++|+.+.|.+...++.+++++++||+|++|++|++||+|+++
T Consensus 1709 aK~lQ~vSGv~~~~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~~~~~l~~~~lll~lyG~a~ip~tYl~SflF~~~ 1788 (2272)
T TIGR01257 1709 AKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDVP 1788 (2272)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHhhhcccchhhhhHHHHHHHhhhc------ccCCCCCC
Q 000224 1297 TMAQNVVLLVHFFTGLILMVISFIMGLLEA---TRSANSLLKNFFRLSPGFCFADGLASLALLRQG------MKDKTSDG 1367 (1833)
Q Consensus 1297 ~~a~~~~~~i~~~~g~~~~i~~~il~~~~~---~~~~~~~l~~~f~l~P~~~l~~gl~~l~~~~~~------~~~~~~~~ 1367 (1833)
.+|+..+.++++++|++.+++.+++..... ....+..++++|+++|.||++.|+..+...... .......+
T Consensus 1789 ~~A~~~~~~in~~~G~~~~i~~~il~~~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~~~~~~~~~~~~~~~~ 1868 (2272)
T TIGR01257 1789 STAYVALSCANLFIGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEHSAN 1868 (2272)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHHHHHHHHhhcccccCC
Confidence 999999999999999999988888876532 344577889999999999999999988754311 11122346
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhccCcchhhhhHhhhhccccccccCCCCCCCcccccCCCCCCcCCCCCChh
Q 000224 1368 VFDWNVTSASICYLGCESICYFLLTLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDTLDLNEDID 1447 (1833)
Q Consensus 1368 ~~~~~~~g~~i~~l~~~~i~~~lL~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed~d 1447 (1833)
+++|+..|..++||++++++|+++++++|+.... .+ |... . .+ ....+||+|
T Consensus 1869 ~~~~~~~g~~ll~m~~~~iv~flLl~~ie~~~~~-------~~-~~~~--------~---~~---------~~~~~eD~D 1920 (2272)
T TIGR01257 1869 PFQWDLIGKNLVAMAVEGVVYFLLTLLIQHHFFL-------SR-WIAE--------P---AK---------EPIFDEDDD 1920 (2272)
T ss_pred ccchhhccHHHHHHHHHHHHHHHHHHHHHhhhhh-------hh-hccc--------c---Cc---------CcCCCchhH
Confidence 7899999999999999999999999999963210 00 1000 0 00 001268999
Q ss_pred hHHHHhhcccCCCCcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEE
Q 000224 1448 VQVERNRVLSGSVDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTA 1527 (1833)
Q Consensus 1448 V~~E~~rv~~~~~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i 1527 (1833)
|.+||.||.+....+.+|+++||+|+|+++ ++.||+|+||+|++|||+||+||||||||||+|||+|+++|++|+|
T Consensus 1921 V~~Er~rV~~~~~~~~~L~v~nLsK~Y~~~----~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I 1996 (2272)
T TIGR01257 1921 VAEERQRIISGGNKTDILRLNELTKVYSGT----SSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1996 (2272)
T ss_pred HHHHHHHHhccCCCCceEEEEEEEEEECCC----CceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEE
Confidence 999999998766667799999999999631 3569999999999999999999999999999999999999999999
Q ss_pred EEcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHH
Q 000224 1528 FIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1528 ~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~k 1607 (1833)
+++|+++.....+.+++||||||++.+++.+|++||+.++++++|.++++.++.++++++.++|.+++++++++||||||
T Consensus 1997 ~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqK 2076 (2272)
T TIGR01257 1997 TVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNK 2076 (2272)
T ss_pred EECCEECcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHH
Confidence 99999997655567788999999999999999999999999999988776777888999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
|||+||+||+++|+||||||||+||||.+|+.+|+.|+++++ +| +|||+|||+|+|++++||||++|++|+++|.|++
T Consensus 2077 qRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~-~g-~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~ 2154 (2272)
T TIGR01257 2077 RKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIR-EG-RAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTI 2154 (2272)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999864 44 6899999999999999999999999999999999
Q ss_pred hHHHhhcCCeEEEEEeecCCccc---cHHHHHHHHHhhcccCCcchhhhhhhhhhhhccccccccCCCceeeecch----
Q 000224 1688 QHLKTRFGNFLELEVKPTEVSSV---DLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLS---- 1760 (1833)
Q Consensus 1688 ~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 1760 (1833)
++++++++.+|.++++....... +.+.+..++...+.... ..+. ........+.
T Consensus 2155 q~Lk~~~g~g~~l~i~~~~~~~~~~~~~~~v~~~i~~~fp~a~-----~~e~--------------~~~~l~~~i~~~~~ 2215 (2272)
T TIGR01257 2155 QHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSV-----QRER--------------HYNMLQFQVSSSSL 2215 (2272)
T ss_pred HHHHHHhCCceEEEEEEcCcchhhhhHHHHHHHHHhhcCccce-----eecc--------------ccceEEEEeCcccH
Confidence 99999999999888875432211 12223333333221110 0000 0001111111
Q ss_pred HHHHHHHHHhhccccceeEeEecCCChhhHHHHhhcccccccCC
Q 000224 1761 QEMLLIVGRWLGNEERIKTLISSSSSPDRIFGEQLSEQLVRDGT 1804 (1833)
Q Consensus 1761 ~~~~~~~~~~~~~~~~~~~~~~~~~sl~~vf~~~t~~~~~~~~~ 1804 (1833)
.+.+..+.+ ...+..|.++.+.++||||||+++++++-.+++.
T Consensus 2216 ~~if~~L~~-~k~~l~I~dysvsqtSLE~VFl~l~~~q~~~~~~ 2258 (2272)
T TIGR01257 2216 ARIFQLLIS-HKDSLLIEEYSVTQTTLDQVFVNFAKQQTETYDL 2258 (2272)
T ss_pred HHHHHHHHh-cCCCCCeEEEEcCCCCHHHHHHHHhccccccCCC
Confidence 222222222 1135678999999999999999999998775533
No 2
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.1e-83 Score=862.85 Aligned_cols=856 Identities=34% Similarity=0.525 Sum_probs=609.0
Q ss_pred HHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecCCChhhHHHHHHHhCCCceEEe
Q 000224 738 KKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPDASAAADIVYRHIPSALCVS 817 (1833)
Q Consensus 738 ~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 817 (1833)
++.|+||||++ +|||++|.+|+++ ++.+||+++|.||+++++. .....+.+++|++++..
T Consensus 2 ~~~k~~R~i~~-----------~Dri~i~s~g~l~---s~~~lk~~~g~gy~l~l~~------~~~~~~~~~~p~~~~~~ 61 (885)
T KOG0059|consen 2 ERRKEGRTIIL-----------GDRIVIMSHGKLK---SSLFLKRKLGSGYHLTLVL------QVTLFIQQHIPDARLVE 61 (885)
T ss_pred cccccCCEEEE-----------ecceeheeCCeec---cchHHHHhhCCCceEEeHH------HHHHHHHhhCccceecc
Confidence 45678999999 9999999999999 9999999999999999977 56778899999998887
Q ss_pred eeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCChHHHHHHHhcCCCcchhhhhhc
Q 000224 818 EVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESECISQR 897 (1833)
Q Consensus 818 ~~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tlE~vfl~~~~~~~~~~~~~~~~ 897 (1833)
.. +..+.+|......+ .+..+ .++.+|+++.||+||||+++.++.....+
T Consensus 62 ~~--~~~~~lp~~~~~~~--~~~~l---------------------~~~~~~~~~~t~l~~vfl~~~~~~~~~~~----- 111 (885)
T KOG0059|consen 62 CP--KLVYLLPLKYRREF--LFRGL---------------------DLIASFGVSLTTLEEVFLKLGGESDSLEN----- 111 (885)
T ss_pred cc--cccccCChhccccc--hhhhh---------------------hcccccccccccHHHHHhhcccccccccc-----
Confidence 76 88888887665433 11111 11788999999999999999764321111
Q ss_pred cccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHhhhhhhhhcccccccccccchhHHHHHHH
Q 000224 898 NNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKA 977 (1833)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~a 977 (1833)
+. ..++ ..+...+.+|+.+
T Consensus 112 ------~~----~~~~---------------------------------------------------~~~~~~~~~~~~~ 130 (885)
T KOG0059|consen 112 ------DS----TEDQ---------------------------------------------------VSGPAKAYTQFQA 130 (885)
T ss_pred ------cc----cccc---------------------------------------------------cchhHHhhhhHHH
Confidence 00 0000 0145677899999
Q ss_pred HHHHHHhHhccchhHHHHHHHHHHHHHHHHHHHHhccCCCCCCccccccccCCCccCCCCCCCCcccccCchhhhhhhhh
Q 000224 978 LFIKRAVSARRDRKTIVFQLLIPAIFLLVGLLFLKLKPHPDMLSVTFTTSNFNPLLSGGGGGGPIPFDLSWPIANEVSKY 1057 (1833)
Q Consensus 978 l~~Kr~~~~~R~~~~~~~~l~lP~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1833)
+.+||++..+|+|+.+..++.+|.+++.+++... .+ ..++++..+...... ..++.|... .....
T Consensus 131 ~~~~~~~~~~r~~~~~~~~l~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~ 195 (885)
T KOG0059|consen 131 LLRKRFLPLRRNWRLFLAQLLLPSIFVVLALVFS--DP-----HLTLSPSLYGALYTN--YSGEINTEE------FLSVL 195 (885)
T ss_pred HHHHhhhhhhhhhhhHHHHHhhHHHHHHHHHhcc--Cc-----cccCCccccceeeec--CCccCCccH------HHHhh
Confidence 9999999999999999999999999988877665 11 111111111000000 001111100 00000
Q ss_pred hcCCcccccccCCCCCCChHHHHHHHHHhcCCCCcchhhchhHHHHHhhhhcccceecEEEee----ccCCCCceeEEEE
Q 000224 1058 IQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMSSFNESYQSRYGAIVMD----DQNDDGSLGFTVL 1133 (1833)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 1133 (1833)
.. . .... +....+.+ ...+. ..+ .+....+....+ ...........+|
T Consensus 196 ~~-----~--~~~~---~~~~~~~~-----------~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 247 (885)
T KOG0059|consen 196 EA-----N--GKGR---NLSLALNN-----------INTEV-----DNF--TVDNWTESSSKNKGDMLGRDLKDVRVSVL 247 (885)
T ss_pred hc-----c--cccc---hhhhhhhc-----------chhhh-----eee--eecceeccccccchhhhcCccccceEEEe
Confidence 00 0 0000 00000000 00000 000 000000011100 0112233567899
Q ss_pred eCCCCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCCchhhhhhhcchhhhHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000224 1134 HNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSVSIIISIAFSFIPASFAVAIVKER 1213 (1833)
Q Consensus 1134 ~n~~~~hs~p~~ln~~~nailr~~~~~~~~~I~~~~~Plp~~~~~~~~~~~~~~~~~~~~i~~~~s~i~a~f~~~~V~ER 1213 (1833)
+|+...|+.|..+|+.+|++++...... |.+.++|+|.+..+...... ..+..+.++.+.++++++.++++.+.||
T Consensus 248 ~n~k~~~~~~~~~~~~~n~l~~~~~~~~---i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~e~ 323 (885)
T KOG0059|consen 248 FNNKGLHTLPFLLGLGSNALRRALNLSG---ISVLNEPMPLSGAQLSLDLL-ADLLGALFLLFVFLLLFSVFLLSLILER 323 (885)
T ss_pred eehhhhhhHHHhcchHHHHHHHhhcccc---ceeeecCcCccHhhhhhhhh-hHHHHHHHHHHHHHHHhHHHHhHHHHHH
Confidence 9999999999999999999998875544 88999999987755432221 4566788889999999999999999999
Q ss_pred HHhHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHHHHHHhhhhhc
Q 000224 1214 EVKAKQQQLISGVSVLSYWTSTYIWDFISFLFPSSCAIILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCLTFFF 1293 (1833)
Q Consensus 1214 ~~k~k~lq~vsGv~~~~YW~s~~l~D~i~~li~~~~~iii~~~f~~~~~~~~~~~~~~~ll~llyG~a~i~~~Yl~Sf~f 1293 (1833)
..++||+|.++|+++.+||+++++||++.|++++++..+++.+|+ +........+++++++|+++++|++|+.|+.|
T Consensus 324 ~~~~~~~~~i~G~~~~~yw~~~~~~d~~~~~l~~~~~~~~~~~f~---~~~~~~~~~~~~~~~l~~~s~i~l~y~~s~~f 400 (885)
T KOG0059|consen 324 QQRLRHQQLIAGLSPSTYWLFALVWDLLLYLLILLILLIFVLIFG---FFAGNNTVIILLLLLLYIRSAIPLTYILSFIF 400 (885)
T ss_pred HHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhheee---cccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999987 66667788889999999999999999999999
Q ss_pred cCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHhhhcc-cchhhhhHHHHHHHhh-hcccCC-----
Q 000224 1294 SDHTMAQNVVLLVHFFTGLILMVISFIMGLLEA---TRSANSLLKNFFRLS-PGFCFADGLASLALLR-QGMKDK----- 1363 (1833)
Q Consensus 1294 ~~~~~a~~~~~~i~~~~g~~~~i~~~il~~~~~---~~~~~~~l~~~f~l~-P~~~l~~gl~~l~~~~-~~~~~~----- 1363 (1833)
+.+.++.....+.+++.|+...++.+++..... .......+...|.++ |.++++.+........ .++...
T Consensus 401 ~~~~~~~v~~~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 480 (885)
T KOG0059|consen 401 SKESTASVILSIYNLISGLLVFFAVFILQSFANGRTGDIFSMILVPGFTLFLPLYELSSLAAEGNLNLNDGMSLEVLGND 480 (885)
T ss_pred cCCcCceeehhhHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccc
Confidence 999999999888888888765555554443322 122334455556555 8888888877765331 111100
Q ss_pred -C-CCCcccccc--chhhHHHHHHHHHHHHHHHHHHHhccCcchhhhhHhhhhccccccccCCCCCCCcccccCCCCCCc
Q 000224 1364 -T-SDGVFDWNV--TSASICYLGCESICYFLLTLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDT 1439 (1833)
Q Consensus 1364 -~-~~~~~~~~~--~g~~i~~l~~~~i~~~lL~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1439 (1833)
. ....+.|.. .+....++..++++++++.+.++.. +.+..... .+. ......
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~-------------~~~~~~~~-------~~~----~~~~~~ 536 (885)
T KOG0059|consen 481 ESFYTLLLEWLLPLIGRRYLALVTEGVKDDLFFLLIFVP-------------FKRRMRAL-------TQN----MLKGFE 536 (885)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------------hccccccc-------ccc----ccCCCc
Confidence 0 111234555 3334455666666655555443321 00000000 000 000011
Q ss_pred CCCCCChhhHHHHhhcccCCCC---cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHH
Q 000224 1440 LDLNEDIDVQVERNRVLSGSVD---NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMI 1516 (1833)
Q Consensus 1440 ~~~~ed~dV~~E~~rv~~~~~~---~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l 1516 (1833)
....||.||.+||+++...... ...+.+++|+|.|+... . |++++||.|++|||+|++|||||||||+++||
T Consensus 537 ~~~~e~~~v~~e~~~v~~~~~~~~~~~~~~~~~L~k~y~~~~----~-Av~~ls~~V~~gecfgLLG~NGAGKtT~f~ml 611 (885)
T KOG0059|consen 537 PVEVEKLDVARERNRVETLLFRSSYSSALVLNNLSKVYGGKD----G-AVRGLSFAVPPGECFGLLGVNGAGKTTTFKML 611 (885)
T ss_pred CcchhhHHHHHHHHhhhhhhhcccccceEEEcceeeeecchh----h-hhcceEEEecCCceEEEecCCCCCchhhHHHH
Confidence 1236789999999887654332 36799999999997521 2 99999999999999999999999999999999
Q ss_pred hCCCCCCceEEEEcCeeCCCCh--HHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccc
Q 000224 1517 SGEEYPTDGTAFIFGKDIRSDP--KAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKH 1594 (1833)
Q Consensus 1517 ~Gl~~p~~G~i~i~G~~i~~~~--~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~ 1594 (1833)
+|+.+|++|+++++|.++.... .++++.||||||++++++.+|+||||.++++++|+++.++++.++++++.++|.++
T Consensus 612 tG~~~~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~~di~~~v~~ll~~~~L~~~ 691 (885)
T KOG0059|consen 612 TGETKPTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLRGLPRSDIGSAIEKLLRLVGLGPY 691 (885)
T ss_pred hCCccCCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCChhh
Confidence 9999999999999999998743 45899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEE
Q 000224 1595 AKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIG 1674 (1833)
Q Consensus 1595 ~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~ 1674 (1833)
++++++.|||||||||++|.|++++|++++|||||+||||.+||.+|++|++++ ++|+ +||+|||+|||||++|||++
T Consensus 692 ~~~~~~~ySgG~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~-k~g~-aiiLTSHsMeE~EaLCtR~a 769 (885)
T KOG0059|consen 692 ANKQVRTYSGGNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLR-KNGK-AIILTSHSMEEAEALCTRTA 769 (885)
T ss_pred hccchhhCCCcchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHH-hcCC-EEEEEcCCHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999999986 4554 89999999999999999999
Q ss_pred EEECCEEEEecChhHHHhhcCCeEEEEEeecCCccccHHHHHHHHHhhcccCCcchhhhhhhhhhhhccccccccCCCce
Q 000224 1675 IMVGGQLRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATA 1754 (1833)
Q Consensus 1675 im~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1754 (1833)
||.+|+++|.|+++|||++||.+|.++++..+..+. +.+.+.+++.+.......+. . ..-.++....
T Consensus 770 Imv~G~l~ciGs~q~LKsrfG~gy~l~~~~~~~~~~--~~v~~~~~~~~p~a~~~~~~-----~----~~~~~~ip~~-- 836 (885)
T KOG0059|consen 770 IMVIGQLRCIGSPQELKSRYGSGYTLTVRIKELPEV--SEVEKLLQNRFPGAVLKERH-----A----GLLAFEIPKD-- 836 (885)
T ss_pred eeecCeeEEecChHHHHhhcCCcEEEEEEECCCccc--chHHHHHHHhCCCcchhhhh-----h----ceEEEEcccc--
Confidence 999999999999999999999999999887653322 44555555544332111100 0 0000000000
Q ss_pred eeecchHHHHHHHHHhhccccceeEeEecCCChhhHHHHhhccccc
Q 000224 1755 AEISLSQEMLLIVGRWLGNEERIKTLISSSSSPDRIFGEQLSEQLV 1800 (1833)
Q Consensus 1755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~vf~~~t~~~~~ 1800 (1833)
+.......+..+.. ....-++.+....+.+|||||++...++-.
T Consensus 837 -~~~~~~~vF~~le~-~~~~~~i~dyslsq~tLe~VFi~~a~~q~~ 880 (885)
T KOG0059|consen 837 -EVVSLSEVFLALEK-AKESFGIEDYSLSQTTLEDVFLILAKTQED 880 (885)
T ss_pred -hhhHHHHHHHHHHH-HHHhcCHHHHHHHHhhHHHHHHHHhccccc
Confidence 00000122222222 223557788999999999999999876544
No 3
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-79 Score=787.61 Aligned_cols=224 Identities=28% Similarity=0.455 Sum_probs=195.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..|+++||+++|++++ +..+|+|+||+|++||.++|+|||||||||++++|.+++.|++|+|.|+|.|+.. +.+++|.
T Consensus 349 g~ief~nV~FsYPsRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~ 427 (1228)
T KOG0055|consen 349 GEIEFRNVCFSYPSRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRS 427 (1228)
T ss_pred cceEEEEEEecCCCCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHh
Confidence 4699999999999885 6789999999999999999999999999999999999999999999999999974 8889999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCccccc----ccCCCChhHHHHHHH
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-------LADKVNI----VVRALSGGMKRKLSL 705 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~-------L~~~~~~----~~~~LSgGqkqrl~l 705 (1833)
+||+|.|+|+||. .|++||+.++. + +.-++++.++.+..+ |++..++ +.-+||||||||+||
T Consensus 428 ~iglV~QePvlF~-~tI~eNI~~G~-----~-dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAI 500 (1228)
T KOG0055|consen 428 QIGLVSQEPVLFA-TTIRENIRYGK-----P-DATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAI 500 (1228)
T ss_pred hcCeeeechhhhc-ccHHHHHhcCC-----C-cccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHH
Confidence 9999999999986 59999999852 1 122334444443332 3333333 334799999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
||||+.+|+|||||||||+||+++++.+.++|++.++|||.|+++|++.++.. ||+|++|++|++++.|++++|.+.-|
T Consensus 501 ARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi~~~G 579 (1228)
T KOG0055|consen 501 ARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELIALGG 579 (1228)
T ss_pred HHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEecCHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999988776
Q ss_pred CcEEE
Q 000224 786 VGYTL 790 (1833)
Q Consensus 786 ~gy~l 790 (1833)
..+.+
T Consensus 580 ~Y~~l 584 (1228)
T KOG0055|consen 580 IYSSL 584 (1228)
T ss_pred hHHHH
Confidence 55443
No 4
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.8e-77 Score=727.70 Aligned_cols=225 Identities=27% Similarity=0.467 Sum_probs=201.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC----cceEEEcCccCCc----
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT----TGDALVFGKNITA---- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~----~G~i~i~g~~i~~---- 629 (1833)
..++++||++.|....+...||+|+||++.+||++||+|++||||||+.+.|.|++++. +|+|.++|.|+..
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 36999999999987755568999999999999999999999999999999999999987 8999999998743
Q ss_pred cHHHhh-cceEEEccCC--CCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCcccc--cccCCCChhHHHHH
Q 000224 630 DMDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLADKVN--IVVRALSGGMKRKL 703 (1833)
Q Consensus 630 ~~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~~~~~--~~~~~LSgGqkqrl 703 (1833)
.+..+| +.|+++||++ .|.|-+|+.+.+.-....++ ...++.++++.++|+.+||++... +++++||||||||+
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv 163 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRV 163 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHH
Confidence 334445 6799999998 46777999999976666554 558889999999999999997655 49999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
.||+||+.+|++||+||||++||+..+.++.++|++++ .|.++|+||||++.+..+||||+||.+|++++.|+++++.
T Consensus 164 ~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~ 243 (539)
T COG1123 164 MIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEIL 243 (539)
T ss_pred HHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999999999999995 4999999999999999999999999999999998875554
Q ss_pred h
Q 000224 782 H 782 (1833)
Q Consensus 782 ~ 782 (1833)
+
T Consensus 244 ~ 244 (539)
T COG1123 244 S 244 (539)
T ss_pred h
Confidence 3
No 5
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.1e-75 Score=812.42 Aligned_cols=833 Identities=19% Similarity=0.229 Sum_probs=507.7
Q ss_pred CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCC----CCCcceEEEcCccCCccHHHhhcceEEEccCCCCCC
Q 000224 574 GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI----PPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFP 649 (1833)
Q Consensus 574 ~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~----~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~ 649 (1833)
.++.+|+|+|+++++||+++|+||||||||||+|+|+|+. +|++|+|.++|.++.......|+.+|||+|++.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 3467999999999999999999999999999999999996 579999999999875333345677999999999999
Q ss_pred CCCHHHHHHHHHHhcC-------CCHHHHHHH-HHHHHHHcCCCccccccc-----CCCChhHHHHHHHHHHHhCCCcEE
Q 000224 650 ELTVREHLEMFAVLKG-------VKEELLESV-VAEMVDEVGLADKVNIVV-----RALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 650 ~lTv~e~l~~~~~~~~-------~~~~~~~~~-v~~~l~~~~L~~~~~~~~-----~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
.+||+|++.|.++++. .++++.+++ ++++++.+||.+.+|+++ +.|||||||||+||+||+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 9999999999877652 334443333 467899999998777654 679999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCH-HHHHhhcCEEEEeeCCEEEeecCHHHHHhhh-CCcEEEEE
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSM-DEAEELGDRIAIMANGSLKCCGSSLFLKHQY-GVGYTLTL 792 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~-~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~-g~gy~l~~ 792 (1833)
+|||||+|||+.++..+.+.|+++. .|+|||+++|+. +++..++|||++|++|+++..|++.+++.-+ ..||. +
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~~~yF~~lG~~--~ 309 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKAKQYFEKMGFK--C 309 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHHHHHHHHcCCC--C
Confidence 9999999999999999999999985 389999999996 7899999999999999999999998887654 23442 1
Q ss_pred EecCCChhhHHHHHHHhC-CCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEe
Q 000224 793 VKSAPDASAAADIVYRHI-PSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGI 871 (1833)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 871 (1833)
+......+++..-. |...... .+.+. ..|. ....+.+.+++-+...+ .....+...++.
T Consensus 310 ----p~~~n~aDfl~~~~~~~~~~~~-~~~e~--~~~~-~~~~~~~~~~~s~~~~~-----~~~~~~~~~~~~------- 369 (1394)
T TIGR00956 310 ----PDRQTTADFLTSLTSPAERQIK-PGYEK--KVPR-TPQEFETYWRNSPEYAQ-----LMKEIDEYLDRC------- 369 (1394)
T ss_pred ----CCCCChHHHHHhccChhhhhcc-ccccc--cCCC-CHHHHHHHHHcCHHHHH-----HHHHHHHHhhhc-------
Confidence 11111222222211 1000000 00000 0111 11112211111000000 000000000000
Q ss_pred cCCChHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHhhh
Q 000224 872 SVTTLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAVLG 951 (1833)
Q Consensus 872 s~~tlE~vfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 951 (1833)
....-.+.+... . ...+. + . .
T Consensus 370 ~~~~~~~~~~~~--------------~-----------~~~~~-~-~--~------------------------------ 390 (1394)
T TIGR00956 370 SESDTKEAYRES--------------H-----------VAKQS-K-R--T------------------------------ 390 (1394)
T ss_pred cchhhHHHHHHH--------------H-----------Hhhhc-c-c--c------------------------------
Confidence 000000000000 0 00000 0 0 0
Q ss_pred hhhhhcccccccccccchhHHHHHHHHHHHHHhHhccchhHHHHHHHHHHHHH-HHHHHHHhccCCCCCCccccccccCC
Q 000224 952 FLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFL-LVGLLFLKLKPHPDMLSVTFTTSNFN 1030 (1833)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~q~~al~~Kr~~~~~R~~~~~~~~l~lP~~~~-~~~l~~~~~~~~~~~~~~~l~~~~~~ 1030 (1833)
.........+++|++.++++.+...+||+..+...++..+++. ++|.++...... +
T Consensus 391 ----------~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~--~----------- 447 (1394)
T TIGR00956 391 ----------RPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN--T----------- 447 (1394)
T ss_pred ----------cCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC--c-----------
Confidence 0000122458999999999999999999999988777665432 334433221000 0
Q ss_pred CccCCCCCCCCcccccCchhhhhhhhhhcCCcccccccCCCCCCChHHHHHHHHHhcCCCCcchhhchhHHHHHhhhhcc
Q 000224 1031 PLLSGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMSSFNESY 1110 (1833)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1110 (1833)
. .+
T Consensus 448 ---------------------~--------------------------~~------------------------------ 450 (1394)
T TIGR00956 448 ---------------------S--------------------------DF------------------------------ 450 (1394)
T ss_pred ---------------------h--------------------------hH------------------------------
Confidence 0 00
Q ss_pred cceecEEEeeccCCCCceeEEEEeCCCCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCCchhhhhhhcchhhhHH
Q 000224 1111 QSRYGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSV 1190 (1833)
Q Consensus 1111 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~hs~p~~ln~~~nailr~~~~~~~~~I~~~~~Plp~~~~~~~~~~~~~~~~~ 1190 (1833)
.....
T Consensus 451 ---------------------------------------------------------------------------~~r~g 455 (1394)
T TIGR00956 451 ---------------------------------------------------------------------------YSRGG 455 (1394)
T ss_pred ---------------------------------------------------------------------------HHHHH
Confidence 00000
Q ss_pred HHHHHHH-HHHHhhHhHHHHHHHHHHhHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccccccCc
Q 000224 1191 SIIISIA-FSFIPASFAVAIVKEREVKAKQQQLISGV-SVLSYWTSTYIWDFISFLFPSSCAII-LFYIFGLDQFVGRGC 1267 (1833)
Q Consensus 1191 ~~~i~~~-~s~i~a~f~~~~V~ER~~k~k~lq~vsGv-~~~~YW~s~~l~D~i~~li~~~~~ii-i~~~f~~~~~~~~~~ 1267 (1833)
++++++. .++....-+.....||..-.|| .-+|. ++.+|.++..+.|+...++.+++..+ +++..++.. +.+.
T Consensus 456 ~lf~~~~~~~~~~~~~i~~~~~eR~i~~re--~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~--~~~~ 531 (1394)
T TIGR00956 456 ALFFAILFNAFSSLLEIASMYEARPIVEKH--RKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRR--TAGR 531 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcceeee--ccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcc--cHHH
Confidence 0011111 1111111112223455444333 33454 78999999999999876655544443 333433321 2233
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCchhhhHHHHHH----HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcccc
Q 000224 1268 LLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLV----HFFTGLILMVISFIMGLLEATRSANSLLKNFFRLSPG 1343 (1833)
Q Consensus 1268 ~~~~~ll~llyG~a~i~~~Yl~Sf~f~~~~~a~~~~~~i----~~~~g~~~~i~~~il~~~~~~~~~~~~l~~~f~l~P~ 1343 (1833)
++..++++++..+++..+..+++.++.+...|.....++ .++.|+ +-........++|+..+.|.
T Consensus 532 Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf-----------~i~~~~mp~~~~W~~yisp~ 600 (1394)
T TIGR00956 532 FFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGF-----------AIPRPSMLGWSKWIYYVNPL 600 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHccc-----------ccChhhccHHHHHHHHcCHH
Confidence 444555555566666667777777777766554332221 111221 11122233344555555553
Q ss_pred hhhhhHHHHHHHhhhc--cc-----------------CC----------CCC--------CccccccchhhHHHHHHHHH
Q 000224 1344 FCFADGLASLALLRQG--MK-----------------DK----------TSD--------GVFDWNVTSASICYLGCESI 1386 (1833)
Q Consensus 1344 ~~l~~gl~~l~~~~~~--~~-----------------~~----------~~~--------~~~~~~~~g~~i~~l~~~~i 1386 (1833)
.--..++......... +. .+ ... -.+.++..+.++.++++-.+
T Consensus 601 ~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v 680 (1394)
T TIGR00956 601 AYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTV 680 (1394)
T ss_pred HHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHH
Confidence 2222222211110000 00 00 000 01122233444555555555
Q ss_pred HHHHHHH-HHHhccCcchhhhhHhhhhccccccccCCCCCCCcccccCCCCCCc---CC-CCCChhhHHHHhhcccCCCC
Q 000224 1387 CYFLLTL-GLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDT---LD-LNEDIDVQVERNRVLSGSVD 1461 (1833)
Q Consensus 1387 ~~~lL~l-~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ed~dV~~E~~rv~~~~~~ 1461 (1833)
+|.++.+ .+++....... .....+-++..... .......+....+..+... .+ ..|..++. +..+... ..+
T Consensus 681 ~f~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 756 (1394)
T TIGR00956 681 FFFFVYILLTEFNKGAKQK-GEILVFRRGSLKRA-KKAGETSASNKNDIEAGEVLGSTDLTDESDDVN-DEKDMEK-ESG 756 (1394)
T ss_pred HHHHHHHHHHHhccccCCC-CceEeeccccccch-hhcccccccccccccccccCCCCcccccccccc-ccccccc-cCC
Confidence 5544433 34432110000 00000000000000 0000000000000000000 00 00000100 0000000 012
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCCh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSDP 1538 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~---p~~G~i~i~G~~i~~~~ 1538 (1833)
..+++++||++.|+.++ +++.+|+|||+++++||++||+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 757 ~~~l~~~nl~~~~~~~~--~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-- 832 (1394)
T TIGR00956 757 EDIFHWRNLTYEVKIKK--EKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-- 832 (1394)
T ss_pred CceEEEEeeEEEecCCC--CCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh--
Confidence 34689999999996321 34679999999999999999999999999999999999997 789999999998842
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC---CChhhHHHHHHHHHHHcCCccccCCCCC----CCChhHHHHHH
Q 000224 1539 KAARRLIGYCPQFDALLEYLTVQEHLELYARIKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSF----TLSGGNKRKLS 1611 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g---~~~~~~~~~~~~~l~~~~L~~~~~~~~~----~LSgG~kqrl~ 1611 (1833)
..|+.+|||||++.+++.+||+|||.+.+.++. .++++..++++++++.++|.+.+|+.++ .|||||||||+
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~ 911 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLT 911 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHH
Confidence 467889999999988899999999999887652 3444556778999999999988898887 79999999999
Q ss_pred HHHHHhcCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHH-HHHHcCEEEEEECC-EEEEecChh
Q 000224 1612 VAIAMIGDPP-IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNE-AQALCTRIGIMVGG-QLRCIGSPQ 1688 (1833)
Q Consensus 1612 lA~al~~~p~-vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e-~~~l~drv~im~~G-~i~~~g~~~ 1688 (1833)
||+||+.+|+ ||+|||||+|||+.++..+++.|+++++ +| +|||+|||+++. +.+.|||+++|++| ++++.|++.
T Consensus 912 Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g-~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 912 IGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HG-QAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cC-CEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 9999999997 9999999999999999999999999964 44 589999999986 45789999999997 999999873
No 6
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-76 Score=765.88 Aligned_cols=229 Identities=25% Similarity=0.351 Sum_probs=199.2
Q ss_pred ceEEEEeEEEEcCCCcc-----ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC
Q 000224 1463 AIIYLRNLRKVYPGGKR-----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~-----~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~ 1537 (1833)
++|+++||+|.|+.... .+.+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++...
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 47999999999963100 0124699999999999999999999999999999999999999999999999988642
Q ss_pred -h---HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHH
Q 000224 1538 -P---KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1538 -~---~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqr 1609 (1833)
. ...+++|||+||++ .+++.+||.||+.+....++. ...+.++++.++++.+||. +..++++++||||||||
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQR 471 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQR 471 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHH
Confidence 1 23467899999996 588899999999876555554 2334556788999999996 57899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
|+|||||+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|.+|++++.|++++
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g-~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~ 550 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFG-IAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 550 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999999999999965444 689999999999999999999999999999999999
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 551 i~~ 553 (623)
T PRK10261 551 VFE 553 (623)
T ss_pred Hhc
Confidence 864
No 7
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.6e-74 Score=744.03 Aligned_cols=227 Identities=30% Similarity=0.414 Sum_probs=193.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEc-Cee---CCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIF-GKD---IRSD-- 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~-G~~---i~~~-- 1537 (1833)
+|+++|++++|++.. .+.+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |.+ +...
T Consensus 279 ~l~~~~l~~~~~~~~-~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~ 357 (520)
T TIGR03269 279 IIKVRNVSKRYISVD-RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGP 357 (520)
T ss_pred eEEEeccEEEeccCC-CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccch
Confidence 688999999995310 023469999999999999999999999999999999999999999999996 643 2211
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-----ccCCCCCCCChhHHHHH
Q 000224 1538 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-----HAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1538 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~-----~~~~~~~~LSgG~kqrl 1610 (1833)
....+++|||+||++.+++.+||+||+.+.... +.+....++++.++++.++|.+ ..++++.+|||||||||
T Consensus 358 ~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv 436 (520)
T TIGR03269 358 DGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL-ELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRV 436 (520)
T ss_pred hhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHH
Confidence 123456799999998899999999999875433 3333334456788999999964 57899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|++++++.| .|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 437 ~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 515 (520)
T TIGR03269 437 ALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME-QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEI 515 (520)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999865444 6899999999999999999999999999999999887
Q ss_pred Hhh
Q 000224 1691 KTR 1693 (1833)
Q Consensus 1691 ~~~ 1693 (1833)
.++
T Consensus 516 ~~~ 518 (520)
T TIGR03269 516 VEE 518 (520)
T ss_pred Hhh
Confidence 654
No 8
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-74 Score=742.28 Aligned_cols=214 Identities=23% Similarity=0.407 Sum_probs=191.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC--CcceEEEcCccCCcc-H-HH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP--TTGDALVFGKNITAD-M-DE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i~~~-~-~~ 633 (1833)
..|+++||+|+|+ ++.+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... . ..
T Consensus 4 ~~l~~~nl~~~~~----~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 79 (506)
T PRK13549 4 YLLEMKNITKTFG----GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDT 79 (506)
T ss_pred ceEEEeeeEEEeC----CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 3699999999995 34699999999999999999999999999999999999996 899999999988532 2 23
Q ss_pred hhcceEEEccCCCCCCCCCHHHHHHHHHHhc--C-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000224 634 IRKGLGVCPQYDILFPELTVREHLEMFAVLK--G-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--~-~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
.|+.+|||||++.+++.+||+||+.+..... + .+.++.+++++++++.+|+.+..++++++||||||||++|||||+
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 159 (506)
T PRK13549 80 ERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKALN 159 (506)
T ss_pred HHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999998865432 2 244456678999999999998889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 225 (506)
T PRK13549 160 KQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTR 225 (506)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeec
Confidence 9999999999999999999999999999985 5899999999999999999999999999987544
No 9
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.6e-74 Score=741.66 Aligned_cols=227 Identities=22% Similarity=0.393 Sum_probs=193.7
Q ss_pred eEEEEeEEEEcCCCcc-----ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-
Q 000224 1464 IIYLRNLRKVYPGGKR-----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD- 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~-----~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~- 1537 (1833)
+|+++|+++.|+.+.. .+++.+++|+||+|++||++||+||||||||||+|+|+|++ |++|+|+++|+++...
T Consensus 275 ~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~ 353 (529)
T PRK15134 275 LLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLN 353 (529)
T ss_pred cccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccc
Confidence 5788899999952100 01356999999999999999999999999999999999998 4999999999988542
Q ss_pred hH---HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcC--CChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHH
Q 000224 1538 PK---AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKG--VAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1538 ~~---~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g--~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqr 1609 (1833)
.. ..++++||+||++ .+++.+||+||+.+....++ .+..+.++++.++++.++|. +..++++.+||||||||
T Consensus 354 ~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qr 433 (529)
T PRK15134 354 RRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQR 433 (529)
T ss_pred hhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHH
Confidence 21 2356799999996 47888999999987654332 34444456788899999997 56899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
|+||+||+.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+|||+++|++|++++.|++++
T Consensus 434 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 512 (529)
T PRK15134 434 IAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQ-LAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCER 512 (529)
T ss_pred HHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999999999999965434 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 513 ~~~ 515 (529)
T PRK15134 513 VFA 515 (529)
T ss_pred Hhc
Confidence 754
No 10
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6.2e-72 Score=773.01 Aligned_cols=822 Identities=20% Similarity=0.251 Sum_probs=496.6
Q ss_pred cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC---cceEEEcCccCCccHHHhhcceEEEccCCCCCCCC
Q 000224 575 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITADMDEIRKGLGVCPQYDILFPEL 651 (1833)
Q Consensus 575 ~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~l 651 (1833)
++.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..|+.+|||+|++.+++.+
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~--~~~~~i~yv~Q~d~~~~~l 254 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEF--VPRKTSAYISQNDVHVGVM 254 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhh--cccceeEEecccccCCCcC
Confidence 356999999999999999999999999999999999999998 99999999987432 1267899999999999999
Q ss_pred CHHHHHHHHHHhcCCC----------HHHH------------------------HHHHHHHHHHcCCCccc-----cccc
Q 000224 652 TVREHLEMFAVLKGVK----------EELL------------------------ESVVAEMVDEVGLADKV-----NIVV 692 (1833)
Q Consensus 652 Tv~e~l~~~~~~~~~~----------~~~~------------------------~~~v~~~l~~~~L~~~~-----~~~~ 692 (1833)
||+|+|.|.+++++.. +++. +..++++++.+||++.. |+.+
T Consensus 255 TV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~ 334 (1470)
T PLN03140 255 TVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMI 334 (1470)
T ss_pred cHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccc
Confidence 9999999988766421 1110 12357799999998765 4566
Q ss_pred CCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCH-HHHHhhcCEEEEeeCC
Q 000224 693 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSM-DEAEELGDRIAIMANG 769 (1833)
Q Consensus 693 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~-~e~~~l~Dri~im~~G 769 (1833)
+.|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++. .|+|+|+++|+. +++..++|+|++|++|
T Consensus 335 rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G 414 (1470)
T PLN03140 335 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEG 414 (1470)
T ss_pred cCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCc
Confidence 8999999999999999999999999999999999999999999999984 489999999996 6899999999999999
Q ss_pred EEEeecCHHHHHhhh-CCcEEEEEEecCCChhhHHHHHHHhCCCceEEeeeCcEE-EEEecCC--CcchHHHHHHHHHHh
Q 000224 770 SLKCCGSSLFLKHQY-GVGYTLTLVKSAPDASAAADIVYRHIPSALCVSEVGTEI-TFKLPLA--SSSSFESMFREIESC 845 (1833)
Q Consensus 770 ~l~~~G~~~~Lk~~~-g~gy~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~p~~--~~~~~~~~~~~le~~ 845 (1833)
+++..|+..+++..+ ..||. +. ......+++..-.... +..... .-..|.. ....+.+.++.-+..
T Consensus 415 ~ivy~G~~~~~~~yF~~lGf~--cP----~~~n~ADFl~~v~s~~----~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~ 484 (1470)
T PLN03140 415 QIVYQGPRDHILEFFESCGFK--CP----ERKGTADFLQEVTSKK----DQEQYWADRNKPYRYISVSEFAERFKSFHVG 484 (1470)
T ss_pred eEEEeCCHHHHHHHHHHcCCC--CC----CCCChHHHHHHhcCch----hhhhhhhccCCccccCCHHHHHHHHHhcHHH
Confidence 999999998887654 23552 11 1112223332211100 000000 0001110 011122211111000
Q ss_pred hhhccccccccccccccCCCeeEEEecCCChHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccC
Q 000224 846 IRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFG 925 (1833)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tlE~vfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (1833)
.+ + ...+++.+ ++. . .+... ...
T Consensus 485 ~~----------------~--------~~~~~~~~--------~~~-----~--------------~~~~~-----~~~- 507 (1470)
T PLN03140 485 MQ----------------L--------ENELSVPF--------DKS-----Q--------------SHKAA-----LVF- 507 (1470)
T ss_pred HH----------------H--------HHHHhhhh--------hhh-----h--------------ccccc-----ccC-
Confidence 00 0 00000000 000 0 00000 000
Q ss_pred CcccccceeeeeecchhhhhhHHhhhhhhhhcccccccccccchhHHHHHHHHHHHHHhHhccchhHHHHHHHHHHHHH-
Q 000224 926 NYKWVFGFIVTVVQRACTLIVAAVLGFLNFLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFL- 1004 (1833)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~al~~Kr~~~~~R~~~~~~~~l~lP~~~~- 1004 (1833)
..-...++.|+++++++.+...+||+..+.+.++.-+++.
T Consensus 508 ---------------------------------------~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~al 548 (1470)
T PLN03140 508 ---------------------------------------SKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAA 548 (1470)
T ss_pred ---------------------------------------CCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 0011346889999999999999999998888776665543
Q ss_pred HHHHHHHhccCCCCCCccccccccCCCccCCCCCCCCcccccCchhhhhhhhhhcCCcccccccCCCCCCChHHHHHHHH
Q 000224 1005 LVGLLFLKLKPHPDMLSVTFTTSNFNPLLSGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAV 1084 (1833)
Q Consensus 1005 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1084 (1833)
++|.++.....+.. +..
T Consensus 549 i~GsvF~~~~~~~~--------------------------------------------------------~~~------- 565 (1470)
T PLN03140 549 IASTVFLRTEMHTR--------------------------------------------------------NEE------- 565 (1470)
T ss_pred HHHHHHhcCCCCCC--------------------------------------------------------cch-------
Confidence 33444433210000 000
Q ss_pred HhcCCCCcchhhchhHHHHHhhhhcccceecEEEeeccCCCCceeEEEEeCCCCCChHHHHHHHHHHHHHHHhcCCCcce
Q 000224 1085 DAAGPTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMT 1164 (1833)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~hs~p~~ln~~~nailr~~~~~~~~~ 1164 (1833)
++ +
T Consensus 566 ----------------------------------------~~--------------------~----------------- 568 (1470)
T PLN03140 566 ----------------------------------------DG--------------------A----------------- 568 (1470)
T ss_pred ----------------------------------------hH--------------------H-----------------
Confidence 00 0
Q ss_pred EEEEeecCCCchhhhhhhcchhhhHHHHHHH--HHHHHHhhHhHHHHHHHHHHhHHHHHHHhC-CChHHHHHHHHHHHHH
Q 000224 1165 IRTRNHPLPTTQSQQLQRHDLDAFSVSIIIS--IAFSFIPASFAVAIVKEREVKAKQQQLISG-VSVLSYWTSTYIWDFI 1241 (1833)
Q Consensus 1165 I~~~~~Plp~~~~~~~~~~~~~~~~~~~~i~--~~~s~i~a~f~~~~V~ER~~k~k~lq~vsG-v~~~~YW~s~~l~D~i 1241 (1833)
.....+..++.+. .+++-++..+ .||..=.||-.. + .++++|.++..+.|+.
T Consensus 569 ------------------~~~g~lff~~l~~~~~~~~~l~~~~-----~~r~vf~ker~~--~~Y~~~ay~la~~l~~iP 623 (1470)
T PLN03140 569 ------------------LYIGALLFSMIINMFNGFAELALMI-----QRLPVFYKQRDL--LFHPPWTFTLPTFLLGIP 623 (1470)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHH-----hccchhHHhhhc--cCcCHHHHHHHHHHHHHH
Confidence 0000000000000 0111122222 333332222221 3 4789999999999998
Q ss_pred HHHHHHHHH-HHHHHHHhcccccccCchHHHHHHHHHHHHHHHHHHHhhhhhccCchhhhHHHHHHHHHHHHHHHHHHHH
Q 000224 1242 SFLFPSSCA-IILFYIFGLDQFVGRGCLLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFI 1320 (1833)
Q Consensus 1242 ~~li~~~~~-iii~~~f~~~~~~~~~~~~~~~ll~llyG~a~i~~~Yl~Sf~f~~~~~a~~~~~~i~~~~g~~~~i~~~i 1320 (1833)
..++.+++. +++++..++.. ..+.++..++++++..++...+..+++..+.+...|.....++.. +....
T Consensus 624 ~~~i~~~if~~I~Y~m~Gl~~--~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l-------~~~lf 694 (1470)
T PLN03140 624 ISIIESVVWVVITYYSIGFAP--EASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLL-------LVFLL 694 (1470)
T ss_pred HHHHHHHHHHhHHhhhcCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH-------HHHHH
Confidence 877666554 44444544432 223455555555555666666666777666665554433221110 00001
Q ss_pred HHHHHHhHHHHHHHHHhhhcccchhhhhHHHHHHHhhhcccCC------CCC--------Cccc-cccchhhHHHHHHHH
Q 000224 1321 MGLLEATRSANSLLKNFFRLSPGFCFADGLASLALLRQGMKDK------TSD--------GVFD-WNVTSASICYLGCES 1385 (1833)
Q Consensus 1321 l~~~~~~~~~~~~l~~~f~l~P~~~l~~gl~~l~~~~~~~~~~------~~~--------~~~~-~~~~g~~i~~l~~~~ 1385 (1833)
-+.+-........++|+..+.|..--..++..-.......... ... +... ....+.++..|++-.
T Consensus 695 ~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~ 774 (1470)
T PLN03140 695 GGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFT 774 (1470)
T ss_pred ccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHH
Confidence 1111112233445566666666322112222211100000000 000 0000 011123333444434
Q ss_pred HHHHHH-HHHHHhccCcchhhhhHhhhhccccccccCCCCCCCccc-ccCCC-CC---Cc------CCC---CCChhhHH
Q 000224 1386 ICYFLL-TLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPL-LQSSS-ES---DT------LDL---NEDIDVQV 1450 (1833)
Q Consensus 1386 i~~~lL-~l~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~---~~------~~~---~ed~dV~~ 1450 (1833)
++|.++ .+.+++....... .....+...... .......+. .+... .. .. ... ..+....
T Consensus 775 v~f~~l~~l~L~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 848 (1470)
T PLN03140 775 ILFNVLFTLALTYLNPLGKK----QAIISEETAEEM-EGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLE- 848 (1470)
T ss_pred HHHHHHHHHHHHhcCccCCC----Cccccccchhhh-hccccccccccccccccccccccccccccccccccccccccc-
Confidence 444333 3333432110000 000000000000 000000000 00000 00 00 000 0000000
Q ss_pred HHhhccc--C---CCCcceEEEEeEEEEcCCCcc-------ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhC
Q 000224 1451 ERNRVLS--G---SVDNAIIYLRNLRKVYPGGKR-------SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISG 1518 (1833)
Q Consensus 1451 E~~rv~~--~---~~~~~~l~v~~l~k~y~~~~~-------~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~G 1518 (1833)
+...+.. + ......+..+||++..+.... .+++.+|+|+|+++++||+++|+||||||||||+++|+|
T Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG 928 (1470)
T PLN03140 849 AANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAG 928 (1470)
T ss_pred cccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcC
Confidence 0000000 0 011225899999988753210 134579999999999999999999999999999999999
Q ss_pred CCCC--CceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc---CCChhhHHHHHHHHHHHcCCcc
Q 000224 1519 EEYP--TDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK---GVAEYRMDDVVMEKLVEFDLLK 1593 (1833)
Q Consensus 1519 l~~p--~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~~~~~l~~~~L~~ 1593 (1833)
..++ .+|+|.++|.+... ...++.+|||+|++.+++.+||+|+|.+.+.++ ..+.++..+.++++++.++|.+
T Consensus 929 ~~~~g~~~G~I~inG~~~~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~ 1006 (1470)
T PLN03140 929 RKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN 1006 (1470)
T ss_pred CCCCCcccceEEECCccCCh--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh
Confidence 9763 78999999987642 345677999999999999999999999887654 2333445567889999999998
Q ss_pred ccCCCC-----CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHH-HHH
Q 000224 1594 HAKKPS-----FTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMN-EAQ 1667 (1833)
Q Consensus 1594 ~~~~~~-----~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~-e~~ 1667 (1833)
.+++++ +.|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++++ +| +|||+|||+++ ++.
T Consensus 1007 ~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~-~g-~tVI~t~Hq~~~~i~ 1084 (1470)
T PLN03140 1007 LKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG-RTVVCTIHQPSIDIF 1084 (1470)
T ss_pred HhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCCCHHHH
Confidence 888886 58999999999999999999999999999999999999999999999964 45 58999999998 578
Q ss_pred HHcCEEEEEEC-CEEEEecChh
Q 000224 1668 ALCTRIGIMVG-GQLRCIGSPQ 1688 (1833)
Q Consensus 1668 ~l~drv~im~~-G~i~~~g~~~ 1688 (1833)
.+|||+++|++ |++++.|++.
T Consensus 1085 ~~~D~vllL~~gG~~v~~G~~~ 1106 (1470)
T PLN03140 1085 EAFDELLLMKRGGQVIYSGPLG 1106 (1470)
T ss_pred HhCCEEEEEcCCCEEEEECCcc
Confidence 89999999996 8999999863
No 11
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-74 Score=738.38 Aligned_cols=215 Identities=32% Similarity=0.462 Sum_probs=190.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHH-Hhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r 635 (1833)
..++++||+|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ... ..+
T Consensus 4 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 79 (510)
T PRK09700 4 PYISMAGIGKSFGP----VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQ 79 (510)
T ss_pred ceEEEeeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHH
Confidence 36999999999953 469999999999999999999999999999999999999999999999998853 222 235
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH----hcCC---CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAV----LKGV---KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~----~~~~---~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~a 708 (1833)
+++||+||++.+++.+||+||+.+... ..+. +.++.++++.++++.+||.+..++++++|||||||||+||||
T Consensus 80 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia~a 159 (510)
T PRK09700 80 LGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKT 159 (510)
T ss_pred CCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 679999999999999999999986432 1222 234556788999999999988999999999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
|+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~ 228 (510)
T PRK09700 160 LMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGM 228 (510)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecc
Confidence 999999999999999999999999999999985 58999999999999999999999999999876554
No 12
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-73 Score=731.16 Aligned_cols=213 Identities=25% Similarity=0.433 Sum_probs=190.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc--HHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD--MDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~--~~~~r~ 636 (1833)
.|+++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....++
T Consensus 4 ~i~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (501)
T PRK10762 4 LLQLKGIDKAFPG----VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEA 79 (501)
T ss_pred eEEEeeeEEEeCC----eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhC
Confidence 5899999999953 4699999999999999999999999999999999999999999999999987532 223457
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
.+||+||++.+++.+||+||+.++.... ..+.++.++++.++++.+||.+..++++++||||||||++|||||+.+
T Consensus 80 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 159 (501)
T PRK10762 80 GIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVLSFE 159 (501)
T ss_pred CEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHhcC
Confidence 8999999999999999999998864332 123445567889999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|++|||||||+|||+.++++++++|++++ +|+|||++|||++++..+||||++|++|+++..|
T Consensus 160 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~ 223 (501)
T PRK10762 160 SKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAER 223 (501)
T ss_pred CCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEec
Confidence 99999999999999999999999999985 5899999999999999999999999999987544
No 13
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.8e-73 Score=727.51 Aligned_cols=211 Identities=24% Similarity=0.420 Sum_probs=186.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC--CcceEEEcCccCCc-cH-HHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP--TTGDALVFGKNITA-DM-DEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i~~-~~-~~~r 635 (1833)
|+++||+|.|+ ++.+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. +. ...+
T Consensus 2 l~i~~l~~~~~----~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (500)
T TIGR02633 2 LEMKGIVKTFG----GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTER 77 (500)
T ss_pred EEEEeEEEEeC----CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHh
Confidence 78999999995 24699999999999999999999999999999999999997 79999999998853 22 2345
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc--C--CCHHHHHHHHHHHHHHcCCCccc-ccccCCCChhHHHHHHHHHHHh
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLK--G--VKEELLESVVAEMVDEVGLADKV-NIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--~--~~~~~~~~~v~~~l~~~~L~~~~-~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
+.+||+||++.+++.+||+||+.+..... + .+.++.+++++++++.+||.+.. ++++++|||||||||+|||||+
T Consensus 78 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~ 157 (500)
T TIGR02633 78 AGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALN 157 (500)
T ss_pred CCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHh
Confidence 78999999999999999999998764432 1 33445667889999999998764 6789999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEee
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCC 774 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~ 774 (1833)
.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..
T Consensus 158 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~ 222 (500)
T TIGR02633 158 KQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVAT 222 (500)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeee
Confidence 9999999999999999999999999999985 589999999999999999999999999998643
No 14
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-72 Score=723.75 Aligned_cols=212 Identities=26% Similarity=0.465 Sum_probs=190.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHH-hh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDE-IR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~-~r 635 (1833)
..|+++||+|+|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .... .+
T Consensus 10 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 85 (510)
T PRK15439 10 PLLCARSISKQYSG----VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQ 85 (510)
T ss_pred ceEEEEeEEEEeCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHh
Confidence 36999999999953 469999999999999999999999999999999999999999999999998753 2222 34
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+||+||+.+... ...+.++++.++++.+||.+..++++++|||||||||+|||||+.+|++
T Consensus 86 ~~i~~v~q~~~~~~~~tv~e~l~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~l 161 (510)
T PRK15439 86 LGIYLVPQEPLLFPNLSVKENILFGLP----KRQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRI 161 (510)
T ss_pred CCEEEEeccCccCCCCcHHHHhhcccc----cchHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 579999999999999999999987532 1234567789999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 777 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~ 777 (1833)
|||||||+|||+.++++++++|++++ +|+|||++|||++++..+||||++|++|+++..|++
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKT 224 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCh
Confidence 99999999999999999999999985 589999999999999999999999999999877764
No 15
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-72 Score=723.34 Aligned_cols=212 Identities=27% Similarity=0.461 Sum_probs=190.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 635 (1833)
+.++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....|
T Consensus 3 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 78 (501)
T PRK11288 3 PYLSFDGIGKTFPG----VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALA 78 (501)
T ss_pred ceEEEeeeEEEECC----EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHh
Confidence 36899999999953 469999999999999999999999999999999999999999999999998753 233457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--hcC-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAV--LKG-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--~~~-~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
+++||+||++.+++.+||.||+.+... ..+ .+..+.++++.++++.+||.+..++++++||||||||++|||||+.+
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~ 158 (501)
T PRK11288 79 AGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALARN 158 (501)
T ss_pred CCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHHhC
Confidence 889999999999999999999987532 123 34455677899999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEe
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 773 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~ 773 (1833)
|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999985 58999999999999999999999999999864
No 16
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-72 Score=715.06 Aligned_cols=211 Identities=26% Similarity=0.401 Sum_probs=187.1
Q ss_pred EEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhhcceE
Q 000224 562 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRKGLG 639 (1833)
Q Consensus 562 i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~~ig 639 (1833)
++||+|.|+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....++.+|
T Consensus 1 ~~nl~~~~~----~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 1 MSNISKSFP----GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred CCceEEEeC----CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEE
Confidence 368999995 3469999999999999999999999999999999999999999999999998753 2334567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHH-hcC--CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 640 VCPQYDILFPELTVREHLEMFAV-LKG--VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~-~~~--~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
|+||++.+++.+||+||+.+... ..+ .+.++..++++++++.+|+.+..++++.+|||||||||+|||||+.+|++|
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ll 156 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIV 156 (491)
T ss_pred EEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999989999999999987532 223 234455678899999999998889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|+
T Consensus 157 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 217 (491)
T PRK10982 157 IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQP 217 (491)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999985 58999999999999999999999999999875443
No 17
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.7e-68 Score=735.70 Aligned_cols=561 Identities=26% Similarity=0.424 Sum_probs=425.1
Q ss_pred eeeeccCCCcccchH---HHHHHHHHHHHHHHHHHHhHHHHHhHHHHHHHHHhHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 000224 263 IRMVPFPTREYTDDE---FQSIIKRVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQF 339 (1833)
Q Consensus 263 ~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~v~~iv~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~ 339 (1833)
+...|+|........ ........++++++++|.+..+.++.++|.||++|.|+++.++|++..+||+|.|++-++.+
T Consensus 1656 v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~asfv~~~V~ER~skaK~lQ~vSGv~~~~YWls~fl~D~~~y 1735 (2272)
T TIGR01257 1656 VISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFVLYLIQERVNKAKHLQFISGVSPTTYWLTNFLWDIMNY 1735 (2272)
T ss_pred EEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHHHheeeehHHhhhHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 345677765322111 11123345667777888888888999999999999999999999999999999999877777
Q ss_pred HHHHHHHHHHH----hcccccccChhhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH-HHH---hhhhc---
Q 000224 340 AVSSGIITACT----MDSLFKYSDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFL-GAF---FPYYT--- 408 (1833)
Q Consensus 340 ~i~~~i~~~~~----~~~~f~~s~~~~~f~~~~l~~~s~i~~~f~iS~fF~~~~~a~~~~~l~~~-~~~---~~~~~--- 408 (1833)
+|.+++++++. ...+....++..+++++++||+|.|.|+|++|.+|+++.+|.++..++.+ ..+ +..++
T Consensus 1736 ~i~~~~~i~i~~~f~~~~~~~~~~l~~~~lll~lyG~a~ip~tYl~SflF~~~~~A~~~~~~in~~~G~~~~i~~~il~~ 1815 (2272)
T TIGR01257 1736 AVSAGLVVGIFIGFQKKAYTSPENLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLEL 1815 (2272)
T ss_pred HHHHHHHHHHHHHhChhhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655443221 12223335677889999999999999999999999999998654332221 111 11111
Q ss_pred ccC----CCchhHHhHHHhhhchhHHHHHHHHHHHHhh-------ccC-----CccccccccCCCCchHHHHHHHHHHHH
Q 000224 409 VND----EAVPMVLKVIASLLSPTAFALGSVNFADYER-------AHV-----GLRWSNMWRASSGVNFLVCLLMMLLDT 472 (1833)
Q Consensus 409 ~~~----~~~~~~~~~~~sl~~~~a~~~~~~~~~~~e~-------~~~-----g~~~~~~~~~~~~~~~~~~~~~l~~~~ 472 (1833)
+.. ......+++++.++|..+++.|+..++.... .+. ..+|+. .+..+++|++++
T Consensus 1816 ~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~ll~m~~~~ 1886 (2272)
T TIGR01257 1816 FENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYAQFGEEHSANPFQWDL---------IGKNLVAMAVEG 1886 (2272)
T ss_pred hcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHHHHHHHHhhcccccCCccchhh---------ccHHHHHHHHHH
Confidence 111 1124567888888999999988877764321 110 011211 234567888999
Q ss_pred HHHHHHHHHHhccccCCCCccccccccccccccCccccccccccchhHHhhhhhhhhhhhhhccccCcchhhhhhhhccc
Q 000224 473 LLYGVIGLYLDKVLPKENGVRYRWNFIFQNCFRRKKSVIKHHVSSAEVKINKKLSKEKECAFALDACEPVVEAISLDMKQ 552 (1833)
Q Consensus 473 ~ly~~l~~yld~v~p~~~G~~~p~~f~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 552 (1833)
++|++|.+++|.-. .... |.+...... . ...+++..+|+.. + ..
T Consensus 1887 iv~flLl~~ie~~~-----~~~~---------~~~~~~~~~----~-~~eD~DV~~Er~r-------------V----~~ 1930 (2272)
T TIGR01257 1887 VVYFLLTLLIQHHF-----FLSR---------WIAEPAKEP----I-FDEDDDVAEERQR-------------I----IS 1930 (2272)
T ss_pred HHHHHHHHHHHhhh-----hhhh---------hccccCcCc----C-CCchhHHHHHHHH-------------H----hc
Confidence 99999999998521 0001 111110000 0 0001111111110 0 00
Q ss_pred cccCcceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHH
Q 000224 553 QEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMD 632 (1833)
Q Consensus 553 ~~~~~~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~ 632 (1833)
.......|+++||+|.|+++ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++..+..
T Consensus 1931 ~~~~~~~L~v~nLsK~Y~~~--~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~ 2008 (2272)
T TIGR01257 1931 GGNKTDILRLNELTKVYSGT--SSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNIS 2008 (2272)
T ss_pred cCCCCceEEEEEEEEEECCC--CceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHH
Confidence 01123579999999999632 2579999999999999999999999999999999999999999999999999876566
Q ss_pred HhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 633 EIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 633 ~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
+.|+.||||||++.+++.+||+||+.++++++|.+.++.+++++++++.+||.+..++++++|||||||||+||+||+++
T Consensus 2009 ~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2009 DVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred HHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 67888999999999999999999999999999988777788899999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEE
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLT 791 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~ 791 (1833)
|+||||||||+||||.+|+.+|++|++++ +|+|||+|||+|+|++.+||||++|++|+++|.|++++||++||.||.++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l~ 2168 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIVT 2168 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEEE
Confidence 99999999999999999999999999985 68999999999999999999999999999999999999999999999988
Q ss_pred EEecCCCh------hhHHHHHHHhCCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCC
Q 000224 792 LVKSAPDA------SAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLG 865 (1833)
Q Consensus 792 ~~~~~~~~------~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~ 865 (1833)
+....+.. ....+.+.+.+|++...+.....++|.+|.. .+.++|+.+++. ++.++
T Consensus 2169 i~~~~~~~~~~~~~~~v~~~i~~~fp~a~~~e~~~~~l~~~i~~~---~~~~if~~L~~~---------------k~~l~ 2230 (2272)
T TIGR01257 2169 MKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVSSS---SLARIFQLLISH---------------KDSLL 2230 (2272)
T ss_pred EEEcCcchhhhhHHHHHHHHHhhcCccceeeccccceEEEEeCcc---cHHHHHHHHHhc---------------CCCCC
Confidence 76443221 1233456677888777666677888999853 577888888763 34688
Q ss_pred eeEEEecCCChHHHHHHHhcCCC
Q 000224 866 IESFGISVTTLEEVFLRVAGCNL 888 (1833)
Q Consensus 866 i~~~~~s~~tlE~vfl~~~~~~~ 888 (1833)
|.+|+++++||||||+++++...
T Consensus 2231 I~dysvsqtSLE~VFl~l~~~q~ 2253 (2272)
T TIGR01257 2231 IEEYSVTQTTLDQVFVNFAKQQT 2253 (2272)
T ss_pred eEEEEcCCCCHHHHHHHHhcccc
Confidence 99999999999999999987543
No 18
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=7.5e-71 Score=705.47 Aligned_cols=207 Identities=23% Similarity=0.279 Sum_probs=182.5
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.|+++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.
T Consensus 3 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~ 78 (490)
T PRK10938 3 SLQISQGTFRLSD----TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKL 78 (490)
T ss_pred eEEEEeEEEEcCC----eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHH
Confidence 4899999999953 359999999999999999999999999999999999999999999999987643 33445667
Q ss_pred eEEEccCCCC--C------CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHH
Q 000224 638 LGVCPQYDIL--F------PELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 638 ig~~~Q~~~l--~------~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
+|+++|++.+ + ..+|++|++.+. ...+++++++++.+||.+..++++++|||||||||+||+||
T Consensus 79 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 79 VSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE--------VKDPARCEQLAQQFGITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred hceeccCcchhhcccchhhccccHHHhcccc--------hhHHHHHHHHHHHcCCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 9999998642 1 147888887542 12356788999999999889999999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCH
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 777 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~ 777 (1833)
+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|+++..|++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 219 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGER 219 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999985 489999999999999999999999999999876654
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.5e-68 Score=738.98 Aligned_cols=221 Identities=20% Similarity=0.318 Sum_probs=185.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC---------------------
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--------------------- 1522 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p--------------------- 1522 (1833)
.|+++||+++|+++ +++++|+|+||+|++||++||+||+||||||++++|.|+++|
T Consensus 1165 ~I~f~nVsF~Y~~~---~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~ 1241 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR---PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQD 1241 (1466)
T ss_pred eEEEEEEEEECCCC---CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccc
Confidence 49999999999752 134699999999999999999999999999999999999998
Q ss_pred ---------------------------------CceEEEEcCeeCCC-ChHHhccceEEEecCCCCCCCCCHHHHHHHHH
Q 000224 1523 ---------------------------------TDGTAFIFGKDIRS-DPKAARRLIGYCPQFDALLEYLTVQEHLELYA 1568 (1833)
Q Consensus 1523 ---------------------------------~~G~i~i~G~~i~~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~ 1568 (1833)
++|+|.+||.|++. +...+|++||||||++.||+ .|++|||.++.
T Consensus 1242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~ 1320 (1466)
T PTZ00265 1242 YQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGK 1320 (1466)
T ss_pred cccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCC
Confidence 69999999999976 66788999999999999986 79999998752
Q ss_pred HHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Q 000224 1569 RIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAK 1637 (1833)
Q Consensus 1569 ~~~g~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~ 1637 (1833)
...+. +++.++++..++. .........||||||||++|||||+++|+|||||||||+||+++.
T Consensus 1321 --~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE 1394 (1466)
T PTZ00265 1321 --EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSE 1394 (1466)
T ss_pred --CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHH
Confidence 12232 2344445544443 233345668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC----CEEE-EecChhHHHhh-cCC
Q 000224 1638 RFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG----GQLR-CIGSPQHLKTR-FGN 1696 (1833)
Q Consensus 1638 ~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~----G~i~-~~g~~~~l~~~-~~~ 1696 (1833)
+.+.+.|.++...++ +|+|++||+++.+.. ||||++|++ |+++ +.|++++|.++ .|.
T Consensus 1395 ~~I~~~L~~~~~~~~-~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~ 1457 (1466)
T PTZ00265 1395 KLIEKTIVDIKDKAD-KTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGV 1457 (1466)
T ss_pred HHHHHHHHHHhccCC-CEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHHhcCCCh
Confidence 999999998742233 589999999998875 999999999 9955 89999999863 443
No 20
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-69 Score=618.17 Aligned_cols=223 Identities=26% Similarity=0.479 Sum_probs=200.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..+.++||+..|....+.+.||+++||+|++||.+||+|++|||||-+.+.+.|+++- -+|+|.++|.|+-.
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 5699999999998777788999999999999999999999999999999999999985 37999999999842
Q ss_pred -cHHHhh-cceEEEccCC--CCCCCCCHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHcCCCcc---cccccCCCChhHHH
Q 000224 630 -DMDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVL-KGVKEELLESVVAEMVDEVGLADK---VNIVVRALSGGMKR 701 (1833)
Q Consensus 630 -~~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~-~~~~~~~~~~~v~~~l~~~~L~~~---~~~~~~~LSgGqkq 701 (1833)
.+..+| .+||++||+| .|.|-.|+...+.-..++ +|+++++.++++.++|+.+|+.+. .+.++++|||||||
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQ 164 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQ 164 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhh
Confidence 345566 5799999999 588888998887655444 588999999999999999999863 58899999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHH
Q 000224 702 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF 779 (1833)
Q Consensus 702 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~ 779 (1833)
||.||+||+.+|++||-||||++||..-+.++.++|+++++ |.++++||||+.-+..+||||+||.+|++++.|+.+.
T Consensus 165 RVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~ 244 (534)
T COG4172 165 RVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTET 244 (534)
T ss_pred HHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHH
Confidence 99999999999999999999999999999999999999963 9999999999999999999999999999998887544
Q ss_pred H
Q 000224 780 L 780 (1833)
Q Consensus 780 L 780 (1833)
|
T Consensus 245 l 245 (534)
T COG4172 245 L 245 (534)
T ss_pred H
Confidence 4
No 21
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-68 Score=688.44 Aligned_cols=207 Identities=24% Similarity=0.319 Sum_probs=181.9
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+.+|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.
T Consensus 317 ~~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~--------- 381 (530)
T PRK15064 317 RNALEVENLTKGFDN------GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN--------- 381 (530)
T ss_pred CceEEEEeeEEeeCC------ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc---------
Confidence 357999999999953 45899999999999999999999999999999999999999999999873
Q ss_pred ccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1542 RRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
+++||+||++. +++.+|++|++.++.. . ...++.+.++++.+++. +..++++.+|||||||||+||+||+.
T Consensus 382 -~~i~~~~q~~~~~~~~~~t~~~~~~~~~~----~-~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 382 -ANIGYYAQDHAYDFENDLTLFDWMSQWRQ----E-GDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred -eEEEEEcccccccCCCCCcHHHHHHHhcc----C-CccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 46999999863 5567999999865321 1 11235677899999994 67899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHhhc
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKTRF 1694 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~-~~g~~~~l~~~~ 1694 (1833)
+|++|||||||+|||+.+++.+++.|+++ + .|||++|||++++..+|||+++|++|+++ +.|+++++.+..
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~----~-~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY----E-GTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC----C-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 99999999999999999999999999876 2 38999999999999999999999999998 889998887654
No 22
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-68 Score=648.03 Aligned_cols=212 Identities=29% Similarity=0.489 Sum_probs=197.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC--ccHHHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r 635 (1833)
+.++++|++|+|+ .+.||+|+||++++||++||+|+||||||||+|+|+|.++||+|+|.++|+.+. ...+..+
T Consensus 7 ~ll~~~~i~K~Fg----gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 7 PLLELRGISKSFG----GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALA 82 (500)
T ss_pred ceeeeecceEEcC----CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHh
Confidence 4689999999994 578999999999999999999999999999999999999999999999999885 3455667
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKG----VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~----~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
..|+.++|+..|+|+|||.||+.++..... +++..+.+++.++|+.+|+....++++++||+||||.|+|||||..
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHHhc
Confidence 899999999999999999999988765432 5778899999999999999755899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEe
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 773 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~ 773 (1833)
+++|||||||||+|++...+.+++++++++ +|.+||++||+|+|+.++||||.||+||+.++
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~ 225 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVG 225 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEee
Confidence 999999999999999999999999999997 69999999999999999999999999999764
No 23
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.2e-67 Score=683.36 Aligned_cols=208 Identities=27% Similarity=0.374 Sum_probs=178.8
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+++|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ ++
T Consensus 322 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~------- 387 (556)
T PRK11819 322 DKVIEAENLSKSFGD------RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV------- 387 (556)
T ss_pred CeEEEEEeEEEEECC------eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce-------
Confidence 357999999999953 4699999999999999999999999999999999999999999999843 21
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1542 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1542 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
+|||+||++ .+++.+|++||+.+.....+.... +..+.++++.+++.+ ..++++++|||||||||+||+||+.+
T Consensus 388 --~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~ 463 (556)
T PRK11819 388 --KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNR--EIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQG 463 (556)
T ss_pred --EEEEEeCchhhcCCCCCHHHHHHhhccccccccc--HHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 499999996 788889999999876433333221 223456899999964 57999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-CEEE-EecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-GQLR-CIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~-G~i~-~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|+++ . + |||++|||+++++.+||||++|++ |++. ..|+.+++.+
T Consensus 464 p~lllLDEPt~~LD~~~~~~l~~~l~~~--~-~--tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 464 GNVLLLDEPTNDLDVETLRALEEALLEF--P-G--CAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC--C-C--eEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 9999999999999999999999999986 2 2 799999999999999999999986 7876 4777776644
No 24
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.2e-66 Score=673.97 Aligned_cols=208 Identities=25% Similarity=0.349 Sum_probs=178.0
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+++++++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++ ++
T Consensus 320 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~------- 385 (552)
T TIGR03719 320 DKVIEAENLSKGFGD------KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV------- 385 (552)
T ss_pred CeEEEEeeEEEEECC------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce-------
Confidence 357999999999953 4699999999999999999999999999999999999999999999843 21
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1542 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1542 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
+|||+||++ .+++.+|+.||+.+.....+.... +..+.++++.+++.+ ..++++.+|||||||||+||+||+.+
T Consensus 386 --~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~ 461 (552)
T TIGR03719 386 --KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKR--EVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSG 461 (552)
T ss_pred --EEEEEeCCccccCCCCcHHHHHHhhccccccCcc--hHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhC
Confidence 599999986 478889999999876433333221 223557899999964 57999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-CEEE-EecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-GQLR-CIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~-G~i~-~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|+++. + |||++|||+++++.+|||+++|++ |+++ ..|+.++.++
T Consensus 462 p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~-~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 462 GNVLLLDEPTNDLDVETLRALEEALLEFA----G-CAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHCC----C-eEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999999999999999999999999862 2 799999999999999999999987 5876 5577765543
No 25
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.5e-65 Score=718.00 Aligned_cols=215 Identities=23% Similarity=0.360 Sum_probs=186.8
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
..|+++|++++|++ +.+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+++ +...+
T Consensus 1236 g~I~f~nVsf~Y~~----~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~L 1311 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP----ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDL 1311 (1622)
T ss_pred CcEEEEEEEEEeCC----CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHH
Confidence 46999999999963 23469999999999999999999999999999999999999999999999999987 67789
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgG~kqrl 1610 (1833)
|++||++||++.||.. |+||||.++. ..++ +++.++++..++. ........+||||||||+
T Consensus 1312 R~~IsiVpQdp~LF~G-TIreNLd~~~---~~td----eei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrl 1383 (1622)
T PLN03130 1312 RKVLGIIPQAPVLFSG-TVRFNLDPFN---EHND----ADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLL 1383 (1622)
T ss_pred HhccEEECCCCccccc-cHHHHhCcCC---CCCH----HHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHH
Confidence 9999999999999975 9999997642 2222 3344555555443 333445568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+++|+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|+|++|
T Consensus 1384 aLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~-~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE~Gt~~eL 1459 (1622)
T PLN03130 1384 SLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KS-CTMLIIAHRLNTIID-CDRILVLDAGRVVEFDTPENL 1459 (1622)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CC-CEEEEEeCChHHHHh-CCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999873 33 699999999999987 999999999999999999999
Q ss_pred Hhh
Q 000224 1691 KTR 1693 (1833)
Q Consensus 1691 ~~~ 1693 (1833)
.++
T Consensus 1460 l~~ 1462 (1622)
T PLN03130 1460 LSN 1462 (1622)
T ss_pred HhC
Confidence 875
No 26
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4e-65 Score=717.07 Aligned_cols=217 Identities=23% Similarity=0.326 Sum_probs=187.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
..|+++|++++|++ +.+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ +...+
T Consensus 1233 g~I~f~nVsf~Y~~----~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~l 1308 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP----GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDL 1308 (1495)
T ss_pred CcEEEEEEEEEECC----CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHH
Confidence 35999999999953 23569999999999999999999999999999999999999999999999999976 56788
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgG~kqrl 1610 (1833)
|++|+||||++.+|+. |+||||.++. ..++ +++.++++..++. ........+||||||||+
T Consensus 1309 R~~i~iVpQdp~LF~g-TIr~NL~~~~---~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1380 (1495)
T PLN03232 1309 RRVLSIIPQSPVLFSG-TVRFNIDPFS---EHND----ADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLL 1380 (1495)
T ss_pred HhhcEEECCCCeeeCc-cHHHHcCCCC---CCCH----HHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHH
Confidence 9999999999999975 9999998642 2232 3344555555543 333445678999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+++|+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++|
T Consensus 1381 aLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~Gt~~eL 1456 (1495)
T PLN03232 1381 SLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KS-CTMLVIAHRLNTIID-CDKILVLSSGQVLEYDSPQEL 1456 (1495)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CC-CEEEEEeCCHHHHHh-CCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999863 33 689999999999987 999999999999999999999
Q ss_pred HhhcC
Q 000224 1691 KTRFG 1695 (1833)
Q Consensus 1691 ~~~~~ 1695 (1833)
.++.+
T Consensus 1457 l~~~~ 1461 (1495)
T PLN03232 1457 LSRDT 1461 (1495)
T ss_pred HhCCC
Confidence 87643
No 27
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4e-66 Score=611.90 Aligned_cols=211 Identities=28% Similarity=0.497 Sum_probs=198.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC--ccHHHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r 635 (1833)
..+++++++|.|+ ...|.+||||+|++|||+||+|+|||||||||++|.|+++||+|+|+++|+.+. .+.+++|
T Consensus 3 ~~l~~~~itK~f~----~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~ 78 (501)
T COG3845 3 PALEMRGITKRFP----GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIR 78 (501)
T ss_pred ceEEEeccEEEcC----CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHH
Confidence 4799999999995 578999999999999999999999999999999999999999999999999875 5678899
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVL---KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~---~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
..||+|+||..|++.+||.||+.++..- ..++....++++.++.++.||+-..++++.+||-||||||.|-+||..+
T Consensus 79 ~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 79 LGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred cCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999999999999999987643 2356778899999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEE
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 772 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~ 772 (1833)
|++|||||||+-|-|...++++++|++++ +|+|||++||.++|+.++|||+.||++|+++
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvv 219 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVV 219 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEE
Confidence 99999999999999999999999999996 5999999999999999999999999999964
No 28
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-66 Score=675.22 Aligned_cols=204 Identities=21% Similarity=0.389 Sum_probs=177.0
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+.+|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++.
T Consensus 310 ~~~l~~~~l~~~y~~------~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~--------- 374 (638)
T PRK10636 310 NPLLKMEKVSAGYGD------RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG--------- 374 (638)
T ss_pred CceEEEEeeEEEeCC------eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC---------
Confidence 357999999999953 46999999999999999999999999999999999999999999998641
Q ss_pred ccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1542 RRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1542 ~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
.++||++|+. .+.+..|+.+++.. .. .....+.+.++|+.+++. +..++++++|||||||||+||++|+.
T Consensus 375 -~~igy~~Q~~~~~l~~~~~~~~~~~~---~~---~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 375 -IKLGYFAQHQLEFLRADESPLQHLAR---LA---PQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred -EEEEEecCcchhhCCccchHHHHHHH---hC---chhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 2599999974 35566778776532 11 122345678899999996 46899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKT 1692 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~-~~g~~~~l~~ 1692 (1833)
+|+||||||||+|||+.+++.+.++|+++ . + |||+||||+++++.+||||++|++|+++ +.|+.++...
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~-g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF---E-G-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc---C-C-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 2 3 8999999999999999999999999997 7899988743
No 29
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.8e-64 Score=705.01 Aligned_cols=217 Identities=21% Similarity=0.304 Sum_probs=187.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
..|+++|++++|+.+ ...+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+++ +...+
T Consensus 1283 g~I~f~nVsf~Y~~~----~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~L 1358 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED----LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDL 1358 (1522)
T ss_pred CcEEEEEEEEEeCCC----CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHH
Confidence 469999999999642 2469999999999999999999999999999999999999999999999999987 66789
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCCChhHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgG~kqrl 1610 (1833)
|++|||+||++.+|+. |+||||..+. ..++ +++.++++..++. .........||||||||+
T Consensus 1359 R~~i~iVpQdp~LF~g-TIr~NLdp~~---~~sd----eei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1430 (1522)
T TIGR00957 1359 RFKITIIPQDPVLFSG-SLRMNLDPFS---QYSD----EEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLV 1430 (1522)
T ss_pred HhcCeEECCCCcccCc-cHHHHcCccc---CCCH----HHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHH
Confidence 9999999999999985 9999997542 2233 3344555555543 233445567999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+++|+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++|
T Consensus 1431 ~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1431 CLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF--ED-CTVLTIAHRLNTIMD-YTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CC-CEEEEEecCHHHHHh-CCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999863 33 689999999999886 999999999999999999999
Q ss_pred HhhcC
Q 000224 1691 KTRFG 1695 (1833)
Q Consensus 1691 ~~~~~ 1695 (1833)
.++.|
T Consensus 1507 l~~~~ 1511 (1522)
T TIGR00957 1507 LQQRG 1511 (1522)
T ss_pred HhCCC
Confidence 87633
No 30
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=9.4e-66 Score=689.79 Aligned_cols=566 Identities=30% Similarity=0.449 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHhHHHHHhHHHHHHHHHhHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccChhh
Q 000224 284 RVMGVLYLLGFLYPISRLISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQFAVSSGIITACT-MDSLFKYSDKTV 362 (1833)
Q Consensus 284 ~~~~~~~~l~~~~~~~~~v~~iv~EKe~~lke~m~~mGl~~~~~wlsw~i~~~~~~~i~~~i~~~~~-~~~~f~~s~~~~ 362 (1833)
-..++++++.+++..+..+.+.+.||+.|.|+.|+++|+++++||++|+++.++.+++..+++..+. ....+...+..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~li~e~~~~~~~~~~i~G~~~~~yw~~~~~~d~~~~~l~~~~~~~~~~~f~~~~~~~~~~ 377 (885)
T KOG0059|consen 298 LLGALFLLFVFLLLFSVFLLSLILERQQRLRHQQLIAGLSPSTYWLFALVWDLLLYLLILLILLIFVLIFGFFAGNNTVI 377 (885)
T ss_pred HHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccchHH
Confidence 3455666666777777778889999999999999999999999999999998877776655443321 112456677889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH----hhhhcc-cCCCchhHHhHHHhhhchhHHHHHHHHH
Q 000224 363 VFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLGAF----FPYYTV-NDEAVPMVLKVIASLLSPTAFALGSVNF 437 (1833)
Q Consensus 363 ~f~~~~l~~~s~i~~~f~iS~fF~~~~~a~~~~~l~~~~~~----~~~~~~-~~~~~~~~~~~~~sl~~~~a~~~~~~~~ 437 (1833)
+++++++|+.+.+.+.|++|.+|++...|..+..+..++.. +++... .....+....+...+.|++.+..+...+
T Consensus 378 ~~~~~~l~~~s~i~l~y~~s~~f~~~~~~~v~~~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~l 457 (885)
T KOG0059|consen 378 ILLLLLLYIRSAIPLTYILSFIFSKESTASVILSIYNLISGLLVFFAVFILQSFANGRTGDIFSMILVPGFTLFLPLYEL 457 (885)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCceeehhhHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999998766554433222 222211 1112222233333344444333232222
Q ss_pred HH--Hhh---ccCCccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHHhccccCCCCccccccccccccccCcccccc
Q 000224 438 AD--YER---AHVGLRWSNMWRASSGVNFLVCLLMMLLDTLLYGVIGLYLDKVLPKENGVRYRWNFIFQNCFRRKKSVIK 512 (1833)
Q Consensus 438 ~~--~e~---~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~ly~~l~~yld~v~p~~~G~~~p~~f~~~~~~w~~~~~~~ 512 (1833)
.. .+. ...|..|.++.......... +.+.+...+.+.+.+...|+..|.+|....++|.++....
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 527 (885)
T KOG0059|consen 458 SSLAAEGNLNLNDGMSLEVLGNDESFYTLL----------LEWLLPLIGRRYLALVTEGVKDDLFFLLIFVPFKRRMRAL 527 (885)
T ss_pred HHHHHHhhhcchhhhhhhhhcccccccchh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccc
Confidence 21 111 23455666654320000000 0011111111112222345555554544444443322100
Q ss_pred ccccchhHHhhhhhhhhhhhhhccccCcchhhhhhhhccccccCcceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEE
Q 000224 513 HHVSSAEVKINKKLSKEKECAFALDACEPVVEAISLDMKQQEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQIL 592 (1833)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~ 592 (1833)
.. .......+...|+..+..... .++ ..........++.++||+|.|+.+.+ |++++|+.|++|||+
T Consensus 528 ~~---~~~~~~~~~~~e~~~v~~e~~---~v~----~~~~~~~~~~~~~~~~L~k~y~~~~~---Av~~ls~~V~~gecf 594 (885)
T KOG0059|consen 528 TQ---NMLKGFEPVEVEKLDVARERN---RVE----TLLFRSSYSSALVLNNLSKVYGGKDG---AVRGLSFAVPPGECF 594 (885)
T ss_pred cc---cccCCCcCcchhhHHHHHHHH---hhh----hhhhcccccceEEEcceeeeecchhh---hhcceEEEecCCceE
Confidence 00 000000000011111000000 000 01111122357999999999975432 999999999999999
Q ss_pred EEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHH
Q 000224 593 ALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEEL 670 (1833)
Q Consensus 593 ~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~ 670 (1833)
|++|+|||||||+++||+|..+|++|+++++|+++.. +.+++++.||||||++.+|+.+|.+||+.++++++|+++.+
T Consensus 595 gLLG~NGAGKtT~f~mltG~~~~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~~d 674 (885)
T KOG0059|consen 595 GLLGVNGAGKTTTFKMLTGETKPTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTGREHLEFYARLRGLPRSD 674 (885)
T ss_pred EEecCCCCCchhhHHHHhCCccCCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccHHHHHHHHHHHcCCChhH
Confidence 9999999999999999999999999999999999976 45569999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEE
Q 000224 671 LESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIILLT 749 (1833)
Q Consensus 671 ~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-g~tiil~ 749 (1833)
+++.++++++.+||.+..+++++.+||||||||++|.|++++|++++|||||+||||.+||.+|+++++.++ |+.||+|
T Consensus 675 i~~~v~~ll~~~~L~~~~~~~~~~ySgG~kRkLs~aialig~p~vi~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLT 754 (885)
T KOG0059|consen 675 IGSAIEKLLRLVGLGPYANKQVRTYSGGNKRRLSFAIALIGDPSVILLDEPSTGLDPKARRHLWDIIARLRKNGKAIILT 754 (885)
T ss_pred HHHHHHHHHHHcCChhhhccchhhCCCcchhhHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999976 5699999
Q ss_pred cCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecC-CChhhHHHHHHHhCCCceEEeeeCcEEEEEec
Q 000224 750 THSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSA-PDASAAADIVYRHIPSALCVSEVGTEITFKLP 828 (1833)
Q Consensus 750 tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~p 828 (1833)
||.|+|++.+|||++||.+|+++|.|++++||++||.||.+++.... ++.+...+.+.+.+|++....+....+.|.+|
T Consensus 755 SHsMeE~EaLCtR~aImv~G~l~ciGs~q~LKsrfG~gy~l~~~~~~~~~~~~v~~~~~~~~p~a~~~~~~~~~~~~~ip 834 (885)
T KOG0059|consen 755 SHSMEEAEALCTRTAIMVIGQLRCIGSPQELKSRYGSGYTLTVRIKELPEVSEVEKLLQNRFPGAVLKERHAGLLAFEIP 834 (885)
T ss_pred cCCHHHHHHHhhhhheeecCeeEEecChHHHHhhcCCcEEEEEEECCCcccchHHHHHHHhCCCcchhhhhhceEEEEcc
Confidence 99999999999999999999999999999999999999999987655 33357778899999999999888888999999
Q ss_pred CCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCChHHHHHHHhcCC
Q 000224 829 LASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCN 887 (1833)
Q Consensus 829 ~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tlE~vfl~~~~~~ 887 (1833)
.+......+.|..+|.. ++.+++++|+++++||||||++++...
T Consensus 835 ~~~~~~~~~vF~~le~~---------------~~~~~i~dyslsq~tLe~VFi~~a~~q 878 (885)
T KOG0059|consen 835 KDEVVSLSEVFLALEKA---------------KESFGIEDYSLSQTTLEDVFLILAKTQ 878 (885)
T ss_pred cchhhHHHHHHHHHHHH---------------HHhcCHHHHHHHHhhHHHHHHHHhccc
Confidence 98888888899999875 347899999999999999999998753
No 31
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.5e-65 Score=657.82 Aligned_cols=198 Identities=22% Similarity=0.278 Sum_probs=174.7
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
++++++|++|.|++ . .++++||+|++||++||+||||||||||+|+|+|+++|++|+|.++
T Consensus 339 ~~l~~~~ls~~~~~------~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~------------ 399 (590)
T PRK13409 339 TLVEYPDLTKKLGD------F-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE------------ 399 (590)
T ss_pred eEEEEcceEEEECC------E-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe------------
Confidence 47899999999952 2 4999999999999999999999999999999999999999999875
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
.++||+||+..+++.+||+|++.+..... .. ...+.++++.++|.+..++++.+|||||||||+||+||+.+|++
T Consensus 400 ~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~--~~---~~~~~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 400 LKISYKPQYIKPDYDGTVEDLLRSITDDL--GS---SYYKSEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred eeEEEecccccCCCCCcHHHHHHHHhhhc--Ch---HHHHHHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 14999999988888899999998643221 11 23467889999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+|||+++|+ |++...|+
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~ 536 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEERE-ATALVVDHDIYMIDYISDRLMVFE-GEPGKHGH 536 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeee
Confidence 999999999999999999999999975444 589999999999999999999996 57776654
No 32
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.2e-63 Score=654.04 Aligned_cols=206 Identities=25% Similarity=0.350 Sum_probs=177.7
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+.+|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ |.++
T Consensus 317 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~------- 382 (635)
T PRK11147 317 KIVFEMENVNYQIDG------KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL------- 382 (635)
T ss_pred CceEEEeeeEEEECC------eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc-------
Confidence 357999999999953 46999999999999999999999999999999999999999999998 5432
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1542 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1542 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
+|||++|+. .+++.+||.||+.+........ .....+.++++.+++. +..++++++|||||||||+||+||+.+
T Consensus 383 --~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~ 458 (635)
T PRK11147 383 --EVAYFDQHRAELDPEKTVMDNLAEGKQEVMVN--GRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKP 458 (635)
T ss_pred --EEEEEeCcccccCCCCCHHHHHHhhccccccc--chHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 499999985 6888999999997643211111 1234577889999996 568999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-CCEEEE-ecChhHH
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-GGQLRC-IGSPQHL 1690 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~-~G~i~~-~g~~~~l 1690 (1833)
|++|||||||+|||+.+++.+.++|+++ + .|||++|||++++..+|||+++|+ +|++.. .|+.++.
T Consensus 459 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~-~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y 526 (635)
T PRK11147 459 SNLLILDEPTNDLDVETLELLEELLDSY----Q-GTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDA 526 (635)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHH
Confidence 9999999999999999999999999875 2 389999999999999999999998 899875 5777665
No 33
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-61 Score=679.72 Aligned_cols=215 Identities=20% Similarity=0.328 Sum_probs=186.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
..|+++||+++|+++ .+.+|+||||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+.+ +...+
T Consensus 1307 G~I~f~nVsf~Y~~~----~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~L 1382 (1560)
T PTZ00243 1307 GSLVFEGVQMRYREG----LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLREL 1382 (1560)
T ss_pred CeEEEEEEEEEeCCC----CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHH
Confidence 359999999999642 3469999999999999999999999999999999999999999999999999987 56789
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccc-----------cCCCCCCCChhHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKH-----------AKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgG~kqrl 1610 (1833)
|++|||+||++.||+. |+||||..+. ..+ ++++.++++..++.+. ......+||||||||+
T Consensus 1383 R~~I~iVpQdp~LF~g-TIreNIdp~~---~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrL 1454 (1560)
T PTZ00243 1383 RRQFSMIPQDPVLFDG-TVRQNVDPFL---EAS----SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLM 1454 (1560)
T ss_pred HhcceEECCCCccccc-cHHHHhCccc---CCC----HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHH
Confidence 9999999999999975 9999997532 222 2456666777766543 2234467999999999
Q ss_pred HHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1611 SVAIAMIGD-PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1611 ~lA~al~~~-p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
+|||||+++ |+||||||||++||+++.+.+.+.|++.. ++ +|||+++|+++.+.. ||||++|++|++++.|++++
T Consensus 1455 aLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~--~~-~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE~Gt~~e 1530 (1560)
T PTZ00243 1455 CMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF--SA-YTVITIAHRLHTVAQ-YDKIIVMDHGAVAEMGSPRE 1530 (1560)
T ss_pred HHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC--CC-CEEEEEeccHHHHHh-CCEEEEEECCEEEEECCHHH
Confidence 999999995 89999999999999999999999999863 23 689999999998875 99999999999999999999
Q ss_pred HHhh
Q 000224 1690 LKTR 1693 (1833)
Q Consensus 1690 l~~~ 1693 (1833)
|.++
T Consensus 1531 Ll~~ 1534 (1560)
T PTZ00243 1531 LVMN 1534 (1560)
T ss_pred HHhC
Confidence 9864
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.3e-60 Score=667.65 Aligned_cols=215 Identities=25% Similarity=0.407 Sum_probs=185.9
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1540 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~ 1540 (1833)
...|+++||+++|+. +.+.+|+|+||+|++||.+||+|++|||||||+++|.|+++ ++|+|.+||.|+.. ....
T Consensus 1215 ~g~I~f~nVs~~Y~~----~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~ 1289 (1490)
T TIGR01271 1215 GGQMDVQGLTAKYTE----AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQT 1289 (1490)
T ss_pred CCeEEEEEEEEEeCC----CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHH
Confidence 346999999999964 23579999999999999999999999999999999999997 89999999999976 5677
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-----------CCCCCCChhHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-----------KPSFTLSGGNKRK 1609 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LSgG~kqr 1609 (1833)
+|++|+|+||++.+|+. |+||||..+. ..+ ++++.++++..+|.+... .....||||||||
T Consensus 1290 lR~~is~IpQdp~LF~G-TIR~NLdp~~---~~t----deei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQr 1361 (1490)
T TIGR01271 1290 WRKAFGVIPQKVFIFSG-TFRKNLDPYE---QWS----DEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQL 1361 (1490)
T ss_pred HHhceEEEeCCCccCcc-CHHHHhCccc---CCC----HHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHH
Confidence 89999999999999985 9999997542 122 345566777777654322 2334799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+++|+||||||||++||+.+.+.|.+.|++.. + ++|||++||+++.+.. ||||++|++|++++.|+|++
T Consensus 1362 L~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~--~-~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~g~p~~ 1437 (1490)
T TIGR01271 1362 MCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF--S-NCTVILSEHRVEALLE-CQQFLVIEGSSVKQYDSIQK 1437 (1490)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--C-CCEEEEEecCHHHHHh-CCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999863 2 3699999999999876 99999999999999999999
Q ss_pred HHhh
Q 000224 1690 LKTR 1693 (1833)
Q Consensus 1690 l~~~ 1693 (1833)
|.++
T Consensus 1438 Ll~~ 1441 (1490)
T TIGR01271 1438 LLNE 1441 (1490)
T ss_pred HHcC
Confidence 9864
No 35
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.2e-62 Score=615.50 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=176.6
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1540 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~ 1540 (1833)
++.+++++|++|.|++ ++.+++++||.|.+|+.+||+||||+|||||+|+|+|...|.+|+|.+.- .
T Consensus 318 g~~vl~~~~~~~~y~~-----~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-~------- 384 (530)
T COG0488 318 GKLVLEFENVSKGYDG-----GRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-T------- 384 (530)
T ss_pred CCeeEEEeccccccCC-----CceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-c-------
Confidence 4568999999999964 25799999999999999999999999999999999999999999987632 1
Q ss_pred hccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1541 ARRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
-+|||.+|+. .+.++.|+.|++.-.. +. ..+..+...|.+|++. +...++++.||||||.||.+|+.++.
T Consensus 385 --v~igyf~Q~~~~l~~~~t~~d~l~~~~-----~~-~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~ 456 (530)
T COG0488 385 --VKIGYFDQHRDELDPDKTVLEELSEGF-----PD-GDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQ 456 (530)
T ss_pred --eEEEEEEehhhhcCccCcHHHHHHhhC-----cc-ccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhcc
Confidence 2499999985 4557779999886432 11 1156778899999996 56789999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEe-cChhHHHhh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCI-GSPQHLKTR 1693 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~-g~~~~l~~~ 1693 (1833)
+|++|||||||++||..+++.+.++|.++. | |||+||||.++++++|++++++.+ ++... |+.++....
T Consensus 457 ~pNvLiLDEPTNhLDi~s~~aLe~aL~~f~---G--tvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 457 PPNLLLLDEPTNHLDIESLEALEEALLDFE---G--TVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHhCC---C--eEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 999999999999999999999999999872 3 899999999999999999999998 66554 777665543
No 36
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.6e-62 Score=638.31 Aligned_cols=204 Identities=27% Similarity=0.440 Sum_probs=173.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
++|+++|+++.|++ .+.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.+++ +
T Consensus 507 ~~L~~~~ls~~y~~-----~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~----------~ 571 (718)
T PLN03073 507 PIISFSDASFGYPG-----GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA----------K 571 (718)
T ss_pred ceEEEEeeEEEeCC-----CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC----------c
Confidence 57999999999953 24589999999999999999999999999999999999999999999864 2
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHH-HH-HcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELY-AR-IKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~-~~-~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.+|||++|++ .+.+++.++..+. .. ..+.. ++.+.++++.+++. +..++++.+|||||||||+||+||+.+
T Consensus 572 ~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~~~----~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~ 645 (718)
T PLN03073 572 VRMAVFSQHH--VDGLDLSSNPLLYMMRCFPGVP----EQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKK 645 (718)
T ss_pred eeEEEEeccc--cccCCcchhHHHHHHHhcCCCC----HHHHHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcC
Confidence 3699999985 2345666664332 12 12222 34577899999997 467899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~-~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+.+.|+++ + + |||++|||++++..+|||+++|.+|+++ ..|++++.++
T Consensus 646 p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~-g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~ 714 (718)
T PLN03073 646 PHILLLDEPSNHLDLDAVEALIQGLVLF---Q-G-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKK 714 (718)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc---C-C-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHH
Confidence 9999999999999999999999888764 2 3 8999999999999999999999999998 6788877654
No 37
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-60 Score=630.79 Aligned_cols=225 Identities=22% Similarity=0.337 Sum_probs=194.4
Q ss_pred cccCCCCcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC
Q 000224 1455 VLSGSVDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI 1534 (1833)
Q Consensus 1455 v~~~~~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i 1534 (1833)
.+.+++.+..|+++|++.+|.. +...||+||||+|++||.+||+|..|||||||+++|-++.+|++|+|.|||.|+
T Consensus 1129 pp~~WP~~G~I~f~~~~~RYrp----~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI 1204 (1381)
T KOG0054|consen 1129 PPPSWPSKGEIEFEDLSLRYRP----NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDI 1204 (1381)
T ss_pred CCCCCCCCCeEEEEEeEEEeCC----CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeec
Confidence 4456677778999999999964 346799999999999999999999999999999999999999999999999999
Q ss_pred CC-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-----------cccCCCCCCC
Q 000224 1535 RS-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-----------KHAKKPSFTL 1602 (1833)
Q Consensus 1535 ~~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~L 1602 (1833)
.+ ....+|++++.+||||.||.. |+|.||.-+... ++ +++-++|++.+|. .....-..++
T Consensus 1205 ~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLDPf~e~---sD----~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~ 1276 (1381)
T KOG0054|consen 1205 SKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLDPFDEY---SD----DEIWEALERCQLKDVVSSLPGGLDSEVSEGGENF 1276 (1381)
T ss_pred ccccHHHHHhcCeeeCCCCceecC-ccccccCccccc---CH----HHHHHHHHHhChHHHHhhCCcCCCceecCCCccC
Confidence 87 678899999999999999975 999999866542 22 2333444444443 3333445689
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000224 1603 SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1682 (1833)
Q Consensus 1603 SgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~ 1682 (1833)
|-||||-|||||||+++++||+|||+|+++|+++-..+.+.|++-- .++|||.+.|+++.+.. ||||+||++|+++
T Consensus 1277 SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F---~dcTVltIAHRl~TVmd-~DrVlVld~G~v~ 1352 (1381)
T KOG0054|consen 1277 SVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF---KDCTVLTIAHRLNTVMD-SDRVLVLDAGRVV 1352 (1381)
T ss_pred ChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh---cCCeEEEEeeccchhhh-cCeEEEeeCCeEe
Confidence 9999999999999999999999999999999999999999999843 34799999999999998 9999999999999
Q ss_pred EecChhHHHhhcC
Q 000224 1683 CIGSPQHLKTRFG 1695 (1833)
Q Consensus 1683 ~~g~~~~l~~~~~ 1695 (1833)
+.|+|++|.++.+
T Consensus 1353 EfdsP~~Ll~~~~ 1365 (1381)
T KOG0054|consen 1353 EFDSPAELLSDKD 1365 (1381)
T ss_pred ecCChHHHHhCCc
Confidence 9999999987644
No 38
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-54 Score=559.86 Aligned_cols=816 Identities=20% Similarity=0.294 Sum_probs=495.3
Q ss_pred cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC---CcceEEEcCccCCccHHHhhcceEEEccCCCCCCCC
Q 000224 575 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP---TTGDALVFGKNITADMDEIRKGLGVCPQYDILFPEL 651 (1833)
Q Consensus 575 ~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p---~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~l 651 (1833)
...+++|+|.-+++|+.+.++||.|||||||++.|+|-++- ..|+|..+|++...... ++.++|++|+++.++.|
T Consensus 127 ~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~--~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 127 KIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVP--KKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred cceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCccccccc--CceEEecccccccccee
Confidence 35799999999999999999999999999999999998764 35799999998865433 77899999999999999
Q ss_pred CHHHHHHHHHHhcCC-------CHHH-HHHHHHHHHHHcCCCccccccc-----CCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 652 TVREHLEMFAVLKGV-------KEEL-LESVVAEMVDEVGLADKVNIVV-----RALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 652 Tv~e~l~~~~~~~~~-------~~~~-~~~~v~~~l~~~~L~~~~~~~~-----~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
||+|.|.|.++.++. ++.+ ..+..+.+++.+||++..|+.+ +-.|||||+||++|-+++++++++++
T Consensus 205 TVreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred EEeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeee
Confidence 999999999998864 1221 2225678999999998877766 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCH-HHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC-CcEEEEEEe
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSM-DEAEELGDRIAIMANGSLKCCGSSLFLKHQYG-VGYTLTLVK 794 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~-~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g-~gy~l~~~~ 794 (1833)
||+|.|||..+.-++.+.|+++.+ +.|.+++=|.. +++-.+-|.|.+|.+|+++.+|+.++.+.-+. .||. +.
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~--cP- 361 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFK--CP- 361 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCcc--CC-
Confidence 999999999999999999999853 77877777776 78888999999999999999999988876553 3553 11
Q ss_pred cCCChhhHHHHHHHhCCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCC
Q 000224 795 SAPDASAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVT 874 (1833)
Q Consensus 795 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 874 (1833)
......+++.+- ..-+...+...+-.-..|......+.+.+...+..
T Consensus 362 ---~r~~~ADfLt~v-ts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~----------------------------- 408 (1391)
T KOG0065|consen 362 ---PRKGTADFLTEV-TSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDY----------------------------- 408 (1391)
T ss_pred ---CccCHHHHHHHh-hcCccccccccccCCCcccCCHHHHHHHHhcchhh-----------------------------
Confidence 111222232221 11000000000000001111111122221111110
Q ss_pred ChHHHHHHHhcCCCcchhhhhhccccccccccccccCCCCccccccccccCCcccccceeeeeecchhhhhhHHhhhhhh
Q 000224 875 TLEEVFLRVAGCNLDESECISQRNNLVTLDYVSAESDDQAPKRISNCKLFGNYKWVFGFIVTVVQRACTLIVAAVLGFLN 954 (1833)
Q Consensus 875 tlE~vfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1833)
.++... -+ ...++.... ....
T Consensus 409 ------~~l~~~----------l~---------~~~~~~k~~--~~al-------------------------------- 429 (1391)
T KOG0065|consen 409 ------AKLKKE----------LS---------KPYDKSKKH--KAAL-------------------------------- 429 (1391)
T ss_pred ------HHHHHH----------hc---------chhhhhhcc--chhh--------------------------------
Confidence 000000 00 000000000 0000
Q ss_pred hhcccccccccccchhHHHHHHHHHHHHHhHhccchhHHHHHHHHHHHHHHH-HHHHHhccCCCCCCccccccccCCCcc
Q 000224 955 FLIKKCCTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFLLV-GLLFLKLKPHPDMLSVTFTTSNFNPLL 1033 (1833)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~q~~al~~Kr~~~~~R~~~~~~~~l~lP~~~~~~-~l~~~~~~~~~~~~~~~l~~~~~~~~~ 1033 (1833)
....-...+|.|+++.+++-++..+||...+++..+.+++..++ +-++.+.. .. ++.
T Consensus 430 --------~s~~y~v~~~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~-~~-------t~~------ 487 (1391)
T KOG0065|consen 430 --------VSSKYSVPYWEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTP-MS-------TTS------ 487 (1391)
T ss_pred --------cCCceeccHHHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeecc-Cc-------ccc------
Confidence 00001235799999999999999999999888887776654332 22222110 00 000
Q ss_pred CCCCCCCCcccccCchhhhhhhhhhcCCcccccccCCCCCCChHHHHHHHHHhcCCCCcchhhchhHHHHHhhhhcccce
Q 000224 1034 SGGGGGGPIPFDLSWPIANEVSKYIQGGWIQRFKQSSYRFPNAEKALADAVDAAGPTLGPVLLSMSEYLMSSFNESYQSR 1113 (1833)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1113 (1833)
++ +
T Consensus 488 --------------------------~~---------------------------------------~------------ 490 (1391)
T KOG0065|consen 488 --------------------------GG---------------------------------------Y------------ 490 (1391)
T ss_pred --------------------------cc---------------------------------------h------------
Confidence 00 0
Q ss_pred ecEEEeeccCCCCceeEEEEeCCCCCChHHHHHHHHHHHHHHHhcCCCcceEEEEeecCCCchhhhhhhcchhhhHHHHH
Q 000224 1114 YGAIVMDDQNDDGSLGFTVLHNSSCQHAGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSVSII 1193 (1833)
Q Consensus 1114 ~~~~~~~~~~~~~~~~~~~~~n~~~~hs~p~~ln~~~nailr~~~~~~~~~I~~~~~Plp~~~~~~~~~~~~~~~~~~~~ 1193 (1833)
..++..+..++ ++
T Consensus 491 -------------------------~~~~~lffsll------------------------------------------~~ 503 (1391)
T KOG0065|consen 491 -------------------------SRGGALFFALL------------------------------------------FN 503 (1391)
T ss_pred -------------------------hhhhHHHHHHH------------------------------------------HH
Confidence 00000000000 00
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHhHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccccccCchHHHH
Q 000224 1194 ISIAFSFIPASFAVAIVKEREVKAKQQQLISGVSVLSYWTSTYIWDFISFLFPSSC-AIILFYIFGLDQFVGRGCLLPTV 1272 (1833)
Q Consensus 1194 i~~~~s~i~a~f~~~~V~ER~~k~k~lq~vsGv~~~~YW~s~~l~D~i~~li~~~~-~iii~~~f~~~~~~~~~~~~~~~ 1272 (1833)
...+++=++..|.-.+|.+|+. -.+=..+++|=++..+.|+..-++.+++ .+++++..++.. ..+.++..+
T Consensus 504 ~f~~laEi~~~~~~~pv~~Khr------~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~--~A~rFF~~f 575 (1391)
T KOG0065|consen 504 LFNGLAEIALTFQRLPVFYKHR------DLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKR--NAGRFFIQF 575 (1391)
T ss_pred HHHhHHHHHHHHhhcchHHHhh------cccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCc--chHHHHHHH
Confidence 0111111222233333333322 1233578899999999998876655544 444444544331 223344444
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcccchhhhhHHHH
Q 000224 1273 LIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLLEATRSANSLLKNFFRLSPGFCFADGLAS 1352 (1833)
Q Consensus 1273 ll~llyG~a~i~~~Yl~Sf~f~~~~~a~~~~~~i~~~~g~~~~i~~~il~~~~~~~~~~~~l~~~f~l~P~~~l~~gl~~ 1352 (1833)
+++++.-.++..+-=+++-...+...| +.+.|+..+++...-+..-........++|+..+.|.---..+++.
T Consensus 576 L~lf~~~~~~s~lFr~ia~l~~t~~~A-------n~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~ 648 (1391)
T KOG0065|consen 576 LFLFLCQFCMSGLFRFIASLSRTLSIA-------NLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMS 648 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHH-------hhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHH
Confidence 444444444443333333333333222 2333333332222222222223444566777777774222222222
Q ss_pred HHHhhh----c------------ccCC----------------C------CCCccccccchhhHHHHHHHHHHHHHHHHH
Q 000224 1353 LALLRQ----G------------MKDK----------------T------SDGVFDWNVTSASICYLGCESICYFLLTLG 1394 (1833)
Q Consensus 1353 l~~~~~----~------------~~~~----------------~------~~~~~~~~~~g~~i~~l~~~~i~~~lL~l~ 1394 (1833)
-..... . ...+ . .+..+-|-..|+.++|.+.-.+++.+++-+
T Consensus 649 NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~y 728 (1391)
T KOG0065|consen 649 NEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEY 728 (1391)
T ss_pred hhhhcccCCCCCCCCcccccccccccchhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHh
Confidence 111100 0 0000 0 011234555566666665444444333333
Q ss_pred HHhccCcchhhhhHhhhhccccccccCCCCCCCcccccCCCCCCcCCCCCChhhHHHHhhcc----cCCCCcceEEEEeE
Q 000224 1395 LELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDTLDLNEDIDVQVERNRVL----SGSVDNAIIYLRNL 1470 (1833)
Q Consensus 1395 le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed~dV~~E~~rv~----~~~~~~~~l~v~~l 1470 (1833)
+..... +.... .+++.+... .+....... ..+..+|...+.++..+. .....+.+...+|+
T Consensus 729 l~p~~~-~~~~l----~~~~~~~~~--------~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl 793 (1391)
T KOG0065|consen 729 LKPLKK-SGAIL----VFKKGKEKK--------KVKSAGSSS--EIEKLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDL 793 (1391)
T ss_pred cCcccc-cccee----eeccchhhh--------cchhccccc--cccccccccccccccccCCCccccccccceEEEEeC
Confidence 221100 00000 000000000 000000000 000000000000111110 01123345666677
Q ss_pred EEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--CCceEEEEcCeeCCCChHHhccceEEE
Q 000224 1471 RKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--PTDGTAFIFGKDIRSDPKAARRLIGYC 1548 (1833)
Q Consensus 1471 ~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~--p~~G~i~i~G~~i~~~~~~~~~~ig~~ 1548 (1833)
.+.-+.. .+++..|+||+=-++||-..||+|++|||||||+++|+|-.. -.+|+|.|+|.+... +..+|.+|||
T Consensus 794 ~~~~~~q--G~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q--~tF~R~~GYv 869 (1391)
T KOG0065|consen 794 PYEMPIQ--GGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ--ETFARVSGYV 869 (1391)
T ss_pred Ccccccc--ccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch--hhhcccccee
Confidence 6655322 145779999999999999999999999999999999999743 246999999998653 5678889999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHc---CCChhhHHHHHHHHHHHcCCccccCCCCCC----CChhHHHHHHHHHHHhcCC-
Q 000224 1549 PQFDALLEYLTVQEHLELYARIK---GVAEYRMDDVVMEKLVEFDLLKHAKKPSFT----LSGGNKRKLSVAIAMIGDP- 1620 (1833)
Q Consensus 1549 pQ~~~l~~~lTv~e~l~~~~~~~---g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~----LSgG~kqrl~lA~al~~~p- 1620 (1833)
-|+|...+.+||||-|.+.|.+| .++.++..+.++++++.++|++.+|..++. ||.+||+||.||.-|+.+|
T Consensus 870 qQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G~GLs~eQRKrLTIgVELvA~P~ 949 (1391)
T KOG0065|consen 870 EQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPGSGLSTEQRKRLTIGVELVANPS 949 (1391)
T ss_pred ecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCCCCCCHHHhceeeEEEEEecCCc
Confidence 99998889999999999999887 345555567899999999999888887777 9999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHH-HHHHHcCEEEEEE-CCEEEEecChhH
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMN-EAQALCTRIGIMV-GGQLRCIGSPQH 1689 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~-e~~~l~drv~im~-~G~i~~~g~~~~ 1689 (1833)
.||+|||||||||.++.-.+.+.+++++. .| .||+.|-|... ++-+--||+++|+ .|+.+..|++.+
T Consensus 950 ~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tG-qtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 950 SILFLDEPTSGLDSQAAAIVMRFLRKLAD-TG-QTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred eeEEecCCCCCccHHHHHHHHHHHHHHHh-cC-CeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999999974 56 58999999865 3344479999996 578999998754
No 39
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-52 Score=448.99 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=208.6
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~ 636 (1833)
.|+++||+|+|+ +..+|+|+|++|++||+++|+||+||||||||++|.|+.+|++|+|.++|.++.. +..++|+
T Consensus 2 mi~i~~l~K~fg----~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~ 77 (240)
T COG1126 2 MIEIKNLSKSFG----DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRR 77 (240)
T ss_pred eEEEEeeeEEeC----CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHH
Confidence 589999999994 5679999999999999999999999999999999999999999999999987743 6778999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFA-VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~-~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
++|+|||+..|||.+||.||+.+.. ..+|.+++++++++.++|+++||.++.+.++.+|||||||||+|||||+.+|++
T Consensus 78 ~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 78 KVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred hcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999998764 568999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+++|||||+|||+...++.+.+++++ +|.|+|++||+|.+|.++||||+.|++|++++.|+|+++-.
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~ 225 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFD 225 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhc
Confidence 99999999999999999999999996 59999999999999999999999999999999999987643
No 40
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-52 Score=451.79 Aligned_cols=297 Identities=27% Similarity=0.463 Sum_probs=246.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
++++++|+|+|+ ++.||+|+||+|++||++|++|||||||||++|||.|+++||+|+|.++|.+++. ..+.
T Consensus 2 ~L~ie~vtK~Fg------~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~---~~~~ 72 (300)
T COG4152 2 ALEIEGVTKSFG------DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ---EIKN 72 (300)
T ss_pred ceEEecchhccC------ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh---hhhh
Confidence 589999999995 5789999999999999999999999999999999999999999999999998863 4567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+|||+|.+.+||+.+||.|.|.|+++++|++.+++++.+..+|+++++..+..+++.+||.||+||+.+..|++++|+++
T Consensus 73 rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLl 152 (300)
T COG4152 73 RIGYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELL 152 (300)
T ss_pred hcccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCeEEEEEe
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 1703 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~~~~~~~~ 1703 (1833)
|||||+|||||.+.+.+.+.|.+++ ++| .|||++||.|+-+|.+|||+++|++|+.+..|+.+++++.+|....+ +.
T Consensus 153 ILDEPFSGLDPVN~elLk~~I~~lk-~~G-atIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gkk~~~-ie 229 (300)
T COG4152 153 ILDEPFSGLDPVNVELLKDAIFELK-EEG-ATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGKKRLV-IE 229 (300)
T ss_pred EecCCccCCChhhHHHHHHHHHHHH-hcC-CEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCCceEE-Ee
Confidence 9999999999999999999999996 455 69999999999999999999999999999999999999999864322 22
Q ss_pred ecCCccccHHHHHHHHHhhcccCCcchhhhhhhhhhhhccccccccCCCceeeecchHHHHHHHHHhhccccceeEeEec
Q 000224 1704 PTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEMLLIVGRWLGNEERIKTLISS 1783 (1833)
Q Consensus 1704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1783 (1833)
.. ...+.+. .+|..... . ...++.-..++.-++. -..+-+....+.-|+++..+
T Consensus 230 s~----~s~eeL~--------~ipgi~~~------------~-~~~~G~~~i~ie~e~~-a~~ifq~~a~~g~i~~Fe~~ 283 (300)
T COG4152 230 SD----LSLEELA--------NIPGILKI------------T-ETKDGSWRIQIENETV-AREIFQEVARDGYIQRFELQ 283 (300)
T ss_pred cc----CchHHHh--------cCCCceee------------e-eccCCceEeecccchH-HHHHHHHHhccceeEEEeec
Confidence 11 1111111 22211110 0 0111111112221122 22333333356678999999
Q ss_pred CCChhhHHHHhhccc
Q 000224 1784 SSSPDRIFGEQLSEQ 1798 (1833)
Q Consensus 1784 ~~sl~~vf~~~t~~~ 1798 (1833)
.|||+|+|++.+|.+
T Consensus 284 ~PsL~diFi~~~g~~ 298 (300)
T COG4152 284 EPSLHDIFIEKVGGV 298 (300)
T ss_pred CCCHHHHHHHHhccc
Confidence 999999999999875
No 41
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-53 Score=446.44 Aligned_cols=225 Identities=34% Similarity=0.528 Sum_probs=214.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
||++.+++|+|+. ...|++||||++++||++||+|||||||||++|||++++.|++|.|+++|.|..+++..+|+
T Consensus 1 Ml~v~~l~K~y~~-----~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr 75 (245)
T COG4555 1 MLEVTDLTKSYGS-----KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRR 75 (245)
T ss_pred CeeeeehhhhccC-----HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhh
Confidence 5889999999974 34599999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+||+++....+|..||++|||.|+++++|+...+++++++++.++++|.+.+|++++.||.||||||+|||||+++|+++
T Consensus 76 ~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~ 155 (245)
T COG4555 76 KIGVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSIL 155 (245)
T ss_pred hcceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeE
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
+|||||||||..+++.+.+.|++++ +.| .+||++||+|+|++++||||+++++|+++..|+++++..+.+
T Consensus 156 vlDEP~sGLDi~~~r~~~dfi~q~k-~eg-r~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 156 VLDEPTSGLDIRTRRKFHDFIKQLK-NEG-RAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred EEcCCCCCccHHHHHHHHHHHHHhh-cCC-cEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 9999999999999999999999985 344 589999999999999999999999999999999999987644
No 42
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-52 Score=452.09 Aligned_cols=221 Identities=34% Similarity=0.544 Sum_probs=211.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.|+++||+|.|. ++.||+|+||+|++||+++++||+||||||+|+||.++++||+|+|+++|.++.. +..+.|++
T Consensus 1 MI~~~nvsk~y~----~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~ 76 (309)
T COG1125 1 MIEFENVSKRYG----NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRK 76 (309)
T ss_pred CceeeeeehhcC----CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHh
Confidence 378999999995 4579999999999999999999999999999999999999999999999999975 77889999
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD--KVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~--~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
||||-|...|||++||.||+.+...++|.++++++++++++|+.+||+. +.++++++|||||||||.+||||+.+|++
T Consensus 77 IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 77 IGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 9999999999999999999999999999999999999999999999974 78999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
+++|||+++|||.+|.++.+.++++++ |+|||++||||+||..+||||++|++|+++..|+|+++.++
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 999999999999999999999999864 99999999999999999999999999999999999988754
No 43
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-51 Score=440.88 Aligned_cols=222 Identities=28% Similarity=0.467 Sum_probs=208.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC--ChHHh
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS--DPKAA 1541 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~--~~~~~ 1541 (1833)
+|+++||+|+|| +..+|+|||++|++||++.|+||+|||||||+|+|.|+.+|++|+|.++|.++.. +..+.
T Consensus 2 mi~i~~l~K~fg------~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFG------DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeC------CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 689999999996 4679999999999999999999999999999999999999999999999987743 45678
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHH-HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYA-RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
|+++|+|+|+..|||.+||.||+.+.. ..+|.+++++++.+.++|+++||.++++.+|.+|||||||||+|||||+.+|
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P 155 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDP 155 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCC
Confidence 999999999999999999999998754 4579999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+++++|||||+|||+...++.+.++++++ +| .|.|++||+|.++..+||||+.|++|++++.|+|+++...
T Consensus 156 ~vmLFDEPTSALDPElv~EVL~vm~~LA~-eG-mTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 156 KVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred CEEeecCCcccCCHHHHHHHHHHHHHHHH-cC-CeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999999974 55 7999999999999999999999999999999999998754
No 44
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-50 Score=478.07 Aligned_cols=290 Identities=37% Similarity=0.652 Sum_probs=241.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++||+|+|++ ++.||+||||+|++||++||+||||||||||+|+|+|+.+|++|+|.++|.++..+..+.++
T Consensus 4 ~i~~~~l~k~~~~-----~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~ 78 (293)
T COG1131 4 VIEVRNLTKKYGG-----DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRR 78 (293)
T ss_pred eeeecceEEEeCC-----CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHh
Confidence 5789999999962 36799999999999999999999999999999999999999999999999999877778899
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+|||+||++.+++.+||+|||.+++.+++.+....+++++++++.++|.+..++++++||+||||||+||+||+++|++|
T Consensus 79 ~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 79 RIGYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred heEEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999999999876556678999999999998778999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCeEEEEEe
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNFLELEVK 1703 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~~~~~~~~ 1703 (1833)
||||||+||||.+++.+|++|++++++ |++||+++||.++|++.+||||++|++|++++.|+++++...++....+...
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~~~~~~~~~ 237 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFGGKGVIELE 237 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhccCceEEEe
Confidence 999999999999999999999999754 4479999999999999999999999999999999999998887654433332
Q ss_pred ecCCccccHHHHHHHHHhhcccCCcchhhhhhhhhhhhccccccccCCCceeeecchHHHHHHHHHhhccccceeEeEec
Q 000224 1704 PTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVCIGGIDSISSENATAAEISLSQEMLLIVGRWLGNEERIKTLISS 1783 (1833)
Q Consensus 1704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1783 (1833)
..... . .. . ... . .... + .............+...+..+...
T Consensus 238 ~~~~~-~--~~---~-~~~---~---------------~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~~ 279 (293)
T COG1131 238 PERLE-L--AE---L-LEG---L---------------KLVK-----G--------EEELAEILEALLEEGVKIESIEVK 279 (293)
T ss_pred ccccc-c--hh---h-hhc---c---------------cccc-----c--------chhHHHHHHHHHHcCCceeeeecC
Confidence 21100 0 00 0 000 0 0000 0 122223333344456666788999
Q ss_pred CCChhhHHHHhhcc
Q 000224 1784 SSSPDRIFGEQLSE 1797 (1833)
Q Consensus 1784 ~~sl~~vf~~~t~~ 1797 (1833)
.++|+++|+.++++
T Consensus 280 ~~~l~~~~~~~~~~ 293 (293)
T COG1131 280 EPSLEDVFLELTGR 293 (293)
T ss_pred CCCHHHHHHHHccC
Confidence 99999999998863
No 45
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-51 Score=434.74 Aligned_cols=223 Identities=32% Similarity=0.524 Sum_probs=215.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
+++.+|+|+|++ .+.|++|+||++++|||+||+|+|||||||+|+||++++.|++|.|+++|.|...++...|++||
T Consensus 2 l~v~~l~K~y~~---~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS---KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC---HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcc
Confidence 789999999975 34599999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
+++-+..++..||++|||.|++++.|+.+.+++++++++.+.++|.+.+|++++.||-||||||+|||||+++|++++||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlD 158 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLD 158 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEc
Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
|||||||..+++.+.+.+++++. |++||++||.|+|++.+||||+++++|+++..|++..++.+.+
T Consensus 159 EP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 159 EPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred CCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 99999999999999999999985 9999999999999999999999999999999999999887654
No 46
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-51 Score=445.71 Aligned_cols=223 Identities=34% Similarity=0.542 Sum_probs=213.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
||+++|++|+|+ ++.||+|+||+|++||++.++||+||||||++|||.++++||+|+|+++|++++. +..++|
T Consensus 1 MI~~~nvsk~y~------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LR 74 (309)
T COG1125 1 MIEFENVSKRYG------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELR 74 (309)
T ss_pred CceeeeeehhcC------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHH
Confidence 578999999996 4679999999999999999999999999999999999999999999999999987 678899
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc--cccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL--KHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~--~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++|||+-|..+|||++||.||+.+.-.+.|.++++++++++++|+.+||. ++++|++++|||||||||.+||||+.+|
T Consensus 75 r~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 75 RKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred HhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999997 4899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+||+||||+++|||.+|..+.+.++++.++-| +|||++||||+|+..++|||++|++|+++..++|+++..+
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 99999999999999999999999999987665 6899999999999999999999999999999999998764
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-51 Score=457.42 Aligned_cols=223 Identities=30% Similarity=0.500 Sum_probs=211.0
Q ss_pred eEEEEeeEEEecC-CCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHH
Q 000224 559 CIQIRKLHKVYAT-KRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDE 633 (1833)
Q Consensus 559 ~i~i~~l~k~y~~-~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~ 633 (1833)
.|++++|+|.|.. +.+...||+|+||+|++|||+||+|++|||||||++++.|+.+|++|+|.++|.++.. ...+
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 3789999999987 3335689999999999999999999999999999999999999999999999998852 5678
Q ss_pred hhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 634 IRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
.|++||++|||..|+...||+||++|..++.|.+++++++++.++|+.+||+++.++++.+|||||||||+|||||+.+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P 160 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNP 160 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+||+.|||||+|||.+.+.+.++|+++.+ |-||+++||.||.+..+|||+++|++|++++.|+..++-
T Consensus 161 ~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 161 KILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred CEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999953 999999999999999999999999999999999976653
No 48
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-49 Score=475.42 Aligned_cols=225 Identities=40% Similarity=0.641 Sum_probs=209.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
.+++++||+|+|+ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+
T Consensus 6 ~~i~i~~l~k~~~------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYG------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEEC------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 5799999999995 3569999999999999999999999999999999999999999999999999977666678
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
++||||||++.+++.+|++||+.+++..+|.+..+..+++.++++.++|.+..++++++|||||||||+||+||+++|++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~l 159 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDV 159 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCE
Confidence 89999999999999999999999988888877666667788999999999899999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
|||||||+||||.+++.+|++|++++ ++| +|||++||+++|++.+||||++|++|++++.|++++++++..
T Consensus 160 llLDEPt~gLD~~~~~~l~~~l~~l~-~~g-~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~ 230 (306)
T PRK13537 160 LVLDEPTTGLDPQARHLMWERLRSLL-ARG-KTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEI 230 (306)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHH-hCC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhccC
Confidence 99999999999999999999999996 344 689999999999999999999999999999999999987643
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=455.53 Aligned_cols=228 Identities=28% Similarity=0.481 Sum_probs=213.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC----ChH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS----DPK 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~----~~~ 1539 (1833)
||++++++|.|+.+ ..+...||+||||+|++|||+||+|.+|||||||+|++.++.+|++|+|.++|.++.. ...
T Consensus 1 mI~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr 79 (339)
T COG1135 1 MIELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELR 79 (339)
T ss_pred CeEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHH
Confidence 58999999999864 2245679999999999999999999999999999999999999999999999998864 235
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..|++||+++|+..|+...||.||+.|...+.|.+++++++++.++|+.+||.+++++++.+|||||||||+|||||+.+
T Consensus 80 ~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~ 159 (339)
T COG1135 80 QLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANN 159 (339)
T ss_pred HHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|+||+.|||||+|||++.+.+.++|++++++.| .||+++||.|+-+..+||||++|++|++++.|+..++...
T Consensus 160 P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 160 PKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred CCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 999999999999999999999999999987765 8999999999999999999999999999999999887653
No 50
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.1e-48 Score=470.51 Aligned_cols=228 Identities=38% Similarity=0.629 Sum_probs=209.3
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHH
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKA 1540 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~ 1540 (1833)
...+|+++||+|+|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++......
T Consensus 38 ~~~~i~i~nl~k~y~------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~ 111 (340)
T PRK13536 38 STVAIDLAGVSKSYG------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARL 111 (340)
T ss_pred CceeEEEEEEEEEEC------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHH
Confidence 446899999999995 35699999999999999999999999999999999999999999999999998765566
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
.++.|||+||++.+++.+|++||+.+++..++.+..+..++++++++.++|.+..++++++|||||||||+||+||+++|
T Consensus 112 ~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P 191 (340)
T PRK13536 112 ARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDP 191 (340)
T ss_pred HhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCC
Confidence 78899999999999999999999998888877665555667788999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCC
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 1696 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~ 1696 (1833)
++|||||||+||||.+++.+|++|+++++ +| +|||++||++++++.+||||++|++|++++.|++++++++...
T Consensus 192 ~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g-~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~ 265 (340)
T PRK13536 192 QLLILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDEHIG 265 (340)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhccC
Confidence 99999999999999999999999999964 44 5899999999999999999999999999999999999876543
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-48 Score=463.34 Aligned_cols=229 Identities=43% Similarity=0.736 Sum_probs=214.7
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.++++||+|.|+. ++.||+||||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..+..+.|++|
T Consensus 4 ~i~~~~l~k~~~~---~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG---DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC---CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhhe
Confidence 5889999999952 3579999999999999999999999999999999999999999999999999987777889999
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
||+||++.+++.+||+|||.|++.+++.+.+..+++++++++.+||.+..++++++||+||||||+||+||+++|++|||
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999987666678999999999999877899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhC-C-cEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEE
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIKK-G-RIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTL 790 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~~-g-~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l 790 (1833)
||||+||||.+|+.+|++|+++++ | +||+++||.++|++.+||||++|++|+++++|++.+++..++.....
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~~~~~~ 234 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFGGKGVI 234 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhccCceE
Confidence 999999999999999999999964 5 89999999999999999999999999999999999999887765443
No 52
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.4e-48 Score=463.45 Aligned_cols=230 Identities=36% Similarity=0.594 Sum_probs=213.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++||+|.|+ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.....+.|++
T Consensus 6 ~~i~i~~l~k~~~----~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYG----DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQR 81 (306)
T ss_pred ceEEEEeEEEEEC----CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhc
Confidence 4699999999995 356999999999999999999999999999999999999999999999999987655667889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
||||||++.+++.+||+||+.+++..+|.+..+.+++++++++.++|.+..++++++||||||||++||+||+++|++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999998888888777777889999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEE
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLT 791 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~ 791 (1833)
|||||+||||.+|+++|++|++++ +|+|||++||+++|++.+||||++|++|++++.|++.++++.......+.
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~ 236 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEIGCDVIE 236 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhccCCCeEEE
Confidence 999999999999999999999986 58999999999999999999999999999999999999987754443333
No 53
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.1e-49 Score=424.56 Aligned_cols=294 Identities=27% Similarity=0.494 Sum_probs=250.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
++++++|+|+| +++.||+|+||++++|+|+|++|||||||||+++||.|+++||+|+|.++|.+++. ..+.+|
T Consensus 2 ~L~ie~vtK~F----g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~---~~~~rI 74 (300)
T COG4152 2 ALEIEGVTKSF----GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ---EIKNRI 74 (300)
T ss_pred ceEEecchhcc----CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh---hhhhhc
Confidence 48899999999 45679999999999999999999999999999999999999999999999998864 456789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
||.|.+..|++.+||.|.|.|+++++|++.++++++++.+|+++++..+..+++.+||-|++||+++-.|++++|+++||
T Consensus 75 GyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 75 GYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred ccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecCC
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAP 797 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~~ 797 (1833)
|||+|||||.+.+.+.+.+.+++ +|.|||++||.|+.++++||++++|++|+.+..|+....++.||.--. .+. ...
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gkk~~-~ie-s~~ 232 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGKKRL-VIE-SDL 232 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCCceE-EEe-ccC
Confidence 99999999999999999999997 599999999999999999999999999999999999999999987432 222 221
Q ss_pred ChhhHHHHHHHhCCCceEEeee-CcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCCh
Q 000224 798 DASAAADIVYRHIPSALCVSEV-GTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTL 876 (1833)
Q Consensus 798 ~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tl 876 (1833)
..++ ...+|+....... .+..... .++......+|+.+.. ..-|..|.+..+||
T Consensus 233 s~ee-----L~~ipgi~~~~~~~~G~~~i~--ie~e~~a~~ifq~~a~------------------~g~i~~Fe~~~PsL 287 (300)
T COG4152 233 SLEE-----LANIPGILKITETKDGSWRIQ--IENETVAREIFQEVAR------------------DGYIQRFELQEPSL 287 (300)
T ss_pred chHH-----HhcCCCceeeeeccCCceEee--cccchHHHHHHHHHhc------------------cceeEEEeecCCCH
Confidence 1111 2345665544432 2222222 2333344556655433 35688999999999
Q ss_pred HHHHHHHhcC
Q 000224 877 EEVFLRVAGC 886 (1833)
Q Consensus 877 E~vfl~~~~~ 886 (1833)
+|+|+--++.
T Consensus 288 ~diFi~~~g~ 297 (300)
T COG4152 288 HDIFIEKVGG 297 (300)
T ss_pred HHHHHHHhcc
Confidence 9999966543
No 54
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.6e-49 Score=464.67 Aligned_cols=204 Identities=23% Similarity=0.323 Sum_probs=168.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
+++.+.|+++.|.+ +..++++++|.|+.++.++++||||||||||+|+++|++.|+.|.|.-.- .
T Consensus 388 pvi~~~nv~F~y~~-----~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~----------H 452 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD-----NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS----------H 452 (614)
T ss_pred CeEEEeccccCCCC-----cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc----------c
Confidence 57889999999964 23689999999999999999999999999999999999999999975432 2
Q ss_pred cceEEEecC--CCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1543 RLIGYCPQF--DALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1543 ~~ig~~pQ~--~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++++.-|+ ..+.-+.++-|++. .. .++....+.+..+|.++||+ +..+.+.++||+|||+||.+|++++..
T Consensus 453 ~~~~~y~Qh~~e~ldl~~s~le~~~---~~--~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kq 527 (614)
T KOG0927|consen 453 NKLPRYNQHLAEQLDLDKSSLEFMM---PK--FPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQ 527 (614)
T ss_pred ccchhhhhhhHhhcCcchhHHHHHH---Hh--ccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcC
Confidence 236666676 34444567766653 21 12223356678899999998 667899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE-EecChhHHH
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR-CIGSPQHLK 1691 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~-~~g~~~~l~ 1691 (1833)
|.+|+|||||+|||..+...+.+.|.++ .| +||++|||+..+..++++|.+..+|.+. ..|+...-+
T Consensus 528 P~lLlLDEPtnhLDi~tid~laeaiNe~---~G--gvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk 595 (614)
T KOG0927|consen 528 PHLLLLDEPTNHLDIETIDALAEAINEF---PG--GVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYK 595 (614)
T ss_pred CcEEEecCCCcCCCchhHHHHHHHHhcc---CC--ceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHH
Confidence 9999999999999999999999999886 23 5999999999999999999999998875 456654433
No 55
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.4e-47 Score=460.00 Aligned_cols=231 Identities=37% Similarity=0.588 Sum_probs=212.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||+|.|+ ++.||+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++.
T Consensus 40 ~~i~i~nl~k~y~----~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 40 VAIDLAGVSKSYG----DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred eeEEEEEEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 4699999999995 346999999999999999999999999999999999999999999999999987655667889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+|||||++.+++.+||.||+.+++..++.+..+.+++++++++.+||.+..++++++||||||||++||+||+++|++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLi 195 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLI 195 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999988877777666667788899999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEE
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTL 792 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~ 792 (1833)
|||||+||||.+|+++|++|++++ +|+|||++||++++++.+||||++|++|++++.|++.++++.+...+...+
T Consensus 196 LDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~~ 271 (340)
T PRK13536 196 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDEHIGCQVIEI 271 (340)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhccCceEEEE
Confidence 999999999999999999999986 589999999999999999999999999999999999999887655444433
No 56
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-48 Score=425.18 Aligned_cols=221 Identities=33% Similarity=0.566 Sum_probs=208.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~ 633 (1833)
..|++++|+|+| |++.+++|+||+|++||+++++|++|+|||||+++|.|+++|++|+|.++|.++.. ...+
T Consensus 7 ~~I~vr~v~~~f----G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 7 PLIEVRGVTKSF----GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred ceEEEeeeeeec----CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 579999999999 45679999999999999999999999999999999999999999999999999853 4457
Q ss_pred hhcceEEEccCCCCCCCCCHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCChhHHHHHHHHHHHhC
Q 000224 634 IRKGLGVCPQYDILFPELTVREHLEMFAVL-KGVKEELLESVVAEMVDEVGLADK-VNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~-~~~~~~~~~~~v~~~l~~~~L~~~-~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
+|+++|+++|+..||..|||+||+.|..+- ..++++.+++.+..-|+.+||... .+..+++|||||++|++||||++.
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAial 162 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIAL 162 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhc
Confidence 899999999999999999999999997654 468899999999999999999987 899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|+++++||||+||||.+...+-++|+++++ |.|++++|||++++..+|||++++.+|+++..|+++++.+
T Consensus 163 dPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred CCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999974 8999999999999999999999999999999999999865
No 57
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-48 Score=423.89 Aligned_cols=224 Identities=30% Similarity=0.479 Sum_probs=208.6
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---- 1537 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~---- 1537 (1833)
+++|++++|+|+|+ ++.+++||||+|++||++||+||+|+|||||+|.|.|+++|++|+|.++|+++..-
T Consensus 6 ~~~I~vr~v~~~fG------~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFG------DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecC------CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 46899999999995 46799999999999999999999999999999999999999999999999998652
Q ss_pred hHHhccceEEEecCCCCCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCccc-cCCCCCCCChhHHHHHHHHHH
Q 000224 1538 PKAARRLIGYCPQFDALLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1538 ~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~L~~~-~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
..++|+++|+++|+-+||..+||+||+.|..+- ..++++.+++.+...|+.+||... +++.+++|||||++|++||||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARA 159 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARA 159 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHH
Confidence 235789999999999999999999999997654 468888888999999999999876 999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++.||++|++||||+||||.+...+-++|++++++-| .|++++|||++++..+|||++++.+|+++..|+++++.+
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999986654 799999999999999999999999999999999999875
No 58
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.4e-47 Score=453.98 Aligned_cols=290 Identities=32% Similarity=0.522 Sum_probs=233.4
Q ss_pred ccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEEEccCCCCCCCCCHHH
Q 000224 576 CCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVRE 655 (1833)
Q Consensus 576 ~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e 655 (1833)
+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......|+.+|||||++.+++.+||+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 46999999999999999999999999999999999999999999999999986555566788999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHH
Q 000224 656 HLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQ 735 (1833)
Q Consensus 656 ~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~ 735 (1833)
|+.+++..++.+..+.+++++++++.+||.+..++++++|||||||||+||+||+++|++|||||||+||||.+++.+|+
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 165 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWD 165 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHH
Confidence 99998888887777777889999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecCCC-hhhHHHHH----HHh
Q 000224 736 LIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPD-ASAAADIV----YRH 809 (1833)
Q Consensus 736 ~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~~~-~~~~~~~~----~~~ 809 (1833)
+|++++ +|+|||++||++++++.+||||++|++|++++.|++.+++++++..+ +.+...... ........ ..+
T Consensus 166 ~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T TIGR01188 166 YIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRRLGKDT-LESRPRDIQSLKVEVSMLIAELGET 244 (302)
T ss_pred HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHhcCCce-EEEEecCchhhhhhhhHHHhhhhhc
Confidence 999986 58999999999999999999999999999999999999988876543 222221111 11000111 111
Q ss_pred CCCceEEeeeCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCChHHHHHHHh
Q 000224 810 IPSALCVSEVGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVA 884 (1833)
Q Consensus 810 ~p~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tlE~vfl~~~ 884 (1833)
.+........++.+.+.++.. .....++++.+.. ....+.++.+..++|||+|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-----------------~~~~i~~~~~~~~~Le~~f~~~~ 301 (302)
T TIGR01188 245 GLGLLAVTVDSDRIKILVPDG-DETVPEIVEAAIR-----------------NGIRIRSISTERPSLDDVFLKLT 301 (302)
T ss_pred cccceeeeecCCeEEEEEcCc-hhHHHHHHHHHHH-----------------CCCceEEEEcCCCCHHHHHHHHh
Confidence 222211222233444444422 1123444444432 24678899999999999999874
No 59
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-47 Score=453.17 Aligned_cols=223 Identities=33% Similarity=0.533 Sum_probs=206.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
.++++|++|+|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 2 ~l~~~~l~~~~~------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~ 75 (301)
T TIGR03522 2 SIRVSSLTKLYG------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQR 75 (301)
T ss_pred EEEEEEEEEEEC------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHh
Confidence 478999999995 35699999999999999999999999999999999999999999999999998766566788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
++||+||++.+++.+|+.||+.+.+..+|.+.++..++++++++.+||.+..++++++|||||||||+||+||+++|++|
T Consensus 76 ~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 155 (301)
T TIGR03522 76 NIGYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVL 155 (301)
T ss_pred ceEEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999999999888888766666677889999999999899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
||||||+||||.+++.+|+.|++++ + + +|||++||++++++.+||||++|++|++++.|++++++.+.+
T Consensus 156 iLDEPt~gLD~~~~~~l~~~l~~~~-~-~-~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (301)
T TIGR03522 156 ILDEPTTGLDPNQLVEIRNVIKNIG-K-D-KTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAANK 224 (301)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHhc-C-C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHhcC
Confidence 9999999999999999999999984 3 4 689999999999999999999999999999999999987644
No 60
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.5e-46 Score=450.25 Aligned_cols=297 Identities=29% Similarity=0.474 Sum_probs=240.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|++|+|+ ++.+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++......+++++|
T Consensus 3 l~~~~l~~~~~----~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG----TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC----CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 78999999995 34699999999999999999999999999999999999999999999999998765566788999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+||.||+.+++.++|.+.++.+++++++++.+||.+..++++++||||||||++||+||+++|++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLD 158 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILD 158 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999999888888776767788999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEEEecCCCh
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTLVKSAPDA 799 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~~~~~~~~ 799 (1833)
|||+||||.+++++|++|+++++++|||++||++++++.+||||++|++|++++.|++.++++.++ +..+.+.......
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~-~~~~~i~~~~~~~ 237 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAANK-KQVIEVEFEEQID 237 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHhcC-CceEEEEecCcch
Confidence 999999999999999999999878999999999999999999999999999999999999987744 3334433222111
Q ss_pred hhHHHHHHHhCCCceEEee-eCcEEEEEecCCCcchHHHHHHHHHHhhhhccccccccccccccCCCeeEEEecCCChHH
Q 000224 800 SAAADIVYRHIPSALCVSE-VGTEITFKLPLASSSSFESMFREIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEE 878 (1833)
Q Consensus 800 ~~~~~~~~~~~p~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~tlE~ 878 (1833)
. ... +..+....... .++...+..+.. .....++.+.+.. ....+.++....++|||
T Consensus 238 ~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~sLe~ 295 (301)
T TIGR03522 238 L---QLF-ETLEEISSVKNTGGNTWKLTFETP-NDTRPEIFKLAQQ-----------------KGLKLISLQQNEKNLEQ 295 (301)
T ss_pred h---HHH-hhccccceeeecCCCeEEEEEcCc-cchHHHHHHHHHH-----------------CCCceEEEEeCCCCHHH
Confidence 1 111 11111111111 223333332221 1122333333321 24567889999999999
Q ss_pred HHHHH
Q 000224 879 VFLRV 883 (1833)
Q Consensus 879 vfl~~ 883 (1833)
+|.++
T Consensus 296 ~~~~~ 300 (301)
T TIGR03522 296 VFREI 300 (301)
T ss_pred HHHHh
Confidence 99875
No 61
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1e-46 Score=452.17 Aligned_cols=213 Identities=42% Similarity=0.715 Sum_probs=197.3
Q ss_pred ccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHH
Q 000224 1482 AKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQ 1561 (1833)
Q Consensus 1482 ~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~ 1561 (1833)
++.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++...+...++++||+||++.+++.+|++
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 35699999999999999999999999999999999999999999999999998765556778899999999999999999
Q ss_pred HHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHH
Q 000224 1562 EHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMW 1641 (1833)
Q Consensus 1562 e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~ 1641 (1833)
||+.+.+..++.+..+.++++.++++.++|.+..++++++|||||||||+||+||+++|++|||||||+||||.+++.++
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 164 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIW 164 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHH
Confidence 99999888887766666677889999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCC
Q 000224 1642 EVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGN 1696 (1833)
Q Consensus 1642 ~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~ 1696 (1833)
+.|+++++ +| +|||++||++++++.+||||++|++|++++.|++++++++++.
T Consensus 165 ~~l~~~~~-~g-~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~~~~ 217 (302)
T TIGR01188 165 DYIRALKE-EG-VTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRRLGK 217 (302)
T ss_pred HHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHhcCC
Confidence 99999964 44 6899999999999999999999999999999999999887654
No 62
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.4e-46 Score=449.20 Aligned_cols=225 Identities=39% Similarity=0.632 Sum_probs=204.9
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
.+|+++||+|.|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 47999999999953 469999999999999999999999999999999999999999999999999865555567
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
+++||+||++.+++.+|++||+.+++..++.+..+.++++.++++.++|.+..++++++|||||||||+||+||+++|++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 156 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQL 156 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 88999999999999999999999877666665555556778899999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
|||||||+||||.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++++.|+++++.+...
T Consensus 157 llLDEPt~gLD~~~~~~l~~~l~~~~~-~g-~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 227 (303)
T TIGR01288 157 LILDEPTTGLDPHARHLIWERLRSLLA-RG-KTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDEQI 227 (303)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHh-CC-CEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhcC
Confidence 999999999999999999999999864 44 689999999999999999999999999999999999987643
No 63
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-47 Score=422.69 Aligned_cols=203 Identities=29% Similarity=0.472 Sum_probs=191.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.+++++++|.|+. ..||+|+||+|.+||+++|+||+|||||||+|+|+|+.+|++|+|.++|..+. .....+
T Consensus 3 ~l~i~~v~~~f~~----~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~----~p~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG----VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVT----GPGPDI 74 (248)
T ss_pred eEEEEeeEEEeCc----eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccC----CCCCCE
Confidence 5899999999953 67999999999999999999999999999999999999999999999998873 234579
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|||||++.|+|.+||+||+.++....|.++++.++++.++|+.+||.+..++++++|||||||||+|||||+.+|++|+|
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLl 154 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLL 154 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999988888888999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCC
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANG 769 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G 769 (1833)
|||+++||+.+|..+.+.|.++. .++||+++|||.+||-.++|||++|.++
T Consensus 155 DEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 155 DEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999998873 4899999999999999999999999984
No 64
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.4e-45 Score=442.55 Aligned_cols=231 Identities=38% Similarity=0.618 Sum_probs=209.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||+|.|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......|+.
T Consensus 3 ~~i~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 78 (303)
T TIGR01288 3 VAIDLVGVSKSYG----DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVA 78 (303)
T ss_pred cEEEEEeEEEEeC----CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhc
Confidence 3699999999995 346999999999999999999999999999999999999999999999999886544556788
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+||+||++.+++.+||+||+.+++...+.+..+.+++++++++.++|.+..++++++||||||||++||+||+.+|++||
T Consensus 79 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 79 IGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred EEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987766666666667788899999999998999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcEEEEE
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGYTLTL 792 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy~l~~ 792 (1833)
|||||+|||+.+++.++++|++++ +|+|||++||++++++.+||||++|++|++++.|++.++++.+...+...+
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 234 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDEQIGCNVIEI 234 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhcCCCeEEEE
Confidence 999999999999999999999985 589999999999999999999999999999999999999877655444433
No 65
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-47 Score=445.01 Aligned_cols=223 Identities=30% Similarity=0.493 Sum_probs=210.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.|+++||+|.|++ ..||+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.|+|.+++.- .-.+|+|
T Consensus 3 ~i~l~~v~K~yg~----~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l-~P~~R~i 77 (338)
T COG3839 3 ELELKNVRKSFGS----FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDL-PPEKRGI 77 (338)
T ss_pred EEEEeeeEEEcCC----ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCC-ChhHCCE
Confidence 5899999999953 2299999999999999999999999999999999999999999999999999752 2335789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|+|||+..|||.|||+||+.|+.++++.+++++++++.++.+.++|++.+++++.+|||||||||+|||||+.+|++++|
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCC
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGV 786 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~ 786 (1833)
|||.|+||+..|..+...|+++.+ |.|+|.+|||-.||..++|||++|++|++...|+|.++.++...
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 999999999999999999999854 89999999999999999999999999999999999999776543
No 66
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=9.8e-48 Score=404.76 Aligned_cols=223 Identities=33% Similarity=0.552 Sum_probs=204.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~--~~ 1540 (1833)
..|.++||.|+|+ ++.+|+||||+|++||++||+|||||||||+|.|++|+.+|++|+|.++|.|++..+ .+
T Consensus 3 ~~L~a~~l~K~y~------kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~R 76 (243)
T COG1137 3 STLVAENLAKSYK------KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKR 76 (243)
T ss_pred cEEEehhhhHhhC------CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHH
Confidence 3689999999996 467999999999999999999999999999999999999999999999999998754 45
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh--hHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY--RMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~--~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
+|..|||+||++.+|..+||+||+.....++..+.+ +.+.+++++|++|++.+.++++..+||||||||+.|||||+.
T Consensus 77 ArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 77 ARLGIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred hhcCcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhc
Confidence 677899999999999999999999988877664444 334457799999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|+.++||||++|+||.+...+.++|+.++ ++| ..|++|-|+..|...+|||.+||.+|++.+.|+|+++.+.
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~-~rg-iGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLK-DRG-IGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHH-hCC-ceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999996 444 6899999999999999999999999999999999998753
No 67
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=441.72 Aligned_cols=227 Identities=32% Similarity=0.500 Sum_probs=212.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
..|+++||+|.|++ ..+|+++||+|++||+++|+||||||||||||||+|+++|++|+|+++|.+++.-+. .+
T Consensus 2 ~~i~l~~v~K~yg~------~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P-~~ 74 (338)
T COG3839 2 AELELKNVRKSFGS------FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPP-EK 74 (338)
T ss_pred cEEEEeeeEEEcCC------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-hH
Confidence 36899999999963 229999999999999999999999999999999999999999999999999987332 34
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
|.||+|+|+.+|||.|||+||+.|..+.++.+++++++++++..+.++|++..++++.+|||||||||++||||+++|++
T Consensus 75 R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v 154 (338)
T COG3839 75 RGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKV 154 (338)
T ss_pred CCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCE
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCe
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNF 1697 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~~ 1697 (1833)
++||||.|.||+..|..+...|+++.++-| .|+|++|||..|+..++|||++|++|++...|+|.++.++..+.
T Consensus 155 ~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~-~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~ 228 (338)
T COG3839 155 FLLDEPLSNLDAKLRVLMRSEIKKLHERLG-TTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANL 228 (338)
T ss_pred EEecCchhHhhHHHHHHHHHHHHHHHHhcC-CcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccch
Confidence 999999999999999999999999976554 78999999999999999999999999999999999998765443
No 68
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-47 Score=447.96 Aligned_cols=220 Identities=29% Similarity=0.503 Sum_probs=206.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++||+|.|+ +..||+|+||+|++||+++|||||||||||||+||+|+..|++|+|.++|+++.. ....+|.
T Consensus 4 ~~l~i~~v~k~yg----~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~-lpp~kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG----DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITD-VPPEKRP 78 (352)
T ss_pred ceEEEEeeeeecC----CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCC-CChhhcc
Confidence 4799999999994 5679999999999999999999999999999999999999999999999999975 3345678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
||+|||+-.|||+|||+||++|+.+.++ .++++++++++++|+.++|++..++++++|||||||||+|||||+.+|++|
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchh
Confidence 9999999999999999999999998655 455779999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+||||.|+||..-|.++...|+++. .|.|.|++|||-+||..++|||+||++|+|...|+|.++-.
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 9999999999999999999999984 49999999999999999999999999999999999988854
No 69
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.5e-47 Score=401.66 Aligned_cols=220 Identities=30% Similarity=0.496 Sum_probs=203.7
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH-HHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r~ 636 (1833)
.+.++||.|+|+ ++.+++|+||++++|||+||+|||||||||++.|++|+.+|++|+|.++|.|++. ++ .+.|.
T Consensus 4 ~L~a~~l~K~y~----kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 4 TLVAENLAKSYK----KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred EEEehhhhHhhC----CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 588999999994 4579999999999999999999999999999999999999999999999999975 33 45678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEE--LLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~--~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
.|||+||++..|-.|||+||+....+.+..+.+ +.+.+++++|+++++.+.++++..+||||||||+.|||||+.+|+
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 899999999999999999999988877764443 455568899999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+++||||++|+||.+...+.++++.++ .|..|++|.|+..|...+|||.+||++|++.+.|+|+++-+
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 999999999999999999999999997 48999999999999999999999999999999999988754
No 70
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-46 Score=415.30 Aligned_cols=206 Identities=29% Similarity=0.479 Sum_probs=193.1
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
..+++++++|.|++ ..||+|+||+|++||+++|+||+|||||||+|+|+|+.+|++|+|.++|..+.. ..
T Consensus 2 ~~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~----p~ 71 (248)
T COG1116 2 ALLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTG----PG 71 (248)
T ss_pred ceEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCC----CC
Confidence 36899999999963 679999999999999999999999999999999999999999999999998842 34
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
..+|||+|++.|+|.+||+||+.+.....|.++++.++++.++|+.+||.++.++++++|||||||||+|||||+.+|+|
T Consensus 72 ~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~l 151 (248)
T COG1116 72 PDIGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKL 151 (248)
T ss_pred CCEEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCE
Confidence 56999999999999999999999999988888877788999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECC
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGG 1679 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G 1679 (1833)
|+||||+++||+.+|..+++.|.++.++.+ .||+++|||.+||-.++|||++|.++
T Consensus 152 LLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 152 LLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred EEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999987665 69999999999999999999999984
No 71
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-46 Score=443.55 Aligned_cols=223 Identities=30% Similarity=0.511 Sum_probs=208.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
..++++|++|.|+ +..||+|+||+|++||+++||||+|||||||||||+|+..|++|+|.++|+++..-+. .+
T Consensus 4 ~~l~i~~v~k~yg------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp-~k 76 (352)
T COG3842 4 PALEIRNVSKSFG------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPP-EK 76 (352)
T ss_pred ceEEEEeeeeecC------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-hh
Confidence 5799999999996 4679999999999999999999999999999999999999999999999999987443 46
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
|.||+|+|+.+|||.|||+||+.|..+.++ .+++++++++.++++.++|.+++++++.+|||||||||+|||||+.+|+
T Consensus 77 R~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~ 156 (352)
T COG3842 77 RPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPK 156 (352)
T ss_pred cccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcc
Confidence 779999999999999999999999998655 4446688999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+||||||.++||..-|.++..-|+++.++.| .|.|++|||-+|+..++|||++|++|+|.-.|+|+++..+
T Consensus 157 vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~g-iT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 157 VLLLDEPLSALDAKLREQMRKELKELQRELG-ITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred hhhhcCcccchhHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 9999999999999999999999999987665 7999999999999999999999999999999999998764
No 72
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.7e-42 Score=478.95 Aligned_cols=446 Identities=19% Similarity=0.223 Sum_probs=286.1
Q ss_pred HcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccc-cChhhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHH
Q 000224 319 MMGL-KDGIFHLSWFITYAAQFAVSSGIITACTM--DSLFKY-SDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAV 394 (1833)
Q Consensus 319 ~mGl-~~~~~wlsw~i~~~~~~~i~~~i~~~~~~--~~~f~~-s~~~~~f~~~~l~~~s~i~~~f~iS~fF~~~~~a~~~ 394 (1833)
..|+ +.++|.+|-.+..++..++.+++..++.+ ..+-.. ..+++.+++.++..++..++..++|+++.+...|..+
T Consensus 487 ~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~ 566 (1394)
T TIGR00956 487 KYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTP 566 (1394)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3444 67788888888877766555544443322 111111 2233334444555666777888999999999999887
Q ss_pred HHHHHHHHHh-hhhcccCCCchhHHhHHHhhhchhHHHHHHHHHHHHhhccC--------Ccccccc------cc-----
Q 000224 395 GTLSFLGAFF-PYYTVNDEAVPMVLKVIASLLSPTAFALGSVNFADYERAHV--------GLRWSNM------WR----- 454 (1833)
Q Consensus 395 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~sl~~~~a~~~~~~~~~~~e~~~~--------g~~~~~~------~~----- 454 (1833)
+.++++...+ --+++....++...+|+ ..++|+.+++.......|..... |-.+++. ..
T Consensus 567 ~~~~~~~~~lf~Gf~i~~~~mp~~~~W~-~yisp~~yafeal~~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~ 645 (1394)
T TIGR00956 567 AAILLLALSIYTGFAIPRPSMLGWSKWI-YYVNPLAYAFESLMVNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAE 645 (1394)
T ss_pred HHHHHHHHHHHcccccChhhccHHHHHH-HHcCHHHHHHHHHHHhhhcCCcccccccccCCCCCCCCCccCccccCCCCc
Confidence 7765443222 22345555677767776 46788888876655554432211 0011111 00
Q ss_pred ----CCC---------C---chHHHHHHHHHHHHHHHHHHHHHH-hccccCCCCccccccccccccccCccccccccccc
Q 000224 455 ----ASS---------G---VNFLVCLLMMLLDTLLYGVIGLYL-DKVLPKENGVRYRWNFIFQNCFRRKKSVIKHHVSS 517 (1833)
Q Consensus 455 ----~~~---------~---~~~~~~~~~l~~~~~ly~~l~~yl-d~v~p~~~G~~~p~~f~~~~~~w~~~~~~~~~~~~ 517 (1833)
..+ + ...+.-+++++.-+++|.++++.. +.+.|...+-... -|.-...-|..+...+
T Consensus 646 ~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 719 (1394)
T TIGR00956 646 PGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKGAKQKGEIL-VFRRGSLKRAKKAGET----- 719 (1394)
T ss_pred CCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccccCCCCceE-eeccccccchhhcccc-----
Confidence 000 0 112333334444444444443322 2222222110000 0000000010000000
Q ss_pred hhHHhhhhhhhhhhhhhccccCcchhhhhhhhccc-cccCcceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEec
Q 000224 518 AEVKINKKLSKEKECAFALDACEPVVEAISLDMKQ-QEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLG 596 (1833)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG 596 (1833)
.+.+. ...++..........+..+....+... ....+..++++||++.|+.+++.+.+|+|+|+++++||++||+|
T Consensus 720 ~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G 796 (1394)
T TIGR00956 720 SASNK---NDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMG 796 (1394)
T ss_pred ccccc---ccccccccCCCCccccccccccccccccccCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEEC
Confidence 00000 000000000000000000000000000 00112358999999999754445679999999999999999999
Q ss_pred CCCCChHHHHHHHcCCCC---CCcceEEEcCccCCccHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcC---CCHHH
Q 000224 597 HNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG---VKEEL 670 (1833)
Q Consensus 597 ~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~---~~~~~ 670 (1833)
|||||||||+++|+|+.+ |++|+|.++|+++.. ..|+.+|||+|++.+++.+||+||+.+.+.++. .+.++
T Consensus 797 ~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~---~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~ 873 (1394)
T TIGR00956 797 ASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS---SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSE 873 (1394)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh---hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHH
Confidence 999999999999999998 789999999998742 467889999999999999999999999887753 44556
Q ss_pred HHHHHHHHHHHcCCCcccccccC----CCChhHHHHHHHHHHHhCCCc-EEEEeCCCCCCCHHHHHHHHHHHHHHh-CCc
Q 000224 671 LESVVAEMVDEVGLADKVNIVVR----ALSGGMKRKLSLGIALIGDSK-VVILDEPTSGMDPYSMRLTWQLIKKIK-KGR 744 (1833)
Q Consensus 671 ~~~~v~~~l~~~~L~~~~~~~~~----~LSgGqkqrl~lA~al~~~p~-vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~ 744 (1833)
.+++++++++.+||.+.+|+.++ .|||||||||+||+||+.+|+ ||+|||||+|||+.+++.++++|++++ +|+
T Consensus 874 ~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~ 953 (1394)
T TIGR00956 874 KMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQ 953 (1394)
T ss_pred HHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 67789999999999998999887 799999999999999999997 999999999999999999999999985 689
Q ss_pred EEEEEcCCHHH-HHhhcCEEEEeeCC-EEEeecCH
Q 000224 745 IILLTTHSMDE-AEELGDRIAIMANG-SLKCCGSS 777 (1833)
Q Consensus 745 tiil~tH~~~e-~~~l~Dri~im~~G-~l~~~G~~ 777 (1833)
|||+|||+++. +...+||+++|++| +++..|++
T Consensus 954 tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 954 AILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred EEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 99999999986 45679999999997 99999986
No 73
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.9e-41 Score=466.10 Aligned_cols=438 Identities=18% Similarity=0.220 Sum_probs=278.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccc-cChhhhHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 000224 323 KDGIFHLSWFITYAAQFAVSSGIITACTM--DSLFKY-SDKTVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSF 399 (1833)
Q Consensus 323 ~~~~~wlsw~i~~~~~~~i~~~i~~~~~~--~~~f~~-s~~~~~f~~~~l~~~s~i~~~f~iS~fF~~~~~a~~~~~l~~ 399 (1833)
+.++|.++-++.-++..++.+++..++.+ ..+=+. ..++..++++++-.++..++..++++++++...|..++.++.
T Consensus 609 ~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~ 688 (1470)
T PLN03140 609 PPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVL 688 (1470)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 67899999888877766665544433221 111111 223333444445556677778889999999998888877655
Q ss_pred HHHHh-hhhcccCCCchhHHhHHHhhhchhHHHHHHHHHHHHhhccCCccccccccC------------CCCc-----hH
Q 000224 400 LGAFF-PYYTVNDEAVPMVLKVIASLLSPTAFALGSVNFADYERAHVGLRWSNMWRA------------SSGV-----NF 461 (1833)
Q Consensus 400 ~~~~~-~~~~~~~~~~~~~~~~~~sl~~~~a~~~~~~~~~~~e~~~~g~~~~~~~~~------------~~~~-----~~ 461 (1833)
+..++ --|++....++...+|+ ..++|..+++.......|. |.+|.+.... ..++ ..
T Consensus 689 l~~~lf~Gf~i~~~~ip~w~~W~-~yisp~~Ya~eal~~NEf~----~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~ 763 (1470)
T PLN03140 689 LLVFLLGGFILPKGEIPNWWEWA-YWVSPLSYGFNALAVNEMF----APRWMNKMASDNSTRLGTAVLNIFDVFTDKNWY 763 (1470)
T ss_pred HHHHHHccceechHhCchHHHHH-HHhCHHHHHHHHHHHHhcc----CccccCcccCCCCcccHHHHHHhcCcCccccch
Confidence 43332 22445556677777775 4678888887665555442 2223221000 0011 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-cccCCCCccccccccccccccCcc-ccccccccchhH--Hhhhhhh--hhhh---h
Q 000224 462 LVCLLMMLLDTLLYGVIGLYLDK-VLPKENGVRYRWNFIFQNCFRRKK-SVIKHHVSSAEV--KINKKLS--KEKE---C 532 (1833)
Q Consensus 462 ~~~~~~l~~~~~ly~~l~~yld~-v~p~~~G~~~p~~f~~~~~~w~~~-~~~~~~~~~~~~--~~~~~~~--~~~~---~ 532 (1833)
+..+++|+.-+++|.+++.+.=. +-|..-+.... .+.+ +..+........ ..++... ..+. .
T Consensus 764 w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1470)
T PLN03140 764 WIGVGALLGFTILFNVLFTLALTYLNPLGKKQAII---------SEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMS 834 (1470)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccc---------cccchhhhhccccccccccccccccccccccccccc
Confidence 22233333333444443322221 11111110000 0000 000000000000 0000000 0000 0
Q ss_pred hhcc---ccCcchhhhhhhhcccc----ccCcceEEEEeeEEEecCCC---------CcccceeeeeEEEeCCeEEEEec
Q 000224 533 AFAL---DACEPVVEAISLDMKQQ----EVDGRCIQIRKLHKVYATKR---------GNCCAVNSLQLTLYENQILALLG 596 (1833)
Q Consensus 533 ~~~~---~~~~~~~e~~~~~~~~~----~~~~~~i~i~~l~k~y~~~~---------~~~~al~~vsl~i~~Gei~~llG 596 (1833)
.... +..+...+..... ... ......+..+||++..+.+. +++.+|+|+|+++++||+++|+|
T Consensus 835 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G 913 (1470)
T PLN03140 835 NPEGLSKNRDSSLEAANGVA-PKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMG 913 (1470)
T ss_pred cccccccccccccccccccc-cccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEEC
Confidence 0000 0000000000000 000 01123589999998875321 23579999999999999999999
Q ss_pred CCCCChHHHHHHHcCCCCC--CcceEEEcCccCCccHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhc---CCCHHHH
Q 000224 597 HNGAGKSTTISMLVGLIPP--TTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK---GVKEELL 671 (1833)
Q Consensus 597 ~NGaGKSTll~~l~Gl~~p--~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~---~~~~~~~ 671 (1833)
||||||||||++|+|..++ .+|+|.++|++... ...++.+|||+|++.+++.+||+|||.+.+.++ ..+.++.
T Consensus 914 ~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~ 991 (1470)
T PLN03140 914 VSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEK 991 (1470)
T ss_pred CCCCCHHHHHHHHcCCCCCCcccceEEECCccCCh--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHH
Confidence 9999999999999999874 78999999987642 235677999999999999999999999987654 2344556
Q ss_pred HHHHHHHHHHcCCCccccccc-----CCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcE
Q 000224 672 ESVVAEMVDEVGLADKVNIVV-----RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRI 745 (1833)
Q Consensus 672 ~~~v~~~l~~~~L~~~~~~~~-----~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~t 745 (1833)
+++++++++.+||.+..|+.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..++++|++++ +|+|
T Consensus 992 ~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~t 1071 (1470)
T PLN03140 992 MMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1071 (1470)
T ss_pred HHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCE
Confidence 678999999999998888886 5899999999999999999999999999999999999999999999986 5899
Q ss_pred EEEEcCCHH-HHHhhcCEEEEeeC-CEEEeecCH
Q 000224 746 ILLTTHSMD-EAEELGDRIAIMAN-GSLKCCGSS 777 (1833)
Q Consensus 746 iil~tH~~~-e~~~l~Dri~im~~-G~l~~~G~~ 777 (1833)
||+|||+++ ++..++||+++|++ |++++.|++
T Consensus 1072 VI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~ 1105 (1470)
T PLN03140 1072 VVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPL 1105 (1470)
T ss_pred EEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCc
Confidence 999999998 57789999999996 899999985
No 74
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.2e-45 Score=443.24 Aligned_cols=222 Identities=31% Similarity=0.459 Sum_probs=205.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
|+++||+|.|+++++.+.+|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++.. . ....|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999643223579999999999999999999999999999999999999999999999999853 1 23467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
++|||+||++.+++.+||+||+.+.....+.++++.++++.++++.+||.+..++++++|||||||||+|||||+.+|++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~i 161 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKV 161 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCE
Confidence 89999999999999999999999988777777778888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||||++|||.+++.++++|+++++ |.|||++||+|+++..+||||++|++|++++.|++.++.
T Consensus 162 LLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 162 LLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999853 899999999999999999999999999999999987764
No 75
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.1e-46 Score=420.61 Aligned_cols=221 Identities=30% Similarity=0.470 Sum_probs=199.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+++++||++.|+ ++.+++|+||+|++||+++|+||||||||||+|+|+|+++|.+|+|+++|+++.+ ..+++.
T Consensus 2 ~L~~~~ls~~y~------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYG------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEEC------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 589999999996 4679999999999999999999999999999999999999999999999999976 567788
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
+++||+||.+.....+||+|-+.++.. ..+...++.++.+++.|+.+|+.+.++|.+.+||||||||+.|||||+.
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ 155 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQ 155 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhc
Confidence 899999999877778999998876432 1122233445578899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+|++|+|||||++||+..+.+++++++++++++| .|||+++||++.+.++|||+++|++|++++.|+|+++.
T Consensus 156 ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 156 ETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred CCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 9999999999999999999999999999986655 68999999999999999999999999999999987654
No 76
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-46 Score=417.59 Aligned_cols=225 Identities=26% Similarity=0.444 Sum_probs=205.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCc---cCCccHHHhh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGK---NITADMDEIR 635 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~---~i~~~~~~~r 635 (1833)
.|++++++|.|++ ..|++|+|++|+.||.+||+|||||||||||++|+|+..|++|+|.++|. |.+. .....
T Consensus 2 ~i~i~~~~~~~~~----~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~-~~~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA----FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSN-LAVRD 76 (345)
T ss_pred ceeehhhhhhccc----ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhc-cchhh
Confidence 4789999999954 56999999999999999999999999999999999999999999999999 5543 23344
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKG--VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~--~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
++||+|+||..||+.|||.+||+|+.+.+. .++.+++.++.++|+.++|+...++++.+||||||||++|||||+.+|
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP 156 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEP 156 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCC
Confidence 789999999999999999999999987663 345678999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCcE
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVGY 788 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~gy 788 (1833)
++|+||||+++||+.-|+.+...|+++.+ |.|+|++|||.+|+.++||||++|++|+|...|++.+.-...+.-+
T Consensus 157 ~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~f 233 (345)
T COG1118 157 KVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASRF 233 (345)
T ss_pred CeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCccc
Confidence 99999999999999999999999999853 8999999999999999999999999999999999998876655443
No 77
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.2e-45 Score=441.75 Aligned_cols=226 Identities=27% Similarity=0.466 Sum_probs=205.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
||+++||+|+|+++. +.+.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... . .
T Consensus 1 mI~~~~lsk~y~~~~--~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~ 78 (343)
T TIGR02314 1 MIKLSNITKVFHQGT--KTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELT 78 (343)
T ss_pred CEEEEEEEEEECCCC--cceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 488999999996321 134699999999999999999999999999999999999999999999999998652 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..|++|||+||+..+++.+||+||+.+.....+.++.+.++++.++++.+||.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~ 158 (343)
T TIGR02314 79 KARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASN 158 (343)
T ss_pred HHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhC
Confidence 35778999999999999999999999877777777767778889999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+||||.+++.++++|++++++.| .|||++||+|+++.++||||++|++|++++.|+++++..
T Consensus 159 P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 159 PKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 999999999999999999999999999975445 689999999999999999999999999999999988864
No 78
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=418.47 Aligned_cols=222 Identities=29% Similarity=0.472 Sum_probs=208.6
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC--ccHHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT--ADMDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~--~~~~~~r~ 636 (1833)
.++++++++.|+++ ..+++|+|+++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+...+|+
T Consensus 3 ~i~~~~l~~~y~~~---~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~ 79 (235)
T COG1122 3 MIEAENLSFRYPGR---KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQ 79 (235)
T ss_pred eEEEEEEEEEcCCC---ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhc
Confidence 58899999999754 57999999999999999999999999999999999999999999999999886 56778999
Q ss_pred ceEEEccCC-CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYD-ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~-~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
++|+|+|+| ..+..-||.|.++|+....|++.+++++++.++++.+|+.+.+++++.+|||||||||+||.+|+.+|++
T Consensus 80 ~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 80 KVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred ceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCE
Confidence 999999998 3455669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
||||||||||||.+++++.++++++++ |+|||++|||++++..+|||+++|++|+++.+|+|.++.+.
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999963 68999999999999999999999999999999998776543
No 79
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=399.70 Aligned_cols=224 Identities=27% Similarity=0.449 Sum_probs=205.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----h
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----P 1538 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~----~ 1538 (1833)
.+|+++||+|.|++ ++.+|+||||+|++||+++|+||+|||||||+|+|.|+..|++|+|.++|.++... .
T Consensus 2 ~~i~~~nl~k~yp~-----~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPG-----GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCC-----CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 47999999999974 46799999999999999999999999999999999999999999999999988652 3
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHH--------HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHH
Q 000224 1539 KAARRLIGYCPQFDALLEYLTVQEHLELYA--------RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~--------~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl 1610 (1833)
++.|++|||++|.+.|.+.+||.+|+..+. .+-|+..++.+..+.+.|+++|+.+++.+++++|||||||||
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRV 156 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRV 156 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHH
Confidence 457889999999999999999999987642 234666666677888999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|+++|-|||+++|||.+.+.+++.|++++++.| .|||++.|+++.+.++||||+-|++|+++.+|+++++
T Consensus 157 aIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g-~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el 235 (258)
T COG3638 157 AIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDG-ITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASEL 235 (258)
T ss_pred HHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhh
Confidence 999999999999999999999999999999999999987776 6899999999999999999999999999999999886
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
.+
T Consensus 236 ~~ 237 (258)
T COG3638 236 TD 237 (258)
T ss_pred hH
Confidence 54
No 80
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-46 Score=415.10 Aligned_cols=231 Identities=31% Similarity=0.478 Sum_probs=212.3
Q ss_pred ceEEEEeeEEEecCCC--------------------CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCc
Q 000224 558 RCIQIRKLHKVYATKR--------------------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT 617 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~--------------------~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~ 617 (1833)
..|+++||+|.|+.+. +-+..++|+||+|++|||++|.|-+|||||||+++|.++++||+
T Consensus 3 ~~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~ 82 (386)
T COG4175 3 VKIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTR 82 (386)
T ss_pred ceEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCC
Confidence 3589999999997521 23467899999999999999999999999999999999999999
Q ss_pred ceEEEcCccCCc----cHHHh-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCccccccc
Q 000224 618 GDALVFGKNITA----DMDEI-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVV 692 (1833)
Q Consensus 618 G~i~i~g~~i~~----~~~~~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~ 692 (1833)
|+|.++|.|+.. ...+. |+++++|||+..|+|..||.||..|+.+++|+++++.++++.+.|+.+||....++++
T Consensus 83 G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 83 GEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP 162 (386)
T ss_pred ceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc
Confidence 999999999853 23343 4779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCE
Q 000224 693 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGS 770 (1833)
Q Consensus 693 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~ 770 (1833)
++|||||||||.|||||+.+|+||++|||+|+|||.-|.++.+.|.++.+ .+|||++|||+|||.+++|||++|++|+
T Consensus 163 ~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ 242 (386)
T COG4175 163 NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGE 242 (386)
T ss_pred ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCe
Confidence 99999999999999999999999999999999999999999999999853 8999999999999999999999999999
Q ss_pred EEeecCHHHHHhhhCCcE
Q 000224 771 LKCCGSSLFLKHQYGVGY 788 (1833)
Q Consensus 771 l~~~G~~~~Lk~~~g~gy 788 (1833)
++.+|+|+++-......|
T Consensus 243 ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 243 IVQVGTPEEILLNPANDY 260 (386)
T ss_pred EEEeCCHHHHHcCccHHH
Confidence 999999999876544433
No 81
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=412.86 Aligned_cols=226 Identities=26% Similarity=0.445 Sum_probs=204.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCe---eCCCChHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGK---DIRSDPKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~---~i~~~~~~ 1540 (1833)
+|++++++|.|+ ...|++|||++|+.||.+||+||||||||||+|+|+|++.|++|+|.++|+ |.+. ...
T Consensus 2 ~i~i~~~~~~~~------~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~-~~~ 74 (345)
T COG1118 2 SIRINNVKKRFG------AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSN-LAV 74 (345)
T ss_pred ceeehhhhhhcc------cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhc-cch
Confidence 478999999995 467999999999999999999999999999999999999999999999999 6544 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
..++||+++|+.+||+.|||.+|+.|..+.+.. ++.+++.++.++|+.+.|+..+++++.+||||||||+++||||+-
T Consensus 75 ~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~ 154 (345)
T COG1118 75 RDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAV 154 (345)
T ss_pred hhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhc
Confidence 346799999999999999999999998876532 345678889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcCCe
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNF 1697 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~~~ 1697 (1833)
+|++|+||||+++||..-|+++...|+++.++-| .|++++|||++|+.++||||++|++|+|...|+++++...-...
T Consensus 155 eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~ 232 (345)
T COG1118 155 EPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASR 232 (345)
T ss_pred CCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCcc
Confidence 9999999999999999999999999999976655 68999999999999999999999999999999999997765443
No 82
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.3e-45 Score=415.16 Aligned_cols=228 Identities=27% Similarity=0.434 Sum_probs=205.1
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||++.|+ ++.+++|+||++++||+++|+||||||||||+|+|+|+++|.+|+|.++|+++.. ...++.+.
T Consensus 2 ~L~~~~ls~~y~----~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYG----GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEEC----CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhh
Confidence 488999999995 4579999999999999999999999999999999999999999999999999964 66778889
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVL----KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~----~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
+||+||.+.....+||+|-+.++..- .+...++.++.++++|+.+|+.+..++.+.+||||||||+.|||||+++|
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~ 157 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQET 157 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCC
Confidence 99999999888889999999876432 12224445568999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH------HHHhhhC
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL------FLKHQYG 785 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~------~Lk~~~g 785 (1833)
++|+|||||++||...+-+++++++++. +|+|||+++||++.|.++||++++|++|++.+.|+|. .|++-||
T Consensus 158 ~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~e~l~~Vyg 237 (258)
T COG1120 158 PILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTEENLREVYG 237 (258)
T ss_pred CEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCHHHHHHHhC
Confidence 9999999999999999999999999996 4899999999999999999999999999999999975 4667777
Q ss_pred CcEEE
Q 000224 786 VGYTL 790 (1833)
Q Consensus 786 ~gy~l 790 (1833)
.....
T Consensus 238 v~~~~ 242 (258)
T COG1120 238 VDADV 242 (258)
T ss_pred CceEE
Confidence 66543
No 83
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=392.32 Aligned_cols=219 Identities=30% Similarity=0.467 Sum_probs=205.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCc-----ceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT-----GDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~-----G~i~i~g~~i~~--- 629 (1833)
..++++||++.|+ .+.||+|||++|++++++||+||+||||||+|+++..+....+ |+|.++|+|+..
T Consensus 6 ~~~~~~~l~~yYg----~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~ 81 (253)
T COG1117 6 PAIEVRDLNLYYG----DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV 81 (253)
T ss_pred ceeEecceeEEEC----chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC
Confidence 5799999999994 5679999999999999999999999999999999999988764 999999999964
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
+..++|++||+|+|.|.-|| +|++||+.++.++.|...+++++.+++.|+...|- +.+++.+..|||||||||||
T Consensus 82 d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcI 160 (253)
T COG1117 82 DVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCI 160 (253)
T ss_pred CHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHH
Confidence 57789999999999999999 89999999999999988888999999999999875 45678888999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||+-+|+|||||||||+|||.+...+.++|.++++.-|||++||+|..|.+++|+.+.+..|++++.|+...+-
T Consensus 161 ARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 161 ARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986653
No 84
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-45 Score=412.66 Aligned_cols=218 Identities=30% Similarity=0.453 Sum_probs=190.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
.+|+++|+++.|++ . +||+||||+|++||+++|+||||||||||+|+|+|+++|++|+|.+.|+++..... +
T Consensus 3 ~~i~v~nl~v~y~~-----~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~--~ 74 (254)
T COG1121 3 PMIEVENLTVSYGN-----R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK--R 74 (254)
T ss_pred cEEEEeeeEEEECC-----E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc--C
Confidence 47999999999963 2 59999999999999999999999999999999999999999999999998754322 4
Q ss_pred cceEEEecCC---CCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000224 1543 RLIGYCPQFD---ALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1543 ~~ig~~pQ~~---~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
.+||||||.. .-|| +||+|-+.+....+ +...++.++.++++|+++|+.+.+++++++|||||+||+.||||
T Consensus 75 ~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARA 153 (254)
T COG1121 75 LRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARA 153 (254)
T ss_pred CeEEEcCcccccCCCCC-cCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHH
Confidence 6799999953 3344 79999988753211 12233346889999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+.+|++|+|||||+|+|+.++..+.++|++++++ | +||+++|||++.+.++||||+.++ +++.|.|++++..+
T Consensus 154 L~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g-~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 154 LAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-G-KTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred hccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-C-CEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 99999999999999999999999999999999754 5 699999999999999999999995 68999999987643
No 85
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-45 Score=385.27 Aligned_cols=214 Identities=27% Similarity=0.442 Sum_probs=203.5
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHHh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI 634 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~ 634 (1833)
.|+++||+|.|+.. ..||+|+||+|++||++.|+||+||||||++|+|.|..+||+|+|.++|+|+.. +..-.
T Consensus 1 mI~f~~V~k~Y~~g---~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~L 77 (223)
T COG2884 1 MIRFENVSKAYPGG---REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFL 77 (223)
T ss_pred CeeehhhhhhcCCC---chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchh
Confidence 37899999999753 579999999999999999999999999999999999999999999999999853 45568
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
|++||+|+|+..|.++.||+||++|..+..|.+++++++++.++|+.+||.++.+..+.+||||||||++||||++.+|+
T Consensus 78 RR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 78 RRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred hheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
+||-||||.+|||....++++++.++. .|.|||++|||.+.++.+--|++.+++|+++...
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999996 5999999999999999999999999999998543
No 86
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=403.45 Aligned_cols=221 Identities=30% Similarity=0.484 Sum_probs=203.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 635 (1833)
..+++++|+|+| |...||+|+||++++||+++|+|||||||||++|+|+|.++|++|+|.++|++++. .....|
T Consensus 3 ~lL~v~~l~k~F----GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar 78 (250)
T COG0411 3 PLLEVRGLSKRF----GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIAR 78 (250)
T ss_pred ceeeeccceeec----CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHh
Confidence 357899999999 55789999999999999999999999999999999999999999999999999974 334567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC------------CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKG------------VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~------------~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl 703 (1833)
..|+--||...+|++|||.||+......+. ...++..+++.++|+.+||.+..++++++||+||||||
T Consensus 79 ~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 79 LGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred ccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHH
Confidence 889999999999999999999988654221 13467788999999999999999999999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
.|||||+.+|++|+||||.+||.|...+++.++|+++++ |.||++|.|||+.+..+||||+||+.|+++++|+|++..
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999999974 699999999999999999999999999999999998876
Q ss_pred h
Q 000224 782 H 782 (1833)
Q Consensus 782 ~ 782 (1833)
+
T Consensus 239 ~ 239 (250)
T COG0411 239 N 239 (250)
T ss_pred c
Confidence 5
No 87
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-45 Score=400.04 Aligned_cols=226 Identities=27% Similarity=0.469 Sum_probs=203.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC--ChHH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS--DPKA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~--~~~~ 1540 (1833)
.+|+++||++.|+++. ....||++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|.++.. ..+.
T Consensus 2 ~~l~v~nl~~~y~~~~--~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~ 79 (252)
T COG1124 2 TLLSVRNLSIVYGGGK--FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKA 79 (252)
T ss_pred ceEEEeceEEEecCCc--chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchh
Confidence 4799999999997543 12369999999999999999999999999999999999999999999999987643 2235
Q ss_pred hccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1541 ARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
.++.|.+|+||+ +|.|..||++.|.-.....|.++. ++++.++++.+||. ..+++++.+|||||+||++|||||+
T Consensus 80 ~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~--~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~ 157 (252)
T COG1124 80 FYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKS--QQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALI 157 (252)
T ss_pred hccceeEEecCCccccCcchhHHHHHhhhhccCCccHH--HHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhc
Confidence 678899999996 688999999999887777777654 34589999999996 5789999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
-+|++||||||||+||+..+.++|+++.+++++. +.|.|++|||+..++.+||||+||++|++++.++.+++++.
T Consensus 158 ~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~-~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 158 PEPKLLILDEPTSALDVSVQAQILNLLLELKKER-GLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred cCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhc-CceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999998665 47999999999999999999999999999999999998765
No 88
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-45 Score=396.64 Aligned_cols=221 Identities=29% Similarity=0.490 Sum_probs=204.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~ 633 (1833)
..|+++||+|.|++ ++.||+||||+|++||+++|+|++||||||||++|.|+.+|++|+|.++|.++.. ...+
T Consensus 2 ~~i~~~nl~k~yp~---~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~ 78 (258)
T COG3638 2 MMIEVKNLSKTYPG---GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRK 78 (258)
T ss_pred ceEEEeeeeeecCC---CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHH
Confidence 36999999999973 4579999999999999999999999999999999999999999999999998853 4677
Q ss_pred hhcceEEEccCCCCCCCCCHHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHH
Q 000224 634 IRKGLGVCPQYDILFPELTVREHLEMFA--------VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~--------~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~l 705 (1833)
.|++|||++|++.|.+.+||.+|+..+. .+-|+..++.+.++-++|+++|+.++..+++++|||||||||+|
T Consensus 79 ~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 79 LRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHH
Confidence 8999999999999999999999997643 33466666678889999999999999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||+.+|++++-|||+|+|||.+.+.+++.|+++. .|.|+|+.-|++|.|.++||||+-|++|+++..|++.+|.
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 999999999999999999999999999999999984 5999999999999999999999999999999999987664
No 89
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.9e-45 Score=403.64 Aligned_cols=211 Identities=28% Similarity=0.555 Sum_probs=193.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHHh-
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI- 634 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~- 634 (1833)
++++||+|.|........||+++||+|++||+++|+||+||||||||++|.|+.+||+|+|.++|.++.. .....
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 6789999999865545789999999999999999999999999999999999999999999999998863 23334
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccc-cccCCCChhHHHHHHHHHHHhCCC
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVN-IVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~-~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
|++|||++|+..|.|.+||.||+.+...+.+.+....+++++++++.+||.+..+ +++.+|||||||||+|||||+.+|
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P 161 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNP 161 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCC
Confidence 4779999999999999999999999998888876667888999999999997766 889999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
++++.||||.+||..+.+.++++++++. .|+|||++|||.+.|. .|||++.|.+|++
T Consensus 162 ~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 162 KIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred CeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 9999999999999999999999999994 4899999999999997 6999999999994
No 90
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-45 Score=400.25 Aligned_cols=223 Identities=30% Similarity=0.451 Sum_probs=202.9
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~ 636 (1833)
.++++||++.|+.+.....||+||||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|..... .....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 58999999999865544579999999999999999999999999999999999999999999999987643 2335678
Q ss_pred ceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 637 GLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 637 ~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~-~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
.|.+||||| .|.|..||.+.|.-.....|.++. ++++.++|+.+||.+ .+++++++|||||+||+||||||+.+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~--~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~P 160 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKS--QQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEP 160 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHH--HHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCC
Confidence 899999998 589999999999888777777654 455999999999985 579999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
++||||||||+||+....++|++|.++++ +-|.|++|||+..++.+||||+||++|++++.++..+++..
T Consensus 161 klLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 161 KLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred CEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 99999999999999999999999999975 56999999999999999999999999999999999888765
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-44 Score=436.47 Aligned_cols=224 Identities=29% Similarity=0.449 Sum_probs=206.5
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
.++|+++|++|.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..
T Consensus 4 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~-~~ 76 (351)
T PRK11432 4 KNFVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRS-IQ 76 (351)
T ss_pred CcEEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCC-HH
Confidence 357999999999953 45899999999999999999999999999999999999999999999999986533 23
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+++||||||++.+|+.+||+||+.+..+.++.++.+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~ 156 (351)
T PRK11432 77 QRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPK 156 (351)
T ss_pred HCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999998877777777777889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+|+.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 157 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 157 VLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999965444 6899999999999999999999999999999999998654
No 92
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-45 Score=401.94 Aligned_cols=224 Identities=31% Similarity=0.490 Sum_probs=203.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~--~~ 1540 (1833)
+++++++|+|+|| ...||+||||+|++||++||+|||||||||++|+|+|.++||+|+|.++|+++...+ ..
T Consensus 3 ~lL~v~~l~k~FG------Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~i 76 (250)
T COG0411 3 PLLEVRGLSKRFG------GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRI 76 (250)
T ss_pred ceeeeccceeecC------CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHH
Confidence 4789999999996 467999999999999999999999999999999999999999999999999997633 33
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc-------CC-----ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIK-------GV-----AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-------g~-----~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kq 1608 (1833)
.|..|+--+|...+|++|||.||+......+ +. ..++..+++.++|+.+||.+.+++++++||+||||
T Consensus 77 ar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR 156 (250)
T COG0411 77 ARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQR 156 (250)
T ss_pred HhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhH
Confidence 5677889999999999999999998764422 11 23556778889999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
||.|||||+.+|++|+||||.+||.|....++.+.|+++++ +++.||+++-|||+.+..+||||++|+.|+++++|+|+
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~ 235 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPE 235 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHH
Confidence 99999999999999999999999999999999999999974 34589999999999999999999999999999999999
Q ss_pred HHHhh
Q 000224 1689 HLKTR 1693 (1833)
Q Consensus 1689 ~l~~~ 1693 (1833)
++.+.
T Consensus 236 eV~~d 240 (250)
T COG0411 236 EVRNN 240 (250)
T ss_pred HHhcC
Confidence 98763
No 93
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-44 Score=437.18 Aligned_cols=223 Identities=30% Similarity=0.467 Sum_probs=205.7
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
.+|+++||+|+|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .+
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~-~~ 75 (353)
T TIGR03265 3 PYLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPP-QK 75 (353)
T ss_pred cEEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HH
Confidence 36999999999963 458999999999999999999999999999999999999999999999999865333 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
+.||||||+..+|+.+||+||+.+..+.++.+..+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|++
T Consensus 76 r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~l 155 (353)
T TIGR03265 76 RDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGL 155 (353)
T ss_pred CCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 78999999999999999999999987777777777778899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|||||||+|||+.+|+.+++.|+++.++.| .|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 156 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~~-~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 156 LLLDEPLSALDARVREHLRTEIRQLQRRLG-VTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999865444 6899999999999999999999999999999999998764
No 94
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-44 Score=400.82 Aligned_cols=214 Identities=30% Similarity=0.483 Sum_probs=191.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh----H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP----K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~----~ 1539 (1833)
+++++||+|.|+.+.. ...||+++||+|++||+++|+||+|||||||+++|.|+.+||+|+|.++|.++.... .
T Consensus 1 ~i~~~~v~k~y~~~~~--~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~ 78 (226)
T COG1136 1 MIELKNVSKIYGLGGE--KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELA 78 (226)
T ss_pred CcEEeeeEEEeccCCc--ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHH
Confidence 3679999999975432 257999999999999999999999999999999999999999999999999986522 2
Q ss_pred H-hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-CCCCCCChhHHHHHHHHHHHh
Q 000224 1540 A-ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-KPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1540 ~-~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~-~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
. .+++|||++|+..|.+.+||+||+.+...+.+.+....++.+.++++.+||.+..+ +++.+|||||||||+|||||+
T Consensus 79 ~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 79 KLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 2 35679999999999999999999999888888876556777888999999997666 889999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
.+|++|+.||||.+||..+.+.+++++++++++.| +|||++|||.+.+. .|||++.|.+|++
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g-~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERG-KTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 99999999999999999999999999999986655 68999999987766 7999999999994
No 95
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.7e-45 Score=382.33 Aligned_cols=216 Identities=31% Similarity=0.467 Sum_probs=203.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC----ChH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS----DPK 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~----~~~ 1539 (1833)
||+++|++|.|++ .+.||+||||+|++||++-|+||+||||||++|+|.+.++||+|+|.++|+|+.. +..
T Consensus 1 mI~f~~V~k~Y~~-----g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP 75 (223)
T COG2884 1 MIRFENVSKAYPG-----GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIP 75 (223)
T ss_pred CeeehhhhhhcCC-----CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccc
Confidence 5889999999985 3679999999999999999999999999999999999999999999999999865 223
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
-+|++||+|+||.-|.++.||.||+++..++.|.+++++++++.++|+.+||.+.++..+.+||||||||++||||++++
T Consensus 76 ~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~ 155 (223)
T COG2884 76 FLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQ 155 (223)
T ss_pred hhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|++||-||||-+|||....++++++.+++ +.| +|||+.|||.+.+..+-.|++.+.+|+++....
T Consensus 156 P~vLlADEPTGNLDp~~s~~im~lfeein-r~G-tTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 156 PAVLLADEPTGNLDPDLSWEIMRLFEEIN-RLG-TTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred CCeEeecCCCCCCChHHHHHHHHHHHHHh-hcC-cEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999996 444 899999999999999999999999999987653
No 96
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.3e-45 Score=428.36 Aligned_cols=203 Identities=22% Similarity=0.305 Sum_probs=170.4
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
.+.+++.++++.|..+ ....+.+++++++.-+..+++|+||+||||++|++.|...|+.|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p~----~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~---------- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPS----EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP---------- 425 (582)
T ss_pred CCeeEEEeeeccCCCc----chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc----------
Confidence 4679999999999643 22689999999999999999999999999999999999999999987643
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
|++|+|..|+..=+-++.|.+--.+-....|.++ +++++.+..+||. +.+.+++.+||||||-||++|.+...+|
T Consensus 426 r~ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~----ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~P 501 (582)
T KOG0062|consen 426 RLRIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTE----EEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNP 501 (582)
T ss_pred cceecchhHhhhhHHHHHhHHHHHHHHhCCCCCH----HHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCC
Confidence 5679999998543334555443333334456644 4566779999996 5677889999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE-ecCh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC-IGSP 1687 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~-~g~~ 1687 (1833)
.+|+|||||++||..+...+-+.|+.+ +| .||+||||.+++..+|+.+++.++|++.- .|..
T Consensus 502 hlLVLDEPTNhLD~dsl~AL~~Al~~F---~G--GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~ 564 (582)
T KOG0062|consen 502 HLLVLDEPTNHLDRDSLGALAKALKNF---NG--GVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGI 564 (582)
T ss_pred cEEEecCCCccccHHHHHHHHHHHHhc---CC--cEEEEECcHHHHhhcCceeEEEcCCcEEeeeccH
Confidence 999999999999999999999999987 23 49999999999999999999999999975 3444
No 97
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=411.09 Aligned_cols=225 Identities=28% Similarity=0.471 Sum_probs=208.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCC--CChHH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIR--SDPKA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~--~~~~~ 1540 (1833)
.+++++++++.|+++ ..+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. .....
T Consensus 2 ~~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~ 76 (235)
T COG1122 2 RMIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLE 76 (235)
T ss_pred ceEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHH
Confidence 368999999999742 57999999999999999999999999999999999999999999999999987 45678
Q ss_pred hccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
+|+++|||+|++ ..+-.-||.|.+.|.....|++.+++++++.++++.+++.+.+++++.+|||||||||+||.+|+.+
T Consensus 77 ~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~ 156 (235)
T COG1122 77 LRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMG 156 (235)
T ss_pred hhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcC
Confidence 899999999996 2333469999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|++|+|||||+||||.+++.+++.++++.++ ++.|||++|||++++..+|||+++|++|+++..|+|+++.+.
T Consensus 157 P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 157 PEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999754 346999999999999999999999999999999999888764
No 98
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-44 Score=436.58 Aligned_cols=221 Identities=27% Similarity=0.431 Sum_probs=205.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||+|.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+++
T Consensus 5 ~~l~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~-~~~~r~ 79 (351)
T PRK11432 5 NFVVLKNITKRFG----SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHR-SIQQRD 79 (351)
T ss_pred cEEEEEeEEEEEC----CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCC-CHHHCC
Confidence 4699999999995 34699999999999999999999999999999999999999999999999988642 234578
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
||||||++.+|+.+||+||+.|..+.++.++++.+++++++++.+||.+..++++++|||||||||+|||||+.+|++||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLL 159 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLL 159 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999887788888888999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||||+|||+.+|+++++.|+++.+ |+|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 160 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 160 FDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999853 89999999999999999999999999999999999888653
No 99
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-44 Score=436.54 Aligned_cols=223 Identities=28% Similarity=0.435 Sum_probs=204.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+|+++|++|+|++ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++
T Consensus 3 ~l~i~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~-~~r 76 (356)
T PRK11650 3 GLKLQAVRKSYDG-----KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEP-ADR 76 (356)
T ss_pred EEEEEeEEEEeCC-----CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHC
Confidence 5899999999932 2469999999999999999999999999999999999999999999999999865332 347
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+||||||++.+|+.+||+||+.+..+.++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 77 ~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ll 156 (356)
T PRK11650 77 DIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVF 156 (356)
T ss_pred CEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999999999999998877767766667778899999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
||||||+|||+.+++.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 157 LLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 157 LFDEPLSNLDAKLRVQMRLEIQRLHRRLK-TTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 99999999999999999999999865444 6899999999999999999999999999999999998654
No 100
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-44 Score=437.21 Aligned_cols=221 Identities=27% Similarity=0.441 Sum_probs=205.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||+|+|++ +.+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.... ..++.
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~-~~~r~ 77 (353)
T TIGR03265 3 PYLSIDNIRKRFGA----FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLP-PQKRD 77 (353)
T ss_pred cEEEEEEEEEEeCC----eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCC-HHHCC
Confidence 35999999999953 46999999999999999999999999999999999999999999999999886422 24678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+|||||++.+|+.+||+||+.|+.+.++.++++.+++++++++.+||.+..++++++|||||||||+|||||+.+|++||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llL 157 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLL 157 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998877777778888899999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||||++||+.+|+++++.|+++. + |.|+|++|||++|+..+||||++|++|++++.|++.++.++
T Consensus 158 LDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 158 LDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999985 3 89999999999999999999999999999999999888653
No 101
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.9e-44 Score=435.04 Aligned_cols=223 Identities=27% Similarity=0.417 Sum_probs=204.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc--eEEEEcCeeCCCChHHh
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD--GTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~--G~i~i~G~~i~~~~~~~ 1541 (1833)
.|+++||+|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|+++...+. .
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~-~ 77 (362)
T TIGR03258 5 GIRIDHLRVAYGA------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP-H 77 (362)
T ss_pred EEEEEEEEEEECC------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH-H
Confidence 4889999999963 469999999999999999999999999999999999999999 999999999865332 3
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++.|||++|++.+|+.+||+||+.+..+.++.+..+.+++++++++.++|.+..++++++|||||||||+|||||+.+|+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~ 157 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPD 157 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 56799999999999999999999998777777777777889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+|+.+++.|+++.++.+++|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 158 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 158 VLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999987543236899999999999999999999999999999999999765
No 102
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.2e-44 Score=436.70 Aligned_cols=220 Identities=27% Similarity=0.433 Sum_probs=204.6
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCc--ceEEEcCccCCccHHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT--GDALVFGKNITADMDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~--G~i~i~g~~i~~~~~~~r~ 636 (1833)
.++++||+|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+.+|++ |+|.++|.++... ...++
T Consensus 5 ~l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~-~~~~r 79 (362)
T TIGR03258 5 GIRIDHLRVAYGA----NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHA-PPHKR 79 (362)
T ss_pred EEEEEEEEEEECC----eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCC-CHHHC
Confidence 5899999999953 469999999999999999999999999999999999999999 9999999988532 22457
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
.||||+|++.+|+.+||+||+.|+...++.++.+.+++++++++.+||.+..++++++|||||||||+|||||+.+|++|
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999999999999999888777887788889999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-C--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-K--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
||||||+|||+.+|+++++.|+++. + |.|+|++|||++|+..+||||++|++|+++..|++.++..+
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999985 3 78999999999999999999999999999999999988654
No 103
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-44 Score=435.08 Aligned_cols=221 Identities=24% Similarity=0.411 Sum_probs=204.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.|+++||+|.|++ ++.+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.... ..++.|
T Consensus 3 ~l~i~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~-~~~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG---KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELE-PADRDI 78 (356)
T ss_pred EEEEEeEEEEeCC---CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCC-HHHCCE
Confidence 4899999999942 246999999999999999999999999999999999999999999999999885422 234789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|||||++.+|+.+||+||+.+..+.++.++.+.+++++++++.+||.+..++++++|||||||||+|||||+.+|++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLL 158 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLF 158 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999988777777777888999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
||||++||+.+|+.+++.|+++.+ |.|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 159 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 159 DEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999999853 89999999999999999999999999999999999888543
No 104
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=404.84 Aligned_cols=215 Identities=28% Similarity=0.479 Sum_probs=189.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||++.|.+ . .||+||||++++|++++|+||||||||||+|+|.|+++|++|+|.+.|.++..... +.+
T Consensus 3 ~~i~v~nl~v~y~~---~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~--~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGN---R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK--RLR 76 (254)
T ss_pred cEEEEeeeEEEECC---E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc--CCe
Confidence 46999999999953 2 59999999999999999999999999999999999999999999999987753321 467
Q ss_pred eEEEccCC---CCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000224 638 LGVCPQYD---ILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 638 ig~~~Q~~---~l~~~lTv~e~l~~~~~~~----~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
||||||.. .-|| +||+|-+..+..-+ +...+..+++++++|+.+|+.+.+++++++|||||+||+.|||||+
T Consensus 77 IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~ 155 (254)
T COG1121 77 IGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALA 155 (254)
T ss_pred EEEcCcccccCCCCC-cCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhc
Confidence 99999965 3355 69999998863222 1122334789999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
.+|++|+|||||+|+|+.++..+.++|+++++ |+||+++|||++.+..++|||+.|+ +++.|.|++++.
T Consensus 156 ~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 156 QNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999974 9999999999999999999999985 588999987553
No 105
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=411.94 Aligned_cols=221 Identities=32% Similarity=0.531 Sum_probs=197.3
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---HH
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---KA 1540 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~~ 1540 (1833)
|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ..
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 74 (235)
T cd03261 1 IELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYR 74 (235)
T ss_pred CeEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHH
Confidence 468999999952 4699999999999999999999999999999999999999999999999988542 2 34
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++.|||+||++.+++.+|++||+.+..... +.+.++..+++.++++.+++.+..++++++|||||||||+||+||+.+
T Consensus 75 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~ 154 (235)
T cd03261 75 LRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALD 154 (235)
T ss_pred HhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 6778999999999999999999998765433 344445566788899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 155 PELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999999999999999999999864334 589999999999999999999999999999999988764
No 106
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=407.81 Aligned_cols=219 Identities=38% Similarity=0.599 Sum_probs=198.1
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 i~~~~~~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 468999999953 46999999999999999999999999999999999999999999999999876544456778
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+....++....+.++++.++++.++|.+..++++.+|||||||||+||+||+.+|++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~lll 154 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLF 154 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999899999999999987766666555556678899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 155 LDEPTIGLDPQTRAHVWEYIEKLKEEFG-MTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999865434 5899999999999999999999999999999988765
No 107
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-44 Score=403.46 Aligned_cols=232 Identities=28% Similarity=0.436 Sum_probs=213.0
Q ss_pred eEEEEeEEEEcCCCc------------------cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCce
Q 000224 1464 IIYLRNLRKVYPGGK------------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDG 1525 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~------------------~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G 1525 (1833)
.|+++|+.|.||++. +.+....|+|+||+|++|||+.|+|-+|||||||+|+|.++++||+|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588999999998642 12345678999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCC-ChHH----hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCC
Q 000224 1526 TAFIFGKDIRS-DPKA----ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSF 1600 (1833)
Q Consensus 1526 ~i~i~G~~i~~-~~~~----~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~ 1600 (1833)
+|.++|.|+.. +..+ .|+++++|+|..+|+|..||.||..|...+.|+++++.++++.++|+.+||..+.++++.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 99999999865 3322 356799999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000224 1601 TLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1680 (1833)
Q Consensus 1601 ~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~ 1680 (1833)
+|||||||||.|||||+.+|+||++|||+|+|||--|.++.+-|.++.++-+ +|||++|||++|+.++.|||+||++|+
T Consensus 164 eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~-KTIvFitHDLdEAlriG~rIaimkdG~ 242 (386)
T COG4175 164 ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLK-KTIVFITHDLDEALRIGDRIAIMKDGE 242 (386)
T ss_pred cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhC-CeEEEEecCHHHHHhccceEEEecCCe
Confidence 9999999999999999999999999999999999999999999999976554 699999999999999999999999999
Q ss_pred EEEecChhHHHhhcCC
Q 000224 1681 LRCIGSPQHLKTRFGN 1696 (1833)
Q Consensus 1681 i~~~g~~~~l~~~~~~ 1696 (1833)
++..|+|+|+.....+
T Consensus 243 ivQ~Gtp~eIl~~PAn 258 (386)
T COG4175 243 IVQVGTPEEILLNPAN 258 (386)
T ss_pred EEEeCCHHHHHcCccH
Confidence 9999999999765443
No 108
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-44 Score=408.33 Aligned_cols=217 Identities=39% Similarity=0.603 Sum_probs=198.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++.+|
T Consensus 1 i~~~~~~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD----FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC----EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEE
Confidence 478999999953 4699999999999999999999999999999999999999999999999887543345677899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+||+||+.+.....+.+.++.+++++++++.+||.+..++++++||||||||++||+||+.+|+++|||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllD 156 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLD 156 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998877667666666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 157 EPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999985 4 89999999999999999999999999999999887654
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-44 Score=382.30 Aligned_cols=221 Identities=24% Similarity=0.436 Sum_probs=204.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc-----eEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD-----GTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~-----G~i~i~G~~i~~- 1536 (1833)
+.++++||++.|+ ++.||+|||++|++++++||+||+||||||++|++..+..... |+|.++|+++..
T Consensus 6 ~~~~~~~l~~yYg------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~ 79 (253)
T COG1117 6 PAIEVRDLNLYYG------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDP 79 (253)
T ss_pred ceeEecceeEEEC------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCC
Confidence 5689999999996 4679999999999999999999999999999999999988765 999999999965
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
+..++|++||+|+|.|.-|| +|++||+.+..++.|+.+++.++.+++.|+...|. +..++.+..|||||||||
T Consensus 80 ~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRL 158 (253)
T COG1117 80 KVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRL 158 (253)
T ss_pred CCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHH
Confidence 46789999999999999999 99999999999999988878888899999988885 457788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
||||||+-+|+|||||||||+|||.+...+.++|.++++ +-|||+|||+|..+.+++|+.++|..|++++.|+.+++
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 999999999999999999999999999999999999963 36999999999999999999999999999999999888
Q ss_pred Hhh
Q 000224 1691 KTR 1693 (1833)
Q Consensus 1691 ~~~ 1693 (1833)
...
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 754
No 110
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-43 Score=430.58 Aligned_cols=227 Identities=30% Similarity=0.513 Sum_probs=203.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+|+++||+|+|+.+. +++.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... . .
T Consensus 1 mi~i~~l~~~y~~~~--~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 78 (343)
T PRK11153 1 MIELKNISKVFPQGG--RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELR 78 (343)
T ss_pred CEEEEeEEEEeCCCC--CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHH
Confidence 478999999996311 135699999999999999999999999999999999999999999999999998642 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..+++|||+||++.+++.+|++||+.+.....+.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~ 158 (343)
T PRK11153 79 KARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASN 158 (343)
T ss_pred HHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999887766766656667788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++...
T Consensus 159 p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 159 PKVLLCDEATSALDPATTRSILELLKDINRELG-LTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999965444 6899999999999999999999999999999999988654
No 111
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=411.93 Aligned_cols=219 Identities=32% Similarity=0.556 Sum_probs=198.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
|+++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....|
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (235)
T cd03261 1 IELRGLTKSFGG----RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLR 76 (235)
T ss_pred CeEEEEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHh
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 2 24567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
+.+||+||++.+++.+||+||+.+..... +.+.++.++++.++++.+||.+..++++++|||||||||+|||||+.+|+
T Consensus 77 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~ 156 (235)
T cd03261 77 RRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPE 156 (235)
T ss_pred cceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999998875433 45556667789999999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 157 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 157 LLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999999999999999999985 38999999999999999999999999999999999877643
No 112
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-43 Score=431.39 Aligned_cols=224 Identities=32% Similarity=0.487 Sum_probs=204.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
|+++||+|+|+..++.+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632223579999999999999999999999999999999999999999999999998853 2 23457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
++|||+||++.+++.+||+||+.+.....+.+..+.++++.++++.+||.+..++++++||||||||++|||||+.+|++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~i 161 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKV 161 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 88999999999999999999999987777777767778899999999999989999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++...
T Consensus 162 LlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 162 LLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999985 3 89999999999999999999999999999999999888654
No 113
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-44 Score=394.04 Aligned_cols=241 Identities=31% Similarity=0.452 Sum_probs=217.8
Q ss_pred eEEEEeEEEEcCCCc---------------cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEE
Q 000224 1464 IIYLRNLRKVYPGGK---------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAF 1528 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~---------------~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~ 1528 (1833)
++.++||+|.|.... +.....||+|+||+|++||++|++|+||||||||+|||+|++.|++|.|.
T Consensus 3 ~i~~~~l~k~~~~~~k~pgl~g~l~~~~~~k~~~~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~ 82 (325)
T COG4586 3 MIMVENLSKNYPVAIKEPGLKGSLNHFFHRKERSIEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVR 82 (325)
T ss_pred eeEecccccccceeeeCchhHHHHHhhcCchhhhhhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEE
Confidence 577888888885321 01134699999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCChHHhccceEEEe-cCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHH
Q 000224 1529 IFGKDIRSDPKAARRLIGYCP-QFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1529 i~G~~i~~~~~~~~~~ig~~p-Q~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~k 1607 (1833)
++|++...+.++.-+++|+|. |...++.++.+.|.+.....++.++.++.+++.+.+.+.++|++..+.+++.||-|||
T Consensus 83 V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqR 162 (325)
T COG4586 83 VNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPALDSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQR 162 (325)
T ss_pred ecCcCcchhHHHHHHHHHHHhhhhheeeeechhhhhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHH
Confidence 999998777777777888875 5577888888999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
+|+.||.||+++|+||+|||||-|||..++..+++.|++++++++ +||++|||+|+.++++||||+.|++|+++.+|+.
T Consensus 163 mraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir~Flke~n~~~~-aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l 241 (325)
T COG4586 163 MRAELAAALLHPPKVLFLDEPTVGLDVNAQANIREFLKEYNEERQ-ATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTL 241 (325)
T ss_pred HHHHHHHHhcCCCcEEEecCCccCcchhHHHHHHHHHHHHHHhhC-ceEEEEecchhhHHHhhhheEEeeCCcEeecccH
Confidence 999999999999999999999999999999999999999987765 7999999999999999999999999999999999
Q ss_pred hHHHhhcCCeEEEEEeec
Q 000224 1688 QHLKTRFGNFLELEVKPT 1705 (1833)
Q Consensus 1688 ~~l~~~~~~~~~~~~~~~ 1705 (1833)
++|+.+|+...++.+...
T Consensus 242 ~~l~~~f~~~k~~~~el~ 259 (325)
T COG4586 242 AQLQEQFGPYKEFSVELK 259 (325)
T ss_pred HHHHHHhCCceEEEEEEc
Confidence 999999998877665543
No 114
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2e-43 Score=431.16 Aligned_cols=224 Identities=28% Similarity=0.482 Sum_probs=205.2
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
.++|+++|++|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .
T Consensus 12 ~~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~-~ 84 (375)
T PRK09452 12 SPLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPA-E 84 (375)
T ss_pred CceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-H
Confidence 357999999999963 468999999999999999999999999999999999999999999999999865332 3
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+++|||+||++.+|+.+||+||+.+..+.++.+..+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 85 ~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~ 164 (375)
T PRK09452 85 NRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPK 164 (375)
T ss_pred HCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 56799999999999999999999987776677666667788999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+|+.+++.|+++.++.| +|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 165 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 165 VLLLDESLSALDYKLRKQMQNELKALQRKLG-ITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999975444 6899999999999999999999999999999999998764
No 115
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-43 Score=432.03 Aligned_cols=221 Identities=24% Similarity=0.401 Sum_probs=204.5
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.
T Consensus 13 ~~L~l~~l~~~~~~----~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~-~~~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG----KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVP-AENRH 87 (375)
T ss_pred ceEEEEEEEEEECC----eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HHHCC
Confidence 46999999999953 46999999999999999999999999999999999999999999999999885422 23578
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+|||||++.+|+.+||+||+.|+.+.++.+..+.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998777777777778899999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||||++||+.+|+.+++.|+++.+ |.|+|++|||++|+..+||||++|++|+++..|++.++.++
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999853 89999999999999999999999999999999999887653
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-43 Score=430.55 Aligned_cols=224 Identities=29% Similarity=0.476 Sum_probs=205.7
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
..+|+++|++|+|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++...+ ..
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~ 89 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVP-PY 89 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HH
Confidence 357999999999952 46999999999999999999999999999999999999999999999999986533 24
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++.|||+||++.+|+.+||.||+.+..+.++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 90 ~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~ 169 (377)
T PRK11607 90 QRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPK 169 (377)
T ss_pred HCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999999999988776677766777888999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+|+.+++.|+++.++.| .|+|++|||++|+..+|||+++|++|+++..|+++++.++
T Consensus 170 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 170 LLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999865544 6899999999999999999999999999999999998764
No 117
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.8e-43 Score=428.10 Aligned_cols=222 Identities=25% Similarity=0.404 Sum_probs=200.9
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+|+++|++|+|++ +.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++...+ ..++
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~~r 74 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLH-ARDR 74 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCC-HHHC
Confidence 4889999999963 45999999999999999999999999999999999999999999999999986532 2356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
+||||||++.+++.+||+||+.+..... +.+.++.++++.++++.++|.+..++++.+|||||||||+|||||+.+
T Consensus 75 ~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~ 154 (353)
T PRK10851 75 KVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVE 154 (353)
T ss_pred CEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999999876542 344455667889999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|++|||||||+|||+.+++.+++.|+++.++.| +|+|++|||++++..+||||++|++|+++..|+++++.++
T Consensus 155 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g-~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 155 PQILLLDEPFGALDAQVRKELRRWLRQLHEELK-FTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999975434 6899999999999999999999999999999999998654
No 118
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.5e-43 Score=404.42 Aligned_cols=216 Identities=35% Similarity=0.582 Sum_probs=197.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|+++.+...+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++.+|
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 68999999996432222699999999999999999999999999999999999999999999999988654456678899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+||+||+.+....++.+..+.++++.++++.+|+.+..++++++||||||||++|||||+.+|++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlD 161 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLD 161 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998777667666667788999999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 162 EPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999985 5899999999999999999999999999998654
No 119
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.6e-43 Score=404.83 Aligned_cols=219 Identities=54% Similarity=0.863 Sum_probs=200.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++||++.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++++|
T Consensus 1 l~~~~l~~~~~~~--~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG--TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC--CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEE
Confidence 4689999999532 14699999999999999999999999999999999999999999999999988654455677899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|++|++.+++.+|++||+.+.....+.+..+.+++++++++.++|.+..++++++||||||||++|||||+.+|++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 158 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLD 158 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999989999999998877777666666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++
T Consensus 159 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 159 EPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999998789999999999999999999999999999999988765
No 120
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-43 Score=430.33 Aligned_cols=221 Identities=28% Similarity=0.420 Sum_probs=205.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++|++|.|+ +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++... ...++.
T Consensus 18 ~~l~l~~v~~~~~----~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~-~~~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD----GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHV-PPYQRP 92 (377)
T ss_pred ceEEEEeEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCC-CHHHCC
Confidence 4699999999995 34699999999999999999999999999999999999999999999999988532 235678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+|||||++.+|+.+||.||+.+..+.++.+..+.++++.++++.++|.+..++++++|||||||||+|||||+.+|++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999998877777777888899999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||||++||+.+|+++++.|+++. .|.|+|++|||++|+..+||||++|++|++++.|++.++.++
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 999999999999999999998874 389999999999999999999999999999999999888654
No 121
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.7e-43 Score=428.22 Aligned_cols=220 Identities=24% Similarity=0.408 Sum_probs=201.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.|+++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ...++++
T Consensus 2 ~L~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~-~~~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR----TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRL-HARDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC----eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-CHHHCCE
Confidence 3889999999953 4699999999999999999999999999999999999999999999999988542 2345789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~----~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
|||||++.+|+.+||+||+.+..... +.+.++.++++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~ 156 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQ 156 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999876542 34566678899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
+|||||||+|||+.+|+.+++.|++++ + |+|+|++|||++++..+||||++|++|+++..|++.++.++
T Consensus 157 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 157 ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999985 3 89999999999999999999999999999999999888543
No 122
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-43 Score=415.69 Aligned_cols=227 Identities=29% Similarity=0.466 Sum_probs=199.9
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC---hHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---PKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~---~~~ 1540 (1833)
.|+++||+|.|++... ..+.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 3889999999964210 124699999999999999999999999999999999999999999999999998652 245
Q ss_pred hccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc--cccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1541 ARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL--KHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~--~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
.+++|||+||++. .+..+||+||+.+.....+.+.++..+++.++++.+||. +..++++++||||||||++||+||+
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 6788999999863 223479999999876666777766777889999999997 5689999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYN-MTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999965434 689999999999999999999999999999999998764
No 123
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-43 Score=429.24 Aligned_cols=222 Identities=29% Similarity=0.458 Sum_probs=202.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
.|+++|++|+|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~-~~~ 75 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP-AER 75 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-hHC
Confidence 5899999999953 469999999999999999999999999999999999999999999999999865332 346
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+|||+||++.+++.+||+||+.+....++.+..+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 76 ~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lL 155 (369)
T PRK11000 76 GVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVF 155 (369)
T ss_pred CEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 79999999999999999999998776666666666678899999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+||||++|++|+++..|+++++.++
T Consensus 156 LLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 156 LLDEPLSNLDAALRVQMRIEISRLHKRLG-RTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999865444 6899999999999999999999999999999999988653
No 124
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-43 Score=430.51 Aligned_cols=219 Identities=28% Similarity=0.483 Sum_probs=202.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.|+++||+|.|++ +.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.|
T Consensus 3 ~l~i~~l~~~~~~----~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~-~~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD----VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVP-PAERGV 77 (369)
T ss_pred EEEEEEEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HhHCCE
Confidence 4899999999953 46999999999999999999999999999999999999999999999999885322 235679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|||||++.+|+.+||+||+.++...++.+.++.+++++++++.+||.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999987777777777778899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+|||+.+++.+++.|+++. + |+|+|++|||++++..+||||++|++|+++..|++.++..
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999984 3 8999999999999999999999999999999999988754
No 125
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.5e-43 Score=427.37 Aligned_cols=209 Identities=32% Similarity=0.479 Sum_probs=195.1
Q ss_pred cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHh----hcceEEEccCCCCCC
Q 000224 575 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEI----RKGLGVCPQYDILFP 649 (1833)
Q Consensus 575 ~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~----r~~ig~~~Q~~~l~~ 649 (1833)
.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.... |+++|||||++.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 4569999999999999999999999999999999999999999999999999864 33333 678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHH
Q 000224 650 ELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYS 729 (1833)
Q Consensus 650 ~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~ 729 (1833)
.+||+||+.+.....|.++++.++++.++++.+||++..++++++|||||||||+|||||+.+|++|||||||+||||.+
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~ 164 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLI 164 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999998888888877788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 730 MRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 730 r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
++++.+.+++++ .|+|||++|||++|+..+||||++|++|+++..|+++++...
T Consensus 165 r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 165 RDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999985 389999999999999999999999999999999999887653
No 126
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.2e-43 Score=425.33 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=195.1
Q ss_pred ccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh----ccceEEEecCCCCCC
Q 000224 1482 AKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA----RRLIGYCPQFDALLE 1556 (1833)
Q Consensus 1482 ~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~----~~~ig~~pQ~~~l~~ 1556 (1833)
.+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. +.... |++||||||++.+++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 4669999999999999999999999999999999999999999999999999875 34344 678999999999999
Q ss_pred CCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Q 000224 1557 YLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIA 1636 (1833)
Q Consensus 1557 ~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~ 1636 (1833)
.+||+||+.+.....|.+.++..+++.++++.+||....++++.+|||||||||+|||||+.+|++|||||||+||||.+
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~ 164 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLI 164 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999988777777776777889999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1637 KRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1637 ~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
++.+.+.+.++.++.| +|||++|||++|+..+||||++|++|+++..|+++++..+
T Consensus 165 r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 165 RDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 9999999999865444 6899999999999999999999999999999999998654
No 127
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-43 Score=402.44 Aligned_cols=211 Identities=33% Similarity=0.538 Sum_probs=191.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-~~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS----VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGV-PPERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC----eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcC-chhhccEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987532 22456899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.+.....+......++++.++++.+||.+..++++.+||||||||++|||||+.+|++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999988765555555566778899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.++++++++|++++ .|+|||++||++++++.+||||++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999984 3899999999999999999999999999998755
No 128
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-43 Score=401.14 Aligned_cols=213 Identities=33% Similarity=0.516 Sum_probs=190.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ..+++
T Consensus 1 l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~-~~~~~ 73 (213)
T cd03259 1 LELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP-PERRN 73 (213)
T ss_pred CeeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc-hhhcc
Confidence 468999999953 46999999999999999999999999999999999999999999999999886432 24567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+.....+......++++.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 74 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ll 153 (213)
T cd03259 74 IGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLL 153 (213)
T ss_pred EEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999888889999999876555555444455678889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 154 LDEPLSALDAKLREELREELKELQRELG-ITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999864444 58999999999999999999999999998765
No 129
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-43 Score=415.18 Aligned_cols=224 Identities=31% Similarity=0.513 Sum_probs=200.3
Q ss_pred eEEEEeeEEEecCCCC-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc---HHHh
Q 000224 559 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD---MDEI 634 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~---~~~~ 634 (1833)
.|+++||+|.|++..+ .+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ....
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 4889999999964221 24699999999999999999999999999999999999999999999999988542 2456
Q ss_pred hcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC--cccccccCCCChhHHHHHHHHHHHhC
Q 000224 635 RKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA--DKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 635 r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~--~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
++.+|||||++. .+...||+||+.++....+.+.++.++++.++++.+||. +..++++++||||||||++|||||+.
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~ 161 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAM 161 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHc
Confidence 789999999973 233579999999877767777777888999999999997 66899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|++|||||||+|||+.++++++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 162 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 162 EPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999985 3 8999999999999999999999999999999999887643
No 130
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.9e-43 Score=401.37 Aligned_cols=210 Identities=26% Similarity=0.475 Sum_probs=190.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~r 635 (1833)
++++|+++.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....|
T Consensus 2 l~~~~l~~~~~~~--~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 2 IRFEQVSKAYPGG--HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred eEEEEEEEEecCC--CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHH
Confidence 7899999999532 2359999999999999999999999999999999999999999999999998743 122457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+||.||+.+.....+...++.++++.++++.+||.+..++++.+||||||||++|||||+.+|++
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPL 159 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 78999999999999999999999877666666556677899999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++
T Consensus 160 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 160 LLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999985 589999999999999999999999999974
No 131
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=426.23 Aligned_cols=229 Identities=24% Similarity=0.420 Sum_probs=203.2
Q ss_pred eEEEEeEEEEcCCCc------------------cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCce
Q 000224 1464 IIYLRNLRKVYPGGK------------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDG 1525 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~------------------~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G 1525 (1833)
+|+++||+|.|+... ..+...+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 688899999887632 11233589999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCC-hHH----hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCC
Q 000224 1526 TAFIFGKDIRSD-PKA----ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSF 1600 (1833)
Q Consensus 1526 ~i~i~G~~i~~~-~~~----~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~ 1600 (1833)
+|+++|.++... ... .++++||+||++.+++.+|++||+.+....++.+..+.++++.++++.++|.+..+++++
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc
Confidence 999999998652 222 245799999999999999999999988777776665666778899999999989999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000224 1601 TLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1680 (1833)
Q Consensus 1601 ~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~ 1680 (1833)
+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+||||++|++|+
T Consensus 164 ~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dri~vL~~G~ 242 (400)
T PRK10070 164 ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDRIAIMQNGE 242 (400)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999864444 689999999999999999999999999
Q ss_pred EEEecChhHHHhh
Q 000224 1681 LRCIGSPQHLKTR 1693 (1833)
Q Consensus 1681 i~~~g~~~~l~~~ 1693 (1833)
+++.|+++++.++
T Consensus 243 i~~~g~~~~l~~~ 255 (400)
T PRK10070 243 VVQVGTPDEILNN 255 (400)
T ss_pred EEecCCHHHHHhC
Confidence 9999999988654
No 132
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-42 Score=426.30 Aligned_cols=227 Identities=26% Similarity=0.456 Sum_probs=201.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
.+|+++||+|.|+ ++.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.. ...+.
T Consensus 2 ~~L~~~nls~~y~------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~ 75 (402)
T PRK09536 2 PMIDVSDLSVEFG------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAA 75 (402)
T ss_pred ceEEEeeEEEEEC------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHH
Confidence 3689999999995 3569999999999999999999999999999999999999999999999999876 45667
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc--CCC--hhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIK--GVA--EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g~~--~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
+++|||+||++.+++.+|++||+.+....+ ... ....+++++++++.+++.+..++++.+||||||||++|||||+
T Consensus 76 ~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~ 155 (402)
T PRK09536 76 SRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALA 155 (402)
T ss_pred hcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 788999999999988999999998743211 111 2334567889999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH------HH
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH------LK 1691 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~------l~ 1691 (1833)
++|++|||||||+|||+.+++.++++|+++++ +| +|||++|||++++.++|||+++|++|++++.|++++ +.
T Consensus 156 ~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~~l~ 233 (402)
T PRK09536 156 QATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTADTLR 233 (402)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcHHHH
Confidence 99999999999999999999999999999974 44 589999999999999999999999999999999987 44
Q ss_pred hhcCCe
Q 000224 1692 TRFGNF 1697 (1833)
Q Consensus 1692 ~~~~~~ 1697 (1833)
+.|+..
T Consensus 234 ~~~~~~ 239 (402)
T PRK09536 234 AAFDAR 239 (402)
T ss_pred HHhCCc
Confidence 556543
No 133
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.7e-43 Score=399.56 Aligned_cols=218 Identities=33% Similarity=0.555 Sum_probs=195.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++|++|+|++.. ....+++++||++++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.......++
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 78 (218)
T cd03266 1 MITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARR 78 (218)
T ss_pred CeEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHh
Confidence 478999999996421 112699999999999999999999999999999999999999999999999998755556678
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
++||+||++.+++.+|++||+.+....++.+..+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|
T Consensus 79 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~il 158 (218)
T cd03266 79 RLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVL 158 (218)
T ss_pred hEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999999998999999998776666655556677889999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|++|++++.|
T Consensus 159 llDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 159 LLDEPTTGLDVMATRALREFIRQLR-ALG-KCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999985 344 58999999999999999999999999998654
No 134
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-42 Score=403.39 Aligned_cols=222 Identities=32% Similarity=0.502 Sum_probs=199.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc----HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 635 (1833)
|+++||++.|+++.+.+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431113699999999999999999999999999999999999999999999999987531 12346
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+|++||+.+.....+.......+++.++++.+||.+..++++.+||||||||++|||||+.+|++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 161 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKV 161 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 78999999999999999999998876666665555677889999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 162 llLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 162 LLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred EEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999985 3 899999999999999999999999999999999887664
No 135
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-42 Score=403.91 Aligned_cols=221 Identities=29% Similarity=0.452 Sum_probs=195.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .++
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~ 74 (239)
T cd03296 2 SIEVRNVSKRFGD------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV-QER 74 (239)
T ss_pred EEEEEeEEEEECC------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-ccc
Confidence 4889999999953 469999999999999999999999999999999999999999999999998754222 356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCC----ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGV----AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~----~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
++||+||++.+++.+|++||+.+....++. ...+..+.+.++++.++|.+..++++.+|||||||||+||+||+.+
T Consensus 75 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 154 (239)
T cd03296 75 NVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVE 154 (239)
T ss_pred ceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 799999999998889999999876554432 2233445678899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 155 PKVLLLDEPFGALDAKVRKELRRWLRRLHDELH-VTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999999864434 589999999999999999999999999999999988753
No 136
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-42 Score=426.13 Aligned_cols=225 Identities=30% Similarity=0.467 Sum_probs=201.5
Q ss_pred eEEEEeeEEEecCCC--------------------CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcc
Q 000224 559 CIQIRKLHKVYATKR--------------------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTG 618 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~--------------------~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G 618 (1833)
.|+++||+|.|+... +...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 477777777776532 123489999999999999999999999999999999999999999
Q ss_pred eEEEcCccCCc-cHH---H-hhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccC
Q 000224 619 DALVFGKNITA-DMD---E-IRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVR 693 (1833)
Q Consensus 619 ~i~i~g~~i~~-~~~---~-~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~ 693 (1833)
+|.++|.++.. +.. + .++++|||||++.+|+.+||+||+.+.....+.+.++.++++.++++.+||.+..+++++
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc
Confidence 99999999853 221 2 246899999999999999999999998877777777777889999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 694 ALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 694 ~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|++++ .|+|||++||+++++..+||||++|++|++
T Consensus 164 ~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i 243 (400)
T PRK10070 164 ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEV 243 (400)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999984 489999999999999999999999999999
Q ss_pred EeecCHHHHHhh
Q 000224 772 KCCGSSLFLKHQ 783 (1833)
Q Consensus 772 ~~~G~~~~Lk~~ 783 (1833)
++.|++.++...
T Consensus 244 ~~~g~~~~l~~~ 255 (400)
T PRK10070 244 VQVGTPDEILNN 255 (400)
T ss_pred EecCCHHHHHhC
Confidence 999999887543
No 137
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=402.16 Aligned_cols=226 Identities=30% Similarity=0.497 Sum_probs=199.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+|+++|++++|++.. +.+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~i~~~~l~~~~~~~~--~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (233)
T cd03258 1 MIELKNVSKVFGDTG--GKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELR 78 (233)
T ss_pred CeEEecceEEccCCC--CceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHH
Confidence 478999999996310 112699999999999999999999999999999999999999999999999988642 2 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..++.+||+||++.+++.+|++||+.+....++.......+.+.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 79 ~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 158 (233)
T cd03258 79 KARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANN 158 (233)
T ss_pred HHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 34678999999999998899999998766555555444556788899999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 159 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 159 PKVLLCDEATSALDPETTQSILALLRDINRELG-LTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred CCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999864434 689999999999999999999999999999999887753
No 138
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-42 Score=398.56 Aligned_cols=212 Identities=31% Similarity=0.495 Sum_probs=189.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+++++|++++|+++ .+.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|+++... . .
T Consensus 1 ~l~~~~l~~~~~~~----~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 76 (216)
T TIGR00960 1 MIRFEQVSKAYPGG----HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIP 76 (216)
T ss_pred CeEEEEEEEEecCC----CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHH
Confidence 47899999999631 24599999999999999999999999999999999999999999999999987532 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..++++||+||++.+++.+|++||+.+.....+....+.++++.++++.+++.+..++++.+|||||||||+||+||+.+
T Consensus 77 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (216)
T TIGR00960 77 FLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHK 156 (216)
T ss_pred HHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 35678999999999999999999998876665655444566788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||+++++.+|||+++|++|++
T Consensus 157 p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 157 PPLLLADEPTGNLDPELSRDIMRLFEEFNR-RG-TTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999863 44 5899999999999999999999999975
No 139
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=415.16 Aligned_cols=223 Identities=26% Similarity=0.441 Sum_probs=199.4
Q ss_pred eEEEEeeEEEecCCC-CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--------
Q 000224 559 CIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 629 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~-~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 629 (1833)
.|+++||++.|+++. ....+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996432 12369999999999999999999999999999999999999999999999876521
Q ss_pred -----------------cHHHhhcceEEEccCC-CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-ccccc
Q 000224 630 -----------------DMDEIRKGLGVCPQYD-ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNI 690 (1833)
Q Consensus 630 -----------------~~~~~r~~ig~~~Q~~-~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~ 690 (1833)
.....++.||||||++ ..+...||+||+.|.....+.+.++.++++.++++.+||. +..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 2345678899999986 2334579999999887777888888888999999999997 67899
Q ss_pred ccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCC
Q 000224 691 VVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANG 769 (1833)
Q Consensus 691 ~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G 769 (1833)
++.+||||||||++||+||+.+|++|||||||+|||+.+++.++++|++++ +|+|||++|||++++..+||||++|++|
T Consensus 162 ~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G 241 (305)
T PRK13651 162 SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDG 241 (305)
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999999985 5899999999999999999999999999
Q ss_pred EEEeecCHHHHH
Q 000224 770 SLKCCGSSLFLK 781 (1833)
Q Consensus 770 ~l~~~G~~~~Lk 781 (1833)
++++.|++.++.
T Consensus 242 ~i~~~g~~~~~~ 253 (305)
T PRK13651 242 KIIKDGDTYDIL 253 (305)
T ss_pred EEEEECCHHHHh
Confidence 999999987764
No 140
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-42 Score=396.90 Aligned_cols=211 Identities=34% Similarity=0.620 Sum_probs=193.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++|+++.|++ +.+++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++.......++.+|
T Consensus 1 i~~~~~~~~~~~----~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK----KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC----EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheE
Confidence 468999999953 36999999999999 9999999999999999999999999999999999987543345678899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+||.||+.+.....+.+.++.+++++++++.+||.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 155 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVD 155 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998776666665566778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 156 EPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999987799999999999999999999999999998754
No 141
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.4e-42 Score=398.79 Aligned_cols=220 Identities=55% Similarity=0.928 Sum_probs=198.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|++|.|+++ .+.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 l~~~~l~~~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG----TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC----CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 4689999999631 246999999999999999999999999999999999999999999999999986544556778
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+....++.+..+..+.+.++++.++|.+..++++.+||||||||++||+||+.+|++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 156 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLL 156 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999998889999999987776666555555678889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++++
T Consensus 157 lDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 220 (220)
T cd03263 157 LDEPTSGLDPASRRAIWDLILEVR-K-G-RSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQELK 220 (220)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHh-c-C-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHcC
Confidence 999999999999999999999985 3 3 58999999999999999999999999999999988753
No 142
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.2e-42 Score=401.30 Aligned_cols=223 Identities=27% Similarity=0.471 Sum_probs=199.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++|++++|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~ 74 (236)
T TIGR03864 1 ALEVAGLSFAYGA------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALA 74 (236)
T ss_pred CEEEEeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhh
Confidence 4789999999952 4699999999999999999999999999999999999999999999999988653334456
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
.++|+||++.+++.+|++||+.+....++....+..+.+.++++.+|+.+..++++.+||||||||++|||||+.+|++|
T Consensus 75 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~ll 154 (236)
T TIGR03864 75 RLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALL 154 (236)
T ss_pred hEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 89999999988888999999988766655554445567888999999998889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
||||||+|||+.+++.+++.|+++++++| +|||++||++++++. |||+++|++|++++.|+++++.+.+
T Consensus 155 llDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (236)
T TIGR03864 155 LLDEPTVGLDPASRAAIVAHVRALCRDQG-LSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRGAL 223 (236)
T ss_pred EEcCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHHHc
Confidence 99999999999999999999999864344 589999999999985 9999999999999999999887654
No 143
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.1e-42 Score=420.76 Aligned_cols=228 Identities=25% Similarity=0.422 Sum_probs=200.3
Q ss_pred EEEEeEEEEcCCCc------------------cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceE
Q 000224 1465 IYLRNLRKVYPGGK------------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGT 1526 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~------------------~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~ 1526 (1833)
|+++||.|.||.++ +.+...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+
T Consensus 1 ~~~~~~~k~fg~~~~~~~~~~~~g~~~~~~~~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~ 80 (382)
T TIGR03415 1 IDFKNVDVVFGDQPAEALALLDQGKTREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGS 80 (382)
T ss_pred CEEEeeEEeeCCCHHHHHHHHHcCCCHHHHHHhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcE
Confidence 35677777776432 124567999999999999999999999999999999999999999999
Q ss_pred EEEcCe----eCCC-ChH---Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCC
Q 000224 1527 AFIFGK----DIRS-DPK---AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKK 1597 (1833)
Q Consensus 1527 i~i~G~----~i~~-~~~---~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~ 1597 (1833)
|+++|+ ++.. +.. +. +++|||+||++.+++.+|++||+.+.....+.++.+.++++.++++.+||.+..++
T Consensus 81 I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~ 160 (382)
T TIGR03415 81 VLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK 160 (382)
T ss_pred EEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC
Confidence 999997 4432 222 22 35799999999999999999999988777777766666788999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE
Q 000224 1598 PSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV 1677 (1833)
Q Consensus 1598 ~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~ 1677 (1833)
++.+||||||||++|||||+.+|+||||||||+||||.+++.+++.|.++.++.+ +|||++|||++++.++||||++|+
T Consensus 161 ~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~~l~DrI~vl~ 239 (382)
T TIGR03415 161 KPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEALKIGNRIAIME 239 (382)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999965444 689999999999999999999999
Q ss_pred CCEEEEecChhHHHhh
Q 000224 1678 GGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1678 ~G~i~~~g~~~~l~~~ 1693 (1833)
+|+++..|+++++..+
T Consensus 240 ~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 240 GGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCEEEEecCHHHHhhC
Confidence 9999999999998653
No 144
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=412.13 Aligned_cols=221 Identities=30% Similarity=0.472 Sum_probs=199.5
Q ss_pred EEEEeeEEEecCCC-CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHHH
Q 000224 560 IQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDE 633 (1833)
Q Consensus 560 i~i~~l~k~y~~~~-~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~ 633 (1833)
|+++||++.|+... ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. ....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996421 12359999999999999999999999999999999999999999999999998742 2345
Q ss_pred hhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHh
Q 000224 634 IRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 634 ~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
.|+.+||++|++ .+++ .||.||+.|.....+.+..+.++++.++++.+||. +..++.+++||||||||++|||||+
T Consensus 82 ~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~ 160 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILA 160 (288)
T ss_pred HHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHH
Confidence 778999999987 5665 59999999887766777777888999999999996 5679999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
.+|++|||||||+|||+.+++.++++|++++ +|+|||++|||++++..+||||++|++|++++.|++.++.
T Consensus 161 ~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 232 (288)
T PRK13643 161 MEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVF 232 (288)
T ss_pred hCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999986 5899999999999999999999999999999999998764
No 145
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-42 Score=397.99 Aligned_cols=216 Identities=30% Similarity=0.486 Sum_probs=192.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++|.|++.. +.+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+++
T Consensus 1 l~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~----~~~~ 74 (220)
T cd03293 1 LEVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG----PGPD 74 (220)
T ss_pred CeEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc----ccCc
Confidence 46899999996321 11469999999999999999999999999999999999999999999999998752 3567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+....++.+.....+.+.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 75 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lll 154 (220)
T cd03293 75 RGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLL 154 (220)
T ss_pred EEEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999888889999999887666665544555678899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecCh
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSP 1687 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~--~G~i~~~g~~ 1687 (1833)
|||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|+ +|++++.++.
T Consensus 155 LDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 155 LDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999864444 589999999999999999999999 7999988765
No 146
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.9e-42 Score=424.37 Aligned_cols=225 Identities=26% Similarity=0.446 Sum_probs=202.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||++.|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+.+++
T Consensus 3 ~L~~~nls~~y~----~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 3 MIDVSDLSVEFG----DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRR 78 (402)
T ss_pred eEEEeeEEEEEC----CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcc
Confidence 589999999995 3569999999999999999999999999999999999999999999999998864 45567788
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhc--CCC--HHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLK--GVK--EELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~--~~~--~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
+|+|+|++.+++.+||+||+.+....+ ... ....+++++++++.+|+.+..++++++||||||||++|||||+++|
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999988999999998754221 111 2345678999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHH------HHhhhCC
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF------LKHQYGV 786 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~------Lk~~~g~ 786 (1833)
++|||||||+|||+.++++++++|+++. +|+|||++||+++++..+|||+++|++|++++.|++++ +.+.|+.
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~~l~~~~~~ 238 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTADTLRAAFDA 238 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcHHHHHHhCC
Confidence 9999999999999999999999999986 58999999999999999999999999999999999986 5566664
Q ss_pred c
Q 000224 787 G 787 (1833)
Q Consensus 787 g 787 (1833)
.
T Consensus 239 ~ 239 (402)
T PRK09536 239 R 239 (402)
T ss_pred c
Confidence 3
No 147
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-42 Score=411.51 Aligned_cols=225 Identities=27% Similarity=0.423 Sum_probs=198.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----ChH
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DPK 1539 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-----~~~ 1539 (1833)
++++||+|+|++... ..+.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ...
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 789999999964211 12469999999999999999999999999999999999999999999999998852 234
Q ss_pred HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHH
Q 000224 1540 AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
..+++||||||++ .++ ..||+||+.+.....+.+..+.++++.++++.++|. +..++++.+|||||||||+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL 160 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVL 160 (290)
T ss_pred HHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 5677899999986 455 479999998876656666666667788999999997 567999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 161 ~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g-~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 161 AMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKG-LTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999965444 689999999999999999999999999999999988754
No 148
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2e-42 Score=417.44 Aligned_cols=226 Identities=24% Similarity=0.391 Sum_probs=202.6
Q ss_pred ceEEEEeeEEEecCCC---------CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC
Q 000224 558 RCIQIRKLHKVYATKR---------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT 628 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~---------~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~ 628 (1833)
..++++||++.|+.++ +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 5799999999996422 1357999999999999999999999999999999999999999999999999885
Q ss_pred c----cHHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhH
Q 000224 629 A----DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLK--GVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGM 699 (1833)
Q Consensus 629 ~----~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~--~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGq 699 (1833)
. +....|++|||++|++ .+++.+||.||+.+..... +.++++.++++.++++.+||. +..++.+++|||||
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~ 166 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQ 166 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHH
Confidence 3 2334677899999998 5888999999998865543 366677788899999999995 46799999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCH
Q 000224 700 KRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 777 (1833)
Q Consensus 700 kqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~ 777 (1833)
|||++|||||+.+|++|||||||+|||+.++++++++|+++++ |.|+|++|||++++..+||||++|.+|++++.|++
T Consensus 167 ~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~ 246 (331)
T PRK15079 167 CQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTY 246 (331)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 9999999999999999999999999999999999999999853 89999999999999999999999999999999999
Q ss_pred HHHHhh
Q 000224 778 LFLKHQ 783 (1833)
Q Consensus 778 ~~Lk~~ 783 (1833)
.++.+.
T Consensus 247 ~~i~~~ 252 (331)
T PRK15079 247 DEVYHN 252 (331)
T ss_pred HHHHcC
Confidence 887644
No 149
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-42 Score=402.80 Aligned_cols=218 Identities=32% Similarity=0.534 Sum_probs=195.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHH-hhcc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDE-IRKG 637 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~-~r~~ 637 (1833)
++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .... .++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (236)
T cd03219 1 LEVRGLTKRFGG----LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLG 76 (236)
T ss_pred CeeeeeEEEECC----EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcC
Confidence 468999999952 469999999999999999999999999999999999999999999999998754 2222 3567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCC----------CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGV----------KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~----------~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~ 707 (1833)
+||+||++.+++.+||+||+.+.....+. ...+.++++.++++.+|+.+..++++++||||||||++|||
T Consensus 77 i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 77 IGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999999999999999887654322 23445677899999999998889999999999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 9999999999999999999999999999999986 6899999999999999999999999999999999987764
No 150
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-42 Score=412.56 Aligned_cols=221 Identities=31% Similarity=0.482 Sum_probs=198.7
Q ss_pred EEEEeeEEEecCCCC-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHHH
Q 000224 560 IQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDE 633 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~ 633 (1833)
++++||+|.|++..+ .+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 789999999964221 2469999999999999999999999999999999999999999999999998842 2445
Q ss_pred hhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHh
Q 000224 634 IRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 634 ~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
.|+.+|||||++ .++ ..||+||+.+.....+.+.++.+++++++++.+||. +..++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 678899999986 455 469999999877666777777778899999999997 5679999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
.+|++|||||||+|||+.++++++++|++++ + |.|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIF 234 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999985 3 899999999999999999999999999999999987764
No 151
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1e-42 Score=399.30 Aligned_cols=211 Identities=31% Similarity=0.523 Sum_probs=188.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH----HHh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM----DEI 634 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~----~~~ 634 (1833)
|+++||++.|++.++.+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +. ...
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4689999999642111469999999999999999999999999999999999999999999999998753 11 124
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
++.+||+||++.+++.+||+||+.+....++......++++.++++.+||.+..++++++||||||||++|||||+.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 160 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPK 160 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCC
Confidence 56899999999999999999999987766666555566789999999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
+|||||||+|||+.+++.++++|+++++ |+|||++||++++++ +|||+++|++|++
T Consensus 161 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 161 IILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999853 899999999999998 8999999999974
No 152
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-42 Score=403.09 Aligned_cols=219 Identities=26% Similarity=0.404 Sum_probs=196.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.++++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.+
T Consensus 2 ~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD----FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVP-VQERNV 76 (239)
T ss_pred EEEEEeEEEEECC----EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCC-ccccce
Confidence 3789999999953 46999999999999999999999999999999999999999999999999875321 235679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGV----KEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~----~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
||+||++.+++.+||.||+.+.....+. ...+.+++++++++.+||.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 156 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPK 156 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999887654433 334456678899999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 157 VLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999985 3 8999999999999999999999999999999999877643
No 153
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.8e-42 Score=401.17 Aligned_cols=217 Identities=32% Similarity=0.542 Sum_probs=196.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH-HHhhcc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIRKG 637 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r~~ 637 (1833)
++++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +. ...++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (232)
T cd03218 1 LRAENLSKRYGK----RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLG 76 (232)
T ss_pred CeEEEEEEEeCC----EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhcc
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 22 223567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+||+||++.+++.+|++||+.+....++....+.+++++++++.+|+.+..++.+++||||||||++|||||+.+|++||
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 156 (232)
T cd03218 77 IGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLL 156 (232)
T ss_pred EEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987665565555566788999999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++
T Consensus 157 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 157 LDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999986 589999999999999999999999999999999987665
No 154
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.9e-42 Score=395.68 Aligned_cols=213 Identities=31% Similarity=0.489 Sum_probs=191.1
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .+++
T Consensus 1 i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~-~~~~ 73 (213)
T cd03301 1 VELENVTKRFGN------VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPP-KDRD 73 (213)
T ss_pred CEEEeeEEEECC------eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-ccce
Confidence 468999999953 469999999999999999999999999999999999999999999999998854222 2467
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
++|+||++.+++.+|++||+.+....++...++.++++.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~lll 153 (213)
T cd03301 74 IAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFL 153 (213)
T ss_pred EEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999888889999999887666565555556678889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 154 MDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999865444 58999999999999999999999999998875
No 155
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-42 Score=397.86 Aligned_cols=213 Identities=32% Similarity=0.502 Sum_probs=192.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||+|.|++..+.+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .++.+|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~----~~~~i~ 76 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG----PGPDRG 76 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc----ccCcEE
Confidence 4689999999642212469999999999999999999999999999999999999999999999988752 357799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+|++||+.+....++.+.+..+++++++++.+||.+..++++++||||||||++|||||+.+|+++|||
T Consensus 77 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLD 156 (220)
T cd03293 77 YVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLD 156 (220)
T ss_pred EEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999999998999999998776666665666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEee--CCEEEeecC
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGS 776 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~--~G~l~~~G~ 776 (1833)
|||+|||+.+++.++++|+++. .|+|||++||+++++..+|||+++|+ +|+++..++
T Consensus 157 EPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~ 217 (220)
T cd03293 157 EPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVE 217 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEE
Confidence 9999999999999999999983 38999999999999999999999999 799987765
No 156
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.4e-42 Score=414.57 Aligned_cols=231 Identities=23% Similarity=0.337 Sum_probs=202.3
Q ss_pred cceEEEEeEEEEcCCCcc-------ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC
Q 000224 1462 NAIIYLRNLRKVYPGGKR-------SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI 1534 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~-------~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i 1534 (1833)
+++|+++||+|.|+.+.. .+...+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 468999999999964210 0135699999999999999999999999999999999999999999999999998
Q ss_pred CCC-h---HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHc--CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChh
Q 000224 1535 RSD-P---KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIK--GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGG 1605 (1833)
Q Consensus 1535 ~~~-~---~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~--g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG 1605 (1833)
... . ...+++|||++|++ .+++.+|+.||+.+..... +.++++.++.+.++++.++|. +..++++++||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 642 2 23567899999997 6888999999998765443 355566677788999999995 5689999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1606 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1606 ~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+||+||+.+|++|||||||+|||+.+++.++++|+++.++.| .|||++|||++++..+||||++|.+|++++.|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~-~til~iTHdl~~~~~~~dri~vl~~G~ive~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMG-LSLIFIAHDLAVVKHISDRVLVMYLGHAVELG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEEc
Confidence 99999999999999999999999999999999999999999965444 68999999999999999999999999999999
Q ss_pred ChhHHHhh
Q 000224 1686 SPQHLKTR 1693 (1833)
Q Consensus 1686 ~~~~l~~~ 1693 (1833)
+++++.+.
T Consensus 245 ~~~~i~~~ 252 (331)
T PRK15079 245 TYDEVYHN 252 (331)
T ss_pred CHHHHHcC
Confidence 99988654
No 157
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.1e-42 Score=420.73 Aligned_cols=210 Identities=29% Similarity=0.451 Sum_probs=191.9
Q ss_pred CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCc----cCCc-c---HHHhh-cceEEEccC
Q 000224 574 GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGK----NITA-D---MDEIR-KGLGVCPQY 644 (1833)
Q Consensus 574 ~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~----~i~~-~---~~~~r-~~ig~~~Q~ 644 (1833)
+.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++.. + ..+.| +++|||||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~ 114 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQK 114 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECC
Confidence 3467999999999999999999999999999999999999999999999996 4432 1 22333 689999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCC
Q 000224 645 DILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSG 724 (1833)
Q Consensus 645 ~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsg 724 (1833)
+.+++.+||+||+.++....+.++.+.++++.++++.+||.+..++++.+||||||||++|||||+.+|+||||||||+|
T Consensus 115 ~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~ 194 (382)
T TIGR03415 115 FALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSA 194 (382)
T ss_pred CcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 99999999999999987777877777788999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 725 MDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 725 LD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
|||.+++++++.|+++++ ++|||++|||++++..+||||++|++|+++..|+++++..+
T Consensus 195 LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 195 LDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999853 89999999999999999999999999999999999888543
No 158
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=413.02 Aligned_cols=230 Identities=24% Similarity=0.379 Sum_probs=200.4
Q ss_pred CCCcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-
Q 000224 1459 SVDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD- 1537 (1833)
Q Consensus 1459 ~~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~- 1537 (1833)
..+.++|+++|+++.|++... ..+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++...
T Consensus 16 ~~~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~ 94 (320)
T PRK13631 16 LSDDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKK 94 (320)
T ss_pred CCCCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccc
Confidence 344568999999999964210 124599999999999999999999999999999999999999999999999987532
Q ss_pred ----------------hHHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCC
Q 000224 1538 ----------------PKAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKP 1598 (1833)
Q Consensus 1538 ----------------~~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~ 1598 (1833)
....+++||||+|++ .+++ .|++||+.+.....+.+.++..+++.++++.++|. +..++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~ 173 (320)
T PRK13631 95 NNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERS 173 (320)
T ss_pred ccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCC
Confidence 245678899999986 4665 59999998765444566666667788999999996 578999
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC
Q 000224 1599 SFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG 1678 (1833)
Q Consensus 1599 ~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~ 1678 (1833)
+.+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+||||++|++
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g-~TiiivtHd~~~~~~~adri~vl~~ 251 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NN-KTVFVITHTMEHVLEVADEVIVMDK 251 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999999863 44 6899999999999999999999999
Q ss_pred CEEEEecChhHHHh
Q 000224 1679 GQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1679 G~i~~~g~~~~l~~ 1692 (1833)
|++++.|+++++..
T Consensus 252 G~i~~~g~~~~~~~ 265 (320)
T PRK13631 252 GKILKTGTPYEIFT 265 (320)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999998754
No 159
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.6e-42 Score=396.22 Aligned_cols=211 Identities=27% Similarity=0.487 Sum_probs=192.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++|+++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 1 i~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~-~~~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN----VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLP-PKDRDIA 75 (213)
T ss_pred CEEEeeEEEECC----eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCC-cccceEE
Confidence 468999999953 36999999999999999999999999999999999999999999999999875321 2246799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.++....+...++.+++++++++.+|+.+..++++++||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999998766666666667788999999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.++++|++++ .|+|||++||+++++..+||||++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999985 3899999999999999999999999999998765
No 160
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-42 Score=407.23 Aligned_cols=221 Identities=27% Similarity=0.429 Sum_probs=196.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+|+++|++|.|++ .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 4 ~l~~~~l~~~~~~-----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKD-----GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCC-----CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 6899999999952 2459999999999999999999999999999999999999999999999999864 344567
Q ss_pred cceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++|||+||++. .+..+|++||+.+.....+.+..+.++++.++++.++|.+..++++.+||||||||++||+||+.+|+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~ 158 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPD 158 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 78999999962 34468999999876555566555566778899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+|||||||+|||+.+++.++++|+++++ +| +|||++||+++++.++||||++|++|++++.|+++++.
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 159 VIVLDEPMAYLDPRGQETLMEILDRLHN-QG-KTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred EEEEECCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999864 44 68999999999999999999999999999999987543
No 161
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.6e-42 Score=399.47 Aligned_cols=221 Identities=30% Similarity=0.480 Sum_probs=199.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|++++|++ +.+++|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++.++
T Consensus 2 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA----RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLG 77 (236)
T ss_pred EEEEeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEE
Confidence 789999999953 4699999999999999999999999999999999999999999999999987543233446899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.+....++.+..+.++++.++++.+||.+..++.+.+||||||||++|||||+.+|+++|||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 157 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLD 157 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999988889999999988776666665566778899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
|||+|||+.+++.+++.|++++ +|+|||++||+++++.. |||+++|++|++++.|++.++.+.++
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~~~~ 224 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRGALG 224 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHHHcC
Confidence 9999999999999999999985 48999999999999985 99999999999999999988876543
No 162
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-42 Score=409.14 Aligned_cols=225 Identities=26% Similarity=0.445 Sum_probs=199.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----Ch
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DP 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-----~~ 1538 (1833)
+|+++|+++.|+++.. ..+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.. ..
T Consensus 1 mi~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 79 (288)
T PRK13643 1 MIKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEI 79 (288)
T ss_pred CEEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccH
Confidence 4789999999964211 12359999999999999999999999999999999999999999999999999852 23
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000224 1539 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
...++++||++|++ .+++ .|+.||+.+.....+.+..+.++++.++++.++|. +..++++.+||||||||++||+|
T Consensus 80 ~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~a 158 (288)
T PRK13643 80 KPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGI 158 (288)
T ss_pred HHHHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHH
Confidence 45678899999986 5665 69999999876666776666777889999999996 57899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+.+|++|||||||+|||+.+++.+++.|+++++ +| .|||++|||++++..+||||++|++|++++.|+++++..
T Consensus 159 L~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 159 LAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SG-QTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999864 44 689999999999999999999999999999999998864
No 163
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-42 Score=408.04 Aligned_cols=220 Identities=31% Similarity=0.433 Sum_probs=195.4
Q ss_pred EEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH----
Q 000224 1466 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA---- 1540 (1833)
Q Consensus 1466 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~---- 1540 (1833)
.++|++|.|+ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 26 ~~~~~~~~~~------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 99 (269)
T cd03294 26 SKEEILKKTG------QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELREL 99 (269)
T ss_pred hhhhhhhhcC------CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhh
Confidence 4668888885 35689999999999999999999999999999999999999999999999988542 211
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
.++++||+||++.+++.+|++||+.+.....+.......+++.++++.++|.+..++++.+|||||||||+||+||+.+|
T Consensus 100 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p 179 (269)
T cd03294 100 RRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDP 179 (269)
T ss_pred hcCcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 24579999999999988999999988765555554445567888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 180 ~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 180 DILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999864434 589999999999999999999999999999999988765
No 164
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=410.07 Aligned_cols=222 Identities=26% Similarity=0.410 Sum_probs=199.5
Q ss_pred eEEEEeeEEEecCCC-CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHH
Q 000224 559 CIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 632 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~-~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 632 (1833)
.++++||+|.|+++. ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999996421 12469999999999999999999999999999999999999999999999998843 234
Q ss_pred HhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000224 633 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 633 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
..|+.||||||++ .+++ .||.||+.+.....+.+.++.++++.++++.+||. +..++.+.+||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 6788999999986 4665 59999999877666777777888899999999997 678899999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999984 4899999999999999999999999999999999987764
No 165
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.2e-42 Score=400.13 Aligned_cols=220 Identities=34% Similarity=0.534 Sum_probs=194.5
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1542 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~-~~ 1542 (1833)
++++|+++.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (236)
T cd03219 1 LEVRGLTKRFGG------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIAR 74 (236)
T ss_pred CeeeeeEEEECC------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHh
Confidence 468999999952 4599999999999999999999999999999999999999999999999988653 222 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCC----------ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHH
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGV----------AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~----------~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~l 1612 (1833)
+.+||+||++.+++.+|++||+.+.....+. ...+..+.+.++++.+++.+..++++++||||||||++|
T Consensus 75 ~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~l 154 (236)
T cd03219 75 LGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEI 154 (236)
T ss_pred cCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHH
Confidence 6799999999999999999999876544322 123345567889999999988899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999999864 44 589999999999999999999999999999999988754
No 166
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.3e-42 Score=398.99 Aligned_cols=219 Identities=34% Similarity=0.558 Sum_probs=195.4
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1542 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~-~~ 1542 (1833)
++++|++|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 74 (232)
T cd03218 1 LRAENLSKRYGK------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRAR 74 (232)
T ss_pred CeEEEEEEEeCC------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHh
Confidence 468999999953 4599999999999999999999999999999999999999999999999987542 222 34
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
+.+||+||++.+++.+|++||+.+....++....+..+.++++++.+++.+..++++.+||||||||++||+||+.+|++
T Consensus 75 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 154 (232)
T cd03218 75 LGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKF 154 (232)
T ss_pred ccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 67999999999999999999998866555554444556778899999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 155 lllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 155 LLLDEPFAGVDPIAVQDIQKIIKILKD-RG-IGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 999999999999999999999999864 44 58999999999999999999999999999999988764
No 167
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=400.35 Aligned_cols=222 Identities=35% Similarity=0.577 Sum_probs=198.0
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
++++|++++|++ .+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (242)
T cd03295 1 IEFENVTKRYGG-----GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRR 75 (242)
T ss_pred CEEEEEEEEeCC-----cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhc
Confidence 468999999963 1459999999999999999999999999999999999999999999999998864 3445577
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc--ccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK--HAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~--~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
.+||+||++.+++.+|++||+.+.....+.......+.+.++++.+++.+ ..++++.+|||||||||+||+||+.+|+
T Consensus 76 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 155 (242)
T cd03295 76 KIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPP 155 (242)
T ss_pred ceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 89999999999988999999988766655554445567889999999985 7899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+||||++|++|++++.|+++++.+
T Consensus 156 llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 156 LLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999864334 689999999999999999999999999999999888754
No 168
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-42 Score=400.88 Aligned_cols=222 Identities=30% Similarity=0.482 Sum_probs=193.9
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC----hHH
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----PKA 1540 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~----~~~ 1540 (1833)
++++||++.|++ ++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (241)
T cd03256 1 IEVENLSKTYPN-----GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQ 75 (241)
T ss_pred CEEeeEEEecCC-----ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHH
Confidence 468999999963 14599999999999999999999999999999999999999999999999988642 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH--------HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR--------IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~l 1612 (1833)
.++.+||+||++.+++.+|++||+.+... +.+.......+++.++++.+++.+..++++.+|||||||||+|
T Consensus 76 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~l 155 (241)
T cd03256 76 LRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAI 155 (241)
T ss_pred HHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHH
Confidence 56789999999999988999999976421 1122223344567889999999888899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 156 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (241)
T cd03256 156 ARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELTD 234 (241)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhhH
Confidence 9999999999999999999999999999999999864444 589999999999999999999999999999999888643
No 169
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=410.23 Aligned_cols=225 Identities=24% Similarity=0.394 Sum_probs=198.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-------
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~------- 1536 (1833)
+|+++|++++|+++.. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 4889999999964211 12369999999999999999999999999999999999999999999999876521
Q ss_pred ------------------ChHHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-ccc
Q 000224 1537 ------------------DPKAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHA 1595 (1833)
Q Consensus 1537 ------------------~~~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~ 1595 (1833)
.....+++|||+||++ .++ ..||+||+.+.....+.+.++..+++.++++.+||. +..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~ 159 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLF-EQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYL 159 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccc-cccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhh
Confidence 2245678899999985 444 479999999876666777777778889999999996 678
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEE
Q 000224 1596 KKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGI 1675 (1833)
Q Consensus 1596 ~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~i 1675 (1833)
++++.+||||||||++||+||+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++
T Consensus 160 ~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~-~~g-~tiiivtHd~~~~~~~adrv~v 237 (305)
T PRK13651 160 QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLN-KQG-KTIILVTHDLDNVLEWTKRTIF 237 (305)
T ss_pred hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeeCHHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999986 444 6899999999999999999999
Q ss_pred EECCEEEEecChhHHHh
Q 000224 1676 MVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1676 m~~G~i~~~g~~~~l~~ 1692 (1833)
|++|++++.|+++++.+
T Consensus 238 l~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 238 FKDGKIIKDGDTYDILS 254 (305)
T ss_pred EECCEEEEECCHHHHhc
Confidence 99999999999998764
No 170
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-42 Score=400.87 Aligned_cols=219 Identities=32% Similarity=0.519 Sum_probs=198.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++||+++|++. +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 1 l~~~~l~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (242)
T cd03295 1 IEFENVTKRYGGG---KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKI 77 (242)
T ss_pred CEEEEEEEEeCCc---ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcce
Confidence 4689999999631 459999999999999999999999999999999999999999999999998753 344567789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc--ccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD--KVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~--~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
||+||++.+++.+|++||+.++....+.+.++.++++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 157 (242)
T cd03295 78 GYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLL 157 (242)
T ss_pred EEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999998766666655566778999999999986 779999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||||+|||+.+++.+++.|++++ + |+|||++||+++++..+||||++|++|++++.|++..+.
T Consensus 158 llDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 158 LMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999985 3 899999999999999999999999999999999887764
No 171
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-42 Score=408.11 Aligned_cols=226 Identities=26% Similarity=0.434 Sum_probs=198.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-----~ 1538 (1833)
.++++||+|.|+++.. ..+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 3789999999963210 124699999999999999999999999999999999999999999999999998531 2
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000224 1539 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
...+++||||||++ .+++ .|+.||+.+.....+.+..+..+++.++++.+||. +..++++.+||||||||++||+|
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lara 159 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSI 159 (286)
T ss_pred HHHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 45678899999986 4555 59999998876555666666777888999999996 67889999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+.+|++|||||||+|||+.+++.++++|++++++.| +|||++||+++++..+||||++|++|++++.|+++++.+
T Consensus 160 L~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 160 LAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDEN-KTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999864444 699999999999999999999999999999999988764
No 172
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-42 Score=392.93 Aligned_cols=209 Identities=33% Similarity=0.596 Sum_probs=191.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ..++.+|
T Consensus 1 l~~~~l~~~~~~----~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~---~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR----VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI---AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH---HHHccEE
Confidence 468999999952 469999999999999999999999999999999999999999999999988753 3567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.+.....+.+..+.++++.++++.+|+.+..++++.+||||||||++||+||+.+|+++|||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllD 153 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILD 153 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999998776666666667788999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++.+.|
T Consensus 154 EP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 154 EPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999985 5899999999999999999999999999997654
No 173
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-42 Score=406.95 Aligned_cols=225 Identities=28% Similarity=0.414 Sum_probs=200.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+++++|+++.|++. +.+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 4 ~l~~~~l~~~~~~~---~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKED---QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCC---CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 68999999999632 12459999999999999999999999999999999999999999999999999864 344567
Q ss_pred cceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+++||+||++ .+++.+|++||+.+.....+.+.++..+++.++++.++|.+..++++.+||||||||++||+||+.+|+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~ 160 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPK 160 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7899999997 366778999999876655666666667788999999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+++.+++.|++++++.| +|||++||++++++ .||||++|++|+++..|+++++..+
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 161 IIILDEATSMLDPEGRLELIKTIKGIRDDYQ-MTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999965434 68999999999995 7999999999999999999887643
No 174
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.4e-42 Score=400.75 Aligned_cols=218 Identities=30% Similarity=0.476 Sum_probs=197.7
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC-----cceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~---~ 630 (1833)
+++++||++.|++ ..+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 1 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~ 76 (247)
T TIGR00972 1 AIEIENLNLFYGE----KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKID 76 (247)
T ss_pred CEEEEEEEEEECC----eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccc
Confidence 3789999999953 35999999999999999999999999999999999999998 9999999998853 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....++.+||+||++.+++ +|++||+.+.....+ .+.++.++++.++++.+||. +..++++++||||||||++|
T Consensus 77 ~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 77 VVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred hHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 3456788999999999998 999999998766555 34455667889999999998 67889999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999876799999999999999999999999999999999987764
No 175
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-42 Score=397.12 Aligned_cols=218 Identities=28% Similarity=0.462 Sum_probs=193.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHH---H
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD---E 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~---~ 633 (1833)
+.++++||++.|+.+...+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. +.. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 469999999999643212469999999999999999999999999999999999999999999999998853 211 2
Q ss_pred h-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 634 I-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 634 ~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
. ++.+||+||++.+++.+|++||+.+.....+...++.++++.++++.+||.+..++.+.+||||||||++|||||+.+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~ 163 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNN 163 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 3 367999999999999999999999876555555566677899999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
|++|||||||+|||+.+++.++++|++++ +|+|||++||++++++. +||+++|++|++++.|+
T Consensus 164 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~-~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 164 PRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKR-MSRQLEMRDGRLTAELS 228 (233)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh-hCEEEEEECCEEEEEec
Confidence 99999999999999999999999999984 48999999999999987 57999999999998775
No 176
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.2e-42 Score=398.98 Aligned_cols=215 Identities=34% Similarity=0.496 Sum_probs=191.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCC-----CCCcceEEEcCccCCc-c--H
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI-----PPTTGDALVFGKNITA-D--M 631 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~-----~p~~G~i~i~g~~i~~-~--~ 631 (1833)
|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|++ +|++|+|.++|.++.. + .
T Consensus 1 i~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 76 (227)
T cd03260 1 IELRDLNVYYGD----KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDV 76 (227)
T ss_pred CEEEEEEEEcCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHH
Confidence 468999999953 36999999999999999999999999999999999999 9999999999998753 2 3
Q ss_pred HHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHcCCCcccccc--cCCCChhHHHHHHHHHH
Q 000224 632 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKE-ELLESVVAEMVDEVGLADKVNIV--VRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~-~~~~~~v~~~l~~~~L~~~~~~~--~~~LSgGqkqrl~lA~a 708 (1833)
...++++||+||++.++ .+||+||+.+.....+... ++.++++.++++.+|+.+..+++ +.+||||||||++||||
T Consensus 77 ~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~a 155 (227)
T cd03260 77 LELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARA 155 (227)
T ss_pred HHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHH
Confidence 45678899999999888 7899999988766555433 33567889999999998877776 59999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHH
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF 779 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~ 779 (1833)
|+.+|++|||||||+|||+.+++.++++|+++++.+|||++||+++++..+|||+++|++|++++.|++.+
T Consensus 156 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 156 LANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999998645999999999999999999999999999999887643
No 177
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=406.85 Aligned_cols=219 Identities=28% Similarity=0.419 Sum_probs=198.1
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||+|.|++ .+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...+.++.
T Consensus 4 ~l~~~~l~~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (274)
T PRK13647 4 IIEVEDLHFRYKD---GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSK 80 (274)
T ss_pred eEEEEEEEEEeCC---CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhh
Confidence 5899999999953 2359999999999999999999999999999999999999999999999998853 34556778
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++. .+...||.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++|||||+.+|++|
T Consensus 81 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 160 (274)
T PRK13647 81 VGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVI 160 (274)
T ss_pred EEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999973 3446799999998766666766667788999999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|+++.+
T Consensus 161 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 161 VLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999985 589999999999999999999999999999999998654
No 178
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-42 Score=377.23 Aligned_cols=220 Identities=31% Similarity=0.500 Sum_probs=197.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r 635 (1833)
..++++||+-.| +...||+||||++++|||++|+|+||||||||++.|+|+.+|.+|+|.++|.|++. .-+..|
T Consensus 2 ~mL~v~~l~~~Y----G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 2 PMLEVENLSAGY----GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred CceeEEeEeecc----cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 358999999999 45689999999999999999999999999999999999999999999999999974 345678
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-CCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-LADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~-L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
..|+||||...+|+.|||+|||..++....- +...+..++++.+.+- |.+.++++.++|||||||.|+|||||+.+|+
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999987654322 1112222677777774 6788899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|+|||||.||-|.-.+++.+.|+++++ |.||+++.++...|..++||.++|++|+++..|++++|.+
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 9999999999999999999999999973 7899999999999999999999999999999999988864
No 179
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-42 Score=395.60 Aligned_cols=220 Identities=26% Similarity=0.448 Sum_probs=192.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh-H--
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP-K-- 1539 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~-~-- 1539 (1833)
++++++|++|.|+++. ..+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.... .
T Consensus 4 ~~l~~~~l~~~~~~~~--~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~ 81 (233)
T PRK11629 4 ILLQCDNLCKRYQEGS--VQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAK 81 (233)
T ss_pred ceEEEEeEEEEcCCCC--cceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHH
Confidence 5799999999996421 1146999999999999999999999999999999999999999999999999986532 1
Q ss_pred -Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1540 -AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1540 -~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
.. ++.+||+||++.+++.+|++||+.+.....+....+.++++.++++.+||.+..++++.+||||||||++||+||+
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~ 161 (233)
T PRK11629 82 AELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALV 161 (233)
T ss_pred HHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 12 3679999999989999999999988655555554455667889999999998889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
.+|++|||||||+|||+.+++.+++.|+++++++| +|||++||++++++.+ ||+++|++|++++.++
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~~-~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 162 NNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKRM-SRQLEMRDGRLTAELS 228 (233)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHhh-CEEEEEECCEEEEEec
Confidence 99999999999999999999999999999864444 6899999999999875 6999999999998775
No 180
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-42 Score=375.62 Aligned_cols=223 Identities=30% Similarity=0.429 Sum_probs=198.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh--HH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP--KA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~--~~ 1540 (1833)
++++++||+..|+ ...||++|||++++|||++|+|+||||||||+|.|+|+.+|.+|+|.++|+|+...+ ..
T Consensus 2 ~mL~v~~l~~~YG------~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r 75 (237)
T COG0410 2 PMLEVENLSAGYG------KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHER 75 (237)
T ss_pred CceeEEeEeeccc------ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHH
Confidence 4799999999996 467999999999999999999999999999999999999999999999999998743 45
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcC-CccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFD-LLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~-L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.|..|+||||...+|+.|||+|||.+.+....- +...+...++..+.|- |.+..+++.++|||||||-|+|||||+.+
T Consensus 76 ~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 76 ARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred HhCCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 788899999999999999999999987654322 1112222566777765 67889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|++|+|||||.||-|.-.+++.+.|++++++.| .||+++-++...+.+++||.++|++|+++..|+.++|.+.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999975544 7999999999999999999999999999999999998754
No 181
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-42 Score=407.95 Aligned_cols=222 Identities=27% Similarity=0.459 Sum_probs=198.2
Q ss_pred eEEEEeeEEEecCCCC-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHH
Q 000224 559 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 632 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 632 (1833)
.|+++||+|.|++... .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 4789999999963211 2469999999999999999999999999999999999999999999999998743 234
Q ss_pred HhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000224 633 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 633 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
..++.+||+||++ .++ .+||.||+.+.....+...++.+++++++++.+||. +..++++++||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 5677899999997 355 579999998876655666667778899999999997 678999999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIF 233 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999985 5899999999999999999999999999999999987764
No 182
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=404.88 Aligned_cols=224 Identities=25% Similarity=0.419 Sum_probs=198.8
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
.+++++|++|+|++ .+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.. .....
T Consensus 2 ~~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (277)
T PRK13652 2 HLIETRDLCYSYSG-----SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREV 76 (277)
T ss_pred ceEEEEEEEEEeCC-----CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 36899999999953 2359999999999999999999999999999999999999999999999998864 34456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++++||+||++. .+...|+.||+.+.....+.......+.+.++++.++|.+..++++.+||||||||++||+||+.+|
T Consensus 77 ~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p 156 (277)
T PRK13652 77 RKFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEP 156 (277)
T ss_pred HhheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 778999999963 2335799999987655455655556667889999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++.++|||+++|++|++++.|+++++.+
T Consensus 157 ~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 157 QVLVLDEPTAGLDPQGVKELIDFLNDLPETYG-MTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999865434 689999999999999999999999999999999998864
No 183
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-42 Score=406.32 Aligned_cols=224 Identities=24% Similarity=0.390 Sum_probs=199.1
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPK 1539 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~---~~~ 1539 (1833)
++|+++|++++|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...
T Consensus 4 ~~l~~~~l~~~~~~-----~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~ 78 (283)
T PRK13636 4 YILKVEELNYNYSD-----GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLM 78 (283)
T ss_pred ceEEEEeEEEEeCC-----CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHH
Confidence 47999999999952 2459999999999999999999999999999999999999999999999999842 234
Q ss_pred HhccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1540 AARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
..++.+||+||++. .+...|++||+.+.....+.+..+..+++.++++.++|.+..++++.+||||||||++||+||+.
T Consensus 79 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 79 KLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred HHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 56788999999863 23357999999876555566666566778899999999989999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+|++|||||||+|||+.+++.++++|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999965434 689999999999999999999999999999999988764
No 184
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-42 Score=411.99 Aligned_cols=223 Identities=26% Similarity=0.431 Sum_probs=199.7
Q ss_pred ceEEEEeeEEEecCCC-CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-------
Q 000224 558 RCIQIRKLHKVYATKR-GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA------- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~-~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~------- 629 (1833)
..|+++||++.|++.. ..+.+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++..
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999996421 12469999999999999999999999999999999999999999999999988743
Q ss_pred ----------cHHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 000224 630 ----------DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALS 696 (1833)
Q Consensus 630 ----------~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LS 696 (1833)
.....|+.+|||+|++ .+++ .||+||+.++....+.+.++..+++.++++.+||. +..++.+.+||
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LS 178 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLS 178 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCC
Confidence 2345678999999997 4675 49999998876555667777778899999999997 57899999999
Q ss_pred hhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 697 GGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 697 gGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
||||||++|||||+.+|++|||||||+|||+.++++++++|++++ +|+|||++||+++++..+||||++|++|++++.|
T Consensus 179 gGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g 258 (320)
T PRK13631 179 GGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTG 258 (320)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999885 5899999999999999999999999999999999
Q ss_pred CHHHHH
Q 000224 776 SSLFLK 781 (1833)
Q Consensus 776 ~~~~Lk 781 (1833)
++.++.
T Consensus 259 ~~~~~~ 264 (320)
T PRK13631 259 TPYEIF 264 (320)
T ss_pred CHHHHh
Confidence 998764
No 185
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-42 Score=405.64 Aligned_cols=224 Identities=28% Similarity=0.428 Sum_probs=199.8
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~~ 1541 (1833)
++++++||++.|++. .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ....
T Consensus 4 ~~l~~~~l~~~~~~~----~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~ 79 (279)
T PRK13635 4 EIIRVEHISFRYPDA----ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDV 79 (279)
T ss_pred ceEEEEEEEEEeCCC----CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHH
Confidence 479999999999631 24599999999999999999999999999999999999999999999999998653 3456
Q ss_pred ccceEEEecCC-CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFD-ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~-~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++.|||+||++ .++..+|+.||+.+.....+.+.++..+++.++++.+||.+..++++.+||||||||++||+||+.+|
T Consensus 80 ~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 80 RRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred hhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 77899999997 36667899999988766656665556677889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++. |||+++|++|++++.|+++++..
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~-~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKG-ITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCC-CEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999965434 689999999999975 99999999999999999988764
No 186
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.4e-39 Score=422.22 Aligned_cols=217 Identities=28% Similarity=0.420 Sum_probs=192.9
Q ss_pred EEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC--cceEEEcCccCCccHHHhhcce
Q 000224 561 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT--TGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 561 ~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~--~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.++|++|+|+ ++.+|+|+|+++++||++||+||||||||||+++|+|..+|+ +|+|.++|+++.. ..++++
T Consensus 70 ~~~~l~~~~~----~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~~---~~~~~i 142 (659)
T PLN03211 70 KISDETRQIQ----ERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPTK---QILKRT 142 (659)
T ss_pred ccccccccCC----CCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECch---hhccce
Confidence 4667778884 346999999999999999999999999999999999999986 9999999998742 345679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCcccc-----cccCCCChhHHHHHHHHHHHh
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLK---GVKEELLESVVAEMVDEVGLADKVN-----IVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~---~~~~~~~~~~v~~~l~~~~L~~~~~-----~~~~~LSgGqkqrl~lA~al~ 710 (1833)
|||+|++.+++.+||+||+.+.+.++ ..+.++.+++++++++.+||.+..| +.+++||||||||++||+||+
T Consensus 143 ~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~ 222 (659)
T PLN03211 143 GFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEML 222 (659)
T ss_pred EEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHH
Confidence 99999999999999999999877654 2345556678999999999987664 456789999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHH-HHHhhcCEEEEeeCCEEEeecCHHHHHhhh
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMD-EAEELGDRIAIMANGSLKCCGSSLFLKHQY 784 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~-e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~ 784 (1833)
.+|+||+|||||+|||+.+++++.++|++++ +|+|||++||+++ ++..++|+|++|++|++++.|+++++...+
T Consensus 223 ~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f 298 (659)
T PLN03211 223 INPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYF 298 (659)
T ss_pred hCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHH
Confidence 9999999999999999999999999999986 5999999999998 688999999999999999999999887655
No 187
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-42 Score=407.61 Aligned_cols=218 Identities=32% Similarity=0.458 Sum_probs=196.5
Q ss_pred EEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHH----hh
Q 000224 561 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDE----IR 635 (1833)
Q Consensus 561 ~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~----~r 635 (1833)
.++|++|.|+ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +... .+
T Consensus 26 ~~~~~~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 101 (269)
T cd03294 26 SKEEILKKTG----QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRR 101 (269)
T ss_pred hhhhhhhhcC----CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhc
Confidence 5678899984 3569999999999999999999999999999999999999999999999998753 1111 24
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+++||+||++.+++.+||.||+.+.....+......++++.++++.+||.+..++++++||||||||++|||||+.+|++
T Consensus 102 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~i 181 (269)
T cd03294 102 KKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDI 181 (269)
T ss_pred CcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 67999999999999999999999876666665556667889999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 182 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 182 LLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999984 3 8999999999999999999999999999999999888754
No 188
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.2e-42 Score=397.61 Aligned_cols=221 Identities=24% Similarity=0.405 Sum_probs=196.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC---hHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD---PKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~---~~~ 1540 (1833)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|+++|.++... ...
T Consensus 1 ~l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 74 (240)
T PRK09493 1 MIEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERL 74 (240)
T ss_pred CEEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHH
Confidence 4789999999952 4599999999999999999999999999999999999999999999999988642 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++++||+||++.+++.+|++||+.+... ..+....+..+.+.++++.+|+.+..++++.+||||||||++||+||+.+
T Consensus 75 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 75 IRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred HhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 57789999999989888999999987542 23444444556788899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|+|||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLA-EEG-MTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999999986 344 589999999999999999999999999999999887654
No 189
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.3e-42 Score=395.16 Aligned_cols=213 Identities=31% Similarity=0.480 Sum_probs=186.7
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh-H----
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP-K---- 1539 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~-~---- 1539 (1833)
|+++|++++|++++ ..+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... .
T Consensus 1 l~~~~l~~~~~~~~--~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 78 (218)
T cd03255 1 IELKNLSKTYGGGG--EKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAA 78 (218)
T ss_pred CeEeeeEEEecCCC--cceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHH
Confidence 46899999996421 0146999999999999999999999999999999999999999999999999886422 1
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..++++||+||++.+++.+|++||+.+....++......++.+.++++.+||.+..++++++|||||||||+||+||+.+
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 158 (218)
T cd03255 79 FRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALAND 158 (218)
T ss_pred HHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccC
Confidence 13567999999999999999999999876666654444556788899999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
|++|||||||+|||+.+++.+++.|+++++++| +|||++||++++++ +|||+++|++|++
T Consensus 159 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 159 PKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 999999999999999999999999999864334 68999999999998 9999999999974
No 190
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-42 Score=400.22 Aligned_cols=219 Identities=30% Similarity=0.483 Sum_probs=193.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc----HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 635 (1833)
++++||++.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (241)
T cd03256 1 IEVENLSKTYPN---GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLR 77 (241)
T ss_pred CEEeeEEEecCC---ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHH
Confidence 468999999953 14699999999999999999999999999999999999999999999999987532 34567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAV--------LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--------~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~ 707 (1833)
+.+||+||++.+++.+||+||+.+... +.+...+..++++.++++.+||.+..++++.+|||||||||+|||
T Consensus 78 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 78 RQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred hccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHH
Confidence 789999999999999999999976432 112222344567889999999998889999999999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||+.+|++|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999999985 3899999999999999999999999999999999887663
No 191
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.4e-42 Score=397.98 Aligned_cols=218 Identities=26% Similarity=0.459 Sum_probs=197.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc---cHHHhhc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 636 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 636 (1833)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 2 l~~~~l~~~~~~----~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (240)
T PRK09493 2 IEFKNVSKHFGP----TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQ 77 (240)
T ss_pred EEEEeEEEEECC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhh
Confidence 789999999953 469999999999999999999999999999999999999999999999998753 2345677
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+||+||++.+++.+||+||+.+... ..+...++.++++.++++.+||++..++++++||||||||++|||||+.+|++
T Consensus 78 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 157 (240)
T PRK09493 78 EAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKL 157 (240)
T ss_pred ceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 89999999999999999999987542 33555566677889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999986 5899999999999999999999999999999999877654
No 192
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.3e-42 Score=403.17 Aligned_cols=223 Identities=25% Similarity=0.382 Sum_probs=197.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P--- 1538 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~--- 1538 (1833)
.+|+++|++|.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 47999999999952 4699999999999999999999999999999999999999999999999987542 1
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1539 KAARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
...++++||+||++.+++.+|+.||+.+..... +.+....++.+.++++.+++.+..++++.+||||||||++||+||+
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 234677999999999999899999998754332 2333334556778899999998899999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
.+|++|||||||+|||+.+++.+++.|+++++++| +|||++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALG-VTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999864434 689999999999999999999999999999999988754
No 193
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-42 Score=406.48 Aligned_cols=221 Identities=29% Similarity=0.434 Sum_probs=200.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||++.|++. +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....|++
T Consensus 4 ~l~~~~l~~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 4 IIEVKNLTFKYKED-QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred eEEEEeEEEEcCCC-CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 58999999999642 12459999999999999999999999999999999999999999999999998854 34456788
Q ss_pred eEEEccCC-CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYD-ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~-~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++ .+++.+||+||+.+.....+.+.++.++++.++++.+||.+..++.+.+||||||||++|||||+.+|++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lL 162 (279)
T PRK13650 83 IGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKII 162 (279)
T ss_pred ceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999997 36777899999998766667777777888999999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||||+|||+.+++.++++|++++ + |+|||++||+++++. .||||++|++|+++..|++.++.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 163 ILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999985 3 899999999999995 79999999999999999987664
No 194
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=405.86 Aligned_cols=225 Identities=27% Similarity=0.444 Sum_probs=196.9
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-----~ 1538 (1833)
+|+++|++|.|++... ..+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... .
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999963210 124699999999999999999999999999999999999999999999999988531 2
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000224 1539 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
...++.|||+||++ .++ .+|++||+.+.....+...++..+++.++++.++|. +..++++++|||||||||+||+|
T Consensus 81 ~~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~lara 159 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGV 159 (287)
T ss_pred HHHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHH
Confidence 44567899999996 355 589999998765555555555666788999999997 67899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++||++++++.+|||+++|++|++++.|+++++.+
T Consensus 160 l~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~-~~g-~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 160 MAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQ-KAG-HTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999985 344 689999999999999999999999999999999998764
No 195
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.1e-39 Score=426.22 Aligned_cols=210 Identities=31% Similarity=0.439 Sum_probs=191.3
Q ss_pred CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC---cceEEEcCccCCccHHHhhcceEEEccCCCCCCC
Q 000224 574 GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITADMDEIRKGLGVCPQYDILFPE 650 (1833)
Q Consensus 574 ~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~ 650 (1833)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+|. +|+|.++|.++.. ...|+.+|||+|++.+++.
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~--~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDA--KEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCH--HHHhhhceeeccccccCcc
Confidence 4567999999999999999999999999999999999999885 8999999998752 3567889999999999999
Q ss_pred CCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCCcccccccC------CCChhHHHHHHHHHHHhCCCcEEEEeCC
Q 000224 651 LTVREHLEMFAVLKG---VKEELLESVVAEMVDEVGLADKVNIVVR------ALSGGMKRKLSLGIALIGDSKVVILDEP 721 (1833)
Q Consensus 651 lTv~e~l~~~~~~~~---~~~~~~~~~v~~~l~~~~L~~~~~~~~~------~LSgGqkqrl~lA~al~~~p~vliLDEP 721 (1833)
+||+|||.|.+.++. .++++.+++++++++.+||.+..|++++ .|||||||||+||+||+.+|++++||||
T Consensus 114 lTV~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEP 193 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEP 193 (617)
T ss_pred CcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCC
Confidence 999999999887752 3456677889999999999998888876 4999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHH-HHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 722 TSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMD-EAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 722 tsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~-e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
|+|||+.++..+++.|++++ +|+|||+++|++. ++..++||+++|++|+++..|++.++++.+.
T Consensus 194 tsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~~~~f~ 259 (617)
T TIGR00955 194 TSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQAVPFFS 259 (617)
T ss_pred CcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHHHHHHH
Confidence 99999999999999999986 4899999999995 8888999999999999999999998876553
No 196
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.7e-42 Score=390.96 Aligned_cols=207 Identities=33% Similarity=0.617 Sum_probs=188.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 l~~~~l~~~~~~----~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK----KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN-IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC----eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch-HHHHhhEE
Confidence 468999999943 4699999999999999999999999999999999999999999999999987543 45567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+||+||+.++....+.. +++++++++.+++.+..++++++|||||||||+|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 151 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILD 151 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999999999999999998876554432 456888999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 152 EPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999986 5899999999999999999999999999998654
No 197
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.7e-42 Score=395.59 Aligned_cols=215 Identities=27% Similarity=0.486 Sum_probs=190.0
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC-----CCCceEEEEcCeeCCCC--
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE-----YPTDGTAFIFGKDIRSD-- 1537 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~-----~p~~G~i~i~G~~i~~~-- 1537 (1833)
|+++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|+++...
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 468999999953 46999999999999999999999999999999999999 99999999999987542
Q ss_pred -hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh-hHHHHHHHHHHHcCCccccCCC--CCCCChhHHHHHHHH
Q 000224 1538 -PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY-RMDDVVMEKLVEFDLLKHAKKP--SFTLSGGNKRKLSVA 1613 (1833)
Q Consensus 1538 -~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~~~~~l~~~~L~~~~~~~--~~~LSgG~kqrl~lA 1613 (1833)
....++++||+||++.++ .+|++||+.+.....+.... +.++++.++++.+++.+..+++ +.+||||||||++||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 344577899999998888 79999999886655554332 2456778899999998776766 599999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1614 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1614 ~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
+||+.+|++|||||||+|||+.+++.+++.|+++++ + +|||++|||++++.++|||+++|++|++++.|++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~--~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKK-E--YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh-C--cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999999999999853 3 589999999999999999999999999999998765
No 198
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5e-42 Score=392.49 Aligned_cols=208 Identities=26% Similarity=0.513 Sum_probs=189.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc----HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 635 (1833)
++++|+++.|++ ++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 2 l~~~~l~~~~~~---~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (214)
T TIGR02673 2 IEFHNVSKAYPG---GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLR 78 (214)
T ss_pred EEEEeeeEEeCC---CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 789999999942 23699999999999999999999999999999999999999999999999988531 23456
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+|+.||+.+.....+...+..++++.++++.+||.+..++.+.+||||||||++|||||+.+|++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~l 158 (214)
T TIGR02673 79 RRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPPL 158 (214)
T ss_pred hheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCE
Confidence 78999999999999999999999876666665566677899999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCE
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGS 770 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~ 770 (1833)
+||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+
T Consensus 159 llLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 159 LLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999985 58999999999999999999999999985
No 199
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=410.74 Aligned_cols=227 Identities=24% Similarity=0.350 Sum_probs=202.7
Q ss_pred ceEEEEeeEEEecCCCC------cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--
Q 000224 558 RCIQIRKLHKVYATKRG------NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~------~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-- 629 (1833)
..|+++||+|.|+.+.+ .+.||+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 46999999999974322 3579999999999999999999999999999999999999999999999998853
Q ss_pred --cHHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHH
Q 000224 630 --DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 630 --~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~-~~~~~~~~LSgGqkqrl 703 (1833)
.....|++|||+||++ .+++.+|+.+++....... +..+++.++++.++++.+||.+ ..++++++||||||||+
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 2335677899999998 5889999999998765543 4566677788999999999974 67999999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++||+||||+|||+.++++++++|++++ .|.|||++|||++++..+||||++|.+|++++.|+..++.
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999985 3899999999999999999999999999999999998886
Q ss_pred hhh
Q 000224 782 HQY 784 (1833)
Q Consensus 782 ~~~ 784 (1833)
+..
T Consensus 244 ~~p 246 (327)
T PRK11308 244 NNP 246 (327)
T ss_pred cCC
Confidence 543
No 200
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-42 Score=389.65 Aligned_cols=211 Identities=36% Similarity=0.599 Sum_probs=190.6
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|++|.|++ +.+++|+||++++| ++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 1 i~~~~~~~~~~~------~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK------KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC------EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 468999999953 45999999999999 99999999999999999999999999999999999886544556788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
++|+||++.+++.+|++||+.+.....+.+..+.++.+.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 153 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILI 153 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999989999999987666665545556678889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|++++ + + .|||++||++++++.+|||+++|++|++++.|
T Consensus 154 lDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 154 VDEPTAGLDPEERIRFRNLLSELG-E-D-RIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHh-C-C-CEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999985 3 3 58999999999999999999999999998764
No 201
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=403.81 Aligned_cols=228 Identities=26% Similarity=0.419 Sum_probs=200.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~--~~~ 1540 (1833)
.+++++|++|+|++....+.+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 479999999999742211135699999999999999999999999999999999999999999999999988642 345
Q ss_pred hccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1541 ARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
.++++||+||++. ++ ..|+.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++||+||+.
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~ 161 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAM 161 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 6788999999974 44 46999999887665566666666778899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|++|||||||+|||+.+++.+++.|++++++.| .|||++||++++++. |||+++|++|++++.|+++++...
T Consensus 162 ~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 162 RPECIIFDEPTAMLDPSGRREVVNTIKELNKKYG-ITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999864434 689999999999987 999999999999999999998754
No 202
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-41 Score=396.56 Aligned_cols=219 Identities=27% Similarity=0.417 Sum_probs=195.7
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHH-Hhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r~ 636 (1833)
.|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.. ..++
T Consensus 2 ~i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T TIGR03411 2 ILYLEGLSVSFDG----FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARA 77 (242)
T ss_pred eEEEEeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhc
Confidence 4889999999953 469999999999999999999999999999999999999999999999998753 222 2356
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLK--------GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~--------~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~a 708 (1833)
.+||+||++.+++.+||+||+.++.... +...+..+++++++++.+|+.+..++.+++||||||||++||||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 78 GIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred CeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 7999999999999999999998764321 12233456788999999999988899999999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 9999999999999999999999999999999987899999999999999999999999999999999887663
No 203
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8e-42 Score=398.60 Aligned_cols=222 Identities=28% Similarity=0.456 Sum_probs=193.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+++++|+++.|+. ++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (243)
T TIGR02315 1 MLEVENLSKVYPN-----GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLR 75 (243)
T ss_pred CeEEEeeeeecCC-----CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHH
Confidence 4789999999951 24599999999999999999999999999999999999999999999999987542 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHH--------HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHH
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYAR--------IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLS 1611 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--------~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~ 1611 (1833)
..++++||+||++.+++.+|++||+.+... +.+......++++.++++.+++.+..++++.+|||||||||+
T Consensus 76 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 76 KLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVA 155 (243)
T ss_pred HHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHH
Confidence 356789999999999988999999975321 111122334556788999999988889999999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1612 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1612 lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
||+||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++.++|||+++|++|++++.|+++++.
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDG-ITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999999999999864434 68999999999999999999999999999999988763
No 204
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=407.96 Aligned_cols=230 Identities=20% Similarity=0.355 Sum_probs=201.5
Q ss_pred ceEEEEeEEEEcCCCcc----ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh
Q 000224 1463 AIIYLRNLRKVYPGGKR----SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP 1538 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~----~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~ 1538 (1833)
++|+++||+|.|+.... .+...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++....
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 57999999999963210 01356999999999999999999999999999999999999999999999999986532
Q ss_pred ----HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHH
Q 000224 1539 ----KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1539 ----~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl 1610 (1833)
...|++|||+||++ .+.+.+|+.+++....... +....+.++++.++++.+||. +..++++++||||||||+
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 24567899999997 6888999999987655443 455555667889999999996 467999999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++||+||||+|||+.+++.++++|++++++.| +|||++|||++++..+||||++|.+|++++.|+.+++
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g-~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~ 242 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELG-LSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQI 242 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999975444 6899999999999999999999999999999999988
Q ss_pred Hhh
Q 000224 1691 KTR 1693 (1833)
Q Consensus 1691 ~~~ 1693 (1833)
.+.
T Consensus 243 ~~~ 245 (327)
T PRK11308 243 FNN 245 (327)
T ss_pred hcC
Confidence 764
No 205
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=404.07 Aligned_cols=222 Identities=25% Similarity=0.402 Sum_probs=199.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc---cHHHh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEI 634 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~ 634 (1833)
..|+++||++.|++ ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 4 ~~l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~ 80 (283)
T PRK13636 4 YILKVEELNYNYSD---GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKL 80 (283)
T ss_pred ceEEEEeEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHH
Confidence 46999999999952 2469999999999999999999999999999999999999999999999998842 23457
Q ss_pred hcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 635 RKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 635 r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
|+.+||+||++. .+...|++||+.+.....+.+.++.+++++++++.+||.+..++++.+||||||||++|||||+.+|
T Consensus 81 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p 160 (283)
T PRK13636 81 RESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEP 160 (283)
T ss_pred HhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 788999999973 2335799999988765556676667788999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 161 ~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 161 KVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999985 3 8999999999999999999999999999999999877643
No 206
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.5e-41 Score=401.46 Aligned_cols=221 Identities=27% Similarity=0.459 Sum_probs=197.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~ 633 (1833)
..|+++||++.|+ ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. . ...
T Consensus 6 ~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (269)
T PRK11831 6 NLVDMRGVSFTRG----NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYT 81 (269)
T ss_pred ceEEEeCeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHH
Confidence 4699999999995 3469999999999999999999999999999999999999999999999998753 1 223
Q ss_pred hhcceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 634 IRKGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
.++.+||+||++.+++.+|+.||+.+..... +.+....++++.++++.+||.+..++++++||||||||++|||||+.+
T Consensus 82 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 82 VRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred HhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 5678999999999999999999998764332 344455566788999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999985 3 8999999999999999999999999999999999877653
No 207
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=388.38 Aligned_cols=210 Identities=37% Similarity=0.582 Sum_probs=190.0
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|+++.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ..+++
T Consensus 1 l~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~---~~~~~ 71 (210)
T cd03269 1 LEVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI---AARNR 71 (210)
T ss_pred CEEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH---HHHcc
Confidence 468999999952 459999999999999999999999999999999999999999999999988742 35678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
++|+||++.+++.+|++||+.+....++.+..+.++.+.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 72 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ll 151 (210)
T cd03269 72 IGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLI 151 (210)
T ss_pred EEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999887766666555556778899999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|+++++ ++ +|||++||++++++.+|||+++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 152 LDEPFSGLDPVNVELLKDVIRELAR-AG-KTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998754
No 208
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2e-41 Score=396.00 Aligned_cols=219 Identities=26% Similarity=0.464 Sum_probs=195.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~G~~i~~-- 1536 (1833)
+++++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++..
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~ 74 (247)
T TIGR00972 1 AIEIENLNLFYGE------KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKK 74 (247)
T ss_pred CEEEEEEEEEECC------eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccc
Confidence 4789999999963 45999999999999999999999999999999999999998 9999999998864
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++.+||+||++.+++ +|++||+.+....++. +..+..+.+.++++.+++. +..++++.+||||||||+
T Consensus 75 ~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 153 (247)
T TIGR00972 75 IDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRL 153 (247)
T ss_pred cchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHH
Confidence 23456778999999998888 9999999886655552 3344556788899999997 678899999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|||||||+|||+.+++.++++|+++++ + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 154 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 154 CIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999853 3 5899999999999999999999999999999999887
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
.+
T Consensus 231 ~~ 232 (247)
T TIGR00972 231 FT 232 (247)
T ss_pred Hh
Confidence 54
No 209
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.2e-42 Score=390.34 Aligned_cols=209 Identities=26% Similarity=0.455 Sum_probs=190.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc----HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 635 (1833)
++++|+++.|+++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|
T Consensus 1 l~~~~l~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 77 (214)
T cd03292 1 IEFINVTKTYPNG---TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLR 77 (214)
T ss_pred CEEEEEEEEeCCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHH
Confidence 4689999999532 3699999999999999999999999999999999999999999999999987531 23467
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.++|+||++.+++.+|++||+.++....+...++.++++.++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 78 ~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 78 RKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred HheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 78999999999999999999999877666666666677899999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
+||||||+|||+.+++.+++.|++++ +|+|||++||++++++.+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999985 589999999999999999999999999974
No 210
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.5e-42 Score=392.49 Aligned_cols=216 Identities=30% Similarity=0.507 Sum_probs=192.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHH-Hhhcc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD-EIRKG 637 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~-~~r~~ 637 (1833)
|+++||+++|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +.. ..++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (222)
T cd03224 1 LEVENLNAGYGK----SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAG 76 (222)
T ss_pred CEEeeEEeecCC----eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcC
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 222 24577
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-CCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEV-GLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~-~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++.+++.+|++||+.+.....+ ..+.++++.++++.+ ++.+..++++++||||||||++|||||+.+|++|
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 154 (222)
T cd03224 77 IGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLL 154 (222)
T ss_pred eEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999999988765443 233456677888888 5888889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 155 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 155 LLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred EECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999986 5899999999999999999999999999999999877654
No 211
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.7e-42 Score=388.33 Aligned_cols=208 Identities=36% Similarity=0.552 Sum_probs=187.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|++|+|++ +.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.
T Consensus 1 l~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~ 73 (208)
T cd03268 1 LKTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN-IEALRR 73 (208)
T ss_pred CEEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch-HHHHhh
Confidence 468999999952 4699999999999999999999999999999999999999999999999987543 445678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.++...++.. ++++.++++.+++.+..++++.+|||||||||+||+||+.+|++||
T Consensus 74 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 149 (208)
T cd03268 74 IGALIEAPGFYPNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLI 149 (208)
T ss_pred EEEecCCCccCccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998998999999998876554432 3457788999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|+++++ +| .|||++||+++++..+|||+++|++|++++.|
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 150 LDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998764
No 212
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-41 Score=397.60 Aligned_cols=219 Identities=28% Similarity=0.423 Sum_probs=197.5
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc--------
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD-------- 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~-------- 630 (1833)
.++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (250)
T PRK11264 3 AIEVKNLVKKFHG----QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKG 78 (250)
T ss_pred cEEEeceEEEECC----eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhh
Confidence 4899999999953 3599999999999999999999999999999999999999999999999987421
Q ss_pred -HHHhhcceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHH
Q 000224 631 -MDEIRKGLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 631 -~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~a 708 (1833)
....++.+||+||++.+++.+|+.||+.+... .++...+..++++.++++.+||.+..++.+++||||||||++||||
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 79 LIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHH
Confidence 23457789999999999999999999987543 3445555566788999999999988899999999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999986 4899999999999999999999999999999999987764
No 213
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=402.85 Aligned_cols=222 Identities=28% Similarity=0.447 Sum_probs=200.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..++++||++.|++. .+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 4 ~~l~~~~l~~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (279)
T PRK13635 4 EIIRVEHISFRYPDA--ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRR 81 (279)
T ss_pred ceEEEEEEEEEeCCC--CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhh
Confidence 469999999999632 2469999999999999999999999999999999999999999999999999864 3345677
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.|||+||++. ++...||.||+.+.....+.+.++.++++.++++.+||.+..++++.+||||||||++|||||+.+|++
T Consensus 82 ~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 82 QVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred heEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999973 677789999999877666666666778899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||||+|||+.+++.++++|+++++ |+|||++||+++++.. ||||++|++|++++.|++.++..
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999863 8999999999999975 99999999999999999877643
No 214
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=401.22 Aligned_cols=221 Identities=26% Similarity=0.393 Sum_probs=196.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHHh
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKAA 1541 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~--~~~~ 1541 (1833)
+++++|++|+|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++... ....
T Consensus 1 ml~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 75 (274)
T PRK13644 1 MIRLENVSYSYPD-----GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGI 75 (274)
T ss_pred CEEEEEEEEEcCC-----CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHH
Confidence 4789999999952 24599999999999999999999999999999999999999999999999988642 2456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++.+||+||++. .+...|+.||+.+.....+.+..+..+.+.++++.++|.+..++++.+||||||||++||+||+.+|
T Consensus 76 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 76 RKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred HhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 778999999975 3556899999987765556666666677888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+||||||||+|||+.+++.+++.|+++++ +| +|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHE-KG-KTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999863 44 68999999999995 599999999999999999988754
No 215
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-41 Score=391.18 Aligned_cols=218 Identities=30% Similarity=0.445 Sum_probs=191.6
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-hc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA-AR 1542 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~-~~ 1542 (1833)
|+++|++|+|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ... .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK------SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC------eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 468999999953 4699999999999999999999999999999999999999999999999988642 222 35
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHc-CCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEF-DLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~-~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+++||+||++.+++.+|++||+.+.....+ ..+.++.+.++++.+ ++.+..++++.+||||||||++|||||+.+|+
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 679999999999999999999988665443 223345566778888 57777899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRD-EG-VTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999864 44 689999999999999999999999999999999887653
No 216
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=397.52 Aligned_cols=222 Identities=28% Similarity=0.457 Sum_probs=195.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 2 ~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~ 75 (258)
T PRK13548 2 MLEARNLSVRLGG------RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELA 75 (258)
T ss_pred eEEEEeEEEEeCC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhh
Confidence 5899999999963 459999999999999999999999999999999999999999999999998754 334456
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh-----
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI----- 1617 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~----- 1617 (1833)
+.+||+||++.+++.+|++||+.+.....+...++.++.+.++++.+++.+..++++.+|||||||||+||+||+
T Consensus 76 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~ 155 (258)
T PRK13548 76 RRRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEP 155 (258)
T ss_pred hheEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccc
Confidence 789999999888788999999987543333323334456788999999998889999999999999999999999
Q ss_pred -cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1618 -GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1618 -~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
.+|++|||||||+|||+.+++.+.+.|+++++++| .|||++||+++++..+||||++|++|+++..|+++++.+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 156 DGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred CCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 59999999999999999999999999999863444 589999999999999999999999999999999887653
No 217
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.3e-41 Score=389.13 Aligned_cols=210 Identities=31% Similarity=0.496 Sum_probs=187.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+++++|++|.|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (214)
T TIGR02673 1 MIEFHNVSKAYPG-----GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLP 75 (214)
T ss_pred CEEEEeeeEEeCC-----CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHH
Confidence 4789999999942 24599999999999999999999999999999999999999999999999998642 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..++.+||+||++.+++.+|++||+.+....++......++++.++++.+++.+..++++.+|||||||||+||+||+.+
T Consensus 76 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (214)
T TIGR02673 76 LLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNS 155 (214)
T ss_pred HHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCC
Confidence 35678999999999998899999998876655555445566788999999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1680 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~ 1680 (1833)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+
T Consensus 156 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 156 PPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999853 44 589999999999999999999999985
No 218
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=398.11 Aligned_cols=220 Identities=28% Similarity=0.432 Sum_probs=197.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..|+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 11 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 86 (258)
T PRK14268 11 PQIKVENLNLWYGE----KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDV 86 (258)
T ss_pred eeEEEeeeEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccc
Confidence 57999999999953 4599999999999999999999999999999999999985 89999999998753
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
.....++.+||+||++.+++ +|++||+.+.....+.+.+..++++.++++.+|+. +..++++.+|||||||||+|
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 165 (258)
T PRK14268 87 DVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCI 165 (258)
T ss_pred hHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHH
Confidence 22345778999999998888 89999999876666666666667889999999984 45688999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 166 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 166 ARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999887753
No 219
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=401.71 Aligned_cols=221 Identities=28% Similarity=0.453 Sum_probs=199.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||+|.|++. ..+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 3 ~l~~~~l~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (277)
T PRK13652 3 LIETRDLCYSYSGS---KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKF 79 (277)
T ss_pred eEEEEEEEEEeCCC---CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 48899999999532 359999999999999999999999999999999999999999999999998853 34456788
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+|||||++. .+...||.||+.+.....+.+.+..+++++++++.+||.+..++.+.+||||||||++|||||+.+|++|
T Consensus 80 i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 80 VGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred eEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 2335799999987665556666677788999999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 9999999999999999999999985 3 8999999999999999999999999999999999988753
No 220
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.5e-41 Score=390.61 Aligned_cols=210 Identities=25% Similarity=0.430 Sum_probs=191.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
|+++|++|.|++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . ....|
T Consensus 2 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 78 (222)
T PRK10908 2 IRFEHVSKAYLG---GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLR 78 (222)
T ss_pred EEEEeeEEEecC---CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHH
Confidence 789999999942 2369999999999999999999999999999999999999999999999998753 1 22357
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+|++||+.+.....+.+.++.++++.++++.+|+.+..++.+++||||||||++|||||+.+|++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (222)
T PRK10908 79 RQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAV 158 (222)
T ss_pred hheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCCE
Confidence 78999999998888899999999877666666666677889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEE
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 772 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~ 772 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 159 LLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999985 5899999999999999999999999999985
No 221
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.6e-41 Score=395.93 Aligned_cols=221 Identities=26% Similarity=0.373 Sum_probs=196.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC------
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD------ 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~------ 1537 (1833)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (250)
T PRK11264 3 AIEVKNLVKKFHG------QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQ 76 (250)
T ss_pred cEEEeceEEEECC------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccch
Confidence 6899999999963 4599999999999999999999999999999999999999999999999987531
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000224 1538 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1613 (1833)
Q Consensus 1538 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA 1613 (1833)
....++.+||+||++.+++.+|++||+.+... .++.......+.+.++++.+++.+..++++++|||||||||+||
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la 156 (250)
T PRK11264 77 KGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIA 156 (250)
T ss_pred hhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHH
Confidence 13456789999999999988999999987543 23444444556778899999998888999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1614 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1614 ~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+||+.+|++|||||||+|||+.+++.+++.|+++++ +| .|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 157 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 157 RALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999863 44 589999999999999999999999999999999888754
No 222
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=396.71 Aligned_cols=214 Identities=25% Similarity=0.413 Sum_probs=191.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ++
T Consensus 1 ml~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~----~~ 70 (255)
T PRK11248 1 MLQISHLYADYGG------KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP----GA 70 (255)
T ss_pred CEEEEEEEEEeCC------eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC----CC
Confidence 4789999999953 4599999999999999999999999999999999999999999999999987531 24
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
.+||+||++.+++.+|++||+.+.....+....+..+++.++++.++|.+..++++.+|||||||||+||+||+.+|++|
T Consensus 71 ~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~ll 150 (255)
T PRK11248 71 ERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLL 150 (255)
T ss_pred cEEEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 58999999999888999999987665556555555567889999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecChh
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSPQ 1688 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~--~G~i~~~g~~~ 1688 (1833)
||||||+|||+.+++.+++.|+++++++| +|||++|||++++..+|||+++|+ +|++++.++.+
T Consensus 151 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 151 LLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999999854444 689999999999999999999998 59999887654
No 223
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=401.31 Aligned_cols=218 Identities=28% Similarity=0.385 Sum_probs=197.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHHhhcc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDEIRKG 637 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~~r~~ 637 (1833)
++++||+|.|++ ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.. .....++.
T Consensus 2 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (274)
T PRK13644 2 IRLENVSYSYPD---GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred EEEEEEEEEcCC---CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhh
Confidence 789999999953 2359999999999999999999999999999999999999999999999998853 23456788
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+|||||++. .+...|+.||+.+.....+.+..+.+++++++++.+||.+..++++++||||||||++||+||+.+|++|
T Consensus 79 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 158 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECL 158 (274)
T ss_pred eEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999975 3666899999998766666777777788999999999999899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||||+|||+.+++.++++|++++ +|+|||++||+++++. .||||++|++|++++.|++.++.
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999986 5899999999999996 59999999999999999987764
No 224
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-41 Score=399.87 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=197.9
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
.+++++|++|.|++ +++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 6 ~~l~~~nl~~~~~~----~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPN----SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCC----CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 57999999999963 13469999999999999999999999999999999999999999999999999864 33456
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++++||+||++. .++.+|++||+.+.....+...++.++.+.++++.++|.+..++++.+||||||||++|||||+.+|
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 788999999974 5667899999987655445555555667888999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.++++|++++++ +++|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999998643 3368999999999996 799999999999999999887654
No 225
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-41 Score=397.09 Aligned_cols=218 Identities=28% Similarity=0.462 Sum_probs=192.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
++++||++.|+. ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . ....+
T Consensus 2 l~~~~l~~~~~~---~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR02315 2 LEVENLSKVYPN---GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLR 78 (243)
T ss_pred eEEEeeeeecCC---CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHH
Confidence 689999999951 2469999999999999999999999999999999999999999999999998753 1 23457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAV--------LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~--------~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~ 707 (1833)
+.+||+||++.+++.+||+||+.+... +.+....+.++++.++++.+||.+..++++.+||||||||++|||
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 158 (243)
T TIGR02315 79 RRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIAR 158 (243)
T ss_pred hheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHH
Confidence 789999999999999999999976421 111222344677899999999998889999999999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||++++|++|++++.|++.++
T Consensus 159 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 159 ALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999999984 3 89999999999999999999999999999999988665
No 226
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.2e-42 Score=387.55 Aligned_cols=203 Identities=31% Similarity=0.462 Sum_probs=180.7
Q ss_pred EEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEE
Q 000224 561 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGV 640 (1833)
Q Consensus 561 ~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~ 640 (1833)
+++||+|.|++. +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...++++||
T Consensus 1 ~~~~l~~~~~~~---~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG---TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA--KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc---CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh--HHhhcceEE
Confidence 367999999531 469999999999999999999999999999999999999999999999998753 345678999
Q ss_pred EccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 641 CPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 641 ~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
+||++. .+..+|++||+.++....+. .++++.++++.+||.+..++++++||||||||++|||||+.+|++||||
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 151 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFD 151 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999974 23467999999886544331 2357889999999999899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEE
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLK 772 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~ 772 (1833)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 152 EPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999984 6899999999999999999999999999874
No 227
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=396.19 Aligned_cols=221 Identities=23% Similarity=0.390 Sum_probs=198.2
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--------
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 629 (1833)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 4 NKLNVIDLHKRYGE----HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred ccEEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 35999999999953 469999999999999999999999999999999999999999999999987742
Q ss_pred ------cHHHhhcceEEEccCCCCCCCCCHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHcCCCccc-ccccCCCChhHHH
Q 000224 630 ------DMDEIRKGLGVCPQYDILFPELTVREHLEMFA-VLKGVKEELLESVVAEMVDEVGLADKV-NIVVRALSGGMKR 701 (1833)
Q Consensus 630 ------~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~-~~~~~~~~~~~~~v~~~l~~~~L~~~~-~~~~~~LSgGqkq 701 (1833)
+....++.+||+||++.+++.+|++||+.+.. ...+....+.++++.++++.+|+.+.. ++.+.+|||||||
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~q 159 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQ 159 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 12356788999999999999999999998743 334455556678899999999998764 8889999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 702 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 702 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|++|||||+.+|+++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (257)
T PRK10619 160 RVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQL 239 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999986 589999999999999999999999999999999998776
Q ss_pred Hh
Q 000224 781 KH 782 (1833)
Q Consensus 781 k~ 782 (1833)
.+
T Consensus 240 ~~ 241 (257)
T PRK10619 240 FG 241 (257)
T ss_pred hh
Confidence 43
No 228
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.9e-41 Score=388.30 Aligned_cols=213 Identities=28% Similarity=0.429 Sum_probs=189.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+|+++|++|.|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~ 75 (222)
T PRK10908 1 MIRFEHVSKAYLG-----GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVP 75 (222)
T ss_pred CEEEEeeEEEecC-----CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHH
Confidence 4789999999942 24599999999999999999999999999999999999999999999999988542 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
..++.+||+||++.+++.+|++||+.+....++....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 76 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 76 FLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred HHHhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 35678999999998888899999998876666655555556678899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC 1683 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~ 1683 (1833)
|++|||||||+|||+.+++.+++.|+++++ ++ +|||++||++++++.+|||+++|++|+++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNR-VG-VTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999864 44 589999999999999999999999999853
No 229
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-41 Score=389.51 Aligned_cols=212 Identities=27% Similarity=0.490 Sum_probs=188.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH---HHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM---DEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~---~~~r 635 (1833)
++++||++.|+++.+.+.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +. ...|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 7899999999643223469999999999999999999999999999999999999999999999998753 21 1233
Q ss_pred -cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 636 -KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 636 -~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
+.+||+||++.+++.+|++||+.+.....+.+..+.++++.++++.+|+.+..++.+++||||||||++|||||+.+|+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 161 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPS 161 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 6799999999999999999999886655555555556788999999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEE
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLK 772 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~ 772 (1833)
+|||||||+|||+.+++.++++|++++ .|+|||++||++++++. |||+++|++|+++
T Consensus 162 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 162 LVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999985 38999999999999976 8999999999975
No 230
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=399.41 Aligned_cols=221 Identities=24% Similarity=0.390 Sum_probs=195.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~---~~~~ 1540 (1833)
||+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 1 ml~~~~l~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 74 (271)
T PRK13638 1 MLATSDLWFRYQD------EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLA 74 (271)
T ss_pred CeEEEEEEEEcCC------cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHH
Confidence 4789999999953 459999999999999999999999999999999999999999999999999842 2234
Q ss_pred hccceEEEecCCCC-CCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDAL-LEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l-~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.+++|||+||++.+ +...|+.||+.+.....+....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 75 ~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 75 LRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred HHhheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 56789999999753 34468999998766555655555556778899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999864 44 589999999999999999999999999999999988754
No 231
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=394.39 Aligned_cols=219 Identities=29% Similarity=0.503 Sum_probs=197.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c-HHHhhc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D-MDEIRK 636 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~-~~~~r~ 636 (1833)
.++++||+|.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. + ....|+
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (241)
T PRK10895 3 TLTAKNLAKAYKG----RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARR 78 (241)
T ss_pred eEEEeCcEEEeCC----EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHh
Confidence 5889999999953 469999999999999999999999999999999999999999999999998753 2 233567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+||+||++.+++.+|+.||+.+..... +.+.++.+++++++++.+|+.+..++++++||||||||++|||||+.+|++
T Consensus 79 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 79 GIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred CeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8999999999999999999998765443 344455667889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999999999999986 5899999999999999999999999999999999987653
No 232
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-41 Score=388.26 Aligned_cols=208 Identities=34% Similarity=0.546 Sum_probs=186.0
Q ss_pred EEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcceE
Q 000224 561 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGLG 639 (1833)
Q Consensus 561 ~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ig 639 (1833)
+++||++.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+|
T Consensus 1 ~~~~l~~~~~~~--~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (211)
T cd03225 1 ELKNLSFSYPDG--ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVG 78 (211)
T ss_pred CceeEEEecCCC--CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhce
Confidence 368999999531 1469999999999999999999999999999999999999999999999998753 3445678899
Q ss_pred EEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 640 VCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 640 ~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|+||++. .++.+|++||+.+.....+......++++.++++.+||.+..++++++||||||||++|||||+.+|++|||
T Consensus 79 ~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 79 LVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred EEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999974 356789999998876555555555667889999999999888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCE
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGS 770 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~ 770 (1833)
||||+|||+.+++++++.|++++ +|+|||++||+++++..+||||++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999986 48999999999999999999999999985
No 233
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=407.95 Aligned_cols=228 Identities=19% Similarity=0.329 Sum_probs=199.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC----CCcceEEEcCccCCc-cH--
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP----PTTGDALVFGKNITA-DM-- 631 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~----p~~G~i~i~g~~i~~-~~-- 631 (1833)
.++++||++.|+.+.+.+.||+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. ..
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 48999999999764333579999999999999999999999999999999999998 489999999999853 22
Q ss_pred -HHh-hcceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHHH
Q 000224 632 -DEI-RKGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 632 -~~~-r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~---~~~~~~~~LSgGqkqrl 703 (1833)
.+. ++.|||+||++ .+++.+|+.+++....... +...++.++++.++|+.+||.+ ..++.+++|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 222 24799999998 5889999999987655443 5566667788999999999974 46889999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++|||||||+|||+.++++++++|++++ .|.|+|++|||++++..+||||++|.+|++++.|++.++.
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999985 3899999999999999999999999999999999998886
Q ss_pred hhhCC
Q 000224 782 HQYGV 786 (1833)
Q Consensus 782 ~~~g~ 786 (1833)
+....
T Consensus 243 ~~p~h 247 (326)
T PRK11022 243 RAPRH 247 (326)
T ss_pred hCCCC
Confidence 54433
No 234
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.8e-41 Score=392.62 Aligned_cols=219 Identities=29% Similarity=0.418 Sum_probs=193.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-Hh
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-AA 1541 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~-~~ 1541 (1833)
+|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .. ..
T Consensus 2 ~i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T TIGR03411 2 ILYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIA 75 (242)
T ss_pred eEEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHH
Confidence 6899999999953 4699999999999999999999999999999999999999999999999987542 22 23
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc--------CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIK--------GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1613 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--------g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA 1613 (1833)
++.+||+||++.+++.+|++||+.+..... +...+..++++.++++.+++.+..++++++||||||||++||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~la 155 (242)
T TIGR03411 76 RAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIG 155 (242)
T ss_pred hcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHH
Confidence 457999999999999999999998754311 112233455678899999999888999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1614 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1614 ~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++.++|||+++|++|++++.|+++++.
T Consensus 156 ral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 156 MLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLA-G-K-HSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHh-c-C-CEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 99999999999999999999999999999999985 3 3 58999999999999999999999999999999988875
No 235
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-41 Score=386.90 Aligned_cols=208 Identities=32% Similarity=0.537 Sum_probs=183.4
Q ss_pred EEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhccce
Q 000224 1467 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARRLI 1545 (1833)
Q Consensus 1467 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~~i 1545 (1833)
++|++|.|++. .+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+++|
T Consensus 2 ~~~l~~~~~~~----~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (211)
T cd03225 2 LKNLSFSYPDG----ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKV 77 (211)
T ss_pred ceeEEEecCCC----CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhc
Confidence 68999999631 1469999999999999999999999999999999999999999999999998864 234567789
Q ss_pred EEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1546 GYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1546 g~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
||+||++. .++.+|++||+.+.....+......++.+.++++.+++.+..++++.+|||||||||+|||||+.+|++||
T Consensus 78 ~~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lll 157 (211)
T cd03225 78 GLVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILL 157 (211)
T ss_pred eEEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999974 35678999999876555554444455677889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCE
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ 1680 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~ 1680 (1833)
|||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+
T Consensus 158 lDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 158 LDEPTAGLDPAGRRELLELLKKLKA-EG-KTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999864 34 689999999999999999999999985
No 236
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-41 Score=393.42 Aligned_cols=221 Identities=33% Similarity=0.533 Sum_probs=196.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-HHh
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P-KAA 1541 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~-~~~ 1541 (1833)
+++++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (241)
T PRK10895 3 TLTAKNLAKAYKG------RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARA 76 (241)
T ss_pred eEEEeCcEEEeCC------EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 6899999999953 4699999999999999999999999999999999999999999999999988642 2 234
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++.+||+||++.+++.+|++||+.+..... +....+.++.+.++++.+++.+..++++++|||||||||+||+||+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (241)
T PRK10895 77 RRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANP 156 (241)
T ss_pred HhCeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCC
Confidence 678999999999998899999998765433 2333344567888999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.+++.|++++ ++| .|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 157 KFILLDEPFAGVDPISVIDIKRIIEHLR-DSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHH-hcC-CEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999986 344 589999999999999999999999999999999887753
No 237
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=406.32 Aligned_cols=227 Identities=21% Similarity=0.293 Sum_probs=197.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC----CCceEEEEcCeeCCCC-h
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY----PTDGTAFIFGKDIRSD-P 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~----p~~G~i~i~G~~i~~~-~ 1538 (1833)
+|+++||++.|+... +...||+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++... .
T Consensus 3 ~L~v~~l~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~ 80 (326)
T PRK11022 3 LLNVDKLSVHFGDES--APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE 80 (326)
T ss_pred eEEEeCeEEEECCCC--ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCH
Confidence 689999999996421 22469999999999999999999999999999999999998 4899999999998652 2
Q ss_pred HH----hccceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHHH
Q 000224 1539 KA----ARRLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1539 ~~----~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~LSgG~kq 1608 (1833)
.. .++.|||+||++ .+.+.+|+.+++....... +...++.++++.++++.+||.+ ..++++++|||||||
T Consensus 81 ~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~Q 160 (326)
T PRK11022 81 KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ 160 (326)
T ss_pred HHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHH
Confidence 22 224799999997 5788999998886654433 4555556678899999999964 468999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
||+||+||+.+|++||+||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|.+|++++.|+++
T Consensus 161 Rv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g-~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~ 239 (326)
T PRK11022 161 RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKEN-MALVLITHDLALVAEAAHKIIVMYAGQVVETGKAH 239 (326)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999975444 68999999999999999999999999999999999
Q ss_pred HHHhh
Q 000224 1689 HLKTR 1693 (1833)
Q Consensus 1689 ~l~~~ 1693 (1833)
++.+.
T Consensus 240 ~~~~~ 244 (326)
T PRK11022 240 DIFRA 244 (326)
T ss_pred HHhhC
Confidence 98754
No 238
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.4e-41 Score=387.57 Aligned_cols=215 Identities=25% Similarity=0.440 Sum_probs=186.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH---
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK--- 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~--- 1539 (1833)
+|+++|+++.|+++. +.+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ..
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (221)
T TIGR02211 1 LLKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERA 78 (221)
T ss_pred CEEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHH
Confidence 378999999996421 124699999999999999999999999999999999999999999999999988542 21
Q ss_pred Hhc-cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1540 AAR-RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1540 ~~~-~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
..+ +++||+||++.+++.+|++||+.+....++....+..+.+.++++.+++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 158 (221)
T TIGR02211 79 KLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVN 158 (221)
T ss_pred HHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhC
Confidence 123 6799999999999889999999876554444444445667889999999888899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1682 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~ 1682 (1833)
+|++|||||||+|||+.+++.+++.|++++++.| .|||++||++++++. |||+++|++|+++
T Consensus 159 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 159 QPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 9999999999999999999999999999864434 589999999999975 8999999999975
No 239
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=399.48 Aligned_cols=218 Identities=23% Similarity=0.343 Sum_probs=195.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc---cHHHhhc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 636 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 636 (1833)
|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....|+
T Consensus 2 l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 77 (271)
T PRK13638 2 LATSDLWFRYQD----EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQ 77 (271)
T ss_pred eEEEEEEEEcCC----cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHh
Confidence 789999999953 359999999999999999999999999999999999999999999999998742 2345677
Q ss_pred ceEEEccCCCC-CCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDIL-FPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l-~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+||+||++.+ +...|+.||+.+.....+....+..++++++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~l 157 (271)
T PRK13638 78 QVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARY 157 (271)
T ss_pred heEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCCE
Confidence 89999999753 34568999998876666666666677889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 158 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 158 LLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999985 5899999999999999999999999999999999987764
No 240
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.5e-41 Score=406.00 Aligned_cols=231 Identities=25% Similarity=0.427 Sum_probs=203.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC---cceEEEcCccCCc-c---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITA-D--- 630 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~-~--- 630 (1833)
..++++||++.|+.+.+...+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 57999999999975444567999999999999999999999999999999999999996 9999999999853 2
Q ss_pred HHHhh-cceEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcc---cccccCCCChhHHHHH
Q 000224 631 MDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADK---VNIVVRALSGGMKRKL 703 (1833)
Q Consensus 631 ~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~~---~~~~~~~LSgGqkqrl 703 (1833)
....| +.|||+||++ .+++.+|+.+++....... +.+.++..+++.++++.+||.+. .++.+++||||||||+
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv 170 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRV 170 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHH
Confidence 22334 5799999998 6889999999998765544 45666777889999999999753 4789999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++||+||||+|||+.++++++++|+++++ |.|+|++|||++++..+||||++|.+|++++.|++.++.
T Consensus 171 ~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 171 MIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVF 250 (330)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999853 899999999999999999999999999999999998887
Q ss_pred hhhCCcE
Q 000224 782 HQYGVGY 788 (1833)
Q Consensus 782 ~~~g~gy 788 (1833)
+.....|
T Consensus 251 ~~p~~py 257 (330)
T PRK09473 251 YQPSHPY 257 (330)
T ss_pred hCCCCHH
Confidence 6544333
No 241
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=400.70 Aligned_cols=224 Identities=27% Similarity=0.403 Sum_probs=200.7
Q ss_pred ceEEEEeeEEEecCCC--CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--cHHH
Q 000224 558 RCIQIRKLHKVYATKR--GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA--DMDE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~--~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~--~~~~ 633 (1833)
..++++||+|+|++.. +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 3689999999996432 13469999999999999999999999999999999999999999999999998853 2345
Q ss_pred hhcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 634 IRKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
.++.+|||||++. ++ ..||.||+.+.....+.+..+.+++++++++.+||.+..++++.+||||||||++|||||+.
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~ 161 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAM 161 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 6788999999974 44 46999999987766677677777889999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
+|++|||||||+|||+.+++.++++|++++ .|+|||++||+++++.. |||+++|++|++++.|++.++...
T Consensus 162 ~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 162 RPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999984 38999999999999986 999999999999999999887643
No 242
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.2e-41 Score=386.99 Aligned_cols=208 Identities=31% Similarity=0.567 Sum_probs=188.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc---cHHHhhc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 636 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 636 (1833)
++++||++.|++ +.+++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 l~~~~l~~~~~~----~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (213)
T cd03262 1 IEIKNLHKSFGD----FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQ 76 (213)
T ss_pred CEEEEEEEEECC----eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHh
Confidence 468999999953 469999999999999999999999999999999999999999999999998742 3345678
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+||+||++.+++.+|+.||+.++.. .++...++.++++.++++.+|+.+..++++.+||||||||++||+||+.+|++
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 156 (213)
T cd03262 77 KVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKV 156 (213)
T ss_pred cceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCE
Confidence 89999999999999999999988643 34555556677889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++
T Consensus 157 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 157 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999986 589999999999999999999999999974
No 243
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-41 Score=394.92 Aligned_cols=210 Identities=26% Similarity=0.433 Sum_probs=191.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+..+|
T Consensus 2 l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~----~~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG----KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEG----PGAERG 73 (255)
T ss_pred EEEEEEEEEeCC----eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCC----CCCcEE
Confidence 789999999953 469999999999999999999999999999999999999999999999998753 224589
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+||.||+.+.....+....+.++++.++++.+||.+..++++.+||||||||++|||||+.+|++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLD 153 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLD 153 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999988766666666666778999999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-h-CCcEEEEEcCCHHHHHhhcCEEEEee--CCEEEeecCH
Q 000224 720 EPTSGMDPYSMRLTWQLIKKI-K-KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGSS 777 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~-~-~g~tiil~tH~~~e~~~l~Dri~im~--~G~l~~~G~~ 777 (1833)
|||+|||+.+++.++++|+++ + +|+|||++||+++++..+||||++|+ +|++++.++.
T Consensus 154 EPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 154 EPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999997 4 48999999999999999999999998 5999887764
No 244
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=399.25 Aligned_cols=225 Identities=25% Similarity=0.423 Sum_probs=199.5
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCc---eEEEEcCeeCCC-C
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTD---GTAFIFGKDIRS-D 1537 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~---G~i~i~G~~i~~-~ 1537 (1833)
+.+|+++|++|.|++. .+.+++++||+|++||++||+||||||||||+++|+|+++|++ |+|.++|.++.. .
T Consensus 3 ~~~l~i~~l~~~~~~~----~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~ 78 (282)
T PRK13640 3 DNIVEFKHVSFTYPDS----KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKT 78 (282)
T ss_pred CceEEEEEEEEEcCCC----CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCC
Confidence 3579999999999632 2459999999999999999999999999999999999999998 899999999865 3
Q ss_pred hHHhccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1538 PKAARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1538 ~~~~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
....++++||+||++. +++..|++||+.+.....+.+.++..+++.++++.++|.+..++++++||||||||++||+||
T Consensus 79 ~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 79 VWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred HHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 3456778999999974 566789999998765555666666667788999999999889999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++ .|||+++|++|++++.|+++++..
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNN-LTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999864434 68999999999996 799999999999999999988754
No 245
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-41 Score=397.64 Aligned_cols=222 Identities=27% Similarity=0.480 Sum_probs=194.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~---~~~~ 1540 (1833)
+|+++|++++|++ .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 1 ~l~~~~l~~~~~~-----~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (275)
T PRK13639 1 ILETRDLKYSYPD-----GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLE 75 (275)
T ss_pred CEEEEEEEEEeCC-----CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHH
Confidence 4789999999963 2459999999999999999999999999999999999999999999999999852 2234
Q ss_pred hccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++.|||+||++. .+..+|+.||+.+.....+...++..+++.++++.++|.+..++++++||||||||++||+||+.+
T Consensus 76 ~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 76 VRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 6778999999963 233479999998654333444445556788899999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~-~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNK-EG-ITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999864 44 689999999999999999999999999999999998754
No 246
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-41 Score=394.43 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=195.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
+.|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 5 ~~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 80 (253)
T PRK14242 5 PKMEARGLSFFYGD----FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHV 80 (253)
T ss_pred cEEEEeeeEEEECC----eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccccc
Confidence 57999999999953 359999999999999999999999999999999999974 689999999998753
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+.+||+||++.+++ .||+||+.+.....+. ..+..+++++++++.+|+.+ ..++++.+|||||||||+
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~ 159 (253)
T PRK14242 81 DVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLC 159 (253)
T ss_pred CHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHH
Confidence 23456788999999998888 5999999887655554 23445678899999999853 468889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 160 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 160 IARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999977899999999999999999999999999999999987764
No 247
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-41 Score=392.32 Aligned_cols=218 Identities=25% Similarity=0.409 Sum_probs=196.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-------cH
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------DM 631 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------~~ 631 (1833)
.++++|+++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..
T Consensus 2 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T PRK11124 2 SIQLNGINCFYGA----HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEEEEeeEEEECC----eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhH
Confidence 4789999999953 359999999999999999999999999999999999999999999999998631 23
Q ss_pred HHhhcceEEEccCCCCCCCCCHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000224 632 DEIRKGLGVCPQYDILFPELTVREHLEM-FAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~-~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
...++.+||+||++.+++.+|+.||+.+ .....+...++..+++.++++.+|+.+..++.+.+||||||||++|||||+
T Consensus 78 ~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~ 157 (242)
T PRK11124 78 RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 4567789999999999999999999975 334455555556678899999999998889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
.+|+++||||||+|||+.+++.++++|++++ +|+|+|++||+++++..+|||+++|++|+++..|++.++
T Consensus 158 ~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 158 MEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999986 489999999999999999999999999999999987654
No 248
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.6e-41 Score=393.81 Aligned_cols=222 Identities=22% Similarity=0.398 Sum_probs=196.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC------
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------ 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~------ 1536 (1833)
..++++||++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE------HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 46899999999953 469999999999999999999999999999999999999999999999998742
Q ss_pred --------ChHHhccceEEEecCCCCCCCCCHHHHHHHHH-HHcCCChhhHHHHHHHHHHHcCCccc-cCCCCCCCChhH
Q 000224 1537 --------DPKAARRLIGYCPQFDALLEYLTVQEHLELYA-RIKGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGN 1606 (1833)
Q Consensus 1537 --------~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~-~~~g~~~~~~~~~~~~~l~~~~L~~~-~~~~~~~LSgG~ 1606 (1833)
.....++++||+||++.+++.+|++||+.+.. ...+....+.++++.++++.+|+.+. .++++.+|||||
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~ 157 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQ 157 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHH
Confidence 12345678999999999999899999998643 23344444556678889999999876 488999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||++|||||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+||||++|++|++++.|+
T Consensus 158 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 158 QQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EG-KTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999863 44 689999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
++++.+
T Consensus 236 ~~~~~~ 241 (257)
T PRK10619 236 PEQLFG 241 (257)
T ss_pred HHHhhh
Confidence 888754
No 249
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.8e-41 Score=387.48 Aligned_cols=218 Identities=25% Similarity=0.405 Sum_probs=189.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH--
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-- 1539 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~-- 1539 (1833)
++|+++|++++|+++. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++... ..
T Consensus 5 ~~l~~~~l~~~~~~~~--~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGE--HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCC--cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 5799999999996421 013589999999999999999999999999999999999999999999999988642 22
Q ss_pred -Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1540 -AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1540 -~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
.. ++.+||+||++.+++.+|+.||+.+....++.+..+.++++.++++.+++.+..++++.+||||||||++||+||+
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~ 162 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFN 162 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHh
Confidence 12 3579999999999998999999987655555544455667889999999998889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEe
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCI 1684 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~ 1684 (1833)
.+|++|||||||+|||+.+++.+++.|++++++.| +|||++|||+++++. |||+++|++|++++.
T Consensus 163 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~-~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 163 GRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLAAR-CDRRLRLVNGQLQEE 227 (228)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHh-CCEEEEEECCEEEec
Confidence 99999999999999999999999999999864434 589999999999865 999999999998753
No 250
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=399.60 Aligned_cols=222 Identities=31% Similarity=0.448 Sum_probs=196.8
Q ss_pred eEEEEeeEEEecCCCC-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHH
Q 000224 559 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMD 632 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~ 632 (1833)
.++++||++.|++... .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 3789999999964211 1369999999999999999999999999999999999999999999999998753 234
Q ss_pred HhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHH
Q 000224 633 EIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 633 ~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
..|+.|||+||++ .+++ .||+||+.+.....+.+.++.+++++++++.+||. ...++++.+||||||||++|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 160 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGIL 160 (280)
T ss_pred HHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 5678899999997 4555 69999999876555666666677889999999997 467999999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 161 AMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999986 4899999999999999999999999999999999987764
No 251
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-41 Score=394.47 Aligned_cols=220 Identities=29% Similarity=0.458 Sum_probs=196.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..++++|+++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 81 (254)
T PRK14273 6 AIIETENLNLFYTD----FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNF 81 (254)
T ss_pred ceEEEeeeEEEeCC----ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccc
Confidence 46999999999953 3599999999999999999999999999999999999997 59999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCC----CcccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGL----ADKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L----~~~~~~~~~~LSgGqkqrl~ 704 (1833)
.....|+.+||+||++.+++ +||+||+.+.....+. .....++++.++++.+++ .+..++++++||||||||++
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~ 160 (254)
T PRK14273 82 DILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLC 160 (254)
T ss_pred cHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHH
Confidence 23456788999999998885 8999999987655443 344566788999999998 34578899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 161 IARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999888754
No 252
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=393.90 Aligned_cols=221 Identities=29% Similarity=0.453 Sum_probs=196.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 78 (253)
T PRK14267 3 FAIETVNLRVYYGS----NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDV 78 (253)
T ss_pred ceEEEEeEEEEeCC----eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 36899999999953 4599999999999999999999999999999999999997 49999999998851
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~--~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl 703 (1833)
+....|+++||+||++.+++.+||.||+.+....++. +.+..++++.++++.+|+. +..++++.+||||||||+
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 79 DPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRL 158 (253)
T ss_pred ChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHH
Confidence 3345677899999999999999999999887654443 3445567788999999984 356889999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFE 237 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999999999778999999999999999999999999999999999877643
No 253
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=393.02 Aligned_cols=219 Identities=26% Similarity=0.396 Sum_probs=196.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc-cHH
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA-DMD 632 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~-~~~ 632 (1833)
.++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. +..
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 78 (250)
T PRK14247 3 KIEIRDLKVSFGQ----VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVI 78 (250)
T ss_pred eEEEEeeEEEECC----eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHH
Confidence 4899999999953 4699999999999999999999999999999999999984 79999999998853 344
Q ss_pred HhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHHH
Q 000224 633 EIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSLG 706 (1833)
Q Consensus 633 ~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~--~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~lA 706 (1833)
..|+.+||+||++.+++.+||.||+.+.....+. +.++.++++.++++.+||.+ ..++.+.+||||||||++||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 79 ELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred HHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 5678899999999888899999999886554432 34455678899999999853 56889999999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||+.+|+++||||||+|||+.++++++++|+++++|+|+|++||+++++..+|||+++|++|++++.|++.++.
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999977899999999999999999999999999999999987764
No 254
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-41 Score=389.27 Aligned_cols=216 Identities=27% Similarity=0.443 Sum_probs=186.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc----HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD----MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~----~~~~r 635 (1833)
|+++||++.|+++++...+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431113699999999999999999999999999999999999999999999999988542 24567
Q ss_pred cceEEEccCC--CCCCCCCHHHHHHHHHHhcCCCH-HHHHHH-HHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHh
Q 000224 636 KGLGVCPQYD--ILFPELTVREHLEMFAVLKGVKE-ELLESV-VAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 636 ~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~~~-~~~~~~-v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
+.+||+||++ .+++.+||+||+.+.....+... ++..++ ++++++.+++. +..++++.+||||||||++|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~ 161 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALA 161 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHh
Confidence 8899999998 46778999999987655443222 222223 36899999996 5789999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|++++.|
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 162 LNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999985 3 899999999999999999999999999998654
No 255
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.5e-41 Score=390.76 Aligned_cols=204 Identities=32% Similarity=0.448 Sum_probs=182.4
Q ss_pred cccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEe-cCCCCCCCCC
Q 000224 1481 DAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCP-QFDALLEYLT 1559 (1833)
Q Consensus 1481 ~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ig~~p-Q~~~l~~~lT 1559 (1833)
+.+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.......++++||+| |++.+++.+|
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~t 111 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLP 111 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCc
Confidence 345799999999999999999999999999999999999999999999999987544445677899998 5577888899
Q ss_pred HHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHH
Q 000224 1560 VQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRF 1639 (1833)
Q Consensus 1560 v~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~ 1639 (1833)
++||+.+....++....+..+.+.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 112 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~ 191 (236)
T cd03267 112 VIDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQEN 191 (236)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHH
Confidence 99999887766666555556677888999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1640 MWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1640 l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
+.+.|++++++++ +|||++||++++++.+|||+++|.+|++++.|
T Consensus 192 l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 192 IRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999864434 68999999999999999999999999998764
No 256
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=394.22 Aligned_cols=219 Identities=27% Similarity=0.412 Sum_probs=195.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.|+++||+|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 2 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (258)
T PRK13548 2 MLEARNLSVRLGG----RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARR 77 (258)
T ss_pred eEEEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhh
Confidence 4889999999953 469999999999999999999999999999999999999999999999998753 33445678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh------C
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI------G 711 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~------~ 711 (1833)
+||+||++.+++.+||+||+.+.....+...+..+++++++++.+||.+..++.+.+|||||||||+||+||+ .
T Consensus 78 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~ 157 (258)
T PRK13548 78 RAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDG 157 (258)
T ss_pred eEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCC
Confidence 9999999988788999999988654333333445567899999999998889999999999999999999999 5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|++|||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 158 PPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999999999999999985 4899999999999999999999999999999999876653
No 257
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=396.27 Aligned_cols=223 Identities=28% Similarity=0.438 Sum_probs=195.3
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1540 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~ 1540 (1833)
+.+|+++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 9 ~~~l~i~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG------RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC------EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 457999999999953 469999999999999999999999999999999999999999999999998754 3445
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH-HcC---CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR-IKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.++.+||+||++.+++.+|+.||+.+... ..+ ......++++.++++.+++.+..++++++|||||||||+||+||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral 162 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLV 162 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 66789999999888888999999986421 111 11223345678899999998888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+.+|+||||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 163 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 163 AQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999999999999999864434 68999999999999999999999999999999887764
No 258
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-41 Score=392.75 Aligned_cols=221 Identities=24% Similarity=0.427 Sum_probs=195.2
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~ 1536 (1833)
.++|+++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 10 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~ 83 (258)
T PRK14268 10 QPQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYE 83 (258)
T ss_pred ceeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEccc
Confidence 357999999999952 4599999999999999999999999999999999999985 89999999998753
Q ss_pred C---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 D---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 ~---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
. ....++.+||+||++.+++ +|++||+.+.....+.+..+..+.+.++++.+++. +..++++.+||||||||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 84 PDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred ccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHH
Confidence 2 2345678999999988887 89999998866555655544556678899999883 45788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
|+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~-~-~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK-K-D-YTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-h-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 689999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 240 ~~~ 242 (258)
T PRK14268 240 IFH 242 (258)
T ss_pred Hhc
Confidence 754
No 259
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-40 Score=402.76 Aligned_cols=229 Identities=24% Similarity=0.407 Sum_probs=199.1
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC---ceEEEEcCeeCCCC-
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT---DGTAFIFGKDIRSD- 1537 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~---~G~i~i~G~~i~~~- 1537 (1833)
+++|+++||++.|+.+. +...+|+||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++...
T Consensus 10 ~~~L~i~~l~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~ 87 (330)
T PRK09473 10 DALLDVKDLRVTFSTPD--GDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLP 87 (330)
T ss_pred CceEEEeCeEEEEecCC--CCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCC
Confidence 45799999999996421 2356999999999999999999999999999999999999996 99999999998652
Q ss_pred hHH---hc-cceEEEecCC--CCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHH
Q 000224 1538 PKA---AR-RLIGYCPQFD--ALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1538 ~~~---~~-~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~LSgG~k 1607 (1833)
..+ .| ++|||+||++ .+.+.+|+.+++....... +....+..+++.++++.++|.+ ..++.+++||||||
T Consensus 88 ~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 88 EKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHH
Confidence 222 23 4799999997 6889999999987655443 4555556677889999999964 35789999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
||++||+||+.+|++||+||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|.+|++++.|++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g-~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFN-TAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999975444 6899999999999999999999999999999999
Q ss_pred hHHHhh
Q 000224 1688 QHLKTR 1693 (1833)
Q Consensus 1688 ~~l~~~ 1693 (1833)
+++.+.
T Consensus 247 ~~i~~~ 252 (330)
T PRK09473 247 RDVFYQ 252 (330)
T ss_pred HHHHhC
Confidence 998764
No 260
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=393.50 Aligned_cols=223 Identities=28% Similarity=0.433 Sum_probs=193.9
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~- 1540 (1833)
.+++++|++|.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 77 (255)
T PRK11300 4 PLLSVSGLMMRFGG------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQI 77 (255)
T ss_pred ceEEEeeEEEEECC------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHH
Confidence 47999999999952 4699999999999999999999999999999999999999999999999988653 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHH-------cCC------C--hhhHHHHHHHHHHHcCCccccCCCCCCCChh
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARI-------KGV------A--EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGG 1605 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~-------~g~------~--~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG 1605 (1833)
.+..++|+||++.+++.+|++||+.+.... .+. . ..+..+.+.++++.+|+.+..++++++||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 78 ARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYG 157 (255)
T ss_pred HhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHH
Confidence 345699999999999999999999875321 011 1 1122345778899999988899999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1606 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1606 ~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
||||++||+||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 236 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHN-VTVLLIEHDMKLVMGISDRIYVVNQGTPLANG 236 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcC-CEEEEEeCCHHHHHHhCCEEEEEECCeEEecC
Confidence 99999999999999999999999999999999999999999864434 68999999999999999999999999999999
Q ss_pred ChhHHHh
Q 000224 1686 SPQHLKT 1692 (1833)
Q Consensus 1686 ~~~~l~~ 1692 (1833)
+++++.+
T Consensus 237 ~~~~~~~ 243 (255)
T PRK11300 237 TPEEIRN 243 (255)
T ss_pred CHHHHhh
Confidence 9887643
No 261
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5e-41 Score=384.31 Aligned_cols=210 Identities=30% Similarity=0.442 Sum_probs=187.5
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---HH
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---KA 1540 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~~ 1540 (1833)
++++|+++.|++ .+.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... . ..
T Consensus 1 l~~~~l~~~~~~-----~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~ 75 (214)
T cd03292 1 IEFINVTKTYPN-----GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPY 75 (214)
T ss_pred CEEEEEEEEeCC-----CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHH
Confidence 468999999953 24599999999999999999999999999999999999999999999999988542 1 23
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
.++.++|+||++.+++.+|++||+.+....++...++.++++.++++.+++.+..++++.+||||||||++|||||+.+|
T Consensus 76 ~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (214)
T cd03292 76 LRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSP 155 (214)
T ss_pred HHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCC
Confidence 56789999999999999999999988766555555555667888999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
+++||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|++
T Consensus 156 ~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 156 TILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999853 44 5899999999999999999999999974
No 262
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.3e-41 Score=383.05 Aligned_cols=204 Identities=29% Similarity=0.456 Sum_probs=179.2
Q ss_pred EEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccce
Q 000224 1466 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLI 1545 (1833)
Q Consensus 1466 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~i 1545 (1833)
+++|++|+|++ .+.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...++++
T Consensus 1 ~~~~l~~~~~~-----~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~i 73 (205)
T cd03226 1 RIENISFSYKK-----GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA--KERRKSI 73 (205)
T ss_pred CcccEEEEeCC-----cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh--HHhhcce
Confidence 36899999953 1459999999999999999999999999999999999999999999999998753 3456789
Q ss_pred EEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1546 GYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1546 g~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
||+||++. .+..+|++||+.++....+. ..+++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 74 ~~~~q~~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 149 (205)
T cd03226 74 GYVMQDVDYQLFTDSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLI 149 (205)
T ss_pred EEEecChhhhhhhccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEE
Confidence 99999974 23457999999876543321 12467889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1682 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~ 1682 (1833)
|||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++|+++
T Consensus 150 lDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 150 FDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999863 44 58999999999999999999999999974
No 263
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=395.05 Aligned_cols=224 Identities=24% Similarity=0.388 Sum_probs=198.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
++++++|++|.|++. .+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 6 ~~l~i~~l~~~~~~~----~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSD----ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCC----CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 579999999999631 2458999999999999999999999999999999999999999999999998854 34556
Q ss_pred ccceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++++||+||++. +++..|+++|+.+.....+.+.++..+.+.++++.+++.+..++++.+||||||||++|||||+.+|
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 788999999974 6777899999987655555555555667788999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++.. ||||++|++|++++.|+++++.+
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHN-ITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999864334 689999999999986 99999999999999999988754
No 264
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.4e-41 Score=394.18 Aligned_cols=229 Identities=23% Similarity=0.351 Sum_probs=196.7
Q ss_pred ceEEEEeEEEEcCCCcc---ccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h
Q 000224 1463 AIIYLRNLRKVYPGGKR---SDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P 1538 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~---~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~ 1538 (1833)
++|+++||+|+|++... .+.+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 47999999999963110 0134699999999999999999999999999999999999999999999999988642 2
Q ss_pred HHhccceEEEecCCC--CCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000224 1539 KAARRLIGYCPQFDA--LLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~ 1614 (1833)
...++.+||+||++. +++.+|+.+++.+..... +....+..+.+.++++.+++. ...++++.+|||||||||+||+
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 334567999999974 567789999998765543 334444556788899999995 6778899999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||+.+|+||||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQG-ISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhc
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999888764
No 265
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.2e-41 Score=386.80 Aligned_cols=219 Identities=26% Similarity=0.440 Sum_probs=186.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh----H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP----K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~----~ 1539 (1833)
+|+++|++++|++.. ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... .
T Consensus 1 ~l~~~~v~~~~~~~~--~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (228)
T cd03257 1 LLEVKNLSVSFPTGG--GSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRK 78 (228)
T ss_pred CeEEEeeeEeccCCC--cceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHH
Confidence 478999999996321 0126999999999999999999999999999999999999999999999999886532 3
Q ss_pred HhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCCh-hhHHHH-HHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000224 1540 AARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAE-YRMDDV-VMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~-~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~ 1614 (1833)
..++++||+||++ .+++.+|++||+.+.....+... ....+. +.++++.+++. +..++++.+||||||||++|||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 158 (228)
T cd03257 79 IRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIAR 158 (228)
T ss_pred HhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHH
Confidence 4567899999998 46678999999987654443222 122222 35788999995 5789999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 159 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 159 ALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999864334 58999999999999999999999999998754
No 266
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-41 Score=391.68 Aligned_cols=210 Identities=27% Similarity=0.419 Sum_probs=187.9
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
.++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..
T Consensus 10 ~~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~----~~ 79 (257)
T PRK11247 10 GTPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA----EA 79 (257)
T ss_pred CCcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH----Hh
Confidence 357999999999953 45999999999999999999999999999999999999999999999998753 35
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++.+||+||++.+++.+|++||+.+.. ++ ..++++.++++.++|.+..++++.+|||||||||+||+||+.+|+
T Consensus 80 ~~~i~~v~q~~~l~~~~tv~enl~~~~--~~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 80 REDTRLMFQDARLLPWKKVIDNVGLGL--KG----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred hCceEEEecCccCCCCCcHHHHHHhcc--cc----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 678999999999988899999998642 11 124567789999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
+|||||||+|||+.+++.+++.|+++.++.+ +|||++|||+++++.+||||++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999999864444 58999999999999999999999999999888654
No 267
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.8e-41 Score=390.52 Aligned_cols=201 Identities=27% Similarity=0.468 Sum_probs=183.0
Q ss_pred cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEEEc-cCCCCCCCCCH
Q 000224 575 NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCP-QYDILFPELTV 653 (1833)
Q Consensus 575 ~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~-Q~~~l~~~lTv 653 (1833)
.+.+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++.+||++ |++.+++.+|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 45799999999999999999999999999999999999999999999999876544445677899998 56778889999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHH
Q 000224 654 REHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLT 733 (1833)
Q Consensus 654 ~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l 733 (1833)
+||+.+.....+...++.++++.++++.+|+.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 192 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENI 192 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHH
Confidence 99999877776766666677889999999999888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 734 WQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 734 ~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
+++|++++ +++|||++||+++++..+||++++|++|++++.|
T Consensus 193 ~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 193 RNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999985 3799999999999999999999999999998654
No 268
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=7.3e-41 Score=386.65 Aligned_cols=215 Identities=25% Similarity=0.446 Sum_probs=190.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHH---H
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMD---E 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~---~ 633 (1833)
..|+++||++.|++......+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.. .
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 469999999999642211359999999999999999999999999999999999999999999999998753 221 2
Q ss_pred h-hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 634 I-RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 634 ~-r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
. ++.+||+||++.+++.+|+.||+.+....++.+..+.++++.++++.+|+.+..++++.+||||||||++|||||+.+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~~~ 164 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGR 164 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 2 367999999999999999999998866555555556678899999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEe
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKC 773 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~ 773 (1833)
|++|||||||+|||+.+++.++++|++++ + |+|||++||++++++. |||+++|++|++++
T Consensus 165 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~ 226 (228)
T PRK10584 165 PDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQE 226 (228)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEe
Confidence 99999999999999999999999999984 3 8999999999999965 99999999999864
No 269
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=389.27 Aligned_cols=220 Identities=25% Similarity=0.415 Sum_probs=192.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-H
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-A 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~-~ 1540 (1833)
++++++|++|.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .. .
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~ 77 (237)
T PRK11614 4 VMLSFDKVSAHYGK------IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKI 77 (237)
T ss_pred cEEEEEeEEEeeCC------ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHH
Confidence 47999999999952 4699999999999999999999999999999999999999999999999988653 22 3
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHc-CCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEF-DLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~-~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++.+||+||++.+++.+|++||+.+..... ...+..+.+.++++.+ ++.+..++++.+||||||||++||+||+.+
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 78 MREAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred HHhCEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 5678999999998998899999998743222 1223344566777777 577777889999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QG-MTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999864 44 689999999999999999999999999999999988753
No 270
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-41 Score=389.01 Aligned_cols=220 Identities=26% Similarity=0.399 Sum_probs=194.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-------
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~------- 1536 (1833)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T PRK11124 2 SIQLNGINCFYGA------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred EEEEEeeEEEECC------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchh
Confidence 5789999999953 459999999999999999999999999999999999999999999999998731
Q ss_pred ChHHhccceEEEecCCCCCCCCCHHHHHHH-HHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000224 1537 DPKAARRLIGYCPQFDALLEYLTVQEHLEL-YARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1537 ~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
.....+++|||+||++.+++.+|+.||+.+ .....+....+..+.+.++++.+|+.+..++++.+||||||||++||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 155 (242)
T PRK11124 76 AIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARA 155 (242)
T ss_pred hHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 123456789999999999999999999975 3334455444455678889999999888899999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+|||+++|.+|+++..|+++++.
T Consensus 156 l~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIRELA-ETG-ITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHH-HcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 999999999999999999999999999999985 344 58999999999999999999999999999999887653
No 271
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-41 Score=387.75 Aligned_cols=217 Identities=29% Similarity=0.397 Sum_probs=189.6
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hH-Hhc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PK-AAR 1542 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~-~~~ 1542 (1833)
|+++||++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... .. ..+
T Consensus 1 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (230)
T TIGR03410 1 LEVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERAR 74 (230)
T ss_pred CEEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHH
Confidence 468999999963 4699999999999999999999999999999999999999999999999988642 22 235
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcC-CccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFD-LLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~-L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+++||+||++.+++.+|++||+.+....++.. ..+...++++.++ +.+..++++.+||||||||++||+||+.+|+
T Consensus 75 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (230)
T TIGR03410 75 AGIAYVPQGREIFPRLTVEENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPK 151 (230)
T ss_pred hCeEEeccCCcccCCCcHHHHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 68999999999999899999998765544322 1234566777776 5677899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+|||||||+|||+.+++.+++.|++++++.+ +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 152 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 152 LLLLDEPTEGIQPSIIKDIGRVIRRLRAEGG-MAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHcCC-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999864334 68999999999999999999999999999999988763
No 272
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=396.29 Aligned_cols=225 Identities=27% Similarity=0.468 Sum_probs=195.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----Ch
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DP 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-----~~ 1538 (1833)
.|+++|++|.|++... ..+.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ..
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3789999999964210 11459999999999999999999999999999999999999999999999998753 23
Q ss_pred HHhccceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHH
Q 000224 1539 KAARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
...++.|||+||++ .+++ .|++||+.+.....+...++..+.+.++++.++|. ...++++.+||||||||++||+|
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~a 159 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGI 159 (280)
T ss_pred HHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 45677899999996 4555 69999998765555555555566778899999997 46799999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 160 LAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SG-MTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999863 44 689999999999999999999999999999999988754
No 273
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.6e-41 Score=383.60 Aligned_cols=209 Identities=27% Similarity=0.450 Sum_probs=186.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC---ChHHh
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS---DPKAA 1541 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~---~~~~~ 1541 (1833)
++++|+++.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 1 l~~~~l~~~~~~------~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (213)
T cd03262 1 IEIKNLHKSFGD------FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINEL 74 (213)
T ss_pred CEEEEEEEEECC------eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHH
Confidence 468999999953 459999999999999999999999999999999999999999999999998853 23345
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++++||+||++.+++.+|++||+.+... .++....+.++++.++++.+++.+..++++.+||||||||++||+||+.+|
T Consensus 75 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 154 (213)
T cd03262 75 RQKVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNP 154 (213)
T ss_pred HhcceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCC
Confidence 7789999999999988999999987643 345444445567788999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
++|||||||+|||+.+++.+++.|+++++ .| +|||++||++++++.+|||+++|++|++
T Consensus 155 ~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 155 KVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999864 44 5899999999999999999999999974
No 274
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-41 Score=395.69 Aligned_cols=219 Identities=29% Similarity=0.457 Sum_probs=195.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc---cHHHhhc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---DMDEIRK 636 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---~~~~~r~ 636 (1833)
++++||++.|++ .+.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 2 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 2 LETRDLKYSYPD---GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred EEEEEEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHh
Confidence 789999999953 2359999999999999999999999999999999999999999999999998742 2335678
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.|||+||++. .+...||.||+.+.....+...++.++++.++++.+||.+..++++++||||||||++|||||+.+|++
T Consensus 79 ~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~l 158 (275)
T PRK13639 79 TVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMKPEI 158 (275)
T ss_pred heEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8999999973 333469999998765444555566677899999999999989999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+||||||+|||+.++++++++|++++ +|+|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999986 5899999999999999999999999999999999987764
No 275
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-41 Score=399.09 Aligned_cols=222 Identities=30% Similarity=0.444 Sum_probs=195.4
Q ss_pred eEEEEeeEEEecCCCC-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc------cH
Q 000224 559 CIQIRKLHKVYATKRG-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA------DM 631 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~------~~ 631 (1833)
.|+++||+|.|+++.+ .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +.
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 5899999999964321 1359999999999999999999999999999999999999999999999998742 23
Q ss_pred HHhhcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHH
Q 000224 632 DEIRKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~a 708 (1833)
...|+.+||+||++. +++ .|++||+.+.....+...++..+++.++++.++|. +..++++++||||||||++||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lara 164 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQ-ETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGI 164 (289)
T ss_pred HHHhccEEEEEeCcchhhhh-hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHH
Confidence 456788999999973 454 59999998876555555566667788999999995 67899999999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|+.+|++|||||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|++++.|++.++.
T Consensus 165 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 165 IAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999985 3899999999999999999999999999999999987663
No 276
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-41 Score=387.16 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=196.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++|+++.|++ .+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|.++..... .++.+|
T Consensus 1 l~~~~l~~~~~~-----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~-~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE-----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP-EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC-----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh-hHcCEE
Confidence 468999999952 28999999999999999999999999999999999999999999999998754222 367899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+++.+|+.||+.+.....+.+..+.++++.++++.+||.+..++++.+||||||||++||||++.+|++++||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 154 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLD 154 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999999999999999988765556666667778899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||+|||+.++++++++|+++.+ |+|||++||+++++..+|||+++|++|++++.|++..+..
T Consensus 155 EPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 155 EPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999853 8999999999999999999999999999999999876643
No 277
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=392.59 Aligned_cols=220 Identities=28% Similarity=0.428 Sum_probs=193.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH-HHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r 635 (1833)
..++++|++|.|+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +. ...+
T Consensus 4 ~~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (255)
T PRK11300 4 PLLSVSGLMMRFG----GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIAR 79 (255)
T ss_pred ceEEEeeEEEEEC----CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHh
Confidence 3699999999995 3469999999999999999999999999999999999999999999999998754 22 2345
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHh-------cCC--------CHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVL-------KGV--------KEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 700 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~-------~~~--------~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqk 700 (1833)
..++|+||++.+++.+||+||+.+.... .+. ...+..+++.++++.+||.+..++++++||||||
T Consensus 80 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 80 MGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred cCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHHHH
Confidence 6799999999999999999999875321 111 1112345688899999999889999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH
Q 000224 701 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 778 (1833)
Q Consensus 701 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~ 778 (1833)
||++||+||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|++.
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 99999999999999999999999999999999999999985 3 899999999999999999999999999999999887
Q ss_pred HHH
Q 000224 779 FLK 781 (1833)
Q Consensus 779 ~Lk 781 (1833)
++.
T Consensus 240 ~~~ 242 (255)
T PRK11300 240 EIR 242 (255)
T ss_pred HHh
Confidence 653
No 278
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-40 Score=390.57 Aligned_cols=221 Identities=25% Similarity=0.366 Sum_probs=195.5
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-------
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD------- 1537 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~------- 1537 (1833)
|+++||++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 1 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~ 74 (252)
T TIGR03005 1 VRFSDVTKRFGI------LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPL 74 (252)
T ss_pred CEEEEEEEEeCC------eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccc
Confidence 468999999953 4599999999999999999999999999999999999999999999999987431
Q ss_pred -------hHHhccceEEEecCCCCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHH
Q 000224 1538 -------PKAARRLIGYCPQFDALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1538 -------~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqr 1609 (1833)
....++.+||++|++.+++.+|+.||+.+... .++.......+.+.++++.+++.+..++.+.+||||||||
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qr 154 (252)
T TIGR03005 75 VPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQR 154 (252)
T ss_pred cccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHH
Confidence 12457789999999999998999999987432 2344444455678889999999888899999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++||+||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 155 VAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHD-LTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999864434 689999999999999999999999999999999888
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 234 ~~~ 236 (252)
T TIGR03005 234 IFR 236 (252)
T ss_pred Hhc
Confidence 754
No 279
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-41 Score=389.00 Aligned_cols=218 Identities=25% Similarity=0.436 Sum_probs=193.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH-HHhh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIR 635 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r 635 (1833)
..++++||+|.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +. ...+
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 79 (237)
T PRK11614 4 VMLSFDKVSAHYGK----IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMR 79 (237)
T ss_pred cEEEEEeEEEeeCC----ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHH
Confidence 46899999999953 469999999999999999999999999999999999999999999999998754 22 2356
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-CCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEV-GLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~-~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
+.+||+||++.+++.+||.||+.+..... .....+++++++++.+ ++.+..++++++||||||||++|||||+.+|+
T Consensus 80 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 80 EAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred hCEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 78999999999999999999998754322 2333456678888888 58777888999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 999999999999999999999999985 5899999999999999999999999999999999987774
No 280
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-41 Score=352.56 Aligned_cols=215 Identities=27% Similarity=0.447 Sum_probs=191.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
+.+++|+++|+. .==.++++|+.||+++|+||+|||||||+|+|+|+..|.+|+|.|+|.|.+... -.++-+.
T Consensus 2 l~L~~V~~~y~~------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~-P~~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGH------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASP-PAERPVS 74 (231)
T ss_pred ccccceEEeeCc------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCC-cccCChh
Confidence 567889999953 335788999999999999999999999999999999999999999999986432 2345699
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
+++|++.||..+||++|+.++.. .|+. ..+.+++++.++..+||..+.++.+.+||||||||++|||+|+.+-+|++|
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~-P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLL 153 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLS-PGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLL 153 (231)
T ss_pred hhhhccccchhhhhhhhhcccCC-cccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEe
Confidence 99999999999999999988532 1222 245577899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||+|+|||.-|.++..++.++. ++.|++++||+.+++..++||++++++|+|...|+..++..
T Consensus 154 DEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 154 DEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred cCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 99999999999999999999985 48999999999999999999999999999999999876643
No 281
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=392.83 Aligned_cols=219 Identities=26% Similarity=0.412 Sum_probs=195.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..|+++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|+++|.++..
T Consensus 18 ~~l~~~nl~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 18 IKMRARDVSVFYGE----KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred ceEEEEeEEEEECC----EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 57999999999953 4699999999999999999999999999999999999975 89999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~--~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl 703 (1833)
+....|+.+||+||++.+++. |+.||+.+....++. +..+.++++.++++.+|+.+ ..++.+.+||||||||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 172 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRL 172 (267)
T ss_pred chHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 234567889999999988875 999999887655443 33455677899999999964 46788999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 173 CIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999977889999999999999999999999999999999987764
No 282
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.6e-41 Score=391.80 Aligned_cols=219 Identities=28% Similarity=0.443 Sum_probs=196.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----------
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---------- 629 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---------- 629 (1833)
|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 1 i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 76 (252)
T TIGR03005 1 VRFSDVTKRFGI----LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVP 76 (252)
T ss_pred CEEEEEEEEeCC----eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccc
Confidence 468999999953 469999999999999999999999999999999999999999999999988742
Q ss_pred ----cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHH
Q 000224 630 ----DMDEIRKGLGVCPQYDILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ----~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~ 704 (1833)
.....++.+||++|++.+++.+|+.||+.+... .++......++++.++++.+|+.+..++.+.+||||||||++
T Consensus 77 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 77 ADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVA 156 (252)
T ss_pred cchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHH
Confidence 123457889999999999999999999987532 345555566778899999999998889999999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+++||||||+|||+.+++.++++|+++. + |+|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFR 236 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999985 3 8999999999999999999999999999999999877643
No 283
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=395.25 Aligned_cols=221 Identities=27% Similarity=0.471 Sum_probs=198.2
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..++++|+++.|++. ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|+
T Consensus 6 ~~l~~~nl~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 83 (271)
T PRK13632 6 VMIKVENVSFSYPNS--ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRK 83 (271)
T ss_pred eEEEEEeEEEEcCCC--CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhc
Confidence 469999999999631 2469999999999999999999999999999999999999999999999998853 3446678
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+|||||++. .++.+|++||+.+.....+.+.++.++++.++++.+||.+..++.+.+||||||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (271)
T PRK13632 84 KIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEI 163 (271)
T ss_pred ceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999974 677789999998876555566666677899999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||||+|||+.+++.++++|++++ + ++|||++||+++++. .|||+++|++|++++.|++.++.
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~ 230 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEIL 230 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999985 3 589999999999996 79999999999999999876653
No 284
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=393.98 Aligned_cols=225 Identities=27% Similarity=0.380 Sum_probs=198.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+|+++|++++|++. ..+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.. .....+
T Consensus 4 ~l~~~~l~~~~~~~---~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKE---SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCC---CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 78999999999632 12459999999999999999999999999999999999999999999999999864 334567
Q ss_pred cceEEEecCCC-CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDA-LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~-l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+.+||+||++. .++..|+.||+.+.....+....+..+++.++++.++|.+..++++.+||||||||++|||||+.+|+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~ 160 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPE 160 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 88999999974 56678999999876554455555556678889999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|||||||+|||+.+++.+++.|++++++.| +|||++||+++++. .|||+++|++|++++.|+++++.+.
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 161 IIILDESTSMLDPTGRQEIMRVIHEIKEKYQ-LTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999865434 68999999999997 5999999999999999999887654
No 285
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.5e-40 Score=392.10 Aligned_cols=228 Identities=26% Similarity=0.406 Sum_probs=195.8
Q ss_pred eEEEEeEEEEcCCCc---cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-
Q 000224 1464 IIYLRNLRKVYPGGK---RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P- 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~---~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~- 1538 (1833)
+|+++||+|.|++.. ..+++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 589999999996310 00135699999999999999999999999999999999999999999999999988642 2
Q ss_pred --HHhccceEEEecCC--CCCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHH
Q 000224 1539 --KAARRLIGYCPQFD--ALLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1539 --~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~l 1612 (1833)
...++.|||+||++ .+++.+|++||+.+.... .+......++++.++++.+++. ...++++.+||||||||++|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 22467899999996 466789999999765432 2344434456788899999996 67899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||||+.+|++|||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFG-TAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 9999999999999999999999999999999999864434 689999999999999999999999999999999988764
No 286
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=386.00 Aligned_cols=218 Identities=30% Similarity=0.473 Sum_probs=198.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++||+++|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|+++|.++.... ..++.+|
T Consensus 1 l~~~~l~~~~~~----~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~-~~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG----FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLP-PHKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC----eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCC-hhhcceE
Confidence 468999999953 46999999999999999999999999999999999999999999999999875422 2367899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||+|++.+++.+|+.||+.+.....+......+++++++++.+|+.+..++.+.+||||||||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999988776666666666778899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||+|||+.++++++++|+++++ |+|||++||+++++..+|||+++|++|++.+.|++.++.+
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 99999999999999999999863 8999999999999999999999999999999998877654
No 287
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=384.86 Aligned_cols=219 Identities=29% Similarity=0.482 Sum_probs=195.8
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|+++.|++ + +++|+||++++||++||+|+||||||||+++|+|+++|++|+|+++|.++..... .++.
T Consensus 1 l~~~~l~~~~~~------~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~-~~~~ 72 (235)
T cd03299 1 LKVENLSKDWKE------F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP-EKRD 72 (235)
T ss_pred CeeEeEEEEeCC------c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh-hHcC
Confidence 468999999952 2 7999999999999999999999999999999999999999999999998865322 3578
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|+.||+.+.....+....+..+.+.++++.++|.+..++++.+|||||||||+||+||+.+|++++
T Consensus 73 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 152 (235)
T cd03299 73 ISYVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILL 152 (235)
T ss_pred EEEEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999889999999876555555545556677889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|||||+|||+.+++.+++.|++++.+.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 153 lDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 153 LDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 9999999999999999999999864434 689999999999999999999999999999999887754
No 288
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=390.93 Aligned_cols=219 Identities=26% Similarity=0.432 Sum_probs=195.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 630 (1833)
.++++|++|.|++ +.+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 4 ~l~i~~v~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~ 79 (258)
T PRK14241 4 RIDVKDLNIYYGS----FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVD 79 (258)
T ss_pred cEEEeeEEEEECC----EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccC
Confidence 5899999999953 4699999999999999999999999999999999999974 79999999998742 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||++|++.+++.+||+||+.+.....+. +.+..+++++++++.+|+. +..++.+.+|||||||||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 80 PVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred hHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 345678899999999999999999999887655443 4455667889999999984 46788999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEee------CCEEEeecCHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA------NGSLKCCGSSLF 779 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~------~G~l~~~G~~~~ 779 (1833)
||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|+ +|++++.|++.+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~~ 239 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDDTEK 239 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCCHHH
Confidence 99999999999999999999999999999999999778999999999999999999999997 899999999877
Q ss_pred HH
Q 000224 780 LK 781 (1833)
Q Consensus 780 Lk 781 (1833)
+.
T Consensus 240 ~~ 241 (258)
T PRK14241 240 IF 241 (258)
T ss_pred HH
Confidence 64
No 289
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=393.34 Aligned_cols=223 Identities=23% Similarity=0.319 Sum_probs=195.2
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1540 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~ 1540 (1833)
+.+|+++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 5 ~~~l~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~ 78 (265)
T PRK10253 5 VARLRGEQLTLGYGK------YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKE 78 (265)
T ss_pred ccEEEEEEEEEEECC------EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHH
Confidence 357999999999963 459999999999999999999999999999999999999999999999998854 3345
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH-HcC---CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR-IKG---VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~-~~g---~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.++.+||+||++.+++.+|++||+.+... ..+ ...+..++.+.++++.+++.+..++++.+||||||||++|||||
T Consensus 79 ~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral 158 (265)
T PRK10253 79 VARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVL 158 (265)
T ss_pred HhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHH
Confidence 56789999999988888999999976421 111 11122345678899999998889999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+.+|++|||||||+|||+.+++.+++.|++++++.| .|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 159 ~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 159 AQETAIMLLDEPTTWLDISHQIDLLELLSELNREKG-YTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999864334 68999999999999999999999999999999988765
No 290
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=389.54 Aligned_cols=221 Identities=24% Similarity=0.421 Sum_probs=194.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCC--
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIR-- 1535 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~-- 1535 (1833)
.+|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++.
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~ 76 (253)
T PRK14267 3 FAIETVNLRVYYGS------NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSP 76 (253)
T ss_pred ceEEEEeEEEEeCC------eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccc
Confidence 46899999999953 4599999999999999999999999999999999999987 4999999999885
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1536 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1536 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
. .....++++||+||++.+++.+|+.||+.+....++. +.+...+.+.++++.+++. +..++++.+|||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 77 DVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred ccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHH
Confidence 2 3345677899999999999989999999876554443 2334445677889999884 3578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+||||++|++|++++.|+++
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELK-K-E-YTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-h-C-CEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999985 3 3 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 234 ~~~~ 237 (253)
T PRK14267 234 KVFE 237 (253)
T ss_pred HHHh
Confidence 8754
No 291
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=391.21 Aligned_cols=220 Identities=31% Similarity=0.492 Sum_probs=196.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC--C---CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 629 (1833)
+.|+++|++|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++..
T Consensus 11 ~~l~i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~ 86 (259)
T PRK14274 11 EVYQINGMNLWYGQ----HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKV 86 (259)
T ss_pred ceEEEeeEEEEECC----eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccccc
Confidence 57999999999953 469999999999999999999999999999999999997 3 69999999998752
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+.+||+||++.+++. |++||+.+.....+. ..++.+++++++++.+++.+ ..++++.+||||||||++
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 87 DLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred CHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 234567889999999988875 999999887655553 34555677889999999853 468899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|+|++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999887653
No 292
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=393.88 Aligned_cols=221 Identities=24% Similarity=0.394 Sum_probs=199.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
+.++++|+++.|++. .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++
T Consensus 6 ~~l~i~~l~~~~~~~--~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (269)
T PRK13648 6 SIIVFKNVSFQYQSD--ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRK 83 (269)
T ss_pred ceEEEEEEEEEcCCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHh
Confidence 469999999999642 2359999999999999999999999999999999999999999999999998853 4456778
Q ss_pred ceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+|||||++. +++..|+.+|+.+.....+.+.+...+++.++++.+|+.+..++.+.+||||||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (269)
T PRK13648 84 HIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSV 163 (269)
T ss_pred heeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999984 677889999998876655666666677889999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||||+|||+.+++.++++|++++ + |+|||++||+++++.. ||||++|++|++++.|++.++.
T Consensus 164 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~ 230 (269)
T PRK13648 164 IILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEIF 230 (269)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999985 3 8999999999999986 9999999999999999987764
No 293
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.3e-40 Score=392.78 Aligned_cols=224 Identities=25% Similarity=0.417 Sum_probs=196.6
Q ss_pred eEEEEeeEEEecCCC-----CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c--
Q 000224 559 CIQIRKLHKVYATKR-----GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D-- 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~-----~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~-- 630 (1833)
.|+++||+|.|+... +++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 488999999996321 13579999999999999999999999999999999999999999999999998753 1
Q ss_pred -HHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHH
Q 000224 631 -MDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVL-KGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 -~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~-~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||+||++ .+++.+||+||+.+.... .+...+..++++.++++.+|+. ...++++.+||||||||++|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 123567899999997 467789999999876542 3444445567889999999996 67899999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 999999999999999999999999999999999985 3 8999999999999999999999999999999999887753
No 294
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.3e-41 Score=387.20 Aligned_cols=214 Identities=29% Similarity=0.475 Sum_probs=189.3
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH-HHhhcc
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM-DEIRKG 637 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~-~~~r~~ 637 (1833)
|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +. ...++.
T Consensus 1 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (230)
T TIGR03410 1 LEVSNLNVYYGQ----SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAG 76 (230)
T ss_pred CEEEeEEEEeCC----eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhC
Confidence 468999999953 469999999999999999999999999999999999999999999999998753 22 234578
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-CCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVG-LADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~-L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++.+++.+|+.||+.+.....+.. .++.++++++.++ +.+..++++++||||||||++|||||+.+|+++
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~il 153 (230)
T TIGR03410 77 IAYVPQGREIFPRLTVEENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLL 153 (230)
T ss_pred eEEeccCCcccCCCcHHHHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999998875544322 2334577788887 567789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
||||||+|||+.++++++++|+++++ |+|||++||+++++..+||||++|++|++++.|++.++
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 154 LLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999863 89999999999999999999999999999999998766
No 295
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-41 Score=381.54 Aligned_cols=211 Identities=26% Similarity=0.420 Sum_probs=183.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++|+|++ +. .|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .++.
T Consensus 1 i~~~~l~~~~~~------~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~-~~~~ 71 (211)
T cd03298 1 VRLDKIRFSYGE------QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP-ADRP 71 (211)
T ss_pred CEEEeEEEEeCC------Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH-hHcc
Confidence 468999999953 22 39999999999999999999999999999999999999999999998864322 3567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+.........+..++++.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 72 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~lll 151 (211)
T cd03298 72 VSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLL 151 (211)
T ss_pred EEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999989999999864332111112335567889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|
T Consensus 152 lDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 152 LDEPFAALDPALRAEMLDLVLDLHAETK-MTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999864444 68999999999999999999999999998754
No 296
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-40 Score=393.73 Aligned_cols=225 Identities=28% Similarity=0.390 Sum_probs=197.7
Q ss_pred ceEEEEeeEEEecCCC-----CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cH
Q 000224 558 RCIQIRKLHKVYATKR-----GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DM 631 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~-----~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~ 631 (1833)
..|+++||+|+|+.+. +.+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 3699999999996321 13469999999999999999999999999999999999999999999999998853 23
Q ss_pred HHhhcceEEEccCCC--CCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHH
Q 000224 632 DEIRKGLGVCPQYDI--LFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~ 707 (1833)
...++.+|||||++. +++.+|+.+++.+..... +....+.++++.++++.+||. +..++.+.+||||||||++||+
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 344568999999974 678889999998765543 445555667889999999995 6678889999999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||+.+|++|||||||+|||+.+++.++++|++++ .|+|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 239 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADVLA 239 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHhc
Confidence 9999999999999999999999999999999985 38999999999999999999999999999999999877754
No 297
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-41 Score=382.68 Aligned_cols=209 Identities=25% Similarity=0.412 Sum_probs=183.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
|+++|+++.|++ +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 1 i~~~~l~~~~~~----~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~-~~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE----QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAP-PADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC----Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCC-HhHccEE
Confidence 468999999953 22 3999999999999999999999999999999999999999999999875322 2357899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|++|++.+++.+|++||+.+.........+..++++.++++.+||.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999987543211112334667899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.++++|++++ .|+|||++||+++++..+|||+++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999985 3899999999999999999999999999998654
No 298
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=387.31 Aligned_cols=217 Identities=28% Similarity=0.407 Sum_probs=191.9
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
.++++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG------KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 5889999999953 458999999999999999999999999999999999999999999999998854 334567
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
+.+||+||++.+++ .|++||+.+....++. ..+++.++++.+++. +..++++.+||||||||++||+||+.+|+
T Consensus 77 ~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 151 (241)
T PRK14250 77 RKIGMVFQQPHLFE-GTVKDNIEYGPMLKGE----KNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPE 151 (241)
T ss_pred hcEEEEecCchhch-hhHHHHHhcchhhcCc----HHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 78999999998886 6999999865433321 234577889999996 57889999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+||||++|++|+++..|+++++..
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 152 VLLLDEPTSALDPTSTEIIEELIVKLKNKMN-LTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhCC-CEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 9999999999999999999999999864344 589999999999999999999999999999999988754
No 299
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=396.45 Aligned_cols=226 Identities=25% Similarity=0.370 Sum_probs=194.2
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC------C
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS------D 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~------~ 1537 (1833)
.|+++|++|+|++... ....+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 6 ~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 6 DIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred eEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4899999999964210 01359999999999999999999999999999999999999999999999998742 2
Q ss_pred hHHhccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHH
Q 000224 1538 PKAARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1538 ~~~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~ 1614 (1833)
....++.|||+||++. +++ .|++||+.+.....+...++..+.+.++++.++|. +..++++.+||||||||++|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQ-ETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhhhh-hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 3456778999999963 444 69999998765444554444556678899999994 6789999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||+.+|++|||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYK-KRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFS 240 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999988753
No 300
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.2e-41 Score=384.54 Aligned_cols=205 Identities=29% Similarity=0.489 Sum_probs=180.1
Q ss_pred EEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEEE
Q 000224 562 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVC 641 (1833)
Q Consensus 562 i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~ 641 (1833)
++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..++.+||+
T Consensus 2 ~~~l~~~~~~----~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~----~~~~~i~~v 73 (213)
T cd03235 2 VEDLTVSYGG----HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE----KERKRIGYV 73 (213)
T ss_pred cccceeEECC----EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH----HHHhheEEe
Confidence 6799999953 46999999999999999999999999999999999999999999999998763 356789999
Q ss_pred ccCCCCC--CCCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 642 PQYDILF--PELTVREHLEMFAVLKG----VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 642 ~Q~~~l~--~~lTv~e~l~~~~~~~~----~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
||++.++ ..+||+||+.+.....+ ...+..+++++++++.+|+.+..++++.+||||||||++|||||+.+|++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 153 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDL 153 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9998763 34799999987543211 12234567789999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++| +++.|
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 154 LLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999986 6899999999999999999999999886 55443
No 301
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=388.63 Aligned_cols=221 Identities=24% Similarity=0.400 Sum_probs=192.9
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~ 1536 (1833)
.++|+++|++++|++ +.+++++||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 4 ~~~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 77 (253)
T PRK14242 4 PPKMEARGLSFFYGD------FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYD 77 (253)
T ss_pred CcEEEEeeeEEEECC------eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccc
Confidence 367999999999953 459999999999999999999999999999999999974 689999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kq 1608 (1833)
.....++++||+||++.+++ .|++||+.+....++.. .+..++++.++++.+++.+ ..++++.+|||||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 78 PHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQ 156 (253)
T ss_pred cccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHH
Confidence 23345778999999988887 59999998765555542 2334566788899999853 468889999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
||+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-A-R-YTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 234 ~~~~ 237 (253)
T PRK14242 234 QIFT 237 (253)
T ss_pred HHHc
Confidence 8754
No 302
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-41 Score=352.25 Aligned_cols=222 Identities=25% Similarity=0.464 Sum_probs=201.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.+.+.+++.+|+++. +.+++|+|++|.+||.++++||+|||||||+|+++|+.+|+.|+|.++|..++.+-. .=
T Consensus 3 ~l~~~~~sl~y~g~~--~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga----er 76 (259)
T COG4525 3 MLNVSHLSLSYEGKP--RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA----ER 76 (259)
T ss_pred eeehhheEEecCCcc--hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc----cc
Confidence 366788999997653 569999999999999999999999999999999999999999999999998864321 24
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
|+|+|++.|+|.+|+.||++|+.+++|+++.+..+.+.+++..+||++..++.+.+||||||||+.|||||+.+|++|+|
T Consensus 77 gvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlL 156 (259)
T COG4525 77 GVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLLLL 156 (259)
T ss_pred eeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHH-h-CCcEEEEEcCCHHHHHhhcCEEEEee--CCEEEeecCHHHHHhhhCCc
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKI-K-KGRIILLTTHSMDEAEELGDRIAIMA--NGSLKCCGSSLFLKHQYGVG 787 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~-~-~g~tiil~tH~~~e~~~l~Dri~im~--~G~l~~~G~~~~Lk~~~g~g 787 (1833)
|||+++||.-+|+++.++|.++ + .|+.++++||+++||.-+|+|+++|+ .|+++..=++.+= ++|-.|
T Consensus 157 DEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~df~-rR~aag 228 (259)
T COG4525 157 DEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLDFA-RRYAAG 228 (259)
T ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCCHH-HHhhcC
Confidence 9999999999999999999886 3 49999999999999999999999999 6899887666543 344333
No 303
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=391.13 Aligned_cols=220 Identities=27% Similarity=0.406 Sum_probs=196.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..++++|+++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 12 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 12 SKIQVRNLNFYYGK----FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred ceEEEEEEEEEeCC----eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 46999999999953 369999999999999999999999999999999999986 589999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+++||+||++.+++ .|++||+.+..... +.+.++.+++++++++.+++. +..++.+.+||||||||++
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 166 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLC 166 (260)
T ss_pred chHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHH
Confidence 33456788999999998887 79999998865543 456666677899999999984 4568889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 167 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 244 (260)
T PRK10744 167 IARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFT 244 (260)
T ss_pred HHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999778899999999999999999999999999999999877643
No 304
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=388.11 Aligned_cols=220 Identities=21% Similarity=0.344 Sum_probs=194.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-C
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-D 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~-~ 1537 (1833)
+++++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 76 (250)
T PRK14247 3 KIEIRDLKVSFGQ------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMD 76 (250)
T ss_pred eEEEEeeEEEECC------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCC
Confidence 5899999999953 4599999999999999999999999999999999999974 79999999998864 3
Q ss_pred hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHHH
Q 000224 1538 PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKLS 1611 (1833)
Q Consensus 1538 ~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqrl~ 1611 (1833)
....++.|||+||++.+++.+|++||+.+.....+. +..+..+.+.++++.++|.+ ..++++.+||||||||++
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 156 (250)
T PRK14247 77 VIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLC 156 (250)
T ss_pred HHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHH
Confidence 445677899999999888889999999876544332 23344566788999999853 468999999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1612 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1612 lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 157 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 157 IARALAFQPEVLLADEPTANLDPENTAKIESLFLELK-K-D-MTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 9999999999999999999999999999999999984 3 4 68999999999999999999999999999999998875
Q ss_pred h
Q 000224 1692 T 1692 (1833)
Q Consensus 1692 ~ 1692 (1833)
+
T Consensus 234 ~ 234 (250)
T PRK14247 234 T 234 (250)
T ss_pred c
Confidence 4
No 305
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=401.61 Aligned_cols=228 Identities=21% Similarity=0.304 Sum_probs=193.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC----CCceEEEEcCeeCCC-C
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY----PTDGTAFIFGKDIRS-D 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~----p~~G~i~i~G~~i~~-~ 1537 (1833)
++|+++||+|.|+.+. +...||+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 2 ~~L~v~~l~~~y~~~~--~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~ 79 (330)
T PRK15093 2 PLLDIRNLTIEFKTSD--GWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLS 79 (330)
T ss_pred CeEEEeeeEEEEeCCC--CCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCC
Confidence 3689999999996421 23569999999999999999999999999999999999997 589999999999864 2
Q ss_pred hHH----hccceEEEecCCC--CCCCCCHHHHHHHHHHH---cCC---ChhhHHHHHHHHHHHcCCcc---ccCCCCCCC
Q 000224 1538 PKA----ARRLIGYCPQFDA--LLEYLTVQEHLELYARI---KGV---AEYRMDDVVMEKLVEFDLLK---HAKKPSFTL 1602 (1833)
Q Consensus 1538 ~~~----~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~---~g~---~~~~~~~~~~~~l~~~~L~~---~~~~~~~~L 1602 (1833)
... .++.|||+||++. +.+.+|+.+++...... .+. ...+.++++.++++.+||.+ ..++++.+|
T Consensus 80 ~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~L 159 (330)
T PRK15093 80 PRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYEL 159 (330)
T ss_pred HHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhC
Confidence 222 2357999999974 67889999999753221 111 11234567889999999974 468999999
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEE
Q 000224 1603 SGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLR 1682 (1833)
Q Consensus 1603 SgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~ 1682 (1833)
||||||||+||+||+.+|++|||||||+|||+.+++.++++|+++.++.| .|||++|||++++..+||||++|.+|+++
T Consensus 160 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g-~tii~itHdl~~v~~~~dri~vm~~G~iv 238 (330)
T PRK15093 160 TEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNN-TTILLISHDLQMLSQWADKINVLYCGQTV 238 (330)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999965444 69999999999999999999999999999
Q ss_pred EecChhHHHhh
Q 000224 1683 CIGSPQHLKTR 1693 (1833)
Q Consensus 1683 ~~g~~~~l~~~ 1693 (1833)
+.|+++++.+.
T Consensus 239 e~g~~~~i~~~ 249 (330)
T PRK15093 239 ETAPSKELVTT 249 (330)
T ss_pred EECCHHHHHhC
Confidence 99999888653
No 306
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=385.09 Aligned_cols=219 Identities=23% Similarity=0.397 Sum_probs=190.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++||+|+|++ + ..++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++..... .++
T Consensus 1 ~l~~~~l~~~~~~------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~ 71 (232)
T PRK10771 1 MLKLTDITWLYHH------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP-SRR 71 (232)
T ss_pred CeEEEEEEEEECC------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh-hhc
Confidence 4789999999953 2 238999999999999999999999999999999999999999999998764322 356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
.+||+||++.+++.+|+.||+.+.........+..++++.++++.+++.+..++++.+||||||||++||+|++.+|+++
T Consensus 72 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 151 (232)
T PRK10771 72 PVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPIL 151 (232)
T ss_pred cEEEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 79999999999998999999976432111112233556888999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 152 lLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 152 LLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999864434 589999999999999999999999999999999988764
No 307
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=393.59 Aligned_cols=220 Identities=24% Similarity=0.352 Sum_probs=195.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 10 ~~l~i~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 10 TTFALRNVSFRVPG----RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred ceEEEeeEEEEECC----EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 56999999999953 469999999999999999999999999999999999999999999999998743 3445677
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcC---CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAV-LKG---VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~---~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
.+||+||++.+++.+|+.||+.+... ..+ ......+++++++++.+++.+..++++++|||||||||+|||||+.+
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 89999999888889999999987431 111 11233456789999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999985 3 899999999999999999999999999999999876653
No 308
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-40 Score=383.83 Aligned_cols=220 Identities=33% Similarity=0.522 Sum_probs=197.1
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
|+++|++++|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++..... .++.
T Consensus 1 l~~~~l~~~~~~------~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~ 73 (232)
T cd03300 1 IELENVSKFYGG------FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP-HKRP 73 (232)
T ss_pred CEEEeEEEEeCC------eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh-hhcc
Confidence 468999999953 469999999999999999999999999999999999999999999999998865332 3578
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+....++.......+.+.++++.+++.+..++.+.+||||||||++|||||+.+|+++|
T Consensus 74 i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~lll 153 (232)
T cd03300 74 VNTVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLL 153 (232)
T ss_pred eEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999998889999999876655555545556677889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++.+.|+++++..
T Consensus 154 lDEP~~gLD~~~~~~l~~~l~~~~~~~~-~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 154 LDEPLGALDLKLRKDMQLELKRLQKELG-ITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 9999999999999999999999864334 589999999999999999999999999999999887764
No 309
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-41 Score=383.19 Aligned_cols=230 Identities=28% Similarity=0.488 Sum_probs=206.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-C----CcceEEEcCccCCc-c---
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-P----TTGDALVFGKNITA-D--- 630 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-p----~~G~i~i~g~~i~~-~--- 630 (1833)
++++||+..|....+...||+||||++++||++||+|++|||||||.+.|.|+++ | .+|+|.++|.|+.. +
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6899999999887667889999999999999999999999999999999999998 4 57999999998853 2
Q ss_pred HHHhh-cceEEEccCC--CCCCCCCHHHHHHHHHHhcC-C-CHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHH
Q 000224 631 MDEIR-KGLGVCPQYD--ILFPELTVREHLEMFAVLKG-V-KEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRK 702 (1833)
Q Consensus 631 ~~~~r-~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~-~-~~~~~~~~v~~~l~~~~L~~---~~~~~~~~LSgGqkqr 702 (1833)
+.++| +.|+++||++ .|.|-+||.+.+.-..+..+ . .+++.++++.++|+.+||++ ..+.++++||||||||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQR 161 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQR 161 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHH
Confidence 23455 6799999997 68999999999876666543 3 46678899999999999986 4599999999999999
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 703 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 703 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|.||+||+.+|++||.||||++||+..+.++.++|++++ .|.|+|+||||+..+..+||||+||..|++++.|+..++
T Consensus 162 V~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i 241 (316)
T COG0444 162 VMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEI 241 (316)
T ss_pred HHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHH
Confidence 999999999999999999999999999999999999996 489999999999999999999999999999999999988
Q ss_pred HhhhCCcEE
Q 000224 781 KHQYGVGYT 789 (1833)
Q Consensus 781 k~~~g~gy~ 789 (1833)
.+...+-|+
T Consensus 242 ~~~P~HPYT 250 (316)
T COG0444 242 FKNPKHPYT 250 (316)
T ss_pred hcCCCChHH
Confidence 776666664
No 310
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=387.74 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=195.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC---CCcceEEEcCccCCc-cHHHh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITA-DMDEI 634 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~-~~~~~ 634 (1833)
.|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. +....
T Consensus 2 ~~~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~ 77 (246)
T PRK14269 2 IAKTTNLNLFYGK----KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVAL 77 (246)
T ss_pred ceeeeeeEEEECC----EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHH
Confidence 4789999999953 469999999999999999999999999999999999984 799999999998853 34556
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHHHHH
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSLGIA 708 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~--~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~lA~a 708 (1833)
|+.+||+||++.+|+ .|++||+.++....+. ..+..++++.++++.++|. +..++.+.+||||||||++||||
T Consensus 78 ~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 78 RKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARA 156 (246)
T ss_pred hhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHH
Confidence 788999999999987 6999999987655543 2244566788999999995 34688899999999999999999
Q ss_pred HhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 709 LIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 709 l~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|+.+|+++||||||+|||+.+++.+.+.|+++++|+|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999998778999999999999999999999999999999999877653
No 311
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.8e-41 Score=349.50 Aligned_cols=219 Identities=28% Similarity=0.456 Sum_probs=194.2
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
++.+++++..|+. .==..+++|++||+++|+||+|||||||+++|+|.+.|.+|+|.|+|+|....+. .+|
T Consensus 1 ~l~L~~V~~~y~~--------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P-~~R 71 (231)
T COG3840 1 MLALDDVRFSYGH--------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPP-AER 71 (231)
T ss_pred CccccceEEeeCc--------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCc-ccC
Confidence 3568899999963 2235789999999999999999999999999999999999999999999865332 456
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPI 1622 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~v 1622 (1833)
-+++++|++.||..+||.+|+.+... .|+. ..+.+++++.++.++||..+.++.+.+||||||||+++||+|+++-+|
T Consensus 72 PVSmlFQEnNLFaHLtV~qNigLGl~-P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~Pi 150 (231)
T COG3840 72 PVSMLFQENNLFAHLTVAQNIGLGLS-PGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPI 150 (231)
T ss_pred ChhhhhhccccchhhhhhhhhcccCC-cccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCe
Confidence 69999999999999999999987432 2322 233456788899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1623 VILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1623 llLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
|+||||+++|||.-|.+|..++.+++.+++ .|++++||..+++.+++||++++++|||.+.|+.+++.+.
T Consensus 151 lLLDEPFsALdP~LR~eMl~Lv~~l~~E~~-~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 151 LLLDEPFSALDPALRAEMLALVSQLCDERK-MTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred EEecCchhhcCHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999987765 6999999999999999999999999999999999988764
No 312
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=394.93 Aligned_cols=221 Identities=28% Similarity=0.442 Sum_probs=199.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCc---ceEEEcCccCCc-cHHH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTT---GDALVFGKNITA-DMDE 633 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~---G~i~i~g~~i~~-~~~~ 633 (1833)
..|+++|+++.|++. .+.+++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.. ....
T Consensus 4 ~~l~i~~l~~~~~~~--~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~ 81 (282)
T PRK13640 4 NIVEFKHVSFTYPDS--KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWD 81 (282)
T ss_pred ceEEEEEEEEEcCCC--CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHH
Confidence 469999999999642 2359999999999999999999999999999999999999998 899999998854 3345
Q ss_pred hhcceEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 634 IRKGLGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 634 ~r~~ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
.++++|||||++. +++..||.||+.+.....+.+.++.++++.++++.+||.+..++++++||||||||++||+||+.+
T Consensus 82 ~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~ 161 (282)
T PRK13640 82 IREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVE 161 (282)
T ss_pred HHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcC
Confidence 6778999999984 677889999998876666777777778899999999999989999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|++|||||||+|||+.+++.++++|+++. + |+|||++||+++++. .|||+++|++|++++.|++.++.
T Consensus 162 P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 162 PKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999985 3 899999999999996 79999999999999999987764
No 313
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=394.11 Aligned_cols=222 Identities=26% Similarity=0.365 Sum_probs=199.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++||++.|++.. .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 4 ~l~~~~l~~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 4 ILEVENLVFKYEKES-DVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred eEEEEEEEEEcCCCC-cCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 589999999996421 2459999999999999999999999999999999999999999999999998853 34456788
Q ss_pred eEEEccCCC-CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDI-LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~-l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++. +++..||.||+.+.....+...++..++++++++.+||.+..++++.+||||||||++|||||+.+|++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~ll 162 (277)
T PRK13642 83 IGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEII 162 (277)
T ss_pred eEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 5677899999987665556666666778999999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||||+|||+.+++.++++|++++ + |+|||++||+++++. .||||++|++|++++.|++.++..
T Consensus 163 llDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 163 ILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999985 3 899999999999997 599999999999999999877754
No 314
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=388.63 Aligned_cols=220 Identities=26% Similarity=0.423 Sum_probs=195.9
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC--C---CcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~---~ 630 (1833)
.|+++|++|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .
T Consensus 4 ~l~~~nl~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 4 KVKLEQLNVHFGK----NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred EEEEEEEEEEeCC----eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 5899999999953 469999999999999999999999999999999999986 4 69999999998753 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||+||++.+++.+|+.||+.+.....+. +..+.++++.++++.+|+.. ..++.+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 345678899999999999999999999876554442 34455677899999999853 4578899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKIFT 236 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999877899999999999999999999999999999999887754
No 315
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=402.34 Aligned_cols=225 Identities=24% Similarity=0.325 Sum_probs=194.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC----CCcceEEEcCccCCc-cHH-
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP----PTTGDALVFGKNITA-DMD- 632 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~----p~~G~i~i~g~~i~~-~~~- 632 (1833)
.|+++||++.|+.+++.+.||+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. ...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999754445679999999999999999999999999999999999997 589999999998853 222
Q ss_pred --Hh-hcceEEEccCCC--CCCCCCHHHHHHHHHHh---cCC---CHHHHHHHHHHHHHHcCCCc---ccccccCCCChh
Q 000224 633 --EI-RKGLGVCPQYDI--LFPELTVREHLEMFAVL---KGV---KEELLESVVAEMVDEVGLAD---KVNIVVRALSGG 698 (1833)
Q Consensus 633 --~~-r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~---~~~---~~~~~~~~v~~~l~~~~L~~---~~~~~~~~LSgG 698 (1833)
.. ++.|||+||++. +.+.+||.+++...... .+. ...+.++++.++|+.+||.+ ..++.+++||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 22 357999999985 67889999999764321 121 22345678899999999975 358899999999
Q ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 699 MKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 699 qkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
|||||+|||||+.+|++|||||||+|||+.++++++++|+++++ |.|||++|||++++..+||||++|.+|++++.|+
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999863 8999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 000224 777 SLFLKHQ 783 (1833)
Q Consensus 777 ~~~Lk~~ 783 (1833)
+.++...
T Consensus 243 ~~~i~~~ 249 (330)
T PRK15093 243 SKELVTT 249 (330)
T ss_pred HHHHHhC
Confidence 9887554
No 316
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=405.40 Aligned_cols=214 Identities=21% Similarity=0.365 Sum_probs=190.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----h
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----P 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-----~ 1538 (1833)
||++ ||+|+|++ +. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... .
T Consensus 1 ~l~~-~l~k~~~~------~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~ 71 (352)
T PRK11144 1 MLEL-NFKQQLGD------LC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICL 71 (352)
T ss_pred CeEE-EEEEEeCC------EE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccc
Confidence 4677 99999963 22 3 89999999999999999999999999999999999999999999987531 2
Q ss_pred HHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1539 KAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1539 ~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
...++++||+||++.+++.+|++||+.+... ...++++.++++.++|.+..++++.+|||||||||+|||||+.
T Consensus 72 ~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 72 PPEKRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred chhhCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 2346789999999999999999999986432 1224567889999999988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhh
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~ 1693 (1833)
+|++|||||||+|||+.+++.+++.|+++.++.| +|||++|||++++..+|||+++|++|+++..|+++++.++
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREIN-IPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999865434 6899999999999999999999999999999999998765
No 317
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=387.64 Aligned_cols=219 Identities=29% Similarity=0.434 Sum_probs=195.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
+.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 78 (251)
T PRK14270 3 IKMESKNLNLWYGE----KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDV 78 (251)
T ss_pred cEEEEEEeEEEECC----eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccc
Confidence 46899999999953 4699999999999999999999999999999999999875 89999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++ +|++||+.+.....+. ...+.++++.++++.+|+. +..++.+.+||||||||++
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 157 (251)
T PRK14270 79 DVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLC 157 (251)
T ss_pred cHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 23456788999999999887 8999999987665554 3445567788999999884 3568889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++.
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 158 IARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 99999999999999999999999999999999999977799999999999999999999999999999999987764
No 318
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.7e-40 Score=385.41 Aligned_cols=218 Identities=27% Similarity=0.427 Sum_probs=197.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 i~i~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~-~~~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS----FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRV-HARDRKIG 75 (237)
T ss_pred CEEEEEEEEECC----eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcC-ChhhcCEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987532 23467899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
||||++.+|+.+|+.||+.+.....+.......++++++++.+++.+..++.+.+||||||||++||+||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLD 155 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999987766555555555678899999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||+|||+.+++.++++|+++++ |+|||++||+++++..+|||+++|++|++++.|+++++++
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 99999999999999999999853 8999999999999999999999999999999999888754
No 319
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=389.16 Aligned_cols=220 Identities=25% Similarity=0.400 Sum_probs=193.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+++++|++++|++ +.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 2 ~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (255)
T PRK11231 2 TLRTENLTVGYGT------KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLA 75 (255)
T ss_pred EEEEEeEEEEECC------EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHh
Confidence 5899999999952 469999999999999999999999999999999999999999999999998754 334556
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
+.+||+||++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++++.+|||||||||+||+||+.
T Consensus 76 ~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 76 RRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred hheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 789999999988888999999986421 1222223344567888999999888999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNT-QG-KTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 9999999999999999999999999999853 44 58999999999999999999999999999999887764
No 320
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=387.84 Aligned_cols=220 Identities=25% Similarity=0.419 Sum_probs=192.8
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~- 1536 (1833)
.+++++|++++|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD------FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC------ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 47999999999953 4589999999999999999999999999999999999997 58999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCC----ccccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDL----LKHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L----~~~~~~~~~~LSgG~kqr 1609 (1833)
.....+++|||+||++.+++ +|++||+.+.....+. .....++.+.++++.+++ .+..++++++||||||||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQR 158 (254)
T ss_pred cccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHH
Confidence 23346778999999988875 8999999886554443 233345667888888887 345788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-E-S-YTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 236 ~~~ 238 (254)
T PRK14273 236 LFF 238 (254)
T ss_pred HHh
Confidence 864
No 321
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.5e-41 Score=368.63 Aligned_cols=237 Identities=29% Similarity=0.437 Sum_probs=215.1
Q ss_pred eEEEEeeEEEecC-----------------CCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEE
Q 000224 559 CIQIRKLHKVYAT-----------------KRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDAL 621 (1833)
Q Consensus 559 ~i~i~~l~k~y~~-----------------~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~ 621 (1833)
+|.++||+|.|.- +.....||+|+||+|++|++++++|+|||||||++|||+|++.|++|.|.
T Consensus 3 ~i~~~~l~k~~~~~~k~pgl~g~l~~~~~~k~~~~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~ 82 (325)
T COG4586 3 MIMVENLSKNYPVAIKEPGLKGSLNHFFHRKERSIEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVR 82 (325)
T ss_pred eeEecccccccceeeeCchhHHHHHhhcCchhhhhhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEE
Confidence 4666677776642 11235699999999999999999999999999999999999999999999
Q ss_pred EcCccCCccHHHhhcceEEEc-cCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000224 622 VFGKNITADMDEIRKGLGVCP-QYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 700 (1833)
Q Consensus 622 i~g~~i~~~~~~~r~~ig~~~-Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqk 700 (1833)
|+|++...+.++.-+++|+|. |.-.+|.++-+.|.+.....++.++.++.+++.+.+.+.++|+...+.+++.||-|||
T Consensus 83 V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqR 162 (325)
T COG4586 83 VNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPALDSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQR 162 (325)
T ss_pred ecCcCcchhHHHHHHHHHHHhhhhheeeeechhhhhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHH
Confidence 999998776666667788875 7777888888999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH
Q 000224 701 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 778 (1833)
Q Consensus 701 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~ 778 (1833)
+|+.||.||+++|+||+|||||-|||..++..+.+.|+++. .+.||++|||+|+.+..+||||+.|+.|+++..|+..
T Consensus 163 mraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir~Flke~n~~~~aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l~ 242 (325)
T COG4586 163 MRAELAAALLHPPKVLFLDEPTVGLDVNAQANIREFLKEYNEERQATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTLA 242 (325)
T ss_pred HHHHHHHHhcCCCcEEEecCCccCcchhHHHHHHHHHHHHHHhhCceEEEEecchhhHHHhhhheEEeeCCcEeecccHH
Confidence 99999999999999999999999999999999999999985 4899999999999999999999999999999999999
Q ss_pred HHHhhhCCcEEEEEEec
Q 000224 779 FLKHQYGVGYTLTLVKS 795 (1833)
Q Consensus 779 ~Lk~~~g~gy~l~~~~~ 795 (1833)
.|+.+||..-.+.....
T Consensus 243 ~l~~~f~~~k~~~~el~ 259 (325)
T COG4586 243 QLQEQFGPYKEFSVELK 259 (325)
T ss_pred HHHHHhCCceEEEEEEc
Confidence 99999999877776554
No 322
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.1e-40 Score=381.86 Aligned_cols=189 Identities=24% Similarity=0.359 Sum_probs=152.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
.++-.+++|.|++ . .|+-=.=++..||++|++||||-||||+.++|+|.++|++|. ..+ -
T Consensus 342 lv~y~~~~k~~g~------F-~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~---------~ 401 (591)
T COG1245 342 LVEYPDLKKTYGD------F-KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED---------L 401 (591)
T ss_pred eeecchheeecCc------e-EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc---------c
Confidence 4556667777752 1 232223456789999999999999999999999999999998 222 2
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+|+|=||.-.-..+.||++.|.-...-. ..... .-.++++-++|++..++++.+||||+.|||+||.||..++++.
T Consensus 402 ~vSyKPQyI~~~~~gtV~~~l~~~~~~~-~~~s~---~~~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlY 477 (591)
T COG1245 402 KVSYKPQYISPDYDGTVEDLLRSAIRSA-FGSSY---FKTEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLY 477 (591)
T ss_pred eEeecceeecCCCCCcHHHHHHHhhhhh-cccch---hHHhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEE
Confidence 4899999754445689998776433221 22211 2346788899999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV 1677 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~ 1677 (1833)
+||||++.||.+.|-.+-+.|+++.... +.|.+++-||+-.+.-++||+++..
T Consensus 478 llDEPSA~LDvEqR~~vakvIRR~~e~~-~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 478 LLDEPSAYLDVEQRIIVAKVIRRFIENN-EKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred EecCchhhccHHHHHHHHHHHHHHHhhc-CceEEEEecceehhhhhhceEEEEe
Confidence 9999999999999999999999997655 4689999999999999999999885
No 323
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.7e-40 Score=387.36 Aligned_cols=225 Identities=24% Similarity=0.346 Sum_probs=193.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCC--CCCcceEEEcCccCCc-cHHH-hh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI--PPTTGDALVFGKNITA-DMDE-IR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~--~p~~G~i~i~g~~i~~-~~~~-~r 635 (1833)
|+++||+|.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+. +|++|+|.++|.++.. .... .+
T Consensus 1 l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR01978 1 LKIKDLHVSVED----KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERAR 76 (243)
T ss_pred CeEeeEEEEECC----EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhc
Confidence 468999999952 46999999999999999999999999999999999995 7999999999998753 2222 34
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHcCCC-cccccccC-CCChhHHHHHHHH
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKG-------VKEELLESVVAEMVDEVGLA-DKVNIVVR-ALSGGMKRKLSLG 706 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~-------~~~~~~~~~v~~~l~~~~L~-~~~~~~~~-~LSgGqkqrl~lA 706 (1833)
..++|+||++.+++.+|++|++.+...... .+..+..+++.++++.+||. +..++++. +|||||||||+||
T Consensus 77 ~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la 156 (243)
T TIGR01978 77 AGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEIL 156 (243)
T ss_pred cceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHH
Confidence 569999999999999999999987644321 12334557789999999997 45688887 5999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhh-cCEEEEeeCCEEEeecCHHHHHhhh
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEEL-GDRIAIMANGSLKCCGSSLFLKHQY 784 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l-~Dri~im~~G~l~~~G~~~~Lk~~~ 784 (1833)
|||+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+ |||+++|++|+++..|+++++..--
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 236 (243)
T TIGR01978 157 QMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAKELE 236 (243)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhcccc
Confidence 99999999999999999999999999999999986 589999999999999998 8999999999999999987665433
Q ss_pred CCcE
Q 000224 785 GVGY 788 (1833)
Q Consensus 785 g~gy 788 (1833)
..+|
T Consensus 237 ~~~~ 240 (243)
T TIGR01978 237 EKGY 240 (243)
T ss_pred ccCc
Confidence 3333
No 324
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.8e-40 Score=383.65 Aligned_cols=220 Identities=27% Similarity=0.435 Sum_probs=196.3
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++++|++ +.+++|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++.... ..++.
T Consensus 1 i~i~~l~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~-~~~~~ 73 (237)
T TIGR00968 1 IEIANISKRFGS------FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVH-ARDRK 73 (237)
T ss_pred CEEEEEEEEECC------eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCC-hhhcC
Confidence 468999999963 46999999999999999999999999999999999999999999999999885422 34678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|+.||+.+....++.......+.+.++++.+++.+..++.+.+||||||||++||+||+.+|++++
T Consensus 74 i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~lll 153 (237)
T TIGR00968 74 IGFVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLL 153 (237)
T ss_pred EEEEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999889999999876555554444445667889999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|||||+|||+.+++.+++.|++++++.+ +|||++||+++++..+|||+++|++|++++.|+++++++
T Consensus 154 lDEP~~~LD~~~~~~~~~~l~~~~~~~~-~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 154 LDEPFGALDAKVRKELRSWLRKLHDEVH-VTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999864324 689999999999999999999999999999999988864
No 325
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=388.73 Aligned_cols=222 Identities=25% Similarity=0.423 Sum_probs=193.9
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~ 1535 (1833)
.+..|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++.
T Consensus 16 ~~~~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~ 89 (267)
T PRK14235 16 TEIKMRARDVSVFYGE------KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIY 89 (267)
T ss_pred CCceEEEEeEEEEECC------EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECc
Confidence 3458999999999963 4599999999999999999999999999999999999975 8999999999985
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC--ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhH
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV--AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGN 1606 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~--~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~ 1606 (1833)
. .....++.+||+||++.+++. |+.||+.+....++. +..+..+++.++++.+++.+ ..++++.+|||||
T Consensus 90 ~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq 168 (267)
T PRK14235 90 DPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQ 168 (267)
T ss_pred ccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHH
Confidence 3 234567789999999888874 999999876554443 23334566788999999953 4678899999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||++|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + .|||++||++++++.+|||+++|++|++++.|+
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~-~-~-~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELR-Q-N-YTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHh-c-C-CeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 3 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
++++..
T Consensus 246 ~~~~~~ 251 (267)
T PRK14235 246 TEKMFT 251 (267)
T ss_pred HHHHHh
Confidence 988754
No 326
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=388.71 Aligned_cols=206 Identities=29% Similarity=0.420 Sum_probs=186.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..|+++||+++|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++ ...++.
T Consensus 11 ~~l~i~~l~~~~~~----~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~----~~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYGE----RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPL----AEARED 82 (257)
T ss_pred CcEEEEEEEEEECC----cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEH----HHhhCc
Confidence 46999999999953 4699999999999999999999999999999999999999999999998765 245678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+||++|++.+++.+||+||+.+... + ..++++.++++.+||.+..++++.+||||||||++|||||+.+|+++|
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~--~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLK--G----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhccc--c----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999998999999987421 1 134678899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCH
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 777 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~ 777 (1833)
|||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|++++.|+.
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 218 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTV 218 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeccc
Confidence 999999999999999999999973 489999999999999999999999999999987763
No 327
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=350.23 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=204.5
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc--------
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-------- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-------- 629 (1833)
..++++||.|+|+ ...+|+++|++-++|+++.|+|.+||||||++++|.=+..|+.|.|.++|.++..
T Consensus 5 ~~l~v~dlHK~~G----~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l 80 (256)
T COG4598 5 NALEVEDLHKRYG----EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQL 80 (256)
T ss_pred cceehhHHHhhcc----cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCe
Confidence 4699999999994 5579999999999999999999999999999999999999999999999988731
Q ss_pred ------cHHHhhcceEEEccCCCCCCCCCHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHH
Q 000224 630 ------DMDEIRKGLGVCPQYDILFPELTVREHLEM-FAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRK 702 (1833)
Q Consensus 630 ------~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~-~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqr 702 (1833)
....+|.++|+|+|+..||..|||.||+.- ....-|.++.+..++++.+|.++|+.++.+.++..|||||+||
T Consensus 81 ~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR 160 (256)
T COG4598 81 KPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQR 160 (256)
T ss_pred eeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHH
Confidence 235678899999999999999999999853 3455688999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 703 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 703 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
++|||||+.+|+++++|||||+|||+-.-++.+.++++. +|||++++||.|.+|..++.+++.+++|++-+.|+|+++.
T Consensus 161 ~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf 240 (256)
T COG4598 161 VAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVF 240 (256)
T ss_pred HHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHh
Confidence 999999999999999999999999999999999999996 5999999999999999999999999999999999997763
No 328
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.3e-40 Score=389.03 Aligned_cols=219 Identities=26% Similarity=0.402 Sum_probs=192.6
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
|+++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 2 l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (256)
T TIGR03873 2 LRLSRVSWSAGG------RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARAR 75 (256)
T ss_pred ceEEeEEEEECC------EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhh
Confidence 679999999953 469999999999999999999999999999999999999999999999998865 3345566
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHH-H---cCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYAR-I---KGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~-~---~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.+||+||++.+++.+|++||+.+... . .+....+..+++.++++.+++.+..++++.+||||||||++||+||+.+
T Consensus 76 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (256)
T TIGR03873 76 RVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQE 155 (256)
T ss_pred heEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 79999999877788999999987421 1 1222223345678899999998889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|+++||||||+|||+.+++.+++.|++++ ++| +|||++||+++++..+||||++|++|++++.|+++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 156 PKLLLLDEPTNHLDVRAQLETLALVRELA-ATG-VTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVL 225 (256)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHH-hcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhh
Confidence 99999999999999999999999999986 344 58999999999999999999999999999999988764
No 329
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=386.87 Aligned_cols=215 Identities=30% Similarity=0.442 Sum_probs=191.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....|+.
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 3 EIEFKEVSYSSFG----KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRK 78 (241)
T ss_pred eEEEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhc
Confidence 4889999999953 359999999999999999999999999999999999999999999999998753 34456778
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
+||+||++.+++ .|++||+.+....++ ..++++.++++.+||. +..++.+.+||||||||++|||||+.+|++|
T Consensus 79 i~~~~q~~~~~~-~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 153 (241)
T PRK14250 79 IGMVFQQPHLFE-GTVKDNIEYGPMLKG----EKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVL 153 (241)
T ss_pred EEEEecCchhch-hhHHHHHhcchhhcC----cHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998887 699999987544332 1235688899999997 5678999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||||+|||+.+++.+++.|++++ .|+|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 154 LLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 9999999999999999999999985 38999999999999999999999999999999999877643
No 330
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-40 Score=389.74 Aligned_cols=217 Identities=21% Similarity=0.327 Sum_probs=193.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 2 l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (256)
T TIGR03873 2 LRLSRVSWSAGG----RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRV 77 (256)
T ss_pred ceEEeEEEEECC----EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhhe
Confidence 789999999953 469999999999999999999999999999999999999999999999998754 334556789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHH-h---cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 639 GVCPQYDILFPELTVREHLEMFAV-L---KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~-~---~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
||+||++.+++.+||+||+.++.. . .+....+..+++.++++.+++.+..++.+.+||||||||++|||||+.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (256)
T TIGR03873 78 ALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQEPK 157 (256)
T ss_pred EEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 999999887788999999987531 1 122223345678999999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
++||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|+++..|++.++
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 158 LLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 999999999999999999999999986 489999999999999999999999999999999987665
No 331
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.5e-40 Score=377.97 Aligned_cols=212 Identities=22% Similarity=0.401 Sum_probs=185.4
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++|.|+. .++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|+++.... ..++.
T Consensus 1 ~~~~~l~~~~~~--------~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~ 71 (213)
T TIGR01277 1 LALDKVRYEYEH--------LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA-PYQRP 71 (213)
T ss_pred CeEEeeeEEeCC--------cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC-hhccc
Confidence 368999999952 467999999999999999999999999999999999999999999999886422 35678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.+............++++.++++.+++.+..++++.+||||||||++||+||+.+|+++|
T Consensus 72 i~~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lll 151 (213)
T TIGR01277 72 VSMLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILL 151 (213)
T ss_pred eEEEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999889999999764332111122234567889999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||||+|||+.+++.+++.|+++.++.+ +|||++||+++++..+|||+++|++|++++.|.
T Consensus 152 lDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 152 LDEPFSALDPLLREEMLALVKQLCSERQ-RTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999864434 689999999999999999999999999998874
No 332
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=389.95 Aligned_cols=221 Identities=24% Similarity=0.414 Sum_probs=193.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC---ceEEEEcCeeCCCC--
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT---DGTAFIFGKDIRSD-- 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~---~G~i~i~G~~i~~~-- 1537 (1833)
++|+++||++.|++ +.+++++||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...
T Consensus 3 ~~l~~~nl~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~ 76 (262)
T PRK09984 3 TIIRVEKLAKTFNQ------HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGR 76 (262)
T ss_pred cEEEEeeEEEEeCC------eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccc
Confidence 47999999999953 46999999999999999999999999999999999999987 49999999987531
Q ss_pred ----hHHhccceEEEecCCCCCCCCCHHHHHHHHHHH--------cCCChhhHHHHHHHHHHHcCCccccCCCCCCCChh
Q 000224 1538 ----PKAARRLIGYCPQFDALLEYLTVQEHLELYARI--------KGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGG 1605 (1833)
Q Consensus 1538 ----~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~--------~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG 1605 (1833)
....++++||+||++.+++.+|++||+.+.... .+....+.++++.++++.+++.+..++++.+||||
T Consensus 77 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 77 LARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred cchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 234567899999999999999999999764320 01112334567888999999988889999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1606 NKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1606 ~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||||+.+|+||||||||+|||+.+++.+++.|+++++++| +|||++||+++++..+|||+++|++|++++.|
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g 235 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDG-ITVVVTLHQVDYALRYCERIVALRQGHVFYDG 235 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999864444 68999999999999999999999999999999
Q ss_pred ChhHH
Q 000224 1686 SPQHL 1690 (1833)
Q Consensus 1686 ~~~~l 1690 (1833)
+++++
T Consensus 236 ~~~~~ 240 (262)
T PRK09984 236 SSQQF 240 (262)
T ss_pred CHHHh
Confidence 98775
No 333
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=389.79 Aligned_cols=218 Identities=26% Similarity=0.400 Sum_probs=193.7
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++++|++++|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++.
T Consensus 2 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (255)
T PRK11231 2 TLRTENLTVGYGT----KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARR 77 (255)
T ss_pred EEEEEeEEEEECC----EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhh
Confidence 4789999999953 469999999999999999999999999999999999999999999999988743 33455678
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHH----hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAV----LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~----~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
+||+||++.+++.+|+.||+.++.. ..+......+++++++++.+||.+..++++++||||||||++|||||+.+|
T Consensus 78 i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 78 LALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred eEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999988888999999987421 122222344567889999999998889999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 9999999999999999999999999985 589999999999999999999999999999998887655
No 334
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8.5e-41 Score=382.03 Aligned_cols=206 Identities=28% Similarity=0.456 Sum_probs=178.3
Q ss_pred EEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceE
Q 000224 1467 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIG 1546 (1833)
Q Consensus 1467 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ig 1546 (1833)
++|++|+|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++. ..++++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~----~~~~~i~ 71 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE----KERKRIG 71 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH----HHHhheE
Confidence 6899999953 45999999999999999999999999999999999999999999999998764 3567899
Q ss_pred EEecCCCCC--CCCCHHHHHHHHHHHcC----CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1547 YCPQFDALL--EYLTVQEHLELYARIKG----VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1547 ~~pQ~~~l~--~~lTv~e~l~~~~~~~g----~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
|+||++.++ ..+|++||+.+.....+ ......++++.++++.+++.+..++++.+||||||||++||+||+.+|
T Consensus 72 ~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p 151 (213)
T cd03235 72 YVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDP 151 (213)
T ss_pred EeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998763 23799999987533211 122334566788999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+|||+++|++| +++.|
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 152 DLLLLDEPFAGVDPKTQEDIYELLRELRR-EG-MTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999864 44 58999999999999999999999876 55543
No 335
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-40 Score=386.25 Aligned_cols=218 Identities=29% Similarity=0.486 Sum_probs=194.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 630 (1833)
.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.. +
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 3 KISVKDLDLFYGD----FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred eEEEEEEEEEECC----ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 4889999999953 3599999999999999999999999999999999999863 79999999998753 3
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||+||++.+++ +|++||+.+.....+. +.+..++++.++++.+++. +..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCI 157 (250)
T ss_pred hHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHH
Confidence 3456788999999998887 8999999987655554 3345667888999999874 35688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 158 ARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999977899999999999999999999999999999999987764
No 336
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=390.77 Aligned_cols=218 Identities=25% Similarity=0.378 Sum_probs=192.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..|+++||++.|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 12 ~~l~i~nl~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 12 IIISLQNVTISYGT----FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred ceEEEEeEEEEECC----EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 46999999999953 469999999999999999999999999999999999987 699999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
+....|+.+||+||++.+++. ||+||+.+.....+... ..++++.++++.+++. +..++++.+||||||||++|
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred CHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 344567889999999998884 99999998766555432 3456778889998874 45788999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeC-----------CEEEee
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMAN-----------GSLKCC 774 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~-----------G~l~~~ 774 (1833)
||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++ |++++.
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~ 245 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEF 245 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEe
Confidence 999999999999999999999999999999999998789999999999999999999999996 678888
Q ss_pred cCHHHHH
Q 000224 775 GSSLFLK 781 (1833)
Q Consensus 775 G~~~~Lk 781 (1833)
|++.++.
T Consensus 246 ~~~~~~~ 252 (269)
T PRK14259 246 NETKKIF 252 (269)
T ss_pred CCHHHHH
Confidence 9887764
No 337
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.4e-40 Score=404.70 Aligned_cols=215 Identities=20% Similarity=0.333 Sum_probs=190.2
Q ss_pred eEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----hHHhcc
Q 000224 1469 NLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-----PKAARR 1543 (1833)
Q Consensus 1469 ~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-----~~~~~~ 1543 (1833)
||+|+|++ +. + |+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....++
T Consensus 4 ~l~~~~~~------~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ 75 (354)
T TIGR02142 4 RFSKRLGD------FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKR 75 (354)
T ss_pred EEEEEECC------EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhC
Confidence 89999953 23 4 89999999999999999999999999999999999999999999988532 123567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
++||+||++.+++.+||+||+.+..... ...+.++++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 76 ~i~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~ll 153 (354)
T TIGR02142 76 RIGYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLL 153 (354)
T ss_pred CeEEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 8999999999999999999998754322 22334456888999999998999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
||||||+|||+.+++.+++.|++++++.| +|||++|||++++..+|||+++|++|++++.|+++++..+.
T Consensus 154 lLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 223 (354)
T TIGR02142 154 LMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASP 223 (354)
T ss_pred EEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCc
Confidence 99999999999999999999999865434 68999999999999999999999999999999999987543
No 338
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=391.14 Aligned_cols=220 Identities=20% Similarity=0.330 Sum_probs=194.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..|+++||+|+|++ +.+++|+||++.+||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 6 ~~l~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 6 ARLRGEQLTLGYGK----YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred cEEEEEEEEEEECC----EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 47999999999953 469999999999999999999999999999999999999999999999998753 3345567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHH-hcC---CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAV-LKG---VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~-~~~---~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
.+|||||++.+++.+|++||+.+... ..+ ...+..++++.++++.+||.+..++.+.+||||||||++|||||+.+
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~ 161 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQE 161 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcC
Confidence 89999999999888999999986421 111 11233456788999999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|+++||||||+|||+.+++.++++|+++. .|+|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 162 p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 162 TAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999985 3899999999999999999999999999999999887654
No 339
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-40 Score=385.47 Aligned_cols=220 Identities=28% Similarity=0.448 Sum_probs=194.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCC---CCC--CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGL---IPP--TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl---~~p--~~G~i~i~g~~i~~--- 629 (1833)
..++++|++|.|+. +.+++|+||++++||+++|+|+||||||||+++|+|+ .+| ++|+|.++|.++..
T Consensus 2 ~~l~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 77 (250)
T PRK14245 2 VKIDARDVNFWYGD----FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGV 77 (250)
T ss_pred cEEEEEEEEEEECC----EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccc
Confidence 36899999999953 4699999999999999999999999999999999997 465 59999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++ .|+.||+.+....++.. .+..+++++++++.+|+.+ ..++++.+||||||||++
T Consensus 78 ~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 156 (250)
T PRK14245 78 QVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLC 156 (250)
T ss_pred cHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHH
Confidence 23456788999999998887 59999998876555543 3345677899999999853 468889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 157 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 157 IARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999887753
No 340
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=404.59 Aligned_cols=211 Identities=25% Similarity=0.442 Sum_probs=189.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHHHh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDEI 634 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~~ 634 (1833)
|++ ||+|+|++ +. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....
T Consensus 2 l~~-~l~k~~~~----~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~ 74 (352)
T PRK11144 2 LEL-NFKQQLGD----LC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPE 74 (352)
T ss_pred eEE-EEEEEeCC----EE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchh
Confidence 566 99999953 22 3 8999999999999999999999999999999999999999999988753 12345
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
++++|||||++.+|+.+||+||+.+... ...+++++++++.+||.+..++++++||||||||++|||||+.+|+
T Consensus 75 ~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~ 148 (352)
T PRK11144 75 KRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAPE 148 (352)
T ss_pred hCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 6789999999999999999999987532 1235678999999999998999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
+|||||||+|||+.+++.+++.|+++. + |+|+|++|||++++..+||||++|++|+++..|++.++.+.
T Consensus 149 llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 149 LLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 999999999999999999999999985 3 89999999999999999999999999999999999888654
No 341
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.9e-41 Score=415.71 Aligned_cols=222 Identities=27% Similarity=0.454 Sum_probs=196.2
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
-.|+++||++.|+.++ +..+++|+||+|++||++||+||||+||||+.++|-.+|.|++|+|.+||+|+.. +....|+
T Consensus 464 G~IeF~~VsFaYP~Rp-~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~ 542 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTRP-DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRR 542 (716)
T ss_pred ceEEEEEeeeecCCCC-CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHH
Confidence 3699999999999875 6789999999999999999999999999999999999999999999999999974 7888999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHH-----HHHHHcCCCccccc----ccCCCChhHHHHHHHHH
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVA-----EMVDEVGLADKVNI----VVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~-----~~l~~~~L~~~~~~----~~~~LSgGqkqrl~lA~ 707 (1833)
+||+|.|+|+||.. |++|||.++.. ..+.+++++.++ +.+. ++++..|+ +..+||||||||+||||
T Consensus 543 ~Ig~V~QEPvLFs~-sI~eNI~YG~~--~~t~e~i~~AAk~ANah~FI~--~~p~gY~T~VGEkG~qLSGGQKQRIAIAR 617 (716)
T KOG0058|consen 543 KIGLVGQEPVLFSG-SIRENIAYGLD--NATDEEIEAAAKMANAHEFIT--NFPDGYNTVVGEKGSQLSGGQKQRIAIAR 617 (716)
T ss_pred Heeeeeccceeecc-cHHHHHhcCCC--CCCHHHHHHHHHHhChHHHHH--hCccccccccCCccccccchHHHHHHHHH
Confidence 99999999999976 99999998754 344444433222 2222 44555544 44589999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCC
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGV 786 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~ 786 (1833)
||+.||+||||||.||+||.++...+.+.|.+..++||||+|.|++..++. ||+|++|++|++++.|+.++|.++.++
T Consensus 618 ALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E~G~h~eLl~~~~g 695 (716)
T KOG0058|consen 618 ALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRH-ADQIVVIDKGRVVEMGTHDELLSKPNG 695 (716)
T ss_pred HHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhh-ccEEEEEcCCeEEecccHHHHhhCccc
Confidence 999999999999999999999999999999999999999999999999986 999999999999999999999887643
No 342
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=386.51 Aligned_cols=221 Identities=24% Similarity=0.395 Sum_probs=194.3
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~ 1536 (1833)
..+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 11 ~~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~ 84 (260)
T PRK10744 11 PSKIQVRNLNFYYGK------FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILT 84 (260)
T ss_pred CceEEEEEEEEEeCC------eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccc
Confidence 357999999999953 459999999999999999999999999999999999986 589999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc-CCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK-GVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~-g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
.....+++|||+||++.+++ .|++||+.+..... +.+.++..+++.++++.+++. +..++++.+|||||||
T Consensus 85 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 85 PKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred cccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHH
Confidence 23456788999999988887 89999998765443 445445556788899999974 4578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++||+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-Q-D-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 241 ~~~~ 244 (260)
T PRK10744 241 TIFT 244 (260)
T ss_pred HHHh
Confidence 8754
No 343
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=386.42 Aligned_cols=221 Identities=21% Similarity=0.400 Sum_probs=193.4
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~G~~i~~ 1536 (1833)
+++|+++|++|.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 10 ~~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~ 83 (259)
T PRK14274 10 QEVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILK 83 (259)
T ss_pred CceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccc
Confidence 468999999999953 459999999999999999999999999999999999987 3 69999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kq 1608 (1833)
.....++.+||+||++.+++. |++||+.+.....+. .+.+..+++.++++.+++.+ ..++++.+|||||||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 84 GKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred cccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHH
Confidence 234567789999999988875 999999876555553 23344556778899998853 468899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++||+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK-E-K-YTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999999999985 3 4 58999999999999999999999999999999999
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 240 ~~~~ 243 (259)
T PRK14274 240 KMFS 243 (259)
T ss_pred HHhh
Confidence 8764
No 344
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.3e-40 Score=404.85 Aligned_cols=214 Identities=22% Similarity=0.420 Sum_probs=191.2
Q ss_pred eeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc-----HHHhhcce
Q 000224 564 KLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD-----MDEIRKGL 638 (1833)
Q Consensus 564 ~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~-----~~~~r~~i 638 (1833)
||+|+|++ +. + |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....++.+
T Consensus 4 ~l~~~~~~----~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i 77 (354)
T TIGR02142 4 RFSKRLGD----FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRI 77 (354)
T ss_pred EEEEEECC----EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCe
Confidence 89999953 23 4 99999999999999999999999999999999999999999999987531 23456789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
||+||++.+|+.+||+||+.+..... ...+.+++++++++.+||.+..++++++|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllL 155 (354)
T TIGR02142 78 GYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLM 155 (354)
T ss_pred EEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999998865422 2334556789999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
||||+|||+.+++.+++.|++++ + |+|||++||+++++..+||||++|++|++++.|++.++.....
T Consensus 156 DEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 156 DEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 99999999999999999999985 3 8999999999999999999999999999999999988865443
No 345
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=385.33 Aligned_cols=220 Identities=30% Similarity=0.460 Sum_probs=194.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCC--CC---CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLI--PP---TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~--~p---~~G~i~i~g~~i~~--- 629 (1833)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+. +| ++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14239 4 PILQVSDLSVYYNK----KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRT 79 (252)
T ss_pred ceEEEEeeEEEECC----eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCccc
Confidence 36899999999953 36999999999999999999999999999999999995 46 59999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+.+||+||++.+++ +|++||+.+.....+.. .+..++++.++++.+++. +..++.+++||||||||++
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 158 (252)
T PRK14239 80 DTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVC 158 (252)
T ss_pred chHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHH
Confidence 23345778999999998887 79999999876555543 334567788899999874 3568899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|++++.|++.++.+
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 159 IARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999998777999999999999999999999999999999999877643
No 346
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.1e-40 Score=380.02 Aligned_cols=208 Identities=33% Similarity=0.569 Sum_probs=188.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|++|.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... .++.+|
T Consensus 1 l~l~~v~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK----QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---DLHKIG 73 (223)
T ss_pred CEEEeEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---ccccEE
Confidence 468999999953 4699999999999999999999999999999999999999999999999876421 135799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.++....+.+ ++++.++++.+|+.+..++.+.+||||||||++||||++.+|+++|||
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~llllD 149 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILD 149 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999999999999999998876655533 346788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 778 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~ 778 (1833)
|||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.
T Consensus 150 EP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 150 EPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 9999999999999999999986 5899999999999999999999999999999988763
No 347
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=382.22 Aligned_cols=216 Identities=23% Similarity=0.394 Sum_probs=189.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|+. + ..|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ..++.+|
T Consensus 2 l~~~~l~~~~~~----~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH----L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTP-PSRRPVS 74 (232)
T ss_pred eEEEEEEEEECC----c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCC-hhhccEE
Confidence 789999999953 1 23899999999999999999999999999999999999999999999875321 2356799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|+.||+.+.........+..++++.++++.+||.+..++++++||||||||++||||++.+|+++|||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLD 154 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLD 154 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999986532111112334667899999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||+|||+.+++.++++|+++. + |+|||++||+++++..+|||+++|++|++.+.|++.++.+
T Consensus 155 EP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 155 EPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999984 3 8999999999999999999999999999999999877653
No 348
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=384.53 Aligned_cols=219 Identities=28% Similarity=0.473 Sum_probs=194.9
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~---~ 630 (1833)
.|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~ 78 (250)
T PRK14262 3 IIEIENFSAYYGE----KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLD 78 (250)
T ss_pred eEEEEeeEEEeCC----ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhh
Confidence 5899999999953 4699999999999999999999999999999999999984 89999999998753 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
....++.+||+||++.+++ .|++||+.+.....+.. .+..+++++++++.+|+.+ ..++.+.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 157 (250)
T PRK14262 79 VTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCI 157 (250)
T ss_pred HHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHH
Confidence 2345778999999999887 89999998876554433 3345667889999999863 4688999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 158 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14262 158 ARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVE 234 (250)
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999999999999878999999999999999999999999999999999887754
No 349
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-40 Score=376.63 Aligned_cols=205 Identities=30% Similarity=0.431 Sum_probs=180.6
Q ss_pred eEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-----ChHHhcc
Q 000224 1469 NLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-----DPKAARR 1543 (1833)
Q Consensus 1469 ~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-----~~~~~~~ 1543 (1833)
||+|+|++ +.+ |+||+|++ |++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 5 ~l~~~~~~------~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 5 DIEKRLPD------FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred eeeEecCC------eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 89999963 333 99999999 9999999999999999999999999999999999998753 1223567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
.+||+||++.+++.+|++||+.+..... .....++++.++++.+++.+..++++.+||||||||++||+||+.+|++|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 153 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELL 153 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8999999999998899999998764322 22234456788999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
||||||+|||+.+++.+++.|++++++.| +|||++||++++++.+|||+++|++|++++.|
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 154 LLDEPFSALDRALRLQLLPELKQIKKNLN-IPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999865434 58999999999999999999999999998765
No 350
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-40 Score=383.31 Aligned_cols=221 Identities=24% Similarity=0.396 Sum_probs=193.1
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~G~~i~~- 1536 (1833)
..|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 3 ~~l~~~nl~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~ 76 (252)
T PRK14256 3 NKVKLEQLNVHFGK------NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDR 76 (252)
T ss_pred cEEEEEEEEEEeCC------eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccc
Confidence 36899999999952 459999999999999999999999999999999999986 4 69999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqr 1609 (1833)
.....++.+||+||++.+++.+|++||+.+.....+. ...+.++++.++++.+++.. ..++.+.+||||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14256 77 GVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQR 156 (252)
T ss_pred cCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHH
Confidence 2335677899999999999989999999875544442 23344566788899999853 4678899999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++||+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 157 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 157 LCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELK-E-K-YTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-h-C-CcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999995 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+..
T Consensus 234 ~~~ 236 (252)
T PRK14256 234 IFT 236 (252)
T ss_pred HHh
Confidence 764
No 351
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.4e-40 Score=376.92 Aligned_cols=210 Identities=26% Similarity=0.449 Sum_probs=186.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...++.+|
T Consensus 1 ~~~~~l~~~~~~------~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH------LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGL-APYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC------cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccC-ChhccceE
Confidence 368999999941 46899999999999999999999999999999999999999999999987532 23567899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|+.||+.+............+++++++++.+||.+..++.+++||||||||++|||||+.+|+++|||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 153 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLD 153 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999986543211112234567889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
|||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|++++.|.
T Consensus 154 EPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 154 EPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999985 3 8999999999999999999999999999998764
No 352
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=387.37 Aligned_cols=220 Identities=26% Similarity=0.429 Sum_probs=193.3
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 20 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 20 HILEVKDLSIYYGE----KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred ceEEEEEEEEEeCC----ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999864 799999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++++||+||++.+++. |++||+.+.....+.. ....++.+.++++.+++. +..++++++||||||||++
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~ 174 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLC 174 (268)
T ss_pred cHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHH
Confidence 233467789999999998885 9999998765443332 233456788899999884 4468899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 175 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 175 IARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999778999999999999999999999999999999999877643
No 353
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=388.52 Aligned_cols=219 Identities=27% Similarity=0.400 Sum_probs=193.5
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC---cceEEEcCccCCc-----
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT---TGDALVFGKNITA----- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~---~G~i~i~g~~i~~----- 629 (1833)
..|+++||++.|++ +.+++|+||++.+||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~ 78 (262)
T PRK09984 3 TIIRVEKLAKTFNQ----HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLA 78 (262)
T ss_pred cEEEEeeEEEEeCC----eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccc
Confidence 36899999999953 46999999999999999999999999999999999999987 4999999998743
Q ss_pred -cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHh--------cCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHH
Q 000224 630 -DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVL--------KGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMK 700 (1833)
Q Consensus 630 -~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~--------~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqk 700 (1833)
.....++.+||+||++.+++.+|+.||+.+.... .+...++.+++++++++.+|+.+..++.+.+||||||
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 79 RDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred hhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHH
Confidence 2244577899999999999999999999875321 1111234466889999999999888999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH
Q 000224 701 RKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 778 (1833)
Q Consensus 701 qrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~ 778 (1833)
||++|||||+.+|++|||||||+|||+.+++.++++|++++ +|+|||++||+++++..+||||++|++|++.+.|++.
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999985 3899999999999999999999999999999999876
Q ss_pred HH
Q 000224 779 FL 780 (1833)
Q Consensus 779 ~L 780 (1833)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 54
No 354
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=377.98 Aligned_cols=232 Identities=24% Similarity=0.395 Sum_probs=201.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-C----CceEEEEcCeeCCCC-
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-P----TDGTAFIFGKDIRSD- 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-p----~~G~i~i~G~~i~~~- 1537 (1833)
+|+++||+..|.... +...||+||||+|++||++||+|.+|||||||.+.|+|+++ | .+|+|.++|+++.+-
T Consensus 1 lL~v~nL~v~f~~~~--g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~ 78 (316)
T COG0444 1 LLEVKNLSVSFPTDA--GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLS 78 (316)
T ss_pred CceEeeeEEEEecCC--ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCC
Confidence 378999999997532 34679999999999999999999999999999999999998 4 579999999988653
Q ss_pred hH---Hh-ccceEEEecCC--CCCCCCCHHHHHHHHHHHcC-C-ChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhH
Q 000224 1538 PK---AA-RRLIGYCPQFD--ALLEYLTVQEHLELYARIKG-V-AEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGN 1606 (1833)
Q Consensus 1538 ~~---~~-~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g-~-~~~~~~~~~~~~l~~~~L~~---~~~~~~~~LSgG~ 1606 (1833)
.+ ++ .+.|+|+||++ +|.|-+|+.+.+.-..+.++ . .+++..+++.++|+.+|+.+ ..+.++.+|||||
T Consensus 79 ~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGM 158 (316)
T COG0444 79 EKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGM 158 (316)
T ss_pred HHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcH
Confidence 22 22 35799999995 78899999998876666443 3 45667788999999999974 5789999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
||||.||+||+.+|++||.||||++||...+.++.++|++++++.| +|+|++|||+..+..+||||+||..|++++.|+
T Consensus 159 rQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~-~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 159 RQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKG-TALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred HHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 9999999999999999999999999999999999999999986554 799999999999999999999999999999999
Q ss_pred hhHHHhhcCCeE
Q 000224 1687 PQHLKTRFGNFL 1698 (1833)
Q Consensus 1687 ~~~l~~~~~~~~ 1698 (1833)
.+++...-..-|
T Consensus 238 ~~~i~~~P~HPY 249 (316)
T COG0444 238 VEEIFKNPKHPY 249 (316)
T ss_pred HHHHhcCCCChH
Confidence 999876544333
No 355
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=384.92 Aligned_cols=220 Identities=25% Similarity=0.451 Sum_probs=193.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~-- 1536 (1833)
+++++|++|+|++ +.+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 4 ~l~i~~v~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~ 77 (258)
T PRK14241 4 RIDVKDLNIYYGS------FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPG 77 (258)
T ss_pred cEEEeeEEEEECC------EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccc
Confidence 6899999999963 4599999999999999999999999999999999999974 79999999998742
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++.+||++|++.+++.+|++||+.+....++. +....++.+.++++.+++. +..++++.+|||||||||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 157 (258)
T PRK14241 78 VDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRL 157 (258)
T ss_pred cChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHH
Confidence 2345677899999999999989999999876655443 3344556778889999884 467889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE------CCEEEEe
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV------GGQLRCI 1684 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~------~G~i~~~ 1684 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|+ +|++++.
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 158 CIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK-Q-D-YTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 99999999999999999999999999999999999984 3 3 589999999999999999999997 7999999
Q ss_pred cChhHHHh
Q 000224 1685 GSPQHLKT 1692 (1833)
Q Consensus 1685 g~~~~l~~ 1692 (1833)
|+++++.+
T Consensus 235 ~~~~~~~~ 242 (258)
T PRK14241 235 DDTEKIFS 242 (258)
T ss_pred CCHHHHHh
Confidence 99988754
No 356
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=9.4e-40 Score=384.24 Aligned_cols=223 Identities=22% Similarity=0.365 Sum_probs=192.0
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCee-----CCCC
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKD-----IRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~-----i~~~ 1537 (1833)
.+|+++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.+ +...
T Consensus 5 ~~l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~ 78 (258)
T PRK11701 5 PLLSVRGLTKLYGP------RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYAL 78 (258)
T ss_pred ceEEEeeeEEEcCC------ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccC
Confidence 47999999999953 459999999999999999999999999999999999999999999999998 6432
Q ss_pred -hHH----hccceEEEecCC--CCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHH
Q 000224 1538 -PKA----ARRLIGYCPQFD--ALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1538 -~~~----~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kq 1608 (1833)
... .++.+||+||++ .+++.+|+.||+.+.....+. ...+.++.+.++++.+++. +..++++.+|||||||
T Consensus 79 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 79 SEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred CHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 222 356799999996 466778999998754322221 2233456678899999997 4788999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++++.| .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 237 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELG-LAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTD 237 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999865434 68999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 238 ~~~~ 241 (258)
T PRK11701 238 QVLD 241 (258)
T ss_pred HHhc
Confidence 8754
No 357
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=384.27 Aligned_cols=219 Identities=30% Similarity=0.461 Sum_probs=194.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~ 630 (1833)
.|+++|+++.|+. +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~ 79 (251)
T PRK14251 4 IISAKDVHLSYGN----YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMD 79 (251)
T ss_pred eEEEEeeEEEECC----eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccch
Confidence 5899999999953 469999999999999999999999999999999999997 489999999998742 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....++.+||++|++.+++ .||+||+.+.....+.. .+..++++.++++.+++. +..++.+.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 158 (251)
T PRK14251 80 LVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICI 158 (251)
T ss_pred HHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHH
Confidence 3456788999999998886 79999998765554443 334567788999999984 45688999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|+++||||||+|||+.+++.+++.|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14251 159 ARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFI 235 (251)
T ss_pred HHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999778999999999999999999999999999999999877643
No 358
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-40 Score=382.89 Aligned_cols=221 Identities=22% Similarity=0.396 Sum_probs=193.5
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~ 1536 (1833)
+++++++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 2 ~~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~ 75 (251)
T PRK14270 2 KIKMESKNLNLWYGE------KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYD 75 (251)
T ss_pred ccEEEEEEeEEEECC------eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccc
Confidence 357999999999952 4599999999999999999999999999999999999875 89999999999853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
.....++.+||+||++.+++ +|++||+.+.....+.. ..+..+++.++++.+++. +..++++.+|||||||
T Consensus 76 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 76 KDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQ 154 (251)
T ss_pred ccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHH
Confidence 22345778999999998887 89999998766555542 334455677889999874 4578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++||+||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~-~-~-~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 231 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELK-K-E-YTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTE 231 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHH-h-C-CeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHH
Confidence 9999999999999999999999999999999999999985 3 3 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++..
T Consensus 232 ~~~~ 235 (251)
T PRK14270 232 KIFL 235 (251)
T ss_pred HHhc
Confidence 8753
No 359
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-40 Score=386.73 Aligned_cols=220 Identities=25% Similarity=0.434 Sum_probs=191.1
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~ 1536 (1833)
..+|+++|++++|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 11 ~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 357999999999953 469999999999999999999999999999999999987 699999999998742
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
+....++++||+||++.+++ .|++||+.+.....+... ..++.+.++++.+++. +..++++.+||||||||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred ccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHH
Confidence 34456778999999998887 599999988765555432 2345567788888763 45788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-----------
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG----------- 1678 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~----------- 1678 (1833)
|+|||||+.+|++|||||||+|||+.+++.++++|++++ + + .|||++||++++++.+|||+++|++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK-K-N-FTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 999999999999999999999999999999999999984 3 4 5899999999999999999999996
Q ss_pred CEEEEecChhHHHh
Q 000224 1679 GQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1679 G~i~~~g~~~~l~~ 1692 (1833)
|++++.|+++++.+
T Consensus 240 g~~~~~~~~~~~~~ 253 (269)
T PRK14259 240 GYLVEFNETKKIFN 253 (269)
T ss_pred ceEEEeCCHHHHHh
Confidence 67899999888754
No 360
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=381.87 Aligned_cols=219 Identities=25% Similarity=0.432 Sum_probs=192.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCC-ChH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRS-DPK 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~---p~~G~i~i~G~~i~~-~~~ 1539 (1833)
+++++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++ |++|+|.++|+++.. ...
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4789999999963 469999999999999999999999999999999999974 799999999999865 334
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC--hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHHHHH
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA--EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKLSVA 1613 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~--~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl~lA 1613 (1833)
..++.|||+||++.+++ .|++||+.+....++.. ....++++.++++.+++. +..++++.+||||||||++||
T Consensus 76 ~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred HHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHH
Confidence 56778999999998887 69999998866554432 233445677889999995 346888999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1614 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1614 ~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|||+.+|++|||||||+|||+.+++.+.+.|+++. + + +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELS-H-N-LSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-C-C-CEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999984 3 4 589999999999999999999999999999999988764
No 361
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.1e-40 Score=377.58 Aligned_cols=210 Identities=35% Similarity=0.539 Sum_probs=188.0
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
++++|++|.|++ +.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... .++.
T Consensus 1 l~l~~v~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~~~~ 71 (223)
T TIGR03740 1 LETKNLSKRFGK------QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---DLHK 71 (223)
T ss_pred CEEEeEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---cccc
Confidence 468999999952 4699999999999999999999999999999999999999999999999987532 1357
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
+||+||++.+++.+|++||+.++....+.+ ++.+.++++.+++.+..++++.+||||||||++||+|++.+|++|+
T Consensus 72 ~~~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~lll 147 (223)
T TIGR03740 72 IGSLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLI 147 (223)
T ss_pred EEEEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998888899999998876655433 2456788999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
|||||+|||+.+++.+++.|+++++ +| .|||++||+++++..+|||+++|++|++++.|++.+
T Consensus 148 lDEP~~~LD~~~~~~l~~~L~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 148 LDEPTNGLDPIGIQELRELIRSFPE-QG-ITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred ECCCccCCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999863 44 589999999999999999999999999999998653
No 362
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-40 Score=376.09 Aligned_cols=203 Identities=31% Similarity=0.467 Sum_probs=181.6
Q ss_pred eeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-----cHHHhhcce
Q 000224 564 KLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-----DMDEIRKGL 638 (1833)
Q Consensus 564 ~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-----~~~~~r~~i 638 (1833)
||+|+|++ +.+ |+||++++ |+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 5 ~l~~~~~~----~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 5 DIEKRLPD----FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred eeeEecCC----eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 89999954 234 99999999 9999999999999999999999999999999999988742 223457789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVIL 718 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliL 718 (1833)
||+||++.+++.+|+.||+.+..... .....++++.++++.+|+.+..++++.+||||||||++||+||+.+|+++||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 155 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLL 155 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999998765322 3334566789999999999888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 719 DEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 719 DEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
||||+|||+.+++.++++|++++ + |+|||++||++++++.+|||+++|++|++++.|
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999985 3 899999999999999999999999999998765
No 363
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=385.16 Aligned_cols=220 Identities=26% Similarity=0.393 Sum_probs=195.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..|+++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 19 ~~l~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 19 IALSTKDLHVYYGK----KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred eEEEEeeEEEEECC----eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 47999999999943 469999999999999999999999999999999999996 589999999998842
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++ .||+||+.+.....+. .++..++++.++++.++|. +..++++++||||||||++
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl~ 173 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRLC 173 (267)
T ss_pred ChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHHH
Confidence 23456788999999998887 5999999886554443 3445667888999999985 3568899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++++.++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 174 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 174 IARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999877643
No 364
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=382.35 Aligned_cols=220 Identities=26% Similarity=0.397 Sum_probs=194.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC-----cceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~--- 629 (1833)
..++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~----~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~ 78 (251)
T PRK14249 3 PKIKIRGVNFFYHK----HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNL 78 (251)
T ss_pred ceEEEEEEEEEECC----eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEcccccc
Confidence 36899999999953 45999999999999999999999999999999999999997 6999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+.+||+||++.+++. |++||+.+....++.. .++.+++++++++.+++. +..++.+.+||||||||++
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~ 157 (251)
T PRK14249 79 DVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLC 157 (251)
T ss_pred ChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 234567889999999998875 9999999876555543 234556788888888874 4568899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 158 IARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999778999999999999999999999999999999999877754
No 365
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=383.16 Aligned_cols=221 Identities=28% Similarity=0.408 Sum_probs=195.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcC------ccCCc-c
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG------KNITA-D 630 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g------~~i~~-~ 630 (1833)
+.+.++|++|+|++ +.+++|+||++.+||+++|+|+||||||||+++|+|+++|++|+|.++| .++.. .
T Consensus 9 ~~i~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~ 84 (257)
T PRK14246 9 DVFNISRLYLYIND----KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQID 84 (257)
T ss_pred hheeeeeEEEecCC----ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCC
Confidence 57999999999953 4699999999999999999999999999999999999999997777665 44432 3
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||+||++.+++.+|++||+.+....++. ++++.++++.++++.+++. +..++.+..||||||||++|
T Consensus 85 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 164 (257)
T PRK14246 85 AIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTI 164 (257)
T ss_pred HHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHH
Confidence 345678899999999999999999999987655443 3455667889999999996 35688999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|+++||||||+|||+.++++++++|.++++++|||++||+++++..+|||+++|++|++++.|++.++.+
T Consensus 165 aral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~ 241 (257)
T PRK14246 165 ARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFT 241 (257)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999999778999999999999999999999999999999999877653
No 366
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-40 Score=388.69 Aligned_cols=220 Identities=25% Similarity=0.393 Sum_probs=194.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
+.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 38 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~ 113 (286)
T PRK14275 38 PHVVAKNFSIYYGE----FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFT 113 (286)
T ss_pred eEEEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhccc
Confidence 56999999999953 359999999999999999999999999999999999864 599999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
.....|+.+||+||++.+++. ||.||+.+.....+.. ....++++.++++.+|+. +..++++.+||||||||++
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 192 (286)
T PRK14275 114 DEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLC 192 (286)
T ss_pred chHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHH
Confidence 223467889999999988875 9999999876555543 334566788899999873 4668899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 193 LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~~ 270 (286)
T PRK14275 193 VARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLFT 270 (286)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999999999999777999999999999999999999999999999999887754
No 367
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=384.06 Aligned_cols=222 Identities=24% Similarity=0.410 Sum_probs=191.5
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~ 1535 (1833)
.+++++++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++.
T Consensus 18 ~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~ 91 (268)
T PRK14248 18 KEHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNIL 91 (268)
T ss_pred CCceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcc
Confidence 4468999999999953 459999999999999999999999999999999999865 79999999999885
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHH
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~k 1607 (1833)
. .....++++||+||++.+++. |++||+.+.....+... ...++.+.+.++.+++. +..++++++||||||
T Consensus 92 ~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 92 DSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred cccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHH
Confidence 3 223457789999999988874 99999987644433322 22345567788888874 456889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
||++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 247 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELK-E-E-YSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQT 247 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHh-c-C-CEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999984 3 3 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000224 1688 QHLKT 1692 (1833)
Q Consensus 1688 ~~l~~ 1692 (1833)
+++.+
T Consensus 248 ~~~~~ 252 (268)
T PRK14248 248 EQIFT 252 (268)
T ss_pred HHHHh
Confidence 88764
No 368
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=387.36 Aligned_cols=219 Identities=25% Similarity=0.410 Sum_probs=194.3
Q ss_pred cceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc--
Q 000224 557 GRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA-- 629 (1833)
Q Consensus 557 ~~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~-- 629 (1833)
++.|+++||++.|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 37 ~~~l~i~~l~~~~~~----~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~ 112 (285)
T PRK14254 37 ETVIEARDLNVFYGD----EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDAD 112 (285)
T ss_pred CceEEEEEEEEEECC----EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccc
Confidence 357999999999953 469999999999999999999999999999999999997 699999999998742
Q ss_pred -cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 -DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 -~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++. ||.||+.+.....+.+. ..+++++++++.+||. +..++++.+||||||||++
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 113 VDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred cchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHH
Confidence 234567889999999988885 99999988766655543 4567889999999985 4568899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEE-EeeCCEEEeecCHHHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIA-IMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~-im~~G~l~~~G~~~~Lk 781 (1833)
|||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||++ +|++|+++..|++.++.
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999767899999999999999999976 57999999999887764
No 369
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.9e-40 Score=381.03 Aligned_cols=219 Identities=21% Similarity=0.309 Sum_probs=188.5
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CCCceEEEEcCeeCCCC-hHH-
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YPTDGTAFIFGKDIRSD-PKA- 1540 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~--~p~~G~i~i~G~~i~~~-~~~- 1540 (1833)
|+++||+|+|++ +.+++|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|+++... ...
T Consensus 1 l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 74 (243)
T TIGR01978 1 LKIKDLHVSVED------KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDER 74 (243)
T ss_pred CeEeeEEEEECC------EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHh
Confidence 468999999952 46999999999999999999999999999999999995 79999999999988642 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcC-------CChhhHHHHHHHHHHHcCCc-cccCCCCC-CCChhHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKG-------VAEYRMDDVVMEKLVEFDLL-KHAKKPSF-TLSGGNKRKLS 1611 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-------~~~~~~~~~~~~~l~~~~L~-~~~~~~~~-~LSgG~kqrl~ 1611 (1833)
.+..++|+||++.+++.+|++|++.+...... ....+..+.+.++++.++|. +..++++. +|||||||||+
T Consensus 75 ~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~ 154 (243)
T TIGR01978 75 ARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNE 154 (243)
T ss_pred hccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHH
Confidence 34559999999999999999999987543221 12223345678899999997 46788887 59999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHH-cCEEEEEECCEEEEecChhHH
Q 000224 1612 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQAL-CTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1612 lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l-~drv~im~~G~i~~~g~~~~l 1690 (1833)
||+||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++||++++++.+ |||+++|++|++++.|+++++
T Consensus 155 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (243)
T TIGR01978 155 ILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELA 232 (243)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHh
Confidence 99999999999999999999999999999999999863 44 5899999999999998 899999999999999998865
Q ss_pred H
Q 000224 1691 K 1691 (1833)
Q Consensus 1691 ~ 1691 (1833)
.
T Consensus 233 ~ 233 (243)
T TIGR01978 233 K 233 (243)
T ss_pred c
Confidence 5
No 370
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=382.30 Aligned_cols=220 Identities=26% Similarity=0.396 Sum_probs=194.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC-----cceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~---~ 630 (1833)
.++++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. +
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (252)
T PRK14272 4 LLSAQDVNIYYGD----KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVD 79 (252)
T ss_pred EEEEeeeEEEECC----EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccC
Confidence 5899999999952 46999999999999999999999999999999999999875 8999999998752 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....|+.+||+||++.+++.+|+.||+.+.....+. ..++..+.+.++++.+++. +..++++++||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14272 80 PVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCI 159 (252)
T ss_pred HHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHH
Confidence 335677899999999999999999999876544443 2344566777888888763 45688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++..
T Consensus 160 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 160 ARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999878999999999999999999999999999999999887754
No 371
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=382.79 Aligned_cols=220 Identities=26% Similarity=0.430 Sum_probs=194.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC--C---CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 629 (1833)
..|+++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 5 ~~i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 80 (253)
T PRK14261 5 IILSTKNLNLWYGE----KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGA 80 (253)
T ss_pred ceEEEeeeEEEECC----eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999976 3 58999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++. ||+||+.+....++. .....++++.++++.+++. +..++.+.+||||||||++
T Consensus 81 ~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14261 81 DVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLC 159 (253)
T ss_pred chhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHH
Confidence 234567889999999998885 999999987666553 2334566788899999884 3468899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+++||||||+|||+.++++++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 160 laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14261 160 IARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFE 237 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHh
Confidence 999999999999999999999999999999999999877999999999999999999999999999999999877753
No 372
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=381.24 Aligned_cols=220 Identities=25% Similarity=0.434 Sum_probs=191.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CC---CceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YP---TDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~--~p---~~G~i~i~G~~i~~- 1536 (1833)
++++++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+. +| ++|+|.++|+++..
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~ 77 (252)
T PRK14239 4 PILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSP 77 (252)
T ss_pred ceEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCc
Confidence 47999999999953 45999999999999999999999999999999999985 46 59999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
.....++.+||+||++.+++ +|++||+.+.....+... ...++.+.++++.+++. +..++++.+||||||||
T Consensus 78 ~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 78 RTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred ccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 22345678999999998887 899999987655555432 23456677888898874 35688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++||+||+.+|++|||||||+|||+.+++.++++|+++. + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLK-D-D-YTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHh-h-C-CeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 234 ~~~ 236 (252)
T PRK14239 234 MFM 236 (252)
T ss_pred HHh
Confidence 754
No 373
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=380.51 Aligned_cols=220 Identities=24% Similarity=0.392 Sum_probs=191.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCC---CCC--CceEEEEcCeeCCCC
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGE---EYP--TDGTAFIFGKDIRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl---~~p--~~G~i~i~G~~i~~~ 1537 (1833)
++++++|++|.|+. +.+++|+||+|++||++||+||||||||||+++|+|+ .+| ++|+|.++|+++...
T Consensus 2 ~~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~ 75 (250)
T PRK14245 2 VKIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDK 75 (250)
T ss_pred cEEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccc
Confidence 47899999999953 4599999999999999999999999999999999997 455 589999999988542
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHH
Q 000224 1538 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1538 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqr 1609 (1833)
....++.+||+||++.+++ .|+.||+.+....++... ...++.+.++++.+++.+ ..++++.+||||||||
T Consensus 76 ~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 76 GVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred cccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 2456778999999988887 699999987655554432 234566788899999853 4688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-K-D-YTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999998
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 232 ~~~ 234 (250)
T PRK14245 232 IFT 234 (250)
T ss_pred Hhc
Confidence 864
No 374
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=381.41 Aligned_cols=218 Identities=28% Similarity=0.442 Sum_probs=193.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc--cH
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--DM 631 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--~~ 631 (1833)
.++++|++|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. +.
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 78 (249)
T PRK14253 3 KFNIENLDLFYGE----NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDV 78 (249)
T ss_pred eEEEeccEEEECC----eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccch
Confidence 4889999999953 4699999999999999999999999999999999999986 59999999998742 34
Q ss_pred HHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHHH
Q 000224 632 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSLG 706 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~lA 706 (1833)
...|+.+||+||++.+++ .||.||+.+.....+.. .+..++++.++++.+++. +..++++.+||||||||++||
T Consensus 79 ~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 157 (249)
T PRK14253 79 ADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIA 157 (249)
T ss_pred HHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHH
Confidence 566788999999999887 79999998765444433 344567788899999875 356788999999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|+++..|++..+.
T Consensus 158 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 158 RTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999977799999999999999999999999999999999887664
No 375
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.9e-40 Score=402.42 Aligned_cols=230 Identities=28% Similarity=0.462 Sum_probs=205.4
Q ss_pred cceEEEEeeEEEecCC-------CCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC-
Q 000224 557 GRCIQIRKLHKVYATK-------RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT- 628 (1833)
Q Consensus 557 ~~~i~i~~l~k~y~~~-------~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~- 628 (1833)
.+.++++||+|.|..+ .+.+.||+||||++++||++||+|++|||||||.++|+|+++|++|+|.++|.+..
T Consensus 278 ~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~ 357 (539)
T COG1123 278 EPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDL 357 (539)
T ss_pred CceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccc
Confidence 3679999999999852 23578999999999999999999999999999999999999999999999998732
Q ss_pred --ccHHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHH
Q 000224 629 --ADMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRK 702 (1833)
Q Consensus 629 --~~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~~-~~~~~~~~LSgGqkqr 702 (1833)
.+....|+.+-+++||| .|.|.+||.+.|.-....++. ...+.++++.++++.+||.. ..++++++||||||||
T Consensus 358 ~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQR 437 (539)
T COG1123 358 TGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQR 437 (539)
T ss_pred ccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHH
Confidence 23455778899999998 599999999999887776543 34666778999999999986 6899999999999999
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 703 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 703 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
++|||||+.+|++|++|||||.||+..+.++.++|+++++ |.|.|+|||||+.++.+||||++|.+|++++.|+.+.+
T Consensus 438 vaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v 517 (539)
T COG1123 438 VAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKV 517 (539)
T ss_pred HHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999964 89999999999999999999999999999999988777
Q ss_pred HhhhCC
Q 000224 781 KHQYGV 786 (1833)
Q Consensus 781 k~~~g~ 786 (1833)
.+....
T Consensus 518 ~~~p~h 523 (539)
T COG1123 518 FENPQH 523 (539)
T ss_pred hcCCCC
Confidence 654333
No 376
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=384.53 Aligned_cols=219 Identities=28% Similarity=0.430 Sum_probs=194.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..++++|+++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 24 ~~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 24 TALEVRNLNLFYGD----KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred cEEEEEEEEEEECC----eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 46999999999953 369999999999999999999999999999999999988 489999999998853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~ 704 (1833)
+....|+.+||+||++.+++. |++||+.+.....+.. .+..+++++++++.+++.+ ..++.+.+||||||||++
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred CHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 234567899999999998886 9999998876555542 3344567889999999863 568889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHh
Confidence 99999999999999999999999999999999999977899999999999999999999999999999999987764
No 377
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.4e-39 Score=382.82 Aligned_cols=221 Identities=21% Similarity=0.388 Sum_probs=192.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCcc-----CCc-cH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKN-----ITA-DM 631 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~-----i~~-~~ 631 (1833)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +.. ..
T Consensus 5 ~~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~ 80 (258)
T PRK11701 5 PLLSVRGLTKLYGP----RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSE 80 (258)
T ss_pred ceEEEeeeEEEcCC----ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCH
Confidence 36999999999953 369999999999999999999999999999999999999999999999987 642 12
Q ss_pred HH----hhcceEEEccCCC--CCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCc-ccccccCCCChhHHHHH
Q 000224 632 DE----IRKGLGVCPQYDI--LFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLAD-KVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 632 ~~----~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~~-~~~~~~~~LSgGqkqrl 703 (1833)
.. .++.+||+||++. +++.+|+.||+.+.....+ ....+.++++.++++.+++.+ ..++.+.+||||||||+
T Consensus 81 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl 160 (258)
T PRK11701 81 AERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRL 160 (258)
T ss_pred HHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHH
Confidence 11 3567999999973 6778899999976433222 223355678899999999974 67899999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++|||||||+|||+.+++++++.|++++ + |.|||++||+++++..+||||++|++|+++..|++.++.
T Consensus 161 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 161 QIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999985 3 899999999999999999999999999999999988775
Q ss_pred h
Q 000224 782 H 782 (1833)
Q Consensus 782 ~ 782 (1833)
.
T Consensus 241 ~ 241 (258)
T PRK11701 241 D 241 (258)
T ss_pred c
Confidence 3
No 378
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=382.86 Aligned_cols=219 Identities=27% Similarity=0.443 Sum_probs=193.9
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..++++||++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 81 (259)
T PRK14260 6 PAIKVKDLSFYYNT----SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRI 81 (259)
T ss_pred ceEEEEEEEEEECC----eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEecccccc
Confidence 36999999999953 4699999999999999999999999999999999999985 58999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
.....++++||+||++.+++ +|++||+.+.....+ .++.+.++++.++++.+|+. +..++.+.+||||||||++
T Consensus 82 ~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 160 (259)
T PRK14260 82 NINRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLC 160 (259)
T ss_pred chHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHH
Confidence 23456778999999999887 899999987655443 24445566788999999884 4578899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEee-----CCEEEeecCHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA-----NGSLKCCGSSLF 779 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~-----~G~l~~~G~~~~ 779 (1833)
|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|+ +|++++.|++.+
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~ 240 (259)
T PRK14260 161 IARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVTTQ 240 (259)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCHHH
Confidence 999999999999999999999999999999999999878999999999999999999999998 599999999887
Q ss_pred HH
Q 000224 780 LK 781 (1833)
Q Consensus 780 Lk 781 (1833)
+.
T Consensus 241 ~~ 242 (259)
T PRK14260 241 IF 242 (259)
T ss_pred Hh
Confidence 64
No 379
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=384.72 Aligned_cols=221 Identities=22% Similarity=0.325 Sum_probs=191.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC--------ceEEEEcCeeCC
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT--------DGTAFIFGKDIR 1535 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~--------~G~i~i~G~~i~ 1535 (1833)
+|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++.
T Consensus 1 ml~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~ 74 (272)
T PRK13547 1 MLTADHLHVARRH------RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLA 74 (272)
T ss_pred CeEEEEEEEEECC------EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcc
Confidence 4789999999953 46999999999999999999999999999999999999998 999999999885
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHH
Q 000224 1536 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1536 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl 1610 (1833)
. .....++.++|+||++.++..+|++||+.+..... +....+..+.+.++++.+++.+..++++.+|||||||||
T Consensus 75 ~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (272)
T PRK13547 75 AIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARV 154 (272)
T ss_pred cCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 4 34455667999999987656689999997643211 111123345678899999999888999999999999999
Q ss_pred HHHHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1611 SVAIAMI---------GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1611 ~lA~al~---------~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
+||+||+ .+|++|||||||+|||+.+++.+++.|+++.++.| +|||++||+++++..+|||+++|++|++
T Consensus 155 ~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~~~~~~d~i~~l~~G~i 233 (272)
T PRK13547 155 QFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNLAARHADRIAMLADGAI 233 (272)
T ss_pred HHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCeE
Confidence 9999999 59999999999999999999999999999864334 6899999999999999999999999999
Q ss_pred EEecChhHHH
Q 000224 1682 RCIGSPQHLK 1691 (1833)
Q Consensus 1682 ~~~g~~~~l~ 1691 (1833)
+..|+++++.
T Consensus 234 ~~~g~~~~~~ 243 (272)
T PRK13547 234 VAHGAPADVL 243 (272)
T ss_pred EEecCHHHHc
Confidence 9999987764
No 380
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=379.70 Aligned_cols=219 Identities=23% Similarity=0.456 Sum_probs=191.5
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~-- 1536 (1833)
.|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+.+| ++|+|.++|+++..
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD------FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC------ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 5889999999963 4599999999999999999999999999999999999763 79999999998863
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++.+||+||++.+++ +|++||+.+.....+.. ....++.+.++++.+++. +..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRL 155 (250)
T ss_pred cchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHH
Confidence 23356778999999988887 89999998766555542 233456778888888874 356889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 156 CIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-K-D-YTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 5899999999999999999999999999999999887
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
..
T Consensus 233 ~~ 234 (250)
T PRK14240 233 FT 234 (250)
T ss_pred Hh
Confidence 54
No 381
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.2e-40 Score=376.80 Aligned_cols=215 Identities=29% Similarity=0.479 Sum_probs=189.8
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC---CCcceEEEcCccCCccHHHhh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEIR 635 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~r 635 (1833)
.++++|++++|++.++.+.+++|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. ...|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~--~~~~ 80 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKP--DQFQ 80 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECCh--HHhc
Confidence 46789999999764334679999999999999999999999999999999999999 999999999998752 3567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCC---CHHHHHHHHHH-HHHHcCCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGV---KEELLESVVAE-MVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~---~~~~~~~~v~~-~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
+.+||+||++.+++.+||+||+.+.....+. ..+...+++++ .++.+++.+..++.+++||||||||++|||||+.
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 8899999999999999999999987654321 22223345555 8999999988899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCH-HHHHhhcCEEEEeeCCEEEeec
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSM-DEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~-~e~~~l~Dri~im~~G~l~~~G 775 (1833)
+|+++||||||+|||+.+++.++++|++++ +|+|+|++||++ +++..+|||+++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999985 589999999999 6999999999999999998765
No 382
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=380.79 Aligned_cols=218 Identities=23% Similarity=0.427 Sum_probs=192.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---cH
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---DM 631 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~~ 631 (1833)
-+++||++.|+ ++.+++|+||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.. ..
T Consensus 6 ~~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 6 ASVKNLNLWYG----SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNV 81 (251)
T ss_pred EEeeeEEEEEC----CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccch
Confidence 56899999995 3469999999999999999999999999999999999986 579999999988742 22
Q ss_pred HHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 632 DEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV--KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~--~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
...|+.+||+||++.+++. |+.||+.+....++. .....++++.++++.+||.+ ..++.+.+||||||||++|
T Consensus 82 ~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 160 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCI 160 (251)
T ss_pred HHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHH
Confidence 3467889999999988886 999999876544443 23445677889999999965 4578899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.+++.+++.|+++++|+|||++||+++++..+||||++|++|+++..|++.++.+
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (251)
T PRK14244 161 ARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFK 237 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999878999999999999999999999999999999999877643
No 383
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=384.11 Aligned_cols=220 Identities=27% Similarity=0.453 Sum_probs=193.1
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
+.++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 23 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 98 (271)
T PRK14238 23 VVFDTQNLNLWYGE----DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSY 98 (271)
T ss_pred eEEEEeeeEEEECC----cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccc
Confidence 46999999999953 359999999999999999999999999999999999997 699999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCC----CcccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGL----ADKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L----~~~~~~~~~~LSgGqkqrl~ 704 (1833)
.....++.+||+||++.+++. |++||+.+.....+.. ....++.+.++++.+++ .+..++++.+||||||||++
T Consensus 99 ~~~~~~~~i~~v~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~ 177 (271)
T PRK14238 99 SVEELRTNVGMVFQKPNPFPK-SIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLC 177 (271)
T ss_pred cHHHHhhhEEEEecCCccccc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHH
Confidence 334567889999999988874 9999999876544433 23345667788888754 45568899999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++++.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 178 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 178 IARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 999999999999999999999999999999999999878999999999999999999999999999999999877643
No 384
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-40 Score=346.66 Aligned_cols=222 Identities=28% Similarity=0.434 Sum_probs=202.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcC-ccCCc--cHHHh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG-KNITA--DMDEI 634 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g-~~i~~--~~~~~ 634 (1833)
..+.++||+.+|+ +..||+++||++.+||.-+|+|||||||||+|.+|+|..+|+.|+|+++| .|++. ..+-.
T Consensus 4 ~iL~~~~vsVsF~----GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp~~G~v~f~g~~dl~~~~e~~IA 79 (249)
T COG4674 4 IILYLDGVSVSFG----GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRPQEGEVLFDGDTDLTKLPEHRIA 79 (249)
T ss_pred ceEEEeceEEEEc----ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCCCcceEEEcCchhhccCCHHHHH
Confidence 4689999999995 45699999999999999999999999999999999999999999999999 78864 34456
Q ss_pred hcceEEEccCCCCCCCCCHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHH
Q 000224 635 RKGLGVCPQYDILFPELTVREHLEMFAV--------LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLG 706 (1833)
Q Consensus 635 r~~ig~~~Q~~~l~~~lTv~e~l~~~~~--------~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA 706 (1833)
|..||--+|.|..|+++||+|||.+... +......+-+++++++|...||.+.+++.+..||-||||+|.|+
T Consensus 80 r~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~LSHGqKQwLEIG 159 (249)
T COG4674 80 RAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAALLSHGQKQWLEIG 159 (249)
T ss_pred HhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhhhccchhhhhhhh
Confidence 7889999999999999999999988543 22222344567899999999999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
+.++++|++|+||||++||....+++.-++|+.++++++|+++.|||+++..+||||.+|++|++.|.|+.+++.+.
T Consensus 160 Mll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsld~v~~d 236 (249)
T COG4674 160 MLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAGKHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSLDEVQND 236 (249)
T ss_pred eeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhcCceEEEEeccHHHHHHhhheeEEEeccceeecccHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887654
No 385
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=378.63 Aligned_cols=219 Identities=27% Similarity=0.475 Sum_probs=192.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC-
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD- 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~~- 1537 (1833)
+|+++|++|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~ 76 (250)
T PRK14262 3 IIEIENFSAYYGE------KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQ 76 (250)
T ss_pred eEEEEeeEEEeCC------ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccch
Confidence 6899999999952 4699999999999999999999999999999999999884 899999999987532
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000224 1538 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1538 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqrl 1610 (1833)
....++.+||+||++.+++ +|++||+.+.....+.. ....++.+.++++.+++.+ ..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 77 LDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred hhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHH
Confidence 2345678999999998887 89999998765544433 2234556778888888853 47889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+||+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS-E-N-YTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh-c-C-cEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999985 3 4 5899999999999999999999999999999999888
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 65
No 386
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=385.08 Aligned_cols=222 Identities=24% Similarity=0.364 Sum_probs=192.6
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~ 1535 (1833)
.+++|+++|++++|++ +.+++|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++.
T Consensus 36 ~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~ 109 (286)
T PRK14275 36 GKPHVVAKNFSIYYGE------FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIY 109 (286)
T ss_pred CceEEEEeeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhh
Confidence 4568999999999953 459999999999999999999999999999999999864 49999999999875
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHH
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~k 1607 (1833)
. .....++++||+||++.+++. |+.||+.+.....+.. ....++.+.++++.+++. +..++++.+||||||
T Consensus 110 ~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 110 GKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQ 188 (286)
T ss_pred hcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHH
Confidence 3 223457789999999988874 9999999865554543 223445677888888873 467889999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
|||+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~-~-~-~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~ 265 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELR-G-S-YTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPT 265 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999985 3 3 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000224 1688 QHLKT 1692 (1833)
Q Consensus 1688 ~~l~~ 1692 (1833)
+++.+
T Consensus 266 ~~~~~ 270 (286)
T PRK14275 266 AQLFT 270 (286)
T ss_pred HHHHh
Confidence 88764
No 387
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.5e-39 Score=379.57 Aligned_cols=218 Identities=23% Similarity=0.349 Sum_probs=190.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC----CceEEEEcCeeCCCChH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP----TDGTAFIFGKDIRSDPK 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p----~~G~i~i~G~~i~~~~~ 1539 (1833)
+|+++|++|+|+ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|+++.. ..
T Consensus 4 ~l~~~~l~~~~~-------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~-~~ 75 (254)
T PRK10418 4 QIELRNIALQAA-------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP-CA 75 (254)
T ss_pred EEEEeCeEEEec-------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc-cc
Confidence 689999999992 3489999999999999999999999999999999999999 99999999998853 22
Q ss_pred HhccceEEEecCCC--CCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhHHHHHHHHH
Q 000224 1540 AARRLIGYCPQFDA--LLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~LSgG~kqrl~lA~ 1614 (1833)
..++.+||+||++. +.+.+|+.+++.......+... .++.+.++++.+++.+ ..++++.+|||||||||+|||
T Consensus 76 ~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~lar 153 (254)
T PRK10418 76 LRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPA--DDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIAL 153 (254)
T ss_pred cccceEEEEecCCccccCccccHHHHHHHHHHHcCCCh--HHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHH
Confidence 23467999999974 4456799999876554444432 2356788999999976 468999999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||+.+|++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 154 al~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 154 ALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRA-LGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999864434 689999999999999999999999999999999988864
No 388
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=383.82 Aligned_cols=221 Identities=25% Similarity=0.453 Sum_probs=192.8
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~ 1535 (1833)
++++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 36 ~~~~l~i~~l~~~~~~------~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~ 109 (285)
T PRK14254 36 GETVIEARDLNVFYGD------EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVY 109 (285)
T ss_pred CCceEEEEEEEEEECC------EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcc
Confidence 4568999999999953 459999999999999999999999999999999999987 69999999999874
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
. .....++++||+||++.+++. |+.||+.+.....+.+. ...+++.++++.+++. +..++++.+|||||||
T Consensus 110 ~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 110 DADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred ccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHH
Confidence 3 234567789999999888875 99999987665555443 3456678889999884 4578999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEE-EEECCEEEEecCh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIG-IMVGGQLRCIGSP 1687 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~-im~~G~i~~~g~~ 1687 (1833)
||+||+||+.+|+||||||||+|||+.+++.++++|+++++ + .|||++||+++++..+|||++ +|++|++++.|++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~--~-~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~ 264 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE--E-YTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDT 264 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCH
Confidence 99999999999999999999999999999999999999853 3 489999999999999999976 5699999999998
Q ss_pred hHHHh
Q 000224 1688 QHLKT 1692 (1833)
Q Consensus 1688 ~~l~~ 1692 (1833)
+++..
T Consensus 265 ~~~~~ 269 (285)
T PRK14254 265 DKIFE 269 (285)
T ss_pred HHHHh
Confidence 88754
No 389
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.1e-40 Score=381.22 Aligned_cols=219 Identities=24% Similarity=0.422 Sum_probs=186.5
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
|+++||++.|+.. .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 1 i~~~~l~~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (237)
T cd03252 1 ITFEHVRFRYKPD--GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQV 78 (237)
T ss_pred CEEEEEEEecCCC--CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcE
Confidence 4689999999642 2469999999999999999999999999999999999999999999999998753 344567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~-----~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
||+||++.+++ .||.||+.+... +.......+ .+.++++.+ ++.+..++++.+|||||||||+|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~ 155 (237)
T cd03252 79 GVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIH 155 (237)
T ss_pred EEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhh
Confidence 99999998875 699999987431 222222211 234455555 66666788999999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 784 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~ 784 (1833)
+|++|||||||+|||+.+++.+++.|+++++|+|||++||++++++ .|||+++|++|+++..|++.++....
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (237)
T cd03252 156 NPRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSHDELLAEN 227 (237)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCHHHHHhcc
Confidence 9999999999999999999999999999977999999999999996 59999999999999999988876553
No 390
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=342.62 Aligned_cols=222 Identities=23% Similarity=0.400 Sum_probs=202.8
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-----
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD----- 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~----- 1537 (1833)
+.|+++||.|+|| ...+|++||++-++|+++.|+|.+||||||++++|.=+.+|+.|.|.++|+.++..
T Consensus 5 ~~l~v~dlHK~~G------~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G 78 (256)
T COG4598 5 NALEVEDLHKRYG------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDG 78 (256)
T ss_pred cceehhHHHhhcc------cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCC
Confidence 4689999999996 46799999999999999999999999999999999999999999999999887421
Q ss_pred ------h---HHhccceEEEecCCCCCCCCCHHHHHHHH-HHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHH
Q 000224 1538 ------P---KAARRLIGYCPQFDALLEYLTVQEHLELY-ARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNK 1607 (1833)
Q Consensus 1538 ------~---~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~-~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~k 1607 (1833)
. .++|.++|+|+|+..||..|||.||+.-. -..-|.++.+..++++.+|.++|+.+..+.++..||||||
T Consensus 79 ~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQ 158 (256)
T COG4598 79 QLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQ 158 (256)
T ss_pred CeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHH
Confidence 1 34677899999999999999999997542 2345888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1608 RKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1608 qrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
||++|||||+.+|+++++|||||+|||+-.-++.+.+++++ ++| +|.+++||.|.++..++++|+.+++|++-+.|+|
T Consensus 159 QR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LA-eEg-rTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P 236 (256)
T COG4598 159 QRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLA-EEG-RTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHH-HhC-CeEEEEeeehhHHHhhhhheEEeecceecccCCh
Confidence 99999999999999999999999999999999999999997 455 5899999999999999999999999999999999
Q ss_pred hHHHh
Q 000224 1688 QHLKT 1692 (1833)
Q Consensus 1688 ~~l~~ 1692 (1833)
+++..
T Consensus 237 ~qvf~ 241 (256)
T COG4598 237 EQVFG 241 (256)
T ss_pred HHHhc
Confidence 99864
No 391
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=379.41 Aligned_cols=222 Identities=23% Similarity=0.417 Sum_probs=193.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~G~~i~~- 1536 (1833)
.+|+++|++|+|++ ..+++|+||++++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++..
T Consensus 6 ~~l~~~nl~~~~~~------~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~ 79 (261)
T PRK14258 6 PAIKVNNLSFYYDT------QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYER 79 (261)
T ss_pred ceEEEeeEEEEeCC------eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhcc
Confidence 36899999999953 35899999999999999999999999999999999999986 8999999998742
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqr 1609 (1833)
.....++.++|+||++.+++ +|++||+.+.....+. +..+..+.+.++++.+++.+ ..++++.+||||||||
T Consensus 80 ~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 80 RVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQR 158 (261)
T ss_pred ccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHH
Confidence 22356778999999988887 8999999876554443 33334456778899998743 4688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC-----CEEEEe
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG-----GQLRCI 1684 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~-----G~i~~~ 1684 (1833)
++|||||+.+|++|||||||+|||+.+++.+++.|+++++++| +|||++||+++++..+||||++|++ |+++..
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 9999999999999999999999999999999999999864444 6899999999999999999999999 999999
Q ss_pred cChhHHHh
Q 000224 1685 GSPQHLKT 1692 (1833)
Q Consensus 1685 g~~~~l~~ 1692 (1833)
|+++++.+
T Consensus 238 ~~~~~~~~ 245 (261)
T PRK14258 238 GLTKKIFN 245 (261)
T ss_pred CCHHHHHh
Confidence 99998864
No 392
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=380.12 Aligned_cols=221 Identities=24% Similarity=0.377 Sum_probs=193.3
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~ 1536 (1833)
..+|+++|++|+|+ ++.+++|+||++++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 18 ~~~l~~~nl~~~~~------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~ 91 (267)
T PRK14237 18 EIALSTKDLHVYYG------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINR 91 (267)
T ss_pred CeEEEEeeEEEEEC------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEccc
Confidence 45799999999995 2569999999999999999999999999999999999986 589999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
.....++.|||+||++.+++ .|++||+.+.....+. .+...++++.++++.++|. +..++++.+|||||||
T Consensus 92 ~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~q 170 (267)
T PRK14237 92 KEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQ 170 (267)
T ss_pred ccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHH
Confidence 23355778999999988887 6999999876544443 2334456678889999884 3578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++|||||+.+|++|||||||+|||+.+++.++++|+++. + + .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 171 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 171 RLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-K-N-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999984 3 4 58999999999999999999999999999999998
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++..
T Consensus 248 ~~~~ 251 (267)
T PRK14237 248 NIFT 251 (267)
T ss_pred HHhc
Confidence 8754
No 393
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=378.16 Aligned_cols=220 Identities=23% Similarity=0.391 Sum_probs=191.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~- 1536 (1833)
++|+++|++++|+. +.+++++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 3 ~~l~~~~l~~~~~~------~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~ 76 (251)
T PRK14251 3 NIISAKDVHLSYGN------YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGS 76 (251)
T ss_pred ceEEEEeeEEEECC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccc
Confidence 36899999999953 469999999999999999999999999999999999997 489999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
.....++.+||++|++.+++ .|++||+.+.....+... +..++.+.++++.+++. +..++++.+||||||||
T Consensus 77 ~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14251 77 KMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQR 155 (251)
T ss_pred cchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHH
Confidence 22345778999999998886 799999987655444432 23445677888999984 44688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+||||++|++|++++.|++++
T Consensus 156 ~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 156 ICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK-H-Q-YTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH-c-C-CeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+..
T Consensus 233 ~~~ 235 (251)
T PRK14251 233 MFI 235 (251)
T ss_pred HHh
Confidence 753
No 394
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.8e-39 Score=372.81 Aligned_cols=211 Identities=29% Similarity=0.462 Sum_probs=188.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-c---HHHhh
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-D---MDEIR 635 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~---~~~~r 635 (1833)
++++|+++.|+.+.+.+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. . ....+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999999643223579999999999999999999999999999999999999999999999998742 1 22457
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCc
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLK-GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSK 714 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~-~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~ 714 (1833)
+.+||+||++.+++.+|+.||+.+..... +...++.++++.++++.+||.+..++.+.+||||||||++|||||+.+|+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~~p~ 161 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVHRPK 161 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999999876554 34556667789999999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 715 VVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 715 vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
++||||||+|||+.+++.++++|++++ +++|||++||+++.. .+||+|++|++|++
T Consensus 162 illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 162 LVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999985 389999999999865 68999999999986
No 395
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=382.02 Aligned_cols=220 Identities=25% Similarity=0.374 Sum_probs=195.0
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc--c
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--D 630 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--~ 630 (1833)
..++++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 20 ~~l~i~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 95 (276)
T PRK14271 20 PAMAAVNLTLGFAG----KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRD 95 (276)
T ss_pred cEEEEeeEEEEECC----EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccch
Confidence 46899999999953 4699999999999999999999999999999999999986 79999999998753 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
....++.+||+||++.+|+ .|++||+.+.....+ .+..+.++++.++++.+|+.. ..++.+.+||||||||++|
T Consensus 96 ~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 96 VLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred hHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHH
Confidence 3456788999999999888 799999987654332 344555667788999999974 3578899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999998767899999999999999999999999999999999887754
No 396
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=389.27 Aligned_cols=222 Identities=26% Similarity=0.424 Sum_probs=195.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..|+++|+++.|.+. .+.+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 79 ~~i~~~nls~~y~~~--~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~ 156 (329)
T PRK14257 79 NVFEIRNFNFWYMNR--TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKI 156 (329)
T ss_pred ceEEEEeeEEEecCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 479999999999642 3469999999999999999999999999999999999986 579999999999853
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEE-LLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~-~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
....+|+.+|||||++.+|+ .|++||+.|+....+...+ ..++.+.++++.++|. +..++.+.+||||||||++
T Consensus 157 ~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl~ 235 (329)
T PRK14257 157 SSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRLC 235 (329)
T ss_pred chHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHHH
Confidence 23456889999999999886 6999999986555444433 3345678889999874 3467889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|+||||||||+|||+.+++.+++.|+++++++|||++||+++++..+||||++|++|++++.|++.++..
T Consensus 236 LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~ 313 (329)
T PRK14257 236 IARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFI 313 (329)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999999888999999999999999999999999999999999988753
No 397
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=332.58 Aligned_cols=216 Identities=26% Similarity=0.417 Sum_probs=201.5
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC-------ccH
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT-------ADM 631 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~-------~~~ 631 (1833)
.|+++|+++.|+. ..+|-|++|+.++||.+.|+||+|||||||++.|.=+..|.+|+..|.|.... +..
T Consensus 2 sirv~~in~~yg~----~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i 77 (242)
T COG4161 2 SIQLNGINCFYGA----HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred ceEEccccccccc----chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHH
Confidence 4899999999954 46999999999999999999999999999999999999999999999886542 234
Q ss_pred HHhhcceEEEccCCCCCCCCCHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHh
Q 000224 632 DEIRKGLGVCPQYDILFPELTVREHLE-MFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 632 ~~~r~~ig~~~Q~~~l~~~lTv~e~l~-~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
.+.|+++|+|+|.-.|||.+||.||+. -.++..|+++++.+.++.++|+++.|.++.|+.+-.|||||+|||+|||||+
T Consensus 78 ~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiaralm 157 (242)
T COG4161 78 RDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHHHh
Confidence 568899999999999999999999974 5677889999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHH
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKK-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSL 778 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~ 778 (1833)
.+|+||++||||++|||+-..++.++|+++.+ |.|-+++||..+.|...|.|++.|++|+|++.|+..
T Consensus 158 mkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~ 226 (242)
T COG4161 158 MEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred cCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchh
Confidence 99999999999999999999999999999975 999999999999999999999999999999999863
No 398
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=377.53 Aligned_cols=220 Identities=27% Similarity=0.438 Sum_probs=191.0
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~G~~i~~-- 1536 (1833)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 77 (252)
T PRK14272 4 LLSAQDVNIYYGD------KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPR 77 (252)
T ss_pred EEEEeeeEEEECC------EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCc
Confidence 6899999999952 46999999999999999999999999999999999999875 8999999998853
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++.+||+||++.+++.+|+.||+.+.....+.. .++..+.+.++++.+++. +..++++++||||||||+
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14272 78 VDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRL 157 (252)
T ss_pred cCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHH
Confidence 23355778999999999999899999998755444432 233445566677777653 456889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+||+||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 158 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 158 CIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK-K-V-TTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999985 3 4 6899999999999999999999999999999999887
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
..
T Consensus 235 ~~ 236 (252)
T PRK14272 235 FT 236 (252)
T ss_pred Hh
Confidence 54
No 399
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.1e-39 Score=374.79 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=181.0
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC----CceEEEEcCeeCCCChHHhccceEEEecCCC--CCCCC
Q 000224 1485 AVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP----TDGTAFIFGKDIRSDPKAARRLIGYCPQFDA--LLEYL 1558 (1833)
Q Consensus 1485 al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p----~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~--l~~~l 1558 (1833)
+++|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++... ...++.+||++|++. +++.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCchhhcCccc
Confidence 57899999999999999999999999999999999999 899999999988542 223457999999974 55678
Q ss_pred CHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc---cccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHH
Q 000224 1559 TVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL---KHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPI 1635 (1833)
Q Consensus 1559 Tv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~---~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~ 1635 (1833)
|+.||+.+.....+......++++.++++.+++. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999997765544443344456788999999997 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1636 AKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1636 ~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+++.+++.|++++++.| +|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 160 ~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 160 NQARVLKLLRELRQLFG-TGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999864334 689999999999999999999999999999999998864
No 400
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.3e-39 Score=370.27 Aligned_cols=200 Identities=26% Similarity=0.409 Sum_probs=180.0
Q ss_pred EEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----c-HHHhhc
Q 000224 562 IRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----D-MDEIRK 636 (1833)
Q Consensus 562 i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~-~~~~r~ 636 (1833)
++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. . ....++
T Consensus 1 i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 76 (206)
T TIGR03608 1 LKNISKKFGD----KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRRE 76 (206)
T ss_pred CcceEEEECC----EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHh
Confidence 4689999953 469999999999999999999999999999999999999999999999998642 1 223567
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
.+||++|++.+++.+|++||+.+.....+....+.+++++++++.+|+.+..++++.+||||||||++|||||+.+|++|
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~ll 156 (206)
T TIGR03608 77 KLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPPLI 156 (206)
T ss_pred CeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 89999999999999999999998766556666666778999999999998889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEe
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 766 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im 766 (1833)
||||||+|||+.+++.++++|+++. +|+|||++||++++++ +||||++|
T Consensus 157 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~~d~i~~l 206 (206)
T TIGR03608 157 LADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAK-QADRVIEL 206 (206)
T ss_pred EEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHh-hcCEEEeC
Confidence 9999999999999999999999985 5899999999999875 79999876
No 401
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=381.69 Aligned_cols=219 Identities=27% Similarity=0.414 Sum_probs=192.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
+.|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 9 ~~l~i~~v~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 84 (264)
T PRK14243 9 TVLRTENLNVYYGS----FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDV 84 (264)
T ss_pred eEEEEeeeEEEECC----EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999986 489999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
.....++.+||++|++.+++. |+.||+.+.....+.. ...++++.++++.+++. +..++.+.+||||||||++|
T Consensus 85 ~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 85 DPVEVRRRIGMVFQKPNPFPK-SIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred ChHHHhhhEEEEccCCccccc-cHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHH
Confidence 334567889999999988874 9999998876544432 23456677888888874 34688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEee---------CCEEEeecC
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA---------NGSLKCCGS 776 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~---------~G~l~~~G~ 776 (1833)
||||+.+|++|||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999999877899999999999999999999998 899999999
Q ss_pred HHHHHh
Q 000224 777 SLFLKH 782 (1833)
Q Consensus 777 ~~~Lk~ 782 (1833)
+.++.+
T Consensus 243 ~~~~~~ 248 (264)
T PRK14243 243 TEKIFN 248 (264)
T ss_pred HHHHHh
Confidence 988854
No 402
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=377.86 Aligned_cols=220 Identities=25% Similarity=0.405 Sum_probs=189.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
|+++|+++.|+++ ++.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 1 i~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (234)
T cd03251 1 VEFKNVTFRYPGD--GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQI 78 (234)
T ss_pred CEEEEEEEEeCCC--CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 4689999999643 1359999999999999999999999999999999999999999999999988753 344567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~-----~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
||+||++.+++ .|++||+.++... .......+ .+.+.++.+ ++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~enl~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 155 (234)
T cd03251 79 GLVSQDVFLFN-DTVAENIAYGRPG--ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLK 155 (234)
T ss_pred EEeCCCCeecc-ccHHHHhhccCCC--CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998886 6999999875321 12222221 245566666 67777888899999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
+|+++||||||+|||+.+++.+++.|+++++++|||++||+++++.. |||+++|++|+++..|+++++...++
T Consensus 156 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 156 DPPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999999999999999999888999999999999986 99999999999999999988876654
No 403
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.7e-40 Score=336.93 Aligned_cols=214 Identities=25% Similarity=0.417 Sum_probs=199.1
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----cHHHh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA----DMDEI 634 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~----~~~~~ 634 (1833)
.|++++++|..+...+...+|++|+|.|++||-++|+||+|||||||+-+|+|+..|++|+|.+.|++..+ .....
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 68999999999887788899999999999999999999999999999999999999999999999998853 23334
Q ss_pred h-cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCC
Q 000224 635 R-KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDS 713 (1833)
Q Consensus 635 r-~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p 713 (1833)
| +++|+|+|...|.|+||..||+...+.++|-...+..+.+.++|+.+||.+..+.++++||||+||||+||||++..|
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~~P 165 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAGRP 165 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcCCC
Confidence 4 789999999999999999999999999999766777888999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEe
Q 000224 714 KVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKC 773 (1833)
Q Consensus 714 ~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~ 773 (1833)
+||+-||||-+||..+-+++-+++-.+. .|.|.|++|||...|.+ |||++-|++|+|+.
T Consensus 166 ~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 166 DVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred CEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 9999999999999999999999998874 48999999999999986 99999999999874
No 404
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.1e-39 Score=380.22 Aligned_cols=228 Identities=25% Similarity=0.353 Sum_probs=194.9
Q ss_pred eEEEEeEEEEcCCCc---cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h-
Q 000224 1464 IIYLRNLRKVYPGGK---RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P- 1538 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~---~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~- 1538 (1833)
+|+++||+|.|+.+. ...++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 689999999996310 00135699999999999999999999999999999999999999999999999987542 2
Q ss_pred --HHhccceEEEecCC--CCCCCCCHHHHHHHHHH-HcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHH
Q 000224 1539 --KAARRLIGYCPQFD--ALLEYLTVQEHLELYAR-IKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1539 --~~~~~~ig~~pQ~~--~l~~~lTv~e~l~~~~~-~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~l 1612 (1833)
...++.+||+||++ .+++..|+.|++.+... ..+....+..+.+.++++.+++. ...++++.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 24577899999997 46677899999876433 22344444455688999999996 57899999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
|+||+.+|++|||||||+|||+.+++.+.+.|++++++.+ +|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 241 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFG-TACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKLT 241 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcC-cEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhccC
Confidence 9999999999999999999999999999999999864434 689999999999999999999999999999999888653
No 405
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.7e-39 Score=372.94 Aligned_cols=216 Identities=27% Similarity=0.420 Sum_probs=187.3
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCChHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSDPKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~---p~~G~i~i~G~~i~~~~~~ 1540 (1833)
.+.++|++++|++.+ +.+.+++|+||++++||++||+||||||||||+++|+|+++ |++|+|.++|.++. ...
T Consensus 3 ~~~~~~~~~~~~~~~--~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~--~~~ 78 (226)
T cd03234 3 VLPWWDVGLKAKNWN--KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK--PDQ 78 (226)
T ss_pred cceeecceeeeecCc--cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC--hHH
Confidence 467999999997421 13679999999999999999999999999999999999999 99999999999875 235
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCC---ChhhHHHHHHH-HHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGV---AEYRMDDVVME-KLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~---~~~~~~~~~~~-~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.++++||+||++.+++.+|++||+.+.....+. ......+.+.+ .++.+++.+..++.+++|||||||||+|||||
T Consensus 79 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 79 FQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred hcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHH
Confidence 678899999999999999999999886554321 11222234455 78899998888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCH-HHHHHHcCEEEEEECCEEEEec
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSM-NEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~-~e~~~l~drv~im~~G~i~~~g 1685 (1833)
+.+|++|||||||+|||+.+++.+++.|+++++ +| .|||++||++ +++..+|||+++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999863 44 5899999999 6999999999999999998765
No 406
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.6e-38 Score=418.24 Aligned_cols=128 Identities=28% Similarity=0.468 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHHHHHHhcCC---CEEEEeCCCCCC
Q 000224 1557 YLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSVAIAMIGDP---PIVILDEPSTGM 1632 (1833)
Q Consensus 1557 ~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgG~kqrl~lA~al~~~p---~vllLDEPTsgL 1632 (1833)
+||+.|++.++..++++ ....+.++.+||.. ..++++.+||||||||+.||++|+.+| +++||||||+||
T Consensus 791 ~ltv~E~l~~f~~~~~i------~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGL 864 (943)
T PRK00349 791 DMTVEEALEFFEAIPKI------ARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGL 864 (943)
T ss_pred cCcHHHHHHHHHhchhh------hHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 37999999998765432 23357899999975 578999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE------ECCEEEEecChhHHHhh
Q 000224 1633 DPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM------VGGQLRCIGSPQHLKTR 1693 (1833)
Q Consensus 1633 D~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im------~~G~i~~~g~~~~l~~~ 1693 (1833)
|+..++.+++.|+++. ++| .|||++||++++++ .||+|++| .+|++++.|+++++.+.
T Consensus 865 D~~~~~~L~~~L~~l~-~~G-~TVIiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~ 928 (943)
T PRK00349 865 HFEDIRKLLEVLHRLV-DKG-NTVVVIEHNLDVIK-TADWIIDLGPEGGDGGGEIVATGTPEEVAKV 928 (943)
T ss_pred CHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHH-hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC
Confidence 9999999999999986 345 58999999999986 69999999 79999999999998753
No 407
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-39 Score=379.74 Aligned_cols=221 Identities=26% Similarity=0.420 Sum_probs=192.5
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~ 1536 (1833)
..+++++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 23 ~~~l~~~nl~~~~~~------~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~ 96 (272)
T PRK14236 23 QTALEVRNLNLFYGD------KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYD 96 (272)
T ss_pred CcEEEEEEEEEEECC------eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcc
Confidence 347999999999953 458999999999999999999999999999999999988 489999999999853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
.....++.+||+||++.+++. |++||+.+.....+... ...++.+.++++.+++. +..++++.+|||||||
T Consensus 97 ~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 175 (272)
T PRK14236 97 KKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQ 175 (272)
T ss_pred cccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHH
Confidence 233567889999999988885 99999987655555322 23345677888888885 3568899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|++|++++.|+++
T Consensus 176 rv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~-~-~-~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 176 RLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELK-S-K-YTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHH-h-C-CeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 9999999999999999999999999999999999999985 3 4 58999999999999999999999999999999988
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++..
T Consensus 253 ~~~~ 256 (272)
T PRK14236 253 TLFT 256 (272)
T ss_pred HHhc
Confidence 8753
No 408
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=377.60 Aligned_cols=220 Identities=29% Similarity=0.454 Sum_probs=192.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC--C---CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP--P---TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~g~~i~~--- 629 (1833)
..|+++||+|.|+. +.+++|+||++.+||+++|+|+||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14255 4 KIITSSDVHLFYGK----FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNE 79 (252)
T ss_pred ceEEEEeEEEEECC----eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccc
Confidence 46899999999953 469999999999999999999999999999999999975 5 59999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVK-EELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLS 704 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~ 704 (1833)
+....++.+||+||++.+++ .|++||+.+.....+.. .+..++++.+.++.+++. +..++.+.+||||||||++
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~ 158 (252)
T PRK14255 80 DVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVC 158 (252)
T ss_pred cHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHH
Confidence 23456778999999998888 69999998876555543 333456778888888764 4568889999999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
|||||+.+|++|||||||+|||+.+++.+.++|+++++++|||++||+++++..+||||++|++|+++..|++.++..
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14255 159 IARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFL 236 (252)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999999777899999999999999999999999999999998876643
No 409
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=376.72 Aligned_cols=219 Identities=25% Similarity=0.419 Sum_probs=190.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~-- 1536 (1833)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 76 (249)
T PRK14253 3 KFNIENLDLFYGE------NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNI 76 (249)
T ss_pred eEEEeccEEEECC------eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEccccc
Confidence 5899999999952 4599999999999999999999999999999999999986 59999999998842
Q ss_pred ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHHH
Q 000224 1537 DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKLS 1611 (1833)
Q Consensus 1537 ~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl~ 1611 (1833)
.....++.+||+||++.+++ .|+.||+.+.....+.. ....++++.+.++.+++. +..++++.+|||||||||+
T Consensus 77 ~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 77 DVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred chHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHH
Confidence 34456778999999998887 89999998765444432 233445677788888874 3567899999999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1612 VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1612 lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELK-K-N-YTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999985 3 3 58999999999999999999999999999999988775
Q ss_pred h
Q 000224 1692 T 1692 (1833)
Q Consensus 1692 ~ 1692 (1833)
+
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 3
No 410
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.4e-39 Score=370.52 Aligned_cols=214 Identities=27% Similarity=0.455 Sum_probs=187.2
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-h---H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-P---K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~---~ 1539 (1833)
+++++|+++.|+++. +.+.+++|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++... . .
T Consensus 1 ~l~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (220)
T TIGR02982 1 VISIRNLNHYYGHGS--LRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELV 78 (220)
T ss_pred CEEEEEEEEEccCCC--cceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHH
Confidence 378999999996421 125699999999999999999999999999999999999999999999999988532 1 2
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
..++.+||+||++.+++.+|+.||+.+.....+ ...++..+.+.++++.+++.+..++++.+||||||||++|||||+.
T Consensus 79 ~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~ 158 (220)
T TIGR02982 79 QLRRNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVH 158 (220)
T ss_pred HHHhheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 356789999999999988999999998765542 3444556678899999999988999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
+|++|||||||+|||+.+++.+++.|+++.++.+ +|||++||+++. ..+||||++|++|++
T Consensus 159 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sh~~~~-~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 159 RPKLVLADEPTAALDSKSGRDVVELMQKLAREQG-CTILIVTHDNRI-LDVADRIVHMEDGKL 219 (220)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHH-HhhCCEEEEEECCEE
Confidence 9999999999999999999999999999864344 689999999985 569999999999986
No 411
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=380.47 Aligned_cols=223 Identities=19% Similarity=0.380 Sum_probs=191.8
Q ss_pred CCcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeC
Q 000224 1460 VDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDI 1534 (1833)
Q Consensus 1460 ~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i 1534 (1833)
++.++++++|+++.|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++
T Consensus 20 ~~~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~ 93 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGE------DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNI 93 (271)
T ss_pred CCceEEEEeeeEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEc
Confidence 34568999999999953 458999999999999999999999999999999999997 6999999999988
Q ss_pred CC---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCC----ccccCCCCCCCChhH
Q 000224 1535 RS---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDL----LKHAKKPSFTLSGGN 1606 (1833)
Q Consensus 1535 ~~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L----~~~~~~~~~~LSgG~ 1606 (1833)
.. .....++.+||+||++.+++ .|++||+.+.....+... ...++.+.+.++.+++ .+..++++.+|||||
T Consensus 94 ~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe 172 (271)
T PRK14238 94 FDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQ 172 (271)
T ss_pred ccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHH
Confidence 42 23455778999999998887 599999987654444332 2234456677777753 445788999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||++||+||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|+++..|+
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 249 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELK-K-D-YSIIIVTHNMQQAARISDKTAFFLNGYVNEYDD 249 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH-c-C-CEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 4 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
++++.+
T Consensus 250 ~~~~~~ 255 (271)
T PRK14238 250 TDKIFS 255 (271)
T ss_pred HHHHHc
Confidence 988754
No 412
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.7e-39 Score=377.45 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=189.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCee-----CCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKD-----IRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~-----i~~- 1536 (1833)
++|+++|+++.|++ +.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +..
T Consensus 2 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 75 (253)
T TIGR02323 2 PLLQVSGLSKSYGG------GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQL 75 (253)
T ss_pred ceEEEeeeEEEeCC------ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccC
Confidence 47899999999953 458999999999999999999999999999999999999999999999977 543
Q ss_pred ChHH----hccceEEEecCCC--CCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHH
Q 000224 1537 DPKA----ARRLIGYCPQFDA--LLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ~~~~----~~~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kq 1608 (1833)
.... .++.+||++|++. +++.+|+.||+.......+ ......++.+.++++.+++. ...++++.+|||||||
T Consensus 76 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 76 SEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred CHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 2221 2457999999974 4456789999865322111 11223346678899999997 4789999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
||+|||||+.+|++|||||||+|||+.+++.+++.|+++.++.| .|||++||+++++..+|||+++|++|+++..|+++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~ 234 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLG-LAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTD 234 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999864434 68999999999999999999999999999999988
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++.+
T Consensus 235 ~~~~ 238 (253)
T TIGR02323 235 QVLD 238 (253)
T ss_pred HHhc
Confidence 8764
No 413
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=382.11 Aligned_cols=217 Identities=24% Similarity=0.319 Sum_probs=190.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC--------cceEEEcCccCCc-c
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT--------TGDALVFGKNITA-D 630 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~--------~G~i~i~g~~i~~-~ 630 (1833)
|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 2 l~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~ 77 (272)
T PRK13547 2 LTADHLHVARRH----RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAID 77 (272)
T ss_pred eEEEEEEEEECC----EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCC
Confidence 789999999943 46999999999999999999999999999999999999998 9999999998753 3
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK----GVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLG 706 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA 706 (1833)
....++.+||+||++.+++.+|++||+.+..... +....+.++++.++++.+|+.+..++++.+||||||||++||
T Consensus 78 ~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 78 APRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHH
Confidence 4455667999999987666689999998753211 111233456788999999999888999999999999999999
Q ss_pred HHHh---------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 707 IALI---------GDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 707 ~al~---------~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+ .+|++|||||||+|||+.+++.++++|++++ + |+|||++||+++++..+|||+++|++|+++..|
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g 237 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHG 237 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEec
Confidence 9999 5999999999999999999999999999985 3 899999999999999999999999999999999
Q ss_pred CHHHH
Q 000224 776 SSLFL 780 (1833)
Q Consensus 776 ~~~~L 780 (1833)
++.++
T Consensus 238 ~~~~~ 242 (272)
T PRK13547 238 APADV 242 (272)
T ss_pred CHHHH
Confidence 87665
No 414
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=376.06 Aligned_cols=221 Identities=22% Similarity=0.405 Sum_probs=192.1
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCC-----ceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPT-----DGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~G~~i~~- 1536 (1833)
++++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++..
T Consensus 3 ~~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~ 76 (251)
T PRK14249 3 PKIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSP 76 (251)
T ss_pred ceEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEcccc
Confidence 46899999999953 45999999999999999999999999999999999999997 6999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
.....++.+||+||++.+++. |++||+.+....++... +..++.+.+.++.+++. +..++++.+||||||||
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 77 NLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQR 155 (251)
T ss_pred ccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHH
Confidence 233567889999999988874 99999987655544432 23345567778888864 45789999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|++|||||||+|||+.+++.++++|+++. + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-Q-N-YTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 999999999999999999999999999999999999984 3 4 589999999999999999999999999999999988
Q ss_pred HHhh
Q 000224 1690 LKTR 1693 (1833)
Q Consensus 1690 l~~~ 1693 (1833)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 8653
No 415
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=417.13 Aligned_cols=220 Identities=24% Similarity=0.410 Sum_probs=194.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~- 1540 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... ...
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~ 76 (501)
T PRK10762 3 ALLQLKGIDKAFPG------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSS 76 (501)
T ss_pred ceEEEeeeEEEeCC------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHH
Confidence 47999999999952 4699999999999999999999999999999999999999999999999998542 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHc---C-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIK---G-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~---g-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.++++||+||++.+++.+||+||+.+....+ + .+..+.++++.++++.+++.+..++++++|||||||||+||+||
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 77 QEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred HhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 3567999999999999999999998754322 1 22333456678899999999888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||+++++.+||||++|++|++++.|+++++
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~-~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKS-QG-RGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 999999999999999999999999999999863 44 6899999999999999999999999999999987654
No 416
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=422.97 Aligned_cols=225 Identities=24% Similarity=0.365 Sum_probs=199.9
Q ss_pred ceEEEEeeEEEecCCC-------CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCcc
Q 000224 558 RCIQIRKLHKVYATKR-------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITAD 630 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~-------~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~ 630 (1833)
..++++||+|.|+.++ +.+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 312 ~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~ 391 (623)
T PRK10261 312 PILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTL 391 (623)
T ss_pred ceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcC
Confidence 4799999999996321 124699999999999999999999999999999999999999999999999988531
Q ss_pred ----HHHhhcceEEEccCC--CCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHH
Q 000224 631 ----MDEIRKGLGVCPQYD--ILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRK 702 (1833)
Q Consensus 631 ----~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqr 702 (1833)
....|++|||+||++ .+++.+||.||+.+.....+. ...+.++++.++|+.+||. +..++++++||||||||
T Consensus 392 ~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQR 471 (623)
T PRK10261 392 SPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQR 471 (623)
T ss_pred CHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHH
Confidence 233567899999997 589999999999886655554 3445667899999999996 57899999999999999
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 703 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 703 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|+|||||+.+|++|||||||+|||+.++++++++|++++ + |.|||++|||++++..+||||++|++|++++.|++.++
T Consensus 472 v~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i 551 (623)
T PRK10261 472 ICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAV 551 (623)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999985 3 89999999999999999999999999999999999887
Q ss_pred Hh
Q 000224 781 KH 782 (1833)
Q Consensus 781 k~ 782 (1833)
..
T Consensus 552 ~~ 553 (623)
T PRK10261 552 FE 553 (623)
T ss_pred hc
Confidence 54
No 417
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=376.81 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=191.7
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCCC
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~G~~i~~~ 1537 (1833)
++|+++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+.+ | ++|+|.++|+++...
T Consensus 5 ~~i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~ 78 (253)
T PRK14261 5 IILSTKNLNLWYGE------KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDS 78 (253)
T ss_pred ceEEEeeeEEEECC------eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccc
Confidence 57999999999953 469999999999999999999999999999999999976 3 489999999998642
Q ss_pred ---hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1538 ---PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1538 ---~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
....++.+||+||++.+++ .|++||+.+....++.. ....++.+.++++.+++. +..++++.+||||||||
T Consensus 79 ~~~~~~~~~~i~~~~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 157 (253)
T PRK14261 79 GADVVALRRKIGMVFQRPNPFP-KSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQR 157 (253)
T ss_pred ccchhhhhceEEEEecCCccCc-ccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHH
Confidence 3456778999999998887 49999999876655532 233455677888888874 34689999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|+++||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 158 v~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14261 158 LCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLK-K-E-YTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQ 234 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-h-C-ceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHH
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999999999999999988
Q ss_pred HHh
Q 000224 1690 LKT 1692 (1833)
Q Consensus 1690 l~~ 1692 (1833)
+.+
T Consensus 235 ~~~ 237 (253)
T PRK14261 235 IFE 237 (253)
T ss_pred HHh
Confidence 764
No 418
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-39 Score=334.82 Aligned_cols=216 Identities=25% Similarity=0.389 Sum_probs=197.2
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCCh----H
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDP----K 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~----~ 1539 (1833)
+|++++++|.-+.+. +...+|++|+|.|++||.+||+||+|||||||+-+++|+..|++|+|++.|+++.+-. .
T Consensus 6 ii~~~~l~ktvg~~~--~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA 83 (228)
T COG4181 6 IIEVHHLSKTVGQGE--GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARA 83 (228)
T ss_pred eeehhhhhhhhcCCC--cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHH
Confidence 789999999987653 4677999999999999999999999999999999999999999999999999986522 1
Q ss_pred Hh-ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc
Q 000224 1540 AA-RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG 1618 (1833)
Q Consensus 1540 ~~-~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~ 1618 (1833)
.+ .+++|+|+|...|.|+||..||+.....++|-...+..+.+.++|+++||.+..+.++.+||||+||||+||||++.
T Consensus 84 ~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~ 163 (228)
T COG4181 84 ALRARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAG 163 (228)
T ss_pred HhhccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcC
Confidence 22 36899999999999999999999999999986666667778899999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEE
Q 000224 1619 DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRC 1683 (1833)
Q Consensus 1619 ~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~ 1683 (1833)
.|+|||-||||-+||-.+-+.+.+++-.++++.| +|.|++|||...+.+ |+|++-|.+|+++.
T Consensus 164 ~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G-~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~ 226 (228)
T COG4181 164 RPDVLFADEPTGNLDRATGDKIADLLFALNRERG-TTLVLVTHDPQLAAR-CDRQLRLRSGRLVE 226 (228)
T ss_pred CCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcC-ceEEEEeCCHHHHHh-hhheeeeecceecc
Confidence 9999999999999999999999999999987665 799999999988776 99999999999975
No 419
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-39 Score=377.88 Aligned_cols=219 Identities=23% Similarity=0.416 Sum_probs=194.3
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCC-----cceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPT-----TGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~-----~G~i~i~g~~i~~---~ 630 (1833)
.|+++|+++.|++ ..+++|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .
T Consensus 7 ~l~~~nl~~~~~~----~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 7 AIKVNNLSFYYDT----QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred eEEEeeEEEEeCC----eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 6999999999953 35999999999999999999999999999999999999996 8999999988742 2
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
...+++.++|+||++.+++ +|++||+.+.....+. +..+.++++.++++.+++.+ ..++.+.+||||||||++|
T Consensus 83 ~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 161 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCI 161 (261)
T ss_pred hHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHH
Confidence 3456788999999998888 8999999887655554 33445567889999999853 5688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeC-----CEEEeecCHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMAN-----GSLKCCGSSL 778 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~-----G~l~~~G~~~ 778 (1833)
||||+.+|++|||||||+|||+.+++.+++.|++++ +|+|||++||+++++..+||||++|++ |+++..|++.
T Consensus 162 aral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~ 241 (261)
T PRK14258 162 ARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFGLTK 241 (261)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeCCHH
Confidence 999999999999999999999999999999999974 489999999999999999999999999 9999999998
Q ss_pred HHHh
Q 000224 779 FLKH 782 (1833)
Q Consensus 779 ~Lk~ 782 (1833)
++..
T Consensus 242 ~~~~ 245 (261)
T PRK14258 242 KIFN 245 (261)
T ss_pred HHHh
Confidence 8743
No 420
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-39 Score=364.54 Aligned_cols=197 Identities=20% Similarity=0.281 Sum_probs=172.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC---CCceEEEEcCeeCCCChHH
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY---PTDGTAFIFGKDIRSDPKA 1540 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~---p~~G~i~i~G~~i~~~~~~ 1540 (1833)
.+.++|++|.|+.+. +++.+++++||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++......
T Consensus 3 ~~~~~~~~~~~~~~~--~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~ 80 (202)
T cd03233 3 TLSWRNISFTTGKGR--SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEK 80 (202)
T ss_pred eEEEEccEEEeccCC--CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhh
Confidence 478999999998642 35679999999999999999999999999999999999999 8999999999998654445
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
.++.+||+||++.+++.+|++||+.+..... .++++..||||||||++||+||+.+|
T Consensus 81 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral~~~p 137 (202)
T cd03233 81 YPGEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEALVSRA 137 (202)
T ss_pred hcceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHHhhCC
Confidence 6778999999998999899999997653211 56788999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
++|||||||+|||+.+++.+++.|++++++.+.++||+++|+++++..+|||+++|++|+++..|
T Consensus 138 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 138 SVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999865434334555667789999999999999999998654
No 421
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.3e-39 Score=374.35 Aligned_cols=204 Identities=27% Similarity=0.420 Sum_probs=182.1
Q ss_pred ceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC----CcceEEEcCccCCccHHHhhcceEEEccCCC--CCCCC
Q 000224 578 AVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP----TTGDALVFGKNITADMDEIRKGLGVCPQYDI--LFPEL 651 (1833)
Q Consensus 578 al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p----~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~--l~~~l 651 (1833)
+++|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +..++.+||++|++. +++.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCchhhcCccc
Confidence 57999999999999999999999999999999999999 899999999987532 233468999999984 55678
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC---cccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHH
Q 000224 652 TVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA---DKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPY 728 (1833)
Q Consensus 652 Tv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~---~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~ 728 (1833)
|+.||+.+.....+......++++.++++.+|+. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999998766554544445567899999999998 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 729 SMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 729 ~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+++.+++.|++++ .|+|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 160 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 160 NQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999985 38999999999999999999999999999999999988754
No 422
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=377.41 Aligned_cols=220 Identities=23% Similarity=0.395 Sum_probs=191.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~- 1536 (1833)
.+++++|++|.|++ +.+++|+||+|++||++||+|+||||||||+|+|+|+++| ++|+|.++|+++..
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (259)
T PRK14260 6 PAIKVKDLSFYYNT------SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDP 79 (259)
T ss_pred ceEEEEEEEEEECC------eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEecccc
Confidence 36899999999953 4599999999999999999999999999999999999985 58999999998753
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
.....++++||+||++.+++ +|++||+.+....++ .++.+..+.+.++++.+++. +..++++.+||||||||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 80 RININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQR 158 (259)
T ss_pred ccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHH
Confidence 22455678999999998887 899999987654443 23334455677888888873 46788999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-----CCEEEEe
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-----GGQLRCI 1684 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~-----~G~i~~~ 1684 (1833)
++|||||+.+|++|||||||+|||+.+++.+++.|++++ + + .|||++||+++++..+|||+++|+ +|++++.
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR-S-E-LTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 999999999999999999999999999999999999985 3 3 589999999999999999999998 5999999
Q ss_pred cChhHHHh
Q 000224 1685 GSPQHLKT 1692 (1833)
Q Consensus 1685 g~~~~l~~ 1692 (1833)
|+++++.+
T Consensus 236 ~~~~~~~~ 243 (259)
T PRK14260 236 GVTTQIFS 243 (259)
T ss_pred CCHHHHhc
Confidence 99998754
No 423
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.2e-39 Score=374.30 Aligned_cols=200 Identities=28% Similarity=0.430 Sum_probs=176.9
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHH
Q 000224 1486 VHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLE 1565 (1833)
Q Consensus 1486 l~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~ 1565 (1833)
++++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..... ..+|+||++.+++.+|++||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~----~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP----DRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh----hheEEecCcccCCCCCHHHHHH
Confidence 578999999999999999999999999999999999999999999998864221 2589999999999999999998
Q ss_pred HHHH--HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000224 1566 LYAR--IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEV 1643 (1833)
Q Consensus 1566 ~~~~--~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~ 1643 (1833)
+... ..+....+.++.+.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 7532 22344444556678899999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1644 ISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1644 l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
|++++++.| +|||++||+++++..+|||+++|++|++++.|++.++
T Consensus 157 l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 157 LMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 999865444 5899999999999999999999999999988876554
No 424
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-39 Score=375.63 Aligned_cols=223 Identities=22% Similarity=0.379 Sum_probs=193.6
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcC------eeCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFG------KDIR 1535 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G------~~i~ 1535 (1833)
.+++.++|++|+|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++| .++.
T Consensus 8 ~~~i~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~ 81 (257)
T PRK14246 8 EDVFNISRLYLYIND------KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIF 81 (257)
T ss_pred hhheeeeeEEEecCC------ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccc
Confidence 467999999999963 5699999999999999999999999999999999999999997777666 4443
Q ss_pred C-ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCC-ChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHH
Q 000224 1536 S-DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGV-AEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRK 1609 (1833)
Q Consensus 1536 ~-~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~-~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqr 1609 (1833)
. .....++.+||+||++.+++.+|++||+.+.....+. ++.+..+.+.++++.+++. +..++++..||||||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 82 QIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred cCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 2 3345678899999999999889999999887554443 2334556678889999985 35688999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhH
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQH 1689 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~ 1689 (1833)
++|||||+.+|++++|||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|++++
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~ 238 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELK-N-E-IAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNE 238 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-cEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999984 3 3 689999999999999999999999999999999988
Q ss_pred HHhh
Q 000224 1690 LKTR 1693 (1833)
Q Consensus 1690 l~~~ 1693 (1833)
+.++
T Consensus 239 ~~~~ 242 (257)
T PRK14246 239 IFTS 242 (257)
T ss_pred HHhC
Confidence 7643
No 425
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=379.41 Aligned_cols=219 Identities=25% Similarity=0.386 Sum_probs=191.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..|+++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 19 ~~l~~~nl~~~~~~----~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 19 SVFEVEGVKVFYGG----FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred ceEEEeeEEEEeCC----eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 47999999999953 4699999999999999999999999999999999999863 69999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
.....++++||+||++.+++. |+.||+.+....++... ..++.+.++++.+++. +..++++.+|||||||||+|
T Consensus 95 ~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~L 172 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYKG-NLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCI 172 (274)
T ss_pred hhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCchH-HHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHH
Confidence 233567889999999988875 99999988655444322 2345677888888873 45688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEee---------CCEEEeecC
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA---------NGSLKCCGS 776 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~---------~G~l~~~G~ 776 (1833)
||||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|+ +|++++.|+
T Consensus 173 AraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~ 252 (274)
T PRK14265 173 ARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFSP 252 (274)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999999878999999999999999999999997 899999999
Q ss_pred HHHHHh
Q 000224 777 SLFLKH 782 (1833)
Q Consensus 777 ~~~Lk~ 782 (1833)
+.++..
T Consensus 253 ~~~~~~ 258 (274)
T PRK14265 253 TEQMFG 258 (274)
T ss_pred HHHHHh
Confidence 877743
No 426
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.7e-39 Score=366.94 Aligned_cols=200 Identities=27% Similarity=0.361 Sum_probs=181.6
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++|+++.|++ +.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......+++++
T Consensus 2 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~ 77 (204)
T PRK13538 2 LEARNLACERDE----RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLL 77 (204)
T ss_pred eEEEEEEEEECC----EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheE
Confidence 789999999953 4699999999999999999999999999999999999999999999999988654445677899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
+++|++.+++.+|+.||+.+.....+. ..+++++++++.+||.+..++++++||||||||++||+||+.+|+++|||
T Consensus 78 ~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllD 154 (204)
T PRK13538 78 YLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLWILD 154 (204)
T ss_pred EeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999999987655442 23467889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEe
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 766 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im 766 (1833)
|||+|||+.+++.++++|++++ +|+|||++||++++++...+|++.+
T Consensus 155 EPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 155 EPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999985 5899999999999999988888776
No 427
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=378.40 Aligned_cols=220 Identities=24% Similarity=0.378 Sum_probs=192.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~~ 1537 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 20 ~~l~i~nl~~~~~~------~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~ 93 (276)
T PRK14271 20 PAMAAVNLTLGFAG------KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNY 93 (276)
T ss_pred cEEEEeeEEEEECC------EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEcccc
Confidence 47999999999953 4699999999999999999999999999999999999986 799999999988542
Q ss_pred --hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcC-CChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000224 1538 --PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKG-VAEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1538 --~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g-~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqrl 1610 (1833)
....+++++|+||++.+++ +|++||+.+.....+ .+..+..+.+.++++.+++.+ ..++.+.+||||||||+
T Consensus 94 ~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 94 RDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred chhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 3356778999999998887 899999987543322 233444456677889999863 35788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|||||||+|||+.+++.+.+.|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLA-D-R-LTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999985 3 3 5899999999999999999999999999999999988
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
.+
T Consensus 250 ~~ 251 (276)
T PRK14271 250 FS 251 (276)
T ss_pred Hh
Confidence 64
No 428
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5e-39 Score=377.10 Aligned_cols=216 Identities=26% Similarity=0.399 Sum_probs=190.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC----CcceEEEcCccCCccHHHh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP----TTGDALVFGKNITADMDEI 634 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p----~~G~i~i~g~~i~~~~~~~ 634 (1833)
.++++||+|.| + +.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. ....
T Consensus 4 ~l~~~~l~~~~-~----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~-~~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A----QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP-CALR 77 (254)
T ss_pred EEEEeCeEEEe-c----cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc-cccc
Confidence 58999999999 2 2599999999999999999999999999999999999999 99999999998752 2223
Q ss_pred hcceEEEccCCC--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc---ccccccCCCChhHHHHHHHHHHH
Q 000224 635 RKGLGVCPQYDI--LFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD---KVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 635 r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~---~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
++.+||+||++. +.+.+|+.+++.......+... .++++.++++.++|.+ ..++.+.+|||||||||+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral 155 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPA--DDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALAL 155 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCCh--HHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHH
Confidence 467999999974 4456799999877655445433 2467899999999987 46899999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+.+|++|||||||+|||+.+++.++++|+++. + |+|||++||+++++..+|||+++|++|+++..|++.++.+
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 156 LCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred hcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999984 3 8999999999999999999999999999999999877753
No 429
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=376.41 Aligned_cols=219 Identities=26% Similarity=0.374 Sum_probs=193.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~~--- 629 (1833)
..+.++++++.|+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 7 ~~~~~~~~~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 82 (261)
T PRK14263 7 IVMDCKLDKIFYG----NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGV 82 (261)
T ss_pred ceEEEEeEEEEeC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEecccccc
Confidence 5789999999994 34699999999999999999999999999999999999987 79999999998742
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc----ccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLAD----KVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~----~~~~~~~~LSgGqkqrl~l 705 (1833)
.....++.+||+||++.++ .+|+.||+.+.....+.. .+.++++.++++.++|.+ ..++++++||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 83 DPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred chHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHH
Confidence 2235677899999999888 589999999876554432 345678899999999854 3467789999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEee--------CCEEEeecCH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMA--------NGSLKCCGSS 777 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~--------~G~l~~~G~~ 777 (1833)
||||+.+|++|||||||+|||+.++++++++|+++++++|||++||+++++..+||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999999878999999999999999999999996 8999999998
Q ss_pred HHHHh
Q 000224 778 LFLKH 782 (1833)
Q Consensus 778 ~~Lk~ 782 (1833)
.++.+
T Consensus 241 ~~~~~ 245 (261)
T PRK14263 241 AQIFQ 245 (261)
T ss_pred HHHHh
Confidence 87753
No 430
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=384.82 Aligned_cols=225 Identities=24% Similarity=0.432 Sum_probs=193.8
Q ss_pred CCcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeC
Q 000224 1460 VDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDI 1534 (1833)
Q Consensus 1460 ~~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i 1534 (1833)
+...+|+++|++++|.+ +.+.+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|.++
T Consensus 76 ~~~~~i~~~nls~~y~~----~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i 151 (329)
T PRK14257 76 NHANVFEIRNFNFWYMN----RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNT 151 (329)
T ss_pred CcCceEEEEeeEEEecC----CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 34458999999999963 23469999999999999999999999999999999999986 5799999999998
Q ss_pred CC---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhh-HHHHHHHHHHHcCCc----cccCCCCCCCChhH
Q 000224 1535 RS---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYR-MDDVVMEKLVEFDLL----KHAKKPSFTLSGGN 1606 (1833)
Q Consensus 1535 ~~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~-~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~ 1606 (1833)
.. ....+|+.+|||||++.++. .|++||+.+.....+...++ .++.+.+.++.++|. ...++++.+|||||
T Consensus 152 ~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 152 RSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred cccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHH
Confidence 63 22456788999999998885 79999998755444443332 234467778888773 35688999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
||||+|||||+.+|+||||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+||||++|++|++++.|+
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~-~-~-~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELK-K-K-YSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 3 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
++++.+
T Consensus 308 ~~~l~~ 313 (329)
T PRK14257 308 TKTIFI 313 (329)
T ss_pred HHHHhc
Confidence 999864
No 431
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-39 Score=374.04 Aligned_cols=220 Identities=24% Similarity=0.393 Sum_probs=185.1
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.|+++|+++.|++ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++.
T Consensus 2 ~l~~~~l~~~~~~---~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 2 EIEFENVNFSYDE---KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred eEEEEEEEEecCC---CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 3789999999953 2359999999999999999999999999999999999999999999999988753 34456788
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHh
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALI 710 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~-----~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al~ 710 (1833)
+||+||++.+++. |++||+.++.... ......+ .+.+.++.+ |+....++.+.+|||||||||+||+||+
T Consensus 79 i~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~ 155 (229)
T cd03254 79 IGVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAML 155 (229)
T ss_pred EEEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHh
Confidence 9999999988876 9999998753211 1111111 123344443 5555667778999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 711 GDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 711 ~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
.+|+++||||||+|||+.+++.+++.|+++++|+|||++||+++++.. |||+++|++|+++..|+.+++..++|
T Consensus 156 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~~~~~~~~~~ 229 (229)
T cd03254 156 RDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKN-ADKILVLDDGKIIEEGTHDELLAKKG 229 (229)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEEeCCeEEEeCCHHHHHhhCC
Confidence 999999999999999999999999999999779999999999999975 99999999999999999877766543
No 432
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.5e-39 Score=371.54 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=184.1
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHH
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKA 1540 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~ 1540 (1833)
+++|+++||+|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....
T Consensus 5 ~~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~ 78 (225)
T PRK10247 5 SPLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEI 78 (225)
T ss_pred CceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHH
Confidence 347999999999953 459999999999999999999999999999999999999999999999998864 3445
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc-cccCCCCCCCChhHHHHHHHHHHHhcC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL-KHAKKPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~-~~~~~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
.++.+||+||++.+++ .|++||+.+....++... .++.+.++++.+++. ...++++.+|||||||||+||+||+.+
T Consensus 79 ~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (225)
T PRK10247 79 YRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQQP--DPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFM 155 (225)
T ss_pred HHhccEEEeccccccc-ccHHHHHHhHHhhcCCCh--HHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 6778999999988887 599999987654443221 234567899999996 568999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE-CCEEEEecC
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV-GGQLRCIGS 1686 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~-~G~i~~~g~ 1686 (1833)
|+++||||||+|||+.+++.+.+.|++++++.| +|||++||++++++ .|||+++|+ ++..+.+|+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~~~~ 221 (225)
T PRK10247 156 PKVLLLDEITSALDESNKHNVNEIIHRYVREQN-IAVLWVTHDKDEIN-HADKVITLQPHAGEMQEAR 221 (225)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECChHHHH-hCCEEEEEecccchHhhhh
Confidence 999999999999999999999999999865444 58999999999997 599999995 555555554
No 433
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-39 Score=376.39 Aligned_cols=219 Identities=24% Similarity=0.418 Sum_probs=183.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
++++|+++.|+++ .+.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 i~~~~l~~~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPD----GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCC----CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 4689999999632 2469999999999999999999999999999999999999999999999998754 3345677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.+||+||++.+++ .|++||+.+... +.......+ ...++++.+ ++....++++.+|||||||||+|||||
T Consensus 77 ~i~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral 153 (237)
T cd03252 77 QVGVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARAL 153 (237)
T ss_pred cEEEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 8999999988775 699999976421 222211111 122344444 555567789999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
+.+|++|||||||+|||+.+++.+++.|++++ + | +|||++||++++++ .|||+++|++|+++..|+++++.++.
T Consensus 154 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (237)
T cd03252 154 IHNPRILIFDEATSALDYESEHAIMRNMHDIC-A-G-RTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSHDELLAEN 227 (237)
T ss_pred hhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-C-C-CEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCHHHHHhcc
Confidence 99999999999999999999999999999984 3 4 68999999999996 59999999999999999999887653
No 434
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=374.85 Aligned_cols=218 Identities=24% Similarity=0.429 Sum_probs=188.8
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCCC--
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRSD-- 1537 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~~-- 1537 (1833)
-+++|+++.|+ ++.+++|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++...
T Consensus 6 ~~~~~l~~~~~------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 79 (251)
T PRK14244 6 ASVKNLNLWYG------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDT 79 (251)
T ss_pred EEeeeEEEEEC------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhccc
Confidence 36899999995 2469999999999999999999999999999999999986 5799999999987531
Q ss_pred -hHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC--hhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000224 1538 -PKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA--EYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1538 -~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~--~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqrl 1610 (1833)
....++.+||+||++.+++. |++||+.+....++.. ....++.+.++++.+++.+ ..++++.+||||||||+
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 80 NVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred chHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHH
Confidence 23457789999999988875 9999998764444432 2334456778899999964 46788999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|+++. + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-K-N-FTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 6899999999999999999999999999999999887
Q ss_pred Hh
Q 000224 1691 KT 1692 (1833)
Q Consensus 1691 ~~ 1692 (1833)
.+
T Consensus 236 ~~ 237 (251)
T PRK14244 236 FK 237 (251)
T ss_pred hc
Confidence 64
No 435
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=414.48 Aligned_cols=220 Identities=25% Similarity=0.369 Sum_probs=194.9
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC--CceEEEEcCeeCCCCh-H
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--TDGTAFIFGKDIRSDP-K 1539 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p--~~G~i~i~G~~i~~~~-~ 1539 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++| ++|+|.++|.++.... .
T Consensus 4 ~~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~ 77 (506)
T PRK13549 4 YLLEMKNITKTFGG------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIR 77 (506)
T ss_pred ceEEEeeeEEEeCC------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHH
Confidence 47999999999952 4699999999999999999999999999999999999996 8999999999986532 2
Q ss_pred -HhccceEEEecCCCCCCCCCHHHHHHHHHHHc--C-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000224 1540 -AARRLIGYCPQFDALLEYLTVQEHLELYARIK--G-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1540 -~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
..++.+||+||++.+++.+|++||+.+....+ + .+.++..+++.++++.+++.+..++++++|||||||||+||+|
T Consensus 78 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 78 DTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred HHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 24577999999998999999999998765432 2 2333445678899999999888999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
|+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-~~~-~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLK-AHG-IACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-HCC-CEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 999999999999999999999999999999996 344 5899999999999999999999999999999988765
No 436
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-39 Score=374.11 Aligned_cols=220 Identities=25% Similarity=0.430 Sum_probs=186.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
++++|+++.|++. ++.+++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 i~~~~l~~~~~~~----~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (234)
T cd03251 1 VEFKNVTFRYPGD----GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRR 76 (234)
T ss_pred CEEEEEEEEeCCC----CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHh
Confidence 4689999999642 2358999999999999999999999999999999999999999999999998754 3445677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.+||+||++.+++ .|++||+.+.... .......+ .+.+.++.+ ++....++++.+||||||||++||+||
T Consensus 77 ~i~~~~q~~~~~~-~tv~enl~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al 153 (234)
T cd03251 77 QIGLVSQDVFLFN-DTVAENIAYGRPG--ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARAL 153 (234)
T ss_pred hEEEeCCCCeecc-ccHHHHhhccCCC--CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHH
Confidence 8999999998886 6999999765321 11111111 234455555 677778889999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
+.+|+++||||||+|||+.+++.+++.|++++ + + .|||++||++++++. |||+++|++|++++.|+++++..+.+
T Consensus 154 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 154 LKDPPILILDEATSALDTESERLVQAALERLM-K-N-RTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEecCHHHHhh-CCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 99999999999999999999999999999984 3 4 589999999999986 99999999999999999998876653
No 437
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=373.51 Aligned_cols=221 Identities=23% Similarity=0.410 Sum_probs=190.5
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC--C---CceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY--P---TDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~--p---~~G~i~i~G~~i~~ 1536 (1833)
+.+|+++|++|.|+. +.+++++||+|++||++||+|+||||||||+++|+|+.+ | ++|+|.++|.++..
T Consensus 3 ~~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~ 76 (252)
T PRK14255 3 KKIITSSDVHLFYGK------FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYA 76 (252)
T ss_pred cceEEEEeEEEEECC------eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEccc
Confidence 357999999999962 469999999999999999999999999999999999975 5 59999999998853
Q ss_pred ---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCCh-hhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1537 ---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAE-YRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1537 ---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~-~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
.....++.+||+||++.+++ .|++||+.+....++... +..++.+.+.++.+++. +..++.+.+|||||||
T Consensus 77 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 77 PNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQ 155 (252)
T ss_pred ccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHH
Confidence 23345678999999998887 799999987655555432 22344566778888763 4578899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++||+||+.+|++|||||||+|||+.+++.+.+.|++++ + + .|||++||+++++..+||||++|++|+++..|++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELR-D-Q-YTIILVTHSMHQASRISDKTAFFLTGNLIEFADTK 232 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHH-h-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999985 3 3 58999999999999999999999999999999988
Q ss_pred HHHh
Q 000224 1689 HLKT 1692 (1833)
Q Consensus 1689 ~l~~ 1692 (1833)
++..
T Consensus 233 ~~~~ 236 (252)
T PRK14255 233 QMFL 236 (252)
T ss_pred HHhc
Confidence 8754
No 438
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=414.81 Aligned_cols=220 Identities=27% Similarity=0.394 Sum_probs=194.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~- 1540 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... ...
T Consensus 4 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~ 77 (510)
T PRK09700 4 PYISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLA 77 (510)
T ss_pred ceEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHH
Confidence 47999999999953 4699999999999999999999999999999999999999999999999998653 222
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH----HcCC---ChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHH
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR----IKGV---AEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVA 1613 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~----~~g~---~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA 1613 (1833)
.++++||+||++.+++.+||+||+.+... ..+. +..+.++++.++++.+||.+..++++++|||||||||+||
T Consensus 78 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 78 AQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred HHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 34679999999989999999999976432 1222 2234456788899999999889999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1614 IAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1614 ~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+||+.+|++|||||||+|||+.+++.+++.|+++++ +| +|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 999999999999999999999999999999999964 44 6899999999999999999999999999999988764
No 439
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4e-39 Score=366.34 Aligned_cols=201 Identities=28% Similarity=0.494 Sum_probs=177.4
Q ss_pred EEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-C----hHHh
Q 000224 1467 LRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-D----PKAA 1541 (1833)
Q Consensus 1467 v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~----~~~~ 1541 (1833)
++|+++.|++ +.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. . ....
T Consensus 1 i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 74 (206)
T TIGR03608 1 LKNISKKFGD------KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFR 74 (206)
T ss_pred CcceEEEECC------EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHH
Confidence 4689999952 459999999999999999999999999999999999999999999999998642 1 1235
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++.+||++|++.+++.+|++||+.+.....+....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|+
T Consensus 75 ~~~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~ 154 (206)
T TIGR03608 75 REKLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPP 154 (206)
T ss_pred HhCeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999999889999999986655555555556678899999999888999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1676 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im 1676 (1833)
+|||||||+|||+.+++.+++.|+++.+ +| .|||++||++++++ +|||+++|
T Consensus 155 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~-~~d~i~~l 206 (206)
T TIGR03608 155 LILADEPTGSLDPKNRDEVLDLLLELND-EG-KTIIIVTHDPEVAK-QADRVIEL 206 (206)
T ss_pred EEEEeCCcCCCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHh-hcCEEEeC
Confidence 9999999999999999999999999864 44 58999999999764 79999875
No 440
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-39 Score=376.91 Aligned_cols=219 Identities=25% Similarity=0.421 Sum_probs=189.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~- 1536 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 9 ~~l~i~~v~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS------FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC------EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 47999999999953 468999999999999999999999999999999999986 489999999998742
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++++||++|++.+++ .|+.||+.+.....+.. ...++++.++++.+++. +..++++.+||||||||+
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred ccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHH
Confidence 33456778999999988887 59999998765444432 22344566777877774 356889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE---------CCEE
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV---------GGQL 1681 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~---------~G~i 1681 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|+ +|++
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i 237 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELK-E-Q-YTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYL 237 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CEEEEEecCHHHHHHhCCEEEEEecccccccccCceE
Confidence 99999999999999999999999999999999999985 3 3 589999999999999999999998 8999
Q ss_pred EEecChhHHHh
Q 000224 1682 RCIGSPQHLKT 1692 (1833)
Q Consensus 1682 ~~~g~~~~l~~ 1692 (1833)
++.|+++++.+
T Consensus 238 ~~~~~~~~~~~ 248 (264)
T PRK14243 238 VEFDRTEKIFN 248 (264)
T ss_pred EEeCCHHHHHh
Confidence 99999999864
No 441
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=9.3e-39 Score=374.92 Aligned_cols=221 Identities=23% Similarity=0.395 Sum_probs=189.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCcc-----CCc-cH
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKN-----ITA-DM 631 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~-----i~~-~~ 631 (1833)
+.|+++||++.|++ ..+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +.. ..
T Consensus 2 ~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (253)
T TIGR02323 2 PLLQVSGLSKSYGG----GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSE 77 (253)
T ss_pred ceEEEeeeEEEeCC----ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCH
Confidence 36899999999953 358999999999999999999999999999999999999999999999976 532 22
Q ss_pred H----HhhcceEEEccCCC--CCCCCCHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHH
Q 000224 632 D----EIRKGLGVCPQYDI--LFPELTVREHLEMFAVLKG-VKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKL 703 (1833)
Q Consensus 632 ~----~~r~~ig~~~Q~~~--l~~~lTv~e~l~~~~~~~~-~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl 703 (1833)
. ..++.+||++|++. +++.+|+.||+.......+ ......++++.++++.+|+. +..++.+++||||||||+
T Consensus 78 ~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv 157 (253)
T TIGR02323 78 AERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRL 157 (253)
T ss_pred HHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHH
Confidence 1 13467999999974 4566799999875432111 12223457889999999997 478999999999999999
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 704 SLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 704 ~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+|||||+.+|++|||||||+|||+.+++.++++|+++. + |.|||++||+++++..+|||+++|++|+++..|++.++.
T Consensus 158 ~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 158 QIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999999999999999999999874 3 899999999999999999999999999999999887765
Q ss_pred h
Q 000224 782 H 782 (1833)
Q Consensus 782 ~ 782 (1833)
.
T Consensus 238 ~ 238 (253)
T TIGR02323 238 D 238 (253)
T ss_pred c
Confidence 3
No 442
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.4e-39 Score=377.62 Aligned_cols=223 Identities=27% Similarity=0.359 Sum_probs=195.0
Q ss_pred eEEEEeeEEEecCC-----CCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc----
Q 000224 559 CIQIRKLHKVYATK-----RGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA---- 629 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~-----~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~---- 629 (1833)
.|+++||+|.|+.. ..++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 58999999999631 013569999999999999999999999999999999999999999999999998753
Q ss_pred cHHHhhcceEEEccCC--CCCCCCCHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHH
Q 000224 630 DMDEIRKGLGVCPQYD--ILFPELTVREHLEMFAV-LKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~--~l~~~lTv~e~l~~~~~-~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~l 705 (1833)
.....++.+||+||++ .+++..|+.|++.+... ..+....+..++++++++.+|+. ...++.+.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 1234577899999997 46678899999876543 23444555566889999999997 57899999999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
||||+.+|++|||||||+|||+.+++.+.++|++++ + |+|+|++||+++++..+|||+++|++|+++..|++.++.
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999985 3 899999999999999999999999999999999987764
No 443
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=338.31 Aligned_cols=216 Identities=26% Similarity=0.439 Sum_probs=199.6
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
++.+++++-+|++. ...+++|+|++|.+||.+.++||+|||||||+++++|+.+|+.|+|.++|+.+.....
T Consensus 3 ~l~~~~~sl~y~g~----~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga---- 74 (259)
T COG4525 3 MLNVSHLSLSYEGK----PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA---- 74 (259)
T ss_pred eeehhheEEecCCc----chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc----
Confidence 46788999999753 2569999999999999999999999999999999999999999999999999875432
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
.-|+|+|+++|+|.+++.||+.|..+++|+++.+..+.+.+.+..+||.+..++.+.+||||||||+.|||||+.+|++|
T Consensus 75 ergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 75 ERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred cceeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceE
Confidence 35899999999999999999999999999999988889999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--CCEEEEecChh
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--GGQLRCIGSPQ 1688 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~--~G~i~~~g~~~ 1688 (1833)
+||||..+||.-+|+.+.++|.++.++.| +.++++|||.||+--+++|+++|+ .|++++.-+++
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999999999999999999887776 479999999999999999999997 57898877665
No 444
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-39 Score=374.04 Aligned_cols=219 Identities=26% Similarity=0.417 Sum_probs=194.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---c
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA---D 630 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~---~ 630 (1833)
.++++||++.|++ +.+++|+||+|.+||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++.. +
T Consensus 3 ~l~~~~v~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 78 (250)
T PRK14266 3 RIEVENLNTYFDD----AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVD 78 (250)
T ss_pred EEEEEeEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccccc
Confidence 4889999999952 469999999999999999999999999999999999864 489999999998753 3
Q ss_pred HHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC----cccccccCCCChhHHHHHHH
Q 000224 631 MDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGV-KEELLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 631 ~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~-~~~~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqrl~l 705 (1833)
....++++|||||++.+|+. |+.||+.+.....+. +.+..++++.++++.+|+. +..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 79 VVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCI 157 (250)
T ss_pred HHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHH
Confidence 44567889999999998885 999999876544443 3345677889999999984 34688899999999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|++.++..
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFI 234 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999888754
No 445
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.2e-39 Score=364.56 Aligned_cols=202 Identities=28% Similarity=0.392 Sum_probs=180.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhcc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARR 1543 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~ 1543 (1833)
+++++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++
T Consensus 1 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~ 74 (204)
T PRK13538 1 MLEARNLACERDE------RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQ 74 (204)
T ss_pred CeEEEEEEEEECC------EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhh
Confidence 4789999999953 4599999999999999999999999999999999999999999999999998654455677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIV 1623 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vl 1623 (1833)
+++|++|++.+++.+|++||+.+....++. ..+++++++++.+||.+..++++.+||||||||++||+||+.+|++|
T Consensus 75 ~~~~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 151 (204)
T PRK13538 75 DLLYLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLW 151 (204)
T ss_pred heEEeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 899999999898889999999987655442 23456788999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000224 1624 ILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1676 (1833)
Q Consensus 1624 lLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im 1676 (1833)
+|||||+|||+.+++.+++.|++++ ++| .|||++||+++++++..+|++.+
T Consensus 152 llDEPt~~LD~~~~~~l~~~l~~~~-~~~-~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 152 ILDEPFTAIDKQGVARLEALLAQHA-EQG-GMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHH-HCC-CEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999999986 344 58999999999999977787665
No 446
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-39 Score=375.74 Aligned_cols=220 Identities=27% Similarity=0.432 Sum_probs=185.0
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++|+++.|++.+ ++.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 1 l~i~~l~~~~~~~~-~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (238)
T cd03249 1 IEFKNVSFRYPSRP-DVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQI 79 (238)
T ss_pred CeEEEEEEecCCCC-CccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhE
Confidence 46899999996421 2469999999999999999999999999999999999999999999999988753 334456789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~-----~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
||+||++.+++ .||+||+.+....+ ..++..+ .+.+.++.+ ++....++.+.+||||||||++||+||+.
T Consensus 80 ~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~ 156 (238)
T cd03249 80 GLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLR 156 (238)
T ss_pred EEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhc
Confidence 99999998886 69999998753221 1122111 123344444 56666788899999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 784 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~ 784 (1833)
+|+++||||||+|||+.+++.+++.|+++++|+|||++||+++++. .|||+++|++|+++..|+..++....
T Consensus 157 ~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 157 NPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 9999999999999999999999999999878899999999999997 79999999999999999987776543
No 447
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=376.11 Aligned_cols=220 Identities=28% Similarity=0.412 Sum_probs=193.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCC-----CcceEEEcCccCC---c
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPP-----TTGDALVFGKNIT---A 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~g~~i~---~ 629 (1833)
..|+++||+|.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++. .
T Consensus 15 ~~l~~~~l~~~~~~----~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 15 QKSEVNKLNFYYGG----YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred ceEEEEEEEEEECC----eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 46999999999953 3699999999999999999999999999999999999975 7999999998763 1
Q ss_pred --cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHcCCC----cccccccCCCChhHHHH
Q 000224 630 --DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEE-LLESVVAEMVDEVGLA----DKVNIVVRALSGGMKRK 702 (1833)
Q Consensus 630 --~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~-~~~~~v~~~l~~~~L~----~~~~~~~~~LSgGqkqr 702 (1833)
.....++.+||+||++.+++. |++||+.+.....+.... ..++++.++++.+++. +..++.+.+||||||||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 169 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQR 169 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHH
Confidence 234567889999999999986 999999877655555432 3456788889988874 45678899999999999
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 703 LSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 703 l~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
++|||||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+++|++|++++.|+..++..
T Consensus 170 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 249 (265)
T PRK14252 170 LCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATDTIFI 249 (265)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999999878999999999999999999999999999999999877653
No 448
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.8e-39 Score=369.12 Aligned_cols=201 Identities=24% Similarity=0.402 Sum_probs=179.1
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
+.++++++.|+ ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++..
T Consensus 23 l~~~~~~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---------- 88 (224)
T cd03220 23 LGILGRKGEVG----EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL---------- 88 (224)
T ss_pred hhhhhhhhhcC----CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh----------
Confidence 77888899884 4579999999999999999999999999999999999999999999999986521
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
..+...+++.+||+||+.+.....+.+..+.++++.++++.+|+.+..++++++||||||||++|||||+.+|+++|||
T Consensus 89 -~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllD 167 (224)
T cd03220 89 -LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLID 167 (224)
T ss_pred -hcccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 1122345567899999998776666655666678899999999999899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
|||+|||+.+++.+++.|++++ +|+|||++||+++++..+|||+++|++|++++.|
T Consensus 168 EP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 168 EVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999985 5799999999999999999999999999998765
No 449
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-39 Score=420.63 Aligned_cols=218 Identities=27% Similarity=0.442 Sum_probs=191.7
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..|+++|++++|+... ..+|+|+||+|++||.+||+|+||||||||+|+|+|+++|++|+|++||+|+.. +....|+
T Consensus 470 g~I~~~nvsf~y~~~~--~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 470 GEIEFENVSFRYGPDD--PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred ceEEEEEEEEEeCCCC--cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 3699999999997643 369999999999999999999999999999999999999999999999999964 7889999
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-----------cccccccCCCChhHHHHHHH
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-----------DKVNIVVRALSGGMKRKLSL 705 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-----------~~~~~~~~~LSgGqkqrl~l 705 (1833)
+||||+|++.+|.. |++||+.++.. ..+ .+++.++++..|.. .........||||||||++|
T Consensus 548 ~ig~V~Q~~~Lf~g-SI~eNi~l~~p--~~~----~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal 620 (709)
T COG2274 548 QVGYVLQDPFLFSG-SIRENIALGNP--EAT----DEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL 620 (709)
T ss_pred heeEEcccchhhcC-cHHHHHhcCCC--CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 99999999999987 99999987531 112 23444444444333 33344556899999999999
Q ss_pred HHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhC
Q 000224 706 GIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYG 785 (1833)
Q Consensus 706 A~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g 785 (1833)
||||+.+|+|||||||||+||+.+.+.+.+.|.++.+|+|+|++||++..+. .||||+||++|+++.+|++++|.+.-|
T Consensus 621 ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~-~adrIiVl~~Gkiv~~gs~~ell~~~g 699 (709)
T COG2274 621 ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIR-SADRIIVLDQGKIVEQGSHEELLAQGG 699 (709)
T ss_pred HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhh-hccEEEEccCCceeccCCHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999997 599999999999999999999998833
No 450
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.1e-39 Score=411.40 Aligned_cols=217 Identities=25% Similarity=0.395 Sum_probs=193.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC-hHH-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD-PKA- 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~-~~~- 1540 (1833)
++|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 47999999999953 4599999999999999999999999999999999999999999999999988652 233
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
.++.+||+||++.+++.+||+||+.+.... ..+.++++.++++.++|.+..++++++|||||||||+||+||+.+|
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p 159 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDS 159 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCC
Confidence 235699999999999999999999874321 1234566788999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
++|||||||+|||+.+++.+++.|+++++ +| +|||++|||+++++.+||||++|++|++++.|+++++.
T Consensus 160 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (510)
T PRK15439 160 RILILDEPTASLTPAETERLFSRIRELLA-QG-VGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLS 228 (510)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcC
Confidence 99999999999999999999999999864 44 58999999999999999999999999999999987663
No 451
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.7e-39 Score=372.39 Aligned_cols=195 Identities=32% Similarity=0.478 Sum_probs=175.6
Q ss_pred eeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceEEEccCCCCCCCCCHHHHHH
Q 000224 579 VNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLE 658 (1833)
Q Consensus 579 l~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~ 658 (1833)
++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ...+|+||++.+++.+||+||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~----~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPG----PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCC----hhheEEecCcccCCCCCHHHHHH
Confidence 57999999999999999999999999999999999999999999999875321 12489999999999999999998
Q ss_pred HHHH--hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHH
Q 000224 659 MFAV--LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQL 736 (1833)
Q Consensus 659 ~~~~--~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~ 736 (1833)
++.. ..+.+..+.++++.++++.+||.+..++++++||||||||++|||||+.+|++|||||||+|||+.+++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 7632 23445555667789999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHh--CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCH
Q 000224 737 IKKIK--KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSS 777 (1833)
Q Consensus 737 l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~ 777 (1833)
|+++. .|+|||++||+++++..+||||++|++|++++.|+.
T Consensus 157 l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 199 (230)
T TIGR01184 157 LMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQI 199 (230)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCc
Confidence 99874 389999999999999999999999999999988764
No 452
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.4e-39 Score=378.71 Aligned_cols=212 Identities=24% Similarity=0.441 Sum_probs=189.8
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
|+++||++.|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|+++|.++.. +...+|+.|
T Consensus 3 i~~~nls~~~~~~--~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 3 MTVKDLTAKYTEG--GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred EEEEEEEEEeCCC--CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 8899999999642 2359999999999999999999999999999999999998 79999999998853 456678899
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCC-----------CChhHHHHHHHHH
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRA-----------LSGGMKRKLSLGI 707 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~-----------LSgGqkqrl~lA~ 707 (1833)
+||||++.+|+. |++||+..+. ... ++++.++++.+||.+..++.+.. ||||||||++|||
T Consensus 80 ~~v~q~~~lf~~-tv~~nl~~~~---~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaR 151 (275)
T cd03289 80 GVIPQKVFIFSG-TFRKNLDPYG---KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLAR 151 (275)
T ss_pred EEECCCcccchh-hHHHHhhhcc---CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHH
Confidence 999999999975 9999996432 122 24677888999998888887776 9999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhh
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQ 783 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~ 783 (1833)
||+.+|++|||||||++||+.+++.+.+.|++..+++|||++||+++++.. ||||++|++|+++..|++.+|.+.
T Consensus 152 all~~p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~l~~~ 226 (275)
T cd03289 152 SVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQKLLNE 226 (275)
T ss_pred HHhcCCCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHHHhhC
Confidence 999999999999999999999999999999998789999999999999975 999999999999999999998763
No 453
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=375.93 Aligned_cols=221 Identities=22% Similarity=0.404 Sum_probs=189.8
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~ 1535 (1833)
..++|+++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++.
T Consensus 17 ~~~~l~~~nl~~~~~~------~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~ 90 (274)
T PRK14265 17 DHSVFEVEGVKVFYGG------FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIY 90 (274)
T ss_pred CCceEEEeeEEEEeCC------eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecc
Confidence 4468999999999953 4699999999999999999999999999999999999863 6999999999885
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHH
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kq 1608 (1833)
. .....+++|||+||++.+++ .|+.||+.+....++... ..++.+.+.++.+++. +..++++.+|||||||
T Consensus 91 ~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 91 DSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANGYKG-NLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQ 168 (274)
T ss_pred cccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcCchH-HHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHH
Confidence 3 23345778999999988887 499999987654443321 2334456677887763 4568899999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE---------CC
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV---------GG 1679 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~---------~G 1679 (1833)
||+|||||+.+|++|||||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|+ +|
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G 245 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELK-E-Q-YTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRG 245 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-C-CEEEEEeCCHHHHHHhCCEEEEEecccccccccCc
Confidence 9999999999999999999999999999999999999985 3 3 589999999999999999999998 89
Q ss_pred EEEEecChhHHHh
Q 000224 1680 QLRCIGSPQHLKT 1692 (1833)
Q Consensus 1680 ~i~~~g~~~~l~~ 1692 (1833)
++++.|+++++..
T Consensus 246 ~~~~~g~~~~~~~ 258 (274)
T PRK14265 246 KLVEFSPTEQMFG 258 (274)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999988754
No 454
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=372.62 Aligned_cols=219 Identities=25% Similarity=0.420 Sum_probs=191.3
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC-
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS- 1536 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~- 1536 (1833)
..+.+++++++|+ ++.+++|+||++++||++||+|+||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 7 ~~~~~~~~~~~~~------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~ 80 (261)
T PRK14263 7 IVMDCKLDKIFYG------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGK 80 (261)
T ss_pred ceEEEEeEEEEeC------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEecccc
Confidence 5789999999995 35699999999999999999999999999999999999987 79999999998853
Q ss_pred --ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc----ccCCCCCCCChhHHHHH
Q 000224 1537 --DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK----HAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 --~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~----~~~~~~~~LSgG~kqrl 1610 (1833)
.....++.+||+||++.++ .+|+.||+.+.....+.. .+..+.+.++++.+++.+ ..++++++||||||||+
T Consensus 81 ~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 81 GVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRL 158 (261)
T ss_pred ccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHH
Confidence 2234577899999998887 599999998876554432 234456788899999853 44678899999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE--------CCEEE
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV--------GGQLR 1682 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~--------~G~i~ 1682 (1833)
+|||||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|+ +|+++
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~-~-~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~ 235 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-K-D-YTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLV 235 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEE
Confidence 99999999999999999999999999999999999984 3 4 589999999999999999999996 89999
Q ss_pred EecChhHHHh
Q 000224 1683 CIGSPQHLKT 1692 (1833)
Q Consensus 1683 ~~g~~~~l~~ 1692 (1833)
+.|+++++.+
T Consensus 236 ~~g~~~~~~~ 245 (261)
T PRK14263 236 EMGPTAQIFQ 245 (261)
T ss_pred EeCCHHHHHh
Confidence 9999988764
No 455
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=372.56 Aligned_cols=216 Identities=24% Similarity=0.376 Sum_probs=195.1
Q ss_pred ceEEEEeeEEEecCCC----------------CcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEE
Q 000224 558 RCIQIRKLHKVYATKR----------------GNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDAL 621 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~----------------~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~ 621 (1833)
..|+++||+|.|...+ +.+.+++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~ 82 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVD 82 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEE
Confidence 4588999999987531 345699999999999999999999999999999999999999999999
Q ss_pred EcCccCCccHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHH
Q 000224 622 VFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKR 701 (1833)
Q Consensus 622 i~g~~i~~~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkq 701 (1833)
++|. +++++|++.+.+.+|+.||+.+.....+.+.++..+.++++++.+++.+..++++++|||||||
T Consensus 83 ~~g~------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~q 150 (264)
T PRK13546 83 RNGE------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRA 150 (264)
T ss_pred ECCE------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHH
Confidence 9984 5678888878888999999987766666666666777888999999999899999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 702 KLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 702 rl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|++||+||+.+|++|||||||+|||+.+++.+++.|.+++ +|+|||++||+++++..+||||++|++|++++.|+++++
T Consensus 151 rv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 230 (264)
T PRK13546 151 KLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELDDV 230 (264)
T ss_pred HHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999985 589999999999999999999999999999999999888
Q ss_pred HhhhC
Q 000224 781 KHQYG 785 (1833)
Q Consensus 781 k~~~g 785 (1833)
..+++
T Consensus 231 ~~~~~ 235 (264)
T PRK13546 231 LPKYE 235 (264)
T ss_pred HHHhH
Confidence 77654
No 456
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.6e-38 Score=372.80 Aligned_cols=219 Identities=26% Similarity=0.373 Sum_probs=189.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCC--CCCCcceEEEcCccCCc-cHHHh
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGL--IPPTTGDALVFGKNITA-DMDEI 634 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl--~~p~~G~i~i~g~~i~~-~~~~~ 634 (1833)
..++++||++.|++ +.+|+|+||++++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++.. .....
T Consensus 6 ~~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T CHL00131 6 PILEIKNLHASVNE----NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEER 81 (252)
T ss_pred ceEEEEeEEEEeCC----EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhh
Confidence 46999999999953 3599999999999999999999999999999999998 68999999999998754 22222
Q ss_pred h-cceEEEccCCCCCCCCCHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHcCCC-cccccccC-CCChhHHHHHH
Q 000224 635 R-KGLGVCPQYDILFPELTVREHLEMFAVLK----GV---KEELLESVVAEMVDEVGLA-DKVNIVVR-ALSGGMKRKLS 704 (1833)
Q Consensus 635 r-~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~----~~---~~~~~~~~v~~~l~~~~L~-~~~~~~~~-~LSgGqkqrl~ 704 (1833)
+ ..+++++|++.+++.+|+.+++.+..... +. ...+..+++.++++.+|+. ...++.+. +|||||||||+
T Consensus 82 ~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~ 161 (252)
T CHL00131 82 AHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNE 161 (252)
T ss_pred heeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHH
Confidence 3 35899999999999999999998754321 11 1223456788999999997 46788887 59999999999
Q ss_pred HHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhh-cCEEEEeeCCEEEeecCHHHH
Q 000224 705 LGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEEL-GDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 705 lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l-~Dri~im~~G~l~~~G~~~~L 780 (1833)
|||||+.+|+++||||||+|||+.++++++++|++++ +|+|||++||+++++..+ |||+++|++|+++..|+++.+
T Consensus 162 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 162 ILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 9999999999999999999999999999999999986 589999999999999887 899999999999999998744
No 457
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.2e-39 Score=365.16 Aligned_cols=202 Identities=24% Similarity=0.331 Sum_probs=182.5
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++|++++|++ +.+++++||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ..++.
T Consensus 10 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~--~~~~~ 83 (214)
T PRK13543 10 PLLAAHALAFSRNE----EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG--DRSRF 83 (214)
T ss_pred ceEEEeeEEEecCC----ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch--hhhhc
Confidence 56999999999953 3599999999999999999999999999999999999999999999999987532 34567
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
+||++|++.+++.+|+.||+.+....++.. .++.+.++++.++|.+..++++.+||||||||++||||++.+|+++|
T Consensus 84 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 160 (214)
T PRK13543 84 MAYLGHLPGLKADLSTLENLHFLCGLHGRR---AKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAPLWL 160 (214)
T ss_pred eEEeecCcccccCCcHHHHHHHHHHhcCCc---HHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999998999999999998876555432 34567889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeC
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMAN 768 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~ 768 (1833)
|||||+|||+.+++.++++|++++ +|+|||++||+++++..+|||+++++.
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 161 LDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999875 589999999999999999999999864
No 458
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-39 Score=361.93 Aligned_cols=194 Identities=22% Similarity=0.318 Sum_probs=172.2
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC---CCcceEEEcCccCCccHHHhh
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP---PTTGDALVFGKNITADMDEIR 635 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~---p~~G~i~i~g~~i~~~~~~~r 635 (1833)
.+.++||+|.|+.+++++.+++|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.......+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 47899999999876566789999999999999999999999999999999999999 899999999998865434567
Q ss_pred cceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 636 KGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 636 ~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
+.+||+||++.+++.+||+||+.+..... .++++.+||||||||++|||||+.+|++
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral~~~p~l 139 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEALVSRASV 139 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHHhhCCCE
Confidence 78999999999999999999998753211 5678899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh-C-CcEEEEE-cCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK-K-GRIILLT-THSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~-~-g~tiil~-tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
+||||||+|||+.+++.++++|++++ + ++|+|++ +|+++++..+||++++|++|+++..|
T Consensus 140 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 140 LCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999985 3 5676655 56679999999999999999998654
No 459
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.9e-39 Score=368.58 Aligned_cols=211 Identities=23% Similarity=0.343 Sum_probs=183.4
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..|+++||++.|++ +.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....++
T Consensus 6 ~~i~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (225)
T PRK10247 6 PLLQLQNVGYLAGD----AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQ 81 (225)
T ss_pred ceEEEeccEEeeCC----ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHh
Confidence 46999999999953 469999999999999999999999999999999999999999999999998753 3445677
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-cccccccCCCChhHHHHHHHHHHHhCCCcE
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLA-DKVNIVVRALSGGMKRKLSLGIALIGDSKV 715 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~-~~~~~~~~~LSgGqkqrl~lA~al~~~p~v 715 (1833)
.+||+||++.+++. |++||+.+....++... .+++++++++.+|+. ...++++.+||||||||++|||||+.+|++
T Consensus 82 ~i~~~~q~~~l~~~-tv~enl~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 82 QVSYCAQTPTLFGD-TVYDNLIFPWQIRNQQP--DPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred ccEEEecccccccc-cHHHHHHhHHhhcCCCh--HHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 89999999988874 99999987655443222 245678999999996 467999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHh--CCcEEEEEcCCHHHHHhhcCEEEEee-CCEEEeecC
Q 000224 716 VILDEPTSGMDPYSMRLTWQLIKKIK--KGRIILLTTHSMDEAEELGDRIAIMA-NGSLKCCGS 776 (1833)
Q Consensus 716 liLDEPtsgLD~~~r~~l~~~l~~~~--~g~tiil~tH~~~e~~~l~Dri~im~-~G~l~~~G~ 776 (1833)
+||||||+|||+.+++.+.++|++++ .|+|||++||+++++. .|||+++|+ ++..+.+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~~~~ 221 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQEAR 221 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHhhhh
Confidence 99999999999999999999999984 3899999999999997 599999995 444444454
No 460
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=5.1e-39 Score=369.32 Aligned_cols=206 Identities=31% Similarity=0.503 Sum_probs=178.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++|++|.|+++ .+.+++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.. .....++.+
T Consensus 3 l~~~~l~~~~~~~--~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 3 IEFRNVSFSYPNQ--EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred EEEEEEEEEcCCC--CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 7899999999642 2469999999999999999999999999999999999999999999999988743 334457789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccc-----------cCCCChhHHHHHHHHH
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIV-----------VRALSGGMKRKLSLGI 707 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~-----------~~~LSgGqkqrl~lA~ 707 (1833)
||++|++.+++ .|+.||+.+.... . .++++.++++.+++.+..++. +.+||||||||++|||
T Consensus 81 ~~~~q~~~~~~-~tv~e~l~~~~~~--~----~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~ 153 (220)
T cd03245 81 GYVPQDVTLFY-GTLRDNITLGAPL--A----DDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALAR 153 (220)
T ss_pred EEeCCCCcccc-chHHHHhhcCCCC--C----CHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHH
Confidence 99999998886 6999999764211 1 134566788888887766654 4699999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeec
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCG 775 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G 775 (1833)
||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++ .+|||+++|++|+++..|
T Consensus 154 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 154 ALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999999999997668999999999988 589999999999997643
No 461
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=380.08 Aligned_cols=220 Identities=24% Similarity=0.398 Sum_probs=191.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCC-----CCcceEEEcCccCCc---
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIP-----PTTGDALVFGKNITA--- 629 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~g~~i~~--- 629 (1833)
..|+++||++.|++ +.+|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 44 ~~l~i~nl~~~~~~----~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 44 AKLSVEDLDVYYGD----DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred ceEEEEEEEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 46999999999953 469999999999999999999999999999999999986 689999999998753
Q ss_pred cHHHhhcceEEEccCCCCCCCCCHHHHHHHHHHhc------------CCC-HHHHHHHHHHHHHHcCCC----ccccccc
Q 000224 630 DMDEIRKGLGVCPQYDILFPELTVREHLEMFAVLK------------GVK-EELLESVVAEMVDEVGLA----DKVNIVV 692 (1833)
Q Consensus 630 ~~~~~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~------------~~~-~~~~~~~v~~~l~~~~L~----~~~~~~~ 692 (1833)
+....|+.+|||||++.+++. ||+||+.+..... +.. .+..++++.++++.+++. +..++++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 198 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPK-SIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNA 198 (305)
T ss_pred cHHHHhhceEEEccCCccccc-cHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcc
Confidence 234567889999999988874 9999998764332 111 123456788999999884 4568889
Q ss_pred CCCChhHHHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEE-EEeeCCEE
Q 000224 693 RALSGGMKRKLSLGIALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRI-AIMANGSL 771 (1833)
Q Consensus 693 ~~LSgGqkqrl~lA~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri-~im~~G~l 771 (1833)
.+||||||||++||+||+.+|++|||||||+|||+.+++.++++|+++++++|||++||+++++..+|||+ ++|++|++
T Consensus 199 ~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G~i 278 (305)
T PRK14264 199 LGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGGEL 278 (305)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCCEE
Confidence 99999999999999999999999999999999999999999999999977789999999999999999997 56799999
Q ss_pred EeecCHHHHHh
Q 000224 772 KCCGSSLFLKH 782 (1833)
Q Consensus 772 ~~~G~~~~Lk~ 782 (1833)
++.|++.++.+
T Consensus 279 ~~~g~~~~~~~ 289 (305)
T PRK14264 279 VEYDDTDKIFE 289 (305)
T ss_pred EEeCCHHHHHh
Confidence 99999877643
No 462
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-38 Score=360.07 Aligned_cols=192 Identities=28% Similarity=0.385 Sum_probs=157.1
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
+++-+.++++.|++ .++.++.++|.|.--..++|+||||.|||||+++|.|-+.|+.|+.+- ..|
T Consensus 585 PvLGlH~VtFgy~g-----qkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RK----------nhr 649 (807)
T KOG0066|consen 585 PVLGLHDVTFGYPG-----QKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRK----------NHR 649 (807)
T ss_pred CeeecccccccCCC-----CCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhc----------cce
Confidence 57889999999974 567899999999999999999999999999999999999999998542 235
Q ss_pred cceEEEecCC--CCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccC-CCCCCCChhHHHHHHHHHHHhcC
Q 000224 1543 RLIGYCPQFD--ALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAK-KPSFTLSGGNKRKLSVAIAMIGD 1619 (1833)
Q Consensus 1543 ~~ig~~pQ~~--~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~-~~~~~LSgG~kqrl~lA~al~~~ 1619 (1833)
-+||+.-|+. .|-...|..|.| .+...++.. .++..|-.+||..+++ -++..||||||-||++|-.-++.
T Consensus 650 L~iG~FdQh~~E~L~~Eetp~EyL---qr~FNlpyq----~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal~~ 722 (807)
T KOG0066|consen 650 LRIGWFDQHANEALNGEETPVEYL---QRKFNLPYQ----EARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELALGG 722 (807)
T ss_pred eeeechhhhhHHhhccccCHHHHH---HHhcCCChH----HHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhcCC
Confidence 5799999974 455556766655 344456543 3456789999987766 57899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEE
Q 000224 1620 PPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQL 1681 (1833)
Q Consensus 1620 p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i 1681 (1833)
|+||||||||+.||.++...+-++|.++. | .||++|||-..+..---.++|+.+..|
T Consensus 723 PDvlILDEPTNNLDIESIDALaEAIney~---G--gVi~VsHDeRLi~eT~C~LwVvE~Q~i 779 (807)
T KOG0066|consen 723 PDVLILDEPTNNLDIESIDALAEAINEYN---G--GVIMVSHDERLIVETDCNLWVVENQGI 779 (807)
T ss_pred CCEEEecCCCCCcchhhHHHHHHHHHhcc---C--cEEEEecccceeeecCceEEEEccCCh
Confidence 99999999999999999999999999872 3 599999997776554334666655444
No 463
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-39 Score=340.54 Aligned_cols=226 Identities=28% Similarity=0.411 Sum_probs=197.9
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
|+++||+.+-.+ +.+++++||++++||+.+|+||||||||||||.|+|.+.|++|++.++|.+... ...+..++-
T Consensus 2 i~a~nls~~~~G----r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~r 77 (259)
T COG4559 2 IRAENLSYSLAG----RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHR 77 (259)
T ss_pred eeeeeeEEEeec----ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHh
Confidence 788999988854 469999999999999999999999999999999999999999999999999864 445556778
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhC-----
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKG--VKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG----- 711 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~--~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~----- 711 (1833)
++.||+..+-...||+|-+.++..-.+ ....+..+.++++|...++.....+...+|||||||||.+||.|+.
T Consensus 78 aVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~~~v 157 (259)
T COG4559 78 AVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLWPPV 157 (259)
T ss_pred hhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHccCCC
Confidence 999999987445799999999865543 3333555668899999999999999999999999999999999975
Q ss_pred -CCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHH------HHhh
Q 000224 712 -DSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLF------LKHQ 783 (1833)
Q Consensus 712 -~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~------Lk~~ 783 (1833)
++++|+||||||+||......+.++.+++. +|..|+.+-||++.+..+||||++|++||++++|+|++ |.+-
T Consensus 158 ~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt~Etl~~v 237 (259)
T COG4559 158 PSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLTDETLERV 237 (259)
T ss_pred CCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcCHHHHHHH
Confidence 557999999999999999999999999995 68899999999999999999999999999999999864 5566
Q ss_pred hCCcEE
Q 000224 784 YGVGYT 789 (1833)
Q Consensus 784 ~g~gy~ 789 (1833)
||..-.
T Consensus 238 yg~~~~ 243 (259)
T COG4559 238 YGADIR 243 (259)
T ss_pred hCCcee
Confidence 765543
No 464
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-38 Score=362.35 Aligned_cols=204 Identities=25% Similarity=0.318 Sum_probs=181.9
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
+++++++|++|+|++ +.+++++||++++||++||+|+||||||||+++|+|+++|++|+|.++|+++... ..
T Consensus 9 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~--~~ 80 (214)
T PRK13543 9 PPLLAAHALAFSRNE------EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG--DR 80 (214)
T ss_pred cceEEEeeEEEecCC------ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch--hh
Confidence 357999999999953 4599999999999999999999999999999999999999999999999988642 23
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++.+||++|++.+++.+|++||+.+....++.. .++.+.++++.++|.+..++++.+||||||||++||+|++.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (214)
T PRK13543 81 SRFMAYLGHLPGLKADLSTLENLHFLCGLHGRR---AKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAP 157 (214)
T ss_pred hhceEEeecCcccccCCcHHHHHHHHHHhcCCc---HHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 457999999998888899999998876554432 34456788999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEEC
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVG 1678 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~ 1678 (1833)
+|||||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 158 LWLLDEPYANLDLEGITLVNRMISAHLR-GG-GAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999999864 44 5899999999999999999999864
No 465
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-40 Score=345.24 Aligned_cols=218 Identities=25% Similarity=0.393 Sum_probs=203.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCC-ccHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNIT-ADMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~-~~~~~~r~~i 638 (1833)
|+++||+|+|+ ++.+|+|+|++|++|.+++++||||||||||+++++.++++++|+|+++|.++. .+.+++.+.+
T Consensus 2 I~i~nv~K~y~----~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~l 77 (252)
T COG4604 2 ITIENVSKSYG----TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKL 77 (252)
T ss_pred eeehhhhHhhC----CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHH
Confidence 78999999994 567999999999999999999999999999999999999999999999999996 4667788899
Q ss_pred EEEccCCCCCCCCCHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEE
Q 000224 639 GVCPQYDILFPELTVREHLEMFA--VLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVV 716 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~--~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vl 716 (1833)
.+.-|++..-..+||+|-+.|+. .-+|....+.+..++++++.++|++..|+...+||||||||.-+|+.++.+.+.+
T Consensus 78 SILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdTdyv 157 (252)
T COG4604 78 SILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDTDYV 157 (252)
T ss_pred HHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccCcEE
Confidence 99999999999999999998853 3357667778899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHhC--CcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHH
Q 000224 717 ILDEPTSGMDPYSMRLTWQLIKKIKK--GRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLK 781 (1833)
Q Consensus 717 iLDEPtsgLD~~~r~~l~~~l~~~~~--g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk 781 (1833)
+||||.++||.....++++.|+++.+ ||||+++-||.++|..++|.|+-|++|+++..|+++++-
T Consensus 158 lLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 158 LLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred EecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhc
Confidence 99999999999999999999999853 999999999999999999999999999999999987753
No 466
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-39 Score=393.28 Aligned_cols=219 Identities=30% Similarity=0.503 Sum_probs=193.0
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.++.+||++.|+++ +++++|+||++++|+.++|+|+||||||||+++|+|+.+|++|+|.+||.+.+. +....|++
T Consensus 320 ei~~~~l~~~y~~g---~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 320 EISLENLSFRYPDG---KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred eeeecceEEecCCC---CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 35556999999753 379999999999999999999999999999999999999999999999999864 66788999
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCccc------cccc----CCCChhHHHHHHHHH
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKV------NIVV----RALSGGMKRKLSLGI 707 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~------~~~~----~~LSgGqkqrl~lA~ 707 (1833)
+++|+|+|.+|+. |++||+.++. .+..++++.++++..||.+.. |..+ ..|||||+|||++||
T Consensus 397 i~~v~Q~p~lf~g-TireNi~l~~------~~~s~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 397 ISWVSQNPYLFAG-TIRENILLAR------PDASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALAR 469 (559)
T ss_pred eeeeCCCCccccc-cHHHHhhccC------CcCCHHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHH
Confidence 9999999999987 9999999853 123356777888887776543 3333 459999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCCc
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGVG 787 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~g 787 (1833)
||+.+++++|||||||+||.++.+.+.+.|.++.+++|+|++||+++.+.. +|||++|++|+++|.|++++|..+-|..
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~-~D~I~vld~G~l~~~g~~~~L~~~~~~y 548 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAAD-ADRIVVLDNGRLVEQGTHEELSEKQGLY 548 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhc-CCEEEEecCCceeccCCHHHHhhcCcHH
Confidence 999999999999999999999999999999999999999999999999976 9999999999999999999997765543
Q ss_pred E
Q 000224 788 Y 788 (1833)
Q Consensus 788 y 788 (1833)
+
T Consensus 549 ~ 549 (559)
T COG4988 549 A 549 (559)
T ss_pred H
Confidence 3
No 467
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.9e-38 Score=364.94 Aligned_cols=202 Identities=27% Similarity=0.351 Sum_probs=176.3
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhccc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRL 1544 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~~~ 1544 (1833)
+.+++++++|+ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. .
T Consensus 23 l~~~~~~~~~~------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~----~--- 89 (224)
T cd03220 23 LGILGRKGEVG------EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL----L--- 89 (224)
T ss_pred hhhhhhhhhcC------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh----h---
Confidence 66778888885 4669999999999999999999999999999999999999999999999987531 1
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVI 1624 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vll 1624 (1833)
.+...+++.+|++||+.+....++....+.++++.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 90 ----~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lll 165 (224)
T cd03220 90 ----GLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILL 165 (224)
T ss_pred ----cccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 1123345678999999887665555544555667888999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1625 LDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1625 LDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|||||+|||+.+++.+++.|+++++ +| +|||++||+++++..+|||+++|++|++++.|
T Consensus 166 lDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 166 IDEVLAVGDAAFQEKCQRRLRELLK-QG-KTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999864 44 58999999999999999999999999998765
No 468
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-38 Score=375.50 Aligned_cols=212 Identities=25% Similarity=0.402 Sum_probs=186.9
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
|+++|++++|+++ ...+|+|+||+|++||++||+|+||||||||+++|+|+++ ++|+|+++|.++.. ....+|+
T Consensus 3 i~~~nls~~~~~~----~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~ 77 (275)
T cd03289 3 MTVKDLTAKYTEG----GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRK 77 (275)
T ss_pred EEEEEEEEEeCCC----CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhh
Confidence 7899999999632 3459999999999999999999999999999999999997 79999999999865 4556788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCC-----------CChhHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFT-----------LSGGNKRKLSV 1612 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~-----------LSgG~kqrl~l 1612 (1833)
+|+||||++.+++ .|+++|+..+.. .. .+++.++++.+||.+..++.+.. ||||||||++|
T Consensus 78 ~i~~v~q~~~lf~-~tv~~nl~~~~~---~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~L 149 (275)
T cd03289 78 AFGVIPQKVFIFS-GTFRKNLDPYGK---WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCL 149 (275)
T ss_pred hEEEECCCcccch-hhHHHHhhhccC---CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHH
Confidence 9999999999987 599999964321 12 23566778899998878887776 99999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
||||+.+|+||||||||+|||+.+++.+.+.|+++. .+ +|||++||+++++.. ||||++|++|++++.|+++++.+
T Consensus 150 aRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 150 ARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--AD-CTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred HHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--CC-CEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHHHhh
Confidence 999999999999999999999999999999999863 34 689999999999875 99999999999999999999877
Q ss_pred h
Q 000224 1693 R 1693 (1833)
Q Consensus 1693 ~ 1693 (1833)
.
T Consensus 226 ~ 226 (275)
T cd03289 226 E 226 (275)
T ss_pred C
Confidence 4
No 469
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=375.74 Aligned_cols=219 Identities=22% Similarity=0.376 Sum_probs=184.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
.+|+++|++|+|++ ++.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...+
T Consensus 5 ~~l~~~~l~~~~~~-----~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~--~~~~ 77 (272)
T PRK15056 5 AGIVVNDVTVTWRN-----GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ--ALQK 77 (272)
T ss_pred ceEEEEeEEEEecC-----CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH--hhcc
Confidence 36899999999952 2469999999999999999999999999999999999999999999999998742 1223
Q ss_pred cceEEEecCCCCC--CCCCHHHHHHHHHH----HcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1543 RLIGYCPQFDALL--EYLTVQEHLELYAR----IKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~--~~lTv~e~l~~~~~----~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
+.+||+||++.+. ...++++++.+... ..+.+....++.+.++++.++|.+..++++.+||||||||++||+||
T Consensus 78 ~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL 157 (272)
T PRK15056 78 NLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAI 157 (272)
T ss_pred ceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 4699999997652 23478888754211 11112223345677889999999888999999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+.+|++|||||||+|||+.+++.+.+.|+++++ +| +|||++||+++++..+|||++++ +|+++..|+++++.
T Consensus 158 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~g-~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 158 AQQGQVILLDEPFTGVDVKTEARIISLLRELRD-EG-KTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999863 44 58999999999999999999777 89999999988764
No 470
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.3e-38 Score=371.99 Aligned_cols=212 Identities=22% Similarity=0.313 Sum_probs=184.7
Q ss_pred EEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhccc
Q 000224 1466 YLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARRL 1544 (1833)
Q Consensus 1466 ~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~~ 1544 (1833)
+++||++. .+|+|+||++++||++||+||||||||||+++|+|+++ .+|+|.++|+++.. .....++.
T Consensus 2 ~~~~l~~~----------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~ 70 (248)
T PRK03695 2 QLNDVAVS----------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARH 70 (248)
T ss_pred cccccchh----------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhh
Confidence 46777763 17999999999999999999999999999999999985 59999999999864 34455667
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc------
Q 000224 1545 IGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG------ 1618 (1833)
Q Consensus 1545 ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~------ 1618 (1833)
+||+||++.+++.+|++||+.+.... +....+..+++.++++.+++.+..++++.+||||||||++||+||+.
T Consensus 71 i~~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 71 RAYLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred eEEecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 99999998888889999999875322 22333345677889999999888899999999999999999999997
Q ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1619 -DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1619 -~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
+|++|||||||+|||+.+++.+.++|+++++ +| +|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~-~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-QG-IAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVL 221 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 6799999999999999999999999999863 44 68999999999999999999999999999999987764
No 471
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-38 Score=368.09 Aligned_cols=218 Identities=25% Similarity=0.396 Sum_probs=181.1
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
|+++|+++.|++ .+.+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 3 l~~~~l~~~~~~-----~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (229)
T cd03254 3 IEFENVNFSYDE-----KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRS 77 (229)
T ss_pred EEEEEEEEecCC-----CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhh
Confidence 789999999963 2358999999999999999999999999999999999999999999999998754 3445677
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHH-----HHHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDD-----VVMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
.+||+||++.+++. |++||+.++.... ...+..+ ...+.++.+ ++....++++.+|||||||||+||+||
T Consensus 78 ~i~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al 154 (229)
T cd03254 78 MIGVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAM 154 (229)
T ss_pred hEEEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHH
Confidence 89999999988775 9999997653211 1111111 112233333 455556677899999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||++++++. |||+++|++|++++.|+.+++.+++
T Consensus 155 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 155 LRDPKILILDEATSNIDTETEKLIQEALEKLM-K-G-RTSIIIAHRLSTIKN-ADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEecCHHHHhh-CCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 99999999999999999999999999999984 3 4 589999999999975 9999999999999999988887654
No 472
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-39 Score=340.34 Aligned_cols=221 Identities=27% Similarity=0.388 Sum_probs=193.8
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
+|+++||+.+-. .+..++++||++++||+.||+||||||||||+|.|+|.+.|++|++.++|.++.. .+.+..
T Consensus 1 mi~a~nls~~~~------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA 74 (259)
T COG4559 1 MIRAENLSYSLA------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELA 74 (259)
T ss_pred CeeeeeeEEEee------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHH
Confidence 578999998875 3568999999999999999999999999999999999999999999999999876 456667
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh--hHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhc--
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY--RMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIG-- 1618 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~--~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~-- 1618 (1833)
++-+++||+..+-...||+|-+.+...-.+...+ +..+.+++.|.+.++...+.+...+|||||||||.+||.|+.
T Consensus 75 ~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~ 154 (259)
T COG4559 75 RHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLW 154 (259)
T ss_pred HHhhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHcc
Confidence 7789999998775567999999886544422222 445568889999999999999999999999999999999964
Q ss_pred ----CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1619 ----DPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1619 ----~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
++++|+|||||+.||+..+...+++.++++++ | ..|+.+-||++.+..+||||++|.+||+++.|+|++..+
T Consensus 155 ~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 155 PPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred CCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcC
Confidence 45699999999999999999999999999854 4 479999999999999999999999999999999987643
No 473
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.1e-38 Score=372.54 Aligned_cols=210 Identities=23% Similarity=0.385 Sum_probs=185.8
Q ss_pred EEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcceE
Q 000224 561 QIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGLG 639 (1833)
Q Consensus 561 ~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ig 639 (1833)
+++||++. .+|+|+||++++||+++|+|+||||||||+++|+|++++ +|+|.++|.++.. .....++.+|
T Consensus 2 ~~~~l~~~--------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~ 72 (248)
T PRK03695 2 QLNDVAVS--------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRA 72 (248)
T ss_pred cccccchh--------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheE
Confidence 46677763 179999999999999999999999999999999999865 9999999998853 3445567799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhC-------C
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIG-------D 712 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~-------~ 712 (1833)
|+||++.+++.+|+.||+.++... +.+.++.+++++++++.+||.+..++.+++||||||||++||+||+. +
T Consensus 73 ~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~p~ 151 (248)
T PRK03695 73 YLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDINPA 151 (248)
T ss_pred EecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccCCC
Confidence 999998888889999999876322 23344456788999999999988899999999999999999999997 7
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|++|||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 152 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 152 GQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEV 220 (248)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 79999999999999999999999999986 589999999999999999999999999999999987665
No 474
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=369.03 Aligned_cols=220 Identities=21% Similarity=0.386 Sum_probs=191.4
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCCC--
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIRS-- 1536 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~~-- 1536 (1833)
+++++|+++.|++ +.+++|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 3 ~l~~~~v~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~ 76 (250)
T PRK14266 3 RIEVENLNTYFDD------AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPA 76 (250)
T ss_pred EEEEEeEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccc
Confidence 5889999999952 459999999999999999999999999999999999864 489999999998854
Q ss_pred -ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCC-hhhHHHHHHHHHHHcCCc----cccCCCCCCCChhHHHHH
Q 000224 1537 -DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVA-EYRMDDVVMEKLVEFDLL----KHAKKPSFTLSGGNKRKL 1610 (1833)
Q Consensus 1537 -~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~-~~~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~kqrl 1610 (1833)
.....++++||+||++.+++. |+.||+.+.....+.. ....++++.++++.+++. +..++++.+||||||||+
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 77 VDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRL 155 (250)
T ss_pred ccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHH
Confidence 234567789999999988874 9999998765444332 233556778889999874 346889999999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1611 SVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1611 ~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
+|||||+.+|++|+|||||+|||+.+++.++++|++++ + + +|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~-~-~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK-E-D-YTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-C-CeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 99999999999999999999999999999999999984 3 4 5899999999999999999999999999999999887
Q ss_pred Hhh
Q 000224 1691 KTR 1693 (1833)
Q Consensus 1691 ~~~ 1693 (1833)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 543
No 475
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4.3e-38 Score=369.20 Aligned_cols=220 Identities=23% Similarity=0.319 Sum_probs=187.4
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCC--CCCCceEEEEcCeeCCCC-hH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGE--EYPTDGTAFIFGKDIRSD-PK 1539 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl--~~p~~G~i~i~G~~i~~~-~~ 1539 (1833)
++++++|+++.|++ +.+++|+||++++||++||+|+||||||||+++|+|+ ++|++|+|+++|.++... ..
T Consensus 6 ~~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~ 79 (252)
T CHL00131 6 PILEIKNLHASVNE------NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPE 79 (252)
T ss_pred ceEEEEeEEEEeCC------EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChh
Confidence 47999999999952 4599999999999999999999999999999999998 589999999999988653 22
Q ss_pred Hhcc-ceEEEecCCCCCCCCCHHHHHHHHHHHc----CCC---hhhHHHHHHHHHHHcCCc-cccCCCCC-CCChhHHHH
Q 000224 1540 AARR-LIGYCPQFDALLEYLTVQEHLELYARIK----GVA---EYRMDDVVMEKLVEFDLL-KHAKKPSF-TLSGGNKRK 1609 (1833)
Q Consensus 1540 ~~~~-~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~---~~~~~~~~~~~l~~~~L~-~~~~~~~~-~LSgG~kqr 1609 (1833)
..++ .++|++|++.+++.+|+.+++.+..... +.. ..+..+.+.++++.+++. ...++++. .||||||||
T Consensus 80 ~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qr 159 (252)
T CHL00131 80 ERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKR 159 (252)
T ss_pred hhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHH
Confidence 2222 5899999999999999999987653321 111 112345677889999997 46788887 599999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHH-cCEEEEEECCEEEEecChh
Q 000224 1610 LSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQAL-CTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1610 l~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l-~drv~im~~G~i~~~g~~~ 1688 (1833)
|+||+||+.+|++|||||||+|||+.+++.++++|++++ ++| +|||++||++++++.+ |||+++|++|+++..|+++
T Consensus 160 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 237 (252)
T CHL00131 160 NEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLM-TSE-NSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAE 237 (252)
T ss_pred HHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChh
Confidence 999999999999999999999999999999999999986 344 5899999999999987 9999999999999999987
Q ss_pred HH
Q 000224 1689 HL 1690 (1833)
Q Consensus 1689 ~l 1690 (1833)
.+
T Consensus 238 ~~ 239 (252)
T CHL00131 238 LA 239 (252)
T ss_pred hh
Confidence 43
No 476
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=367.86 Aligned_cols=220 Identities=21% Similarity=0.345 Sum_probs=193.2
Q ss_pred ceEEEEeEEEEcCCCc--------------cccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEE
Q 000224 1463 AIIYLRNLRKVYPGGK--------------RSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAF 1528 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~--------------~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~ 1528 (1833)
..|+++||+|.|...+ ....+.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~ 82 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVD 82 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEE
Confidence 3588999999986531 11345699999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHH
Q 000224 1529 IFGKDIRSDPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKR 1608 (1833)
Q Consensus 1529 i~G~~i~~~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kq 1608 (1833)
++|. +++++|...+.+.+|++||+.+.....+...++..+.+.++++.+++.+..++++.+|||||||
T Consensus 83 ~~g~------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~q 150 (264)
T PRK13546 83 RNGE------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRA 150 (264)
T ss_pred ECCE------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHH
Confidence 9884 4677888777788999999987665556655555566677888899998899999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChh
Q 000224 1609 KLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQ 1688 (1833)
Q Consensus 1609 rl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~ 1688 (1833)
|++||+||+.+|++|||||||+|||+.+++.+++.|.+++ +.| +|||++||+++++..+|||+++|++|++++.|+++
T Consensus 151 rv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~-~~g-~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 228 (264)
T PRK13546 151 KLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFK-EQN-KTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELD 228 (264)
T ss_pred HHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHH-HCC-CEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999985 344 58999999999999999999999999999999999
Q ss_pred HHHhhcCC
Q 000224 1689 HLKTRFGN 1696 (1833)
Q Consensus 1689 ~l~~~~~~ 1696 (1833)
++..++..
T Consensus 229 ~~~~~~~~ 236 (264)
T PRK13546 229 DVLPKYEA 236 (264)
T ss_pred HHHHHhHH
Confidence 98876543
No 477
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.6e-38 Score=369.48 Aligned_cols=220 Identities=22% Similarity=0.411 Sum_probs=181.6
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
++++|+++.|++. +++.+++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 1 l~i~~l~~~~~~~---~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (238)
T cd03249 1 IEFKNVSFRYPSR---PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRS 77 (238)
T ss_pred CeEEEEEEecCCC---CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHh
Confidence 4689999999642 12469999999999999999999999999999999999999999999999998754 3344567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHH-----HHHHHHHc--CCccccCCCCCCCChhHHHHHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDV-----VMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAIAM 1616 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LSgG~kqrl~lA~al 1616 (1833)
++||+||++.+++ .|++||+.+....+ ..++..+. +.++++.+ ++....++++.+|||||||||+||+||
T Consensus 78 ~i~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al 154 (238)
T cd03249 78 QIGLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARAL 154 (238)
T ss_pred hEEEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHH
Confidence 7999999988876 69999997643211 11111111 12233333 455566788999999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1617 IGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1617 ~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
+.+|++|||||||+|||+.+++.+++.|++++ +| +|||++||++++++ +|||+++|++|++++.|+.+++.+..
T Consensus 155 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g-~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 155 LRNPKILLLDEATSALDAESEKLVQEALDRAM--KG-RTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CC-CEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 99999999999999999999999999999984 34 68999999999997 79999999999999999988876543
No 478
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.8e-38 Score=409.50 Aligned_cols=223 Identities=23% Similarity=0.390 Sum_probs=194.2
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCC--CCCceEEEEc------------
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEE--YPTDGTAFIF------------ 1530 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~--~p~~G~i~i~------------ 1530 (1833)
|+++|++|+|++ +.+++|+||+|++||++||+||||||||||+|+|+|++ +|++|+|.++
T Consensus 1 l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 468999999952 46999999999999999999999999999999999997 7999999997
Q ss_pred -----------CeeCC-------C-C---hHHhccceEEEecC-CCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHH
Q 000224 1531 -----------GKDIR-------S-D---PKAARRLIGYCPQF-DALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLV 1587 (1833)
Q Consensus 1531 -----------G~~i~-------~-~---~~~~~~~ig~~pQ~-~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~ 1587 (1833)
|.++. . . ....++.+||+||+ +.+++.+|++||+.+.....+.+..+.++++.++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 33221 1 1 12346779999997 678888999999988665556655556677889999
Q ss_pred HcCCccccCCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHH
Q 000224 1588 EFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQ 1667 (1833)
Q Consensus 1588 ~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~ 1667 (1833)
.++|.+..++++++|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++.| +|||++|||++++.
T Consensus 155 ~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tviivtHd~~~~~ 233 (520)
T TIGR03269 155 MVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG-ISMVLTSHWPEVIE 233 (520)
T ss_pred HcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEeCCHHHHH
Confidence 99998888999999999999999999999999999999999999999999999999999865444 68999999999999
Q ss_pred HHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1668 ALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1668 ~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
.+||||++|++|++++.|+++++..++
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~~~ 260 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVAVF 260 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHHHH
Confidence 999999999999999999988776543
No 479
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-39 Score=418.43 Aligned_cols=224 Identities=29% Similarity=0.472 Sum_probs=201.4
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcc
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKG 637 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~ 637 (1833)
.|+++||++.||.++ ...+++|+||+|++||.+|||||+||||||.+.+|-..|.|++|.|.|||+|+++ +..++|++
T Consensus 987 ~I~~~~V~F~YPsRP-~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~ 1065 (1228)
T KOG0055|consen 987 DIEFRNVSFAYPTRP-DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQ 1065 (1228)
T ss_pred EEEEeeeEeeCCCCC-CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHh
Confidence 599999999999875 6789999999999999999999999999999999999999999999999999975 88999999
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-------CCCccccccc----CCCChhHHHHHHHH
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEV-------GLADKVNIVV----RALSGGMKRKLSLG 706 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~-------~L~~~~~~~~----~~LSgGqkqrl~lA 706 (1833)
||+|.|+|.||+. |++|||.++ ....+.+ ++.++++.. +|++..|+++ .+||||||||+|||
T Consensus 1066 i~lVsQEP~LF~~-TIrENI~YG--~~~vs~~----eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIA 1138 (1228)
T KOG0055|consen 1066 IGLVSQEPVLFNG-TIRENIAYG--SEEVSEE----EIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIA 1138 (1228)
T ss_pred cceeccCchhhcc-cHHHHHhcc--CCCCCHH----HHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHH
Confidence 9999999999976 999999987 2124443 444444443 4555566655 48999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhhCC
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQYGV 786 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~g~ 786 (1833)
||++.||+||||||.||+||.+|.+.+.+.|++.+.|||.|+++|++..+.. ||.|+|+++|++++.|++++|.++-|.
T Consensus 1139 RAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE~GtH~~L~~~~G~ 1217 (1228)
T KOG0055|consen 1139 RAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVEQGTHDELLAKRGI 1217 (1228)
T ss_pred HHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc-CCEEEEEECCEEEecccHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999975 999999999999999999999998888
Q ss_pred cEEEE
Q 000224 787 GYTLT 791 (1833)
Q Consensus 787 gy~l~ 791 (1833)
.|.|.
T Consensus 1218 Y~~Lv 1222 (1228)
T KOG0055|consen 1218 YFRLV 1222 (1228)
T ss_pred hHHHh
Confidence 77653
No 480
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.2e-38 Score=407.74 Aligned_cols=227 Identities=19% Similarity=0.338 Sum_probs=195.2
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCCC
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRSD 1537 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~~ 1537 (1833)
++++++|++++|+++. +.+.+++|+||+|++||++||+||||||||||+|+|+|+++| ++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~ 81 (529)
T PRK15134 4 PLLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHA 81 (529)
T ss_pred ceEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccC
Confidence 4799999999996311 124699999999999999999999999999999999999987 799999999998542
Q ss_pred -hH---Hhc-cceEEEecCCC--CCCCCCHHHHHHHHHHH-cCCChhhHHHHHHHHHHHcCCcc---ccCCCCCCCChhH
Q 000224 1538 -PK---AAR-RLIGYCPQFDA--LLEYLTVQEHLELYARI-KGVAEYRMDDVVMEKLVEFDLLK---HAKKPSFTLSGGN 1606 (1833)
Q Consensus 1538 -~~---~~~-~~ig~~pQ~~~--l~~~lTv~e~l~~~~~~-~g~~~~~~~~~~~~~l~~~~L~~---~~~~~~~~LSgG~ 1606 (1833)
.. ..| ++|||+||++. +++.+|++|++.+.... .+.+..+..+++.++++.++|.+ ..++++.+|||||
T Consensus 82 ~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe 161 (529)
T PRK15134 82 SEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGE 161 (529)
T ss_pred CHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHH
Confidence 21 223 57999999964 66778999998765433 35555556677889999999975 3689999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
||||+|||||+.+|++|||||||+|||+.+++.++++|++++++.| .|||++|||++++..+||||++|++|++++.|+
T Consensus 162 ~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~ 240 (529)
T PRK15134 162 RQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELN-MGLLFITHNLSIVRKLADRVAVMQNGRCVEQNR 240 (529)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcC-CeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999865434 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
++++.+
T Consensus 241 ~~~~~~ 246 (529)
T PRK15134 241 AATLFS 246 (529)
T ss_pred HHHHhh
Confidence 988753
No 481
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=370.24 Aligned_cols=221 Identities=25% Similarity=0.386 Sum_probs=190.8
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC-----CceEEEEcCeeCCC
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP-----TDGTAFIFGKDIRS 1536 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p-----~~G~i~i~G~~i~~ 1536 (1833)
...|+++|++|+|++ +.+++|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 14 ~~~l~~~~l~~~~~~------~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~ 87 (265)
T PRK14252 14 QQKSEVNKLNFYYGG------YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNI 87 (265)
T ss_pred CceEEEEEEEEEECC------eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccc
Confidence 357999999999952 4699999999999999999999999999999999999985 79999999987631
Q ss_pred -----ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChh-hHHHHHHHHHHHcCCc----cccCCCCCCCChhH
Q 000224 1537 -----DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEY-RMDDVVMEKLVEFDLL----KHAKKPSFTLSGGN 1606 (1833)
Q Consensus 1537 -----~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~-~~~~~~~~~l~~~~L~----~~~~~~~~~LSgG~ 1606 (1833)
.....++.+||+||++.+++. |++||+.+.....+.... ..++.+.++++.+++. +..++++.+|||||
T Consensus 88 ~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~ 166 (265)
T PRK14252 88 LSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQ 166 (265)
T ss_pred cccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHH
Confidence 233567789999999988875 999999876554454332 2345677788888763 45678999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1607 KRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1607 kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|||++|||||+.+|+++||||||+|||+.+++.+++.|++++ + + +|||++||+++++..+|||+++|++|++++.|+
T Consensus 167 ~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~-~-~-~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 167 QQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLK-N-K-VTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHH-h-C-CEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999985 3 3 589999999999999999999999999999999
Q ss_pred hhHHHh
Q 000224 1687 PQHLKT 1692 (1833)
Q Consensus 1687 ~~~l~~ 1692 (1833)
.+++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 988753
No 482
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.4e-38 Score=365.74 Aligned_cols=206 Identities=32% Similarity=0.511 Sum_probs=175.7
Q ss_pred EEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhcc
Q 000224 1465 IYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAARR 1543 (1833)
Q Consensus 1465 l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~~ 1543 (1833)
++++|++|.|+++ .+.+++|+||+|++||++||+||||||||||+++|+|+.+|++|+|.++|.++.. .....++
T Consensus 3 l~~~~l~~~~~~~----~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 78 (220)
T cd03245 3 IEFRNVSFSYPNQ----EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRR 78 (220)
T ss_pred EEEEEEEEEcCCC----CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHh
Confidence 7899999999631 2469999999999999999999999999999999999999999999999998754 3344567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCC-----------CCCCChhHHHHHHH
Q 000224 1544 LIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKP-----------SFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1544 ~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgG~kqrl~l 1612 (1833)
.+||+||++.+++ .|+.||+.+... .. ..+.+.++++.+++.+..++. +.+||||||||++|
T Consensus 79 ~i~~~~q~~~~~~-~tv~e~l~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~l 151 (220)
T cd03245 79 NIGYVPQDVTLFY-GTLRDNITLGAP---LA---DDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVAL 151 (220)
T ss_pred hEEEeCCCCcccc-chHHHHhhcCCC---CC---CHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHH
Confidence 8999999998876 699999876421 11 123455677888887655554 46999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEec
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIG 1685 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g 1685 (1833)
|+||+.+|++|||||||+|||+.+++.+++.|++++ + + +|||++||+++++ .+|||+++|++|++++.|
T Consensus 152 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~-~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 152 ARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLL-G-D-KTLIIITHRPSLL-DLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-C-C-CEEEEEeCCHHHH-HhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999999999999985 3 3 5899999999987 599999999999997654
No 483
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=374.83 Aligned_cols=216 Identities=21% Similarity=0.346 Sum_probs=184.9
Q ss_pred eEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcce
Q 000224 559 CIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGL 638 (1833)
Q Consensus 559 ~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~i 638 (1833)
.++++||++.|++ ++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...++.+
T Consensus 6 ~l~~~~l~~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~--~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRN---GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ--ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecC---CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH--hhccceE
Confidence 5999999999952 2469999999999999999999999999999999999999999999999988642 1123469
Q ss_pred EEEccCCCCC--CCCCHHHHHHHHHH----hcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCC
Q 000224 639 GVCPQYDILF--PELTVREHLEMFAV----LKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGD 712 (1833)
Q Consensus 639 g~~~Q~~~l~--~~lTv~e~l~~~~~----~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~ 712 (1833)
||+||++.+. ...+++|++.+... ..+......++++.++++.+||.+..++++.+||||||||++|||||+.+
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL~~~ 160 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAIAQQ 160 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999998652 23478888865311 11112233456788899999999888999999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHH
Q 000224 713 SKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL 780 (1833)
Q Consensus 713 p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~L 780 (1833)
|++|||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||++++ +|+++..|++.++
T Consensus 161 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 161 GQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 99999999999999999999999999986 5899999999999999999999777 8999999987665
No 484
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=3.7e-38 Score=363.15 Aligned_cols=211 Identities=25% Similarity=0.442 Sum_probs=178.4
Q ss_pred eEEEEeEEEEcCCCcccc-ccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEc--Ce--eCCC-C
Q 000224 1464 IIYLRNLRKVYPGGKRSD-AKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIF--GK--DIRS-D 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~-~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~--G~--~i~~-~ 1537 (1833)
+|+++|++|+|+..+..+ .+.+++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++ |. ++.. .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 478999999996321001 2469999999999999999999999999999999999999999999998 43 4432 1
Q ss_pred hH---H-hccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCcc-ccCCCCCCCChhHHHHHHH
Q 000224 1538 PK---A-ARRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLK-HAKKPSFTLSGGNKRKLSV 1612 (1833)
Q Consensus 1538 ~~---~-~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgG~kqrl~l 1612 (1833)
.. . .++++||+||++.+++.+|++||+.+.....+.......+.+.++++.+++.+ ..++++.+||||||||++|
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~l 160 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNI 160 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHH
Confidence 21 1 24579999999999999999999987555445544445567788999999976 4588999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEE
Q 000224 1613 AIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIM 1676 (1833)
Q Consensus 1613 A~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im 1676 (1833)
|+||+.+|++|||||||+|||+.+++.+.+.|++++ ++| +|||++||++++++.+|||++.+
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 161 ARGFIADYPILLLDEPTASLDAANRQVVVELIAEAK-ARG-AALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hcC-CEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999985 344 68999999999999999999876
No 485
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=3.4e-38 Score=363.38 Aligned_cols=208 Identities=24% Similarity=0.409 Sum_probs=180.5
Q ss_pred EEEEeeEEEecCCC--C-cccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcC--c--cCCc-cH
Q 000224 560 IQIRKLHKVYATKR--G-NCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFG--K--NITA-DM 631 (1833)
Q Consensus 560 i~i~~l~k~y~~~~--~-~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g--~--~i~~-~~ 631 (1833)
|+++||+|.|+..+ + ++.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| . ++.. +.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 78999999996421 1 24699999999999999999999999999999999999999999999984 3 4421 11
Q ss_pred H---H-hhcceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcc-cccccCCCChhHHHHHHHH
Q 000224 632 D---E-IRKGLGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADK-VNIVVRALSGGMKRKLSLG 706 (1833)
Q Consensus 632 ~---~-~r~~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~-~~~~~~~LSgGqkqrl~lA 706 (1833)
. + .++.+||+||++.+++.+||.|++.+.....+...+..++++.++++.+|+.+. .++++.+||||||||++||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la 161 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNIA 161 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHHH
Confidence 1 2 246799999999999999999999876555565555667788999999999864 5889999999999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEee
Q 000224 707 IALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMA 767 (1833)
Q Consensus 707 ~al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~ 767 (1833)
|||+.+|+++||||||+|||+.+++.+.++|++++ +|+|||++||+++++..+|||++.+.
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 162 RGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 99999999999999999999999999999999986 58999999999999999999998763
No 486
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=404.98 Aligned_cols=217 Identities=25% Similarity=0.402 Sum_probs=191.6
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCC--hHH
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSD--PKA 1540 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~--~~~ 1540 (1833)
++|+++|++|.|++ +.+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 3 ~~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 76 (501)
T PRK11288 3 PYLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAA 76 (501)
T ss_pred ceEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHH
Confidence 47999999999953 4599999999999999999999999999999999999999999999999998542 234
Q ss_pred hccceEEEecCCCCCCCCCHHHHHHHHHH--HcC-CChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHh
Q 000224 1541 ARRLIGYCPQFDALLEYLTVQEHLELYAR--IKG-VAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMI 1617 (1833)
Q Consensus 1541 ~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~--~~g-~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~ 1617 (1833)
.+++|||+||++.+++.+|++||+.+... ..+ .+..+.++++.++++.+++.+..++++.+|||||||||+||+||+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 77 LAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred HhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 56789999999989999999999987432 122 233445567888999999988889999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecCh
Q 000224 1618 GDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSP 1687 (1833)
Q Consensus 1618 ~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~ 1687 (1833)
.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|+++..++.
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~g-~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELR-AEG-RVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999986 344 5899999999999999999999999999877653
No 487
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.9e-38 Score=359.02 Aligned_cols=197 Identities=27% Similarity=0.360 Sum_probs=178.2
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcceE
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLG 639 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ig 639 (1833)
++++||++.|++ +.+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.......++++|
T Consensus 1 l~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (201)
T cd03231 1 LEADELTCERDG----RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLL 76 (201)
T ss_pred CEEEEEEEEeCC----ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheE
Confidence 468999999953 4699999999999999999999999999999999999999999999999987544456678899
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEEEe
Q 000224 640 VCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILD 719 (1833)
Q Consensus 640 ~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vliLD 719 (1833)
|+||++.+++.+|++||+.++... ..+++++++++.+|+.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 77 ~~~q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 150 (201)
T cd03231 77 YLGHAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWILD 150 (201)
T ss_pred EeccccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999998899999999875321 13467889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEe
Q 000224 720 EPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIM 766 (1833)
Q Consensus 720 EPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im 766 (1833)
|||+|||+.++++++++|++++ +|+|+|++||+.++....|||++.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 151 EPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999999885 5899999999999999999999876
No 488
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=4e-38 Score=367.57 Aligned_cols=204 Identities=25% Similarity=0.451 Sum_probs=178.9
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHhc
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAAR 1542 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~~ 1542 (1833)
++++++|++|.|++ +.+++++||+|++||++||+||||||||||+++|+|+++|++|+|.++| +
T Consensus 3 ~~l~~~~l~~~~~~------~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~----------~ 66 (251)
T PRK09544 3 SLVSLENVSVSFGQ------RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG----------K 66 (251)
T ss_pred cEEEEeceEEEECC------ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC----------c
Confidence 37999999999963 4599999999999999999999999999999999999999999999976 2
Q ss_pred cceEEEecCCCCCCC--CCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1543 RLIGYCPQFDALLEY--LTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~--lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
..+||+||++.+++. .|+++++.+. .+.. .+++.++++.+++.+..++++.+||||||||++||+||+.+|
T Consensus 67 ~~i~~v~q~~~~~~~l~~~~~~~~~~~---~~~~----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 67 LRIGYVPQKLYLDTTLPLTVNRFLRLR---PGTK----KEDILPALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred cCEEEeccccccccccChhHHHHHhcc---cccc----HHHHHHHHHHcCChHHHhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 369999999877765 3777776432 1221 245678899999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHH
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLK 1691 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~ 1691 (1833)
++|||||||+|||+.+++.+++.|++++++.| +|||++||+++++..+|||+++|+ |++++.|+++++.
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tiiivsH~~~~i~~~~d~i~~l~-~~i~~~g~~~~~~ 208 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELD-CAVLMVSHDLHLVMAKTDEVLCLN-HHICCSGTPEVVS 208 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEC-CceEeeCCHHHHh
Confidence 99999999999999999999999999864434 589999999999999999999996 5899999988775
No 489
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=366.71 Aligned_cols=216 Identities=23% Similarity=0.397 Sum_probs=182.7
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++|+++.|++ .+.+++|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.++.. +....++.+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i 77 (236)
T cd03253 1 IEFENVTFAYDP---GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAI 77 (236)
T ss_pred CEEEEEEEEeCC---CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 468999999953 2359999999999999999999999999999999999999999999999998753 445567789
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHHhC
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLES-----VVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIALIG 711 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~-----~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al~~ 711 (1833)
||++|++.+++ .|+.||+.++... .......+ .+.+.++.+ ++....++++.+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~-~tv~~nl~~~~~~--~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 78 GVVPQDTVLFN-DTIGYNIRYGRPD--ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred EEECCCChhhc-chHHHHHhhcCCC--CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998886 6999999875321 12222111 123344444 55556677889999999999999999999
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHh
Q 000224 712 DSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKH 782 (1833)
Q Consensus 712 ~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~ 782 (1833)
+|++|||||||+|||+.+++.++++|+++++|+|||++||+++++.. |||+++|++|+++..|+..++..
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN-ADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-CCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999999998778999999999999976 99999999999999999877765
No 490
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-38 Score=385.10 Aligned_cols=217 Identities=27% Similarity=0.384 Sum_probs=196.3
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChH-
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPK- 1539 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~- 1539 (1833)
.++++++|++|+|++ ..||++|||+|++|||+||+|.||||||||+|+|+|.++||+|+|.++|+.+.. ++.
T Consensus 6 ~~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~ 79 (500)
T COG1129 6 PPLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRD 79 (500)
T ss_pred cceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHH
Confidence 357999999999964 679999999999999999999999999999999999999999999999998863 444
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHc----CCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIK----GVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~----g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
.....|+.++|+.+|.|+|||.||+.+..... -++++...+++.++|+++++....+.++++||+||||-|.||||
T Consensus 80 A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArA 159 (500)
T COG1129 80 ALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARA 159 (500)
T ss_pred HHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHH
Confidence 44567999999999999999999997654432 25667778889999999999655999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecC
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGS 1686 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~ 1686 (1833)
|..+++||||||||+.|+....+.+.+.|++++ ++| .+||++||.|+|+.++||||.||.+|+.++.++
T Consensus 160 l~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk-~~G-v~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 160 LSFDARVLILDEPTAALTVKETERLFDLIRRLK-AQG-VAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 999999999999999999999999999999996 455 689999999999999999999999999998776
No 491
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=374.35 Aligned_cols=222 Identities=23% Similarity=0.396 Sum_probs=190.1
Q ss_pred CcceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCC-----CCceEEEEcCeeCC
Q 000224 1461 DNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEY-----PTDGTAFIFGKDIR 1535 (1833)
Q Consensus 1461 ~~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~-----p~~G~i~i~G~~i~ 1535 (1833)
.+.+|+++||++.|++ +.+|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.
T Consensus 42 ~~~~l~i~nl~~~~~~------~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~ 115 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD------DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIY 115 (305)
T ss_pred CCceEEEEEEEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 4568999999999963 469999999999999999999999999999999999986 68999999999875
Q ss_pred C---ChHHhccceEEEecCCCCCCCCCHHHHHHHHHHHc------------CCCh-hhHHHHHHHHHHHcCCc----ccc
Q 000224 1536 S---DPKAARRLIGYCPQFDALLEYLTVQEHLELYARIK------------GVAE-YRMDDVVMEKLVEFDLL----KHA 1595 (1833)
Q Consensus 1536 ~---~~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~------------g~~~-~~~~~~~~~~l~~~~L~----~~~ 1595 (1833)
. .....++++||+||++.+++ .|++||+.+..... +... ...++.+.++++.+++. +..
T Consensus 116 ~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 194 (305)
T PRK14264 116 QDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRL 194 (305)
T ss_pred cccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHh
Confidence 3 23456778999999988887 59999998754322 1111 22345677888888874 456
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEE-E
Q 000224 1596 KKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRI-G 1674 (1833)
Q Consensus 1596 ~~~~~~LSgG~kqrl~lA~al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv-~ 1674 (1833)
++++.+||||||||++||+||+.+|+||||||||+|||+.+++.++++|+++++ + .|||++||+++++..+|||+ +
T Consensus 195 ~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~i~~~~d~i~~ 271 (305)
T PRK14264 195 DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE--E-YTVVVVTHNMQQAARISDQTAV 271 (305)
T ss_pred cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEEcCHHHHHHhcCEEEE
Confidence 889999999999999999999999999999999999999999999999999853 3 58999999999999999997 4
Q ss_pred EEECCEEEEecChhHHHh
Q 000224 1675 IMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1675 im~~G~i~~~g~~~~l~~ 1692 (1833)
+|++|++++.|+++++.+
T Consensus 272 ~l~~G~i~~~g~~~~~~~ 289 (305)
T PRK14264 272 FLTGGELVEYDDTDKIFE 289 (305)
T ss_pred EecCCEEEEeCCHHHHHh
Confidence 679999999999988754
No 492
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-38 Score=364.93 Aligned_cols=206 Identities=25% Similarity=0.429 Sum_probs=178.4
Q ss_pred EEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhcce
Q 000224 560 IQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRKGL 638 (1833)
Q Consensus 560 i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~~i 638 (1833)
++++|++++|+.. .+.+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +....++.+
T Consensus 3 l~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 3 IEFKNVSLRYRPN--LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred EEEEEEEEecCCC--CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 7899999999642 2469999999999999999999999999999999999999999999999998753 445567889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcc-----------cccccCCCChhHHHHHHHHH
Q 000224 639 GVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADK-----------VNIVVRALSGGMKRKLSLGI 707 (1833)
Q Consensus 639 g~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~-----------~~~~~~~LSgGqkqrl~lA~ 707 (1833)
||+||++.+++ .|++||+.++. ... .+++.+.++.+++.+. .++.+.+||||||||++|||
T Consensus 81 ~~~~q~~~l~~-~tv~enl~~~~---~~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~lar 152 (221)
T cd03244 81 SIIPQDPVLFS-GTIRSNLDPFG---EYS----DEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLAR 152 (221)
T ss_pred EEECCCCcccc-chHHHHhCcCC---CCC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHH
Confidence 99999998876 59999997542 122 2345555666665543 35688999999999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecC
Q 000224 708 ALIGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGS 776 (1833)
Q Consensus 708 al~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~ 776 (1833)
||+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++.. |||+++|++|+++..|+
T Consensus 153 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 153 ALLRKSKILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-SDRILVLDKGRVVEFDS 220 (221)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCeEEecCC
Confidence 999999999999999999999999999999999778999999999999986 99999999999988775
No 493
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-38 Score=384.28 Aligned_cols=217 Identities=25% Similarity=0.386 Sum_probs=189.8
Q ss_pred cceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCCChHHh
Q 000224 1462 NAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAA 1541 (1833)
Q Consensus 1462 ~~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~~~~~~ 1541 (1833)
.++++++||++.|+++. .+.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 19 ~~mL~lknL~~~~~~~~---~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------- 88 (549)
T PRK13545 19 KPFDKLKDLFFRSKDGE---YHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------- 88 (549)
T ss_pred cceeEEEEEEEecCCCc---cceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee-------
Confidence 35799999999996531 24699999999999999999999999999999999999999999999999752
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCCC
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDPP 1621 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p~ 1621 (1833)
++++...+.+.+|++||+.+.....+.+..+..+.+.++++.+++.+..++++++||||||||++|||||+.+|+
T Consensus 89 -----~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~ 163 (549)
T PRK13545 89 -----LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPD 163 (549)
T ss_pred -----eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 122334566778999999886655566555556667889999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhcC
Q 000224 1622 IVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFG 1695 (1833)
Q Consensus 1622 vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~~ 1695 (1833)
+|||||||+|||+.+++.+++.|++++ ++| +|||++||++++++.+|||+++|++|++++.|+++++..++.
T Consensus 164 LLLLDEPTsgLD~~sr~~LlelL~el~-~~G-~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~ 235 (549)
T PRK13545 164 ILVIDEALSVGDQTFTKKCLDKMNEFK-EQG-KTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD 235 (549)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHH-hCC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH
Confidence 999999999999999999999999985 344 589999999999999999999999999999999998876654
No 494
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-38 Score=367.46 Aligned_cols=209 Identities=24% Similarity=0.420 Sum_probs=180.8
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCc-cHHHhhc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITA-DMDEIRK 636 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~-~~~~~r~ 636 (1833)
..++++|+++.|+++. ++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 10 ~~l~~~~l~~~~~~~~-~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 10 GIVKFQNVTFAYPTRP-DTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred ceEEEEEEEEEeCCCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5799999999996532 2469999999999999999999999999999999999999999999999988743 3345667
Q ss_pred ceEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCcccccccCCCChhHHHHHHHHHHH
Q 000224 637 GLGVCPQYDILFPELTVREHLEMFAVLKGVKEELL-----ESVVAEMVDEV--GLADKVNIVVRALSGGMKRKLSLGIAL 709 (1833)
Q Consensus 637 ~ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~-----~~~v~~~l~~~--~L~~~~~~~~~~LSgGqkqrl~lA~al 709 (1833)
.+|||||++.+++ .|++||+.+.... ....+. +..++++++.+ |+.+..++++.+|||||||||+||+||
T Consensus 89 ~i~~~~q~~~l~~-~tv~~nl~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral 165 (226)
T cd03248 89 KVSLVGQEPVLFA-RSLQDNIAYGLQS--CSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARAL 165 (226)
T ss_pred hEEEEecccHHHh-hhHHHHhccccCC--CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHH
Confidence 8999999998886 5999999864321 111111 12356788888 888888999999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHhhcCEEEEeeCCEE
Q 000224 710 IGDSKVVILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSL 771 (1833)
Q Consensus 710 ~~~p~vliLDEPtsgLD~~~r~~l~~~l~~~~~g~tiil~tH~~~e~~~l~Dri~im~~G~l 771 (1833)
+.+|+++||||||+|||+.+++.++++|+++++++|||++||+++++.. ||||++|++|++
T Consensus 166 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~i 226 (226)
T cd03248 166 IRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVER-ADQILVLDGGRI 226 (226)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHh-CCEEEEecCCcC
Confidence 9999999999999999999999999999998777999999999999975 999999999974
No 495
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-36 Score=393.05 Aligned_cols=223 Identities=24% Similarity=0.403 Sum_probs=188.5
Q ss_pred ceEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHh
Q 000224 1463 AIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAA 1541 (1833)
Q Consensus 1463 ~~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~ 1541 (1833)
..++++|++++|+.. +..+|+|+||+|++||.+||+|+||||||||+|+|+|+++|++|+|.+||.|+.. +...+
T Consensus 470 g~I~~~nvsf~y~~~----~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~l 545 (709)
T COG2274 470 GEIEFENVSFRYGPD----DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASL 545 (709)
T ss_pred ceEEEEEEEEEeCCC----CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHH
Confidence 359999999999752 3479999999999999999999999999999999999999999999999999976 77889
Q ss_pred ccceEEEecCCCCCCCCCHHHHHHHHHHHcCCChhhHHHH-----HHHHHHHc--CCccccCCCCCCCChhHHHHHHHHH
Q 000224 1542 RRLIGYCPQFDALLEYLTVQEHLELYARIKGVAEYRMDDV-----VMEKLVEF--DLLKHAKKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1542 ~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~g~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LSgG~kqrl~lA~ 1614 (1833)
|++||||||++.+|. -|++||+.+... ..+.+++.+. +.+.+..+ |...........||||||||++|||
T Consensus 546 R~~ig~V~Q~~~Lf~-gSI~eNi~l~~p--~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalAR 622 (709)
T COG2274 546 RRQVGYVLQDPFLFS-GSIRENIALGNP--EATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALAR 622 (709)
T ss_pred HhheeEEcccchhhc-CcHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHH
Confidence 999999999999886 599999987432 1222222211 12223322 3334455677889999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHhhc
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRF 1694 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~~~ 1694 (1833)
||+++|+|||||||||+||+.+.+.+.+.|.++. +| +|+|++||++..+.. ||||++|++|+++++|+.+++.++.
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~-~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~~gs~~ell~~~ 698 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QG-RTVIIIAHRLSTIRS-ADRIIVLDQGKIVEQGSHEELLAQG 698 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cC-CeEEEEEccchHhhh-ccEEEEccCCceeccCCHHHHHHhc
Confidence 9999999999999999999999999999999984 34 589999999998875 9999999999999999999999875
Q ss_pred CC
Q 000224 1695 GN 1696 (1833)
Q Consensus 1695 ~~ 1696 (1833)
|.
T Consensus 699 g~ 700 (709)
T COG2274 699 GL 700 (709)
T ss_pred Ch
Confidence 43
No 496
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-38 Score=385.06 Aligned_cols=214 Identities=21% Similarity=0.351 Sum_probs=190.6
Q ss_pred ceEEEEeeEEEecCCCCcccceeeeeEEEeCCeEEEEecCCCCChHHHHHHHcCCCCCCcceEEEcCccCCccHHHhhcc
Q 000224 558 RCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKG 637 (1833)
Q Consensus 558 ~~i~i~~l~k~y~~~~~~~~al~~vsl~i~~Gei~~llG~NGaGKSTll~~l~Gl~~p~~G~i~i~g~~i~~~~~~~r~~ 637 (1833)
..++++||++.|+++. .+.+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 20 ~mL~lknL~~~~~~~~-~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---------- 88 (549)
T PRK13545 20 PFDKLKDLFFRSKDGE-YHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---------- 88 (549)
T ss_pred ceeEEEEEEEecCCCc-cceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee----------
Confidence 4689999999996532 24699999999999999999999999999999999999999999999999641
Q ss_pred eEEEccCCCCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCcccccccCCCChhHHHHHHHHHHHhCCCcEEE
Q 000224 638 LGVCPQYDILFPELTVREHLEMFAVLKGVKEELLESVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVI 717 (1833)
Q Consensus 638 ig~~~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~v~~~l~~~~L~~~~~~~~~~LSgGqkqrl~lA~al~~~p~vli 717 (1833)
++.+.+.+.+.+|++||+.+.....+.+.++.++++.++++.++|.+..++++++||||||||++|||||+.+|++||
T Consensus 89 --~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~LLL 166 (549)
T PRK13545 89 --LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPDILV 166 (549)
T ss_pred --eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 122344567778999999887665666666677788899999999998999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHh-CCcEEEEEcCCHHHHHhhcCEEEEeeCCEEEeecCHHHHHhhh
Q 000224 718 LDEPTSGMDPYSMRLTWQLIKKIK-KGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFLKHQY 784 (1833)
Q Consensus 718 LDEPtsgLD~~~r~~l~~~l~~~~-~g~tiil~tH~~~e~~~l~Dri~im~~G~l~~~G~~~~Lk~~~ 784 (1833)
|||||+|||+.+++.+++.|++++ +|+|||++||+++++..+|||+++|++|++++.|++.++...+
T Consensus 167 LDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~ 234 (549)
T PRK13545 167 IDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHY 234 (549)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhH
Confidence 999999999999999999999985 5899999999999999999999999999999999998886654
No 497
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=321.65 Aligned_cols=219 Identities=26% Similarity=0.410 Sum_probs=200.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeC--CCC----
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDI--RSD---- 1537 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i--~~~---- 1537 (1833)
.|+++|+++.||. ..+|-|++|+.++||.+.|+||+|||||||+|.|.=+..|.+|+..|.|... +..
T Consensus 2 sirv~~in~~yg~------~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k 75 (242)
T COG4161 2 SIQLNGINCFYGA------HQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred ceEEccccccccc------chheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHH
Confidence 3789999999963 5699999999999999999999999999999999999999999999987643 322
Q ss_pred -hHHhccceEEEecCCCCCCCCCHHHHHHH-HHHHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHH
Q 000224 1538 -PKAARRLIGYCPQFDALLEYLTVQEHLEL-YARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIA 1615 (1833)
Q Consensus 1538 -~~~~~~~ig~~pQ~~~l~~~lTv~e~l~~-~~~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~a 1615 (1833)
..++|+.+|+|+|...|||.+||.|||.- ..+..|+++++.+.++.++|+++.|.+++|+.+-+|||||+|||+||||
T Consensus 76 ~i~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiara 155 (242)
T COG4161 76 AIRDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HHHHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHH
Confidence 24578999999999999999999999854 4567899999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1616 MIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1616 l~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
|+.+|++|++||||++|||+-..++.++|++++ +.| .|=+++||..+.+.+.+.||+.|.+|+|++.|+....
T Consensus 156 lmmkpqvllfdeptaaldpeitaqvv~iikel~-~tg-itqvivthev~va~k~as~vvyme~g~ive~g~a~~f 228 (242)
T COG4161 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIKELA-ETG-ITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HhcCCcEEeecCcccccCHHHHHHHHHHHHHHH-hcC-ceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhc
Confidence 999999999999999999999999999999996 444 7889999999999999999999999999999987654
No 498
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=340.44 Aligned_cols=222 Identities=24% Similarity=0.353 Sum_probs=205.1
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCCCceEEEEcCeeCCC-ChHHhc
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRS-DPKAAR 1542 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p~~G~i~i~G~~i~~-~~~~~~ 1542 (1833)
|++++|++|+|+ .+.+++++|++|++|.+.+|+||||||||||+.++++++++++|+|.++|.++.. +.+++.
T Consensus 1 MI~i~nv~K~y~------~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LA 74 (252)
T COG4604 1 MITIENVSKSYG------TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELA 74 (252)
T ss_pred CeeehhhhHhhC------CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHH
Confidence 578999999995 4779999999999999999999999999999999999999999999999999976 566778
Q ss_pred cceEEEecCCCCCCCCCHHHHHHHHH--HHcCCChhhHHHHHHHHHHHcCCccccCCCCCCCChhHHHHHHHHHHHhcCC
Q 000224 1543 RLIGYCPQFDALLEYLTVQEHLELYA--RIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP 1620 (1833)
Q Consensus 1543 ~~ig~~pQ~~~l~~~lTv~e~l~~~~--~~~g~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~kqrl~lA~al~~~p 1620 (1833)
++++.+-|+..+-..+||+|-+.|+. ..+|...++.+..++++++.++|++..++...+||||||||.-||+.++.+.
T Consensus 75 k~lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdT 154 (252)
T COG4604 75 KKLSILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDT 154 (252)
T ss_pred HHHHHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccC
Confidence 88999999998888999999887632 2347677777888999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHHHh
Q 000224 1621 PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1621 ~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l~~ 1692 (1833)
+.++||||.+.||......+++.|++++++-| +||+++-||..++..++|.|+-|++|+++..|+|+++.+
T Consensus 155 dyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~-KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 155 DYVLLDEPLNNLDMKHSVQIMKILRRLADELG-KTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred cEEEecCcccccchHHHHHHHHHHHHHHHHhC-CeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcC
Confidence 99999999999999999999999999987776 589999999999999999999999999999999998764
No 499
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.3e-38 Score=404.43 Aligned_cols=219 Identities=26% Similarity=0.424 Sum_probs=190.7
Q ss_pred eEEEEeEEEEcCCCccccccceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHhCCCCC--CceEEEEcCeeCCCC-hH-
Q 000224 1464 IIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFGFLGTNGAGKTTTLSMISGEEYP--TDGTAFIFGKDIRSD-PK- 1539 (1833)
Q Consensus 1464 ~l~v~~l~k~y~~~~~~~~~~al~~vs~~v~~Gei~gllG~NGaGKSTll~~l~Gl~~p--~~G~i~i~G~~i~~~-~~- 1539 (1833)
+|+++|++|.|++ +.+++|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|+++... ..
T Consensus 1 ~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~ 74 (500)
T TIGR02633 1 LLEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRD 74 (500)
T ss_pred CEEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4789999999952 4599999999999999999999999999999999999987 799999999998652 22
Q ss_pred HhccceEEEecCCCCCCCCCHHHHHHHHHHHc--C--CChhhHHHHHHHHHHHcCCcccc-CCCCCCCChhHHHHHHHHH
Q 000224 1540 AARRLIGYCPQFDALLEYLTVQEHLELYARIK--G--VAEYRMDDVVMEKLVEFDLLKHA-KKPSFTLSGGNKRKLSVAI 1614 (1833)
Q Consensus 1540 ~~~~~ig~~pQ~~~l~~~lTv~e~l~~~~~~~--g--~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LSgG~kqrl~lA~ 1614 (1833)
..+++|||+||++.+++.+|++||+.+..... + ...++..+++.++++.+++.+.. ++++++|||||||||+||+
T Consensus 75 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 75 TERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred HHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 24567999999998999999999998754322 1 23334456788899999997654 6789999999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEECCEEEEecChhHH
Q 000224 1615 AMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHL 1690 (1833)
Q Consensus 1615 al~~~p~vllLDEPTsgLD~~~~~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~~G~i~~~g~~~~l 1690 (1833)
||+.+|++|||||||+|||+.+++.+++.|++++ ++| +|||++|||++++..+||||++|++|+++..|+++++
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-~~g-~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLK-AHG-VACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCC-CEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999999996 444 5899999999999999999999999999999887653
No 500
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1e-36 Score=415.85 Aligned_cols=204 Identities=22% Similarity=0.305 Sum_probs=155.1
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHH---------HHhCCCCCCce----E----EEEcCeeCCCCh---------
Q 000224 1485 AVHSLTFSVQAGECFGFLGTNGAGKTTTLS---------MISGEEYPTDG----T----AFIFGKDIRSDP--------- 1538 (1833)
Q Consensus 1485 al~~vs~~v~~Gei~gllG~NGaGKSTll~---------~l~Gl~~p~~G----~----i~i~G~~i~~~~--------- 1538 (1833)
.|+++||+|++||++||.|+||||||||++ .|.|...+..+ . |.|+-..+...+
T Consensus 610 ~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g 689 (1809)
T PRK00635 610 NLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIK 689 (1809)
T ss_pred CccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehh
Confidence 699999999999999999999999999999 67776433211 1 233333221100
Q ss_pred --HHhc-------------------------------cceEE----EecC-----------------CCCCCCCCHHHHH
Q 000224 1539 --KAAR-------------------------------RLIGY----CPQF-----------------DALLEYLTVQEHL 1564 (1833)
Q Consensus 1539 --~~~~-------------------------------~~ig~----~pQ~-----------------~~l~~~lTv~e~l 1564 (1833)
+.+| +.+|+ .|.. ...+...||.|+|
T Consensus 690 ~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL 769 (1809)
T PRK00635 690 AFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADIL 769 (1809)
T ss_pred hhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHH
Confidence 0111 11221 1111 0246678999999
Q ss_pred HHHHHH---cCCChhhHHHHHHHHHHHcCCccc-cCCCCCCCChhHHHHHHHHHHHh---cCCCEEEEeCCCCCCCHHHH
Q 000224 1565 ELYARI---KGVAEYRMDDVVMEKLVEFDLLKH-AKKPSFTLSGGNKRKLSVAIAMI---GDPPIVILDEPSTGMDPIAK 1637 (1833)
Q Consensus 1565 ~~~~~~---~g~~~~~~~~~~~~~l~~~~L~~~-~~~~~~~LSgG~kqrl~lA~al~---~~p~vllLDEPTsgLD~~~~ 1637 (1833)
.+...- .+....++.+++ ++++.+||.+. .++++.+||||||||++||+||+ .+|+++||||||+|||+.++
T Consensus 770 ~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~ 848 (1809)
T PRK00635 770 EMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDI 848 (1809)
T ss_pred HcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHH
Confidence 875431 133334455566 58899999875 79999999999999999999997 69999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEecCCHHHHHHHcCEEEEEE------CCEEEEecChhHHHh
Q 000224 1638 RFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMV------GGQLRCIGSPQHLKT 1692 (1833)
Q Consensus 1638 ~~l~~~l~~l~~~~g~~tvil~sH~~~e~~~l~drv~im~------~G~i~~~g~~~~l~~ 1692 (1833)
+.++++|++++ ++| .|||++||+++++ .+|||+++|. +|++++.|+++++.+
T Consensus 849 ~~Ll~lL~~L~-~~G-~TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 849 KALIYVLQSLT-HQG-HTVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred HHHHHHHHHHH-hcC-CEEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 99999999996 445 5899999999999 7899999996 799999999988764
Done!