Query 000226
Match_columns 1832
No_of_seqs 520 out of 3579
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 17:55:35 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000226.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_4-8//hhsearch_pdb/000226hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ybx_A Phosphatidylinositol-5- 1.0 1 1 577.0 21.6 260 1524-1799 65-394 (394)
2 2gk9_A Phosphatidylinositol-4- 1.0 1 1 569.0 13.6 257 1526-1800 59-392 (392)
3 3iyg_G T-complex protein 1 sub 1.0 1 1 486.2 31.9 314 335-664 67-406 (515)
4 3aq1_B Thermosome subunit; gro 1.0 1 1 473.6 24.3 314 335-664 31-369 (500)
5 1a6d_B Thermosome (beta subuni 1.0 1 1 472.9 28.8 312 336-664 80-416 (543)
6 3iyg_A T-complex protein 1 sub 1.0 1 1 471.4 31.8 314 335-665 68-414 (529)
7 1q3q_A Thermosome alpha subuni 1.0 1 1 470.9 28.3 313 335-664 81-418 (548)
8 1a6d_A Thermosome (alpha subun 1.0 1 1 470.6 28.2 312 335-664 80-415 (545)
9 3ko1_A Chaperonin; 9-fold symm 1.0 1 1 469.9 28.6 313 335-664 88-425 (553)
10 3ruv_A Chaperonin, CPN; double 1.0 1 1 468.3 28.5 310 335-664 77-411 (543)
No 1
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=1.00 E-value=1 Score=576.95 Aligned_cols=260 Identities=27% Similarity=0.462 Sum_probs=232.8
Q ss_pred EEEECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCC-CCCCCCCCEEEEEECCCCEEEECCCHHHHH
Q ss_conf 9994489998432499999389999999988099968899963125557-668997531499741783898506999999
Q 000226 1524 RISFTDDGLLGKVKYTVTCYFAKRFDALRRMCCHSELDFIRSLSRCKKW-GAQGGKSNVFFAKTLDDRFIIKQVPKTELE 1602 (1832)
Q Consensus 1524 ~~~f~~~~~~~~~~~~~~~y~p~~F~~LR~~~~~~~~~~~~SL~~~~~~-~~~gGKSgs~F~~T~D~rfiiKti~~~E~~ 1602 (1832)
.+.|+.++.+ .+|+|++|||.+|++||++||+++.+|++||++|.+| .+++|||||+||+|.|+|||||||++.|++
T Consensus 65 ~~~f~~~~~p--~~f~~k~Y~P~~F~~LR~~~~i~~~dy~~Sl~~~~~~~~~s~GKSGs~F~~T~D~rfiIKti~~~E~~ 142 (394)
T 2ybx_A 65 NHLFNKENMP--SHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVA 142 (394)
T ss_dssp EESSSTTTSC--SEEEEEEESHHHHHHHHHHTTCCHHHHHHHHHSSCCEECC-----CCCEEECTTSSEEEEEECHHHHH
T ss_pred CCCCCCCCCC--CCEEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHH
T ss_conf 6567865688--87499997889999999982979999999854787642478998668799817972899961999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCC-CCCEEEECCCCCCCCCCCCC
Q ss_conf 99998699999997303899993014666688986422479914799976532135788-52034407897435555688
Q 000226 1603 SFIKFGPAYFKYLSESISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLFRR-NITRLYDLKGSSRSRYNADT 1681 (1832)
Q Consensus 1603 ~f~~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~g~~~~~~~iVMeNlf~~~-~i~~~yDLKGS~~~R~~~~~ 1681 (1832)
+|+++||.||+||.++ +++|||+||||+|+|++. |+ +.|||||||||+++ .|+++||||||+++|++.+.
T Consensus 143 ~l~~~lp~Y~~~~~~~---~~~TLL~k~~Gly~v~~~----~~--~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~ 213 (394)
T 2ybx_A 143 EMHNILKKYHQYIVEC---HGITLLPQFLGMYRLNVD----GV--EIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDK 213 (394)
T ss_dssp HHHHHHHHHHHHHHHT---TTCCSSCCEEEEEEEEET----TE--EEEEEEEECSSCSSSCCSEEEEECCSSSCCCCCHH
T ss_pred HHHHHHHHHHHHHHHC---CCCCCHHHHCEEEEEEEC----CE--EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 9999999999999840---898676653178999989----90--79999993677887642010020564457766753
Q ss_pred C--CCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC-------------------
Q ss_conf 8--9963113233542089997130968999999999964987720586565104754145-------------------
Q 000226 1682 S--GSNKVLLDQNLIEAMPTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSLLVGIDEE------------------- 1740 (1832)
Q Consensus 1682 ~--~~~~vl~D~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~nvmDYSLLvGv~~~------------------- 1740 (1832)
+ +...||||+||++.. .+|+|+++.|+.|.+||++||.||+++|||||||||||+..
T Consensus 214 ~~~~~~~~LkD~df~~~~--~~i~l~~~~k~~l~~qL~~D~~FL~~~~iMDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~ 291 (394)
T 2ybx_A 214 EKAKELPTLKDNDFINEG--QKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEG 291 (394)
T ss_dssp HHTSSSCEECHHHHHHTT--CCCCCCHHHHHHHHHHHHHHHHHHHHTTEESCEEEEEEEEHHHHHHHHHCC---------
T ss_pred CCCCCCCEECCCCHHHCC--CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCC
T ss_conf 445676541111367469--819978999999999999999999877876640487773155432000024455554334
Q ss_pred -----------------------------------------------CCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf -----------------------------------------------506643011566404224578776543021489
Q 000226 1741 -----------------------------------------------KHELVLGIIDFMRQYTWDKHLETWVKTSGILGG 1773 (1832)
Q Consensus 1741 -----------------------------------------------~~~l~~GIID~L~~yt~~KklE~~~K~~~~l~g 1773 (1832)
+..||+|||||||+|||+||+|||+|++ ++|
T Consensus 292 ~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~~~~iyyiGIIDiLq~Y~~~KklE~~~Ks~--~~~ 369 (394)
T 2ybx_A 292 ESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIXILTHYDAKKKAAHAAKTV--KHG 369 (394)
T ss_dssp -----------------------CCCTTCCCTTTSTTEEECCTTCSSCEEEEEEEECCCEESCC----------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH--CCC
T ss_conf 456554457875553444432222365545644432343455577774379999998631078408999999986--158
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 99999730394789999999998731
Q 000226 1774 PKNTSPTVISPQQYKKRFRKAMTTYF 1799 (1832)
Q Consensus 1774 ~~~~~~Tvv~P~~Y~~RF~~~m~~~f 1799 (1832)
. +..||+|+|++|++||++||.++|
T Consensus 370 ~-~~~iS~V~P~~Y~~RF~~fm~~if 394 (394)
T 2ybx_A 370 A-GAEISTVNPEQYSKRFLDFIGHIL 394 (394)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHC
T ss_pred C-CCCCCEECHHHHHHHHHHHHHHHC
T ss_conf 9-999856998999999999999869
No 2
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=569.00 Aligned_cols=257 Identities=28% Similarity=0.472 Sum_probs=229.5
Q ss_pred EECCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHH
Q ss_conf 94489998432499999389999999988099968899963125557668997531499741783898506999999999
Q 000226 1526 SFTDDGLLGKVKYTVTCYFAKRFDALRRMCCHSELDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVPKTELESFI 1605 (1832)
Q Consensus 1526 ~f~~~~~~~~~~~~~~~y~p~~F~~LR~~~~~~~~~~~~SL~~~~~~~~~gGKSgs~F~~T~D~rfiiKti~~~E~~~f~ 1605 (1832)
.|+.++.+ .+|+|++|||.+|++||++||+++.+|++||++|.+|. ++|||| +||+|.|+|||||||++.|+++|+
T Consensus 59 ~f~~e~~p--~~f~~k~Y~P~~F~~LR~~~~i~~~dy~~Sl~~~~~~~-s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~ 134 (392)
T 2gk9_A 59 LFHRENLP--SHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPPSE-SEGSDG-RFLISYDRTLVIKEVSSEDIADMH 134 (392)
T ss_dssp SSCCSSSC--SSBEEEEESHHHHHHHHHTTTCCHHHHHHHHHSSCCCC-CC------CCCCTTSSEEEEECCHHHHHHHH
T ss_pred CCCCCCCC--CCEEEEEECHHHHHHHHHHHCCCHHHHHHHHCCCCCCC-CCCCCC-EEEECCCCCEEEEEECHHHHHHHH
T ss_conf 57866688--86499997979999999980989899998743787455-798762-379869986899960999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCC-CCCEEEECCCCCCCCCCCCCCC-
Q ss_conf 98699999997303899993014666688986422479914799976532135788-5203440789743555568889-
Q 000226 1606 KFGPAYFKYLSESISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLFRR-NITRLYDLKGSSRSRYNADTSG- 1683 (1832)
Q Consensus 1606 ~~~p~Yf~y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~g~~~~~~~iVMeNlf~~~-~i~~~yDLKGS~~~R~~~~~~~- 1683 (1832)
++||.||+||.++ +++|||+||||+|+|++. |++ .|||||||||+++ .|+++||||||+++|++.+.+.
T Consensus 135 ~~lp~Y~~~~~~~---~~~TLL~k~~Gly~v~~~----~~~--~~~vVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~ 205 (392)
T 2gk9_A 135 SNLSNYHQYIVKC---HGNTLLPQFLGMYRVSVD----NED--SYMLVMRNMFSHRLPVHRKYDLKGSLVSREASDKEKV 205 (392)
T ss_dssp HHHHHHHHHHHHT---TSCSSSCCEEEEEECCBS----SCC--CEEEEEECSSCSSSCCSCCCEECC-------------
T ss_pred HHHHHHHHHHHHH---CCCCCHHHHCEEEEEEEC----CEE--EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCC
T ss_conf 9999999999840---798655653068999989----907--9999993677887641034450565457766752235
Q ss_pred -CCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC---------------------
Q ss_conf -9631132335420899971309689999999999649877205865651047541455---------------------
Q 000226 1684 -SNKVLLDQNLIEAMPTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSLLVGIDEEK--------------------- 1741 (1832)
Q Consensus 1684 -~~~vl~D~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~nvmDYSLLvGv~~~~--------------------- 1741 (1832)
...||||+||++.. .+|+|+++.|+.|.+||++||.||+++|||||||||||+...
T Consensus 206 ~~~~~LkD~df~~~~--~~i~l~~~~k~~l~~~l~~D~~FL~~~~iMDYSLLvGi~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (392)
T 2gk9_A 206 KELPTLRDMDFLNKN--QKVYIGEEEKKIFLEKLKRDVEFLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGD 283 (392)
T ss_dssp ----CCBTTC--CCC--CCCCC----CHHHHHHHHHHHHHHHHTTCCCCCEECCCBCC----------------------
T ss_pred CCCCEECCCCHHHCC--CEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 666611131156259--869878999999999999999999876876630587663155432112222344555545553
Q ss_pred -----------------------------------------------------CEEEEEHHHHHHCCCHHHHHHHHHHHH
Q ss_conf -----------------------------------------------------066430115664042245787765430
Q 000226 1742 -----------------------------------------------------HELVLGIIDFMRQYTWDKHLETWVKTS 1768 (1832)
Q Consensus 1742 -----------------------------------------------------~~l~~GIID~L~~yt~~KklE~~~K~~ 1768 (1832)
..||+|||||||+|||+||+|||+|++
T Consensus 284 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~~~~iyylGIIDiLq~Y~~~KklE~~~Ks~ 363 (392)
T 2gk9_A 284 CSLTGPPALVGSYGTSPEGIGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHAAKTV 363 (392)
T ss_dssp -----------------------------------------------------CBCCCEECCCC----------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHH
T ss_conf 32345643224567885453333432222366656544432343455567775279999977400087008999999986
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 21489999997303947899999999987314
Q 000226 1769 GILGGPKNTSPTVISPQQYKKRFRKAMTTYFL 1800 (1832)
Q Consensus 1769 ~~l~g~~~~~~Tvv~P~~Y~~RF~~~m~~~f~ 1800 (1832)
++|+ +..||+|+|++|++||++||.++|.
T Consensus 364 --~~~~-~~~iS~v~P~~Y~~RF~~fm~~~~~ 392 (392)
T 2gk9_A 364 --KHGA-GAEISTVHPEQYAKRFLDFITNIFA 392 (392)
T ss_dssp --------------CHHHHHHHHHHHTC----
T ss_pred --CCCC-CCCCCEECHHHHHHHHHHHHHHHHC
T ss_conf --1578-9997468989999999999999609
No 3
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=1.00 E-value=1 Score=486.25 Aligned_cols=314 Identities=23% Similarity=0.390 Sum_probs=289.9
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC------
Q ss_conf 135554-5569768863223523201389998676446510013899999999999999988186878889-90------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDEN-DR------ 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~-~~------ 406 (1832)
.+.+.. .||+++||||| |+++||++|++++++++++|+||..|++||.+|+..++..+++++++... +.
T Consensus 67 ll~e~a~~qd~e~GDGTT---tvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~v 143 (515)
T 3iyg_G 67 SMIEISRTQDEEVGDGTT---SVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNI 143 (515)
T ss_pred HHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 999999986626277722---49999999999999999879988999999999999999999985045688889999999
Q ss_pred ----------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECC
Q ss_conf ----------1159999999999997407788889999999949999923998440169981357420246888213329
Q 000226 407 ----------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476 (1832)
Q Consensus 407 ----------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~n 476 (1832)
..|.+.+++++++|+..|.++......+|+.+||+|+|++||++.||++++|++|+|++.|++|+++++|
T Consensus 144 a~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien 223 (515)
T 3iyg_G 144 INSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKN 223 (515)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEE
T ss_conf 99871487525579999999999998423356888545642305899836998010168841798278789888614441
Q ss_pred CEEEEECCCCCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
Q ss_conf 72999045223000025-------93349999999999999999998704995999906955999999998598499515
Q 000226 477 PRFLILGGALEYQRVAN-------HLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNI 549 (1832)
Q Consensus 477 PkILLl~~~Ley~k~~~-------~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~V 549 (1832)
|||||++|+|||++.+. ...++.+++++|++|++++|++|++.||+|||++++|+++|+++|.++||++++++
T Consensus 224 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~ 303 (515)
T 3iyg_G 224 PRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRV 303 (515)
T ss_pred EEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEECCC
T ss_conf 07999815554442346742896789999999999999999999999947998999788667899999987895666667
Q ss_pred CHHHHHHHHHHHCCEECCCCCCCCCCCCCE-EEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHH
Q ss_conf 958799999996997815467789999722-3499999840344666888864410899997679996049995699887
Q 000226 550 KRPLLERIARCTGAQIVPSIDHLTSQKLGY-CDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGD 628 (1832)
Q Consensus 550 k~~~LerIAr~TGA~Iissid~l~~~~LG~-C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~ 628 (1832)
++.+|+|||++|||++++++++++...||+ |+.|++.++++ ++++||+||+++.+|||+|||+|+.
T Consensus 304 ~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~-------------~~~~~i~g~~~~~~~TIllrG~t~~ 370 (515)
T 3iyg_G 304 RKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGD-------------EYFTFITECKDPKACTILLRGASKE 370 (515)
T ss_pred CHHHHHHHHHHHCCEEECCCCCCCHHHCCCCCCEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHH
T ss_conf 889999999995992642102367666287562899999878-------------1699995788887689998489889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 999999999999999999886290870797247889
Q 000226 629 NLKKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 629 ~L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
+|+|+||+++||+++++++++++++||||||+|+++
T Consensus 371 ~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~ 406 (515)
T 3iyg_G 371 ILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAV 406 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
T ss_conf 999999999999999999962896893788999999
No 4
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=1.00 E-value=1 Score=473.63 Aligned_cols=314 Identities=19% Similarity=0.300 Sum_probs=288.4
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC------
Q ss_conf 135554-5569768863223523201389998676446510013899999999999999988186878889-90------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDEN-DR------ 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~-~~------ 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++... +.
T Consensus 31 ll~e~a~~qd~e~GDGTT---tvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~v 107 (500)
T 3aq1_B 31 MIVEVSKTQDAEVGDGTT---TAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKI 107 (500)
T ss_dssp ------------CCHHHH---HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 999999963415179857---89999999999999999879998999999999999999999982688888767899999
Q ss_pred ----------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECC
Q ss_conf ----------1159999999999997407788889999999949999923998440169981357420246888213329
Q 000226 407 ----------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476 (1832)
Q Consensus 407 ----------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~n 476 (1832)
..|.+.|++|+++|+..|.++......+|+.++|+|+|++||+..||++++|++|+|++.|+.|+++++|
T Consensus 108 a~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n 187 (500)
T 3aq1_B 108 AGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVEN 187 (500)
T ss_dssp HHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEE
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCC
T ss_conf 99986231135557899999999999961334687444511227999835898001178822699405788998544359
Q ss_pred CEEEEECCCCCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
Q ss_conf 72999045223000025-------93349999999999999999998704995999906955999999998598499515
Q 000226 477 PRFLILGGALEYQRVAN-------HLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNI 549 (1832)
Q Consensus 477 PkILLl~~~Ley~k~~~-------~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~V 549 (1832)
|||||++++|+|++.+. ...+++.++++|++|++.++++|++.|+||||++++|+++|+++|.++||++++++
T Consensus 188 ~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~ 267 (500)
T 3aq1_B 188 AKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRV 267 (500)
T ss_dssp EEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCEEEEEEC
T ss_conf 87999937766665446324764899999999999999999999999974939999877767799999987898999727
Q ss_pred CHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHH
Q ss_conf 95879999999699781546778999972234999998403446668888644108999976799960499956998879
Q 000226 550 KRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDN 629 (1832)
Q Consensus 550 k~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~ 629 (1832)
++.+|+|||++|||++++++++++...||+|+.|+++++++ ++++||+||+++.+|||+|||+|+.+
T Consensus 268 ~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~ 334 (500)
T 3aq1_B 268 KKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRG-------------GKMTYVTGCQNSKAVTVLLHGGTEHV 334 (500)
T ss_dssp CHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSS-------------SEEEEEEEETTCCCEEEEEEESSHHH
T ss_pred CHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEEEEECC-------------EEEEEEECCCCCCEEEEEECCCCHHH
T ss_conf 99999999998499574560118986788760899998457-------------68999977888756999935896779
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 99999999999999999886290870797247889
Q 000226 630 LKKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 630 L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
|+|+||+++||++++++++.|+++||||||+|..+
T Consensus 335 l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~ 369 (500)
T 3aq1_B 335 VDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVEL 369 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 99999999989999999997888788872999999
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=1.00 E-value=1 Score=472.89 Aligned_cols=312 Identities=19% Similarity=0.293 Sum_probs=288.7
Q ss_pred CCCC-CCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC-------
Q ss_conf 3555-45569768863223523201389998676446510013899999999999999988186878889-90-------
Q 000226 336 LFDD-DDDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDEN-DR------- 406 (1832)
Q Consensus 336 ~~~~-~~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~-~~------- 406 (1832)
+.+. ..||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++... +.
T Consensus 80 l~e~a~~qd~e~GDGTT---tvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va 156 (543)
T 1a6d_B 80 MVEVSKTQDSFVGDGTT---TAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMA 156 (543)
T ss_dssp HHHHHTCTTCCCTTHHH---HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHH
T ss_pred HHHHHHHCCCEECCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 99999963988788845---899999999999999997799989999999999999999999826888998779999999
Q ss_pred ---------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECCC
Q ss_conf ---------11599999999999974077888899999999499999239984401699813574202468882133297
Q 000226 407 ---------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDKP 477 (1832)
Q Consensus 407 ---------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~nP 477 (1832)
..|.+.|++|+++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.|+++++||
T Consensus 157 ~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~ 235 (543)
T 1a6d_B 157 QTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDF-DNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDA 235 (543)
T ss_dssp HHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECG-GGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEE
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC-CEEEEEEECCCCCCCEEEECCEEEECCCCCCCCCCEECCC
T ss_conf 998525424454779999999999984533368744334-4489998368981222687348983177888875331387
Q ss_pred EEEEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECC
Q ss_conf 299904522300002-------5933499999999999999999987049959999069559999999985984995159
Q 000226 478 RFLILGGALEYQRVA-------NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIK 550 (1832)
Q Consensus 478 kILLl~~~Ley~k~~-------~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~Vk 550 (1832)
||||++++|+|++.+ +...+++.++++|++|++.++++|++.|++|||++++|+++|+++|.++||+++++++
T Consensus 236 kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~ 315 (543)
T 1a6d_B 236 KIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVK 315 (543)
T ss_dssp EEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCC
T ss_pred EEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCEEEECCCC
T ss_conf 69999245564434577438968899999999999999999999999729989998888688999999878966864689
Q ss_pred HHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHH
Q ss_conf 58799999996997815467789999722349999984034466688886441089999767999604999569988799
Q 000226 551 RPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDNL 630 (1832)
Q Consensus 551 ~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~L 630 (1832)
+.+|+|||++|||++++++++++...||+|+.|++++++. ++++||+||+++.+|||+|||+|+.+|
T Consensus 316 k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~t~~~l 382 (543)
T 1a6d_B 316 KSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGE-------------DYMTFVTGCKNPKAVSILVRGETEHVV 382 (543)
T ss_dssp HHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETT-------------EEEEEEEEESSSSCEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHCCCEECCCCCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHH
T ss_conf 9999999998299265551449987788763899999668-------------149999668887559999657977799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 9999999999999999886290870797247889
Q 000226 631 KKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 631 ~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
+|+||+++||++++++++.++++||||||+|..+
T Consensus 383 ~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~ 416 (543)
T 1a6d_B 383 DEMERSITDSLHVVASALEDGAYAAGGGATAAEI 416 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 9999999999999999997888167864999999
No 6
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=1.00 E-value=1 Score=471.44 Aligned_cols=314 Identities=17% Similarity=0.206 Sum_probs=285.5
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCC-CC-----
Q ss_conf 135554-556976886322352320138999867644651001389999999999999998818-6878889-90-----
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVEN-LPVGDEN-DR----- 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~-i~~~~~~-~~----- 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++ ++++... +.
T Consensus 68 ll~~~a~~qd~e~GDGTT---tvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~ 144 (529)
T 3iyg_A 68 VLCELADLQDKEVGDGTT---SVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLIN 144 (529)
T ss_pred HHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 999999976645377720---29999999999999999879999999999999999999999874260788899899999
Q ss_pred -----------HHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEE
Q ss_conf -----------115999999999999740778888-99999999499999239984401699813574202468882133
Q 000226 407 -----------ESWLEIITSLSWEAATLLKPDMSK-CGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKI 474 (1832)
Q Consensus 407 -----------~~w~~~l~~L~~eAv~~V~~d~~~-~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i 474 (1832)
..|.+.|++|+++|+..|++.... ...+|+ ++|+|++++||++.||++++|++|+|++.|+.||+.+
T Consensus 145 va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv-~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i 223 (529)
T 3iyg_A 145 AAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPV-NSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRI 223 (529)
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCC
T ss_conf 999985667553207899999999999975124478766654-4179999559885543899616874586435687516
Q ss_pred CCCEEEEECCCCCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEE
Q ss_conf 2972999045223000025-------933499999999999999999987049959999069559999999985984995
Q 000226 475 DKPRFLILGGALEYQRVAN-------HLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVL 547 (1832)
Q Consensus 475 ~nPkILLl~~~Ley~k~~~-------~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~ 547 (1832)
+||||+|++|+|+|++.+. ...+++.+.++|+++|+.++++|++.|+||||++++|+++|+++|.++||++++
T Consensus 224 en~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~ 303 (529)
T 3iyg_A 224 VNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVR 303 (529)
T ss_pred CCCEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEC
T ss_conf 88669996277654535678549968999999999999999999999999549989998788778999999986980363
Q ss_pred ECCHHHHHHHHHHHCCEECCCCCCCC------CCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEE
Q ss_conf 15958799999996997815467789------999722349999984034466688886441089999767999604999
Q 000226 548 NIKRPLLERIARCTGAQIVPSIDHLT------SQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTIL 621 (1832)
Q Consensus 548 ~Vk~~~LerIAr~TGA~Iissid~l~------~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIl 621 (1832)
++++.+|+|||++|||+++++++.+. ..+||+|+.|++++++. ++++||+||+++.+|||+
T Consensus 304 ~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~ 370 (529)
T 3iyg_A 304 RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICD-------------DELILIKNTKARTSASVI 370 (529)
T ss_pred CCCHHHHHHHHHHHCCEEECCHHCCCCHHCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEE
T ss_conf 4798889999998599566140104531005763376543899998679-------------539999757998658999
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
Q ss_conf 56998879999999999999999998862908707972478899
Q 000226 622 LKGANGDNLKKAKHVVQYGVFAAYHLALETSFLADEGASLPQLP 665 (1832)
Q Consensus 622 LRG~s~~~L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~~ 665 (1832)
|||+|+.+|+|+||+++||++++++++.++++||||||+|+++.
T Consensus 371 lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls 414 (529)
T 3iyg_A 371 LRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS 414 (529)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
T ss_conf 77862779999999999999999999638908847867999999
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=1.00 E-value=1 Score=470.90 Aligned_cols=313 Identities=24% Similarity=0.360 Sum_probs=289.0
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC------
Q ss_conf 135554-5569768863223523201389998676446510013899999999999999988186878889-90------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDEN-DR------ 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~-~~------ 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++... +.
T Consensus 81 ll~e~a~~qd~e~GDGTT---tvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~v 157 (548)
T 1q3q_A 81 MMVEVAKTQDKEAGDGTT---TAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKI 157 (548)
T ss_dssp HHHHHHHHHHHHTSSCHH---HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHH
T ss_pred HHHHHHHHCCCEECCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 999999953979878823---89999999999999999879988999999999999999999984588888778999999
Q ss_pred ----------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECC
Q ss_conf ----------1159999999999997407788889999999949999923998440169981357420246888213329
Q 000226 407 ----------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476 (1832)
Q Consensus 407 ----------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~n 476 (1832)
..|.+.|++|+++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.|+++++|
T Consensus 158 a~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien 236 (548)
T 1q3q_A 158 AATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDL-DNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEN 236 (548)
T ss_dssp HHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESS
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC-CEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEECC
T ss_conf 9987503002455579999999999984434578754557-738999944898302389710898415778998565148
Q ss_pred CEEEEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
Q ss_conf 7299904522300002-------593349999999999999999998704995999906955999999998598499515
Q 000226 477 PRFLILGGALEYQRVA-------NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNI 549 (1832)
Q Consensus 477 PkILLl~~~Ley~k~~-------~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~V 549 (1832)
|||||++++|+|++.+ +...+++.++++|++||+.++++|++.|++|||++++|+++|+++|.++||++++++
T Consensus 237 ~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~ 316 (548)
T 1q3q_A 237 AKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 (548)
T ss_dssp EEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred CEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCEEECCC
T ss_conf 87999926767543467843996889999999999999999999999985969999867858899999998795787337
Q ss_pred CHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHH
Q ss_conf 95879999999699781546778999972234999998403446668888644108999976799960499956998879
Q 000226 550 KRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDN 629 (1832)
Q Consensus 550 k~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~ 629 (1832)
++.+|+|||++|||++++++++++...||+|+.|++++++. ++++||+||+++.+|||+|||+|+.+
T Consensus 317 ~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~te~~ 383 (548)
T 1q3q_A 317 KKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAG-------------ENMIFVEGCKNPKAVTILIRGGTEHV 383 (548)
T ss_dssp CHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETT-------------EEEEEEECCSSCSSEEEEEEESSHHH
T ss_pred CHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHH
T ss_conf 99999999998599475552549987788763899999668-------------33999965899976999977897678
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 99999999999999999886290870797247889
Q 000226 630 LKKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 630 L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
|+|+||+++||++++++++.|+++||||||+|..+
T Consensus 384 l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~ 418 (548)
T 1q3q_A 384 IDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIEL 418 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 99999999979999999997788056875999999
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=1.00 E-value=1 Score=470.60 Aligned_cols=312 Identities=21% Similarity=0.321 Sum_probs=289.4
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------
Q ss_conf 135554-556976886322352320138999867644651001389999999999999998818687888990-------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDENDR------- 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~~~------- 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++ ..+.
T Consensus 80 ll~e~a~~qd~e~GDGTT---tvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va 155 (545)
T 1a6d_A 80 MIVEVSKAQDTAVGDGTT---TAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIA 155 (545)
T ss_dssp HHHGGGGCTTTCSTTHHH---HHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHH
T ss_pred HHHHHHHHCCCEECCCHH---HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHH
T ss_conf 999999965988878804---89999999999999999879988999999999999999999986278-99999999999
Q ss_pred ---------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECCC
Q ss_conf ---------11599999999999974077888899999999499999239984401699813574202468882133297
Q 000226 407 ---------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDKP 477 (1832)
Q Consensus 407 ---------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~nP 477 (1832)
..|.+.|++|+++|+..|.++......+|+ ++|+|+|++||+..||++++|++|+|++.|+.||++++||
T Consensus 156 ~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~ 234 (545)
T 1a6d_A 156 LTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDT-ANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNA 234 (545)
T ss_dssp HHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEE
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC-CEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEECCC
T ss_conf 998735403454779999999999997233678753434-3179999558972002788407982257889985640588
Q ss_pred EEEEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEECC
Q ss_conf 299904522300002-------5933499999999999999999987049959999069559999999985984995159
Q 000226 478 RFLILGGALEYQRVA-------NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIK 550 (1832)
Q Consensus 478 kILLl~~~Ley~k~~-------~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~Vk 550 (1832)
||||++++|+|++.+ +...+++.++++|++||+.++++|++.|++|||++++|+++|+++|.++||++|++++
T Consensus 235 kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~ 314 (545)
T 1a6d_A 235 KIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVK 314 (545)
T ss_dssp EEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCC
T ss_pred EEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCEEEECCCC
T ss_conf 79999167775534678439967899999999999999999999999729989998788668999999987926752489
Q ss_pred HHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHH
Q ss_conf 58799999996997815467789999722349999984034466688886441089999767999604999569988799
Q 000226 551 RPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDNL 630 (1832)
Q Consensus 551 ~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~L 630 (1832)
+.+|+|||++|||++++++++++...||+|+.|++.+++. ++++||+||+++..|||+|||+|+.+|
T Consensus 315 k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~-------------~~~~~~~g~~~~~~~TI~lrG~te~~l 381 (545)
T 1a6d_A 315 KSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGD-------------DRMTFVMGCKNPKAVSILIRGGTDHVV 381 (545)
T ss_dssp HHHHHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETT-------------EEEEEEEEESCSSCEEEEECCSSSTTH
T ss_pred HHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHHH
T ss_conf 9999999998599254660329987778862899999558-------------349999668887458999768988999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 9999999999999999886290870797247889
Q 000226 631 KKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 631 ~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
+|+||+++||++++++++.|+++||||||+|..+
T Consensus 382 ~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~ 415 (545)
T 1a6d_A 382 SEVERALNDAIRVVAITKEDGKFLWGGGAVEAEL 415 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
T ss_conf 9999999999999999986898886857999999
No 9
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=1.00 E-value=1 Score=469.86 Aligned_cols=313 Identities=22% Similarity=0.309 Sum_probs=287.8
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC------
Q ss_conf 135554-5569768863223523201389998676446510013899999999999999988186878889-90------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDEN-DR------ 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~-~~------ 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++... +.
T Consensus 88 ll~e~a~~qd~e~GDGTT---tvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~v 164 (553)
T 3ko1_A 88 LLVQIAKGQDEETADGTK---TAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKI 164 (553)
T ss_dssp HHHHHHHTCSSSSSTTHH---HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCE---EEEEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 899886077520258733---69996277887699997468996177512168999999999984688777849999999
Q ss_pred ----------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECC
Q ss_conf ----------1159999999999997407788889999999949999923998440169981357420246888213329
Q 000226 407 ----------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476 (1832)
Q Consensus 407 ----------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~n 476 (1832)
..|.+.|++|+++|+..|.++......+|+ ++|+|++++||+..||++++|++|+|++.|+.|+++++|
T Consensus 165 A~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl-~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien 243 (553)
T 3ko1_A 165 AMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDL-DNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLEN 243 (553)
T ss_dssp HHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCG-GGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC-HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 9877568765018999999999999999996287169841-267889873875111314577773000137998632002
Q ss_pred CEEEEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
Q ss_conf 7299904522300002-------593349999999999999999998704995999906955999999998598499515
Q 000226 477 PRFLILGGALEYQRVA-------NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNI 549 (1832)
Q Consensus 477 PkILLl~~~Ley~k~~-------~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~V 549 (1832)
|||||++++|+|.+.+ +...+++.++++|+++|+.++++|++.|+||||++++|++.|+++|.++||++++++
T Consensus 244 ~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v 323 (553)
T 3ko1_A 244 AKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRA 323 (553)
T ss_dssp CEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCC
T ss_pred CEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHHH
T ss_conf 45888637533467666726870898999999998999999999999862564899615748999998875441532245
Q ss_pred CHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHH
Q ss_conf 95879999999699781546778999972234999998403446668888644108999976799960499956998879
Q 000226 550 KRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDN 629 (1832)
Q Consensus 550 k~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~ 629 (1832)
++.+|+|||++|||++++++++++...||+|+.|++++++. ++++||+||+++.+|||+|||+|+.+
T Consensus 324 ~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~-------------d~~~~i~g~~~~~~~TI~lrG~te~~ 390 (553)
T 3ko1_A 324 KKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGE-------------DKMVFVEGAKNPKSISILIRGGLERL 390 (553)
T ss_dssp CHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSS-------------SCCEEEESCSSSSCEEEEECCSSTTH
T ss_pred HHHHHHHHHHHHCCEEECCCCCCCHHHCCHHHHHHHHHCCC-------------CEEEEECCCCCCCEEEEEEECCHHHH
T ss_conf 15248998775178342241008933333677777752386-------------50798606899754898550458888
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 99999999999999999886290870797247889
Q 000226 630 LKKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 630 L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
|+|+||+++|||+++++++.++++||||||+|+++
T Consensus 391 l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~ 425 (553)
T 3ko1_A 391 VDETERALRDALGTVADVIKDGRAIAGGGAVEIEI 425 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEHH
T ss_conf 88899999999998998862574401786367479
No 10
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=1.00 E-value=1 Score=468.34 Aligned_cols=310 Identities=22% Similarity=0.322 Sum_probs=287.1
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCC------
Q ss_conf 135554-556976886322352320138999867644651001389999999999999998818687888-990------
Q 000226 335 ILFDDD-DDEGGTGEWGYLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDE-NDR------ 406 (1832)
Q Consensus 335 ~~~~~~-~~ddevGDGTT~~~svvvLA~eLl~~a~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~-~~~------ 406 (1832)
.+.+.. .||+++||||| |+++||++|++++.+++++|+||..|++||.+|+..++..+++++++.. .+.
T Consensus 77 ll~e~a~~qd~e~GDGTT---tvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~v 153 (543)
T 3ruv_A 77 MLIEVAKTQEKEVGDGTT---TAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKI 153 (543)
T ss_dssp HHHHHHHHHHHHTSSCHH---HHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 999999987766488812---17999999999999998679988999999999999999999996287888887999999
Q ss_pred ----------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEECC
Q ss_conf ----------1159999999999997407788889999999949999923998440169981357420246888213329
Q 000226 407 ----------ESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476 (1832)
Q Consensus 407 ----------~~w~~~l~~L~~eAv~~V~~d~~~~~~mDi~~~VkIkki~GGs~~DS~lI~GvV~~K~~a~k~M~~~i~n 476 (1832)
..|.+.|++|+++|+..|.++ ++.+|+ ++|+|+++.||+..||++++|++|+|++.|+.|+++++|
T Consensus 154 a~tsl~sK~~~~~~~~i~~livdAv~~V~~~---~g~~dl-~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n 229 (543)
T 3ruv_A 154 AMTSITGKGAEKAKEKLAEIIVEAVSAVVDD---EGKVDK-DLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTD 229 (543)
T ss_dssp HHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT---TSCCCG-GGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEE
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC---CCCCCC-CEEEEEECCCCCCCCCEEECCEEEECCCCCCCCCCCCCC
T ss_conf 9998525554215779999999999986223---787655-438999847997001046355688326667444512057
Q ss_pred CEEEEECCCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
Q ss_conf 7299904522300002-------593349999999999999999998704995999906955999999998598499515
Q 000226 477 PRFLILGGALEYQRVA-------NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNI 549 (1832)
Q Consensus 477 PkILLl~~~Ley~k~~-------~~~~sl~~il~qE~e~L~~~V~kI~~~~pnVVlvek~Vs~~Al~~L~~~gI~vv~~V 549 (1832)
|||||++++|+|.+.+ +...++++++++|+++|+.++++|++.|+||||++++|+++|+++|.++||++++++
T Consensus 230 ~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v 309 (543)
T 3ruv_A 230 AKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRV 309 (543)
T ss_dssp EEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred CEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEEEEC
T ss_conf 47999826542233456750685789999999999999999999999970997999918864899999998696799637
Q ss_pred CHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHH
Q ss_conf 95879999999699781546778999972234999998403446668888644108999976799960499956998879
Q 000226 550 KRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDN 629 (1832)
Q Consensus 550 k~~~LerIAr~TGA~Iissid~l~~~~LG~C~~f~v~~~~~e~~~~~~~~k~~~ktli~fegc~~~~gcTIlLRG~s~~~ 629 (1832)
++.+|+|||++|||++++++++++...||+|+.|+++++++ ++++||+||+++.+|||+|||+|+.+
T Consensus 310 ~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~-------------~~~~~i~g~~~~~~~TI~lrG~te~~ 376 (543)
T 3ruv_A 310 KKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISG-------------DSMIFVEECKHPKAVTMLIRGTTEHV 376 (543)
T ss_dssp CHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETT-------------EEEEEEECCSSCSSEEEEEEESSHHH
T ss_pred CHHHHHHHHHHHCCCEECCCCCCCHHHCCCCCEEEEEEECC-------------CEEEEEECCCCCCEEEEEECCCCHHH
T ss_conf 88789999998599413441329987888561799999679-------------15999977888741689965897999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 99999999999999999886290870797247889
Q 000226 630 LKKAKHVVQYGVFAAYHLALETSFLADEGASLPQL 664 (1832)
Q Consensus 630 L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~ 664 (1832)
|+|+||+++|||+++++++.|+++||||||+|.++
T Consensus 377 l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~ 411 (543)
T 3ruv_A 377 IEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVEL 411 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHH
T ss_conf 99999999999999999986688505886999999
Done!