Your job contains 1 sequence.
>000228
MKQESQSEEMMEGKGCSSSSKKAVGFAGHTVFSWSLEDIFSQSFFKDQVEKIPESFQSVK
QYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISN
SGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKAR
NNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQ
RKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL
TLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLK
VNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNV
NQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQE
MVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSV
LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAA
QLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLL
NIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFI
YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF
TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL
ISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQGGKKEEF
EFEFVKAFRSINLIHKVLNSLGRFDELLMLENGSGNFMEAANMAVLEGDIFLATDLLQKA
WNFREASKLVLNFVFSNSLWSPGSRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAE
ANILSNDHSNLVMMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHWEDELVLNLT
TYSDDRICKSQVSIETFVYFWNCWKDKIVKIFEYLGCLRVQQDVDGYRSYEDFCLSYFSV
WKHCSNLDTTYLLLKSDAYWVRELSNMYVQKRGQLVSIDLHQLVSAAQSYWSTELLSVGI
NVLDKLEALHEQSIKNSLSVLCQSKCLSYIYDVAKFLLDSEFLYRHWDDVKTLQKFVELS
TEDFFRCIFPLDWRESLSKDMISLRQTEVCRSILEEIVSGYVTSKSKLSYGQIGRIAVMI
LGSGKLHNGLYRKVVERCVKDSPWQAFLKCLSQKMESEYLQHPSESNNERELYVIQKLHG
ALLDTYGANWRKEYDYMSPAYFLYLLERLLILISCFQGYIFTTKSSFVDWRIYQEPHTNP
TASFVTDVWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHSLVVLRLVVIIC
LLHLNFGKFGSSLRDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAFKKIGNPLV
IASLGKNCSQFLCPDAIFVNMKVMKSTDEIFGILYPKMEACQVQVGTSKDVPSKRPASLP
EDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRRSVKYQVGTSKDVPSKRPASL
PEDTDAQNKNDNTMVMNLDQLCKALEALKMLDYGNNGNHGNSVKYQVGTSKDVPSKRSAS
LPEDMDAQNMNDDTLAMDLDQLCKYVDKYSTILAARMLEESKQLYAALDGKCVIQRCMVF
VIGFHCFLLCIIFSRLKLEGLHSGI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000228
(1825 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 943 4.4e-155 3
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 1423 1.1e-148 2
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 868 2.1e-131 2
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 836 1.2e-129 2
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 861 4.6e-129 2
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 869 5.6e-128 3
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 805 2.5e-122 3
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 1135 2.8e-114 1
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 464 5.0e-45 3
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 453 2.1e-44 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 440 5.6e-44 4
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 448 4.0e-43 3
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 456 5.2e-43 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 456 2.4e-42 4
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 444 1.7e-41 3
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 410 8.6e-41 3
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 430 2.2e-40 2
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 399 3.3e-39 2
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 399 3.3e-39 2
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 410 1.3e-38 3
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 376 3.6e-38 2
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 449 4.0e-38 3
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 380 1.1e-37 3
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 383 2.3e-37 2
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 431 2.4e-37 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 389 1.3e-36 3
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 376 3.9e-36 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 423 4.6e-36 4
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 373 1.0e-35 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 373 1.0e-35 2
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 373 1.0e-35 2
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 373 1.0e-35 2
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 373 1.1e-35 2
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 424 1.1e-35 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 413 1.1e-35 3
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 389 1.3e-35 4
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 370 2.0e-35 2
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 372 4.3e-35 3
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 353 9.5e-35 2
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 358 3.1e-31 3
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 344 4.2e-31 3
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 361 1.4e-30 3
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 314 1.7e-30 2
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 335 9.2e-30 2
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 338 5.0e-29 3
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 343 1.1e-28 3
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 328 2.3e-28 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 334 6.8e-28 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 334 6.8e-28 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 337 3.0e-27 4
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 288 2.6e-26 3
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 200 6.2e-26 3
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 279 6.8e-26 2
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 279 7.2e-26 2
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 335 1.1e-25 3
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 338 1.6e-25 3
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 279 3.5e-25 2
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 342 3.8e-25 4
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 342 3.8e-25 4
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 333 5.8e-25 3
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 328 9.1e-25 3
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 280 3.9e-24 3
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 338 6.3e-24 3
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 258 7.4e-24 2
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 187 9.4e-24 3
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 261 1.5e-23 2
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 259 2.9e-23 3
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 261 3.5e-23 3
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 218 1.1e-22 3
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 185 1.5e-22 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 259 2.2e-22 4
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 259 2.2e-22 4
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 312 6.2e-22 2
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 257 6.6e-22 2
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 268 8.9e-22 2
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 262 9.0e-22 4
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 252 2.2e-21 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 252 2.2e-21 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 267 4.6e-20 2
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 250 5.2e-20 2
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 236 9.7e-20 2
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 263 3.4e-19 3
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 261 2.6e-18 3
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 250 3.7e-18 2
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 241 8.6e-18 2
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 240 9.2e-18 2
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 250 1.7e-17 2
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 253 2.4e-17 2
WB|WBGene00014208 - symbol:ZK1067.2 species:6239 "Caenorh... 238 1.2e-16 2
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 210 1.5e-16 2
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 156 1.9e-16 3
POMBASE|SPCC1739.03 - symbol:hrr1 "Helicase Required for ... 223 1.9e-16 3
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 180 3.3e-16 3
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 211 6.8e-16 2
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 151 1.6e-15 3
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 157 1.6e-15 3
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 230 1.9e-15 2
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 157 2.1e-15 3
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 187 3.2e-15 2
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 224 7.9e-15 2
WARNING: Descriptions of 71 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 943 (337.0 bits), Expect = 4.4e-155, Sum P(3) = 4.4e-155
Identities = 193/340 (56%), Positives = 245/340 (72%)
Query: 533 RRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLN 592
R +CL +L ++ S+ LP SK L+ C A L F TASSS +LH P+
Sbjct: 500 RTQDCLEMLTSISMSI---KLPDFISKFELQKLCLDNAYLLFCTASSSARLHMSS--PIQ 554
Query: 593 FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
LVIDEAAQLKE ES IPLQL G+ HA+LIGDE QLPAM++S I+ EA GRSLFERL
Sbjct: 555 LLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQLPAMIKSNIASEADLGRSLFERLVL 614
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H+K LLN+QYRMHPSIS+FPN +FY +ILD +V+ +SYEK++L +G YSFINI
Sbjct: 615 LGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINI 674
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
GRE F +S +N+VEVS V +I+ KLY + + +S+GV+SPY AQV AI+++IG
Sbjct: 675 AYGREQFGEGYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIG 734
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+Y + FTV V+S+DGFQGGEEDIIIISTVR N G+IGF+S QR NVALTRAR+CL
Sbjct: 735 EKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCL 794
Query: 832 WILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAK 871
WILG+E TL ++ S+W LV DAKAR CF NA+E+ +LA+
Sbjct: 795 WILGNEATLTNNRSVWRQLVDDAKARNCFHNAEEDESLAQ 834
Score = 588 (212.0 bits), Expect = 4.4e-155, Sum P(3) = 4.4e-155
Identities = 137/389 (35%), Positives = 214/389 (55%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP- 89
VFSWSL D+ + + ++ QV KIP +F S K+YF SFV P++EET L S + +RRA
Sbjct: 26 VFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEETHADLLSSMGTIRRAQA 85
Query: 90 --YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
+ ++ ++ KP Y + + ++ G+ + D++ + D +P ++ DL
Sbjct: 86 FKFWEIKPGKDFKPPRDLYYEVTLQMTNEYMTKGGQNLLEV--NDLIAVTDKRPIRIDDL 143
Query: 148 RRVGRTWTFVSVTTVPDDEDE------NKK---ENRYKVKARNNMQVHDKTKKSFFFIYL 198
R + V V ++ +K ++ +K + ++ SFF + L
Sbjct: 144 RFSHEPYLLALVCGVNENNPHLITILASKPIIFDDDDDIKTSSKRGKGERKSLSFFGVNL 203
Query: 199 TNILPNKRIWNSLHMC---GNWKVITQVLGTDSVVDE-RCELCSVQRKGQWDEKFGPSFS 254
N++ N RIW +LH GN K+I++VL +++ VD C C + +
Sbjct: 204 INMMTNIRIWTALHPNPEGGNLKLISRVLQSNNEVDGGSCVSCKENSESVVSDYSARMLR 263
Query: 255 S-TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
S LN SQ A+L CL C H + ++LIWGPPGTGKTKT S+LLL L+++CRTL C
Sbjct: 264 SFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCA 323
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE--EIYLN 371
PTN+A+ E+ SR++KLV ES + D LGDI+LFGNK+R+K++ + +++L
Sbjct: 324 PTNIAVLEVCSRLVKLVSESLRFDGYG------LGDIVLFGNKERMKIDDREDLFDVFLE 377
Query: 372 YRIKKLRECFAPLSGWRHCFSSMIDLLED 400
YR+ +L CF L+GWR + MI LL D
Sbjct: 378 YRVDELYRCFMALTGWRANVNRMICLLSD 406
Score = 51 (23.0 bits), Expect = 4.4e-155, Sum P(3) = 4.4e-155
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 442 FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLL 488
F +V ER L + C HLP S +S ++M +LL
Sbjct: 424 FKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEKMNQTNNLL 470
Score = 42 (19.8 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 411 KLKEREDCNVNQSEEKECRKE-TEGSKGERKPFLKYVRERFKCAVVSLRNCIFIFCT 466
KLK+ D N S ++C + T S + P ++ +F+ + L N +FCT
Sbjct: 489 KLKDTGD--ENDSRTQDCLEMLTSISMSIKLP--DFI-SKFELQKLCLDNAYLLFCT 540
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 1423 (506.0 bits), Expect = 1.1e-148, Sum P(2) = 1.1e-148
Identities = 342/864 (39%), Positives = 492/864 (56%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
V SWSL+++ + +K QVEKIP F+S YF +F+ PL+EET L S + + +AP
Sbjct: 15 VLSWSLDEVLNVDLYKGQVEKIPMEFESTGDYFKTFIPPLIEETHAALLSSMRKLWQAPV 74
Query: 91 AQVIAFEELKPYGTNQYGIEVD-YWRNTISN-SGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ + T +Y + D +++ +S S + K +P D++ L D +P V
Sbjct: 75 VEISYIMQ-----TAEYKLPNDLFYKVRLSGISNEASTKLMPRDLISLTDQRPNHVDGFN 129
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYK-VKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+ V V D + K + + + ++ K+ F I+L N+ N RI
Sbjct: 130 ISSEPYIVALVCKVDPDRPNDVTILASKPLFVEDGRRKKNEKKERLFGIHLVNLTTNIRI 189
Query: 208 WNSLHMCG---NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGA 264
WN+LH N +I++VL +S + C C ++G + P LN SQ A
Sbjct: 190 WNALHPGDEGVNLNLISRVLRRNSEDEGFCIQCL--QEGS--DGLAPRRFLKLNPSQEDA 245
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELAS 324
+L CL C H + V LIWGPPGTGKTKT S+LL TLL KCRTL C PTNV++ E+AS
Sbjct: 246 ILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTNVSVLEVAS 305
Query: 325 RVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE--EIYLNYRIKKLRECFA 382
RVLKLV S K + LGD++LFGN +R+K+ + I+++ R+ KL CF
Sbjct: 306 RVLKLVSGSLKIGNYG------LGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFM 359
Query: 383 PLSGWRHCFSSMIDLLEDCVSQYHIYVEKL------KEREDCNVNQSEEKECRKETEGSK 436
P GW+ MI LLED QY++Y+E L K ++ +V + + E +
Sbjct: 360 PFYGWKATIDGMIRLLEDPKGQYNLYLENLARANNVKRKDTGSVFKRKGNEQNENIVEQV 419
Query: 437 GERKP--FLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNL 494
+ +P F Y+ E+F L CTHLP + +S + M L+ L
Sbjct: 420 SDTRPQSFQDYLPEKFSELRKDLDLHFSSLCTHLPTALLSSQAATRMYEAIDLVRDVTIL 479
Query: 495 LFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDEL-NL 553
D V + ++ + + EG R+ Q + L +LR S+ E+ L
Sbjct: 480 AILDGVTGEGVKSVLIPN-GEGSD------RFSSQHVTVEDDYLKLLR----SIPEIFPL 528
Query: 554 PCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQL 613
P + + ++++ C A L FSTAS S +L++ P+ LVIDEAAQLKE ES+IP+QL
Sbjct: 529 PAVSDRHLIKELCLGHACLLFSTASCSARLYTGT--PIQLLVIDEAAQLKECESSIPMQL 586
Query: 614 AGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLF 673
G+ H +L+GDE QLPAMVES+I+ EAGFGRSLFERL L H K++LNIQYRMH SIS F
Sbjct: 587 PGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSF 646
Query: 674 PNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY---HSCRNIVEV 730
PN + Y +ILD V+ ++Y KQYL G +G YSFINI GRE++ S +N VEV
Sbjct: 647 PNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEV 706
Query: 731 SAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSID 788
V I+ L + +K ++++GV+SPY AQV+AI++KI G F+++++++D
Sbjct: 707 VVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVD 766
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
GFQGGEEDIII+STVR N G +GF+ +R NV LTRAR CLWILG+E TL++S+S+W
Sbjct: 767 GFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWR 826
Query: 849 ALVCDAKARQCFFNADEERNLAKA 872
L+ DAK R CF +A E+ +LA+A
Sbjct: 827 NLIQDAKERGCFHSAGEDESLAQA 850
Score = 50 (22.7 bits), Expect = 1.1e-148, Sum P(2) = 1.1e-148
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 984 SRGWPLKQFTQKEELLQKAKSLAKNDSNQFYEFVCAEANILSND-HSNLVM 1033
S+GW ++ T++E L+ ++ L ++ + + A +IL D H + V+
Sbjct: 898 SQGWLKEEETERENLVSSSQLLKQSKIDDVLRIIWA-VDILKEDFHYDQVL 947
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 868 (310.6 bits), Expect = 2.1e-131, Sum P(2) = 2.1e-131
Identities = 177/360 (49%), Positives = 244/360 (67%)
Query: 536 ECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 595
+CL LR L + +P + FC + A + TAS + +++ + LV
Sbjct: 475 DCLKALRLLPKRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLV 531
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV +++ ++A FGRSLFERL L H
Sbjct: 532 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGH 591
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG 715
+KHLL++QYRMHPSIS FPN +FY +I D NVK Y+K++L G FG++SFIN+ G
Sbjct: 592 NKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRG 651
Query: 716 REDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
+E+F HS +N+VEV+ V +I+ L+K + KVS+GVVSPY Q+ AI++KIG +Y
Sbjct: 652 KEEFGDGHSPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKY 711
Query: 775 ENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+ G F + V+S+DGFQGGEEDIIIISTVR N+ G +GF++ QR NVALTRARHCLW
Sbjct: 712 SSLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLW 771
Query: 833 ILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTS 892
++G+E TL S SIW L+ +++ R CF++A +E NL A +++ L+E + SL S S
Sbjct: 772 VIGNETTLALSGSIWATLISESRTRGCFYDATDEMNLRNA---MNEALLEDVSSSLGSLS 828
Score = 465 (168.7 bits), Expect = 2.1e-131, Sum P(2) = 2.1e-131
Identities = 141/467 (30%), Positives = 231/467 (49%)
Query: 35 SLED-IFSQSFFKDQVEK-------IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMR 86
SL D +FS S KD + K +P+ F+SV +Y+ FV LL E +L S L+++
Sbjct: 8 SLVDRVFSWSI-KDILNKDFYKQKTVPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVS 66
Query: 87 RAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSD 146
++P+ Q+ + E + ++ ++ T+ + K P D +
Sbjct: 67 KSPFVQIRSMETKTKQSSGSSSNKL-FYDITLKATESLSAKYQPK----CGDLIALTMDK 121
Query: 147 LRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKR 206
RR+ + D D K+ + + SF ++L + N R
Sbjct: 122 PRRINDLNPLLLAYVFSSDGD-------LKISVHLSRSISPLENYSFG-VFLMTLTTNTR 173
Query: 207 IWNSLHMCGNWKVITQ-VLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAM 265
IWN+LH +T+ VL ++V + + ++ G S+ LN SQ A+
Sbjct: 174 IWNALHNEAAISTLTKSVLQANTVNN----VFVLKMMGDLTLFLDIIRSTKLNSSQEDAI 229
Query: 266 LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASR 325
L CL +C H++ V+LIWGPPGTGKTKTV+ LL LL+++C+T+ C PTN AI ++ASR
Sbjct: 230 LGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQVASR 289
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE---EIYLNYRIKKLRECFA 382
+L L KE+ S S LG+I+L GN+DR+ ++ +++L+ RI KL + F+
Sbjct: 290 LLSLFKEN----STSENATYRLGNIILSGNRDRMGIHKNDHVLLDVFLDERIGKLGKLFS 345
Query: 383 PLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
P SGW S+I LE+ +Y +V +L+E V + EE+ R+E + P
Sbjct: 346 PFSGWMQRLESLIQFLENPEGKYERHVYELEE-----VERMEEEAERQEVVVNI----PT 396
Query: 443 L-KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLL 488
+ ++V++ F + CI THLPK Y+ + + M+A + L
Sbjct: 397 IGEFVKKNFNSLSEEVETCIVDLFTHLPKVYLPYDDVKIMIASRQSL 443
Score = 183 (69.5 bits), Expect = 1.3e-101, Sum P(2) = 1.3e-101
Identities = 53/185 (28%), Positives = 92/185 (49%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
VFSWS++DI ++ F+K + +P+ F+SV +Y+ FV LL E +L S L+++ ++P+
Sbjct: 13 VFSWSIKDILNKDFYKQKT--VPDKFRSVDEYYQCFVPHLLIEAHTELFSSLKSVSKSPF 70
Query: 91 AQVIAFEELKPYGTNQYGIEVDY---WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDL 147
Q+ + E + ++ Y + T S S K Y+ GD++ L KP +++DL
Sbjct: 71 VQIRSMETKTKQSSGSSSNKLFYDITLKATESLSAK--YQPKCGDLIALTMDKPRRINDL 128
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+ + F S D D K+ + + SF ++L + N RI
Sbjct: 129 NPLLLAYVFSS------DGD-------LKISVHLSRSISPLENYSFG-VFLMTLTTNTRI 174
Query: 208 WNSLH 212
WN+LH
Sbjct: 175 WNALH 179
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 836 (299.3 bits), Expect = 1.2e-129, Sum P(2) = 1.2e-129
Identities = 174/355 (49%), Positives = 236/355 (66%)
Query: 537 CLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVI 596
CL +LR L + ++ + FC + A + F TAS + ++ + ++ LV+
Sbjct: 334 CLQILRLLPERFEVSDMLENNDT---KTFCLQNADIIFCTASGAADMNPIRTGSVDLLVV 390
Query: 597 DEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHS 656
DEAAQLKE ES LQL+G+ HAVLIGDE QLPAMV + EA FGRSLFERL L H+
Sbjct: 391 DEAAQLKECESVAALQLSGLRHAVLIGDELQLPAMVHN----EAKFGRSLFERLVLLGHN 446
Query: 657 KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
KHLLN+QYRMHPSIS FPN +FY +I D ANV+ Y+K++L G FG++SFIN+ G
Sbjct: 447 KHLLNVQYRMHPSISRFPNKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGE 506
Query: 717 EDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE 775
E+F HS +N+VEV+ + +I+ L+K + K+S+GVVSPY QV AI+++ +Y
Sbjct: 507 EEFGDGHSPKNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYS 566
Query: 776 NKDG-FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWIL 834
+ G FT+ V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW++
Sbjct: 567 SLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVI 626
Query: 835 GSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT 889
G+E TL S S W L+ +++ CF++A +E+NL A E E V SL+
Sbjct: 627 GNETTLALSGSSWAKLISESRTLGCFYDAADEKNLRDAMNEALLEDVSTSFGSLS 681
Score = 481 (174.4 bits), Expect = 1.2e-129, Sum P(2) = 1.2e-129
Identities = 127/357 (35%), Positives = 188/357 (52%)
Query: 194 FFIYLTNILPNKRIWNSLHM-CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPS 252
F ++L N+ N RIWN+LH N +I VL +++ E+C +C G D
Sbjct: 12 FGVFLMNLTTNTRIWNALHNEAANSTLIKSVLQENTLTTEQC-VCESGAHGS-DRVTNII 69
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
S+ LN SQ A+L+CL+ +C H+ V+LIWGPPGTGKTKTV+ LL LL++ C+T+ C
Sbjct: 70 RSAKLNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVATLLFCLLKLSCKTVVC 129
Query: 313 TPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRL--KVNPGFEEIYL 370
PTN AI E+ SR+L L K S S LG+I+L GN+ R+ K N +++L
Sbjct: 130 APTNTAIVEVTSRLLSLFKTSSSEHSTYG-----LGNIVLSGNQARMGIKENDVLLDVFL 184
Query: 371 NYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRK 430
+ RI L F+P SGW+ S+ID LE+ ++Y YV LKE E SEE E +K
Sbjct: 185 DERIGILTSLFSPTSGWKQRLESLIDFLENTEAKYEHYVHLLKEVE----RMSEEAEKKK 240
Query: 431 ETEGSKGERKPFL---KYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSL 487
+ K + L ++V++ F L + THLPKS+I+ + + MV +
Sbjct: 241 KGADKKPKAIKILTFGEFVKKTFDGFSEELEKGMVDLWTHLPKSFITSENVKSMVTARKA 300
Query: 488 LDSFGNLLFQDNVVSKELEK-LFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRN 543
L L ++N + +K G+S A+ + +L+L R E +L N
Sbjct: 301 LQRVRYFL-KENFSRDDFKKGSLKFDCFNGVS-AYCLQ--ILRLLPERFEVSDMLEN 353
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 861 (308.1 bits), Expect = 4.6e-129, Sum P(2) = 4.6e-129
Identities = 177/360 (49%), Positives = 242/360 (67%)
Query: 536 ECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLV 595
+CL LR L + +P + FC + A + TAS + +++ + LV
Sbjct: 312 DCLKALRLLPKRFE---IPDMLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLV 368
Query: 596 IDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNH 655
+DEAAQLKE ES LQL G+ HA+LIGDE QLPAMV +++ ++A FGRSLFERL L H
Sbjct: 369 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGH 428
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG 715
+KHLL++QYRMHPSIS FPN +FY +I D NVK Y+K++L G F ++SFIN+ G
Sbjct: 429 NKHLLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRG 488
Query: 716 REDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEY 774
+E+F HS +N+VEV+ + +I+ LYK + KVS+GVVSPY Q+ AI++KIG +Y
Sbjct: 489 KEEFGDGHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKY 548
Query: 775 ENKDG--FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLW 832
+ G FT+ V+S+DGFQGGEEDIIIISTVR N G +GF++ QR NVALTRARHCLW
Sbjct: 549 SSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLW 608
Query: 833 ILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLTSTS 892
++G+E TL S SIW L+ +++ R CF +A +E NL A +++ L+E + SL S S
Sbjct: 609 VIGNETTLALSGSIWATLISESRTRGCFHDATDEMNLRDA---MNEALLEDVSSSLGSLS 665
Score = 450 (163.5 bits), Expect = 4.6e-129, Sum P(2) = 4.6e-129
Identities = 106/289 (36%), Positives = 164/289 (56%)
Query: 204 NKRIWNSLHMCGNWKVITQ-VLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQV 262
N RIWN+LH + +T+ VL ++ E+C CS + G+ D S+ LN SQ
Sbjct: 6 NTRIWNALHNEADISTLTKSVLQANTEGTEQC-FCS-ENDGRSDLVLDIIRSTKLNSSQE 63
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L CL +C H++ V+LIWGPP TGKTKTV+ LL LL+++C+T+ C PTN AI ++
Sbjct: 64 DAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKLRCKTVVCAPTNTAIVQV 123
Query: 323 ASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFE---EIYLNYRIKKLRE 379
SR+L L KE+ S + LG+I+L GN+DR+ +N +++L+ RI KL +
Sbjct: 124 TSRLLSLFKEN----STAENATYRLGNIILSGNRDRMGINKNDHVLLDVFLDERIGKLGK 179
Query: 380 CFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGER 439
F+P SGW S+I LE+ +Y +V +L+E E +N+ +E+E + GE
Sbjct: 180 LFSPFSGWMQRLESLIQFLENPEGKYERHVYELEEVE--RMNEEDEREEVVVNIPTFGE- 236
Query: 440 KPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLL 488
+V++ F ++ CI THLPK Y+ ++M+A + L
Sbjct: 237 -----FVQKNFNSLSEEVKTCIVDLYTHLPKVYLPYEDVKKMIASRQTL 280
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 869 (311.0 bits), Expect = 5.6e-128, Sum P(3) = 5.6e-128
Identities = 173/335 (51%), Positives = 235/335 (70%)
Query: 562 LEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
+ FC + A + F TASS ++ I ++ LV+DE AQLKE ES LQL G+ HA+L
Sbjct: 531 IRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHALL 590
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRN 681
IGDE QLPAMV ++ D+A FGRSLFERL + HSKHLLN+QYRMHPSIS FPN +FY
Sbjct: 591 IGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGG 650
Query: 682 QILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKL 740
+I D ANV+ YEK++L G FGT+SFIN+ G+E+F HS +N+VEV+ + KI+ L
Sbjct: 651 RITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFGDGHSPKNMVEVAVISKIISNL 710
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG---FTVKVKSIDGFQGGEEDI 797
+K KQK+S+GV+SPY QV AI++++G +Y + FT+ V+S+DGFQGGE D+
Sbjct: 711 FKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDV 770
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
IIISTVRCN G++GF+S QR NVALTRARHCLW++G+ TL S SIW L+ +++ R
Sbjct: 771 IIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTR 830
Query: 858 QCFFNADEERNLAKARLEVSKELVEIGAESLTSTS 892
CF++A +++NL A +S L++ + S S S
Sbjct: 831 GCFYDAVDDKNLRDA---MSDALLDDVSSSFGSLS 862
Score = 403 (146.9 bits), Expect = 5.6e-128, Sum P(3) = 5.6e-128
Identities = 105/311 (33%), Positives = 165/311 (53%)
Query: 33 SWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQ 92
SWSL+DI ++ K+++ IP+ F SV +Y FV LLEETR +L S ++ ++P ++
Sbjct: 24 SWSLKDILNEDLSKEKIMTIPDRFSSVDEYSQCFVPHLLEETRTELFSSFRSLSKSPVSR 83
Query: 93 VIAFE-ELKPY-GTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADF-----KPEKVS 145
+++ E ++ Y G + D ++ E Y+ GDI+ L+ +P ++
Sbjct: 84 ILSVETKVIEYSGRSSIKWFHDIKLMDYADDKNEIYEPKCGDIIALSPLSLTEERP-RID 142
Query: 146 DLRRVGRTWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFF-IYLTNILPN 204
DL + + F +V D K+ + + K +F ++L NI N
Sbjct: 143 DLDPLLLGYVF----SVYGDS---------KISVHFSRSISQSEKHTFCTGVFLINITTN 189
Query: 205 KRIWNSLHM-CGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSF-SSTLNESQV 262
RIWN+LH + +I VL D+ E+C C G ++ S+ LN SQ
Sbjct: 190 TRIWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNSSQE 249
Query: 263 GAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITEL 322
A+L L+ +C H+ V+LIWGPPGTGKTKTV+ LL TL+++KC+T+ C PTN I +
Sbjct: 250 AAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQLKCKTVVCAPTNTTIVAV 309
Query: 323 ASRVLKLVKES 333
ASR+L L KE+
Sbjct: 310 ASRLLSLSKET 320
Score = 161 (61.7 bits), Expect = 1.6e-102, Sum P(3) = 1.6e-102
Identities = 51/186 (27%), Positives = 86/186 (46%)
Query: 249 FGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR 308
+GP T V +L+ L +L C ++ P T T+ + LL +
Sbjct: 271 WGPP--GTGKTKTVATLLSTLMQLKCK-----TVVCAPTNT----TIVAVASRLLSLSKE 319
Query: 309 TLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV--NPGFE 366
T+ C PTN AI E+ SR + Y T +G+I+L GN++R+ + N
Sbjct: 320 TIVCAPTNSAIAEVVSR-FEFSTLFYGTSILERTTY-GMGNIVLSGNRERMGITSNKVLL 377
Query: 367 EIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEK 426
++ N R+ KL F GW+ S+ID LE+ ++Y +V +L E E ++ +++
Sbjct: 378 NVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQHVNEL-ELERMTEDEKKKE 436
Query: 427 ECRKET 432
E + T
Sbjct: 437 EVEERT 442
Score = 55 (24.4 bits), Expect = 5.6e-128, Sum P(3) = 5.6e-128
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 466 THLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEK 507
THLPKS+IS + ++A L L Q+N + +K
Sbjct: 453 THLPKSFISSKDVKNLIAACQALHRVRYFL-QENSSRDDFKK 493
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 805 (288.4 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 167/317 (52%), Positives = 218/317 (68%)
Query: 568 KRASLFFSTASSSYKLHSV-------EIKPLNF--LVIDEAAQLKESESTIPLQLAGINH 618
K LF ST L S+ E K N LV+DEAAQLKE ES LQL G+ H
Sbjct: 316 KLRKLFLSTCGWKQSLESIIDLLENTETKTGNIEVLVVDEAAQLKECESVAALQLPGLRH 375
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
A+LIGDE QLPAMV + ++A FGRSLFERL L H KHLL++QYRMHPSIS FP +F
Sbjct: 376 AILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGHKKHLLDVQYRMHPSISRFPYKEF 435
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKIL 737
Y +I D ANV+ Y+K++L G FG++SFIN+ G+E+F S +N+VEV+ V +I+
Sbjct: 436 YGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEEFGDGDSPKNMVEVAVVSEII 495
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG--FTVKVKSIDGFQGGEE 795
L+K K K+S+GV++PY QV AI+++I +Y + G FTV V+S+DGFQGGEE
Sbjct: 496 SNLFKVSRERKMKMSVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEE 555
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
DIIIISTVR N+ G +GF+S QR NVALTRARHCLW++G+E TL S SIW L+ D+K
Sbjct: 556 DIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLARSGSIWANLISDSK 615
Query: 856 ARQCFFNADEERNLAKA 872
R+CF++A +++ L A
Sbjct: 616 RRKCFYDAKDDKRLRDA 632
Score = 296 (109.3 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 64/149 (42%), Positives = 91/149 (61%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
SS LN SQ A+L+CL D H++ V+LIWGP KTKTV+ LLL LL+++C+T+ C
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCA 257
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPG--FEEIYLN 371
PTN AI E+ SR+L L Y + LG+I L GN+ R+++ ++L+
Sbjct: 258 PTNTAIVEVTSRLLAL-SNKYSEHATYG-----LGNIFLAGNQKRMRIKDTDYLRNVFLD 311
Query: 372 YRIKKLRECFAPLSGWRHCFSSMIDLLED 400
+RI KLR+ F GW+ S+IDLLE+
Sbjct: 312 HRISKLRKLFLSTCGWKQSLESIIDLLEN 340
Score = 174 (66.3 bits), Expect = 2.5e-122, Sum P(3) = 2.5e-122
Identities = 40/136 (29%), Positives = 76/136 (55%)
Query: 31 VFSWSLEDIFSQSFFKDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPY 90
+FSWS+EDI ++ +K +++ IP+ F SV +Y FV LLEETR +L + +++ +A
Sbjct: 13 IFSWSMEDILNKDLYKQKIKTIPDKFSSVNEYLKCFVPHLLEETRTELSTSFKSLSKAHL 72
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISN--SGKEPYKTLPGDILVLADFKPEKVSDLR 148
++ + E + + ++ ++ +I++ S +E Y+ GD++ L +P V DL
Sbjct: 73 FEISSLETMTKESSGSLSNKL-FYDMSINDALSIREKYQPKCGDLIALTKERPRGVDDLN 131
Query: 149 RVGRTWTFVSVTTVPD 164
+ +SV T P+
Sbjct: 132 PL--LLGSISVDTYPN 145
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 1135 (404.6 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 282/688 (40%), Positives = 409/688 (59%)
Query: 172 ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMC-GNWKVITQVLGTDSVV 230
E + V + ++ + ++ F +L + N RIW +LH GN +I VL ++
Sbjct: 28 ELHFSVHSSKSISIDEQYSFRSGF-FLIYLTTNTRIWKALHNGDGNLSLIKSVLQANTAD 86
Query: 231 DERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTG 290
E+ SV + + S+ LN SQ A+LACL + ++ V+LIWGPPGTG
Sbjct: 87 TEQ----SVSSRNWGNHVLDIIRSANLNSSQESAILACLETREIRDKTSVKLIWGPPGTG 142
Query: 291 KTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDI 350
TKTV+ LL LL + C+T+ CTPTN A+ +ASR+L L KES S + LG+I
Sbjct: 143 NTKTVATLLFALLSLSCKTVVCTPTNTAVVAVASRLLALFKES----SSTEHSTYGLGNI 198
Query: 351 LLFGNKDRLKV----NPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYH 406
+L GN+ R+ + N ++L+ RI KL E F+P + W ++ID+LE+ S Y
Sbjct: 199 VLVGNRVRMGIDERGNDDLLNVFLDDRISKLGELFSPSNEWERSLEAVIDILENAESSYK 258
Query: 407 IYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFL--KYVRERFKCAVVSLRNCIFIF 464
Y+ L ER++ NQ E K T + K FL K E+ + +++ F+
Sbjct: 259 KYL-LLSERKE---NQ-ETKNIL--TAFGEFVMKMFLGSKETPEKEEEIILTFGE--FVM 309
Query: 465 CTHLPKSYISENSFQEMVALKSLLD-SF-GNLLFQDNVVSKE-LEKLFSHSVDEGISWAF 521
S + ++MV L + L SF + ++ +V+++ L + + ++ S+ F
Sbjct: 310 EKFDGLSETMKKIQKDMVDLYTHLPKSFLSSNDVKNMIVARQALRQARTFLQEKQGSFTF 369
Query: 522 VRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSY 581
+ + +CL LR L + +P K + FC + A + F TAS +
Sbjct: 370 DCFNKFVCV-----DCLRTLRLLSKRFE---IPALLMKEDIRTFCLQNAHIIFCTASGAA 421
Query: 582 KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAG 641
++ + ++ LV+DEAAQLKE ES LQL G++HAVLIGDE QLPAMV+S++ ++A
Sbjct: 422 EMTAERAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAK 481
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
F RSLFERL SL H KHLLN+QYRMHPSISLFPN++FY +I D VK +Y+K++L G
Sbjct: 482 FVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQG 541
Query: 702 TEFGTYSFINIIGGREDF-IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYT 760
FG++SFIN+ G+E+F HS +N+VE++ V +IL L K +K K+S+GV+SPY
Sbjct: 542 NMFGSFSFINVGLGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYK 601
Query: 761 AQVVAIRKKIGFEYEN-KDG-FTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQ 818
AQV AI+++IG +Y + D FT+ V+S+DGFQGGEEDIIIISTVR N G+IGF+S Q
Sbjct: 602 AQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQ 661
Query: 819 RVNVALTRARHCLWILGSERTLISSESI 846
R NVALTRARHCLW++G+ERTL S SI
Sbjct: 662 RANVALTRARHCLWVIGNERTLSLSGSI 689
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 464 (168.4 bits), Expect = 5.0e-45, Sum P(3) = 5.0e-45
Identities = 120/319 (37%), Positives = 169/319 (52%)
Query: 552 NLPCTTSKLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIP 610
N ++ LE A + F+T SSS KL S + +VIDEAAQ E P
Sbjct: 735 NFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPP 794
Query: 611 LQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI 670
L L G VL+GD QLPA V SK + + RSLFER LL +QYRMHP I
Sbjct: 795 LAL-GAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQI 853
Query: 671 SLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIV 728
FP+ FY+ ++ D ++ S ++ Y Y F NI GRE S N+
Sbjct: 854 RDFPSRYFYQGRLKDSESISSAP-DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVD 912
Query: 729 EVSAVIKI---LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
E + + LQK K+ +G+ KVS+GV++PY Q+ ++ + G + + +
Sbjct: 913 EARFCVGVYMHLQKTLKS-LGAG-KVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYIN 970
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
++D FQG E D+II+S VR + G +GF+S +R+NVALTRAR LW++G+ L+ SE
Sbjct: 971 TVDAFQGQERDVIIMSCVRAS-GHGVGFVSDIRRMNVALTRARRALWVMGNASALMKSED 1029
Query: 846 IWGALVCDAKARQCFFNAD 864
W AL+ DA+ R CF D
Sbjct: 1030 -WAALISDARGRNCFMEMD 1047
Score = 95 (38.5 bits), Expect = 5.0e-45, Sum P(3) = 5.0e-45
Identities = 67/287 (23%), Positives = 109/287 (37%)
Query: 36 LEDIFSQSFFKD----QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSG-LEAMRRAPY 90
+ ++ ++ F++ ++ +PE F+S+++Y F L EE R QL S +E Y
Sbjct: 237 IREVTNEKFWRHPEDTELRSVPERFESMEEYVRVFEPLLFEECRAQLYSTWVELAEANTY 296
Query: 91 AQVIAFEELKPYGTNQYGIEVDYWRNTISNS--G-KEPYKTLPGDILVLADFKPEKVSDL 147
+V +K + G W + I NS G K +K GD+ VL+ PE D
Sbjct: 297 VKV----RIKSIERRERG-----WYDVILNSLNGCKWAFKE--GDVAVLSTPLPESDEDH 345
Query: 148 RRVGRTWTFVSVTTVPDDEDENKKENRYKV--KARNNMQVHD-------KTKKSFFFIYL 198
GR V D D + V ++ D K + + L
Sbjct: 346 EDAGRVAGTVRRHIPVDTRDPRGATLHFYVGNSGGTGSKIDDSHILRKLKPQDIWHLTVL 405
Query: 199 TNILPNKRIWNSLHMCG--NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSST 256
++ +R + +LH N ++ +L E + + F +
Sbjct: 406 GSLATTQREYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRS 465
Query: 257 LNESQVGAMLACLRRLDCGHRSGVE--------LIWGPPGTGKTKTV 295
N Q+ A+ G SGV+ L+ GPPGTGKT TV
Sbjct: 466 FNAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTV 512
Score = 61 (26.5 bits), Expect = 5.0e-45, Sum P(3) = 5.0e-45
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 300 LTLLRIKCRTLACTPTNVAITELASRVL 327
L L K R L C P+N A EL SRVL
Sbjct: 572 LPKLCAKPRMLVCAPSNAATDELLSRVL 599
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 453 (164.5 bits), Expect = 2.1e-44, Sum P(2) = 2.1e-44
Identities = 117/309 (37%), Positives = 166/309 (53%)
Query: 562 LEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAV 620
LE A + F+T SSS KL S + +VIDEAAQ E PL L G V
Sbjct: 908 LEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLAL-GAARCV 966
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
L+GD QLPA V SK + + RSLFER LL +QYRMHP I FP+ FY+
Sbjct: 967 LVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 1026
Query: 681 NQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSC--RNIVEVSAVIKI-- 736
++ D +V S + ++ Y + Y F +I GRE S NI E + +
Sbjct: 1027 GRLTDSESV-STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYL 1085
Query: 737 -LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
LQ+ K+ G K VS+GV++PY Q+ ++ + G + + + ++D FQG E
Sbjct: 1086 HLQRTLKSLGGGK--VSVGVITPYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQER 1143
Query: 796 DIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
D+II+S VR + G +GF++ +R+NVALTRA+ LW++G+ L+ E W AL+ DAK
Sbjct: 1144 DVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCED-WAALITDAK 1201
Query: 856 ARQCFFNAD 864
AR CF +
Sbjct: 1202 ARNCFMEME 1210
Score = 114 (45.2 bits), Expect = 2.1e-44, Sum P(2) = 2.1e-44
Identities = 89/345 (25%), Positives = 140/345 (40%)
Query: 36 LEDIFSQSFF---KD-QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA-PY 90
L ++ ++ F+ +D ++ +PE F+S+ +Y F L EE R QL S E + A Y
Sbjct: 401 LREVTNEKFWHHPEDTDLQSVPERFESMDEYVRVFEPLLFEECRAQLYSTWEELAEANSY 460
Query: 91 AQV-IAFEELKPYGTNQYGIEVDYWRNTISNSGKE-PYKTLPGDILVLADFKPEKVSDLR 148
+V I F E + G W + I NS E + GD+ VL++ PE +
Sbjct: 461 MKVRIKFIERRERG----------WYDVILNSVNECKWAFKEGDVAVLSNPVPESEGEHD 510
Query: 149 RVGRTWTFVSVTTVPDDEDENKKENRYKVKAR--NNMQVHD-------KTKKSFFFIYLT 199
VGR V D D + + V + ++ D K K+ + L
Sbjct: 511 DVGRVAGTVRRYIPVDTRDPHGAILHFYVGDAYDSGSKIDDNHILRKLKPKEIWHLTVLG 570
Query: 200 NILPNKRIWNSLHMCG--NWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTL 257
+I +R + +LH N ++ +L E+ Q D F PSF+ L
Sbjct: 571 SIATTQREYVALHAFSQLNPQMQNAILKPSP---EQFPNYGEQTPTVPD-CFTPSFAGHL 626
Query: 258 NESQVGAMLACLR----RLDCGHRSGVE--------LIWGPPGTGKTKTVSMLLLTLLRI 305
+ S LA + G SGV+ L+ GPPGTGKT TV +L + +
Sbjct: 627 HRSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLV 686
Query: 306 KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDI 350
+ + S + KL ESYK+ + S++ G I
Sbjct: 687 QYQQY-----------YTSLLKKLAPESYKQVNESSSDNIVSGSI 720
Score = 61 (26.5 bits), Expect = 5.0e-38, Sum P(3) = 5.0e-38
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 300 LTLLRIKCRTLACTPTNVAITELASRVL 327
L L K R L C P+N A EL SRVL
Sbjct: 735 LPKLCAKPRMLVCAPSNAATDELLSRVL 762
Score = 44 (20.5 bits), Expect = 5.0e-38, Sum P(3) = 5.0e-38
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 161 TVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWN 209
T D + NKK +K +A N+ Q D + + L + N++ W+
Sbjct: 368 TSADSKFGNKKFTSFKKQATNSTQYQDTSVER-----LLREVTNEKFWH 411
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 440 (159.9 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 114/316 (36%), Positives = 177/316 (56%)
Query: 569 RASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
R+ + ST S S Y K + +++DEAAQ E + IPL+ + +L+GD Q
Sbjct: 1584 RSQIILSTLSGSGYDYLFTATKNFDLVIVDEAAQAVELSTLIPLR-HDVKKCILVGDPQQ 1642
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP SK++ + + SLF+RL + + +L QYRMHP IS FP+ FYR ++ DG
Sbjct: 1643 LPPTTISKVATKFQYEISLFQRLMNCGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK 1702
Query: 688 NVKSKSYEKQYL--TGTEFGTYSFINIIG--GREDFIYHSCRNIVEVSAVIKILQKLYKA 743
NV+ Y++ Y + + FG F ++ G + S RN EV I+ +L
Sbjct: 1703 NVRE--YKQDYYNDSASRFGPLVFYDLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISN 1760
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFE-YENKDGFTVKVKSIDGFQGGEEDIIIIST 802
+ +K + IGV++PY +Q V + F+ Y+N V+V +IDGFQG E+D +I S+
Sbjct: 1761 YPNTKD-LEIGVITPYKSQSVDLFN--AFKGYQN-----VEVSTIDGFQGKEKDFVIFSS 1812
Query: 803 VRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK-ARQCFF 861
VR ++G SIGF+S +R+NV LTRA++ + ILG+ +L+S+ WG LV D + C+F
Sbjct: 1813 VRAHSGHSIGFLSDIRRMNVGLTRAKYSMVILGNS-SLLSNNDDWGNLVNDLRQTNNCYF 1871
Query: 862 NADEERNLAKARLEVS 877
+++ K LE S
Sbjct: 1872 PISS-KSIDKGVLEKS 1886
Score = 143 (55.4 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 49/163 (30%), Positives = 80/163 (49%)
Query: 198 LTNILPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTL 257
+T++ R + +LHM G + T ++ ++ S + +K S+L
Sbjct: 1316 VTSLSTISREYMALHMVGKIPLGTSIISPHLYINSNDSSSSTFKI---PDKLFQKLRSSL 1372
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLL---LTLL-RIKC-----R 308
NESQ+ A+ + L+ L G L+ GPPGTGKTKT+ LL T+L I+ +
Sbjct: 1373 NESQLSAIASTLKNL-----GGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPK 1427
Query: 309 TLACTPTNVAITELASRVLK--LVKESYKRDSRSNTPICPLGD 349
L C P+N A+ E+A R+ K L+ K ++ IC +G+
Sbjct: 1428 ILVCAPSNAAVDEIALRIKKDGLID---KNGNKFKPVICRIGN 1467
Score = 53 (23.7 bits), Expect = 1.2e-34, Sum P(3) = 1.2e-34
Identities = 18/84 (21%), Positives = 45/84 (53%)
Query: 273 DCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKL-VK 331
+CG R+ E+++ + + +L+L L + + C P ++ + E++S + +L ++
Sbjct: 323 NCGPRNFAEILFSSFLLSRNEQTQLLILQLFSVFMKD--CCPQSL-LAEISSYISELFLR 379
Query: 332 ESYKRD---SRSNTPICPLGDILL 352
+++ +D S + + + DILL
Sbjct: 380 KAFTQDGAYSIKSGSLLLIVDILL 403
Score = 51 (23.0 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 48 QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLE 83
+++ +P +F +K Y F L+EE R Q+ L+
Sbjct: 1156 ELKPVPGTFDDLKHYIDIFQPLLIEEFRAQVIRNLD 1191
Score = 42 (19.8 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 1715 NNGNHGNSVKYQVGTSKDVPSKRSASLPE-DMDAQNMNDDTLAMDLDQ 1761
NN N+ N K + + +D S R + D D + +D D D+
Sbjct: 1947 NNSNNNNGGKNEQNSGRDADSGRDRDKSDRDRD-YDRSDSRGGRDRDR 1993
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 448 (162.8 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 107/284 (37%), Positives = 169/284 (59%)
Query: 568 KRASLFFSTASSSYKLHSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+ A++ FST S+S SV N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1508 RNANIVFSTLSASGS-GSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPL 1566
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLP + S S E G SLFERL+ + + +LN QYRMHP+IS FP+ QFY++++LDG
Sbjct: 1567 QLPPTIFSSGSAENGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLDG 1625
Query: 687 ANVKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
NVKS Y + + + ++G F ++I +E+ S +N +E++ V +++KL + +
Sbjct: 1626 DNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYP 1685
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
K K S G+++PY Q I+++ F Y ++ +IDG QG E+DIII+S VR
Sbjct: 1686 ECK-KFSFGIITPYKLQKSEIKEQHKQFNYP----LNIETSTIDGVQGSEKDIIILSCVR 1740
Query: 805 CNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1741 SER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1780
Score = 124 (48.7 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 32/74 (43%), Positives = 42/74 (56%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTP 314
LN SQ A+ L + G+ LI GPPGTGKT T+ LL LL I K + L C P
Sbjct: 1395 LNASQFNAIETSLSK------KGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1448
Query: 315 TNVAITELASRVLK 328
++ ++ E+A R LK
Sbjct: 1449 SHASVDEVAKRCLK 1462
Score = 47 (21.6 bits), Expect = 5.3e-35, Sum P(3) = 5.3e-35
Identities = 30/134 (22%), Positives = 59/134 (44%)
Query: 483 ALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLR 542
A+K+ L + + + ++N ++ +EK+++ S+ + F +L ++ C
Sbjct: 978 AIKNRLKTDISKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQYSELKEKTKTCRHKYN 1037
Query: 543 NLWNSLDELN-LPCTTSKLVLEDFCFKRASLFFSTAS--------SSYKL-HSVEIKPLN 592
L + L + N S +V F S F ST S+KL +S ++ ++
Sbjct: 1038 QLNSELAKKNRTKLEFSNIVKGKFFDNLVSNFESTTKINGSTLKIPSFKLLNSEKLGLIS 1097
Query: 593 FLVIDEAAQLKESE 606
L +E QL +SE
Sbjct: 1098 KLQFNEIHQLIKSE 1111
Score = 46 (21.3 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 153 TWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYL 198
T T + TT+ + N NR V R++++V K + I+L
Sbjct: 1119 TGTATATTTIRSRNNNNN--NRKVVLVRDHVEVISKDSEEILSIFL 1162
Score = 45 (20.9 bits), Expect = 5.3e-35, Sum P(3) = 5.3e-35
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 291 KTKTV--SMLLLTLLRIKCRTLACTPTNVAITELASRVLKL-VKESYKRDSRSNTPICPL 347
KTKT S T T T TN + + + + KL + E+ + + + I
Sbjct: 40 KTKTTVESSTTSTTTTTSTTTTTNTNTNSTMDSIINNMNKLNITENSQIINSNENDI--F 97
Query: 348 GDILLFGN-KDRLKVNPGFEEIYLNYRIKKLRE 379
I N KD + G +++ N+ IKK++E
Sbjct: 98 KTIFKHSNLKDIINGINGVCKLFPNFDIKKIKE 130
Score = 44 (20.5 bits), Expect = 6.5e-43, Sum P(3) = 6.5e-43
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 17 SSSSKKAVGFAGHT-VFSWSLEDIFSQSFFKDQVEKIP----ESFQSVKQ-Y-----FGS 65
+++++K V H V S E+I S F K E+IP ++ S++ Y F +
Sbjct: 1134 NNNNRKVVLVRDHVEVISKDSEEILS-IFLKSNPERIPLIQADNIHSLQDSYSDQSEFVN 1192
Query: 66 FVFPLL-EETRMQLRSGLE 83
+ PL+ EE R QL +
Sbjct: 1193 LMKPLIVEEYRAQLEGDFD 1211
Score = 39 (18.8 bits), Expect = 2.8e-34, Sum P(3) = 2.8e-34
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 359 LKVNPGFEEIYLN 371
+KV EEIYLN
Sbjct: 1256 IKVKDELEEIYLN 1268
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 456 (165.6 bits), Expect = 5.2e-43, Sum P(3) = 5.2e-43
Identities = 107/282 (37%), Positives = 168/282 (59%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
RAS+ FST S S + +++DE+ Q E S IPL + I +L+GD QL
Sbjct: 1357 RASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQL 1416
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
P + S S E G SLFERL+ + + +L++QYRMHP+IS FP+ QFYR+++LDG N
Sbjct: 1417 PPTIFSTESAENGLNISLFERLSKVLPVE-MLHVQYRMHPTISRFPSNQFYRDRLLDGDN 1475
Query: 689 VKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
VKS Y + + + ++G F ++I +E+ S +N +E++ V +++KL + +
Sbjct: 1476 VKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDYPEC 1535
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
K K S G+++PY Q I+++ F Y ++ +IDGFQG E+DIII+S VR
Sbjct: 1536 K-KFSFGIITPYKLQKSEIKEQHKQFNYP----LNIETSTIDGFQGSEKDIIILSCVRSE 1590
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1591 R---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1628
Score = 111 (44.1 bits), Expect = 5.2e-43, Sum P(3) = 5.2e-43
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRVLK 328
G+ LI GPPGTGKT T+ LL LL I + + L C P++ ++ E+A R K
Sbjct: 1259 GITLIQGPPGTGKTTTIYYLLSILLAINPEFKILVCGPSHASVDEIAKRCSK 1310
Score = 45 (20.9 bits), Expect = 5.2e-43, Sum P(3) = 5.2e-43
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 164 DDEDENKKENRYKVKARNNMQVH-DKTKKSFF--FIYLTNILPNKRI 207
+DEDE + E+ + RN Q++ D + +F F + L + RI
Sbjct: 380 EDEDEGEDEDEDDIIKRNIYQLYSDYSNLNFLIEFSFFFKRLTSNRI 426
Score = 38 (18.4 bits), Expect = 2.8e-42, Sum P(3) = 2.8e-42
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 46 KDQVEKIPESFQSVKQYFGS 65
K +++IP++ S K GS
Sbjct: 559 KPTIKQIPQTVASTKSVIGS 578
Score = 38 (18.4 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 392 SSMIDLLEDCVSQYHIYVEKLKE 414
S +ID LED + + + K++E
Sbjct: 305 SILIDSLEDIENYFPTFQSKIQE 327
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 456 (165.6 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
Identities = 114/298 (38%), Positives = 176/298 (59%)
Query: 559 KLVLEDFCFKRASLFFSTASSS-YKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAG-- 615
K++LE +S+ FST S+S L KP N +++DEA Q E+ IPL L
Sbjct: 3666 KMILE-----HSSICFSTLSASGSNLVQSSFKP-NVVIVDEATQSCETSCIIPLSLGAKS 3719
Query: 616 INHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
+ +L+GD QLP + SK S G G SLFERL+ + +LN+QYRMHP IS FP+
Sbjct: 3720 MKKLILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVS-MLNVQYRMHPLISKFPS 3778
Query: 676 LQFYRNQILDGANV-KSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVI 734
QFY + + DG NV S +Y ++ ++G F ++ RE+ S +N +E++ V
Sbjct: 3779 SQFYHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREERGKTSIKNQLEITMVF 3838
Query: 735 KILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD-GFTVKVKSIDGFQGG 793
+++KL + +KQ S G+V+PY Q RK+I Y+ + +++K+ID FQG
Sbjct: 3839 TLIKKLTQDHPETKQ-YSFGIVTPYKLQ----RKEIEDAYKQLNLSLNIEIKTIDSFQGS 3893
Query: 794 EEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
E+DI+I+S VR SIGF+S +R+NV++TRA++ L+I+G+ TL+ + WG L+
Sbjct: 3894 EKDIMIMSCVR---NESIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKLDRTWGELI 3947
Score = 130 (50.8 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK--CRTL 310
++ TLNESQ+ A+ L H S + LI GPPGTGKT T++ L+ +L I + L
Sbjct: 3552 YNQTLNESQLAAINESLV-----H-SSITLIQGPPGTGKTHTITSLISIILAINPDFKIL 3605
Query: 311 ACTPTNVAITELASRVL 327
C P++ A+ E+A RV+
Sbjct: 3606 VCGPSHAAVDEVAKRVI 3622
Score = 74 (31.1 bits), Expect = 9.5e-36, Sum P(4) = 9.5e-36
Identities = 31/125 (24%), Positives = 53/125 (42%)
Query: 394 MIDLLEDCVSQYHIYVEKLKERED-CNVNQSEEKECRKETEGSKGERKPFLKYVRERFKC 452
MID ++ C+ Y Y+ LK +D N E +E + + + L+ V F
Sbjct: 2019 MIDSIDSCIGLYPNYLPSLKYLKDFINNYPMEFREYSMKLVVQRERTRMDLRKVLGDFSN 2078
Query: 453 AVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNV----VSKELEKL 508
++ I HL ++ I N+F + + LK +DS + D V VS+ L +
Sbjct: 2079 SLNPQIYKEIIAHAHLHRTLIEFNNFFQRMHLKEFMDSISSYGQNDQVDESDVSRRLNNV 2138
Query: 509 FSHSV 513
S +
Sbjct: 2139 HSKQI 2143
Score = 50 (22.7 bits), Expect = 4.2e-34, Sum P(4) = 4.2e-34
Identities = 46/195 (23%), Positives = 84/195 (43%)
Query: 325 RVLKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLKVNPGF-EEIYLNYRIKKLRECF 381
R L LV+++ + RD R I L + L K +K N E+IY +K+ F
Sbjct: 2570 RNLHLVRQTIESSRD-RLEKKI-KLANKYLVSIKSMIKTNDDLCEDIY-----QKILS-F 2621
Query: 382 APLSGWRHCFSSMI--DLLE--DCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKG 437
L HC+ ++ ++LE + QY+ +E+L + + ++ K TE +K
Sbjct: 2622 KILIETSHCYQRLLLKEILESENDTDQYYSILEQLIQHQRSRKLLFQDFSNHKFTEYTKE 2681
Query: 438 ERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVAL-KSLLDSFG---- 492
+ + + ++L TH S IS +SF E+ L K + +
Sbjct: 2682 FN--YRRSGKTNISIPTLTLPK------THEDVSLISRSSFNEIYLLIKKYQNDYSSYSI 2733
Query: 493 ---NLLFQDNVVSKE 504
N L ++N+++K+
Sbjct: 2734 LSRNSLNRENIINKK 2748
Score = 46 (21.3 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 162 VPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
+ D +D N N Y +N Q +D+ ++ + NILP +
Sbjct: 2223 IEDYDDNNNNNNNYNGSEGDNNQNNDQYFENKMSLR-NNILPGE 2265
Score = 44 (20.5 bits), Expect = 2.4e-42, Sum P(4) = 2.4e-42
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 1034 MNQQFIDSKRHQNIRGEILSSR-MILDFHLHSNASTYHWEDEL 1075
+N I++ R Q I+ ++++ + +I DF + ++ + H +EL
Sbjct: 3959 INSNDIENLREQTIQFDLINPQGLITDFG-NDDSDSEHGSEEL 4000
Score = 43 (20.2 bits), Expect = 4.8e-42, Sum P(4) = 4.8e-42
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 116 NTISNSGKEPYKTLPG-DILVLADFKPEKVSDLRRV-GRTWTFVSVTTVP-DDEDENKKE 172
N +N+ K K++ D + A FK V+ V G + S + DD+D+N E
Sbjct: 2771 NNNNNNNKNNKKSINNNDDIDKAKFKVPTVTSFTYVPGGGYNSNSFYHLDNDDDDDNNDE 2830
Query: 173 N 173
N
Sbjct: 2831 N 2831
Score = 43 (20.2 bits), Expect = 2.9e-34, Sum P(3) = 2.9e-34
Identities = 10/49 (20%), Positives = 26/49 (53%)
Query: 394 MIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPF 442
M+ ++ED +S+Y + ++L+ + +E++ E + ++K F
Sbjct: 21 MVTIVEDIISKYPDFNDELENAKYVLAESKDEQDRTFEQRIAAIKKKAF 69
Score = 42 (19.8 bits), Expect = 6.2e-42, Sum P(4) = 6.2e-42
Identities = 24/123 (19%), Positives = 57/123 (46%)
Query: 77 QLRSGLEAMRRAPYAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPG---DI 133
Q S LE + + ++ + F++ + +Y E +Y R+ +N P TLP D+
Sbjct: 2648 QYYSILEQLIQHQRSRKLLFQDFSNHKFTEYTKEFNYRRSGKTNISI-PTLTLPKTHEDV 2706
Query: 134 LVLADFKPEKVSDLRRVGR----TWTFVSVTTVPDDEDENKKENRYKVKARNNMQVHDKT 189
+++ ++ L + + +++ +S ++ + NKKEN ++ +N ++K
Sbjct: 2707 SLISRSSFNEIYLLIKKYQNDYSSYSILSRNSLNRENIINKKENNREIINNSNNSNNNKN 2766
Query: 190 KKS 192
+
Sbjct: 2767 NNN 2769
Score = 38 (18.4 bits), Expect = 1.6e-41, Sum P(4) = 1.6e-41
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 164 DDEDENKKENRYKVKARNN 182
D+ D N N Y NN
Sbjct: 2829 DENDNNDDNNNYNNNNNNN 2847
Score = 38 (18.4 bits), Expect = 1.6e-41, Sum P(4) = 1.6e-41
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 164 DDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
+DEDE +E+ N++ + K + ++N + N+
Sbjct: 1179 EDEDEENEEDEEDESYENDIDNKNNNKNNNNDFIVSNKIQNQ 1220
Score = 38 (18.4 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 368 IYLNYRIKKLRECFAPLSG---WRHCFSSMIDLLED 400
I++N+ ++RE ++ LS + C ++ + +ED
Sbjct: 2190 IFINHIFNEIRELYSQLSPRLVFDECMNNNNEDIED 2225
Score = 37 (18.1 bits), Expect = 2.0e-41, Sum P(4) = 2.0e-41
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 47 DQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRS 80
+ + K+ + +++ +Y SF L+EE R L +
Sbjct: 3330 NNIVKLLDCYENHMEYKNSFKPILVEEFRKTLET 3363
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 444 (161.4 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 106/285 (37%), Positives = 170/285 (59%)
Query: 568 KRASLFFST--ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDE 625
+ A++ F+T AS S + S K N +++DE+ Q E S IPL + I +L+GD
Sbjct: 1707 RNATIIFATLSASGSKPIRS-NFKA-NIVLVDESTQSSEPASLIPLCIGNIEKLILVGDP 1764
Query: 626 CQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
QLP + S S + G SLFERL+ + + +LN QYRMHP+IS FP+ QFY++++LD
Sbjct: 1765 LQLPPTIFSSESAKNGLNISLFERLSKVLPVE-MLNTQYRMHPTISRFPSNQFYKDRLLD 1823
Query: 686 GANVKSKSYEKQ-YLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
G NVKS Y + + + ++G F ++I +E+ S +N +E++ V +++KL + +
Sbjct: 1824 GDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGKRSLKNKLEITMVFTLIKKLVQDY 1883
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
K K S G+++PY Q I+++ F Y ++ +IDG QG E+DIII+S V
Sbjct: 1884 PECK-KFSFGIITPYKLQKSEIKEQHKQFNYP----LNIETSTIDGVQGSEKDIIILSCV 1938
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
R IGF+S +R+NVALTRA+ L+++G+ + L+ + WG
Sbjct: 1939 RSER---IGFLSDRRRINVALTRAKFGLFVIGNSK-LLKKDRTWG 1979
Score = 121 (47.7 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 32/74 (43%), Positives = 41/74 (55%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTP 314
LN SQ A+ L G+ LI GPPGTGKT T+ LL LL I K + L C P
Sbjct: 1594 LNTSQFSAVETSLST------KGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGP 1647
Query: 315 TNVAITELASRVLK 328
++ ++ E+A R LK
Sbjct: 1648 SHASVDEVAKRCLK 1661
Score = 54 (24.1 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 33/150 (22%), Positives = 67/150 (44%)
Query: 470 KSYISENSFQ---EMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRY 526
++ I+E+ Q + +K L + + + ++N ++ +EK+++ S+ + F
Sbjct: 1160 RNIINESKIQFNTNINGIKHRLKTDFSKIQKNNTSNQNIEKIYNKSLSLMVLLEFNHFSQ 1219
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELN-LPCTTSKLVLEDFCFKRASLFFSTAS------- 578
+L ++ C L L + L + N + S +V F S F ST
Sbjct: 1220 YSELREKTKTCRQYLNQLNSELAKNNKMKLEFSDIVKGKFFDNLVSNFESTTKINGSTLK 1279
Query: 579 -SSYKL-HSVEIKPLNFLVIDEAAQLKESE 606
S+KL +S ++ ++ L +E QL +SE
Sbjct: 1280 IPSFKLLNSEKLGLISKLQFNEIYQLIKSE 1309
Score = 49 (22.3 bits), Expect = 9.5e-36, Sum P(2) = 9.5e-36
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 484 LKSLLDSFGNLL-FQDNVVSKELEKLFSHSVDE 515
LKS S GN + + +N+ SKE+ F + V +
Sbjct: 261 LKSNQTSLGNKIEYTENIASKEISDKFRNLVQK 293
Score = 41 (19.5 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 356 KDRLKVNPGFEEIYLN 371
K +KV EEIYLN
Sbjct: 1453 KFNIKVKDELEEIYLN 1468
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 17 SSSSKKAVGFAGHT-VFSWSLEDIFSQSFFKDQVEKIP----ESFQSVKQ-Y-----FGS 65
++++ K V H V S E+I S F K E+IP ++ S++ Y F +
Sbjct: 1334 NNNNGKVVLVRDHVEVISKDSEEILS-IFLKSSPERIPLIQADNIHSLQDSYSDQSEFVN 1392
Query: 66 FVFPLL-EETRMQL 78
+ PL+ EE R QL
Sbjct: 1393 LMKPLIVEEYRAQL 1406
Score = 39 (18.8 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 485 KSLLDSFGNLL-FQDNVVSKELEKLFSHSVDEGI 517
K + S NLL Q + +LEKL S ++ +
Sbjct: 666 KRIHPSLFNLLEIQHQSLKIDLEKLISQTISSNV 699
Score = 37 (18.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 478 FQEMVALKSLLDSFGNLLFQDNVVS 502
+ E +A K + D F NL+ + ++++
Sbjct: 274 YTENIASKEISDKFRNLVQKKDLLN 298
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 410 (149.4 bits), Expect = 8.6e-41, Sum P(3) = 8.6e-41
Identities = 102/283 (36%), Positives = 154/283 (54%)
Query: 568 KRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
K AS+ FST A S K P + ++IDE+ Q E S IPL L + +L+GD
Sbjct: 1305 KSASIVFSTLAGSGSKAIFENFSP-DIVLIDESTQSSEPTSIIPLSLGSVKKLILVGDPV 1363
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLP + SK + G SLFERL + LN QYRMHP S F + +FY + DG
Sbjct: 1364 QLPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYRMHPVTSKFISEEFYNGTLKDG 1422
Query: 687 ANVKSKSYEK-QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
NV SY ++ FG F ++ + I S N E+ V ++++L + +
Sbjct: 1423 ENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKKSIMNQDEIDKVFTLIKELIEKYP 1482
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
K K+S G+++PY Q+ I++++ E+ N + V +IDG QG E+DIII+S VR
Sbjct: 1483 ECK-KLSFGIITPYKLQMNQIKEQLNRSEHHN---LNISVSTIDGVQGSEKDIIIMSCVR 1538
Query: 805 CNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
IGF+S +R+NVALTRA+ L+++G+ + L + ++ W
Sbjct: 1539 SIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVL-AKDNTW 1580
Score = 140 (54.3 bits), Expect = 8.6e-41, Sum P(3) = 8.6e-41
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 248 KFGPSFSST----LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
KF P+ + LNESQ+ A+ + L SG+ LI GPPGTGKT T++ LL LL
Sbjct: 1180 KFPPTLETICKEKLNESQLNAIKSSLVE------SGITLIQGPPGTGKTTTINYLLSVLL 1233
Query: 304 RI--KCRTLACTPTNVAITELASRVLK 328
I K + L C P++ ++ E+A R LK
Sbjct: 1234 AIDKKFKILVCGPSHASVDEVAKRCLK 1260
Score = 41 (19.5 bits), Expect = 8.6e-41, Sum P(3) = 8.6e-41
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 164 DDEDENKKENRYKVKARNNM 183
DD+D++ EN ++ NN+
Sbjct: 249 DDDDDDDDENNDEITIFNNI 268
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 430 (156.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 104/317 (32%), Positives = 168/317 (52%)
Query: 568 KRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
+ A++ F+T S S L + + + ++IDEAAQ E + IPL L+GD
Sbjct: 460 EEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATR-CKQVFLVGDPK 518
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG 686
QLPA V S ++ ++G+G S+FERL + +L QYRMHP I FP+ QFY + DG
Sbjct: 519 QLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDG 578
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDF---IYHSCRNIVEVSAVIKILQKLYKA 743
+++++++ + + FG + F +I G+E S N+ EV V+ I +L
Sbjct: 579 SDIEAQT-TRDWHKYRCFGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTM 637
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ K + ++SPY QV + + + + V + ++DGFQG E+D+ I S V
Sbjct: 638 YPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCV 697
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNA 863
R N G IGF+S +R+NV +TRA+ + ++GS TL S+ +W L+ A+ R F
Sbjct: 698 RANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWKNLIESAEQRNRLFKV 756
Query: 864 DEERN--LAKARLEVSK 878
+ N ++ LE K
Sbjct: 757 SKPLNNFFSEENLETMK 773
Score = 90 (36.7 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 74/318 (23%), Positives = 132/318 (41%)
Query: 46 KDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTN 105
K+++ + +++ V YF +F L EE + Q+ + + + E + G +
Sbjct: 44 KEKLNVVKNTYKDVDDYFETFEPLLFEEVKAQILQNKDGEEASVCKMRLVMECNEGEGFH 103
Query: 106 ----QYGIEVDYW--RNTISNSGKEPYK--TLPGDI-LVLADFKPEKVSDLRRVGRTWTF 156
Y E D + +N + KE K + P + + + + LR
Sbjct: 104 FLLVTYEHEEDEYLAQNDLLLLSKEEVKGNSFPSSYGFAVVEHRQNNLLRLRMY-LAEDI 162
Query: 157 VSVTTVPDDEDENKKENRYK--VKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMC 214
V +T +N K +R K ++A +NM +S + I +KR++ SL +C
Sbjct: 163 VQIT-------KNTKSSRTKSFIQALSNM-------RSLITSSASPI--DKRVF-SLKLC 205
Query: 215 GNWKVITQVLGTDSV--VDERCELCSVQRK--GQWDEKF---GPS---FSSTLNESQVGA 264
G +I + + SV + + + + K G DE + GP F+ LN+SQ A
Sbjct: 206 GLSTIIREYIALRSVSSLPFKDLIFTAAEKSCGFGDEAWKISGPLNEFFNENLNKSQKEA 265
Query: 265 MLACLRRLDCG-HRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELA 323
+D G R LI GPPGTGKT+T+ +L ++ T A + E+
Sbjct: 266 -------IDVGLSRKSFVLIQGPPGTGKTQTILSILGAIMHA---TPARVQSKGTDHEVK 315
Query: 324 SRVLKLVKESYKRDSRSN 341
+ ++E Y R++
Sbjct: 316 RGIQMTIQEKYNHWGRAS 333
Score = 53 (23.7 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 304 RIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNT 342
+ + R L C P+N A+ E+ R+L S RD + T
Sbjct: 372 KYRLRVLVCAPSNSALDEIVLRLLS----SGLRDENAQT 406
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 399 (145.5 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 117/353 (33%), Positives = 181/353 (51%)
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVL----EDFCFKRASLFFSTA--SSSYKLHSVEIKPL 591
L L L N + EL++ T + L L E +A + T ++ +L K +
Sbjct: 543 LKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTV 602
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERL 650
+IDE+ Q E E IP+ + G +L+GD QL P +++ K +D AG +SLFERL
Sbjct: 603 ---LIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERL 657
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L H L +QYRMHP +S FP+ FY + +G + E+ T
Sbjct: 658 VFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMF 717
Query: 711 NIIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVA 765
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q +V
Sbjct: 718 WANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQ 774
Query: 766 IRKKIGFEYENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVAL
Sbjct: 775 FMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 834
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVS 877
TRA++ L ILG+ R+L + +W L+ + + C + + NL + ++++
Sbjct: 835 TRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD-NLQLSMVQLN 885
Score = 116 (45.9 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 431 KKFSHPKLTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 483
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRL 359
K + L C P+NVA+ LA+++ L +V+ + K D S+ L +++ K L
Sbjct: 484 KQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGEL 543
Query: 360 K 360
K
Sbjct: 544 K 544
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 399 (145.5 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 117/353 (33%), Positives = 181/353 (51%)
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVL----EDFCFKRASLFFSTA--SSSYKLHSVEIKPL 591
L L L N + EL++ T + L L E +A + T ++ +L K +
Sbjct: 543 LKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTV 602
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERL 650
+IDE+ Q E E IP+ + G +L+GD QL P +++ K +D AG +SLFERL
Sbjct: 603 ---LIDESTQASEPEVLIPI-VKGAKQVILVGDHQQLGPVILDKKAAD-AGLKQSLFERL 657
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
L H L +QYRMHP +S FP+ FY + +G + E+ T
Sbjct: 658 VFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMF 717
Query: 711 NIIGGREDFIY--HSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVA 765
GRE+ +S N VE V KI+ KL+K + +Q IGV++PY Q +V
Sbjct: 718 WANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKPEQ---IGVITPYEGQRAYLVQ 774
Query: 766 IRKKIGFEYENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ +D + V++ S+D FQG E+D II+S VR N SIGF+S P+R+NVAL
Sbjct: 775 FMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVAL 834
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVS 877
TRA++ L ILG+ R+L + +W L+ + + C + + NL + ++++
Sbjct: 835 TRAKYGLVILGNPRSLCRNR-LWNHLLIHFREKGCLVDGPLD-NLQLSMVQLN 885
Score = 116 (45.9 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+KF + LN SQ A+ L+R + LI GPPGTGKT T + ++ L ++
Sbjct: 431 KKFSHPKLTELNVSQTNAVRTVLQR-------PLSLIQGPPGTGKTVTSATIIYHLSKLN 483
Query: 306 KCRTLACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRL 359
K + L C P+NVA+ LA+++ L +V+ + K D S+ L +++ K L
Sbjct: 484 KQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGEL 543
Query: 360 K 360
K
Sbjct: 544 K 544
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 410 (149.4 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 110/282 (39%), Positives = 154/282 (54%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+P + ++IDEA+Q KE+E+ IP+ L +L+GD QLP V S+ + E GF +SL
Sbjct: 1953 EPFSCVIIDEASQAKETETLIPM-LYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMA 2011
Query: 649 RLTSLNHSKH-------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
RL H + LL++QYRMHP I FP+ Y + + + K +
Sbjct: 2012 RLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALKNDCETAQKRCSLSW--- 2068
Query: 702 TEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
F Y +++ GRE S N EVS V +L+ L K +Q V +GV++PY A
Sbjct: 2069 -PFKPYKVFDVMDGRETKERDSFINHKEVSLVGLLLKLLCK-----EQAVRVGVITPYNA 2122
Query: 762 QVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFISKPQRV 820
Q I I NK V+V ++DGFQG E D II+S VR ++ GSIGF+ QR+
Sbjct: 2123 QKHRILDAIKTSGINKQ-LQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRM 2181
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFN 862
NV +TRA+ L+ILG RTL +S WGAL+ DA R+C N
Sbjct: 2182 NVTITRAKFSLFILGHLRTL-REQSDWGALIEDAGRRECIIN 2222
Score = 121 (47.7 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 57/218 (26%), Positives = 94/218 (43%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI----------------KCRTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL + R L C P+N AI L +
Sbjct: 1741 LIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSLMKK 1800
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIK-KLRECFAPL 384
V+ + KE + N P GDI L + ++ + L+++ K + + +
Sbjct: 1801 VILIFKEKCRN---INAPQGNCGDINLVRLGNERTISKSLKPFSLDHQTKARAQRAQQTV 1857
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLK 444
H +D + + +S +K E N+ + ++K+ KE EG + K +
Sbjct: 1858 ESDVHRRKEQLDQMIENLSHQCAKTQK-NSTEFKNLLE-QKKQFLKEREGLSRQIKE-CR 1914
Query: 445 YVRERFKCAVVSLRNCIFIFCT-HLPKSYISENSFQEM 481
R+ + V L+N I CT S + EN+F+ +
Sbjct: 1915 GRRQESQALV--LQNAHVICCTLSTSGSIVLENAFRRL 1950
Score = 45 (20.9 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLL 71
++++P +F S +YF + ++PLL
Sbjct: 1520 LKEVPVNFSSYLEYFNT-LYPLL 1541
Score = 37 (18.1 bits), Expect = 6.8e-30, Sum P(3) = 6.8e-30
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 428 CRKETEGSKGERKPFLKYVRERFKCAVV 455
C T GS F + E F C ++
Sbjct: 1933 CTLSTSGSIVLENAFRRLGHEPFSCVII 1960
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 376 (137.4 bits), Expect = 3.6e-38, Sum P(2) = 3.6e-38
Identities = 97/271 (35%), Positives = 150/271 (55%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IP+ + G +L+GD QL P ++E K +D AG +SLFERL S
Sbjct: 569 VLIDESTQASEPECLIPI-VKGAKQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLIS 626
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L +QYRM+P +S FP+ FY + +G ++ ++ G
Sbjct: 627 LGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWA 686
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
GRE+ + S N +E +I+ KL++ V +Q IGV++PY Q I + +
Sbjct: 687 NYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQ---IGVITPYEGQRAYILQYM 743
Query: 771 GFEYE-NKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
+KD + V+V S+D FQG E+D II+S VR N +IGF+ P+R+NV LTRA+
Sbjct: 744 QMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAK 803
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQC 859
+ L ILG+ R+L + ++W L+ + + C
Sbjct: 804 YGLVILGNPRSL-ARNTLWNHLLIHFREKGC 833
Score = 129 (50.5 bits), Expect = 3.6e-38, Sum P(2) = 3.6e-38
Identities = 43/117 (36%), Positives = 64/117 (54%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRT 309
P+F+ LN SQ A+ L+R + LI GPPGTGKT T + ++ L +I K R
Sbjct: 404 PNFAQ-LNSSQSNAVSHVLQR-------PLSLIQGPPGTGKTVTSATIVYHLSKIHKDRI 455
Query: 310 LACTPTNVAITELASRV----LKLVKESYK--RDSRSNTPICPLGDILLFGNKDRLK 360
L C P+NVA+ LA+++ LK+V+ + K D S+ L +++ G K LK
Sbjct: 456 LVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGELK 512
Score = 38 (18.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 413 KEREDCNVNQSEEKECRKETEGSKGERKPFLK 444
K RED + S G+KGE K LK
Sbjct: 485 KSREDVESSVSNLALHNLVGRGAKGELKNLLK 516
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 449 (163.1 bits), Expect = 4.0e-38, Sum P(3) = 4.0e-38
Identities = 128/396 (32%), Positives = 218/396 (55%)
Query: 491 FGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDE 550
+ +++ + + + ++LEK S + I A +R+ + + + L +R S +
Sbjct: 1414 YDSIIKKRDSLREDLEKFRSTGKNSSILEAQLRE--ITKQKNMLEQSLDDMRERQRSTNR 1471
Query: 551 LNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKP-LNF--LVIDEAAQLKESES 607
NL K +++ + A + +T S+S H + + L F ++IDEAAQ E S
Sbjct: 1472 -NLDVL--KKQIQNQLLQEADIVCATLSASG--HELLLNAGLTFRTVIIDEAAQAVELSS 1526
Query: 608 TIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL-NHSKHLLNIQYRM 666
IPL+ G V++GD QLP V SK S + G+ +SL+ R+ N S LL+IQYRM
Sbjct: 1527 IIPLKY-GCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRM 1585
Query: 667 HPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRN 726
+P IS FP+ FY +++LDG N+ + + + + + G Y F N+ G S N
Sbjct: 1586 NPEISRFPSKFFYNSKLLDGPNMSAVT-SRPWHEDPQLGIYRFFNVHGTEAFSNSKSLYN 1644
Query: 727 IVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKS 786
+ E S ++ + ++L + ++ + IGVV+PY +QV +R + +Y + + + +
Sbjct: 1645 VEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHT 1704
Query: 787 IDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESI 846
+DGFQG E+DIII S VR + G IGF+ +R+NVALTRA+ L+I+G+ + L+ E I
Sbjct: 1705 VDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQ-EDI 1763
Query: 847 WGALVCDAKARQCF--FNADEERNLAKARLEVSKEL 880
+ +L+ DAK R + +A++ +N +K+ VS L
Sbjct: 1764 FYSLIEDAKTRGVWRDLSANQFKN-SKSISNVSTHL 1798
Score = 70 (29.7 bits), Expect = 4.0e-38, Sum P(3) = 4.0e-38
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 279 GVELIWGPPGTGKTKTV 295
G LI GPPGTGKTKT+
Sbjct: 1287 GFTLIQGPPGTGKTKTI 1303
Score = 48 (22.0 bits), Expect = 4.0e-38, Sum P(3) = 4.0e-38
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 306 KCRTLACTPTNVAITELASRV 326
K + L C P+N AI E+ R+
Sbjct: 1331 KNKILICAPSNAAIDEILLRI 1351
Score = 40 (19.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 478 FQEMVALKSLLDSFGNLLFQDNVVSKELEK 507
F +++ + ++ DS L +D +K++EK
Sbjct: 650 FNKLI-INTIFDSVDGLTSKDATFAKQVEK 678
Score = 39 (18.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 455 VSLRNCIFIFCTHLPKSYIS--ENSFQEMVAL--KSL------LDSFGNLL-----FQDN 499
V++R C+F+F Y+ + E + L K + LD F +L F N
Sbjct: 54 VAVRECLFLFSFQNDNEYLVWFKKHLNERLQLCPKCIVKYHQSLDDFKSLCLNIFHFDPN 113
Query: 500 VVSKELEKLFSHSV 513
+ +EK++S +
Sbjct: 114 TLEIVMEKIYSWDI 127
Score = 38 (18.4 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 416 EDCNVNQSEEKECRKETEGSKG 437
+D N + S+E E E S G
Sbjct: 978 DDKNTSTSDEDTSESEEESSNG 999
Score = 37 (18.1 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 358 RLKVNPGFEEIY 369
RL++NP +E Y
Sbjct: 1052 RLRLNPDVQEFY 1063
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 380 (138.8 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 119/357 (33%), Positives = 179/357 (50%)
Query: 527 LLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSV 586
L++L+Q +SE L L +S DE L T E A + T +
Sbjct: 527 LIKLNQLKSE-LGEL----SSQDEKRLKQLTRAAERE--ILNNADVICCTCVGAGDPRLA 579
Query: 587 EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSL 646
++K ++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SL
Sbjct: 580 KLK-FRTVLIDESTQSAEPECMIPLVL-GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSL 637
Query: 647 FERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFG 705
FERL L S LN+QYRMHP +S FP+ FY + +G + E +
Sbjct: 638 FERLVILGCSPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDS 697
Query: 706 TYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ-- 762
F + +G E S N E + V KI+ + +KA V K IG+++PY Q
Sbjct: 698 PMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPKD---IGIITPYEGQRS 754
Query: 763 -VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVN 821
+V+ + G ++ + ++V S+D FQG E+D II+S VR N IGF+S P+R+N
Sbjct: 755 YIVSSMQATG-TFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLN 813
Query: 822 VALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
VALTRA++ L ILG+ + L S +W L+ K R NL ++ ++ S+
Sbjct: 814 VALTRAKYGLVILGNPKVL-SKHPLWNCLLQHFKERHTLVEGPLS-NLQESLIQFSR 868
Score = 136 (52.9 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ + K Q +KF LN SQ+ A+ + L+R + LI GPPGTGKT T
Sbjct: 402 EVAAAPMKTQMPKKFSVPGLPELNGSQINAVKSVLQR-------PLSLIQGPPGTGKTVT 454
Query: 295 VSMLLLTLLRIKC-RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPI-CPLGDILL 352
+ ++ L ++ + L C P+NVA+ +L R+ + ++ + ++S + P+G + L
Sbjct: 455 SATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSL 514
Query: 353 FGNKDRLKVNPG-FEEIYLNYRIKKLRE 379
+++++N E I LN +L E
Sbjct: 515 H---EQVRLNDSNIELIKLNQLKSELGE 539
Score = 37 (18.1 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKELEK 507
E++ L L G L QD K+L +
Sbjct: 526 ELIKLNQLKSELGELSSQDEKRLKQLTR 553
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 383 (139.9 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 103/294 (35%), Positives = 154/294 (52%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G+ VL+GD CQL ++ K + AG +SLFERL +L
Sbjct: 653 VLIDESTQATEPECLIPLVL-GVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTL 711
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEF-----GTYS 708
L +QYRMHP++S FP+ FY + +G + E+Q TG +F
Sbjct: 712 GIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTI----IERQ-TTGIDFPWPVPNRPM 766
Query: 709 FINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ S N E + V K++ K+ V Q IGV++PY Q I
Sbjct: 767 FFYVQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQ---IGVITPYEGQRAYI 823
Query: 767 RKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ + ++V S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 824 VNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVAL 883
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
TRAR+ + ILG+ + L S + +W L+ K +C NL ++ ++ K
Sbjct: 884 TRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECLVEGPLN-NLKQSMVQFQK 935
Score = 118 (46.6 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 248 KFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-K 306
+FG LN SQV A+ + L++ + LI GPPGTGKT T + ++ + + +
Sbjct: 480 RFGVPGLPELNASQVNAVKSVLQK-------PISLIQGPPGTGKTVTSAAIVYHMAKQGQ 532
Query: 307 CRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ L C P+NVA+ +LA ++ LK+V+ K ++P+
Sbjct: 533 GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 574
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 431 (156.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 105/296 (35%), Positives = 169/296 (57%)
Query: 570 ASLFFSTASSSYK--LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ 627
+ + ST S S L ++ IK + ++IDEA Q E S IPL+ G +++GD Q
Sbjct: 1562 SDIICSTLSGSAHDVLATMGIK-FDTVIIDEACQCTELSSIIPLRYGG-KRCIMVGDPNQ 1619
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
LP V S + + +SLF R+ N S +LL++QYRMHPSIS FP+ +FY+ ++ DG
Sbjct: 1620 LPPTVLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGP 1678
Query: 688 NVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWV 745
+ + ++ + Y F +II GR++ S N+ E+ I+++ L++ +
Sbjct: 1679 GMDILN-KRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFD 1737
Query: 746 GSKQKVS-IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
IG++SPY Q+ +RK+ + ++ +IDGFQG E++II+IS VR
Sbjct: 1738 NKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVR 1797
Query: 805 CN-TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQC 859
+ T S+GF+ +R+NVALTRA+ +W+LG +R+L S+ +W L+ DAK R C
Sbjct: 1798 ADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK-LWRDLIEDAKDRSC 1852
Score = 76 (31.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
S LN SQ A++ + + G LI GPPGTGKTKT+ ++ L K +
Sbjct: 1332 SYKLNTSQAEAIVNSVSK------EGFSLIQGPPGTGKTKTILGIIGYFLSTK-NASSSN 1384
Query: 314 PTNVAITELASRVLKLVKE 332
V + + +S +L+K+
Sbjct: 1385 VIKVPLEKNSSNTEQLLKK 1403
Score = 47 (21.6 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 302 LLRIKCRTLACTPTNVAITELASRV 326
LL+ K + L C P+N A+ E+ R+
Sbjct: 1400 LLK-KQKILICAPSNAAVDEICLRL 1423
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 389 (142.0 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 102/290 (35%), Positives = 158/290 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E IPL L G VL+GD QL ++ +K + +AG +SLFERL L
Sbjct: 614 VLIDESTQSAEPECMIPLVL-GCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK-SYEKQYLTGTEFGTYSFINI 712
+ LN+QYRMHP +S FP+ FY + +G ++ + + + F +
Sbjct: 673 GLTPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSN 732
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRK 768
+G E S N E S V K++ + +KA V + IGVV+PY Q +V+ +
Sbjct: 733 LGNEEISASGTSYLNRTEASNVEKLVTRFFKAGV---KPGDIGVVTPYEGQRSYIVSTMQ 789
Query: 769 KIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
G ++ + V+V S+D FQG E+D I++S VR N IGF+S P+R+NVALTRA+
Sbjct: 790 NTG-TFKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAK 848
Query: 829 HCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
+ + I+G+ + L S +W L+ + R+C + NL + L+ SK
Sbjct: 849 YGVVIIGNPKVL-SKHELWHHLLIHFRDRKCLVDGPLT-NLQASLLQFSK 896
Score = 115 (45.5 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK 306
+KF LN SQ+ A+ A L + + LI GPPGTGKT T + ++ L ++
Sbjct: 442 KKFTAPGLPDLNGSQISAIKAVLS-------TPLSLIQGPPGTGKTVTSATIIYHLAKMN 494
Query: 307 -CRTLACTPTNVAITELASRV----LKLVKESYK 335
+ L C P+NVA+ +L RV LK+V+ + K
Sbjct: 495 GSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAK 528
Score = 39 (18.8 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKELEK 507
E+ L+ L G L QD K+L K
Sbjct: 554 ELAKLQQLKSELGELSSQDEKKFKQLTK 581
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 376 (137.4 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 639 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 697
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 698 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 754
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 755 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 811
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 812 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 871
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 872 ARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSK 921
Score = 112 (44.5 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 235 ELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT 294
E+ V K Q ++F LN SQV A+ L+R + LI GPPGTGKT T
Sbjct: 455 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVT 507
Query: 295 VSMLLLTLLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
+ ++ L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 508 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 562
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 423 (154.0 bits), Expect = 4.6e-36, Sum P(4) = 4.6e-36
Identities = 105/295 (35%), Positives = 169/295 (57%)
Query: 568 KRASLFFSTASSSYKLHS-VEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGD 624
K+A + +T S S H V LNF ++IDEAAQ E ++ IPL+ G +L+GD
Sbjct: 1348 KQADVVCATLSGSG--HDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRY-GAKKCILVGD 1404
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLT-SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
QLP V SK + + +SLF R+ + ++ LL+IQYRMHP IS FP+ +FY +++
Sbjct: 1405 PNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRL 1464
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKA 743
DG N+ K+ + ++ +F Y ++ G S N+ EV ++ ++ +L
Sbjct: 1465 EDGDNMAEKTQQVWHVN-PKFTQYRLFDVRGKERTSNTMSTYNLEEVEYLVNMVDELLNK 1523
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV 803
+ IGV++PY +Q+ +R+ +Y T+ ++++DGFQG E+DII S V
Sbjct: 1524 FPDVNFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCV 1583
Query: 804 RCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
+ + IGF+ +R+NVALTRAR L I+G+ TL ++ +WG+LV DA +R+
Sbjct: 1584 KSYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETL-KTDDLWGSLVDDALSRK 1637
Score = 82 (33.9 bits), Expect = 4.6e-36, Sum P(4) = 4.6e-36
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
+NE Q A++ C LD +G LI GPPGTGKTKT+ ++ LL
Sbjct: 1130 VNEPQAKAIM-CA--LD---NNGFTLIQGPPGTGKTKTIIGIISALL 1170
Score = 51 (23.0 bits), Expect = 4.6e-36, Sum P(4) = 4.6e-36
Identities = 28/139 (20%), Positives = 61/139 (43%)
Query: 306 KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGF 365
K + L C P+N A+ E+ +L+L + + P ++ GN + + V+
Sbjct: 1191 KQQILLCAPSNAAVDEV---LLRLKRGFLLENGEKYIP-----RVVRIGNPETINVS--V 1240
Query: 366 EEIYLNYRIKK----LRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVN 421
++ L Y+ +K + + L + + D DC+ + +E+L+++ D +
Sbjct: 1241 RDLSLEYQTEKQLLEVNQGAIDLGSLQE-LTRWRDTFYDCIQK----IEELEKQIDVARD 1295
Query: 422 QSEE-KECRKETEGSKGER 439
+E+ K KE + E+
Sbjct: 1296 VAEDTKSLGKELQNKINEK 1314
Score = 41 (19.5 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 563 EDFCFKR--ASLFFSTASSSYKLHSVEIKPLNFLVID 597
+++ KR S S+A SS K E+KP N L D
Sbjct: 813 QEYLTKRNFESKLKSSAVSSRKPTFNEVKPANLLAED 849
Score = 39 (18.8 bits), Expect = 4.6e-36, Sum P(4) = 4.6e-36
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 485 KSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISWAFVRKR 525
KSL N + + N+ +++E+L S S + +RK+
Sbjct: 1301 KSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKK 1341
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 373 (136.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 632 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 690
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 691 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 747
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 748 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 804
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 805 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 864
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 865 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 914
Score = 111 (44.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 455 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 507
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 508 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 555
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 373 (136.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 642 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 700
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 701 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 757
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 758 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 814
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 815 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 874
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 875 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 924
Score = 111 (44.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 465 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 517
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 518 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 565
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 373 (136.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 643 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 701
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 702 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 758
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 759 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 815
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 816 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 875
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 876 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 925
Score = 111 (44.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 466 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 518
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 519 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 566
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 373 (136.4 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 644 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 702
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 703 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 759
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 760 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 816
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 817 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 876
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 877 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 926
Score = 111 (44.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 467 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 519
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 520 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 567
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 373 (136.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 102/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 645 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 703
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 704 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQW---PQPDKPMFF 760
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI KL KA G+K IG+++PY Q + +
Sbjct: 761 YVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYLVQ 817
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 818 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 877
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 878 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 927
Score = 111 (44.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 468 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 520
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 521 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 568
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 424 (154.3 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 104/269 (38%), Positives = 155/269 (57%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDEAAQ E + IPL+ G + +L+GD QLP V S+ + G+ +SLF R+
Sbjct: 1577 VIIDEAAQCVELSALIPLKY-GASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQN 1635
Query: 654 NHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ K HLL+ QYRMHP ISL+P+ +FY + DG+++ +K ++ + G Y F ++
Sbjct: 1636 HPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADGSDM-AKLRQQPWHDNPLLGPYRFFDV 1694
Query: 713 IGGREDFIY-HSCRNIVEVSAVIKILQKLYKAWVGS-KQKVSIGVVSPYTAQVVAIRKKI 770
G +E S N E++ I+I K + S K IG+++PY AQ+ A+R+K
Sbjct: 1695 EGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQK- 1753
Query: 771 GFEYENKDGFT--VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRAR 828
F+ +G ++ + D FQG E +III S VR + G IGF++ +R+NV LTRAR
Sbjct: 1754 -FQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRAR 1812
Query: 829 HCLWILGSERTLISSESIWGALVCDAKAR 857
LWILG R L E W L+ D+KAR
Sbjct: 1813 SSLWILGDSRALRQGE-FWNKLIEDSKAR 1840
Score = 81 (33.6 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 25/74 (33%), Positives = 35/74 (47%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT--- 313
LN Q A++ + G L+ GPPGTGKTKT+ ++ LL K T
Sbjct: 1327 LNRGQAAAII------NAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIK 1380
Query: 314 PTNVAITELASRVL 327
P N A +A ++L
Sbjct: 1381 PANGADEPMAQKLL 1394
Score = 61 (26.5 bits), Expect = 6.4e-34, Sum P(3) = 6.4e-34
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 308 RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE 367
+ L C P+N A+ EL VL+L K K D+ NT ++L G D +N +
Sbjct: 1392 KLLVCAPSNAAVDEL---VLRL-KAGIK-DTNGNTHKI---NVLRLGRSDA--INAAVRD 1441
Query: 368 IYLNYRIKKLRECFAPLSG 386
+ L+ +K+ + ++G
Sbjct: 1442 VTLDELVKEKMDAALNVNG 1460
Score = 43 (20.2 bits), Expect = 6.4e-34, Sum P(3) = 6.4e-34
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDC 274
++ GP SSTL + + A++A L C
Sbjct: 158 KEHGPMKSSTLTKKEPTAVVALYEALCC 185
Score = 40 (19.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 220 ITQVLGTDSVVDERCELCSVQRK 242
+ + LGTDS DE + S +K
Sbjct: 884 LLRALGTDSSDDEEVQFVSEAQK 906
Score = 37 (18.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 398 LEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVS 456
LE H++ KL E ++ + E+ E + + ++K ++ +R A +
Sbjct: 17 LEKFPEDMHLFCPKLSEDDEVDYEDPNEEVWDGEVQITAEQKKERIEDSDKRLHIATTA 75
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 413 (150.4 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 114/365 (31%), Positives = 189/365 (51%)
Query: 504 ELEK-LFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVL 562
EL K L + S++E K + ++++RSE L N ++ +
Sbjct: 1448 ELRKRLATESLEEKEITELEEK--IRAINKKRSELAKKLDEQREKASIANRTKEINRRNI 1505
Query: 563 EDFCFKRASLFFSTAS-SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVL 621
+ A + ST S S++ L + + ++IDEA Q E + IPL+ G ++
Sbjct: 1506 QARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRY-GCKKCIM 1564
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLNH--SKHLLNIQYRMHPSISLFPNLQFY 679
+GD QLP V S+ + + +SLF R+ NH S ++L++QYRMHP IS FP+ +FY
Sbjct: 1565 VGDPNQLPPTVLSQAAASYNYEQSLFVRMQK-NHPDSVYMLDVQYRMHPMISKFPSSEFY 1623
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQ 738
+++ DG + + + + Y F +I+G E + + S N E +++
Sbjct: 1624 NSKLKDGDGMLELN-TRPWHKDPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVALQLTD 1682
Query: 739 KLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDII 798
KL + K IG++SPY Q+ I++ +Y + ++DGFQG E++II
Sbjct: 1683 KLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQEKEII 1742
Query: 799 IISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQ 858
I+S VR + G++GF+S +R+NVALTRA+ LWILG++ +L +E +W L+ DA R
Sbjct: 1743 IMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNE-VWKKLLTDAGERN 1801
Query: 859 CFFNA 863
C A
Sbjct: 1802 CITQA 1806
Score = 75 (31.5 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV 295
+N+SQ A++ + G LI GPPGTGKTKT+
Sbjct: 1297 VNDSQARAIMGTFKS------EGFSLIQGPPGTGKTKTI 1329
Score = 57 (25.1 bits), Expect = 1.1e-35, Sum P(3) = 1.1e-35
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 306 KCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGF 365
K + L C P+N A+ EL VL+L ++ + S + P+ ++ G D +N
Sbjct: 1360 KAKILICAPSNAAVDEL---VLRL-RDGVRNSSGEHMPL----KVVRLGRSDA--INSSV 1409
Query: 366 EEIYLNYRIKK 376
++ L + K
Sbjct: 1410 RDLTLEELVDK 1420
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 389 (142.0 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 108/301 (35%), Positives = 159/301 (52%)
Query: 560 LVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
LVL++ +L FS AS K+ + ++IDEAAQ E+ + IP+Q G
Sbjct: 558 LVLDEADIVATTLSFSGASLLTKMAG----GFDIVIIDEAAQAVETSTLIPIQ-HGCKKV 612
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFY 679
VL+GD QLPA + S ++ + + +SLF+RL N S H+L QYRMH I FP+ FY
Sbjct: 613 VLVGDPKQLPATIISPLAIKYKYDQSLFQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFY 671
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINII-------GGREDFIYHSCRNIVEVSA 732
++ +LDG N+ S++ Y + FG F ++ GG F H C+
Sbjct: 672 QDLLLDGPNIPSRA--THYHSNPFFGPLVFYDLSWSTETKPGGGSVFNEHECK------M 723
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQG 792
+ + Q K + IG++SPY QV+A+R+ ++N G + + ++DGFQG
Sbjct: 724 AMYLFQLFTKVYPDEDFASRIGIISPYRQQVLALREI----FKNYPG--ISIDTVDGFQG 777
Query: 793 GEEDIIIISTVRC--NTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
E +III S VR G IGF+S +R+NVALTR R L ILG+ + L S W L
Sbjct: 778 REREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLLILGNTKAL-SINKDWNEL 836
Query: 851 V 851
+
Sbjct: 837 I 837
Score = 91 (37.1 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
FSST N+SQ+ A+ + L G+ + LI GPPGTGKT + L+ LL
Sbjct: 331 FSSTYNDSQLNALTSALE----GN--AITLIQGPPGTGKTHVILGLISVLL 375
Score = 56 (24.8 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 306 KCRTLACTPTNVAITELASRVLK 328
K R L C P+N A+ E+ SR+++
Sbjct: 461 KRRILLCAPSNGAVDEIVSRLIR 483
Score = 40 (19.1 bits), Expect = 1.3e-35, Sum P(4) = 1.3e-35
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 995 KEELLQKAKSLAKNDSN 1011
K++ L+K K L ND+N
Sbjct: 916 KKKQLKKRKELNNNDNN 932
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 370 (135.3 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 101/292 (34%), Positives = 158/292 (54%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + +AG +SLFERL L
Sbjct: 613 ILIDESTQATEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL 671
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG---ANVKSKSYEKQYLTGTEFGTYSFI 710
L +QYRMHP++S FP+ FY + +G A+ K ++ Q+ + F
Sbjct: 672 GIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQW---PQPDKPMFF 728
Query: 711 NIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRK 768
+ G+E+ S N E + V KI +L KA G+K IG+++PY Q + +
Sbjct: 729 YVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKA--GAKPD-QIGIITPYEGQRSYLVQ 785
Query: 769 KIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVALTR
Sbjct: 786 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 845
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
AR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 846 ARYGVIIVGNPKAL-SKQPLWNHLLNYYKEQKVLVEGPLN-NLRESLMQFSK 895
Score = 111 (44.1 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K Q ++F LN SQV A+ L+R + LI GPPGTGKT T + ++
Sbjct: 436 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQR-------PLSLIQGPPGTGKTVTSATIVYH 488
Query: 302 LLRI-KCRTLACTPTNVAITELASRV----LKLVKESYKRDSRSNTPI 344
L R L C P+N+A+ +L ++ LK+V+ K ++P+
Sbjct: 489 LARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPV 536
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 372 (136.0 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 106/331 (32%), Positives = 162/331 (48%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDE+ Q E E IPL + G +L+GD QL P ++ K+ D AG +SLFERL S
Sbjct: 703 ILIDESTQASEPECLIPLMM-GAKQVILVGDHRQLGPVLLCKKVVD-AGLSQSLFERLIS 760
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L H L IQYRMHPS++ FP+ Y Q++ + + + ++ F N
Sbjct: 761 LGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFFNC 820
Query: 713 IGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G E S N E S KI+ K + +GS IG+++PY Q I +
Sbjct: 821 TGSEEISSSGTSFINTTEASICEKIVTKFLE--LGSLPG-QIGIITPYEGQRAYITSHMQ 877
Query: 772 FEYE-NKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ N + + +++V S+D FQG E+D II+S VR N IGF+ P+R+NVALTRAR
Sbjct: 878 KSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARF 937
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSKELVEIGAESLT 889
L ILG+ + L S + +W +L+ K + NL ++ + + K G L
Sbjct: 938 GLIILGNAKVL-SKDPLWNSLISHFKNKNVLVEGSLA-NLKQSPVILQKPKKLYGQGKLP 995
Query: 890 STSQGGXXXXXXXXXXXXXRSINLIHKVLNS 920
Q +N+++ + N+
Sbjct: 996 IPGQNSNSFNYDREHIDPNIGMNMVYGISNN 1026
Score = 120 (47.3 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-IKC--RTLACT 313
LNESQ+ A+ L + + LI GPPGTGKT S ++ L++ +K + L CT
Sbjct: 537 LNESQISAVNKVLT-------APLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCT 589
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPIC-PLGDILLFGNKDRLKVNP-GFEEIYLN 371
P+NVAI +L ++ ++ + + S+ + P+ + L +K K++ G E+
Sbjct: 590 PSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPVEHLTL--HKQVYKLDQMGDGELG-- 645
Query: 372 YRIKKLRECFAPLS 385
+++KL+E F LS
Sbjct: 646 -KLRKLKEAFGSLS 658
Score = 41 (19.5 bits), Expect = 4.3e-35, Sum P(3) = 4.3e-35
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 1715 NNGNHGNSVKYQVGTSKDVPSKRSASLPEDMDAQNMNDDTLAMDLDQLCKYVDKYS 1770
NN N+ N+ ++ + S+ S+S + N + +T+ + +Q YS
Sbjct: 1045 NNINNNNNQRFNTQDGRYSNSQTSSSSQTYYGSTNSSGNTINSNQNQFFNTPSSYS 1100
Score = 39 (18.8 bits), Expect = 6.9e-35, Sum P(3) = 6.9e-35
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 1713 YGNNGNHGNSVKYQVGTSKDVPSKRSAS 1740
YG+ + GN++ + PS SA+
Sbjct: 1075 YGSTNSSGNTINSNQNQFFNTPSSYSAN 1102
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 353 (129.3 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 97/306 (31%), Positives = 161/306 (52%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE+ Q E E +P+ L G +L+GD CQL +V K + AG +SLFERL L
Sbjct: 614 ILIDESMQSTEPECMVPVVL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 672
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINII 713
L +QYRMHP +S FP+ FY + +G + + + + F+ +
Sbjct: 673 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFL-VT 731
Query: 714 GGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
G+E+ S N E + V KI + KA + +Q IG+++PY Q + + +
Sbjct: 732 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQ---IGIITPYEGQRAYLVQYMQ 788
Query: 772 FE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
++ ++ +++ S+D FQG E+DIII+S VR N IGF++ P+R+NVALTRA+
Sbjct: 789 YQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKF 848
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK--ELVE---IG 884
+ I+G+ + L + + +W L+ K R+ NL ++ + K +LV IG
Sbjct: 849 GIIIVGNPKVL-AKQQLWNHLLNFYKDRKVLVEGSLN-NLKESLIHFQKPKKLVNSMNIG 906
Query: 885 AESLTS 890
A +++
Sbjct: 907 AHFMST 912
Score = 123 (48.4 bits), Expect = 9.5e-35, Sum P(2) = 9.5e-35
Identities = 58/202 (28%), Positives = 91/202 (45%)
Query: 154 WTFVS-VTTVPDD--ED---ENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
W+ + V VPD+ +D E K VK +N V D K F +T L I
Sbjct: 351 WSEIGHVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTV-DFIWKCTSFDRMTRALCKFAI 409
Query: 208 WNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLA 267
+ N+ + +++LG D E V +G + F LN SQV A+
Sbjct: 410 --DRNSVSNF-IYSRLLGHGRA-DSNDE---VLFRGPQPKLFSAPHLPDLNRSQVYAVKH 462
Query: 268 CLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPTNVAITELASRV 326
L+R + LI GPPGTGKT T + ++ L+++ T L C P+N A+ +L ++
Sbjct: 463 ALQR-------PLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKI 515
Query: 327 ----LKLVKESYKRDSRSNTPI 344
LK+V+ K ++P+
Sbjct: 516 HRTNLKVVRVCAKSREAIDSPV 537
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 358 (131.1 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 100/305 (32%), Positives = 164/305 (53%)
Query: 588 IKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLF 647
+ P + +++DEA Q E E+ IPL + N VL+GD QLP ++S + E G+G+SL
Sbjct: 2195 LDPFSCVIVDEAGQSCEVETLIPL-IHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLM 2253
Query: 648 ERL-------TSLNHSKHL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
RL N + L L +QYRMHP I LFP+ Y + + E
Sbjct: 2254 ARLQRHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTL----KTDKATEEN 2309
Query: 697 QYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ--KLYKAWVGSKQKVSIG 754
+ + F Y ++ G E+ S N EV V++I++ K + +G ++ IG
Sbjct: 2310 RCSSEWPFQPYLVFDVGDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRR---IG 2366
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGF 813
+++PY+AQ I++++ ++N +V ++D FQG E+D II++ VR N+ GSIGF
Sbjct: 2367 IITPYSAQKKKIQEELDRVFKNNS--PGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGF 2424
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKAR 873
++ QR+NV +TRAR L+ILG +TL+ ++ W L+ DA+ R + ++ K
Sbjct: 2425 LASLQRLNVTITRARFSLFILGRLKTLMENKD-WNKLIQDAQRRGAIIKTSD-KSYKKDA 2482
Query: 874 LEVSK 878
L++ K
Sbjct: 2483 LKILK 2487
Score = 100 (40.3 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 35/86 (40%), Positives = 44/86 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLR--------------IKC-RTLACTPTNVAITELASRV 326
LI GPPGTGK+KT+ LL +LR IK R L C P+N AI EL ++
Sbjct: 1984 LIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVCAPSNAAIDELMKKI 2043
Query: 327 LKLVKESYKRDSRSNTPICPLGDILL 352
+ KE K +R P+ GDI L
Sbjct: 2044 IIAFKE--KCQNRQE-PLGNCGDIKL 2066
Score = 49 (22.3 bits), Expect = 3.1e-31, Sum P(3) = 3.1e-31
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 49 VEKIPESFQSVKQYFGSFVFPLL 71
V +P FQ YF +F FPL+
Sbjct: 1754 VASVPIRFQGYNDYFNTF-FPLM 1775
Score = 48 (22.0 bits), Expect = 7.4e-26, Sum P(3) = 7.4e-26
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 171 KENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQVLGTDSVV 230
K+NR+ V A +N + + KK I N++ L CG+ K++ LG + +
Sbjct: 2022 KQNRFLVCAPSNAAIDELMKK--IIIAFKEKCQNRQ--EPLGNCGDIKLVR--LGAERSI 2075
Query: 231 DERCELCSVQRKGQWDEKFGPS 252
+ S+ ++ + K P+
Sbjct: 2076 NSEVRAFSLDKQVEHRMKRKPT 2097
Score = 48 (22.0 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 319 ITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEE--IYLNYRIKK 376
I ++ +V V+ S ++SN +C D GNK + ++ EE + +N K+
Sbjct: 998 ICDVKRKVKSAVRSS--NSAQSNQSLC---DTDSHGNKIIIILDSSDEENGVTVNEETKE 1052
Query: 377 LRE--C--FAPLSGWRHCFS-SMIDL--------LEDCVSQYHIYVEKLKEREDCNVNQS 423
L E C P+S +H + S ++ LEDC SQY + ++ Q
Sbjct: 1053 LNENMCPEKQPVSEMQHDVTGSTLESKMPNSPLPLEDCDSQYFEFETEIDVFSVWQDTQE 1112
Query: 424 EEKEC 428
+++C
Sbjct: 1113 YKQDC 1117
Score = 44 (20.5 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 36/175 (20%), Positives = 67/175 (38%)
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYR-- 373
N+ +T+L ++L + D+ NT + + + + L+ N + Y+
Sbjct: 1518 NLFLTQLDPVDMELCSQD--EDAEGNTIATTRTEEMEIDHAESLQQNDTLTVVKCKYKDC 1575
Query: 374 ---IKKLREC----FAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEK 426
+KK+ +C A S H F+ L S I+ R E
Sbjct: 1576 TEKVKKIGDCCSRHLATNSESDHLFAKPSSLPPRKPSTTKIFSSVSSSRNAAFSKDLENV 1635
Query: 427 ECRKETEGSKGE-RKPFLKYVRERFKCAVVSLRN-CIFIFCTHLPKSYISENSFQ 479
E + S+ KP + +R R + A+ + + C +++P+ YIS N Q
Sbjct: 1636 EKQPPALKSRASIAKPAV--LRPRSEKAIPTRKQTCRTPSSSNIPQPYISNNVLQ 1688
Score = 43 (20.2 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 410 EKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSLRN 459
+ +K++ C+ S EK+ K+T GE F V ER +S N
Sbjct: 1398 KSVKQKAKCSDQPSVEKQREKQT----GET--FYPSVNERGHVTSISAEN 1441
Score = 42 (19.8 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 267 ACLRRLDCGHRSGVELI 283
+C+R+ DCG GV +
Sbjct: 821 SCMRK-DCGKHQGVNTV 836
Score = 41 (19.5 bits), Expect = 2.1e-24, Sum P(3) = 2.1e-24
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 301 TLLRIKCRTLACTPTNVAITELASRVLKLVKES 333
TL +KC+ CT I + SR L ES
Sbjct: 1564 TLTVVKCKYKDCTEKVKKIGDCCSRHLATNSES 1596
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 344 (126.2 bits), Expect = 4.2e-31, Sum P(3) = 4.2e-31
Identities = 109/338 (32%), Positives = 167/338 (49%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
K V E A + T SS+ +I+ L IDE+ Q E E + + + G+
Sbjct: 573 KRVKEHELLAAADVICCTCSSAADARLSKIRTRTVL-IDESTQATEPEILVSI-MRGVRQ 630
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQF 678
VL+GD CQL +V K + AG +SLFERL L L +QYRMHP +S FP+ F
Sbjct: 631 LVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVF 690
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEF-----GTYSFINIIGGREDFIYH--SCRNIVEVS 731
Y + +G + ++TG ++ +F G E+ S N E +
Sbjct: 691 YDGSLQNGVTENDR-----HMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAA 745
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYENKDGFTVKVKSID 788
V K++ KL KA V Q IGV++ Y Q +V G +K V++ S+D
Sbjct: 746 NVEKLVSKLIKAGVQPHQ---IGVITSYEGQRSFIVNYMHTQG-TLNSKLYENVEIASVD 801
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
FQG E+D II++ VR N IGF+S P+R+NVA+TRA++ L ++G+ + L + +W
Sbjct: 802 AFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVL-ARHDLWH 860
Query: 849 ALVCDAKARQCFF----NADEERNLA--KARLEVSKEL 880
L+ K+++ + NA + NLA KA + +
Sbjct: 861 ELINHYKSKEMLYEGPINALKPLNLALPKATIRTKNNI 898
Score = 104 (41.7 bits), Expect = 4.2e-31, Sum P(3) = 4.2e-31
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACTPT 315
LN SQ+ A+ L R + LI GPPGTGKT + ++ L+ + + L C+P+
Sbjct: 446 LNSSQMQAVKQVLTR-------PLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPS 498
Query: 316 NVAITELASRV----LKLVKESYKRDSRSNTPI 344
N+A+ LA ++ LK+V+ + S T +
Sbjct: 499 NIAVDHLAEKIHKTGLKVVRLCARSREHSETTV 531
Score = 43 (20.2 bits), Expect = 4.2e-31, Sum P(3) = 4.2e-31
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSV 513
E+ L L D G L F+D++ +L+++ H +
Sbjct: 547 ELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHEL 580
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 361 (132.1 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 117/356 (32%), Positives = 186/356 (52%)
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNLPCTT-SKLVLEDFCFKRASLFFSTASSSYKLH 584
YLLQ Q++ + L ++ N +L+ P T + + C RA++ +T SS KL
Sbjct: 1326 YLLQQLQQKEKKLQLISN------QLSPPLTQREEFEISHMCVTRANIICTTLSSCVKLA 1379
Query: 585 SVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
+ + + ++DEA Q E + +P++ G+ H VL+GD QLPA+V SK + + G
Sbjct: 1380 NY-VDFFDICIVDEATQCTEPWTLLPMRF-GLTHMVLVGDMQQLPAVVLSKKAIDFGLSN 1437
Query: 645 SLFERL-----TSLNH--SKHL-------LNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S+F+R+ T L+ S HL L+ QYRMHP I +PN FY +Q+++ A
Sbjct: 1438 SMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLIN-AECT 1496
Query: 691 SKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQK 750
++ + + + G + S N E V K+L ++ K + SK +
Sbjct: 1497 AR-FASPLIPYCVINLKYTCDSNGAQNK----SISNNEEARFVAKLLTEMDKH-MPSK-R 1549
Query: 751 VSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS 810
S G++SPY Q A+ + I + N + +++D +QG E+D+IIIS R T G
Sbjct: 1550 FSYGLISPYQNQCYALSQVIP-SHMN-----ITPQTVDSYQGLEKDVIIISNAR--TRGC 1601
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEE 866
GF++ QR+NVALTR R CL I G+ L S E +W L+ DA+ R+ +FN D +
Sbjct: 1602 -GFLTNYQRLNVALTRPRRCLVICGNFEDLKSVE-MWRNLLDDARKRKVYFNLDRD 1655
Score = 88 (36.0 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL-TLLRIKCRTL----- 310
LNE Q +L +R+ + + LI GPPGTGK++ +S L L TL +TL
Sbjct: 1172 LNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKIL 1231
Query: 311 ACTPTNVAITELASRVLKLVKESYKRD 337
C +N A+ + +L V RD
Sbjct: 1232 ICAHSNTAVDHIVG-LLGSVLRVMNRD 1257
Score = 45 (20.9 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 46 KDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLE 83
+D + IP F S K Y FV PL+ +++L S +E
Sbjct: 993 QDVLMPIPPEFDSFKNYREIFV-PLM---KLELLSTIE 1026
Score = 43 (20.2 bits), Expect = 6.4e-26, Sum P(3) = 6.4e-26
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 368 IYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEKLK 413
+Y Y L+E FA L + ++ DL + + Q I EKLK
Sbjct: 1067 LYTLYCCGMLKETFANLLELKFVSGNVFDLTFEILKQ-DISEEKLK 1111
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 314 (115.6 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 97/320 (30%), Positives = 167/320 (52%)
Query: 559 KLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINH 618
+L + D K A + +T + + ++ + + ++IDE AQ E I L L G +
Sbjct: 333 QLAVSDV-IKNADVILTTLTGALT-RKLDNRTFDLVIIDEGAQALEVACWIAL-LKG-SR 388
Query: 619 AVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL--NHSKHLLNIQYRMHPSISLFPNL 676
+L GD QLP ++S ++ G GR+LFERL L + K +L +QYRMH I + +
Sbjct: 389 CILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSK 448
Query: 677 QFYRNQILDGANVKSKS-YEKQYLT---GTEFGTYSFINIIG----GREDFIYHSCRNIV 728
+ Y N+I ++V S ++ + +T TE T ++ G ++D S N
Sbjct: 449 ELYDNKITAHSSVASHMLFDLENVTKSSSTE-ATLLLVDTAGCDMEEKKDE-EESTYNEG 506
Query: 729 EVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSID 788
E + ++L ++ V Q IG+++PY AQV+ +R G E + KD +++ ++D
Sbjct: 507 EAEVAMAHAKRLMESGV---QPSDIGIITPYAAQVMLLRILRGKEEKLKD---MEISTVD 560
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
GFQG E++ IIIS VR N+ +GF+ +R+NVA+TR+R I+ T +SS++
Sbjct: 561 GFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRRQCCIVCDTET-VSSDAFLK 619
Query: 849 ALVCDAKARQCFFNADEERN 868
++ + + +A E N
Sbjct: 620 RMIEYFEEHGEYLSASEYTN 639
Score = 112 (44.5 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 238 SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSM 297
SV +K + F P F+ L++SQ A+ L D V L+ GPPGTGKT TV
Sbjct: 174 SVSKKDV--KSFTP-FNKNLDQSQKDAITKALSSKD------VFLLHGPPGTGKTTTVVE 224
Query: 298 LLLTLLRIKCRTLACTPTNVAITELASRVL 327
++L ++ + LAC +N+A+ + R++
Sbjct: 225 IVLQEVKRGSKILACAASNIAVDNIVERLV 254
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 335 (123.0 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 103/313 (32%), Positives = 163/313 (52%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSL--- 646
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+
Sbjct: 2164 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMAR 2222
Query: 647 FERLT--SLNHSK--HL----LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
F +L S+ H+ L L IQYRMHP I LFP+ Y DG ++ E
Sbjct: 2223 FHKLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIY-----DGILRTNRGTETSR 2277
Query: 699 LTGT-EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVS 757
+ F Y ++ G E S N+ E+ V++++ KL K +IG+++
Sbjct: 2278 CSSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELI-KLIKDKRRDVTFRNIGIIT 2336
Query: 758 PYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-TGGSIGFISK 816
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N T GSIGF++
Sbjct: 2337 HYKAQKTMIQKDLDKEFDRKGA--AEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLAS 2394
Query: 817 PQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEV 876
QR+NV +TRA++ L+ILG RTL+ + W L+ DA+ R + +N +++
Sbjct: 2395 LQRLNVTITRAKYSLFILGHLRTLVENRH-WYHLIQDAQKRGAIIKTCD-KNYRHDAMKI 2452
Query: 877 SKELVEIGAESLT 889
K L + SLT
Sbjct: 2453 LK-LKPLLQRSLT 2464
Score = 103 (41.3 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 252 SFSSTLNESQVGAM-LACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL------- 303
++ NE Q A+ AC + + LI GPPGTGK+KT+ +L LL
Sbjct: 1919 AYLKDFNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRG 1978
Query: 304 --------RIKC-RTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILL 352
+IK R L C P+N A+ EL +++ KE K D ++ P+ GDI L
Sbjct: 1979 YSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCK-DKKN--PMGNCGDINL 2033
Score = 42 (19.8 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +K+ N + CG+ ++
Sbjct: 1981 DENSNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKK--NPMGNCGDINLVR- 2035
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2036 -LGPEKSIN 2043
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 338 (124.0 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 95/282 (33%), Positives = 150/282 (53%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + + G+ +S+ R
Sbjct: 2168 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMAR 2226
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y N+K+ S +
Sbjct: 2227 FYKLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNR------NLKTNSLTEAS 2280
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
++ F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2281 RCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGII 2339
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFIS 815
+ Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR T GSIGF++
Sbjct: 2340 THYKAQKTLIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLA 2397
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL ++ W L+ DA+ R
Sbjct: 2398 SLQRLNVTITRAKYSLFILGHLRTLRENDH-WNQLIEDAQKR 2438
Score = 105 (42.0 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 35/87 (40%), Positives = 45/87 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIKC-RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1954 LIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2013
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D R+ P+ GDI L
Sbjct: 2014 IILEFKEKCK-DKRN--PLGNCGDINL 2037
Score = 47 (21.6 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 20/69 (28%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +KR N L CG+ ++
Sbjct: 1985 DENSNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKR--NPLGNCGDINLVR- 2039
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2040 -LGPEKSIN 2047
Score = 44 (20.5 bits), Expect = 5.0e-29, Sum P(3) = 5.0e-29
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 51 KIPESFQSVKQYFGSFVFPLL 71
++P FQ YF F FPL+
Sbjct: 1727 RVPVRFQDCGDYFSVF-FPLM 1746
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 343 (125.8 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 92/280 (32%), Positives = 148/280 (52%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2197 PFSCVIVDEAGQSCEVETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2255
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L ++ +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2256 FYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSSDW 2315
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F Y ++ G E S N+ E+ V++I+ KL K +IG+++
Sbjct: 2316 ----PFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEII-KLIKDKRRDVTFRNIGIITH 2370
Query: 759 YTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKP 817
Y AQ I+K + E++ K +V ++DGFQG ++D +I++ VR N GSIGF++
Sbjct: 2371 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASL 2428
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2429 QRLNVTITRAKYSLFILGHLRTLMENQH-WNHLIQDAQKR 2467
Score = 102 (41.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIKC-RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1983 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2042
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 2043 IILEFKEKCK-DKKN--PLGNCGDINL 2066
Score = 44 (20.5 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +K+ N L CG+ ++
Sbjct: 2014 DENSNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKK--NPLGNCGDINLVR- 2068
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2069 -LGPEKSIN 2076
Score = 38 (18.4 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 144 VSDLRRVGRT-WTFVSVTTVPDDEDENKKE 172
++D G W V + + DD+D++ +E
Sbjct: 1009 LADQNNTGEACWGQVIIISDSDDDDDDDEE 1038
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 328 (120.5 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 94/271 (34%), Positives = 141/271 (52%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
++IDEA Q E E IPL L G VL+GD QL P ++ K++ A +SLFERL
Sbjct: 561 VLIDEATQASEPECMIPLVL-GAKQVVLVGDHQQLGPVVMNKKVA-LASLSQSLFERLII 618
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
L +S L +QYRMHP +S FP+ FY + +G + + +
Sbjct: 619 LGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFYA 678
Query: 713 IGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIR 767
G+E+ S N E S KI+ ++ V +Q IG+V+PY Q +V
Sbjct: 679 NFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQ---IGIVTPYDGQRSYIVQYM 735
Query: 768 KKIGFEYENKDGF-TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTR 826
+ G KD + V+V S+D FQG E+D II+S VR + IGF++ P+R+NVALTR
Sbjct: 736 QNNGSM--QKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTR 793
Query: 827 ARHCLWILGSERTLISSESIWGALVCDAKAR 857
A++ + +LG+ + L + ++W V K +
Sbjct: 794 AKYGVIVLGNPKVL-AKHALWYHFVLHCKEK 823
Score = 95 (38.5 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCR-------T 309
LN SQ A+ A L + + LI GPPGTGKT T + ++ L ++ R
Sbjct: 393 LNASQSEAVRAVLSK-------PLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPV 445
Query: 310 LACTPTNVAITELASRV 326
L C P+NVA+ +LA ++
Sbjct: 446 LVCAPSNVAVDQLAEKI 462
Score = 41 (19.5 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 272 LDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
++C H V+ +W + +T L T
Sbjct: 325 IECTHNFSVDYVWKSTSFDRMQTALRLFAT 354
Score = 39 (18.8 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 46 KDQVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSG------LEAMRRAPYAQVIAFEEL 99
KD V + ++ K+Y F+ P LE ++L G E RAP++ ++
Sbjct: 248 KDVVVRWDQAIN--KRYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRAPWSSTGYVIKI 305
Query: 100 KPYGTNQYGIEV 111
+++ G+E+
Sbjct: 306 PNNVSDEVGLEL 317
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 334 (122.6 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 101/314 (32%), Positives = 161/314 (51%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2150 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2208
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2209 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTESI 2262
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2263 RCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2321
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2322 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2379
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLE 875
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R + N ++
Sbjct: 2380 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKRGAIIKTSDP-NYRHDAMK 2437
Query: 876 VSKELVEIGAESLT 889
+ K L + SLT
Sbjct: 2438 ILK-LKPVLQRSLT 2450
Score = 102 (41.0 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIKC-RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 1996 IILEFKEKCK-DKKN--PLGNCGDINL 2019
Score = 41 (19.5 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +K+ N L CG+ ++
Sbjct: 1967 DENFNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKK--NPLGNCGDINLVR- 2021
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2022 -LGPEKSIN 2029
Score = 41 (19.5 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 30/120 (25%), Positives = 49/120 (40%)
Query: 399 EDCVSQYHIYVEK-LKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVVSL 457
E+ + Q + K E VN S EK+ KE E R P +++ E + V
Sbjct: 1019 EENIKQSKACIGKDCSEHRSLAVNASVEKQLVKEEE-----RYP-VEF--EDSESQVFEF 1070
Query: 458 RNCIFIFCTHLPKSYISENSFQ--EMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDE 515
+ +F S+NS Q + + + DS N L + VS+E+ + + V E
Sbjct: 1071 ESSSEVFSVWQDHKIDSKNSLQGEQKSYVTHVADSTNNNLGCGDSVSEEVVRNKAEGVKE 1130
Score = 40 (19.1 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 52 IPESFQSVKQYFGSFVFPLL 71
+P FQ +YF F+ PL+
Sbjct: 1714 VPVRFQDCAEYFNVFL-PLI 1732
Score = 40 (19.1 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 525 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLV 561
R +L QR EC+ LR+ ++ ++ P +KL+
Sbjct: 1282 RKAFELSQRSLECIVQLRDHGKTVGVVDAP-KKAKLI 1317
Score = 39 (18.8 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 398 LEDCVSQYHIYVEKLKEREDCNVNQSEEKEC 428
++DC Y YV K + +V +S + EC
Sbjct: 1806 MQDCSHYYCGYVHKFRRT---SVMRSGKAEC 1833
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 334 (122.6 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 96/282 (34%), Positives = 150/282 (53%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 2151 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 2209
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 2210 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 2263
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 2264 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 2322
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFIS 815
+ Y AQ I+K + E++ K +V ++D FQG ++D II++ VR + GSIGF++
Sbjct: 2323 THYKAQKTMIQKDLEKEFDKKG--PAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLA 2380
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKAR 857
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R
Sbjct: 2381 SLQRLNVTITRAKYSLFILGHLRTLMENQH-WYELIQDAQKR 2421
Score = 102 (41.0 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIKC-RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 1997 IILEFKEKCK-DKKN--PLGNCGDINL 2020
Score = 41 (19.5 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 525 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLV 561
R +L QR EC+ LR+ ++ + P T KL+
Sbjct: 1283 RKAFELSQRSLECIVQLRDHGKTVGVVEAPKKT-KLI 1318
Score = 41 (19.5 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 398 LEDCVSQYHIYVEK-LKEREDCNVNQSEEKECRKETE 433
+E + Q + E E+ D VN S EK+ KE E
Sbjct: 1016 IEGNIEQSKVSRENDCSEQHDLVVNTSVEKKLVKEEE 1052
Score = 41 (19.5 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +K+ N L CG+ ++
Sbjct: 1968 DENFNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKK--NPLGNCGDINLVR- 2022
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2023 -LGPEKSIN 2030
Score = 40 (19.1 bits), Expect = 6.8e-28, Sum P(3) = 6.8e-28
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 52 IPESFQSVKQYFGSFVFPLL 71
+P FQ +YF F+ PL+
Sbjct: 1715 VPVRFQDCAEYFNVFL-PLI 1733
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 337 (123.7 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 97/312 (31%), Positives = 159/312 (50%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N +L+GD QLP V S + E G+ +S+ R
Sbjct: 2174 PFSCVIVDEAGQSCEIETLTPL-IHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMAR 2232
Query: 650 LTSL--NHSKH---------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L + +H L +QYRMHP I LFP+ Y + ++ +
Sbjct: 2233 FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW 2292
Query: 699 LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
F Y ++ G E S N+ E+ V++I+ KL K +IG+++
Sbjct: 2293 ----PFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITH 2347
Query: 759 YTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKP 817
Y AQ I+K + E++ K +V ++D FQG ++D +I++ VR N+ GSIGF++
Sbjct: 2348 YKAQKTMIQKDLDKEFDRKG--PAEVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASL 2405
Query: 818 QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVS 877
QR+NV +TRA++ L+ILG RTL+ ++ W L+ DA+ R + +N +++
Sbjct: 2406 QRLNVTITRAKYSLFILGHLRTLMENQH-WNQLIQDAQKRGAIIKTCD-KNYRHDAVKIL 2463
Query: 878 KELVEIGAESLT 889
K L + SLT
Sbjct: 2464 K-LKPVLQRSLT 2474
Score = 102 (41.0 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLL---------------RIKC-RTLACTPTNVAITELASR 325
LI GPPGTGK+KT+ LL LL +IK R L C P+N A+ EL +
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 326 VLKLVKESYKRDSRSNTPICPLGDILL 352
++ KE K D ++ P+ GDI L
Sbjct: 2020 IILEFKEKCK-DKKN--PLGNCGDINL 2043
Score = 44 (20.5 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 165 DEDENKK--ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRIWNSLHMCGNWKVITQ 222
DE+ N K +NR V A +N V + KK + +K+ N L CG+ ++
Sbjct: 1991 DENSNAKIKQNRVLVCAPSNAAVDELMKK--IILEFKEKCKDKK--NPLGNCGDINLVR- 2045
Query: 223 VLGTDSVVD 231
LG + ++
Sbjct: 2046 -LGPEKSIN 2053
Score = 43 (20.2 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 158 SVTTVPDDEDENKKENRYKVK 178
SV T P D +N + + KVK
Sbjct: 972 SVITFPSDSPQNSSQLQRKVK 992
Score = 40 (19.1 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1672 VPSKRPASLPEDTDAQNKNDNTMVMNLDQLCKALEA 1707
V + PA+ PE + Q+K D+ ++LC EA
Sbjct: 2604 VRGEPPAASPEASTCQSKCDDPE----EELCHRREA 2635
Score = 39 (18.8 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 332 ESYKRDSRSNTPICP 346
E K+DS T ICP
Sbjct: 362 EKTKKDSGWRTAICP 376
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 288 (106.4 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 92/318 (28%), Positives = 160/318 (50%)
Query: 542 RNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQ 601
R + +S+ EL + + L +++ ST + + I +++VIDE AQ
Sbjct: 369 RVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDECAQ 428
Query: 602 LKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL--NHSKHL 659
E+ IP+Q N +L GD QLP + S + + G +LFER+ + L
Sbjct: 429 ALEASCWIPIQKG--NKLLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSRL 486
Query: 660 LNIQYRMHPSISLFPNLQFYRNQILDGANVKSK---SYEKQYLTGTEFGTYSFINI-IGG 715
LN+QYRM+ I + +++FY ++++ +V + + + + T T + I G
Sbjct: 487 LNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSG 546
Query: 716 -----REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
+D S N EV V + ++KL + G K IGV++PY QV ++ +
Sbjct: 547 CDMEESQDDEGESKFNNGEVIVVKRHIEKLIEC--GVKPN-DIGVITPYNGQVKLLKSYL 603
Query: 771 GFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG--SIGFISKPQRVNVALTRAR 828
+Y + +++ ++DGFQG E+D+IIIS VR NT +GF+++ +R NVA+TRAR
Sbjct: 604 SKKYSS-----MEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAITRAR 658
Query: 829 HCLWILGSERTLISSESI 846
+ ++ T+ S E +
Sbjct: 659 KHVVVVCDTDTISSHEPL 676
Score = 115 (45.5 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 247 EKFGPSF-SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI 305
EKF + LN+SQ A+L L D V I GPPGTGKT TV ++ L++
Sbjct: 224 EKFEQQLINKGLNQSQKEAILFSLSSND------VACIHGPPGTGKTTTVVEFIVQLIKS 277
Query: 306 KCRTLACTPTNVAITELASRVLKLVKES 333
+ LAC P+N+++ + ++L+ S
Sbjct: 278 GKKVLACGPSNLSVDNMLEKLLEYSNSS 305
Score = 44 (20.5 bits), Expect = 5.3e-19, Sum P(3) = 5.3e-19
Identities = 23/104 (22%), Positives = 40/104 (38%)
Query: 277 RSGVELI-WGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAI-TELASRVLKLVKESY 334
+SG +++ GP + LL C T + T + ++LK +
Sbjct: 276 KSGKKVLACGPSNLSVDNMLEKLLEYSNSSSCNGFLINATRIGHPTRILPQLLKHTLDHK 335
Query: 335 KRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLR 378
++S I + D + +K LKV E + IK+LR
Sbjct: 336 TKNSEGGQIIKGIKDEIKSLSKQLLKVKQHSERRVIQSSIKELR 379
Score = 43 (20.2 bits), Expect = 2.6e-26, Sum P(3) = 2.6e-26
Identities = 22/90 (24%), Positives = 40/90 (44%)
Query: 1619 LPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNYRRSVKYQVGTSKDVPSKRPA 1678
LP DTD +++ N N + N NN + ++S ++ KD +K+
Sbjct: 701 LPSDTDNWDISLNKDDNNNNSTTTTTTT---TTNTNNDSNKKS---KIEMLKDKKNKK-- 752
Query: 1679 SLPEDTDAQNKNDNTMVMNLDQLCKALEAL 1708
S+ E +NK+D ++L LE++
Sbjct: 753 SIEEKEKKKNKDDLEKQEEKEKLRLQLESI 782
Score = 38 (18.4 bits), Expect = 8.5e-26, Sum P(3) = 8.5e-26
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 1609 KDVPSKRPASLPEDTDAQNMNDNTLV--MNLDQLCKVFEALKM 1649
K +K+P + T V + D+L K FEA+++
Sbjct: 886 KKKKAKKPTTTTTTTSTTTTTKKKSVDKKSADELLKEFEAIEL 928
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 200 (75.5 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 61/201 (30%), Positives = 100/201 (49%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL 628
++ + F+T ++ IK +++DEA Q E+ + +PL L GI + V +GDE QL
Sbjct: 792 QSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQL 851
Query: 629 PAMVESKISDEAGFGRSLFERLTSLNHSKH--LLNIQYRMHPSISLFPNLQFYRNQILDG 686
S S+ SLFER+ S K+ +L+ QYRMHP IS FP + Y ++ DG
Sbjct: 852 -----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDG 906
Query: 687 ANVKSKSY----EKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYK 742
+ K++ + + G S + + D + + N E ++KI+Q L
Sbjct: 907 VTDEQKAWPGVQHPLFFYQCDLGPESRVR--STQRDIVGFTYENKHECVEIVKIIQILM- 963
Query: 743 AWVGSKQKVS-IGVVSPYTAQ 762
+ K + IGV++PY+AQ
Sbjct: 964 --LDKKVPLEEIGVITPYSAQ 982
Score = 150 (57.9 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISS 843
V ++D FQG E+ II S VR NT IGF+ +R+NVALTRA+H L ++G++ L
Sbjct: 1038 VATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKG 1097
Query: 844 ESIWGALVCDAKARQCFF 861
+ +W + + ++ F
Sbjct: 1098 DPLWKDYITYLEEQEVIF 1115
Score = 97 (39.2 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 253 FSST-LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTL 310
FSS LN SQ A+ L + + ++ GPPGTGKT T+ +++ ++ R +
Sbjct: 644 FSSDKLNRSQKTAVEHVLN-------NSITILQGPPGTGKTSTIEEIIIQVIERFHAFPI 696
Query: 311 ACTP-TNVAITELASRVL------KLVKESYKRDSRSNTPICPLGDILL 352
C +N+AI +A +++ K+++ K+ + + PLG+I L
Sbjct: 697 LCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICL 745
Score = 40 (19.1 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 742 KAWVGSKQKVSIGV--VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSI 787
KAW G + + + P + R +GF YENK VK I
Sbjct: 912 KAWPGVQHPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKII 959
Score = 38 (18.4 bits), Expect = 7.4e-20, Sum P(3) = 7.4e-20
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 537 CLSVLRNLWNS-LDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
C + +W + EL++ L++E F + SL SS +KL
Sbjct: 554 CTQDEQKVWYIFIKELSIQRGKYVLLVELFSWNNLSLPTKNGSSQFKL 601
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 279 (103.3 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 109/366 (29%), Positives = 168/366 (45%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELN--LPC 555
D V+++ + + I AFV R Q RR + ++WN + L L
Sbjct: 280 DAVLARSDNAQIVADIRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKE 331
Query: 556 TTSKLVLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+LE L +T ASS L + + +VIDE AQ E+ IPL A
Sbjct: 332 REEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA 391
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISL 672
+L GD QLP S + AG SL ERL + ++ L +QYRMH +I
Sbjct: 392 --RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMR 449
Query: 673 FPNLQFYRNQILDGANVKSKSY-EKQYLTGTE-FGT-YSFINIIG-GR---EDFIYHSCR 725
+ + Y Q+ +V + + TE G ++ G G ED S
Sbjct: 450 WASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKG 509
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N EV V +Q L A V Q I V++PY QV +R+ + + +++K
Sbjct: 510 NPGEVRLVSLHIQALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIK 561
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
S+DGFQG E++ +++S VR N G +GF+++ +R+NVA+TRAR + ++ RT +S+ +
Sbjct: 562 SVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHA 620
Query: 846 IWGALV 851
LV
Sbjct: 621 FLKTLV 626
Score = 112 (44.5 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 251 PSFSST-LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT 309
P F +T L+ SQ A+ L + + + +I GPPGTGKT TV ++L +R +
Sbjct: 184 PLFCNTSLDASQKEAVSFALSQKE------LAIIHGPPGTGKTTTVVEIILQAVRQGLKV 237
Query: 310 LACTPTNVAITELASRVLK 328
L C P+N+A+ L R+ +
Sbjct: 238 LCCAPSNIAVDNLVERLAR 256
Score = 39 (18.8 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
GV L+ + +T LL+TL +C + A P+N
Sbjct: 44 GVCLLKLQVSSQRTGLYGRLLVTLEPRRCTSAAVLPSN 81
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 279 (103.3 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
Identities = 109/366 (29%), Positives = 168/366 (45%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELN--LPC 555
D V+++ + + I AFV R Q RR + ++WN + L L
Sbjct: 280 DAVLARSDNAQIVADIRKDIDQAFVNNR---QTQDRREKS-----SVWNEVKLLRKELKE 331
Query: 556 TTSKLVLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA 614
+LE L +T ASS L + + +VIDE AQ E+ IPL A
Sbjct: 332 REEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIPLLKA 391
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISL 672
+L GD QLP S + AG SL ERL + ++ L +QYRMH +I
Sbjct: 392 --RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMR 449
Query: 673 FPNLQFYRNQILDGANVKSKSY-EKQYLTGTE-FGT-YSFINIIG-GR---EDFIYHSCR 725
+ + Y Q+ +V + + TE G ++ G G ED S
Sbjct: 450 WASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKG 509
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N EV V +Q L A V Q I V++PY QV +R+ + + +++K
Sbjct: 510 NPGEVRLVSLHIQALVDAGV---QASDIAVITPYNLQVDLLRQSLAHRHPE-----LEIK 561
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
S+DGFQG E++ +++S VR N G +GF+++ +R+NVA+TRAR + ++ RT +S+ +
Sbjct: 562 SVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHA 620
Query: 846 IWGALV 851
LV
Sbjct: 621 FLKTLV 626
Score = 112 (44.5 bits), Expect = 7.2e-26, Sum P(2) = 7.2e-26
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 251 PSFSST-LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT 309
P F +T L+ SQ A+ L + + + +I GPPGTGKT TV ++L +R +
Sbjct: 184 PLFCNTSLDASQKEAVSFALSQKE------LAIIHGPPGTGKTTTVVEIILQAVRQGLKV 237
Query: 310 LACTPTNVAITELASRVLK 328
L C P+N+A+ L R+ +
Sbjct: 238 LCCAPSNIAVDNLVERLAR 256
Score = 39 (18.8 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 279 GVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
GV L+ + +T LL+TL +C + A P+N
Sbjct: 44 GVCLLKLQVSSQRTGLYGRLLVTLEPRRCTSAAVLPSN 81
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 335 (123.0 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 85/267 (31%), Positives = 141/267 (52%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QL P + S + E G ++LF+RL
Sbjct: 727 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCL 786
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY ++DG + + ++L T F NI
Sbjct: 787 MGHKPVLLRTQYRCHPAISDISNDLFYEGNLVDGISETERGPLLEWLP-----TLCFYNI 841
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG- 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 842 KGPEQIERDNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 898
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
+++N D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 899 VDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 955
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L + +WG ++ + R+
Sbjct: 956 LIVGNLACLRKNR-LWGRVIQHCEGRR 981
Score = 63 (27.2 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 32 FSWSLEDIFSQSFFKDQVEKIPE----SFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
F W LE++ + Q E +P +S+ Y S PL EE ++ +R G + R+
Sbjct: 306 FKW-LEEVTPG--YLTQEESLPSIVLSDIKSIGLYLRSQNIPLFEECQLLVRKGFDFQRK 362
Query: 88 APYAQVIAFEELKP 101
Y ++ F + P
Sbjct: 363 Q-YGKLKKFNAVNP 375
Score = 46 (21.3 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 27 AGHTVFSWSLEDIFSQSFFKDQVEKIPE 54
+G FS LED SF K+ E IP+
Sbjct: 24 SGVLSFSLGLEDQCETSFCKESREVIPQ 51
Score = 40 (19.1 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 538 LSVLRNLWNSLDELNLPCT-------TSKLVLEDFCFKRASL--FFSTASSSYKLHSVEI 588
L+ L+N+ + + LP T +S +V KR + FS ++ ++L S+E
Sbjct: 463 LTTLKNIQDYFNPATLPLTQYLLTMSSSTIVSNKRVNKRKFIPPAFSNINTKFELLSLEA 522
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLA 614
+ +A L + ++T +Q+A
Sbjct: 523 TLQLASELIQAHNLNKDQATALIQIA 548
Score = 39 (18.8 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 276 HRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNV 317
H + +I G G GK+ +++++L +++ ++ T NV
Sbjct: 566 HTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKSEVLTVGNV 607
Score = 38 (18.4 bits), Expect = 1.8e-25, Sum P(3) = 1.8e-25
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 114 WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE 172
W+ IS+S + +L L K +V +R++ + S+ ++E+E KE
Sbjct: 610 WKLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPILPYSLHAGSENENEQLKE 668
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 338 (124.0 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 83/267 (31%), Positives = 144/267 (53%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 628 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 687
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 688 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 742
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG- 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 743 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 799
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 800 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 856
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L ++ +WG ++ + R+
Sbjct: 857 LIVGNLACLRKNQ-LWGRVIQHCEGRE 882
Score = 59 (25.8 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 32 FSWSLEDIFSQSFFKDQVEK--IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
F W LED+ ++ + +S+ Y S PL EE ++ +R G + R+
Sbjct: 207 FKW-LEDVTPGYSTQEGARPGMVLSDIKSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQ- 264
Query: 90 YAQVIAFEELKPYGTNQ 106
Y ++ F + P N+
Sbjct: 265 YGKLKKFTTVNPEFYNE 281
Score = 38 (18.4 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 52 IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA 88
IP FQS Y +F L+E + L + +++A
Sbjct: 108 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 144
Score = 37 (18.1 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 399 EDCVSQYHIYVEKLKEREDCNVNQSEEKECR 429
ED +YV K E+ N++ K+ R
Sbjct: 576 EDLTPTERVYVRKSIEQHKLGTNRTLLKQVR 606
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 279 (103.3 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 107/366 (29%), Positives = 172/366 (46%)
Query: 498 DNVVSKELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
D V+++ V + I AF + + Q R LS ++ L L E T
Sbjct: 277 DAVLARSDSAQIVADVRKDIDQAFAKSKKA-QDKGERGHFLSEIKALRKELKEREETAMT 335
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF---LVIDEAAQLKESESTIPLQLA 614
+ L AS+ +T + + +++ P N+ +VIDE AQ E+ IPL A
Sbjct: 336 AALT-------HASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEASCWIPLLKA 388
Query: 615 GINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISL 672
+L GD QLP + S + G SL ER+ K +L +QYRMH +I
Sbjct: 389 P--KCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQYRMHEAIMQ 446
Query: 673 FPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFINI----IGGREDFIY--HSCR 725
+ + + Y ++ +V + +T TE T + I G E + S
Sbjct: 447 WASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETTIPLLLIDTAGCGLLELEVEDEQSKG 506
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N EV V +Q L A V ++ + VV+PY QV +R+ + Y +++K
Sbjct: 507 NPGEVQLVGLHIQALVDAGVKARD---VAVVAPYNLQVDMLREHLCHRYPE-----LEIK 558
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSES 845
S+DGFQG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + I+ RT + S++
Sbjct: 559 SVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIICDSRT-VGSQA 617
Query: 846 IWGALV 851
G L+
Sbjct: 618 FLGRLL 623
Score = 105 (42.0 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
++ GPPGTGKT TV ++L ++ + L C P+NVA+ L R+
Sbjct: 207 IVHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDNLVERL 251
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 342 (125.4 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 114/392 (29%), Positives = 198/392 (50%)
Query: 466 THLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGI-SWAFVRK 524
TH+ + I +S+ + + K +L + + +N+V + L+K +V G S + +
Sbjct: 1805 THVACAII--DSWHKQNSNKKILAVADSNVAANNLV-EGLKKRNIQAVRVGAGSDSDFHE 1861
Query: 525 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLH 584
+++ H R + L + +N N E + + L LE K+ ++ +T S H
Sbjct: 1862 EAIMEFH-RYKDLLKLRKN--NMQKEAKV--MKALLFLE--AVKKYNVVIATCVGSG--H 1912
Query: 585 SV-EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ + + ++IDE AQ E + IPL N+ VLIGD QLP + S + + G
Sbjct: 1913 EIFDNEKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLD 1971
Query: 644 RSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKQYLT 700
+SL ER + HLLN Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1972 KSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLW 2030
Query: 701 GTEFGTYSFINII----GGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+FI++ G + + Y + + N+ E+ +I +L+ + G IG+
Sbjct: 2031 PNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGI 2088
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
++ Y AQ + ++K + + + +++ SIDGFQG E+D+I+ S VR N +GF+
Sbjct: 2089 LTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLR 2148
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIW 847
+R+NV LTRA+ + + G + TL + + W
Sbjct: 2149 DARRLNVMLTRAKRGVILFGDQFTLANDPANW 2180
Score = 71 (30.1 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--RTLACTP 314
LN+SQ LACL L R + L+ GPPGTGKT ++ + + + LA
Sbjct: 1777 LNDSQ---KLACLSALT--RR--LTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVAD 1829
Query: 315 TNVAITELASRVLK 328
+NVA L + K
Sbjct: 1830 SNVAANNLVEGLKK 1843
Score = 47 (21.6 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 164 DDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
++E N N K+ +N +++K KK++ NIL N
Sbjct: 222 NNEGPNSSFNETKLNNSSNFHINNKEKKNY-----NNILSN 257
Score = 40 (19.1 bits), Expect = 2.0e-24, Sum P(4) = 2.0e-24
Identities = 8/49 (16%), Positives = 24/49 (48%)
Query: 157 VSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
+ + + + + N K N+Y++ N+ H++ ++ I + +P +
Sbjct: 1620 IRIFSAENTKKANVKYNKYRLYLLLNIVTHERMLQALRSITFISSIPTQ 1668
Score = 38 (18.4 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 1609 KDVPSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNY 1658
K + SKR ++ T + +NT LD+L K+ +A+ + + + NY
Sbjct: 2185 KWISSKR--AIVHVTKLNDHLENTDYSLLDKLNKINKAVNLKNINVSDNY 2232
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 342 (125.4 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 114/392 (29%), Positives = 198/392 (50%)
Query: 466 THLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGI-SWAFVRK 524
TH+ + I +S+ + + K +L + + +N+V + L+K +V G S + +
Sbjct: 1805 THVACAII--DSWHKQNSNKKILAVADSNVAANNLV-EGLKKRNIQAVRVGAGSDSDFHE 1861
Query: 525 RYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLH 584
+++ H R + L + +N N E + + L LE K+ ++ +T S H
Sbjct: 1862 EAIMEFH-RYKDLLKLRKN--NMQKEAKV--MKALLFLE--AVKKYNVVIATCVGSG--H 1912
Query: 585 SV-EIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
+ + + ++IDE AQ E + IPL N+ VLIGD QLP + S + + G
Sbjct: 1913 EIFDNEKFERVIIDECAQSIEPSNLIPLGHY-CNNLVLIGDHKQLPPTIISPDAIKLGLD 1971
Query: 644 RSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANV--KSKSYEKQYLT 700
+SL ER + HLLN Q RMH SI +FPN FY N+ L ANV +++ K +L
Sbjct: 1972 KSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYDNK-LKTANVTEENRPIIKGFLW 2030
Query: 701 GTEFGTYSFINII----GGREDFIYHSCR-NIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+FI++ G + + Y + + N+ E+ +I +L+ + G IG+
Sbjct: 2031 PNPKCRLAFIDVSIGKPGSKFENAYGTSKFNLYEIEPLITVLKSIINE--GCVSVDEIGI 2088
Query: 756 VSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
++ Y AQ + ++K + + + +++ SIDGFQG E+D+I+ S VR N +GF+
Sbjct: 2089 LTAYDAQKMKLKKAVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLR 2148
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIW 847
+R+NV LTRA+ + + G + TL + + W
Sbjct: 2149 DARRLNVMLTRAKRGVILFGDQFTLANDPANW 2180
Score = 71 (30.1 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC--RTLACTP 314
LN+SQ LACL L R + L+ GPPGTGKT ++ + + + LA
Sbjct: 1777 LNDSQ---KLACLSALT--RR--LTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVAD 1829
Query: 315 TNVAITELASRVLK 328
+NVA L + K
Sbjct: 1830 SNVAANNLVEGLKK 1843
Score = 47 (21.6 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 164 DDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPN 204
++E N N K+ +N +++K KK++ NIL N
Sbjct: 222 NNEGPNSSFNETKLNNSSNFHINNKEKKNY-----NNILSN 257
Score = 40 (19.1 bits), Expect = 2.0e-24, Sum P(4) = 2.0e-24
Identities = 8/49 (16%), Positives = 24/49 (48%)
Query: 157 VSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNK 205
+ + + + + N K N+Y++ N+ H++ ++ I + +P +
Sbjct: 1620 IRIFSAENTKKANVKYNKYRLYLLLNIVTHERMLQALRSITFISSIPTQ 1668
Score = 38 (18.4 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 1609 KDVPSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMVDNGNNGNY 1658
K + SKR ++ T + +NT LD+L K+ +A+ + + + NY
Sbjct: 2185 KWISSKR--AIVHVTKLNDHLENTDYSLLDKLNKINKAVNLKNINVSDNY 2232
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 333 (122.3 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 82/267 (30%), Positives = 143/267 (53%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 629 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 688
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY +++G + +S ++L T F N+
Sbjct: 689 MGHKPILLRTQYRCHPTISAIANDLFYEGNLMNGISETERSPLLEWLP-----TLCFYNV 743
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG- 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 744 KGLEQIERGNSFHNVAEAAFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 800
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++++ + V+V ++D FQG E++III+S VR +GFI +R+NVALTR R L
Sbjct: 801 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRRHL 857
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L + +WG ++ + R+
Sbjct: 858 LIVGNLACLRKNR-LWGRVIQHCEGRE 883
Score = 52 (23.4 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 57 QSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAPYAQVIAFEELKPYGTNQ 106
+S+ Y S PL EE ++ +R G + R+ Y ++ F + P N+
Sbjct: 234 KSIGFYLRSQKIPLYEECQLFVRKGFDFQRKR-YGKLKKFTTVDPEFYNE 282
Score = 44 (20.5 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 18/74 (24%), Positives = 34/74 (45%)
Query: 276 HRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLAC-----------TPTNVAITEL 322
H + +I G G GK+ +++++L +++ KC L + TNVA+ +
Sbjct: 468 HTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKLLISSSTNVAVDRV 527
Query: 323 ASRVLKLVKESYKR 336
+L L E + R
Sbjct: 528 LLGLLSLGFEKFVR 541
Score = 38 (18.4 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 114 WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE 172
W+ IS+S + +L L K +V +R++ + S+ ++E+E KE
Sbjct: 512 WKLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPVLPYSLYAGSENENEQLKE 570
Score = 38 (18.4 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 17/74 (22%), Positives = 33/74 (44%)
Query: 538 LSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNFLVID 597
L+ L+N+ + + LP T L + ST +S+ +++ + P F I+
Sbjct: 365 LTTLKNIRDCFNPATLPLTQYLLTMSS----------STTTSNKRVNKRKFIPPAFSNIN 414
Query: 598 EAAQLKESESTIPL 611
+L E+T+ L
Sbjct: 415 TKFELLSIEATLKL 428
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 328 (120.5 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 85/269 (31%), Positives = 142/269 (52%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEA---GFGRSLFERL 650
+V+DE +Q+ E S +P+ +L+GD QLP ++ SD A G ++LF+RL
Sbjct: 623 VVLDECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQG--SDAAHGNGLEQTLFDRL 680
Query: 651 TSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFI 710
+ H L QYR HP IS N FY +++G + + +S ++L T F
Sbjct: 681 CLMGHKPIQLRTQYRCHPVISAIANDLFYEGNLVNGISERERSPVLEWLP-----TLCFY 735
Query: 711 NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI 770
N+ G + +S N+ E + +K+++ L + + IGV++ Y +Q+ I +
Sbjct: 736 NVTGTEQVERENSFVNVAEAAFTLKLIRSLIASGLEGSM---IGVITLYKSQMYKICSLL 792
Query: 771 G-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ ++ D V+V ++D FQG E++III+S VR +GFI +R+NVALTR R
Sbjct: 793 SAVDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGRR 849
Query: 830 CLWILGSERTLISSESIWGALVCDAKARQ 858
L I+GS L ++ +WG ++ K R+
Sbjct: 850 HLLIIGSLSCLRKNQ-LWGRVIQHCKGRE 877
Score = 54 (24.1 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 32 FSWSLEDIFSQSFFKD--QVEKIPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRR 87
F W LED+ + ++ Q I +S+ Y S + EE ++ LR G + ++
Sbjct: 202 FKW-LEDVTPEQLSQNESQPNMIFNDIKSIGSYLRSQKIAVYEECQLLLRKGFDFQKK 258
Score = 45 (20.9 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 276 HRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KC-----------RTLACTPTNVAITEL 322
H + +I G G GK+ +++++L L+ + KC + L + TNVA+ +
Sbjct: 462 HSLPITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRV 521
Query: 323 ASRVLKLVKESYKR 336
+L L E + R
Sbjct: 522 LLGLLSLGFEKFIR 535
Score = 41 (19.5 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 114 WRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDDEDENKKE 172
W+ IS+S + +L L K +V +R++ + S+ D+E E KE
Sbjct: 506 WKLLISSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHASSDNESEQLKE 564
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 280 (103.6 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 91/272 (33%), Positives = 137/272 (50%)
Query: 585 SVEIKPLNF--LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
S ++K F ++IDEA+Q E + IPL G+N +L GD QL V+SK
Sbjct: 375 SRQLKGQRFDAVIIDEASQALEPQCWIPL--LGMNKVILAGDHMQLSPNVQSKRPYI--- 429
Query: 643 GRSLFERLTSLNHS--KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSK------SY 694
S+FERL K LNIQYRMH IS FP+ FY ++++ VK + +
Sbjct: 430 --SMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENV 487
Query: 695 EKQYLTGTEF------GTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
E+ LT + G Y + ++F S N E V + L +A + +K
Sbjct: 488 EETELTDSPIYFYDTLGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAK 547
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTG 808
I VV+PY AQV IR+ + + G V++ S+D QG E++ II S VR N
Sbjct: 548 D---IAVVTPYNAQVALIRQLL-----KEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDV 599
Query: 809 GSIGFISKPQRVNVALTRARHCLWILGSERTL 840
+GF+++ +R+NVA+TR + L ++G T+
Sbjct: 600 REVGFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
Score = 91 (37.1 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 238 SVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKT-VS 296
S+ +K D K+ F+ LN SQ A+ + + + LI GPPGTGKT T V
Sbjct: 194 SIDQKLIGDIKY---FNKELNASQKKAVKFSIAVKE------LSLIHGPPGTGKTHTLVE 244
Query: 297 MLLLTLLRIKCRTLACTPTNVAITELASRV 326
++ +LR K R L C +N+A+ + R+
Sbjct: 245 IIQQLVLRNK-RILVCGASNLAVDNIVDRL 273
Score = 44 (20.5 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 25 GFAGHTVFSWSLEDIFSQ-------SFFKDQVEKIPESFQSVKQ 61
GF G T+ + + FS SF V I + FQS K+
Sbjct: 67 GFGGKTIIDFEKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKK 110
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 338 (124.0 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 83/267 (31%), Positives = 144/267 (53%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVE-SKISDEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ +L+GD QLP ++ S + E G ++LF+RL
Sbjct: 1806 VVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCL 1865
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY+ +++G +S ++L T F N+
Sbjct: 1866 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP-----TLCFYNV 1920
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG- 771
G + +S N+ E + +K++Q L + + IGV++ Y +Q+ + +
Sbjct: 1921 KGLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSM---IGVITLYKSQMYKLCHLLSA 1977
Query: 772 FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCL 831
++ + D TV+V ++D FQG E++III+S VR +GFI +R+NVALTR + L
Sbjct: 1978 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTR---QVGFIDSEKRMNVALTRGKRHL 2034
Query: 832 WILGSERTLISSESIWGALVCDAKARQ 858
I+G+ L ++ +WG ++ + R+
Sbjct: 2035 LIVGNLACLRKNQ-LWGRVIQHCEGRE 2060
Score = 59 (25.8 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 32 FSWSLEDIFSQSFFKDQVEK--IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRAP 89
F W LED+ ++ + +S+ Y S PL EE ++ +R G + R+
Sbjct: 1385 FKW-LEDVTPGYSTQEGARPGMVLSDIKSIGLYLRSQKIPLYEECQLLVRKGFDFQRKQ- 1442
Query: 90 YAQVIAFEELKPYGTNQ 106
Y ++ F + P N+
Sbjct: 1443 YGKLKKFTTVNPEFYNE 1459
Score = 38 (18.4 bits), Expect = 9.2e-22, Sum P(3) = 9.2e-22
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 52 IPESFQSVKQYFGSFVFPLLEETRMQLRSGLEAMRRA 88
IP FQS Y +F L+E + L + +++A
Sbjct: 1286 IPAVFQSPAHYKQTFTSCLIEHLNILLFGLAQNLQKA 1322
Score = 37 (18.1 bits), Expect = 6.3e-24, Sum P(3) = 6.3e-24
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 399 EDCVSQYHIYVEKLKEREDCNVNQSEEKECR 429
ED +YV K E+ N++ K+ R
Sbjct: 1754 EDLTPTERVYVRKSIEQHKLGTNRTLLKQVR 1784
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 258 (95.9 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 92/301 (30%), Positives = 147/301 (48%)
Query: 561 VLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+LE R L + ASS L + + +VIDE AQ E+ +PL A
Sbjct: 335 MLESLTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDECAQALEASCWVPLLKA--RKC 392
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQ 677
+L GD QLP + S + AG SL ERL + +L +QYRMH +I+ + +
Sbjct: 393 ILAGDHKQLPPTIISHKAALAGLALSLMERLVEERGAGVLRMLTVQYRMHQAIAQWASEA 452
Query: 678 FYRNQILDGANVKSKSY-EKQYLTGTE-FGT-YSFINIIG-GR---EDFIYHSCRNIVEV 730
Y ++ A+V + + TE G ++ G G E+ S N EV
Sbjct: 453 LYHGRLTAHASVAGHLLRDLPGVAATEETGIPLLLVDTAGCGLFELEEEDEQSKGNPGEV 512
Query: 731 SAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
V +Q L A V + + V++PY QV +R+ + + +++KS+DGF
Sbjct: 513 RLVRLHVQALVDAGVPAGD---VAVITPYNLQVDLLRQSLAQRHPE-----LEIKSVDGF 564
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGAL 850
QG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + ++ RT +S+ + L
Sbjct: 565 QGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTL 623
Query: 851 V 851
V
Sbjct: 624 V 624
Score = 114 (45.2 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
+++ L+ SQ A+L L + + + +I GPPGTGKT TV ++L ++ + L C
Sbjct: 185 YNTALDASQKEAVLFALSQKE------LAIIHGPPGTGKTTTVVEIILQAVKQGSKVLCC 238
Query: 313 TPTNVAITELASRVLK 328
P+NVA+ L R+ +
Sbjct: 239 APSNVAVDNLVERLAR 254
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 187 (70.9 bits), Expect = 9.4e-24, Sum P(3) = 9.4e-24
Identities = 64/187 (34%), Positives = 92/187 (49%)
Query: 588 IKPLN---FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGR 644
IK LN ++IDEA Q E + IPL L + VL+GD+ QL S I +
Sbjct: 798 IKSLNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQLSCF--SLIPN---LSL 852
Query: 645 SLFER--LTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYE-----KQ 697
SLFER L + H+L+ QYRMHP IS FP +FY + DG + ++ E
Sbjct: 853 SLFERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEGVISSPL 912
Query: 698 YLTGTEFGT--YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
Y T+ S N + RED Y + N E+ + ++L+ L G K + IG+
Sbjct: 913 YFWDTKGNAREQSVRNFL--REDGGY-TYTNRDEIGYIQQVLRTLIIT-KGVKPE-QIGI 967
Query: 756 VSPYTAQ 762
++PY+ Q
Sbjct: 968 ITPYSGQ 974
Score = 157 (60.3 bits), Expect = 9.4e-24, Sum P(3) = 9.4e-24
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLI 841
+ + SID FQG E+D +I+S VR NT G IGF+ +R+NVALTRA++ L ++G ++ L
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQ 1078
Query: 842 SSESIW 847
+ + +W
Sbjct: 1079 NGDKLW 1084
Score = 82 (33.9 bits), Expect = 9.4e-24, Sum P(3) = 9.4e-24
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRT---LACT 313
LNESQ + + L + + ++ GPPGTGKT T+ ++L LL T L
Sbjct: 640 LNESQKKGVQSVLN-------NSITVLQGPPGTGKTSTIYEIILQLLD-SLNTYPILVVA 691
Query: 314 PTNVAITELASRVL 327
+N+AI +A +++
Sbjct: 692 ASNIAIDNIAEKLM 705
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 133 ILVLADFKPEKVSDLRRVGRTWTFVSVTTVPDD 165
+++ KPE++ + +S T V DD
Sbjct: 954 LIITKGVKPEQIGIITPYSGQRDLISATLVKDD 986
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 261 (96.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 92/294 (31%), Positives = 145/294 (49%)
Query: 570 ASLFFST---ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDEC 626
AS+ +T AS+ L + + +VIDE AQ E+ IPL A +L GD
Sbjct: 342 ASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEASCWIPLLKA--RKCILAGDHK 399
Query: 627 QLPAMVESKISDEAGFGRSLFERLTSLNHSKHL--LNIQYRMHPSISLFPNLQFYRNQIL 684
QLP + S + AG SL ERL + + L L +QYRMH +I+ + + Y Q+
Sbjct: 400 QLPPTIVSHKAALAGLSLSLMERLAERHGAGALRMLTVQYRMHQAIARWASEALYHGQLT 459
Query: 685 DGANVKSKSY-EKQYLTGTE-FGT-YSFINIIG-GR---EDFIYHSCRNIVEVSAVIKIL 737
+V + + TE G ++ G G E+ S N EV V +
Sbjct: 460 AHPSVAGHLLRDLPGVAATEETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHV 519
Query: 738 QKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
Q L A V + I V++PY QV +R+ + ++++S+DGFQG E++
Sbjct: 520 QALVDAGV---RAADIAVITPYNLQVDLLRQSLAHRLPE-----LEIRSVDGFQGREKEA 571
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
+I+S VR N G +GF+++ +R+NVA+TRAR + ++ RT +S+ + LV
Sbjct: 572 VILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRT-VSNHAFLKTLV 624
Score = 108 (43.1 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 257 LNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
L+ SQ A+L L + + + +I GPPGTGKT TV ++L ++ + L C P+N
Sbjct: 189 LDASQQEAVLFALSQKE------LAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSN 242
Query: 317 VAITELASRV 326
VA+ L R+
Sbjct: 243 VAVDNLVERL 252
Score = 41 (19.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 227 DSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCG-HRSGVELIWG 285
+S V ++ EL ++R + +E+ + +L E Q + CL +L R+G ++G
Sbjct: 7 ESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGV--CLLKLQVSSQRTG---LYG 61
Query: 286 PPGTGKTKTVSMLLLTLLRIKCRTLACTPTN 316
LL+TL +C + A P+N
Sbjct: 62 -----------RLLITLEPRRCVSAAVLPSN 81
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 259 (96.2 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 92/290 (31%), Positives = 142/290 (48%)
Query: 561 VLEDFCFKRASLFFST-ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA 619
+LE L +T AS+ L + + +VIDE AQ E+ IPL A
Sbjct: 338 MLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA--RKC 395
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQ 677
+L GD QLP S + AG SL ERL ++ L +QYRMH +I + +
Sbjct: 396 ILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDT 455
Query: 678 FYRNQILDGANV-KSKSYEKQYLTGTE-FGT-YSFINIIG-GR---EDFIYHSCRNIVEV 730
Y Q+ ++V + + + TE G ++ G G E+ S N EV
Sbjct: 456 MYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEV 515
Query: 731 SAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGF 790
V +Q L A V ++ I VVSPY QV +R+ + + +++KS+DGF
Sbjct: 516 RLVSLHIQALVDAGVPARD---IAVVSPYNLQVDLLRQSLVHRHPE-----LEIKSVDGF 567
Query: 791 QGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
QG E++ +I+S VR N G +GF+++ +R+NVA+TRAR + ++ RT+
Sbjct: 568 QGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTV 617
Score = 118 (46.6 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
F++ L+ SQ A+L L + + + +I GPPGTGKT TV ++L ++ + L C
Sbjct: 188 FNTCLDTSQKEAVLFALSQKE------LAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 241
Query: 313 TPTNVAITELASRVLKLVKESYKR 336
P+N+A+ L R L L K+ R
Sbjct: 242 APSNIAVDNLVER-LALCKQRILR 264
Score = 40 (19.1 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1523 SRLLPLEFCDALRKIENHNCLNVHEISQ 1550
S+ + LEF +L +H+ L VH+I++
Sbjct: 739 SKKMQLEFPPSLN---SHDRLRVHQIAE 763
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 261 (96.9 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 88/275 (32%), Positives = 136/275 (49%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
ASS L + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPENHFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTISHK 411
Query: 637 SDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+ AG RSL ERL + + +L +QYRMH +I+ + + Y Q+ +V
Sbjct: 412 AALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLL 471
Query: 695 EK-QYLTGTEFGTYSFINI-IGG-------REDFIYHSCRNIVEVSAVIKILQKLYKAWV 745
+ + TE + + I G ED S N EV V +Q L A V
Sbjct: 472 KDLPGVADTEETSVPLLLIDTAGCGLLELDEEDS--QSKGNPGEVRLVTLHIQALVDAGV 529
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC 805
+ I V++PY QV +R+ + NK +++KS+DGFQG E++ +I++ VR
Sbjct: 530 HAGD---IAVIAPYNLQVDLLRQSLS----NKHP-ELEIKSVDGFQGREKEAVILTFVRS 581
Query: 806 NTGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
N G +GF+++ +R+NVA+TRAR + ++ RT+
Sbjct: 582 NRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTV 616
Score = 112 (44.5 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKR 336
V +I GPPGTGKT TV ++L ++ + L C P+NVA+ L R L L K+ R
Sbjct: 208 VAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLVER-LALCKKRILR 263
Score = 43 (20.2 bits), Expect = 3.5e-23, Sum P(3) = 3.5e-23
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 409 VEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFKCAVV-SLRNCIFIFCTH 467
V +++ D ++++ + ++E + E K K ++ER + A+V SL + T+
Sbjct: 292 VADIRKDIDQVFGKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATN 351
Query: 468 L------PKSYISENSFQEMV 482
P + EN F +V
Sbjct: 352 TGASSDGPLKLLPENHFDVVV 372
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 218 (81.8 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 71/238 (29%), Positives = 122/238 (51%)
Query: 664 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKQYLTGTEFGTYSFINIIGGRE-DFI 720
YR HP+I PN FY N++ AN ++ +++ + ++L F F ++G E +
Sbjct: 748 YRSHPAILKIPNELFYENELQVFANQMEREAFCQWEHLPRKGFPVV-FHGVMGKDEREAN 806
Query: 721 YHSCRNIVEVSAVIKILQKLYKAWVGSK--QKVS---IGVVSPYTAQVVAIRKKIGFEYE 775
S N+ E+ ++ L L + G K K+ IG+++PY QV IRK + E
Sbjct: 807 SPSFFNVTEIEVIVNYLNNLMQTQ-GKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVGE 865
Query: 776 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG-------SIGFISKPQRVNVALTRAR 828
K +KV S++ FQG E +II+STVR + +IGF+S +R NVA+TRA+
Sbjct: 866 LKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRAK 925
Query: 829 HCLWILGSERTLISSESIWGALV--CDAKARQCFFN---ADEERNLAK--ARLEVSKE 879
L ++G+ ++S + W + C+ + F+ A+ E ++ A L++S +
Sbjct: 926 GLLIVVGNP-VILSKDPTWQKFIQYCEQEQGYTGFDYKDAEGEEDVVSRLASLKISSD 982
Score = 103 (41.3 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 594 LVIDEAAQLKESESTIPLQLAGI-----NHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ IDEA Q E E I + AG+ VL GD QL ++ S ++ G G+SL E
Sbjct: 660 IFIDEAGQAVEPECIIGI--AGLLDPLKGQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLE 717
Query: 649 RLTSLN---------HSKH-------LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL N +SK+ LL YR HP+I PN FY N++ AN
Sbjct: 718 RLMKRNALYQKSQDDNSKYDSRFVTKLLR-NYRSHPAILKIPNELFYENELQVFAN 772
Score = 92 (37.4 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRT--LACTPTNVAITELASRVL 327
LI+GPPGTGKT TV + + + K ++ LAC P+N A L R+L
Sbjct: 538 LIFGPPGTGKTVTVVEAIKQVDKSKAQSHILACAPSNSACDLLCERLL 585
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 185 (70.2 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 62/201 (30%), Positives = 96/201 (47%)
Query: 590 PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFER 649
P + +++DEA Q E E+ PL + N VL+GD QLP V S + E G+ +S+ R
Sbjct: 23 PFSCVIVDEAGQSCEVETLSPL-IHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 81
Query: 650 LTSL---NHSKHL--------LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
L N +++ L IQYRMHP I LFP+ Y N+K+ +
Sbjct: 82 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNK------NLKTNRLTETI 135
Query: 699 LTGTE--FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
+E F Y ++ G E S N+ E+ V++I+ KL K +IG++
Sbjct: 136 RCSSEWPFQPYLVFDVGDGSEQRDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGII 194
Query: 757 SPYTAQVVAIRKKIGFEYENK 777
+ Y AQ I+K + E++ K
Sbjct: 195 THYKAQKTMIQKDLEKEFDKK 215
Score = 162 (62.1 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 34/76 (44%), Positives = 54/76 (71%)
Query: 783 KVKSIDGFQGGEEDIIIISTVRCNT-GGSIGFISKPQRVNVALTRARHCLWILGSERTLI 841
+V ++D FQG ++D II++ VR + GSIGF++ QR+NV +TRA++ L+ILG RTL+
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 842 SSESIWGALVCDAKAR 857
++ W L+ DA+ R
Sbjct: 334 ENQH-WYELIQDAQKR 348
Score = 41 (19.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 316 NVAITELASRVLKLVKESYKRDSRSNTPI 344
NV +L ++KL+KE K S N I
Sbjct: 165 NVQEIKLVMEIIKLIKEKRKDISFRNIGI 193
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 259 (96.2 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 83/256 (32%), Positives = 129/256 (50%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+V+DE AQ E+ IPL A +L GD QLP S + AG RSL ERL
Sbjct: 371 VVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEK 428
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFI 710
+ + +L +QYRMH +I+ + + Y Q+ +V + + TE + +
Sbjct: 429 HGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLL 488
Query: 711 NI-IGG-----REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
I G E+ S N EV V +Q L A V Q I V++PY QV
Sbjct: 489 LIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV---QAGDIAVIAPYNLQVD 545
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+R+ + NK +++KS+DGFQG E++ +I++ VR N G +GF+++ +R+NVA+
Sbjct: 546 LLRQSLS----NKHP-ELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAV 600
Query: 825 TRARHCLWILGSERTL 840
TRAR + ++ T+
Sbjct: 601 TRARRHVAVICDSHTV 616
Score = 118 (46.6 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
+++TL+ SQ A+ L + + V +I GPPGTGKT TV ++L ++ + L C
Sbjct: 187 YNTTLDPSQKEAVSFALAQKE------VAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 313 TPTNVAITELASRVLKLVKESYKR 336
P+N+A+ L R L L K+ R
Sbjct: 241 APSNIAVDNLVER-LALCKKQILR 263
Score = 40 (19.1 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 1514 RDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAF 1552
R ++ S+ LEF +L +H+ L VH++++ F
Sbjct: 728 RAMIEEFVASKEAQLEFPTSL---SSHDRLRVHQLAEEF 763
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 422 QSEEKECRKETEGSKGERKPFLKYVRERFKCAVV-SLRNCIFIFCTH 467
++++ + ++E + E K K ++ER + A+V SL + T+
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATN 351
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 259 (96.2 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 83/256 (32%), Positives = 129/256 (50%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+V+DE AQ E+ IPL A +L GD QLP S + AG RSL ERL
Sbjct: 371 VVVDECAQALEASCWIPLLKAP--KCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEK 428
Query: 654 NHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK-QYLTGTEFGTYSFI 710
+ + +L +QYRMH +I+ + + Y Q+ +V + + TE + +
Sbjct: 429 HGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLL 488
Query: 711 NI-IGG-----REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
I G E+ S N EV V +Q L A V Q I V++PY QV
Sbjct: 489 LIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV---QAGDIAVIAPYNLQVD 545
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+R+ + NK +++KS+DGFQG E++ +I++ VR N G +GF+++ +R+NVA+
Sbjct: 546 LLRQSLS----NKHP-ELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAV 600
Query: 825 TRARHCLWILGSERTL 840
TRAR + ++ T+
Sbjct: 601 TRARRHVAVICDSHTV 616
Score = 118 (46.6 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
+++TL+ SQ A+ L + + V +I GPPGTGKT TV ++L ++ + L C
Sbjct: 187 YNTTLDPSQKEAVSFALAQKE------VAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 313 TPTNVAITELASRVLKLVKESYKR 336
P+N+A+ L R L L K+ R
Sbjct: 241 APSNIAVDNLVER-LALCKKQILR 263
Score = 40 (19.1 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 1514 RDLLGRKYVSRLLPLEFCDALRKIENHNCLNVHEISQAF 1552
R ++ S+ LEF +L +H+ L VH++++ F
Sbjct: 728 RAMIEEFVASKEAQLEFPTSL---SSHDRLRVHQLAEEF 763
Score = 38 (18.4 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 422 QSEEKECRKETEGSKGERKPFLKYVRERFKCAVV-SLRNCIFIFCTH 467
++++ + ++E + E K K ++ER + A+V SL + T+
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATN 351
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 312 (114.9 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 90/295 (30%), Positives = 149/295 (50%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKIS-DEAGFGRSLFERLTS 652
+V+DE +Q+ E S +P+ VL+GD QLP ++ S E G ++LF+RL
Sbjct: 624 VVLDECSQMTEPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCL 683
Query: 653 LNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI 712
+ H LL QYR HP+IS N FY ++DG + K +S +L T F ++
Sbjct: 684 MGHKTILLRTQYRCHPAISAIANELFYEGNLIDGVSEKERSPLLDWLP-----TLCFYSV 738
Query: 713 IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGF 772
G + +S N+ EV +K +Q L + + ++GV++ Y +Q+ ++ +
Sbjct: 739 NGLEQIERDNSFYNMAEVHFTVKFIQALIASGIDGS---AVGVITFYKSQMYKLQNLL-- 793
Query: 773 EYENKDGFTVK---VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARH 829
+ + F VK V ++D FQG E++I+++S VR GF +R+NVALTRA+
Sbjct: 794 RSIHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTR---QTGFTDSEKRMNVALTRAKR 850
Query: 830 CLWILGSERTLISSESIWGALVCDAKAR----QCFFNADEE-RNLAKARLEVSKE 879
L I+G+ L S ++ ++ K R Q +++ N+ K LE KE
Sbjct: 851 HLLIVGNLACL-SKNRLYERVINHCKGRENGLQHGSQCEQQLNNVLKYYLEEKKE 904
Score = 39 (18.8 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRI 305
+ +I G G GK+ +S+++L L+++
Sbjct: 467 ITIIHGVFGAGKSFLLSVVILFLVQL 492
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 257 (95.5 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 87/269 (32%), Positives = 137/269 (50%)
Query: 594 LVIDEAAQLKESESTIPLQLAGIN--HA-VLIGDECQLPAMVESKISDEA--GFGRSLFE 648
L+IDE +Q E + IPL +A N H VL GD QLP ++++ +LF+
Sbjct: 392 LIIDEVSQAMEPQCWIPL-IAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFD 450
Query: 649 RLTSLNHSKHL---LNIQYRMHPSISLFPNLQFYRNQILDGANVKSK---SYEKQYLTGT 702
R+ + + + LN+QYRM+ I FP+ Y ++L A V ++ T +
Sbjct: 451 RIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPS 510
Query: 703 EFGTYSFINII-----GGR------EDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
E + I +I G E I S N E++ V + ++ L V
Sbjct: 511 EDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPEN--- 567
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
SIGV+SPY AQV ++K I E + D +++ ++DGFQG E+D+II+S VR N +
Sbjct: 568 SIGVISPYNAQVSHLKKLIHDELKLTD---IEISTVDGFQGREKDVIILSLVRSNEKFEV 624
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTL 840
GF+ + +R+NVA+TR R L ++G+ L
Sbjct: 625 GFLKEERRLNVAMTRPRRQLVVVGNIEVL 653
Score = 91 (37.1 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKC---RTLACTPTNVAITELASRVLKLV 330
+I GPPGTGKT T+ L+ LL IK R L C P+N+++ + R+ LV
Sbjct: 226 IIHGPPGTGKTFTLIELIQQLL-IKNPEERILICGPSNISVDTILERLTPLV 276
Score = 37 (18.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 168 ENKKENRYKVKARNNMQV---HDKTKKSFFFIYLTNILPNKRIWNSLH 212
ENKK YK + N ++ KK F I+ ++ + +LH
Sbjct: 322 ENKKLKNYKQRKENWNEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLH 369
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 268 (99.4 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 103/342 (30%), Positives = 163/342 (47%)
Query: 549 DELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESE 606
DEL C K + R L ST S+ L++ + +F +++DEA Q E E
Sbjct: 501 DELIFKCPPLKALT------RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPE 554
Query: 607 STIPLQLAGINHAVLI--GDECQLPAMVESKISDEAGFGRSLFERLTSLNH-----SKHL 659
+ I + + V++ GD QL ++ S+ ++ G G+S ERL ++ ++
Sbjct: 555 NMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYV 614
Query: 660 LNI--QYRMHPSISLFPNLQFYRNQILDGA-NVKSKSYEKQYLTGTEFGTYSFINIIGGR 716
+ YR HP I P+ FY +++ + S +L EF F I G
Sbjct: 615 TKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMV-FYGIQGCD 673
Query: 717 E-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE 775
E + S N +E+S VI+ +++L Q+ IGV++PY QV+ I++ + +
Sbjct: 674 EREGNNPSWFNRIEISKVIETIKRLTAN--DCVQEEDIGVITPYRQQVMKIKEVL----D 727
Query: 776 NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS-------IGFISKPQRVNVALTRAR 828
D VKV S++ FQG E+ +IIISTVR + +GF+S P+R NVA+TRA
Sbjct: 728 RLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAI 787
Query: 829 HCLWILGSERTLISSESIWGALV--C-DAKARQ-CFFNADEE 866
L I+G+ +I + W L+ C D A Q C EE
Sbjct: 788 SLLVIIGNPH-IICKDMNWNKLLWRCVDNNAYQGCGLPEQEE 828
Score = 84 (34.6 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIK--CRTLACTPTNVAITELASRVLKL 329
+I GPPGTGKT T+ ++ L + R L C P+N A + ++L L
Sbjct: 418 VIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCL 467
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 262 (97.3 bits), Expect = 9.0e-22, Sum P(4) = 9.0e-22
Identities = 87/273 (31%), Positives = 133/273 (48%)
Query: 577 ASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKI 636
ASS L + + +V+DE AQ E+ IPL A +L GD QLP S
Sbjct: 354 ASSDGPLKLLPEDYFDVVVVDECAQALEASCWIPLLKAP--KCILAGDHRQLPPTTVSHR 411
Query: 637 SDEAGFGRSLFERLTSLNHSK--HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY 694
+ AG RSL ERL + + +L +QYRMH +I + + Y Q +V
Sbjct: 412 AALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLL 471
Query: 695 EK-QYLTGTEFGTYSFINI-IGG-----REDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
+ +T TE + I G E+ S N EV V +Q L A V
Sbjct: 472 KDLPGVTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGV-- 529
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
Q I V++PY QV +R+ + NK +++KS+DGFQG E++ ++++ VR N
Sbjct: 530 -QAGDIAVIAPYNLQVDLLRQSLS----NKHP-ELEIKSVDGFQGREKEAVLLTFVRSNR 583
Query: 808 GGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
G +GF+++ +R+NVA+TRAR + ++ T+
Sbjct: 584 KGEVGFLAEDRRINVAVTRARRHVAVICDSHTV 616
Score = 112 (44.5 bits), Expect = 9.0e-22, Sum P(4) = 9.0e-22
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLAC 312
+++TL+ SQ A+ L + + + +I GPPGTGKT TV ++L ++ + L C
Sbjct: 187 YNTTLDLSQKEAVSFALAQKE------LAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC 240
Query: 313 TPTNVAITELASRVLKLVKESYKR 336
P+N+A+ L R L L K+ R
Sbjct: 241 APSNIAVDNLVER-LALCKKRILR 263
Score = 38 (18.4 bits), Expect = 9.0e-22, Sum P(4) = 9.0e-22
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 1528 LEFCDALRKIENHNCLNVHEISQAF 1552
LEF +L +H+ L VH++++ F
Sbjct: 742 LEFPTSL---SSHDRLRVHQLAEEF 763
Score = 37 (18.1 bits), Expect = 9.0e-22, Sum P(4) = 9.0e-22
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 403 SQYHIYVEKLKEREDCNVNQS 423
S+ + ++LKERE+ + QS
Sbjct: 320 SEIKLLRKELKEREEAAIVQS 340
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 252 (93.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 76/223 (34%), Positives = 119/223 (53%)
Query: 634 SKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S S + +LF+RL H K LL++QYRM+ SI FP++Q Y NQ+ +V+
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 691 SKSYEKQYLTGTEFGTYSFINII-----GGR------EDFIYHSCRNIVEVSAVIKILQK 739
S L G E + I GG E S N +E+ V ++K
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE-------NKDGFTVKVKSIDGFQG 792
L + V Q IGV++PY+AQV ++K++G E +KDG +++ ++DGFQG
Sbjct: 577 LLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQG 632
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
E+++II++ VR N IGF+S+ +R+NVA+TR + L ++G
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVG 675
Score = 136 (52.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 594 LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPAMVESKISDEAG----------F 642
++IDE +Q E + IPL L+ V+ GD QLP ++++ S+ +
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 643 GRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPNLQFYRNQI 683
+LF+RL H K LL++QYRM+ SI FP++Q Y NQ+
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQL 511
Score = 92 (37.4 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 278 SGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
S + +I GPPGTGKT T+ L+ L + L C P+N+++ + R+
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILERL 285
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 35 SLEDIFSQSFFKDQVEKIPESFQSV 59
SLE I S+++ +D + +I QSV
Sbjct: 311 SLE-ILSKTYGRDIINEILNDIQSV 334
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 252 (93.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 76/223 (34%), Positives = 119/223 (53%)
Query: 634 SKISDEAGFGRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
S S + +LF+RL H K LL++QYRM+ SI FP++Q Y NQ+ +V+
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVR 518
Query: 691 SKSYEKQYLTGTEFGTYSFINII-----GGR------EDFIYHSCRNIVEVSAVIKILQK 739
S L G E + I GG E S N +E+ V ++K
Sbjct: 519 EISLVD--LPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKK 576
Query: 740 LYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYE-------NKDGFTVKVKSIDGFQG 792
L + V Q IGV++PY+AQV ++K++G E +KDG +++ ++DGFQG
Sbjct: 577 LLSSGV---QPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDG-QIEISTVDGFQG 632
Query: 793 GEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
E+++II++ VR N IGF+S+ +R+NVA+TR + L ++G
Sbjct: 633 REKEVIILTLVRSNDSREIGFLSEQRRLNVAMTRPKRQLCVVG 675
Score = 136 (52.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 594 LVIDEAAQLKESESTIPLQLAG-INHAVLIGDECQLPAMVESKISDEAG----------F 642
++IDE +Q E + IPL L+ V+ GD QLP ++++ S+ +
Sbjct: 408 IIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASIL 467
Query: 643 GRSLFERLTSLNHS---KHLLNIQYRMHPSISLFPNLQFYRNQI 683
+LF+RL H K LL++QYRM+ SI FP++Q Y NQ+
Sbjct: 468 ATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQL 511
Score = 92 (37.4 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 278 SGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRV 326
S + +I GPPGTGKT T+ L+ L + L C P+N+++ + R+
Sbjct: 237 SNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTILERL 285
Score = 37 (18.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 35 SLEDIFSQSFFKDQVEKIPESFQSV 59
SLE I S+++ +D + +I QSV
Sbjct: 311 SLE-ILSKTYGRDIINEILNDIQSV 334
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 267 (99.0 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 92/310 (29%), Positives = 151/310 (48%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQ 627
R L + ++S L ++++ + +IDEA E E+ IPL + VL+GD Q
Sbjct: 2605 RVILCTCSCAASASLRKLDVRQI---LIDEAGMATEPETLIPLVAFSKAEKVVLLGDHKQ 2661
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
L +V+++ G RSLFER + H+L+ QYRMH I FP+++FY ++
Sbjct: 2662 LRPVVKNEQLQNLGLDRSLFERY---HVDAHMLDTQYRMHEGICAFPSMEFYEKKLKTWQ 2718
Query: 688 NVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-------HSCRNIVEVSAVIKILQKL 740
++ ++ G E + F ++ G + + +S N EV+AV++I ++L
Sbjct: 2719 GLRRPPSILGHI-GKESCSVIFGHVQGHEQSLLVSTDEGNENSKANPEEVAAVVRIAKQL 2777
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
+ V+I ++PY AQ I K++ E G TV SI QG E +++
Sbjct: 2778 TLGRTVEPKDVAI--LTPYNAQAAEISKRL--VREGVSGVTVC--SITKSQGSEWRYVLV 2831
Query: 801 STVR-CNTGGS------------IGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
STVR C +GF+ P +VNVA+TRAR L ++G R L+S +W
Sbjct: 2832 STVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDHR-LLSCCPLW 2890
Query: 848 GALV--CDAK 855
+ C+A+
Sbjct: 2891 RRFLDFCEAQ 2900
Score = 164 (62.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 77/299 (25%), Positives = 136/299 (45%)
Query: 575 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQL-PAMV 632
+T S + +L V + ++IDEAAQ+ E E+ PL+ A VL GD Q+ P +
Sbjct: 893 TTTSQARELR-VPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHMQVTPRLF 951
Query: 633 ESKISDEAGFGR--SLFERLTSLNH-----SKHLLNIQYRMHPSISLFPNLQFYRNQILD 685
+ AG LF+ H S+ + + YR +I F + FY +
Sbjct: 952 SVPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHFY---VAK 1008
Query: 686 GANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAW 744
G+ + + + F ++ G E D S N EV+ V++ ++ L+ W
Sbjct: 1009 GSPIHASGRVPPH---PRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVEQVRDLHDGW 1065
Query: 745 V---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
G++++ I VVS + AQV A+R+ E ++ V V S + G E ++++S
Sbjct: 1066 PSCWGAREQKHICVVS-HGAQVTALRQ----ELRKRNLGQVSVGSFEILPGREFRVVVLS 1120
Query: 802 TVR-----CNTG-GSIGFISKPQRVNVALTRARHCLWILGSERTLISS---ESIWGALV 851
TV ++G S+GF + + +N +TRA+ + +G+ L SS +W + +
Sbjct: 1121 TVHNHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGACSKLWKSFI 1179
Score = 80 (33.2 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPTNVA 318
LI+GP GTGKT T++M L ++R + L CT TN A
Sbjct: 788 LIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTNSA 825
Score = 61 (26.5 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT 292
P TLN SQ A+ A L++ +I GPPGTGKT
Sbjct: 2417 PGGPHTLNRSQNRAVRAALKKQ-------FTVIQGPPGTGKT 2451
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 250 (93.1 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 111/394 (28%), Positives = 179/394 (45%)
Query: 469 PKSYISENSFQEMVALKSLLDSFGN-LLFQDNVVSKELEKLFSHSVDEGISWAFVRKRYL 527
P + +N ++++ L + GN V SK L ++ + + RK+
Sbjct: 539 PTNAAVDNMVEKLLHLGLNIVRVGNPARISSAVASKSLGEIVNSKL-ASFRAELERKKSD 597
Query: 528 LQLHQR---RSECLSV-LRNLWNSLDELNLPCTTSKLVLEDFCFKRASLFFSTASSSYKL 583
L+ R R + L+ +R L L + L + V E A + F+T +
Sbjct: 598 LRKDLRQCLRDDVLAAGIRQLLKQLGK-TLKKKEKETVKE--ILSNAQVVFATNIGAADP 654
Query: 584 HSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFG 643
++ + +VIDEA Q E IP+ L G +L GD CQL +V S+ + E G G
Sbjct: 655 LIRRLETFDLVVIDEAGQSIEPSCWIPI-LQG-KRCILSGDPCQLAPVVLSRKALEGGLG 712
Query: 644 RSLFERLTSLNHSKHL---LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSY-EKQYL 699
SL ER SL H L L QYRM+ I+ + + + Y + +V S + ++
Sbjct: 713 VSLLERAASL-HDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFV 771
Query: 700 TGTEFGTYSFI---------NIIGGREDFI----YHSCRNIVEVSAVIKILQKLYKAWVG 746
T + ++ G E+ + S N E V+ + L A V
Sbjct: 772 KATWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVS 831
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
++I V SPY AQV +R+++ ++ DG V+V +ID FQG E D +IIS VR N
Sbjct: 832 P---MAIAVQSPYVAQVQLLRERLD-DFPVADG--VEVATIDSFQGREADAVIISMVRSN 885
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTL 840
G++GF+ +R+NVA+TRAR + ++ T+
Sbjct: 886 NLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTI 919
Score = 85 (35.0 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKL 329
V ++ GPPGTGKT + ++ ++ R L PTN A+ + ++L L
Sbjct: 505 VMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNMVEKLLHL 554
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 236 (88.1 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 92/288 (31%), Positives = 149/288 (51%)
Query: 584 HSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
HS+ K ++ +IDEA+Q+ PLQLA VL+GD QLP +V++ + + G
Sbjct: 1051 HSIFNKRKFDYCIIDEASQIPLPICLGPLQLA--EKFVLVGDHYQLPPLVKNSRTSKDGL 1108
Query: 643 GRSLFERLTSLNHSKHL--LNIQYRMHPSI-SLFPNLQFYRNQILDGANVKSKSY--EKQ 697
SLF +L S H + + L +QYRM+ I SL L + N + + K K
Sbjct: 1109 SLSLF-KLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKA 1167
Query: 698 YLT-GTEFGTYS--FIN-IIGGREDFIYHSCRNIVEV-SAVIKILQKLYKAWV------- 745
+L+ G + S ++N +I I+ + +I+ V S IL+ +A++
Sbjct: 1168 HLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAVSS 1227
Query: 746 ----GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIII 800
G KQ SIG++S Y +QV + K N FT +++ ++D +QG ++DII+I
Sbjct: 1228 FLERGVKQS-SIGIISIYKSQVELLSK-------NLKSFTEIEINTVDRYQGRDKDIILI 1279
Query: 801 STVRCNTGGSIGFISKP-QRVNVALTRAR-HCLWILGSERTLISSESI 846
S VR N+ +G + + R+NVAL+RA+ C+ + GS TL SS +
Sbjct: 1280 SFVRSNSKNLVGELLRDWHRLNVALSRAKVKCI-MFGSLSTLSSSNIV 1326
Score = 101 (40.6 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTL 310
P F LNE Q+ A+ C H S LI G PGTGKT T+S L+ +LL K + L
Sbjct: 926 PEFLKCLNEDQITALKKCHA---AEHYS---LILGMPGTGKTTTISSLIRSLLAKKKKIL 979
Query: 311 ACTPTNVAITEL 322
+ T++A+ +
Sbjct: 980 LTSFTHLAVDNI 991
Score = 43 (20.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHS-VEIKPLN 592
+KL LE+F + AS S+ S K HS + IK N
Sbjct: 44 TKLKLENFAYN-ASTEISSPKISEKKHSSLPIKRKN 78
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 263 (97.6 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 93/325 (28%), Positives = 152/325 (46%)
Query: 565 FCFKRASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIG 623
F R + T S + S++I + +++DEA E E+ IPL Q VL+G
Sbjct: 2329 FELDRHEVILCTCSCAASA-SLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLG 2387
Query: 624 DECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQI 683
D QL +V+++ G RSLFER + H+L+ QYRMH I FP++ FY++++
Sbjct: 2388 DHKQLRPVVKNERLQNLGLDRSLFERY---HEDAHMLDTQYRMHEGICAFPSVAFYKSKL 2444
Query: 684 LDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIY-------HSCRNIVEVSAVIKI 736
++ + G E F ++ G + +S N+ EV+ V++I
Sbjct: 2445 KTWQGLRRPPSVLGH-AGKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRI 2503
Query: 737 LQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGGEE 795
++L Q I V++PY AQ I K + ++G V V SI QG E
Sbjct: 2504 TKQLTLGRTVEPQ--DIAVLTPYNAQASEISKAL-----RREGIAGVAVSSITKSQGSEW 2556
Query: 796 DIIIISTVR-CNTGGS------------IGFISKPQRVNVALTRARHCLWILGSERTLIS 842
+++STVR C +GF+ P +VNVA+TRA+ L ++G + L+
Sbjct: 2557 RYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIG-DHLLLR 2615
Query: 843 SESIWGALVCDAKARQCFFNADEER 867
+W +L+ +A+Q A + R
Sbjct: 2616 CCPLWRSLLDFCEAQQTLVPAGQVR 2640
Score = 152 (58.6 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 73/293 (24%), Positives = 135/293 (46%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 627
R + +T S + +L V + + ++IDEAAQ+ E E+ PL A VL GD Q
Sbjct: 640 RHRVVVTTTSQARELR-VPVGFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQ 698
Query: 628 L-P---AMVESKISDEAGFGRSL--FERLTS--LNHSKHLLNIQYRMHPSISLFPNLQFY 679
+ P ++ ++ ++ R +++ T S+ + + YR +I F + FY
Sbjct: 699 VTPRLFSVARARAAEHTLLHRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFY 758
Query: 680 RNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQ 738
+ G + ++ + F ++ G + D S N+ E++ V++ +Q
Sbjct: 759 ---VAKGNPIHARGKVPPH---PRHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQ 812
Query: 739 KLYKAWV---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
+ Y W G +++ I VVS + AQV A+R+ E +D V V S + G +
Sbjct: 813 EAYNTWPSCWGGREQRCICVVS-HGAQVSALRQ----ELRRRDLGQVSVGSFEILPGRQF 867
Query: 796 DIIIISTVR-CNT---GGSIG--FISKPQRVNVALTRARHCLWILGSERTLIS 842
++++STV C + G++ F + + +N LTRA+ L ++G L S
Sbjct: 868 RVVVLSTVHTCQSLLSPGALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCS 920
Score = 84 (34.6 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 275 GHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPTNVA 318
G R LI+GP GTGKT T++M L ++R + + L CT TN A
Sbjct: 534 GRRVPPLLIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSA 578
Score = 50 (22.7 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 282 LIWGPPGTGKT 292
+I GPPGTGKT
Sbjct: 2171 VIQGPPGTGKT 2181
Score = 46 (21.3 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 310 LACTPTNVAITELASRVLKLVK----ESYKRDSR-SNTPICPLGDILLFGNKDRL-KVNP 363
L C P+N ++ LA +L+ ++ Y + S P+ +G L R + N
Sbjct: 2217 LYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPREGRPNQ 2276
Query: 364 GFEEIYLNYRIKK 376
I L++RI++
Sbjct: 2277 SLRSITLHHRIRQ 2289
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 1339 VKDSPWQAFLKCLSQKMESE---YLQHPSESNNERELYVIQKLH-GALLD 1384
V+ + W+ L+ + + E +Q E++ REL +Q+ H G L+
Sbjct: 1823 VETALWKQLLELVELQRWPEAAALIQEKGEASQRRELVQVQRSHCGHFLE 1872
Score = 41 (19.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 515 EGISWAFVRKRYLLQLHQRRSECLSVLRNLW-NSLDEL 551
+G+ AF + L Q +QRR+ L + L LD+L
Sbjct: 1704 DGLCQAFSLQHALAQSYQRRARSLHLAVQLKAQPLDKL 1741
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 857 RQCFFNADEERNLAKARLEVSKELVEIGAESLT 889
R + DE +KA LE E+V I + LT
Sbjct: 2477 RSLLVSTDEGNENSKANLEEVAEVVRI-TKQLT 2508
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 1585 KSTDEIFGILYPKMEACQVQVGTSKDVPSKRP 1616
KS D + G+L +ME ++V + + S+ P
Sbjct: 2224 KSVDVLAGLLLRRMELKPLRVYSEQAEASEFP 2255
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(4) = 2.6e-14
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 114 WRNTI-SNSGKEPYKTLPGDI 133
WR + S G P LPG +
Sbjct: 1795 WRRRVYSAQGSSPPLPLPGTV 1815
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 261 (96.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 99/321 (30%), Positives = 149/321 (46%)
Query: 576 TASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESK 635
T SS+ K E+ ++IDE A E E+ IPL VL+GD Q+ +V+
Sbjct: 185 TCSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCG 244
Query: 636 ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-----VK 690
G +SLFER L ++L+ QYRMH I FP+ +FY ++ GA +
Sbjct: 245 HVKNKGMEKSLFERYMDL---ANMLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCLL 301
Query: 691 SKSYEKQYLTGTEFGTYSF--INIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSK 748
+KS E T FG ++++ E +S N E + + L K S
Sbjct: 302 NKSKEP---TAMLFGHIEGKEVSLVVSTEKGNENSMANTEEAEQAVCVADLLIKQSGVSP 358
Query: 749 QKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNT 807
+ ++I ++PY AQV I+ + E K+ V V ++ QG E +I+STVR C+T
Sbjct: 359 EHIAI--LTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCST 412
Query: 808 ---------------GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVC 852
G +GF++ +VNVA+TRA+ L ILG+ L E +W L+
Sbjct: 413 SDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLD 471
Query: 853 DAKARQCFFN-ADEERNLAKA 872
+ C N A + R AKA
Sbjct: 472 HYYRKSCVVNPASDIRVKAKA 492
Score = 50 (22.7 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 282 LIWGPPGTGKT 292
+I GPPGTGKT
Sbjct: 19 VIQGPPGTGKT 29
Score = 41 (19.5 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 310 LACTPTNVAITELASRVLKL 329
L C P+N ++ +A ++LKL
Sbjct: 68 LYCGPSNKSVDIVAEQLLKL 87
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 250 (93.1 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 98/330 (29%), Positives = 155/330 (46%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQ-LAGINHAVLIGD 624
+R S+ T S + S +K LN ++IDEA E E+ IPL + VL+GD
Sbjct: 2627 ERHSVILCTCSCAA---SGSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKVVLLGD 2683
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
QL +V+++ G RSLFER + +L+ QYRMH I FP+++FY ++
Sbjct: 2684 HKQLRPVVKNEQLRNLGMDRSLFERY---HRDAIMLDTQYRMHKDICSFPSMEFYGGKLK 2740
Query: 685 DGANVKSK----SYEKQYLTGTEFGTYSFIN--IIGGREDFIYHSCRNIVEVSAVIKILQ 738
+++K + + FG+ ++ E+ +S N EV+ V++I++
Sbjct: 2741 TWSDLKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRANPEEVTEVVRIIK 2800
Query: 739 KL-YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDI 797
+L V K + V++PY AQ AI + G G TV SI QG E
Sbjct: 2801 QLTLDRTVDPKD---VAVLTPYNAQAAAISR--GLMQRGVTGVTVT--SITKSQGSEWRY 2853
Query: 798 IIISTVR-CNTGGS------------IGFISKPQRVNVALTRARHCLWILGSERTLISSE 844
+I+STVR C +GF+ P +VNVA+TRA+ L I+G + L+
Sbjct: 2854 VIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIG-DHLLLRCC 2912
Query: 845 SIWGALVCDAKARQCFFNADEERNLAKARL 874
+W L+ +A+ A+ R K+ L
Sbjct: 2913 PLWHRLLGFCEAQNSLVPAERVRVQRKSAL 2942
Score = 176 (67.0 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 85/319 (26%), Positives = 141/319 (44%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQ 627
R L +T S + +L V + + IDEAAQ+ E E+ IPL A + VL GD Q
Sbjct: 885 RHRLVVTTTSQARELQ-VPAGFFSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDHMQ 943
Query: 628 LPAMVESKISDEAGFGRSLFERL---------TSLNHSKHLLNIQYRMHPSISLFPNLQF 678
+ + S D+A G L RL HS+ + + YR +I F + F
Sbjct: 944 VTPRLFSVPRDKAA-GHMLLHRLFLYYQQEVHKIAQHSRIVFHENYRSTAAIINFVSRHF 1002
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKIL 737
Y + G +++ ++ + F ++ G E D S N EV+ V++ +
Sbjct: 1003 Y---VAKGNPIQASGKVPRH---PQHYPLMFCHVAGSPEQDMSRTSWLNSAEVTQVVEKV 1056
Query: 738 QKLYKAWV---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGE 794
Q++Y W G +++ I VS + AQV A+R+ E ++ V V S + G E
Sbjct: 1057 QEIYNTWPHCWGPREQRHICAVS-HGAQVSALRQ----ELRRRNLGEVSVGSFEILPGRE 1111
Query: 795 EDIIIISTVRC-NTGGSIG-----FISKPQRVNVALTRARHCLWILGSERTLISS---ES 845
++++S+V N+ S G F ++P+ +N +TRA+ L +G L SS
Sbjct: 1112 FRVVVLSSVHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRK 1171
Query: 846 IWGALVCDAKARQCFFNAD 864
+W + + F D
Sbjct: 1172 LWKNFIRECIEHHSIFPED 1190
Score = 79 (32.9 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIK-CRT 309
PSF + ++A R H + LI+GP GTGKT T++M L +++ +
Sbjct: 756 PSFRGNHKQKLAVGLIAGRRPEGSKHIPPL-LIYGPFGTGKTYTLAMAALEVVQQPHTKV 814
Query: 310 LACTPTNVA 318
L CT TN A
Sbjct: 815 LICTHTNSA 823
Score = 53 (23.7 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 251 PSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT 292
P LN+SQ A+ + L++ +I GPPGTGKT
Sbjct: 2441 PGGHHKLNQSQDKAVRSALQKQ-------FTVIQGPPGTGKT 2475
Score = 39 (18.8 bits), Expect = 8.4e-14, Sum P(3) = 8.4e-14
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 200 NILPNKRIWNSLHMCGNWKVITQVLGT--DSVVDERCEL 236
NI PN W + + G+W ++ G VD+R E+
Sbjct: 2261 NIDPNTYTWVAHGLSGDWD--HELAGDWDQECVDDRQEV 2297
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 988 PLKQF--TQKEELLQKAKSLAKNDSNQFYEFVCAEANILSNDHSNLVMMNQQFIDSKRHQ 1045
PL F T+K LL K L N+ + + ++ H + +M++ Q+ + H+
Sbjct: 2668 PLVCFSKTEKVVLLGDHKQLRPVVKNEQLRNLGMDRSLFERYHRDAIMLDTQY---RMHK 2724
Query: 1046 NI 1047
+I
Sbjct: 2725 DI 2726
Score = 39 (18.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 509 FSHSVDEGISWAFVRKRYLLQL 530
F+ S +E + W F K L +L
Sbjct: 109 FASSPEEALVWTFELKNNLTRL 130
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 1033 MMNQQFIDSKRHQNIRGEILSSRMILDFHLHSNASTYHW 1071
++++Q D ++ + +RG +S +++ L HW
Sbjct: 2328 VLSKQLPDLRKEEAVRGLKNASPLVISIALGLPILEPHW 2366
Score = 37 (18.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 1249 DVKTLQKFVELSTEDFFRCIFPLDWRESLSKDMISLRQ 1286
+V TL+ + E S D ++P DW L+ D L++
Sbjct: 1274 EVSTLEGYEEDSESD----LWPSDWE--LNADDAILKE 1305
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 241 (89.9 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 90/295 (30%), Positives = 137/295 (46%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
++IDE A E ++ +PL VL+GD QL +V++ G RSLFER
Sbjct: 2493 ILIDECAMATEPQTLVPLVSFKPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMD- 2551
Query: 654 NHSKHLLNIQYRMHPSISLFPNLQFY----------RNQILDGANVKSKSYEKQYLTGTE 703
+L+ QYRMH I FP+ +Y R +L+ A + + K+ L G
Sbjct: 2552 --RAIMLDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLN-AETEGRRQSKRILFGDI 2608
Query: 704 FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
G + + R + +S N EV ++I +L VG + I ++SPY AQV
Sbjct: 2609 RGEEIGLVVSTARGN--ENSKANFDEVKKAVEICIQLVT--VGRVRPEDIAILSPYNAQV 2664
Query: 764 VAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNT------------GGS 810
IR+++ ++E K GFTV +I QG E +I+S VR C +
Sbjct: 2665 AQIRERLS-DFELK-GFTVT--TITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKH 2720
Query: 811 IGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
IGF+ ++NV +TRA+ L ILG++ L S + W L+ C AD+
Sbjct: 2721 IGFVGDENQINVGITRAQVGLCILGNQAVLNCSPA-WQKLLKHYSGHGCVVTADQ 2774
Score = 157 (60.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 88/336 (26%), Positives = 140/336 (41%)
Query: 572 LFFSTASSSYKLHSVEIKPLNF---LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQ 627
+ +T S + LH +++ P F ++IDEA+Q+ E E+ + L LA + VL GD Q
Sbjct: 660 IIITTTSIARHLHELKL-PKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQ 718
Query: 628 LPAMVESKISDEAGFGRSLFERL------TSLNHSKH---LLNIQYRMHPSISLFPNLQF 678
+ + S ++D+ +L RL S+N +K + N YR I F + F
Sbjct: 719 MAPKLFS-VTDDKRSEHTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYF 777
Query: 679 YRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQ 738
Y + DG + + L F + S N EV++V+ ++Q
Sbjct: 778 Y---VSDGIKARGDVHPHPRLKPLIF--HHVRGECHLSSTITSTSWLNYAEVNSVVNMVQ 832
Query: 739 KLYKAWV---GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEE 795
L W G K I V+S QV AIR K + V V+++ QG +
Sbjct: 833 VLLTDWPMEWGDKDPKQICVLSE-GQQVAAIR----IHLRRKGFYGVSVQNLANIQGKQF 887
Query: 796 DIIIISTVRCNT------GGSIGFISKPQRVNVALTRARHCLWILGSERTLI---SSESI 846
+III+TV F + +N ALTRA+ + ++G L +
Sbjct: 888 RVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGALCCFGKCSKV 947
Query: 847 WGALV--CDAKA--RQCFFNADEERNLAKARLEVSK 878
W A + C +K + F D L + LE+SK
Sbjct: 948 WRAYIEHCISKGSIKPDHFTRDV---LQREVLEISK 980
Score = 84 (34.6 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 61/251 (24%), Positives = 106/251 (42%)
Query: 153 TWTFVSVTTVPDDEDENKKENRYKVKARN----NMQVHD-KTKKSFFFIYLTNILPNKRI 207
TW +VTT+ D EN N++K+ N +M++ K ++F + +LP+ R
Sbjct: 2183 TWVAHAVTTLCSDSPENSG-NKFKIINFNVKYASMKIPKFKRNETFTVEIIPKLLPDIRK 2241
Query: 208 WNSLH-MCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAML 266
++++ + G +++ + +V++ V E+ P+ LNESQ A+
Sbjct: 2242 ESAVNNLKGANELVQNIALKHRIVNQSSNQ-DVPLYLLMREE-APAGLPQLNESQFKALE 2299
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLL--------TLLRIKCRT--------L 310
L +I GPPGTGKT + ++ L R+K T L
Sbjct: 2300 KALN-------GKFTIIQGPPGTGKTVVGAYIVYWFSQLNSRNLWRLKDPTDKDKREVIL 2352
Query: 311 ACTPTNVAITELASRVLKLVKES-----YKRDSRSNTPICPLGDILLFGNKDRL-KVNPG 364
C P+N ++ +A +LK ++ Y R P G L +K R + P
Sbjct: 2353 YCGPSNKSVDVVAEYLLKFGEKLKLLRVYSRQMEMQEYPYP-GSNLQLSHKSRQERSKPE 2411
Query: 365 FEEIYLNYRIK 375
I L++RI+
Sbjct: 2412 LRAITLHHRIR 2422
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 255 STLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL-RIKCRTLACT 313
S LN Q A+ L + + + LI+GP GTGKT ++ L R + + L CT
Sbjct: 529 SQLNNKQQIALNFILGKCEDDKVAAPLLIYGPFGTGKTLCLASAAKELAHRSQNKVLICT 588
Query: 314 PTN 316
TN
Sbjct: 589 YTN 591
Score = 43 (20.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 128 TLPGDILVLADFKPEKV 144
T P ++ L FKPEKV
Sbjct: 2502 TEPQTLVPLVSFKPEKV 2518
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 1532 DALRKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDA 1576
+A R IE N + HE+S+ + + K+C+ C D+
Sbjct: 1436 EAHRMIEELNIMFNHEVSKFLSEYTDT-------KSCTPLRCQDS 1473
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 240 (89.5 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 96/312 (30%), Positives = 146/312 (46%)
Query: 579 SSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVESK 635
SS S+E + ++IDE A E E+ IPL HA VL+GD QL +V +
Sbjct: 2258 SSASAGSLEKLNVKQILIDECAMSTEPETLIPL--VSHKHAEKVVLLGDHKQLKPVVNND 2315
Query: 636 ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN---VKSK 692
G SLFER +L+ QYRMH +I FP+ +FY +++ + S
Sbjct: 2316 FCKSLGMETSLFERYQK---QAWMLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSV 2372
Query: 693 SYEKQY-LTGTEFGTYSFI--NIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQ 749
Y K FG +++ E+ +S N EV ++ ++L G+ +
Sbjct: 2373 LYHKNNRCCPIIFGHVEGKEQSLVISTEEGNENSKANPEEVEQAVRTAKQL--TLDGTIR 2430
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVR-CN- 806
SI ++SPY AQV I K++ K+G V V +I QG E +I+STVR C+
Sbjct: 2431 PQSIAILSPYNAQVSEINKRL-----LKEGIRGVTVCTIMKSQGSEWRYVILSTVRSCSR 2485
Query: 807 -------TGG----SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAK 855
T +GF++ P +VNVA+TRA+ L I+G+ R L+ +W L+
Sbjct: 2486 HEIDKKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGN-RYLLECNPLWRRLLQHYI 2544
Query: 856 ARQCFFNADEER 867
C+ + E R
Sbjct: 2545 DHNCYTSGQEIR 2556
Score = 151 (58.2 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 73/269 (27%), Positives = 119/269 (44%)
Query: 594 LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS 652
++IDEAAQ+ E E+ IPL A VL GD Q+ + ++ + +L RL
Sbjct: 661 IMIDEAAQMLECEALIPLSYATFETRIVLAGDHMQITPKLFCVADGQSAY-HTLLNRLFQ 719
Query: 653 L-NHSKH--------LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
KH + N YR I F + FY I G + + + E
Sbjct: 720 FYQKEKHEVAMKSRIIFNENYRSTAGIIEFVSKHFY---IGKGNAIHASGNIPPH---PE 773
Query: 704 FGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWV---GSKQKVSIGVVSPY 759
F ++ G E D S N E++ V++ ++++Y+ W G++ + I VVS +
Sbjct: 774 IYPLMFCHVPGVAERDMSMISWHNASEITQVVEKVEEIYQRWPHEWGAQDQKRICVVS-H 832
Query: 760 TAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV------RCNTGGSIGF 813
QV AIR+ E K V V++ + G E +IIISTV R + + F
Sbjct: 833 GVQVSAIRQ----ELRKKQLPEVVVENYENLPGREFRVIIISTVHTSESLRVSASHNHEF 888
Query: 814 ISKPQRVNVALTRARHCLWILGSERTLIS 842
++ + +N +TRA+ + ++G L S
Sbjct: 889 FNEARVLNTIMTRAQSQVIVVGDAVALCS 917
Score = 84 (34.6 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPTNVA 318
LI+GP GTGKT T++M L ++R R L CT TN A
Sbjct: 538 LIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHTNSA 575
Score = 58 (25.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 38/148 (25%), Positives = 57/148 (38%)
Query: 153 TWTFVSVTT-VPDDE--DENKKE--NRY-KVKARNNMQVHDKTKKSFFFIYLT-NILPNK 205
TW +T DD D + K+ N Y + N+ + F + L +LP+
Sbjct: 1957 TWVAHGLTEEFADDHKSDRSSKQTLNFYINYMSMENVPAEISQASARFTVELIPKMLPDV 2016
Query: 206 RIWNSLHMCGNWKVITQVLGTDSVVDERCELCSVQRKGQWDEKFG-PSFSSTLNESQVGA 264
R N++ N + + + + L + K + F P LN SQ A
Sbjct: 2017 RKENAIWKLQNASDLAKSIALGHEPPSKA-LTVTKSKILQQKSFDLPGSQRKLNPSQNKA 2075
Query: 265 MLACLRRLDCGHRSGVELIWGPPGTGKT 292
+L L + LI GPPGTGKT
Sbjct: 2076 VLNALTK-------PFTLIQGPPGTGKT 2096
Score = 45 (20.9 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 1261 TEDFFRCIFPLDWRESL 1277
T+ +F+ +FPL+ RESL
Sbjct: 1670 TDRYFKALFPLN-RESL 1685
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 938 MEAANMAVLEGDIFLATDLLQKAWNFREASKLVLNFVF 975
ME+A+ AV E D + D+ + +W + SK L F
Sbjct: 1870 MESASCAVAENDSIILHDV-KISWANQRTSKGQLQGTF 1906
Score = 42 (19.8 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1791 KCVIQRCMVFVIGFHCFLLCIIFSRLK 1817
K ++ C + V HC+L CI LK
Sbjct: 1910 KSFLEECAIEVDFNHCYL-CIRLGGLK 1935
Score = 38 (18.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 306 KCRTLACTPTNVAITELASRVLKL 329
KC L C P+N ++ +A ++K+
Sbjct: 2131 KC-ILYCGPSNKSVDVVAEILMKM 2153
Score = 38 (18.4 bits), Expect = 4.1e-06, Sum P(4) = 4.1e-06
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 1592 GILYP-KMEACQV-QVGTSKDVPSKR-PASLPEDTDAQNMNDNTLVMNLD 1638
G + P + Q+ Q K+ +R P ED+D + + T MN D
Sbjct: 936 GSISPANLTMAQIKQAACDKESWCRRSPEGNDEDSDTDSWSSETESMNPD 985
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 250 (93.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 89/299 (29%), Positives = 140/299 (46%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+F ++DEA+Q+ + PL A + VL+GD QLP +V+S + E G SLF+RL
Sbjct: 758 DFCIVDEASQISQPICLGPLFFA--DRFVLVGDHQQLPPLVKSAEARELGMSESLFKRLE 815
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYR-----------NQILDGANVKSKSYEKQYLT 700
+ L +QYRM+ I N Y N ++ ++K+ E ++
Sbjct: 816 RNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRE 875
Query: 701 GTEF----------GTYSFINI--IGGREDFIYHSCRNIVEVSAVIKILQKLY-KAWVGS 747
E F+N I E N +E V L KLY KA G
Sbjct: 876 SQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFH-LTKLYLKA--GC 932
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT 807
+ IG+++PY Q+ K I + + V+V ++D +QG ++ +II+S VR N
Sbjct: 933 RPS-DIGIIAPYRQQL----KMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNI 987
Query: 808 GGSIGFISKP-QRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADE 865
G +G + K +R+NVALTRA+H L +LG TL + + L+C+ K ++ E
Sbjct: 988 DGKLGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCL-EQLICNLKTENQIYDLPE 1045
Score = 62 (26.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 646 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI---LLKLKK 692
Score = 37 (18.1 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 13/71 (18%), Positives = 28/71 (39%)
Query: 436 KGERKPFLKYVRERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLL 495
K + KP K + + C V+ R C+ H+ + Y + D +
Sbjct: 31 KSQDKPTRKIIPKTKLCKGVNNRYCVL----HIKEVYAQREEKHLTITASQEGDDLELCI 86
Query: 496 FQDNVVSKELE 506
+D+ V+ +++
Sbjct: 87 LKDDWVALQIK 97
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 253 (94.1 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 89/309 (28%), Positives = 151/309 (48%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPL-QLAGINHAVLIGDECQ 627
R L + ++S L V I+ + ++DEA E E+ IPL + + VL+GD Q
Sbjct: 2567 RVLLCTCSCAASASLRDVNIRQI---LVDEAGLASEPETLIPLVSFSQVEKVVLLGDHKQ 2623
Query: 628 LPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQIL--D 685
L +V+S+ G RSL +R +L++QY +H SI FP+++FY+ ++
Sbjct: 2624 LRPVVKSEQLQNLGLDRSLLQRY---RRDASMLDLQYCVHESICAFPSMEFYKKKLKTWQ 2680
Query: 686 GANVKSK--SYEKQYLTGTEFGTYSFI--NIIGGREDFIYHSCRNIVEVSAVIKILQKLY 741
G + Y K+ + FG +++ E+ +S N + + V+ + ++L
Sbjct: 2681 GLRLPPSILGYGKENCS-VIFGDVQSPEESLVVSTEEGRENSKVNKEQAALVVCLAKQLV 2739
Query: 742 KAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIIS 801
V K + +++PY AQV+ I K++ E G TV SI QG + +++S
Sbjct: 2740 SGRVDPKD---MAILTPYHAQVLEISKRL--EEARVAGVTVC--SITKSQGRQWRYVLVS 2792
Query: 802 TVR-CNTGG------------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
TVR C S+GF+ P +VNVALTRA+ LW++G +R L+ +W
Sbjct: 2793 TVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVG-DRLLLRCCPLWS 2851
Query: 849 ALV--CDAK 855
+ C+A+
Sbjct: 2852 RFLDFCEAQ 2860
Score = 68 (29.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIK-CRTLACTPTN 316
L+ GP GTGKT ++M L ++R + L CT TN
Sbjct: 785 LVCGPFGTGKTYALAMASLEVIRQPGTKVLICTHTN 820
Score = 50 (22.7 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 282 LIWGPPGTGKT 292
+I GPPGTGKT
Sbjct: 2403 VIHGPPGTGKT 2413
Score = 37 (18.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 509 FSHSVDEGISWAFVRKRYLLQL 530
F+ S +E + W F R+ + L
Sbjct: 109 FARSPEEALVWIFEREHNVSHL 130
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 238 (88.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 76/265 (28%), Positives = 133/265 (50%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFGRSLFERLTS 652
L+++EAA++ E+ I ++ + H V+IGD QL P ++ G S+FERL
Sbjct: 1464 LIVEEAAEVLEAH-IISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVE 1522
Query: 653 LNHSKHLLNIQYRMHPSIS-LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFIN 711
L Q+RM+ +IS L FY N + D NV + T F +++ +
Sbjct: 1523 RGLPFSQLRQQHRMNLTISDKIVKLSFYDN-VTDAENVGLYPDVQGMATNLFFWSHTSME 1581
Query: 712 IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIG 771
D + S N E+S + +++ L K + V V++ Y+AQ + ++
Sbjct: 1582 ---ESPDEV--SWLNKHEISMTVALVKHLLKQNYTTNDIV---VLATYSAQKNLMYREYA 1633
Query: 772 FEY-ENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG----SIGFISKPQRVNVALTR 826
+ D + V+++D FQG E I+I+S VR + GG IGF++ R+ VALTR
Sbjct: 1634 NVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTR 1693
Query: 827 ARHCLWILGSERTLISSESIWGALV 851
A+H ++I+G+ ++++ +W +V
Sbjct: 1694 AQHGMYIIGNGAYIMNNSELWNKIV 1718
Score = 75 (31.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTP------TNVAITELASRVLKLVKES 333
+ LI GPPGTGKT ++ T+L+ + P TN + L R+ ++++
Sbjct: 1056 LSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLERIYQMIEND 1115
Query: 334 YKRDSRSNTPICPLGDILLFGNK---DRLK-VNPGFEEIYLNYRIK 375
+ + P I+ FG+K + LK N +++Y Y+ K
Sbjct: 1116 EELSKDNGRP-----KIIRFGSKCDSNYLKRQNVMRQDVYEQYKSK 1156
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 210 (79.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 80/267 (29%), Positives = 128/267 (47%)
Query: 594 LVIDEAAQLKESESTIPLQLAGIN-----HAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ IDEA E E+ I + GI H +L GD QL A+++S + G RSL E
Sbjct: 474 IFIDEAGASTEPEALIGIM--GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLME 531
Query: 649 RLTSL---------NHSKHL---LNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK 696
RL N+ ++ L YR HP I N +Y ++ A +
Sbjct: 532 RLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAA 591
Query: 697 QY--LTGTEFGT-YSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
+ LT +F + + + RE S N+ E + +++L V ++ V
Sbjct: 592 NWSVLTNPQFPIIFQATHGVTNREQNSTSSYNNL-EAEVICWYVKRLINDRVVGQEDV-- 648
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGF 813
G+V+PYTAQ + K + ++K V+V S++ +QG E+ III S V+ T ++GF
Sbjct: 649 GIVAPYTAQGKLVTKLL----QSKGYPNVEVGSVETYQGREKTIIIASLVKSFT--NMGF 702
Query: 814 ISKPQRVNVALTRARHCLWILGSERTL 840
+ P+RVNV L+RA+ L ++G+ TL
Sbjct: 703 MCNPRRVNVLLSRAKALLILVGNPVTL 729
Score = 91 (37.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 242 KGQWDEKFGPSFSSTLNES--QVGAMLACLRRLDCGHRS-GVELIWGPPGTGKTKTV--S 296
+G+ E P+ S LN + L ++R+ G + G +++GPPGTGKT T+ +
Sbjct: 290 QGRPQEPATPTSLSLLNSTIYSNAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEA 349
Query: 297 MLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYK 335
+L L L + + R L +N A +A ++ + ++ + +
Sbjct: 350 ILQLRLQQPQSRILVTAGSNSACDTIALKLCEYIESNIR 388
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 156 (60.0 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 64/222 (28%), Positives = 103/222 (46%)
Query: 659 LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGRED 718
L+N YR H ++ P+ FY ++ A+ S + G + + G+E
Sbjct: 975 LVN-NYRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFHGVRGKET 1033
Query: 719 FIYHSCR--NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYEN 776
HS N E V++ L K + IGV++PY QV +KI F +
Sbjct: 1034 REGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQV----EKIKFLLRS 1089
Query: 777 KDGFTVKVKSIDGFQGGEEDIIIISTVRC--NTGGS----IGFISKPQRVNVALTRARHC 830
D +KV +++ FQG E + I+STVR +T +GF+S P+R NVA+TRA+
Sbjct: 1090 IDLSDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKAL 1149
Query: 831 LWILGSERTLISSESIWGALVCDAKARQCFFNAD---EERNL 869
L ++G+ L+ + + AL+ + + D E RNL
Sbjct: 1150 LIVIGNPHLLVK-DPCFCALLEYSLMNNAYIGCDLPSELRNL 1190
Score = 108 (43.1 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 572 LFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAG-IN-HAVLIGDECQ 627
+ +T SS+ + + +F +++DEA Q E ES IP+ L +N VL+GD Q
Sbjct: 866 IIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQ 925
Query: 628 LPAMVESKISDEAGFGRSLFERLTS 652
L +++S+I+ G SL ERL S
Sbjct: 926 LGPLIKSRIAVAFGLNISLLERLIS 950
Score = 93 (37.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 35/105 (33%), Positives = 50/105 (47%)
Query: 222 QVLGTDSVVD--ERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSG 279
Q+ D+V E +L +W + G F+ LN+ Q LA R L R
Sbjct: 717 QINTADAVTASVETSQLVEETETIKW--RAGEFFNPMLNKQQ---KLAVKRILSGECRPT 771
Query: 280 VELIWGPPGTGKTKTV--SMLLLTLLRIKCRTLACTPTNVAITEL 322
+++GPPGTGKT TV ++L + R L C P+N A T+L
Sbjct: 772 PYILFGPPGTGKTITVVEAILQIHFTLPDSRILVCAPSNAA-TDL 815
Score = 37 (18.1 bits), Expect = 9.3e-11, Sum P(3) = 9.3e-11
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 366 EEIYLNYRIKKLREC 380
EEIY IKK C
Sbjct: 477 EEIYQEMEIKKFDMC 491
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 223 (83.6 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 82/281 (29%), Positives = 132/281 (46%)
Query: 575 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVE 633
+T + Y+ I P I+EAA + E IP + VLIGD QL P
Sbjct: 690 TTGLNKYRDILERINP-KICFIEEAADVLEGP-IIPAVFPSLEQLVLIGDHKQLRPGCST 747
Query: 634 SKI-SDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSI-----SLFPNLQFYRNQILD-G 686
+ D S+FERL + L +Q RMHP I S++ +L Y +I
Sbjct: 748 YALRQDPFNLSISMFERLVENDMEYTRLTMQRRMHPQIRRLVSSVYEDLSDY--EITKYW 805
Query: 687 ANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
++ +++ F T+S I G + S N+ E +++ L V
Sbjct: 806 PSIPGMGEIRRF-----FLTHSRIEDNDG-----FASKINLFEAQMLVQFAVYLINNGV- 854
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
QK++ ++ Y AQ I + + E N++ +KV ++DG+QG E D++++S VR N
Sbjct: 855 EPQKITC--LTFYAAQKDLIERLLS-ESLNREKHFIKVATVDGYQGEENDVVLLSLVRNN 911
Query: 807 TGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
+GF+S P RV V+L+RAR L+I G+ + + S +W
Sbjct: 912 DRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQLVAESNPLW 952
Score = 79 (32.9 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 38/137 (27%), Positives = 59/137 (43%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLR-- 304
E FGP L+ SQ+ A + L + + +I GPPGTGK+ + TLL
Sbjct: 363 EPFGPG-EYILDSSQLKAYQSMLTKR-------LSIIQGPPGTGKSFVTLKAIETLLENT 414
Query: 305 ---IKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV 361
+ +AC TN A+ ++ R+L + SR+ P + + +F K
Sbjct: 415 HSHVLPILVACQ-TNHAVDQILIRLLHQGASVMRLGSRTKDP--EIAAVTIFQKAKHTKH 471
Query: 362 NPGFEEIYLNYRIKKLR 378
+ F+ Y R KK R
Sbjct: 472 S--FKAAYNEIRHKKQR 486
Score = 50 (22.7 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 480 EMVALKSLLDSFGNLLFQDNVVSKELEKLFSHS---VDEGISWAFV--RKRYLLQ----L 530
E++ + D F L D +E++K S ++E + F+ R +YL L
Sbjct: 554 ELITPSEITDGFEEELQIDPEKLEEIQKEAEDSGALMEEELRGKFINLRCKYLFSKLTTL 613
Query: 531 HQRRSECLSVLRNLWN 546
H++ + L + N+W+
Sbjct: 614 HEKEIDTLLTIPNIWD 629
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 180 (68.4 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 79/256 (30%), Positives = 122/256 (47%)
Query: 656 SKHLLNIQYRMHPSI-SLFPNLQFYRNQILDGANVK--------SKS---YEKQYLTGTE 703
+K L N YR PSI S++ L FY ++++ + K SK +E +
Sbjct: 1028 TKLLYN--YRALPSIMSIYSRL-FYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQA 1084
Query: 704 FGTYSFINIIG-GREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
GT+ F IIG R++ S N EV V + LY+A V + Q IG+++PY Q
Sbjct: 1085 HGTF-FYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ---IGIITPYQKQ 1140
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN-------TGGSIGFIS 815
V +R + D K+ S++ FQG E DII+ISTVR + S+GF+
Sbjct: 1141 VKMLRSM----FIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVR 1196
Query: 816 KPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLE 875
+R+NVA++RAR + I G+ L++ + W L+ +F D + + + E
Sbjct: 1197 CSKRLNVAVSRARAMMIIFGNPH-LLAVDECWRQLILFCVKNNAYFGCDLPQMVINQKDE 1255
Query: 876 VSKELVEIGAESLTST 891
V L E SL +T
Sbjct: 1256 VPVCL-ETFVPSLNTT 1270
Score = 92 (37.4 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHA--VLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
++ DEA Q E E+ +P+ + + VL GD QL ++V S+I+ + GF S ERL
Sbjct: 945 VLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERL- 1003
Query: 652 SLNHSKHLLNIQ 663
L S + ++Q
Sbjct: 1004 -LERSPYRKDLQ 1014
Score = 83 (34.3 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVE-LIWGPPGTGKTKTVSMLLLTLLRIK--CRT 309
++ +LN Q A+ LR G + +++GPPG+GKT T+ LL L+R R
Sbjct: 780 YNQSLNSIQKRAVFNILR----GEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARI 835
Query: 310 LACTPTNVAITELASRVL 327
L TP+N + + R++
Sbjct: 836 LVGTPSNSSADLVTKRLI 853
Score = 43 (20.2 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 65/290 (22%), Positives = 113/290 (38%)
Query: 394 MIDLLEDCVSQYHIY-------VEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYV 446
++DL CV +Y + V K+K + + + +KE K + K E+ F
Sbjct: 194 ILDLHVGCVVEYLTFTTGEAMRVVKVKSILEHSWEDTSQKEIEKAVDNLKNEKPTFFN-T 252
Query: 447 RERFKCAVVSLRNCIFIFC-THLPKSYISENSFQEMVALKSLLDSFG---NLLFQDNVVS 502
R ++S R I T + + ++ EM + + D N+ D V
Sbjct: 253 ETRSVLGLISQRLASSIDVETEYGQLTVELDNI-EMNFIPTNGDRVRLECNIQLDDGFVD 311
Query: 503 K-----ELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTT 557
K E+ KLF + EG V + Y+ H V+ + + +LP T
Sbjct: 312 KQGEILEVTKLFPTRIQEGEK-CIVERVYV---HM-------VVLGPETYILKTDLP-TG 359
Query: 558 SKLVLEDFCFKRASLFFSTASSSYKLHSVEIKPL--NF--LVIDEAAQLKESESTIPLQL 613
+ L L D A L S + +++I PL NF + + + + S S + +
Sbjct: 360 TDLHLGDIVL--ADLI-ECQYSKFTRRAIKITPLEKNFGATKLTQQSSMGSSGSGKAVTV 416
Query: 614 AGINHAVLIGDECQLPAMVESKISDEAGFGRSL-FERLTSLNHSKHLLNI 662
G+N I E V K+++ R+L E +T N S+ L++
Sbjct: 417 TGVNR--FITAELWQKESVSLKLTNN--LNRTLRLESITVCNDSESQLSV 462
Score = 42 (19.8 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 503 KELEKLFSHSVDEGISWAFVRKRYLLQLHQRRSECLSVLRN 543
K +E+ +S + E +S R+ L LH EC RN
Sbjct: 598 KAIEQHYSF-LTEPLSIKTYMHRFRLLLHLEEIECFVNFRN 637
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 32 FSWS-LEDIFSQSFFKDQVEKIPES 55
FS S LE + +S ++ +++ PES
Sbjct: 995 FSISFLERLLERSPYRKDLQRFPES 1019
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 211 (79.3 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 66/202 (32%), Positives = 105/202 (51%)
Query: 664 YRMHPSISLFPNLQFYRNQILDGAN-VKSKSY-EKQYLTGTEFGTYSFINIIGGRE-DFI 720
YR HPSI PN FY N++ A+ + S+ Y ++L F F ++G E +
Sbjct: 754 YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGFPVI-FHGVVGKDEREST 812
Query: 721 YHSCRNIVEVSAVIKILQKLY----KAWVGSKQKVSIGVVSPYTAQVVAIRK--KIGFEY 774
S N E+ ++ L+KL K + IG+++PY QV IR+ KI E
Sbjct: 813 SPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKIHREL 872
Query: 775 ENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTGG-------SIGFISKPQRVNVALTR 826
++ G +KV S++ FQG E +II+STVR + +IGF+ +R NVA+TR
Sbjct: 873 KSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTR 932
Query: 827 ARHCLWILGSERTLISSESIWG 848
A+ L ++G+ ++ ++ IWG
Sbjct: 933 AKALLIMVGNP-IILRTDEIWG 953
Score = 127 (49.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 56/198 (28%), Positives = 93/198 (46%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHA-----VLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ +DEA E E I + +AG+ +A VL GD QL ++ S + + G G SL E
Sbjct: 669 IFVDEAGHAVEPE--IVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLLE 726
Query: 649 RLTSLNH----------SKHLLNI--QYRMHPSISLFPNLQFYRNQILDGAN-VKSKSY- 694
RL + N ++++ + YR HPSI PN FY N++ A+ + S+ Y
Sbjct: 727 RLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADEISSRQYC 786
Query: 695 EKQYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSI 753
++L F F ++G E + S N E+ ++ L+KL ++ K I
Sbjct: 787 TWEHLPKRGFPVI-FHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLL----TQAKKGI 841
Query: 754 GVVSPYTAQVVA-IRKKI 770
+SP ++A RK++
Sbjct: 842 AKISPKDIGIIAPYRKQV 859
Score = 86 (35.3 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIK--CRTLACTPTNVAITELASRVL 327
L++GPPGTGKT T+ + + + R LAC P+N A +L +++
Sbjct: 547 LVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSNSAADQLGEKLI 594
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 151 (58.2 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI E ++ + KA G K IG+++PY Q+ I + F + V+V
Sbjct: 492 NITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQLKIINDLL-FHSSIR---MVEVN 544
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ II++S VR N G IG + K +R+NVA+TRA+H L +LG
Sbjct: 545 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLG 595
Score = 122 (48.0 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 333 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 390
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 391 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 430
Score = 65 (27.9 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSN 341
LI G PGTGKT T+ L+ L L + T+ A+ + ++ K K + R R+
Sbjct: 224 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKF-KIGFLRLGRTQ 282
Query: 342 TPICPLGDILLFGNKDRLKVNPG-----FEEIYLNYRI 374
DI F ++ + P EE+Y ++RI
Sbjct: 283 KVH---QDIQKFTEEEICRSKPIKSLALLEELYNSHRI 317
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK ++ CG+ KV V+ ++ D + EL
Sbjct: 415 LSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLEL 449
Score = 40 (19.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 718 DFIYHSCRNIVEVSAVIK 735
D ++HS +VEV+ V K
Sbjct: 531 DLLFHSSIRMVEVNTVDK 548
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 157 (60.3 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 39/111 (35%), Positives = 66/111 (59%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI+E V+ + KA G K IG+++PY Q+ I + ++ G V+V
Sbjct: 913 NIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQLKVISDLLA---QSSVGM-VEVN 965
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ I+++S VR N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 966 TVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLG 1016
Score = 125 (49.1 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 811
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 812 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 851
Score = 64 (27.6 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI---LLKLAK 691
Score = 41 (19.5 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
++HP I F + R++ + + + Y Q + T
Sbjct: 704 KVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVAT 741
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK + CG+ KV V+ + D + EL
Sbjct: 836 LSNKLTYEGKLECGSDKVANAVINLPNFKDVKLEL 870
Score = 37 (18.1 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 398 LEDCVSQYHIYVEKLKEREDCNVNQSEEKE 427
L++ SQ + LKE +NQ E K+
Sbjct: 180 LQELASQTIQEIRHLKEMYRLKLNQDEIKQ 209
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 230 (86.0 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 89/332 (26%), Positives = 161/332 (48%)
Query: 525 RYLLQLHQR--RSECLSVLRNLWNSLDEL-NLPCTTSKLVLEDFCFKRASLFFSTASSSY 581
R LQL+Q R + LS R S + + L +L+D + +T ++ Y
Sbjct: 935 RLWLQLYQADTRRKILSYERQYRTSAERMAELRLQEDLHILKD---AQVVGMTTTGAAKY 991
Query: 582 KLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEA 640
+ +++P ++++EAA++ E+ + L A H +LIGD QL P+ ++
Sbjct: 992 RQILQKVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPSANVYDLAKNF 1049
Query: 641 GFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLT 700
SLFERL +N LN Q+RM P I+ Y++ L+ K YEK +
Sbjct: 1050 NLEVSLFERLVKVNIPFVRLNYQHRMCPEIARLLTPHIYQD--LENHPSVLK-YEK--IK 1104
Query: 701 GTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQK-LYKAWVGSKQKVSIGVVSPY 759
G + + +E S +N E V+++ + L + ++ S+ I +++ Y
Sbjct: 1105 GVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLCQEYLPSQ----ITILTTY 1160
Query: 760 TAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQR 819
T Q+ +RK + K V+V +D +QG E DII++S VR N G +GF+ R
Sbjct: 1161 TGQLFCLRKLM----PAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNR 1216
Query: 820 VNVALTRARHCLWILGSERTLISSESIWGALV 851
+ VAL+RA+ ++ +G+ + +++ +W ++
Sbjct: 1217 ICVALSRAKKGMYCIGNMQ-MLAKVPLWSKII 1247
Score = 69 (29.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 39/130 (30%), Positives = 55/130 (42%)
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT----KTVSML 298
GQW K + L++SQ+ A+ L R + +I GPPGTGKT K V L
Sbjct: 588 GQWPSKE----ALKLDDSQMEALQFALTR-------ELAIIQGPPGTGKTYVGLKIVQAL 636
Query: 299 LL--TLLRI---KCRTLACTPTNVAITELASRVLKLVKESYKR-DSRSNTPICPLGDILL 352
L ++ +I K L TN A+ + + K S R RSN+ I +
Sbjct: 637 LTNESVWQISLQKFPILVVCYTNHALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRE 696
Query: 353 FGNKDRLKVN 362
NK + N
Sbjct: 697 LRNKREFRRN 706
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 157 (60.3 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 39/111 (35%), Positives = 66/111 (59%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI+E V+ + KA G K IG+++PY Q+ I + ++ G V+V
Sbjct: 989 NIMEAKLVVFLTSVFIKA--GCKPS-DIGIIAPYRQQLKVISDLLA---QSSVGM-VEVN 1041
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ I+++S VR N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 1042 TVDRYQGRDKSIVVVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLG 1092
Score = 125 (49.1 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 830 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 887
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 888 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 927
Score = 64 (27.6 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 721 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI---LLKLAK 767
Score = 41 (19.5 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 665 RMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
++HP I F + R++ + + + Y Q + T
Sbjct: 780 KVHPDIQKFTEEEICRSKSIKSLALLEELYNSQLIVAT 817
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK + CG+ KV V+ + D + EL
Sbjct: 912 LSNKLTYEGKLECGSDKVANAVINLPNFKDVKLEL 946
Score = 37 (18.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 398 LEDCVSQYHIYVEKLKEREDCNVNQSEEKE 427
L++ SQ + LKE +NQ E K+
Sbjct: 256 LQELASQTIQEIRHLKEMYRLKLNQDEIKQ 285
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 187 (70.9 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 84/271 (30%), Positives = 121/271 (44%)
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERL--TSL--------NH---SKHLLNIQYRM 666
VL GD QL +V+S+++ G G SL ERL SL N +K L N YR
Sbjct: 839 VLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYN--YRS 896
Query: 667 HPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG-REDFIYHSCR 725
H ++ P+ FY ++ A ++ + T F I G R + C
Sbjct: 897 HEALLDLPSRLFYAGELCVRAQ---RAAVDSLCHWNKLPTRGFPLIFHGVRGSEMREGCN 953
Query: 726 ----NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF- 780
N E V+ +L K IGV++PY QV IR + + G
Sbjct: 954 PSWFNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLG 1008
Query: 781 TVKVKSIDGFQGGEEDIIIISTVRCNTG-------GSIGFISKPQRVNVALTRARHCLWI 833
VKV S++ FQG E I+I+STVR N +GF+S P+R NVA+TRA+ L +
Sbjct: 1009 EVKVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLIV 1068
Query: 834 LGSERTLISSESIWGALVCDAKARQCFFNAD 864
+G+ LI E + AL+ + + F D
Sbjct: 1069 IGNPHVLIK-EPCFSALLQYSYDNRAFIGCD 1098
Score = 169 (64.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 79/255 (30%), Positives = 113/255 (44%)
Query: 575 STASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAG--INHAVLIGDECQLPA 630
ST SS+ + + ++ +F + +DEA Q E E+ IPL L VL GD QL
Sbjct: 790 STCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGP 849
Query: 631 MVESKISDEAGFGRSLFERL--TSL--------NH---SKHLLNIQYRMHPSISLFPNLQ 677
+V+S+++ G G SL ERL SL N +K L N YR H ++ P+
Sbjct: 850 VVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYN--YRSHEALLDLPSRL 907
Query: 678 FYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGG-REDFIYHSCR----NIVEVSA 732
FY ++ A ++ + T F I G R + C N E
Sbjct: 908 FYAGELCVRAQ---RAAVDSLCHWNKLPTRGFPLIFHGVRGSEMREGCNPSWFNPAEAVQ 964
Query: 733 VIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF-TVKVKSIDGFQ 791
V+ +L K IGV++PY QV IR + + G VKV S++ FQ
Sbjct: 965 VMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLL-----QRVGLGEVKVGSVEEFQ 1019
Query: 792 GGEEDIIIISTVRCN 806
G E I+I+STVR N
Sbjct: 1020 GQEFLIMILSTVRSN 1034
Score = 105 (42.0 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 250 GPSFSSTLNESQVGAMLACLRRLDCGH-RSGVELIWGPPGTGKTKT-VSMLLLTLLRIKC 307
G F+ LN +Q A+ RR+ G R +++GPPGTGKT T + +L RI C
Sbjct: 666 GQFFNPDLNAAQKQAV----RRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISC 721
Query: 308 -RTLACTPTNVAITELASRV 326
R L CTP+N A + R+
Sbjct: 722 SRVLVCTPSNSAADLICMRL 741
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 352 LFGNKDRLKVNPGFEEIYLNYRIKKLRECFAPLSGWRHCFSSMIDLLEDCVSQYHIYVEK 411
+F N D L V PGF + + E L WR + + C Q +
Sbjct: 203 VFFNLDSLIVPPGFRPTRGDLVNLVVLESSQSLYSWRALCMTPLQRSAQCSEQKEPDADL 262
Query: 412 ---LKEREDCNVNQSEEKEC 428
L+E+ V+Q + C
Sbjct: 263 QALLQEKGGLQVSQQNQSVC 282
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 224 (83.9 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 79/275 (28%), Positives = 130/275 (47%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHKQLPPLVLNREARALGMSESLFK 811
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG----AN----------VKSKSY 694
RL + L IQYRM+ I N Y ++ G AN V+ + Y
Sbjct: 812 RLERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 695 ----EKQYLTGT--EFGTYSFINI--IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG 746
+ +L G F+N + E N+ E ++ + KA G
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKA--G 929
Query: 747 SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCN 806
IG+++PY Q+ I + + G V+V ++D +QG ++ +I++S VR N
Sbjct: 930 CSPS-DIGIIAPYRQQLRTITDLLA---RSSVGM-VEVNTVDKYQGRDKSLILVSFVRSN 984
Query: 807 TGGSIGFISKP-QRVNVALTRARHCLWILGSERTL 840
G++G + K +R+NVA+TRA+H L +LGS +L
Sbjct: 985 EDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSL 1019
Score = 63 (27.2 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 645 LIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNI---LLKLAK 691
Score = 61 (26.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 23/102 (22%), Positives = 51/102 (50%)
Query: 473 ISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSH-SVDEGISWAFVRKRYLL-QL 530
+ E+S E V +L + F + V+S+ ++ + +V+ ++ +++LL +
Sbjct: 12 LEEDSGAEAVPRMEILQKKADAFFAETVLSRGVDNRYLVLAVETKLNERGAEEKHLLITV 71
Query: 531 HQR-RSECLSVLRNLWNSL-----DELNLP--CTTSKLVLED 564
Q E L +LRN W+S+ D +++ CT+ +++D
Sbjct: 72 SQEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWIVDD 113
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 153 (58.9 bits), Expect = 8.9e-15, Sum P(3) = 8.9e-15
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 782 VKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLI 841
+K+ +ID +QG E DI+I + R N G IGF+S PQR+NV L+RAR L ++G+ T
Sbjct: 960 IKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNTFT 1019
Query: 842 SS---ESIW 847
+S + +W
Sbjct: 1020 NSRKGKEVW 1028
Score = 136 (52.9 bits), Expect = 8.9e-15, Sum P(3) = 8.9e-15
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVESKISDEAGFG----RSLFE 648
++++EA ++ ES L + ++IGD QL P + +S E G G RSLFE
Sbjct: 745 VLLEEAGEILESHVLTALG-SHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFE 803
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYS 708
RL + L Q+RM P IS Y + +LDG K++ + F +S
Sbjct: 804 RLVESGYPHSTLAKQHRMAPEISALVRRLTYPD-LLDGDKTKTRLAPRGLQNRVVFIDHS 862
Query: 709 ----FINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQV 763
F++ + R+ D S +N EV V+KI++ L + G+ + V +++PY Q+
Sbjct: 863 QPEGFLHGVSDRDGDGGKGSKQNTFEVKLVLKIVKYLGQQGYGTDKLV---ILTPYLGQL 919
Query: 764 VAIRKKI 770
+R+++
Sbjct: 920 HLLREEL 926
Score = 61 (26.5 bits), Expect = 8.9e-15, Sum P(3) = 8.9e-15
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 280 VELIWGPPGTGKTKTVSMLLLTLLRIKCRT-LACTPTNVAITELASRVLKL-VKES 333
V LI GPPGTGK+ +++ L + T L TN A+ + ++ + + ES
Sbjct: 478 VSLIQGPPGTGKSFVGALIAKALYKHSKETILVMCYTNHALDQFLEDLMDIGIDES 533
Score = 38 (18.4 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 526 YLLQLHQRRSECLSVLRNLWNSLDELNL 553
YL QLH R E + N LD +L
Sbjct: 915 YLGQLHLLREELRKDTDPVLNDLDSYDL 942
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 151 (58.2 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI E ++ + KA G K IG+++PY Q+ I + F + V+V
Sbjct: 881 NITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQLKIINDLL-FHSSIR---MVEVN 933
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ II++S VR N G IG + K +R+NVA+TRA+H L +LG
Sbjct: 934 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLG 984
Score = 122 (48.0 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 722 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 779
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 780 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 819
Score = 65 (27.9 bits), Expect = 9.8e-15, Sum P(3) = 9.8e-15
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSN 341
LI G PGTGKT T+ L+ L L + T+ A+ + ++ K K + R R+
Sbjct: 613 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKF-KIGFLRLGRTQ 671
Query: 342 TPICPLGDILLFGNKDRLKVNPG-----FEEIYLNYRI 374
DI F ++ + P EE+Y ++RI
Sbjct: 672 KVH---QDIQKFTEEEICRSKPIKSLALLEELYNSHRI 706
Score = 43 (20.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK ++ CG+ KV V+ ++ D + EL
Sbjct: 804 LSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLEL 838
Score = 38 (18.4 bits), Expect = 5.4e-12, Sum P(3) = 5.4e-12
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 409 VEKLKEREDCNVNQSEEKE 427
+ LKE N+NQ E K+
Sbjct: 163 IRHLKEMYRLNLNQEEVKQ 181
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 151 (58.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI E ++ + KA G K IG+++PY Q+ I + F + V+V
Sbjct: 912 NITEAKLIVFLTSVFIKA--GCKPS-DIGIIAPYRQQLKIINDLL-FHSSIR---MVEVN 964
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ II++S VR N G IG + K +R+NVA+TRA+H L +LG
Sbjct: 965 TVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKLILLG 1015
Score = 122 (48.0 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 753 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 810
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 811 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSD 850
Score = 65 (27.9 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSN 341
LI G PGTGKT T+ L+ L L + T+ A+ + ++ K K + R R+
Sbjct: 644 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKF-KIGFLRLGRTQ 702
Query: 342 TPICPLGDILLFGNKDRLKVNPG-----FEEIYLNYRI 374
DI F ++ + P EE+Y ++RI
Sbjct: 703 KVH---QDIQKFTEEEICRSKPIKSLALLEELYNSHRI 737
Score = 43 (20.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK ++ CG+ KV V+ ++ D + EL
Sbjct: 835 LSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLEL 869
Score = 38 (18.4 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 409 VEKLKEREDCNVNQSEEKE 427
+ LKE N+NQ E K+
Sbjct: 189 IRHLKEMYRLNLNQEEVKQ 207
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 211 (79.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 87/288 (30%), Positives = 132/288 (45%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLAGINHA---- 619
K A + T++ + + EI L F +V++EAAQ+ E ES IP L +
Sbjct: 1034 KEARIIAMTSTHA-AMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTALQNMKEGQLPL 1092
Query: 620 ---VLIGDECQLPAMVES-KISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
VL GD Q ++++ A F +SLF RL L L+ Q R PSI+
Sbjct: 1093 KRIVLCGDHLQNSPIIQNLAFRQYAHFEQSLFLRLIRLGVPAITLDQQGRARPSIA---E 1149
Query: 676 LQFYRNQILDGANVKSKSYE-KQYLTGTEFGTYSFINI-----IGGREDFIYHSCRNIVE 729
L +R Q L + ++ E KQ G +F Y FIN+ G RE H +N+ E
Sbjct: 1150 LFRWRYQNLGNLPIVEQAPEFKQANAGFQF-EYQFINVPDYQGTGEREP-TPHFVQNLGE 1207
Query: 730 VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVK--VKSI 787
+ I Q Y +G I +++ Y Q I+ + F + V ++
Sbjct: 1208 AEYAVAIFQ--YMRLLGYPAS-KISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTV 1264
Query: 788 DGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
D +QG + D II+S R T +G++ +R+ VAL+RAR L+ILG
Sbjct: 1265 DRYQGEQNDYIILSLTRTRT---VGYLRDVRRLTVALSRARLGLYILG 1309
Score = 78 (32.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 267 ACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELAS 324
A ++ + G + G+ +I GPPGTGKT + ++ + RTL +N A+ +L
Sbjct: 811 AQIQAIASGTQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLLVAHSNQALNQLFQ 870
Query: 325 RVLKL 329
+++ L
Sbjct: 871 KIVAL 875
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 158 (60.7 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 61/198 (30%), Positives = 90/198 (45%)
Query: 664 YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKQYLTGTEFGTYSFINIIGGREDF 719
YR H ++ P+ FY ++ D V S +EK G + + RE
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPL-VFHGVRGTEAREGR 1028
Query: 720 IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDG 779
S N E V++ L ++ IGV++PY QV +KI N
Sbjct: 1029 S-PSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQV----EKIKILLRNVGL 1083
Query: 780 FTVKVKSIDGFQGGEEDIIIISTVRCNTGGS------IGFISKPQRVNVALTRARHCLWI 833
VKV S++ FQG E +IIISTVR N +GF+S +R NVA+TR + L +
Sbjct: 1084 AEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLIV 1143
Query: 834 LGSERTLISSESIWGALV 851
LG+ L+ + +GAL+
Sbjct: 1144 LGNPHVLVRQDPCFGALL 1161
Score = 96 (38.9 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 569 RASLF---FSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVL 621
RAS F +T SS+ + + ++ +F + +DEA Q E E IPL L + I+ +L
Sbjct: 851 RASRFRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDGQIIL 910
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERL 650
GD QL +++S+++ G S+ ERL
Sbjct: 911 AGDPMQLGPVIKSRLAMAYGLNVSMLERL 939
Score = 90 (36.7 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTL 310
F+ LNE+Q A+ L DC R +++GPPGTGKT TV +L + R L
Sbjct: 739 FNPMLNENQQLAVKRILSG-DC--RPLPYVLFGPPGTGKTVTVIEAVLQVFHALPDSRIL 795
Query: 311 ACTPTNVA 318
C P+N A
Sbjct: 796 VCAPSNSA 803
Score = 42 (19.8 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 141 PEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVK 178
PE+V L+ TW + P D K NR K
Sbjct: 661 PEEVI-LQSPQVTWNWSHARDPPQDGQSTSKNNRKATK 697
Score = 40 (19.1 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 359 LKVNPGFEEIY 369
LK+NP FE+ Y
Sbjct: 615 LKLNPEFEQTY 625
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 149 (57.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 42/117 (35%), Positives = 67/117 (57%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGF-TVKV 784
N E V ++ L KA G + IGV++PY Q+ I + D F ++V
Sbjct: 1231 NHTEAVLVQGLVTLLLKA--GCRA-CDIGVIAPYRQQLKVISSLL-----QGDAFKALEV 1282
Query: 785 KSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILGSERTL 840
++D +QG ++ +II+S VR N G++G + + +R+NVA+TRA+H L +LGS TL
Sbjct: 1283 NTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQDWRRLNVAITRAKHKLLMLGSAPTL 1339
Score = 130 (50.8 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 32/96 (33%), Positives = 51/96 (53%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+F ++DEA+Q+ + PL A VL+GD QLP +V++ + G SLF+RL
Sbjct: 1074 DFCIVDEASQISQPVCIGPLFYA--QRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRLE 1131
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA 687
+ LN+QYRM+ +I N Y ++ G+
Sbjct: 1132 HHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECGS 1167
Score = 61 (26.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSR 339
LI G PGTGKT T+ L+ L L + T+ A+ + + LK K + R R
Sbjct: 963 LIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLK-LKRFKIGFLRLGR 1019
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 1344 WQAFLKCLSQKMESEYLQHPS--ESNNERELYVIQKLHGA 1381
++ L+C S+K + LQ PS ++ E ELYV Q + A
Sbjct: 1159 YEGRLECGSEKTANAVLQLPSRAQAEEELELYVCQPQYSA 1198
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 152 (58.6 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 40/116 (34%), Positives = 66/116 (56%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N+ E ++ + KA G IGV++PY Q+ I + + G V+V
Sbjct: 914 NVTEARLIVFLTSTFIKA--GCSPS-DIGVIAPYRQQLRIISDLLA---RSSVGM-VEVN 966
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILGSERTL 840
++D +QG ++ +I++S VR N G++G + K +R+NVALTRA+H L +LGS +L
Sbjct: 967 TVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAKHKLILLGSVSSL 1022
Score = 121 (47.7 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 31/100 (31%), Positives = 51/100 (51%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 755 KTFDFCIVDEASQISQPVCLGPLFFS--RRFVLVGDHQQLPPLVVNREARALGMSESLFK 812
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL + L +QYRM+ I N Y ++ G++
Sbjct: 813 RLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSD 852
Score = 63 (27.2 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 646 LIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNI---LLKLAK 692
Score = 62 (26.9 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 23/102 (22%), Positives = 47/102 (46%)
Query: 473 ISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLF---SHSVDEGISWAFVRKRYLLQ 529
+ E+ E V LL + LF + V+S+ ++ + + + A ++ ++
Sbjct: 12 LEEDGGAEAVPRVELLRKKADALFPETVLSRGVDNRYLVLAVETSQNERGAEEKRLHVTA 71
Query: 530 LHQRRSECLSVLRNLWNSL-----DELNLP--CTTSKLVLED 564
R E L +LRN W+S+ D ++L CT+ +++D
Sbjct: 72 SQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWIIDD 113
Score = 39 (18.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 623 GDECQLPAMVESKISDE 639
GD+ +P + SKI +E
Sbjct: 414 GDDASIPEAMLSKIQEE 430
Score = 39 (18.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 202 LPNKRIWNSLHMCGNWKVITQVLGTDSVVDERCEL 236
L NK + CG+ +V VL ++ D R L
Sbjct: 837 LSNKLTYAGKLECGSDRVANAVLALPNLKDARLSL 871
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 212 (79.7 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 78/272 (28%), Positives = 126/272 (46%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 76 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 133
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG----AN-VKSKSYEKQYLTGTE 703
RL + L +QYRM+ I N Y ++ G AN V + + K E
Sbjct: 134 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 193
Query: 704 F-GTYS----------------FINI--IGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
F YS F+N + E N+ E ++ + KA
Sbjct: 194 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 252
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
G IG+++PY Q+ I + G V+V ++D +QG ++ I+++S VR
Sbjct: 253 -GCSPS-DIGIIAPYRQQLKIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVR 305
Query: 805 CNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 306 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 337
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 241 (89.9 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 77/279 (27%), Positives = 142/279 (50%)
Query: 575 STASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL-PAMVE 633
+T ++ Y+ +++P ++++EAA++ E+ + L A H +LIGD QL P+
Sbjct: 978 TTGAAKYRQILQQVEP-RIVIVEEAAEVLEAHTIATLSKA-CQHLILIGDHQQLRPSANV 1035
Query: 634 SKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKS 693
++ SLFERL +N LN Q+RM P I+ Y++ L+ K
Sbjct: 1036 YDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMRPEIARLLTPHIYQD--LENHPSVLK- 1092
Query: 694 YEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY-KAWVGSKQKVS 752
YE+ + G + + +E S +N E V+++ Q L + ++ S+
Sbjct: 1093 YEQ--IKGVSSNLFFVEHNFPEQEIQEGKSHQNQHEAHFVVELCQYLLCQEYLPSQ---- 1146
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIG 812
I +++ YT Q+ +RK + K +KV +D +QG E DII++S VR N G +G
Sbjct: 1147 ITILTTYTGQLFCLRKLMPV----KTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKVG 1202
Query: 813 FISKPQRVNVALTRARHCLWILGSERTLISSESIWGALV 851
F+ P R+ VAL+RA+ ++ +G+ + +++ +W ++
Sbjct: 1203 FLQIPNRICVALSRAKKGMYCIGNMQ-MLAKVPLWSRII 1240
Score = 68 (29.0 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 35/112 (31%), Positives = 51/112 (45%)
Query: 243 GQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKT----KTVSML 298
GQW K + L++SQ+ A+ L + + +I GPPGTGKT K V L
Sbjct: 581 GQWPSKE----ALKLDDSQMEALQFALTK-------ELAIIQGPPGTGKTYVGLKIVQAL 629
Query: 299 LL--TLLRIKCRT---LACTPTNVAITELASRVLKLVKESYKR-DSRSNTPI 344
L ++ +I +T L TN A+ + + K S R RSN+ I
Sbjct: 630 LTNKSVWQINTQTFPILVVCYTNHALDQFLEGIYGCQKTSIVRVGGRSNSEI 681
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 1356 ESEYLQHPSESNNERELYVIQKLH 1379
E + QHP+ SN +++H
Sbjct: 1883 EMDGAQHPAWSNTANNFMNFEEIH 1906
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 392 SSMIDLLEDCVSQYHIYVEKLKERE--------DCNVNQSEEKECRKETEGSKGERKPFL 443
S++I LL+D VS + ++E N ++ + +ETE + + + +
Sbjct: 238 SNIISLLQDLVSVFP--ASSMQETSMLISLLPTSLNALRASGVDIEEETEKNLEKVQAII 295
Query: 444 KYVRER 449
KY++E+
Sbjct: 296 KYLQEK 301
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1212 QSIKNSLSVLCQSKC 1226
+ IK L V C +KC
Sbjct: 1413 EDIKYGLPVKCTTKC 1427
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 851 VCDA-KARQCFFNADEERNLAKARLEVSKELVEIGA 885
VC + Q FF ++E + +LE + E+ A
Sbjct: 1556 VCQPDEVTQIFFGFEDEPDARFVQLEDCSHIFEVQA 1591
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 152 (58.6 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 48/154 (31%), Positives = 78/154 (50%)
Query: 752 SIGVVSPYTAQVVAIR---KKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 827 SVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 886
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++GF+ P+R NVA+TRA+ L ++G+ L+ + W + K +
Sbjct: 887 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFLEFCKENGGY 945
Query: 861 FNADEERNLAKARLEVSKELVEIGAESLTSTSQG 894
AK L+ ++L++ G L+ ++ G
Sbjct: 946 TGCPFP---AKLDLQQGQDLLQ-GLSKLSPSTSG 975
Score = 88 (36.0 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 619 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVL 678
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK-----------HLLNIQYRMHP 668
GD QL ++ S ++ + G G SL ERL + N + K LL YR HP
Sbjct: 679 AGDPRQLGPVLRSPLAQKHGLGYSLLERLLTYNSLYKKGPNGYDPQFITKLLR-NYRSHP 737
Query: 669 SISLFPNLQFYRNQILDGANV 689
+I PN +Y ++ A+V
Sbjct: 738 TILDIPNQLYYDGELQACADV 758
Score = 87 (35.7 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPT 315
N Q+ AM +R R +I+GPPGTGKT T+ + +++ K LACTP+
Sbjct: 501 NPEQLQAMKHIVRGTT---RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPS 557
Query: 316 NVAITELASRV 326
N L R+
Sbjct: 558 NSGADLLCQRL 568
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 198 (74.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 78/266 (29%), Positives = 130/266 (48%)
Query: 596 IDEAAQLKESEST--IPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT-- 651
+DEAA E+E I L+ + +L GD QL +++S+ ++E G G +LFERL
Sbjct: 692 VDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 751
Query: 652 ---------SLNHSKHLLNIQ-YRMHPSI-SLFPNLQFYRNQILDGA--NVKSKSYEKQY 698
S N S I+ +R HP I SL+ N+ +Y + A + + + Y
Sbjct: 752 KCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNM-YYEGHLRTEAPMEIVCRFHNWFY 810
Query: 699 LTGTEFGTYSFINIIGGREDF--IYHSCRNIVEVSAVIKILQKL-YKAWVGSKQ-KVSIG 754
L F F ++ G + C N E+ V+ ++ L Y G K + IG
Sbjct: 811 LPNATF-PIMFHSVFGTTMNTKSSVSLCNN-KEIDVVMDYVKDLMYFGLNGEKLLQTDIG 868
Query: 755 VVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
++SPY Q I++++ ++ + S++ FQG E+ +II+S VR T +GF+
Sbjct: 869 IISPYKNQYQRIQEQLNM----RNWSQIDCGSVELFQGKEKHVIIVSFVRSFTP-KLGFL 923
Query: 815 SKPQRVNVALTRARHCLWILGSERTL 840
+ +R+NV L+R L ++G+ RTL
Sbjct: 924 NNERRLNVLLSRPISLLILIGNPRTL 949
Score = 92 (37.4 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 282 LIWGPPGTGKTKTV--SMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSR 339
+++GPPGTGKT T+ ++ L + R + L +N A E+A R+L+ + ++ + R
Sbjct: 562 IVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPR 621
Query: 340 SNTPI----CP-----LGDILL-FGNKDRLKVNPGFEEIYLNYRI 374
T I C + D+LL + N + P + ++ YRI
Sbjct: 622 PLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVH-QYRI 665
Score = 38 (18.4 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 136 LADFKPEKVSDLRRVGRTWTFVSVTTVP 163
L DF+ EK + L R S T VP
Sbjct: 67 LMDFRKEKFNLLDEQHRLRGIASTTDVP 94
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 195 (73.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 67/213 (31%), Positives = 108/213 (50%)
Query: 656 SKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEK-QYLTGTEFGTYSFINII 713
SK ++N YR HP I PN FY ++ A+ + S Y ++L F F +
Sbjct: 753 SKLIMN--YRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGFPVI-FHGVP 809
Query: 714 GGRE-DFIYHSCRNIVEVSAVIKILQKLY----KAWVGSKQKVSIGVVSPYTAQVVAIRK 768
G E + S NI E++ ++ L+KL K + IG+++PY QV I++
Sbjct: 810 GKDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKR 869
Query: 769 KIGFEYENKD--GF-TVKVKSIDGFQGGEEDIIIISTVRCNTGG-------SIGFISKPQ 818
I + + +D G +KV S++ FQG E +I++STVR + +IGF+ +
Sbjct: 870 AIDADKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEK 929
Query: 819 RVNVALTRARHCLWILGSERTLISSESIWGALV 851
R NVA+TRA+ L ++G+ L + ES WG +
Sbjct: 930 RFNVAVTRAKSLLIMVGNPMILRTDES-WGRFI 961
Score = 104 (41.7 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 57/200 (28%), Positives = 92/200 (46%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHA-----VLIGDECQLPAMVESKISDEAGFGRSL 646
NF +DEA ESE+ I +AG+ +A VL GD QL ++ S ++ G SL
Sbjct: 674 NF--VDEAGHAVESETII--SVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSL 729
Query: 647 FERLTSLNH----------SKHL--LNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKS 693
ERL + N ++++ L + YR HP I PN FY ++ A+ + S
Sbjct: 730 LERLMTQNDLYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQ 789
Query: 694 YEK-QYLTGTEFGTYSFINIIGGRE-DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKV 751
Y ++L F F + G E + S NI E++ ++ L+KL ++ K
Sbjct: 790 YCMWEHLPSKGFPVI-FHGVPGKDERESNSPSFFNIYEINILVDYLKKLLL----TQPKK 844
Query: 752 SIGVVSPYTAQVVA-IRKKI 770
I + P ++A RK++
Sbjct: 845 GISRIFPKDIGIIAPYRKQV 864
Score = 79 (32.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRVL 327
L++GPPGTGKT T+ + + + LAC P+N A +L +++
Sbjct: 552 LVFGPPGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQLCEKLI 599
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 407 IYVEKLKEREDCNVNQ 422
+Y++K+K R + VN+
Sbjct: 468 VYIDKMKFRVEFTVNR 483
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 210 (79.0 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 60/174 (34%), Positives = 94/174 (54%)
Query: 709 FINIIGGREDFIYH--SCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
F + G+E+ S N E + V KI KL KA G+K IG+++PY Q +
Sbjct: 20 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA--GAKPD-QIGIITPYEGQRSYL 76
Query: 767 RKKIGFE--YENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVAL 824
+ + F K V++ S+D FQG E+D II+S VR N IGF++ P+R+NVAL
Sbjct: 77 VQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVAL 136
Query: 825 TRARHCLWILGSERTLISSESIWGALVCDAKARQCFFNADEERNLAKARLEVSK 878
TRAR+ + I+G+ + L S + +W L+ K ++ NL ++ ++ SK
Sbjct: 137 TRARYGVIIVGNPKAL-SKQPLWNHLLSYYKEQKALVEGPLN-NLRESLMQFSK 188
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 151 (58.2 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 41/107 (38%), Positives = 60/107 (56%)
Query: 752 SIGVVSPYTAQVVAIR---KKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 826 SVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 885
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
++GF+ P+R NVA+TRA+ L I+G+ L+ + W
Sbjct: 886 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNP-LLLGHDPDW 931
Score = 88 (36.0 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 618 VLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVL 677
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK-----------HLLNIQYRMHP 668
GD QL ++ S ++ + G G SL ERL + N + K LL YR HP
Sbjct: 678 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLR-NYRSHP 736
Query: 669 SISLFPNLQFYRNQILDGANV 689
+I PN +Y ++ A+V
Sbjct: 737 TILDIPNQLYYEGELQACADV 757
Score = 83 (34.3 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 266 LACLRRLDCGH-RSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITEL 322
L +R + G R +I+GPPGTGKT T+ + +++ K LAC P+N L
Sbjct: 504 LQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLL 563
Query: 323 ASRV 326
R+
Sbjct: 564 CQRL 567
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 191 (72.3 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 73/239 (30%), Positives = 115/239 (48%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLA-GINHAVLIGDECQLPAMV 632
T S+S L ++++P F +++DEAAQ E E+ +PL LA VL GD QL V
Sbjct: 764 TLSTSQYLCQLDLEPGIFTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFV 823
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL S++ LL YR H +I + + FY +++ A+
Sbjct: 824 YSEFARERNLHVSLLDRLYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM--AS 881
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWV--- 745
K + K + T F + + Y+ N EV +++ ++++ K W
Sbjct: 882 GKQPPH-KDFYPLTFFTARG--EDVQEKNSTAYY---NNAEVFEIVERVEEMRKKWPVSW 935
Query: 746 GSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
G ++ SIGVVSPY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 936 GKLEEGSIGVVSPYADQVFRIRA----ELRKKRMSEVSVERVLNVQGKQFRVLFLSTVR 990
Score = 88 (36.0 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + V LI GP GTGKT T++ + +L
Sbjct: 626 QWDEQLDPR----LNAKQKEAILAITTPLSI-NLPPV-LIIGPYGTGKTFTLAQAVKHIL 679
Query: 304 RI-KCRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 680 KQPESRVLICTHSNSA 695
Score = 51 (23.0 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1019 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1049
Score = 43 (20.2 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1021 LSNYKLLNTAITRAQSLVAVVGDPIALCSVGR-CRKF 1056
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 205 (77.2 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 72/249 (28%), Positives = 122/249 (48%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 726 KTFDFCIVDEASQISQPICLGPLFFS--QRFVLVGDHQQLPPLVLNREARALGMSESLFK 783
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEKQYLTGTEFGTY 707
RL ++ L +QYRM+ I N Y ++ G++ V + L +
Sbjct: 784 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLELE 843
Query: 708 SFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIR 767
+ + ++ + E + + L KA G K IG+++PY Q+ I
Sbjct: 844 FYADY--SENPWMIGA----FEPNNPVCFLNT-DKA--GCKPS-DIGIIAPYRQQLKIIN 893
Query: 768 KKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTR 826
+ F + V+V ++D +QG ++ II++S VR N G IG + K +R+NVA+TR
Sbjct: 894 DLL-FHSSIR---MVEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITR 949
Query: 827 ARHCLWILG 835
A+H L +LG
Sbjct: 950 AKHKLILLG 958
Score = 65 (27.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSN 341
LI G PGTGKT T+ L+ L L + T+ A+ + ++ K K + R R+
Sbjct: 617 LIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLAKF-KIGFLRLGRTQ 675
Query: 342 TPICPLGDILLFGNKDRLKVNPG-----FEEIYLNYRI 374
DI F ++ + P EE+Y ++RI
Sbjct: 676 KVH---QDIQKFTEEEICRSKPIKSLALLEELYNSHRI 710
Score = 38 (18.4 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 409 VEKLKEREDCNVNQSEEKE 427
+ LKE N+NQ E K+
Sbjct: 160 IRHLKEMYRLNLNQEEVKQ 178
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 154 (59.3 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 49/154 (31%), Positives = 78/154 (50%)
Query: 752 SIGVVSPYTAQVVAIRK---KIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 826 SVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 885
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++GF+ P+R NVA+TRA+ L ++G+ L+ + W A + K +
Sbjct: 886 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKAFLEFCKENGGY 944
Query: 861 FNADEERNLAKARLEVSKELVEIGAESLTSTSQG 894
AK L+ + L++ G L+ ++ G
Sbjct: 945 TGCPFP---AKLDLQQGQNLLQ-GLSKLSPSTSG 974
Score = 87 (35.7 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + A VL
Sbjct: 618 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLLEVKEADNPGGQLVL 677
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK-----------HLLNIQYRMHP 668
GD QL ++ ++ + G G SL ERL + N + K LL YR HP
Sbjct: 678 AGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALYKKGPDGYNPQFITKLLR-NYRSHP 736
Query: 669 SISLFPNLQFYRNQILDGANV 689
+I PN +Y ++ A+V
Sbjct: 737 TILDIPNQLYYEGELQACADV 757
Score = 80 (33.2 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+I+GPPGTGKT T+ + +++ K LAC P+N L R+
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL 567
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 211 (79.3 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 77/267 (28%), Positives = 129/267 (48%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLT 651
+F ++DEA+Q+ + PL A VL+GD QLP +V+++ + G SLF+RL
Sbjct: 763 DFCIVDEASQISQPVCVGPLFYA--RRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRLE 820
Query: 652 SLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT---EFGTYS 708
+ LN+QYRM+ I N Y ++ G+ + S L + E G+ +
Sbjct: 821 LHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLA 880
Query: 709 FINI-IGGREDFIYHSCRNI-----VEVSAVIK-----ILQKLYKAWVGSKQKVS-IGVV 756
+I + + C + VE + ++ KL + + K IGV+
Sbjct: 881 WIQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEAALIHKLLLLLIKAGCKPGDIGVI 940
Query: 757 SPYTAQVVAIRKKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNTG-GSIGFI 814
+PY Q+ I + FT V+V ++D +QG ++ +I++S VR G +G +
Sbjct: 941 APYRQQLRTISGLL-----QASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGEL 995
Query: 815 SKP-QRVNVALTRARHCLWILGSERTL 840
K +R+NVA+TRA+ L +LGS TL
Sbjct: 996 LKDWRRLNVAITRAKSKLLMLGSATTL 1022
Score = 58 (25.5 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKR 336
LI G PGTGKT T+ L+ L L + T+ A+ + + LK + + R
Sbjct: 652 LIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLK-LKRFRVGFLR 705
Score = 53 (23.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 314 PTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDIL-LFGNKD 357
P +T SR L + RD TP+C GD++ L G +D
Sbjct: 19 PGQTTLTVSCSRSLSPTETCLLRDGWEMTPVCR-GDVVHLEGQRD 62
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 150 (57.9 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 752 SIGVVSPYTAQVVAIRK---KIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 806 SVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 865
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
++GF+ P+R NVA+TRA+ L ++G+ L+ + W
Sbjct: 866 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 911
Score = 89 (36.4 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 598 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVL 657
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK--HLLNIQ--------YRMHPS 669
GD QL ++ S ++ + G G SL ERL + N + K + N Q YR HP+
Sbjct: 658 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPT 717
Query: 670 ISLFPNLQFYRNQILDGANV 689
I PN +Y ++ A+V
Sbjct: 718 ILDIPNQLYYEGELQACADV 737
Score = 80 (33.2 bits), Expect = 7.3e-13, Sum P(3) = 7.3e-13
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+I+GPPGTGKT T+ + +++ K LAC P+N L R+
Sbjct: 501 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL 547
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 150 (57.9 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 752 SIGVVSPYTAQVVAIRK---KIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 826 SVGVISPYRKQVEKIRHCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 885
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
++GF+ P+R NVA+TRA+ L ++G+ L+ + W
Sbjct: 886 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
Score = 89 (36.4 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 618 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHSMEPESLVAIAGLMEVKETDNPGGQLVL 677
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK--HLLNIQ--------YRMHPS 669
GD QL ++ S ++ + G G SL ERL + N + K + N Q YR HP+
Sbjct: 678 AGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYRSHPT 737
Query: 670 ISLFPNLQFYRNQILDGANV 689
I PN +Y ++ A+V
Sbjct: 738 ILDIPNQLYYEGELQACADV 757
Score = 80 (33.2 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+I+GPPGTGKT T+ + +++ K LAC P+N L R+
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL 567
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 212 (79.7 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 78/272 (28%), Positives = 126/272 (46%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 754 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 811
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG----AN-VKSKSYEKQYLTGTE 703
RL + L +QYRM+ I N Y ++ G AN V + + K E
Sbjct: 812 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 871
Query: 704 F-GTYS----------------FINI--IGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
F YS F+N + E N+ E ++ + KA
Sbjct: 872 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 930
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
G IG+++PY Q+ I + G V+V ++D +QG ++ I+++S VR
Sbjct: 931 -GCSPS-DIGIIAPYRQQLKIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVR 983
Query: 805 CNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 984 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1015
Score = 64 (27.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 645 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI---LLKLAK 691
Score = 39 (18.8 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 172 ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+NRY V A N +Q + + I + L NK +
Sbjct: 44 DNRYLVLAVNTVQNKEGNCEKRLVITASQSLENKEL 79
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 149 (57.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 752 SIGVVSPYTAQVVAIR---KKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
++GV+SPY QV IR K+ E D +KV S++ FQG E +I+ISTVR +
Sbjct: 827 NVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 886
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKARQCF 860
++GF+ P+R NVA+TRA+ L ++G+ L+ + W + K +
Sbjct: 887 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDWKTFLEFCKENGGY 945
Query: 861 FNADEERNLAKARLEVSKELVEIGAESLTSTSQG 894
AK L+ ++L++ G L+ ++ G
Sbjct: 946 TGCPFP---AKLDLQQGQDLLQ-GLSKLSPSTSG 975
Score = 84 (34.6 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 572 LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKESESTIPLQ-LAGINHA-------VL 621
+ +T ++ +L S + I + IDEA E ES + + L + VL
Sbjct: 619 VLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVL 678
Query: 622 IGDECQLPAMVESKISDEAGFGRSLFERLTSLN--HSK-----------HLLNIQYRMHP 668
GD QL ++ S ++ + G G SL ERL + N + K LL YR HP
Sbjct: 679 AGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFITKLLR-NYRSHP 737
Query: 669 SISLFPNLQFYRNQILDGANV 689
+I PN +Y ++ A+V
Sbjct: 738 TILDIPNQLYYDGELQACADV 758
Score = 82 (33.9 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 258 NESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPT 315
N Q+ AM +R R +I+GPPGTGKT T+ + +++ K LAC P+
Sbjct: 501 NPEQLQAMKHIVRGTT---RPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPS 557
Query: 316 NVAITELASRV 326
N L R+
Sbjct: 558 NSGADLLCQRL 568
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 212 (79.7 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 78/272 (28%), Positives = 126/272 (46%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 840 KIFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 897
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDG----AN-VKSKSYEKQYLTGTE 703
RL + L +QYRM+ I N Y ++ G AN V + + K E
Sbjct: 898 RLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELE 957
Query: 704 F-GTYS----------------FINI--IGGREDFIYHSCRNIVEVSAVIKILQKLYKAW 744
F YS F+N + E N+ E ++ + KA
Sbjct: 958 FYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKA- 1016
Query: 745 VGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
G IG+++PY Q+ I + G V+V ++D +QG ++ I+++S VR
Sbjct: 1017 -GCSPS-DIGIIAPYRQQLKIINDLLA----RSIGM-VEVNTVDKYQGRDKSIVLVSFVR 1069
Query: 805 CNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 1070 SNKDGTVGELLKDWRRLNVAITRAKHKLILLG 1101
Score = 64 (27.6 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 731 LIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI---LLKLAK 777
Score = 39 (18.8 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 172 ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+NRY V A N +Q + + I + L NK +
Sbjct: 130 DNRYLVLAVNTVQNKEGNCEKRLVITASQSLENKEL 165
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 168 (64.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 81/271 (29%), Positives = 121/271 (44%)
Query: 613 LAGIN-HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHL-------- 659
++ IN VL GD QL +++S+++ G S+ ERL S L
Sbjct: 268 ISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNP 327
Query: 660 -----LNIQYRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKQYLTGTEFGTYSFI 710
L YR H ++ P+ FY ++ D V S +EK G F
Sbjct: 328 LLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPL---IFH 384
Query: 711 NIIGG--REDFI--YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
+ G RE + S V+V +L + + V SK IGV++PY QV
Sbjct: 385 GVRGNEAREGRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKD---IGVITPYRKQV--- 438
Query: 767 RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS------IGFISKPQRV 820
+KI N D +KV S++ FQG E +I+ISTVR N +GF+S +R
Sbjct: 439 -EKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRF 497
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALV 851
NVA+TR + L +LG+ L+ + +GAL+
Sbjct: 498 NVAITRPKALLIVLGNPHVLVR-DPCFGALL 527
Score = 103 (41.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVLIGD 624
R + +T SS+ + + ++ F + +DEA Q E E IPL L + IN VL GD
Sbjct: 221 RFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 280
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTS 652
QL +++S+++ G S+ ERL S
Sbjct: 281 PMQLGPVIKSRLAMAYGLNVSMLERLMS 308
Score = 89 (36.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 246 DEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV--SMLLLTLL 303
D++F F+ LNE+Q A+ L DC R +++GPPGTGKT T+ ++L +
Sbjct: 102 DKEF---FNPVLNENQKLAVRRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHYA 155
Query: 304 RIKCRTLACTPTNVA 318
R L C P+N A
Sbjct: 156 LPDSRILVCAPSNSA 170
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 183 (69.5 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 890 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 945
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 946 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 82 (33.9 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLAI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK--CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETSRILICTHSNSA 703
Score = 51 (23.0 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
Score = 44 (20.5 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1029 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1064
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 154 (59.3 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 40/137 (29%), Positives = 76/137 (55%)
Query: 708 SFIN---IIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVV 764
+F+N + RE+ + N VE V+++++ L V + + IGV++ Y +Q+
Sbjct: 1434 AFVNTDALPDSREEAKGNRIVNPVEAQLVVQLVESLMTLGVPANE---IGVMTHYRSQLA 1490
Query: 765 AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVA 823
++ K+ D V++ + D FQG +++++++S VR N IG + + +R+NVA
Sbjct: 1491 LLKHKLLRGKNTGDATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVA 1550
Query: 824 LTRARHCLWILGSERTL 840
TRA+ L ++GS TL
Sbjct: 1551 FTRAKTKLLVIGSRETL 1567
Score = 111 (44.1 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHA---VLIGDECQLPAMVESKISDEAGFGRS 645
+ ++ ++DEA+Q+ T+P+ L I A VL+GD QLP +V+++ + + G S
Sbjct: 1275 RTFDYCIVDEASQI-----TLPICLGPIRMARTFVLVGDHNQLPPLVQNEEARKGGLDVS 1329
Query: 646 LFERLTSLNHSKHLLNI--QYRMHPSISLFPNLQFYRNQILDG 686
LF +L S H ++N+ QYRM + N Y + G
Sbjct: 1330 LF-KLLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCG 1371
Score = 68 (29.0 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKES 333
L+ G PGTGKT T++ ++ L+R L + T+ A+ + +LKL +S
Sbjct: 1169 LVLGMPGTGKTTTIAHIIRALIRQGKSVLLTSYTHSAVDNI---LLKLKGDS 1217
Score = 38 (18.4 bits), Expect = 2.3e-12, Sum P(4) = 2.3e-12
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 1253 LQKFVELSTEDFFRCIFPLDWRES 1276
L KFV L + + C P D ES
Sbjct: 1576 LSKFVRLMEDRNWVCDLPADALES 1599
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 183 (69.5 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 831
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 890 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 945
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 946 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 89 (36.4 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 31/77 (40%), Positives = 40/77 (51%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L C V LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPL-CIQLPPV-LIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK--CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETSRILICTHSNSA 703
Score = 51 (23.0 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1057
Score = 43 (20.2 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1029 LSNYKLLNTAITRAQSLVAVVGDPVALCSIGR-CRKF 1064
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 147 (56.8 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 752 SIGVVSPYTAQVVAIR---KKIGFEYENKDGFT-VKVKSIDGFQGGEEDIIIISTVRCNT 807
S+GV+SPY QV IR K+ + D +KV S++ FQG E +I+ISTVR +
Sbjct: 826 SVGVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQ 885
Query: 808 GG-------SIGFISKPQRVNVALTRARHCLWILGSERTLISSESIW 847
++GF+ P+R NVA+TRA+ L ++G+ L+ + W
Sbjct: 886 SFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNP-LLLGHDPDW 931
Score = 87 (35.7 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 46/165 (27%), Positives = 69/165 (41%)
Query: 554 PCTTSKLVLEDFCF---KRAS---LFFSTASSSYKLHSVE--IKPLNFLVIDEAAQLKES 605
PC DF F K+ + +T ++ +L S + I + IDEA E
Sbjct: 594 PCCNWDAKKGDFVFPSKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEP 653
Query: 606 ESTIPLQ-LAGINHA-------VLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN--H 655
ES + + L + A VL GD QL ++ ++ + G G SL ERL + N +
Sbjct: 654 ESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTFNALY 713
Query: 656 SK-----------HLLNIQYRMHPSISLFPNLQFYRNQILDGANV 689
K LL YR HP+I PN +Y ++ A+V
Sbjct: 714 KKGPDGYNPQFITKLLR-NYRSHPTILDVPNRLYYDGELQACADV 757
Score = 80 (33.2 bits), Expect = 2.6e-12, Sum P(3) = 2.6e-12
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+I+GPPGTGKT T+ + +++ K LAC P+N L R+
Sbjct: 521 IIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRL 567
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 185 (70.2 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 760 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFV 819
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 820 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 877
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 878 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 933
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 934 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVSVERVLNVQGKQFRVLFLSTVR 986
Score = 84 (34.6 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 621 QWDEQLDPR----LNAKQKEAVLAITTPLSI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 674
Query: 304 RIK--CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 675 QQQDTSRILICTHSNSA 691
Score = 51 (23.0 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1015 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1045
Score = 44 (20.5 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1017 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1052
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 183 (69.5 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 889 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 944
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 945 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 86 (35.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLSI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK-CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETRILICTHSNSA 702
Score = 51 (23.0 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
Score = 44 (20.5 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1028 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1063
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 167 (63.8 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 82/317 (25%), Positives = 143/317 (45%)
Query: 537 CLSVLRNLWNSLDELN-LPCTTSKLVLEDFCF-KRASLFFSTASSSYKLHSVEIKPLNF- 593
C S L+ ++ L+E S ++ K+A + T + + L + L F
Sbjct: 1058 CFSHLKTVFQELEECRAFELLKSTADRANYLMTKQAKIVAMTCTHA-ALKRRDFLQLGFK 1116
Query: 594 ---LVIDEAAQLKESESTIPLQL-------AGINHAVLIGDECQLPAMVESKISDE-AGF 642
L+++E+AQ+ E E+ IP+ L A + +LIGD QLP +V++ + +
Sbjct: 1117 YDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHM 1176
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
+SLF R L LN Q R PS++ N + YR+ + D + VK ++ G
Sbjct: 1177 DQSLFTRFVRLGIPYIELNAQGRARPSLAKLYNWR-YRD-LGDLSIVKEAPIFQRANAGF 1234
Query: 703 EFGTYSFINI--IGGREDFIYHSC--RNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSP 758
+ Y +N+ GR + +N E ++ + +Y +G I +++
Sbjct: 1235 SY-EYQLVNVPDYEGRGESTPSPWFYQNQGEAEYIVSVY--IYMRLLGYPAN-KISILTT 1290
Query: 759 YTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISK 816
Y Q + IR I G KV ++D FQG + D I++S VR +G +
Sbjct: 1291 YNGQKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILLSLVRTRF---VGHLRD 1347
Query: 817 PQRVNVALTRARHCLWI 833
+R+ VA++RAR L++
Sbjct: 1348 VRRLVVAMSRARLGLYV 1364
Score = 96 (38.9 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 260 SQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKC---RTLACTPTN 316
+QVGA+++ G + G+ ++ GPPGTGKT T ++ +L +L C RTL T +N
Sbjct: 869 TQVGAIIS-------GIQPGLTMVVGPPGTGKTDT-AVQILNVLYHNCPSQRTLIITHSN 920
Query: 317 VAITELASRVLK 328
A+ +L ++++
Sbjct: 921 QALNDLFEKIME 932
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 183 (69.5 bits), Expect = 7.9e-12, Sum P(3) = 7.9e-12
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 830
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 889 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 944
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 945 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 84 (34.6 bits), Expect = 7.9e-12, Sum P(3) = 7.9e-12
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLAI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK-CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETRILICTHSNSA 702
Score = 51 (23.0 bits), Expect = 7.9e-12, Sum P(3) = 7.9e-12
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
Score = 44 (20.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1028 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1063
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 171 (65.3 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 79/261 (30%), Positives = 119/261 (45%)
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTSL-------N-------HSKHLLNI--- 662
VL GD QL +++S+++ G S ERL S N H+ L+
Sbjct: 911 VLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVK 970
Query: 663 QYRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKQYLTGTEFGTYSFINIIGGR-E 717
YR H ++ + P+ FY ++ D V S +EK G F + G
Sbjct: 971 NYRSHEALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPL---IFHGVRGSEAR 1027
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVS-IGVVSPYTAQVVAIRKKIGFEYEN 776
+ S N E V++ L + + S+ S IGV++PY QV +KI N
Sbjct: 1028 EGKSPSWFNPAEAVQVLRYCCLLAHS-ISSQVSASDIGVITPYRKQV----EKIRILLRN 1082
Query: 777 KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS------IGFISKPQRVNVALTRARHC 830
D +KV S++ FQG E +IIISTVR N +GF+S +R NVA+TR +
Sbjct: 1083 VDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKAL 1142
Query: 831 LWILGSERTLISSESIWGALV 851
L +LG+ L+ + +GAL+
Sbjct: 1143 LIVLGNPHVLVR-DPCFGALL 1162
Score = 102 (41.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVLIGD 624
R + +T SSS + + ++ +F + +DEA Q E E IPL L + I+ VL GD
Sbjct: 856 RFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGD 915
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTS 652
QL +++S+++ G S ERL S
Sbjct: 916 PMQLGPVIKSRLAMAYGLNVSFLERLMS 943
Score = 89 (36.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 253 FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV--SMLLLTLLRIKCRTL 310
F+ LNE+Q A+ L DC R +++GPPGTGKT T+ ++L + R L
Sbjct: 741 FNPVLNENQKLAVKRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRIL 797
Query: 311 ACTPTNVA 318
C P+N A
Sbjct: 798 VCAPSNSA 805
Score = 45 (20.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 19/87 (21%), Positives = 34/87 (39%)
Query: 302 LLRIKCRTLACTPTNVAITELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKV 361
LL + +A N L + ++ V + ++ DSR++ G +L G L
Sbjct: 70 LLNVGQEVIAVVEENKVSNGLKAIRVEAVSDKWEDDSRNHGSPSDCGPRVLIGCVTSLVE 129
Query: 362 NPGFEEIYLNYRIKKLRECFAPLSG-W 387
G + ++ + E F P G W
Sbjct: 130 GAGCISQTTYFSLESVCEGFEPCKGDW 156
Score = 42 (19.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 359 LKVNPGFEEIY 369
LK+NP FE+ Y
Sbjct: 614 LKINPEFEQAY 624
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 170 (64.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 82/271 (30%), Positives = 121/271 (44%)
Query: 613 LAGIN-HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHSKHL-------- 659
++ IN VL GD QL +++S+++ G S+ ERL S L
Sbjct: 905 ISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNP 964
Query: 660 -----LNIQYRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKQYLTGTEFGTYSFI 710
L YR H ++ P+ FY ++ D V S +EK G F
Sbjct: 965 LLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPKVVTSLLGWEKLPRKGFPL---IFH 1021
Query: 711 NIIGG--REDFI--YHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAI 766
+ G RE + S V+V +L + + V SK IGV++PY QV
Sbjct: 1022 GVRGNEAREGRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKD---IGVITPYRKQV--- 1075
Query: 767 RKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS------IGFISKPQRV 820
+KI N D +KV S++ FQG E +I+ISTVR N +GF+S +R
Sbjct: 1076 -EKIKILLRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRF 1134
Query: 821 NVALTRARHCLWILGSERTLISSESIWGALV 851
NVA+TR + L ILG+ L+ + +GAL+
Sbjct: 1135 NVAITRPKALLIILGNPHVLVR-DPCFGALL 1164
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 569 RASLFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQL-AGIN-HAVLIGD 624
R + +T SS+ + + ++ F + +DEA Q E E IPL L + IN VL GD
Sbjct: 858 RFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGD 917
Query: 625 ECQLPAMVESKISDEAGFGRSLFERLTS 652
QL +++S+++ G S+ ERL S
Sbjct: 918 PMQLGPVIKSRLAMAYGLNVSMLERLMS 945
Score = 89 (36.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 246 DEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTV--SMLLLTLL 303
D++F F+ LNE+Q A+ L DC R +++GPPGTGKT T+ ++L +
Sbjct: 739 DKEF---FNPVLNENQKLAVRRILSG-DC--RPLPYILFGPPGTGKTVTIIEAVLQVHYA 792
Query: 304 RIKCRTLACTPTNVA 318
R L C P+N A
Sbjct: 793 LPDSRILVCAPSNSA 807
Score = 52 (23.4 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 347 LGDILLFGNKD-RLKVNPGFEEIY 369
+G ++ +D LK+NPGFE++Y
Sbjct: 541 IGYVMEIHEEDVTLKLNPGFEQMY 564
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 183 (69.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 772 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFV 831
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 832 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 889
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 890 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 945
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 946 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 998
Score = 82 (33.9 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLAI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK--CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETSRILICTHSNSA 703
Score = 51 (23.0 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1027 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1057
Score = 44 (20.5 bits), Expect = 6.5e-11, Sum P(3) = 6.5e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1029 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1064
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 183 (69.5 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 73/237 (30%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 889 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 944
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 945 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 86 (35.3 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ + +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLSI--QLPPVLIIGPYGTGKTFTLAQAVKHIL 686
Query: 304 RIK-CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETRILICTHSNSA 702
Score = 51 (23.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1056
Score = 45 (20.9 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 26/122 (21%), Positives = 54/122 (44%)
Query: 1665 QVGTSKDVPSKRPASLPEDTDAQNK----NDNTMVMNLDQLCKALEALKMLDYGNNGNHG 1720
++ +S P S P+D+ AQ K ++N N + Y N +G
Sbjct: 1763 RISSSSVQPCSEEVSTPQDSLAQCKELQDHNNPSSFNFSSPESWVNTTSSTPYQNIPCNG 1822
Query: 1721 NSVKYQVGTSKDVPSKRSASLPED-MDAQNMNDDTLAMDLDQLCKYVDKYSTILAARMLE 1779
+S Q VPSK + PED + ++N+ + + + + L +++ ++ ++ + +
Sbjct: 1823 SSRTAQP-RELIVPSK-TVKPPEDQLKSENLEVSS-SFNYNVL-QHLGQFPPLMPNKQIV 1878
Query: 1780 ES 1781
ES
Sbjct: 1879 ES 1880
Score = 44 (20.5 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1028 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1063
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 174 (66.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 85/307 (27%), Positives = 138/307 (44%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLA----GINHA 619
K A + T + + L E+ L F +V++EAAQ+ E E+ IPL L G N
Sbjct: 1032 KEAKIIAMTCTHA-ALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNRL 1090
Query: 620 ---VLIGDECQLPAMVESKISDE-AGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPN 675
++IGD QLP +V+++ + + +SLF RL L+ L+ Q R I+
Sbjct: 1091 KRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPNVQLDRQGRARAQIAEL-- 1148
Query: 676 LQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIG----GREDFIYHSCRNIVEVS 731
Q+ N + + +V + G F + FI+I G H +N+ E
Sbjct: 1149 YQWRYNGLGNLPHVDGLPQFQNANAGFAF-PFQFIDIPDFNGHGETQPSPHFYQNLGEAE 1207
Query: 732 AVIKILQKLYKAWVG-SKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSID 788
+ Y +G +K+SI ++ Y Q IR + G KV ++D
Sbjct: 1208 YACALYT--YMRILGYPAEKISI--LTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVD 1263
Query: 789 GFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWG 848
+QG + D II+S V+ +IG I +R+ VAL+RAR L++LG + + +
Sbjct: 1264 KYQGQQNDFIILSLVKTR---NIGHIRDVRRLVVALSRARLGLYVLGRSKVFMDCLELTP 1320
Query: 849 ALVCDAK 855
A+ AK
Sbjct: 1321 AMRIFAK 1327
Score = 85 (35.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
+K P +S ++QV + + + G + G+ ++ GPPGTGKT ++ +
Sbjct: 790 KKVTP-YSYDPRKNQVKFTPSQVEAIKSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNW 848
Query: 306 -KCRTLACTPTNVAITELASRVLKL 329
RTL T +N A+ +L +++ L
Sbjct: 849 PNQRTLIVTHSNQALNQLFEKIIAL 873
Score = 46 (21.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 25/112 (22%), Positives = 42/112 (37%)
Query: 387 WRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYV 446
W + M D Y+ L E+ +N E E ++ EG + +KY
Sbjct: 195 WENVRQKMTAAAADNNEFERTYLWNLIEKFKRVLNSLEPNEAQESEEGEVRDPIDSIKYC 254
Query: 447 RERFKCAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDS-FGNLLFQ 497
ERF ++ L + + S + + L SL+ + G+L FQ
Sbjct: 255 -ERFIELLIDLES--ILQTRRFFNSVLHSSHILTHCLLSSLISTDAGSLFFQ 303
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 185 (70.2 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 74/237 (31%), Positives = 113/237 (47%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T S+S L ++++P F +++DEAAQ E E+ +PL LA N VL GD QL V
Sbjct: 771 TLSTSQYLCQLDLEPGFFTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFV 830
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 831 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 888
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K +++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 889 GKQPAHKDFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 944
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 945 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 997
Score = 84 (34.6 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 29/76 (38%), Positives = 38/76 (50%)
Query: 244 QWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLL 303
QWDE+ P LN Q A+LA L + LI GP GTGKT T++ +L
Sbjct: 633 QWDEQLDPR----LNAKQKEAVLAITTPLSI--QLPPVLIIGPYGTGKTFTLAQAAKHIL 686
Query: 304 RIK-CRTLACTPTNVA 318
+ + R L CT +N A
Sbjct: 687 QQQETRILICTHSNSA 702
Score = 51 (23.0 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1026 GFLSNYKLLNTAITRAQSLVAVVGDPVALCS 1056
Score = 43 (20.2 bits), Expect = 2.2e-10, Sum P(4) = 2.2e-10
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1028 LSNYKLLNTAITRAQSLVAVVGDPVALCSIGR-CRKF 1063
Score = 41 (19.5 bits), Expect = 3.5e-11, Sum P(4) = 3.5e-11
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1665 QVGTSKDVPSKRPASLPEDTDAQNK 1689
++ +S P AS P+D+ AQ K
Sbjct: 1783 RISSSSAQPCVEEASAPQDSLAQGK 1807
Score = 38 (18.4 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1602 QVQVGTSKDVPSKRPASLPEDTDAQ 1626
Q ++ +S P AS P+D+ AQ
Sbjct: 1781 QRRISSSSAQPCVEEASAPQDSLAQ 1805
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 178 (67.7 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 78/288 (27%), Positives = 136/288 (47%)
Query: 568 KRASLFFSTASSSYKLHSVEIKPLNF----LVIDEAAQLKESESTIPLQLA----GINHA 619
K A + T + + L E+ L F ++++E+AQ+ E E+ IPL L G+N
Sbjct: 1046 KEAKIIAMTCTHA-ALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRL 1104
Query: 620 ---VLIGDECQLPAMVESKISDE-AGFGRSLFERLTSLNHSKHLLNIQYRMHPSI-SLFP 674
++IGD QLP ++++ + + +SLF RL L L+ Q R SI SL+
Sbjct: 1105 KRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQGRARASICSLY- 1163
Query: 675 NLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINI-----IGGREDFIYHSCRNIVE 729
++ ++ D ++ + KQ G Y IN+ +G E Y +N+ E
Sbjct: 1164 --KWRYKKLEDLQHIFERDEYKQANPGFVHD-YQLINVEDFKGVGESEPNPYFY-QNLAE 1219
Query: 730 VSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSI 787
++ + +Y +G I +++ Y Q IR I N G+ K+ ++
Sbjct: 1220 AEYIVAVY--MYMRLLGYPA-AKISILTTYNGQKHLIRDVINARCGNNPLIGWPHKITTV 1276
Query: 788 DGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILG 835
D +QG + D I+IS VR ++G + +R+ VA++RAR L++ G
Sbjct: 1277 DKYQGQQNDYILISLVRTK---AVGHLRDVRRLVVAMSRARLGLYVFG 1321
Score = 87 (35.7 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 247 EKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI- 305
E GP S ++ + + + G + G+ L+ GPPGTGKT ++ +
Sbjct: 798 EARGPYPSDKPKQNSIRFTPTQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNH 857
Query: 306 -KCRTLACTPTNVAITELASRVLKL 329
RTL T +N A+ +L +++ L
Sbjct: 858 PNQRTLIVTHSNQALNQLFEKIMAL 882
Score = 48 (22.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 377 LRECFAPLSGWRHCFSSM-IDLLED------CVSQYHIYVEKLKEREDCNVNQSEE--KE 427
LRE A L HCF+SM I+L + +S +H + +E+E V + + K
Sbjct: 158 LRERTALLMFINHCFNSMEIELCREQAKRLVSLSMWHCLQPRRREQELREVPEWRKYWKR 217
Query: 428 CRKETEGSKGE 438
K+ + SK E
Sbjct: 218 LLKKEKDSKPE 228
Score = 41 (19.5 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++++ E +R+ +I + +PYGT
Sbjct: 561 RREIKAEWENLRKHDVCFLITVKPTQPYGT 590
Score = 39 (18.8 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 398 LEDCVSQYHIYVE-KLKEREDCNVNQSEEKECRKETEGSKGERKP 441
LE QY++ E ++ R+ E+ +KE++G E KP
Sbjct: 738 LEASFPQYNLKCEVPVENRQPPFRLIFEDVPIQKESDGEDPEEKP 782
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 194 FFIYLTNILPNKRIWNSL 211
F I L +LP +R +N++
Sbjct: 270 FIIDLEALLPTRRFFNTV 287
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 151 (58.2 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 663 QYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY---LTGTEFGTYSFINIIGGREDF 719
+Y +H ++ P + +RN + D + S E+ L E + +I ++ F
Sbjct: 332 EYSLHTILN--PQPKKFRN-LFDPLVLIDTSLERDVEKRLETYEHAVFDTNSINKTKQGF 388
Query: 720 IYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ---VVAIRKKIGFEYEN 776
Y N+ E I Q+L K V Q I +++PY Q V + ++ G E
Sbjct: 389 SY---ANLAEAKIAIGHYQRLLKYGV---QPSDIAIITPYKGQTSLVTKLMEEFGAETGY 442
Query: 777 KDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWILGS 836
D + ++D QG E +++I + VR N ++GF+S+ +R+NV +TRA+ +G+
Sbjct: 443 TDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGN 502
Query: 837 ERTLISSE 844
L S+
Sbjct: 503 GYLLAESK 510
Score = 118 (46.6 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 574 FSTASSSYKLHSVEIKPLN--FLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
F+T +S+ ++ K + +IDEAAQ+ E++ T P + + V+ GD QLPA+
Sbjct: 213 FATIGASFVDFVMKHKKFDPCLCIIDEAAQVMEAQ-TWPA-VYKMKRIVMAGDPKQLPAL 270
Query: 632 VESKISDEAGFGRSLFERLTSL--NHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANV 689
V + + G S+ +R+ N S +L QYR + I+ + N FY NQ+ +V
Sbjct: 271 VFTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLK--TDV 328
Query: 690 KSKSY 694
K Y
Sbjct: 329 KCHEY 333
Score = 91 (37.1 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 283 IWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
I GPPGTGKT T+++LL L++ K + + PT A+ + K +K
Sbjct: 87 IQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANIRMMTKKTLK 135
Score = 50 (22.7 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 1445 VTD-VWQSFGDVLDSIFFIVQHFLYNEKEMIEWISKSHKNVNNYHS 1489
VTD V +FG L+S ++ N++EMI W + ++N +Y +
Sbjct: 540 VTDYVSNNFGQDLESFM----NYS-NDEEMINWCKRFNENGPDYRA 580
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 130 (50.8 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 55/156 (35%), Positives = 83/156 (53%)
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNT---GG 809
IGV++ Y AQ+ + KKI F DG +++ + D FQG ++ IIIS VR N+ GG
Sbjct: 1361 IGVMTLYRAQL-RLLKKI-FNKNVYDG--LEILTADQFQGRDKKCIIISMVRRNSQLNGG 1416
Query: 810 SIGFISKPQRVNVALTRARHCLWILGSERTL-----ISS------ESIWGALVC-DAKAR 857
++ + + +RVNVA+TRA+ L I+GS+ T+ I S E W +C DA +
Sbjct: 1417 AL--LKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEERNWVYTMCKDALYK 1474
Query: 858 QCFFNADEERNLAKARLEVSKELVEIGAESLTSTSQ 893
F D + +AR K GA+ +TS S+
Sbjct: 1475 YKF--PDRSNAIDEARKGCGKRT---GAKPITSKSK 1505
Score = 122 (48.0 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 583 LHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
L ++ K +++++DEA+Q+ + PL+ N +++GD QLP +V++ + G
Sbjct: 1172 LFTLNEKDFDYVILDEASQISMPVALGPLRYG--NRFIMVGDHYQLPPLVKNDAARLGGL 1229
Query: 643 GRSLFERLTSLNHSKHL--LNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYE 695
SLF+ H + + L +QYRM I N Y N++ G N V ++S E
Sbjct: 1230 EESLFKTFCE-KHPESVAELTLQYRMCGDIVTLSNFLIYDNKLKCGNNEVFAQSLE 1284
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 252 SFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLA 311
S +TLN +Q A+ +R D LI G PGTGKT ++ ++ L+ R L
Sbjct: 1047 SKDTTLNLNQKEAIDKVMRAEDYA------LILGMPGTGKTTVIAEIIKILVSEGKRVLL 1100
Query: 312 CTPTNVAITEL 322
+ T+ A+ +
Sbjct: 1101 TSYTHSAVDNI 1111
Score = 39 (18.8 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 225 GTDSVVDERCELC 237
G D +VDER +LC
Sbjct: 997 GVD-IVDERSKLC 1008
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 155 (59.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSK--QKVS---IGVVSPYTAQVVAIRKKIGFE----YEN 776
N E+ V++ LQKL ++ G + +S IG++SPY QV IR I +
Sbjct: 561 NTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPYRKQVEKIRLAITSKDPVLRAL 619
Query: 777 KDGFTVKVKSIDGFQGGEEDIIIISTVR-CNT------GGSIGFISKPQRVNVALTRARH 829
D +KV S++ FQG E +I+ISTVR C+ +GF+ P+R+NVALTRA+
Sbjct: 620 PDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKA 679
Query: 830 CLWILGSERTLISSESIW 847
L ++G+ L S + W
Sbjct: 680 LLIVVGNAAVL-SKDPHW 696
Score = 89 (36.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/55 (43%), Positives = 29/55 (52%)
Query: 282 LIWGPPGTGKTKT-VSMLLLTLLRIK-CRTLACTPTNVAITELASRVLKLVKESY 334
LI+GPPGTGKT T V + K R LAC P+N A L R+L + Y
Sbjct: 281 LIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAPRY 335
Score = 88 (36.0 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 59/233 (25%), Positives = 96/233 (41%)
Query: 572 LFFSTASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGI------------N 617
+ +T ++ +L S P F + IDE E ES + + AG+
Sbjct: 379 ILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAI--AGLLTTMDPDTNRNGG 436
Query: 618 HAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSLN----HSKHLLNIQ--------YR 665
VL GD QL ++ S ++ + G G SL ERL N S N Q YR
Sbjct: 437 QLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYR 496
Query: 666 MHPSISLFPNLQFYRNQI--LDGANVKSKSYEKQYLTGTEFGTYS----FINIIGGRE-D 718
H +I PN FY +++ +G+ +++ Y T E F + G E +
Sbjct: 497 SHKAILKVPNELFYDSELKAYEGSEPDVRNF---YCTWEELPNRGVPIIFHGVCGEDERE 553
Query: 719 FIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVA-IRKKI 770
S N E+ V++ LQKL + S+ + +SP +++ RK++
Sbjct: 554 AKSPSFFNTAEIEVVVQYLQKLLQ----SQGRRGCPTISPKEIGIISPYRKQV 602
Score = 51 (23.0 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 1519 RKYVSRL-LPLEFCD-ALRKIENHNCLNVHEISQAFKKIGNPLVIASLGKNCSQFLCPDA 1576
RK V ++ L + D LR + + L V + + F+ +++ S ++CS++L D
Sbjct: 599 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEE-FQGQERRVILISTVRSCSEYLQLDQ 657
Query: 1577 IFVNMKVMKSTDEIFGILYPKMEACQVQVGTSKDVPSKRP 1616
F + +K+ + + + +A + VG + V SK P
Sbjct: 658 TF-RLGFLKNPKRL-NVALTRAKALLIVVGNAA-VLSKDP 694
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 164 (62.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 76/260 (29%), Positives = 115/260 (44%)
Query: 620 VLIGDECQLPAMVESKISDEAGFGRSLFERLTS----LNHS---------KHLLNIQ--- 663
VL GD QL +++S+++ G S+ ERL S L LL +
Sbjct: 914 VLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDEDAFGACGAYNPLLVTKLVK 973
Query: 664 -YRMHPSISLFPNLQFYRNQI---LDGANVKSK-SYEKQYLTGTEFGTYSFINIIGGR-E 717
YR H ++ P+ FY ++ D V S +EK G F + G
Sbjct: 974 NYRSHSALLALPSRLFYHRELEVCADPTVVASLLGWEKLPRKGFPL---IFHGVRGNEAR 1030
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
+ S N E V++ L ++ IGV++PY QV +KI N
Sbjct: 1031 EGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQV----EKIKILLRNV 1086
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGS------IGFISKPQRVNVALTRARHCL 831
D +KV S++ FQG E ++IISTVR N +GF+S +R NVA+TR + L
Sbjct: 1087 DLMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1146
Query: 832 WILGSERTLISSESIWGALV 851
+LG+ L+ + +GAL+
Sbjct: 1147 IVLGNPHVLVR-DPCFGALL 1165
Score = 94 (38.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 232 ERCELCSVQRKGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGK 291
E L +V + EKF F+ LNE+Q A+ L DC R +++GPPGTGK
Sbjct: 726 EASRLDAVSGSPKAREKF---FNPMLNENQKLAVRRILSG-DC--RPIPYVLFGPPGTGK 779
Query: 292 TKTVSMLLLTLLRI--KCRTLACTPTNVA 318
T T+ +L + R L C P+N A
Sbjct: 780 TVTIIEAILQVFHALPDSRILVCAPSNSA 808
Score = 41 (19.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 347 LGDILLFGNKD-RLKVNPGFEEIY 369
+G ++ +D LK+NP FE+ Y
Sbjct: 604 IGYVVEIHEEDVTLKLNPEFEQAY 627
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 141 PEKVSDLRRVGRTWTFVSVTTVPDDEDENKKENRYKVK 178
PE++ L+ TW + D K+NR VK
Sbjct: 664 PEEII-LQPPQVTWNWTHAQDTKRDGQSTSKKNRRAVK 700
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 155 (59.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 50/138 (36%), Positives = 75/138 (54%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSK--QKVS---IGVVSPYTAQVVAIRKKIGFE----YEN 776
N E+ V++ LQKL ++ G + +S IG++SPY QV IR I +
Sbjct: 793 NTAEIEVVVQYLQKLLQSQ-GRRGCPTISPKEIGIISPYRKQVEKIRLAITSKDPVLRAL 851
Query: 777 KDGFTVKVKSIDGFQGGEEDIIIISTVR-CNT------GGSIGFISKPQRVNVALTRARH 829
D +KV S++ FQG E +I+ISTVR C+ +GF+ P+R+NVALTRA+
Sbjct: 852 PDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKA 911
Query: 830 CLWILGSERTLISSESIW 847
L ++G+ L S + W
Sbjct: 912 LLIVVGNAAVL-SKDPHW 928
Score = 89 (36.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 24/55 (43%), Positives = 29/55 (52%)
Query: 282 LIWGPPGTGKTKT-VSMLLLTLLRIK-CRTLACTPTNVAITELASRVLKLVKESY 334
LI+GPPGTGKT T V + K R LAC P+N A L R+L + Y
Sbjct: 513 LIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAPRY 567
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 183 (69.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 84/295 (28%), Positives = 136/295 (46%)
Query: 576 TASSSYKLHSVEI-KPL-NFLVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T S S +L ++ + K L + +DEAAQ E E+ +PL LA + VL GD Q+ +
Sbjct: 934 TLSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPEL 993
Query: 633 ESKISDEAGFGRSLFERLTSLNHS----KHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S + E SL ERL S K LL YR H +I F + FY +++ A+
Sbjct: 994 FSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLV--AS 1051
Query: 689 VKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLY-KAWVGS 747
K +++ Y T F T + + +++ + EV + L+K + AW G
Sbjct: 1052 GKQPRHDRFYPL-TFFTTRG--EDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAW-GK 1107
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR--- 804
SIG+++PY+ QV IR ++ + + G + V+ + QG + + +STVR
Sbjct: 1108 LNDTSIGIMTPYSDQVFRIRSELR---KRRMG-GISVERVLNVQGKQFRAVFLSTVRTRR 1163
Query: 805 -CNTGGSI----------------GFISKPQRVNVALTRARHCLWILGSERTLIS 842
C GS GF+S + +N A+TRA+ + ++G L S
Sbjct: 1164 TCMPQGSAPGSASTTSIGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVALCS 1218
Score = 68 (29.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 242 KGQWDEKFGPSFSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLT 301
K QW + P ++ E+ V A+ L + L+ GP GTGKT T++ +
Sbjct: 795 KKQWADSCEPKLNAKQREA-VNAITTAL-----SIKLPPILLIGPFGTGKTYTLAQAIKQ 848
Query: 302 LL-RIKCRTLACTPTNVA 318
LL + + + L CT +N A
Sbjct: 849 LLTQPEAKILICTHSNSA 866
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 166 (63.5 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 83/319 (26%), Positives = 144/319 (45%)
Query: 537 CLSVLRNLWNSLDELN-LPCTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHS-VEIK-PL 591
C +R ++ L+E S L + K A + T + ++ K H VE+
Sbjct: 996 CYRHIRKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKY 1055
Query: 592 NFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AGFG 643
+ ++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1056 DNILMEEAAQILEIETFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNME 1115
Query: 644 RSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
+SLF R L L+ Q R S+ NL +R + L N+ + ++ T
Sbjct: 1116 QSLFTRFVRLGVPTVDLDAQGRARASLC---NLYNWRYKQL--GNLPHVQLQPEFRTPNP 1170
Query: 704 FGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
T+ F IN+ +G E Y +N+ E + + +Y +G + I ++
Sbjct: 1171 GFTFDFQLINVEDFNGVGESEPNPYFY-QNLAEAEYSVALY--MYMRLLGYPAE-RISIL 1226
Query: 757 SPYTAQVVAIRKKIGFEYENKDGF--TVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
+ Y Q IR I + F KV ++D FQG + D II+S VR ++G +
Sbjct: 1227 TTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTK---AVGHL 1283
Query: 815 SKPQRVNVALTRARHCLWI 833
+R+ VA++RAR L+I
Sbjct: 1284 RDVRRLVVAMSRARLGLYI 1302
Score = 95 (38.5 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 39/180 (21%), Positives = 75/180 (41%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ L + RTL T +N A+ +L ++
Sbjct: 806 IEAIRAGMQPGLTMVVGPPGTGKTNVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKI 865
Query: 327 LKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGFEEI-YLNYRIKKLRECFAPLS 385
+ L D R + LG ++ L+ F +NY + + E ++
Sbjct: 866 MAL-----DIDERH---LLRLGH-----GEEELETEKDFSRYGRVNYVLSRRLELLQEVA 912
Query: 386 GWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKY 445
+ D+ C + H Y+ ++ R + +++ + K R+ PF KY
Sbjct: 913 RLQESLDVPGDVSYTCETAGHFYLYQIMSRWEEYMSKVKPKPGREVPTEDVATHFPFHKY 972
Score = 38 (18.4 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 104 TNQYGIEVDYWRNTISNSGKEPYKT 128
+NQY ++ N+I + ++PY+T
Sbjct: 631 SNQYQQDMT---NSIQSGAEDPYET 652
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 177 (67.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 69/252 (27%), Positives = 116/252 (46%)
Query: 584 HSVEI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
H + + K +F ++DEA+Q+ + PL + VL+GD QLP +V++ + + G
Sbjct: 766 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 823
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGA-----------NVK- 690
SLF+RL ++ L +QYRM+ I N Y ++ G+ N+K
Sbjct: 824 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKM 883
Query: 691 --------SKSYEKQYLTGTEFGTYSFINI--IGGREDFIYHSCRNIVEVSAVIKILQKL 740
SK++ K+ L + F+N + E N+ E V +
Sbjct: 884 LKLEFADASKTWLKEVLEPDK--PVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLF 941
Query: 741 YKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIII 800
KA G + IG++SPY Q+ I + EN+ V+V +ID +QG ++ III+
Sbjct: 942 IKA--GCRPS-DIGIISPYRHQLKVITDLMARLKENR----VEVNTIDKYQGRDKSIIIV 994
Query: 801 STVRCNTGGSIG 812
S VR + ++G
Sbjct: 995 SFVRNSNDENLG 1006
Score = 65 (27.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 26/76 (34%), Positives = 35/76 (46%)
Query: 256 TLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPT 315
+LN+ Q AM L D LI G PGTGKT T+ L+ L L + T
Sbjct: 643 SLNKPQKQAMKQVLLSRD------YTLIVGMPGTGKTTTICALVRILSACGFSVLLTSFT 696
Query: 316 NVAITELASRVLKLVK 331
+ A+ + +LKL K
Sbjct: 697 HTAVDNI---LLKLAK 709
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 119 (46.9 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
+ ++ ++DEA Q+ + T+ L + VL+GD QLP +V SK + + G +LF+
Sbjct: 763 RQFDYCIVDEATQVLQP--TVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQ 820
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN-VKSKSYEKQYL 699
RL S + +L++QYRM+ +I+ N Y + ++ V +E + L
Sbjct: 821 RLDS-EKATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELL 871
Score = 106 (42.4 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N E V+ +L+ L K+ + + IGV++PY AQV + KK+ + + ++
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASR---IGVIAPYRAQV-ELFKKLASKLDTD----LECN 995
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIG---------FISKPQRVNVALTRARHCLWILGS 836
++D FQG ++++II S + TGG + +R+ VA+TRA++ L +LG
Sbjct: 996 TVDQFQGRDKNLIIYSCSK--TGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGD 1053
Query: 837 ERTL 840
+ L
Sbjct: 1054 IKCL 1057
Score = 68 (29.0 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTP-TNVAITELASRVL 327
LI G PGTGKT+T+ + L+ LL + +++ T T+ A+ L R+L
Sbjct: 656 LIKGLPGTGKTQTL-VALVRLLHLLGKSVLITAQTHSAVDNLIMRLL 701
Score = 52 (23.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 470 KSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSHSVDEGISW 519
K +I +++ QEM+A SL +LL+ N++ E+E +D +S+
Sbjct: 204 KKHI-QSALQEMLASSSL----AHLLYASNLIQVEMEDHLMKFIDPIVSF 248
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 124 (48.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFE 648
K +F ++DEA+Q+ + PL + VL+GD QLP +V ++ + G SLF+
Sbjct: 11 KTFDFCIVDEASQISQPICLGPLFFS--RRFVLVGDHQQLPPLVLNREARALGMSESLFK 68
Query: 649 RLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
RL ++ L +QYRM+ I N Y ++ G++
Sbjct: 69 RLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 108
Score = 96 (38.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
NI E V+ + KA G +IG+++PY Q+ I + + G V+V
Sbjct: 170 NITEAKLVVYLTSIFVKA--GCNP-CNIGIIAPYRQQLKVINDLLS---HSSVGM-VEVN 222
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSI 811
++D +QG ++ II++S VR N G++
Sbjct: 223 TVDKYQGRDKSIILVSFVRSNRDGTV 248
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 176 (67.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 71/266 (26%), Positives = 115/266 (43%)
Query: 621 LIGDECQLPAMVESKISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYR 680
LI +C + + E G SLF+RL + L +QYRM+ I N Y
Sbjct: 780 LIHHQCFKGCVKSVSLVRELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYE 839
Query: 681 -----------NQILDGANVKSKSYEKQYLTGTEF----------GTYSFINI--IGGRE 717
N ++ ++K+ E ++ E F+N I E
Sbjct: 840 GRLECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALE 899
Query: 718 DFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENK 777
N +E V + + KA G + IG+++PY Q+ K I + +
Sbjct: 900 TEEKGGISNWIEAKLVFCLTKLFLKA--GCRPS-DIGIIAPYRQQL----KVISNYFNSL 952
Query: 778 DGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILGS 836
V+V ++D +QG ++ +II+S VR N G +G + K +R+NVALTRA+H L +LG
Sbjct: 953 SASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGC 1012
Query: 837 ERTLISSESIWGALVCDAKARQCFFN 862
TL S L+C K++ ++
Sbjct: 1013 VPTL-SRFLCLEQLICHLKSKNHIYD 1037
Score = 60 (26.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 282 LIWGPPGTGKTKTVSMLLLTL 302
LI G PGTGKT T+ L+ TL
Sbjct: 646 LIVGMPGTGKTTTICTLVSTL 666
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 198 (74.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 143/576 (24%), Positives = 240/576 (41%)
Query: 277 RSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYKR 336
R + LI GPPGTGKT ++ + + + IT + +L ++ Y+
Sbjct: 878 RDNLTLIVGPPGTGKTDIAVQIISNIYHS-----SPNERTLIITHSNQALNQLFEKIYRL 932
Query: 337 DSRSNTPI-CPLGDILLFGNKDRLK--VNPGFEEIYLNYRIKKLREC--FAPLSGWRHCF 391
D + G L K G + +L+ R+KKL + A
Sbjct: 933 DINERYLLRLGHGQKQLSSTNSTQKDFTKTGRIDFWLDLRLKKLDQVDKLAKSISVTDDV 992
Query: 392 SSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKPFLKYVRERFK 451
S D S YHI K + D ++ Q ++ K+ + K E PF K+ E
Sbjct: 993 SYTCDTALHFFS-YHILSRFEKFQYDLSLLQDDDDGDEKKIKFIK-ENYPFKKFFIEN-- 1048
Query: 452 CAVVSLRNCIFIFCTHLPKSYISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKLFSH 511
++ L+N +F T + + +N Q ++ +K L N + + + KELE+
Sbjct: 1049 -SI--LKNDK-LFDTTTTTTSV-DNHHQSLLNIKKNLIELWNYIKE---IFKELEEC--- 1097
Query: 512 SVDEGISWAFVRKRYLLQLHQRRSECLSVLRNLWNSLDELNLPCTTSKLVLEDFCFKRAS 571
V E + R YLL L Q + ++ + L L L++E+ + S
Sbjct: 1098 KVFELLKSPNDRYNYLL-LKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESA--QIS 1154
Query: 572 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAM 631
S +L+S EI + +D + + I G+ +LIGD QLP +
Sbjct: 1155 DIESFIPLQLQLNSNEIGDA-IIGVDGDDNGNGNGNNIS---RGLKRVILIGDHNQLPPI 1210
Query: 632 VESK-ISDEAGFGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVK 690
V+++ ++ + F +SLF RL L L+ Q R PSIS + + Y+ + D VK
Sbjct: 1211 VQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISELFSWK-YKG-LQDLPLVK 1268
Query: 691 SKSYEKQYLTGTEFGTYSFINI-------IGGREDFIYHSCRNIVEVSAVIKILQKLYKA 743
+ K G + Y IN+ +G E Y +N+ E ++ + Q Y
Sbjct: 1269 EQLQFKLANPGLAYD-YQLINVDESDGYGVGESEPTPYFY-QNLGEAEYIVAMFQ--YLI 1324
Query: 744 WVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKD------GFTVKVKSIDGFQGGEEDI 797
+G + I V++ Y Q +R + +D G +K+ +ID +QG + DI
Sbjct: 1325 AIGYPSE-KITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLPLKITTIDKYQGQQNDI 1383
Query: 798 IIISTVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
I++S VR G I +R+ VA++RAR L+I
Sbjct: 1384 ILLSLVRTK---QYGHIRDVRRLIVAMSRARLGLYI 1416
Score = 40 (19.1 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 164 DDEDENKKENRYKVKARN 181
+ E+ N N +K+K N
Sbjct: 807 EQENNNNNNNNFKIKFNN 824
Score = 39 (18.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 90 YAQVIAFEELKPYGTNQYGIEVDYWRNTISNSGKEPYKTLPGDILVLADFKPEKVSDLRR 149
Y + + LK Y T + I V RN N+ K T+ + D+ P+ S +
Sbjct: 699 YQEDLESSSLKLYDT--FNIVVR--RNPKENNFKAVLDTITS-LFNCKDYLPDWFSSIF- 752
Query: 150 VGRTWTFVSVTTVPDDEDENKKENRY 175
+G + + + ++E E KKEN +
Sbjct: 753 LG--YPSSNNNSNNNNEGEEKKENEF 776
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 165 DEDENKKENRYKVKARNN 182
D +EN +NR K K NN
Sbjct: 13 DNEEND-DNRKKQKLDNN 29
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 157 VSVTTVPDDEDENKKENRYKVKARNNMQVHDKTKKSF 193
+ V T ++ D N N +K + N++ + K F
Sbjct: 829 ILVDTYNNNNDNNNNNNNIIIK-KENLEEIKRNKIEF 864
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 169 (64.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 77/272 (28%), Positives = 135/272 (49%)
Query: 594 LVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGFGRSLFERLTSL 653
+++DEA+ + E +P+ LA N VL+GD QL +V S+ + + G G S E+L
Sbjct: 823 VIVDEASMVLEP-LLLPV-LATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQ- 879
Query: 654 NHSKHLLNI--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEK--QYLTGTEFGTYS 708
+H ++++ QYRM+ IS+ + FY N+++ G +V S ++ Y+ + G+
Sbjct: 880 SHPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDH 939
Query: 709 FINIIGGREDFIYHSCRNIVEVSAVIKILQ----------KLYKAWVGSK--QKVSIGVV 756
+ G D I SC + S + +Q +A + S+ Q+ + V
Sbjct: 940 IRKALSG--D-IKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGV 996
Query: 757 SPYTAQVV-AIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFIS 815
P+ V+ A R+++ + ++V +ID +QG E+ +II S N +
Sbjct: 997 KPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELL 1056
Query: 816 KPQR-VNVALTRARHCLWILGSERTLISSESI 846
K +R VNVALTRAR L ++G + S+E+I
Sbjct: 1057 KDERRVNVALTRARQKLVVVGCKN---SAETI 1085
Score = 65 (27.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLV 330
++ G PG+GKT +S+L+ L+ + L T+ A+ + +++ K V
Sbjct: 705 MVEGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEV 753
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 321 ELASRVLKLVKESYKRDSRSNTPICPLGDILLFGNKDRLKVNPGF---EEIYLNYRIKKL 377
E+++ ++ S K SNTP GD+ L NK + + GF +E+ + +I K+
Sbjct: 551 EMSNSQKIIISFSRKFLKSSNTPTFRPGDVCLLSNKKHIAI--GFALIDEVSDDQQIVKI 608
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 159 (61.0 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 85/322 (26%), Positives = 145/322 (45%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 997 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 1054
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1055 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1114
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1115 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLPEFSTA 1169
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1170 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1226
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I N G KV ++D FQG + D I++S VR ++
Sbjct: 1227 --LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AV 1281
Query: 812 GFISKPQRVNVALTRARHCLWI 833
G + +R+ VA++RAR L+I
Sbjct: 1282 GHLRDVRRLVVAMSRARLGLYI 1303
Score = 84 (34.6 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ + + RTL T +N A+ +L ++
Sbjct: 807 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKI 866
Query: 327 LKL 329
+ L
Sbjct: 867 MAL 869
Score = 41 (19.5 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++ E +R+ +I KPYGT
Sbjct: 546 RDHIKDEWEGLRKHDVCFLITVRPTKPYGT 575
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 454 VVSLRNCIFIFCTHLPKSY-ISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKL-FSH 511
+ SL+ F H P+ Y + ++ E+ A SL+ FG L N + + L
Sbjct: 334 ITSLQRAAF---AHFPELYDFALSNVAEVDARDSLVKFFGPL--SSNTLHQVASYLCLLP 388
Query: 512 SVDEGISWAFVRKRYLLQL----HQRRSECLSVLRNL 544
++ + F K +LL+L H+RR + L +
Sbjct: 389 TLPKNEDTTF-DKEFLLELLVSRHERRISQIQQLNQM 424
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 154 (59.3 bits), Expect = 7.4e-09, Sum P(4) = 7.4e-09
Identities = 84/322 (26%), Positives = 145/322 (45%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 996 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 1053
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1054 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1113
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1114 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLPEFSTA 1168
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1169 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1225
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I + G KV ++D FQG + D I++S VR ++
Sbjct: 1226 --LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AV 1280
Query: 812 GFISKPQRVNVALTRARHCLWI 833
G + +R+ VA++RAR L+I
Sbjct: 1281 GHLRDVRRLVVAMSRARLGLYI 1302
Score = 102 (41.0 bits), Expect = 7.4e-09, Sum P(4) = 7.4e-09
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI-KCRTLACTPTNVAITELASRVL 327
+ + G + G+ ++ GPPGTGKT ++ + + RTL TP+N A+ +L +++
Sbjct: 807 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHFPEQRTLIVTPSNPALNQLFEKIM 866
Query: 328 KL-VKESYK-RDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA-PL 384
L + E + R + D +G + + I L +K+L++ P
Sbjct: 867 ALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLAR----RIELLEEVKRLQKSLGVPG 922
Query: 385 SGWRHCFSSMIDLLEDCVSQYHIYVEKLKER 415
C ++ L +S++ Y+ K+K +
Sbjct: 923 DASYTCETAGYFFLYQVMSRWEEYISKVKNK 953
Score = 40 (19.1 bits), Expect = 7.4e-09, Sum P(4) = 7.4e-09
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++ E +R+ ++ KPYGT
Sbjct: 546 RDHIKDEWEGLRKHDVCFLVTVRPTKPYGT 575
Score = 37 (18.1 bits), Expect = 7.4e-09, Sum P(4) = 7.4e-09
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 105 NQYGIEVDYWRNTISNSGKEPYKT 128
NQY ++ NTI N ++ Y+T
Sbjct: 632 NQYQQDMT---NTIQNGAEDVYET 652
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 475 ENSFQEMVALKSLLDSFGNLL 495
E SFQE L L+ F ++L
Sbjct: 213 EQSFQERRFLSQLIQKFISVL 233
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 163 (62.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 81/276 (29%), Positives = 134/276 (48%)
Query: 592 NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQ-LPAMVESKISDEAGFGRSLFERL 650
++ ++DEA+Q+ S PL+ A V D+ Q L + ++ E RSLF L
Sbjct: 1096 DYCIVDEASQITLPVSLGPLRFAKKFVMVGDHDQLQPLVTHPDKRVKQE--LSRSLFSLL 1153
Query: 651 TSLN-HSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEK----QYLT---GT 702
+ S L QYRM+ I N Y N++ G+ +++ K + L G
Sbjct: 1154 AKEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFIGE 1213
Query: 703 EFGTYS-FINIIGGRED---FIYHSCRNIVEVSA---VIK-----ILQKLYKAWV-GSKQ 749
+ S +I+ I ++ F+ + VE + VI ++Q++ A V G +
Sbjct: 1214 DVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGVK 1273
Query: 750 KVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGG 809
+ IGV+S Y AQ+ ++K + KD +++ + D +QG +++ IIIS VR N
Sbjct: 1274 EDEIGVMSFYRAQLSVLKKNLN---NLKD---LEILTADQYQGRDKECIIISLVRSNERK 1327
Query: 810 SIGFISKP-QRVNVALTRARHCLWILGSERTLISSE 844
G + K +R+NVA TRA+ L ILGS TL ++E
Sbjct: 1328 FAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
Score = 68 (29.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 254 SSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRIKCRTLACT 313
+ T N Q+ A+ D LI G PGTGKT ++ L+ L+ + L +
Sbjct: 964 AETFNPDQIAALKKVFSADD------YSLIVGMPGTGKTTVIAQLIKVLVAQRKSVLLTS 1017
Query: 314 PTNVAITELASRVLKL 329
TN A+ + +LKL
Sbjct: 1018 YTNSAVDNI---LLKL 1030
Score = 44 (20.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 34/144 (23%), Positives = 58/144 (40%)
Query: 387 WRHCFSSMIDLL-----EDCVSQYHIYVEKLKEREDCNVNQSEEKECRKETEGSKGERKP 441
+ H +S+ LL + + Y + K K + CN+ SE + K
Sbjct: 630 YHHAQASLYSLLFKDRYDKNIDSYLLVYTKEKVTKKCNIRISELRSLVNLRNRVSNYIKD 689
Query: 442 FLKY--VRERFKCAVVSLRN-CIFIFCTHLPKSYISENSFQEMVALKSLL-DSFGN---- 493
LK + + C +R+ C+ + HL ++ E S E +++ D F N
Sbjct: 690 NLKLPPLVKNSNCDRCEIRSACMTL--NHLTENGTKEESGIEEELYEAITRDIFENDSYR 747
Query: 494 LLFQ--DNVVSKELEKLFSHSVDE 515
FQ D ++SKE E + +V E
Sbjct: 748 KYFQHWDELISKE-EDVMGRAVKE 770
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 46 KDQVEKIPESFQSVKQYFGSFVFP 69
KD + + +S + +QY +++ P
Sbjct: 1051 KDYIPEFKDSITTYEQYVNTYMRP 1074
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 124 (48.7 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 584 HSVEIK-PLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
H +K ++ +IDEA+ L + S P+ VL+GD QLP +V +K + + G
Sbjct: 1443 HQCLLKMQFDYCIIDEASILSQPISMGPILKC--KSFVLVGDHHQLPPIVNNKEAGKLGL 1500
Query: 643 GRSLFERLTSLNHSKHLLNI--QYRMHPSISLFPNLQFYRNQILDG-ANVKSKSYEKQY 698
SLF++L S +H + N+ QYRM SI N Y N+++ G ++ + S + Y
Sbjct: 1501 DISLFKQL-STSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNY 1558
Score = 108 (43.1 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 784 VKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILGSERTL 840
+ +ID FQG ++D IIIS VR N IG + K +R+NVA TRA+ L +GS+ +L
Sbjct: 1753 ILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSL 1810
Score = 63 (27.2 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKE 332
LI G PGTGKT V L+ L R+ + L + T+ ++ L +LK K+
Sbjct: 1341 LIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHL---LLKFNKQ 1388
Score = 39 (18.8 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 153 TWTFVSVTTVPDDEDENKKENRYK 176
T T + TT N NRY+
Sbjct: 577 TTTTTTTTTTTSTSTNNNNNNRYE 600
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 157 (60.3 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 82/320 (25%), Positives = 143/320 (44%)
Query: 537 CLSVLRNLWNSLDELN-LPCTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHS-VEIK-PL 591
C L+ ++ L+E S L + K A + T + ++ K H VE+
Sbjct: 1006 CFRHLKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKY 1065
Query: 592 NFLVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AGFG 643
+ ++++E+AQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1066 DNILMEESAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNME 1125
Query: 644 RSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGTE 703
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1126 QSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLMPEFRTANA 1180
Query: 704 FGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVV 756
Y F IN+ +G E Y +N+ E V+ + +Y +G I ++
Sbjct: 1181 GFLYDFQLINVEDFNGVGESEPNPYFY-QNLGEAEYVVAVF--MYMCLLGYPAD-RISIL 1236
Query: 757 SPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFI 814
+ Y Q IR I N G KV ++D FQG + D I++S VR ++G +
Sbjct: 1237 TTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTK---AVGHL 1293
Query: 815 SKP-QRVNVALTRARHCLWI 833
+ +R+ VA++RAR L+I
Sbjct: 1294 RRDVRRLVVAMSRARLGLYI 1313
Score = 86 (35.3 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ L + RTL T +N A+ +L ++
Sbjct: 816 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKI 875
Query: 327 LKL 329
+ L
Sbjct: 876 MAL 878
Score = 37 (18.1 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 105 NQYGIEVDYWRNTISNSGKEPYKT 128
NQY ++ NTI N ++ Y+T
Sbjct: 642 NQYQQDMT---NTIQNGAEDVYET 662
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 159 (61.0 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 85/322 (26%), Positives = 145/322 (45%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 997 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 1054
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1055 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1114
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1115 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLPEFSTA 1169
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1170 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1226
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I N G KV ++D FQG + D I++S VR ++
Sbjct: 1227 --LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AV 1281
Query: 812 GFISKPQRVNVALTRARHCLWI 833
G + +R+ VA++RAR L+I
Sbjct: 1282 GHLRDVRRLVVAMSRARLGLYI 1303
Score = 88 (36.0 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 33/152 (21%), Positives = 67/152 (44%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ + + RTL T +N A+ +L ++
Sbjct: 807 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKI 866
Query: 327 LKL-VKESYK-RDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA-P 383
+ L + E + R + D +G + + I L +K+L++ P
Sbjct: 867 MALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLAR----RIELLEEVKRLQKSLGVP 922
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKER 415
C ++ L +S++ Y+ K+K +
Sbjct: 923 GDASYTCETAGYFFLYQVMSRWEEYISKVKNK 954
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++ E +R+ +I KPYGT
Sbjct: 546 RDHIKDEWEGLRKHDVCFLITVRPTKPYGT 575
Score = 37 (18.1 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 105 NQYGIEVDYWRNTISNSGKEPYKT 128
NQY ++ NTI N ++ Y+T
Sbjct: 632 NQYQQDMT---NTIQNGAEDVYET 652
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 159 (61.0 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 85/322 (26%), Positives = 145/322 (45%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 1001 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 1058
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1059 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1118
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1119 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLPEFSTA 1173
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1174 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1230
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I N G KV ++D FQG + D I++S VR ++
Sbjct: 1231 --LTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AV 1285
Query: 812 GFISKPQRVNVALTRARHCLWI 833
G + +R+ VA++RAR L+I
Sbjct: 1286 GHLRDVRRLVVAMSRARLGLYI 1307
Score = 84 (34.6 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ + + RTL T +N A+ +L ++
Sbjct: 807 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKI 866
Query: 327 LKL 329
+ L
Sbjct: 867 MAL 869
Score = 41 (19.5 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++ E +R+ +I KPYGT
Sbjct: 546 RDHIKDEWEGLRKHDVCFLITVRPTKPYGT 575
Score = 40 (19.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 454 VVSLRNCIFIFCTHLPKSY-ISENSFQEMVALKSLLDSFGNLLFQDNVVSKELEKL-FSH 511
+ SL+ F H P+ Y + ++ E+ A SL+ FG L N + + L
Sbjct: 334 ITSLQRAAF---AHFPELYDFALSNVAEVDARDSLVKFFGPL--SSNTLHQVASYLCLLP 388
Query: 512 SVDEGISWAFVRKRYLLQL----HQRRSECLSVLRNL 544
++ + F K +LL+L H+RR + L +
Sbjct: 389 TLPKNEDTTF-DKEFLLELLVSRHERRISQIQQLNQM 424
Score = 39 (18.8 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 1597 KMEACQVQVGTSKDV-PSKRPASLPEDTDAQNMNDNTLVMNLDQLCKVFEALKMV 1650
+MEA + V ++ PS ASL ++T A + ++ + C + A + V
Sbjct: 1407 EMEAEEETVSAQGNLTPSPADASLSQETPAAQPDCSSQTEDTSAPCDIATAAEPV 1461
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 142 (55.0 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 74/262 (28%), Positives = 116/262 (44%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP--AMVESKISDEAGFGRSL 646
+ + +V+DE + + + L V+ GD QLP AM ++ + G +
Sbjct: 333 RTFDLVVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRK-WLGEDM 389
Query: 647 FER---LTSLNHSK-H----LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
F + S+N S+ H +L Q RMH IS F N Y+N++ D +V + Q
Sbjct: 390 FYHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQL 449
Query: 699 LTGTEFGTYSF-INIIGG--REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+ F + +G +D S NI+ S ++ + L G + SIG+
Sbjct: 450 QPFANEASVLFDTSQMGAFSLKDAASGSRFNIM--SGLVAMQMMLIGLLDGVQ---SIGI 504
Query: 756 VSPYTAQV----VAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---NT 807
V+PY AQ IR+ + +Y+N V ++ FQG E D++I TV
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQN---IPVLAATVHKFQGSERDMMIFDTVDSYPQER 561
Query: 808 GGSIGFISKPQR-VNVALTRAR 828
G + F K R VNVA+TRAR
Sbjct: 562 PGVLFFDHKNHRLVNVAVTRAR 583
Score = 82 (33.9 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 283 IWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYK 335
+WGPPGTGK+ +S ++ + L +N A+ L S V K +++ K
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKK 222
Score = 41 (19.5 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 432 TEGSKGERKPFLKYVRERFKCAVVSLR 458
T GS GE + +L+ R+ + ++S +
Sbjct: 254 TNGSWGEERLYLEETRQELREKILSYK 280
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 142 (55.0 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 74/262 (28%), Positives = 116/262 (44%)
Query: 589 KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLP--AMVESKISDEAGFGRSL 646
+ + +V+DE + + + L V+ GD QLP AM ++ + G +
Sbjct: 333 RTFDLVVVDEVSMAFVPQIALAASLG--KRIVVCGDFLQLPPIAMANHELVRK-WLGEDM 389
Query: 647 FER---LTSLNHSK-H----LLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQY 698
F + S+N S+ H +L Q RMH IS F N Y+N++ D +V + Q
Sbjct: 390 FYHAGIVESVNKSEAHPNLFMLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQL 449
Query: 699 LTGTEFGTYSF-INIIGG--REDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGV 755
+ F + +G +D S NI+ S ++ + L G + SIG+
Sbjct: 450 QPFANEASVLFDTSQMGAFSLKDAASGSRFNIM--SGLVAMQMMLIGLLDGVQ---SIGI 504
Query: 756 VSPYTAQV----VAIRKKIG-FEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRC---NT 807
V+PY AQ IR+ + +Y+N V ++ FQG E D++I TV
Sbjct: 505 VTPYRAQSRFLSTCIREMLQRTKYQN---IPVLAATVHKFQGSERDMMIFDTVDSYPQER 561
Query: 808 GGSIGFISKPQR-VNVALTRAR 828
G + F K R VNVA+TRAR
Sbjct: 562 PGVLFFDHKNHRLVNVAVTRAR 583
Score = 82 (33.9 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 283 IWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVKESYK 335
+WGPPGTGK+ +S ++ + L +N A+ L S V K +++ K
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKKK 222
Score = 41 (19.5 bits), Expect = 8.4e-08, Sum P(3) = 8.4e-08
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 432 TEGSKGERKPFLKYVRERFKCAVVSLR 458
T GS GE + +L+ R+ + ++S +
Sbjct: 254 TNGSWGEERLYLEETRQELREKILSYK 280
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 155 (59.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 65/253 (25%), Positives = 111/253 (43%)
Query: 584 HSVEI-KPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDEAGF 642
H + + K +F ++DEA+Q+ + PL + VL+GD QLP +V++ + + G
Sbjct: 717 HPIFVQKQFDFCIVDEASQISQPICLGPLFCS--KRFVLVGDHQQLPPLVQNSEARDLGM 774
Query: 643 GRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTGT 702
SLF+RL ++ L +QYRM+ I N Y ++ G+ S +
Sbjct: 775 SESLFKRLEQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNA--------- 825
Query: 703 EFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQ 762
T + N+ + +F S + EV K + L G + IG++SPY Q
Sbjct: 826 ---TANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKAGCRPS-DIGIISPYRHQ 881
Query: 763 VVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRVNV 822
+ I + EN+ + G + II+ N + +R+NV
Sbjct: 882 LKVITDLMARLKENRVEVNT-IDKYQGRD--KSIIIVSFVRNSNDENLGALLKDWRRLNV 938
Query: 823 ALTRARHCLWILG 835
A+TRA+H L ++G
Sbjct: 939 AITRAKHKLIMVG 951
Score = 64 (27.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 282 LIWGPPGTGKTKTVSMLLLTLLRIKCRTLACTPTNVAITELASRVLKLVK 331
LI G PGTGKT T+ L+ L L + T+ A+ + +LKL K
Sbjct: 614 LIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNI---LLKLAK 660
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 181 (68.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 72/237 (30%), Positives = 114/237 (48%)
Query: 576 TASSSYKLHSVEIKPLNF--LVIDEAAQLKESESTIPLQLAGIN-HAVLIGDECQLPAMV 632
T ++S L ++++P F +++DEAAQ E E+ +PL LA + VL GD QL V
Sbjct: 776 TLNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFV 835
Query: 633 ESKISDEAGFGRSLFERLTSLNHSKH----LLNIQYRMHPSISLFPNLQFYRNQILDGAN 688
S+ + E SL +RL ++ LL YR H +I + + FY +++ A+
Sbjct: 836 YSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM--AS 893
Query: 689 VKSKSYEKQY-LTGTEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGS 747
K ++++ Y LT F T ++ Y++ V V ++ +K AW G
Sbjct: 894 GKQPAHKEFYPLT---FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAW-GK 949
Query: 748 KQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR 804
SIGVV+PY QV IR E K V V+ + QG + ++ +STVR
Sbjct: 950 LDDGSIGVVTPYADQVFRIRA----ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVR 1002
Score = 51 (23.0 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 812 GFISKPQRVNVALTRARHCLWILGSERTLIS 842
GF+S + +N A+TRA+ + ++G L S
Sbjct: 1031 GFLSNYKLLNTAITRAQSLVAVVGDPIALCS 1061
Score = 44 (20.5 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 1537 IENHNCLN--VHEISQAFKKIGNPLVIASLGKNCSQF 1571
+ N+ LN + +G+P+ + S+G+ C +F
Sbjct: 1033 LSNYKLLNTAITRAQSLVAVVGDPIALCSIGR-CRKF 1068
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1665 QVGTSKDVPSKRPASLPEDTDAQNK 1689
++ +S P AS P+D+ AQ K
Sbjct: 1760 RISSSSVQPCSEEASTPQDSLAQRK 1784
Score = 39 (18.8 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1602 QVQVGTSKDVPSKRPASLPEDTDAQ 1626
Q ++ +S P AS P+D+ AQ
Sbjct: 1758 QRRISSSSVQPCSEEASTPQDSLAQ 1782
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 153 (58.9 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 84/322 (26%), Positives = 145/322 (45%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 979 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 1036
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 1037 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1096
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1097 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLLEFSTA 1151
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1152 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1208
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I + G KV ++D FQG + D I++S VR ++
Sbjct: 1209 --LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AV 1263
Query: 812 GFISKPQRVNVALTRARHCLWI 833
G + +R+ VA++RAR L+I
Sbjct: 1264 GHLRDVRRLVVAMSRARLGLYI 1285
Score = 84 (34.6 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ ++ GPPGTGKT ++ + + RTL T +N A+ +L ++
Sbjct: 790 IEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKI 849
Query: 327 LKL 329
+ L
Sbjct: 850 MAL 852
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 75 RMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
R ++ E +R+ +I KPYGT
Sbjct: 529 RDHIKDEWEGLRKHDVCFLITVRPTKPYGT 558
Score = 37 (18.1 bits), Expect = 4.1e-07, Sum P(4) = 4.1e-07
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 105 NQYGIEVDYWRNTISNSGKEPYKT 128
NQY ++ NTI N ++ Y+T
Sbjct: 615 NQYQQDMT---NTIQNGAEDVYET 635
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 150 (57.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 66/285 (23%), Positives = 129/285 (45%)
Query: 572 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL--- 628
++ S+ +S +K+ +E + + ++IDEA Q + LQ A A+++GD QL
Sbjct: 505 IWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA--KAALVVGDSKQLRHF 562
Query: 629 ---PAMVESKISDEAGFG-----------RSLFERLT-SLNHSKHL--LNIQYRMHPSIS 671
+++I + G S+ + ++ SL + LN +R P +
Sbjct: 563 SFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELI 622
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVS 731
F N QFY+ + + Q+ T G +++ G R+ N +E
Sbjct: 623 QFSNQQFYQGML----KIM------QHRPCTSSGHLHRVHVTGSRDS----KGINAIEAE 668
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFTVKVKSIDG 789
A+I+ L +L + SIGV+S + Q + ++I F + + +++ + G
Sbjct: 669 ALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFG 728
Query: 790 FQGGEEDIIIIS-TVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
FQG E DI+++S ++ N + ++++ NVA+TRA+ W+
Sbjct: 729 FQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQWL 773
Score = 63 (27.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 283 IWGPPGTGKTKTVSMLLLT-LLRIKCRTLACTPTNVAITELASRV 326
I GPPGTGK+ T++ + +LR K L T+VA+ +A ++
Sbjct: 278 ISGPPGTGKSYTIATVAAEQVLRGKS-VLIVAHTDVAVDVIADKL 321
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1757 MDLDQLCKYVDKYSTI 1772
++LD LC+Y ++Y I
Sbjct: 835 LELDILCRYGNQYLAI 850
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 150 (57.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 66/285 (23%), Positives = 129/285 (45%)
Query: 572 LFFSTASSSYKLHSVEIKPLNFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQL--- 628
++ S+ +S +K+ +E + + ++IDEA Q + LQ A A+++GD QL
Sbjct: 505 IWLSSLASLHKVLPMEQQMFDLVIIDEATQANIAACLPALQRA--KAALVVGDSKQLRHF 562
Query: 629 ---PAMVESKISDEAGFG-----------RSLFERLT-SLNHSKHL--LNIQYRMHPSIS 671
+++I + G S+ + ++ SL + LN +R P +
Sbjct: 563 SFLSRAKQTQIQTQLGLAPDCRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELI 622
Query: 672 LFPNLQFYRNQILDGANVKSKSYEKQYLTGTEFGTYSFINIIGGREDFIYHSCRNIVEVS 731
F N QFY+ + + Q+ T G +++ G R+ N +E
Sbjct: 623 QFSNQQFYQGML----KIM------QHRPCTSSGHLHRVHVTGSRDS----KGINAIEAE 668
Query: 732 AVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKI--GFEYENKDGFTVKVKSIDG 789
A+I+ L +L + SIGV+S + Q + ++I F + + +++ + G
Sbjct: 669 ALIQKLSQLIDEQENALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFG 728
Query: 790 FQGGEEDIIIIS-TVRCNTGGSIGFISKPQRVNVALTRARHCLWI 833
FQG E DI+++S ++ N + ++++ NVA+TRA+ W+
Sbjct: 729 FQGEERDIMLLSFSITANDSRAAVYLNREDMFNVAITRAKQMQWL 773
Score = 63 (27.2 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 283 IWGPPGTGKTKTVSMLLLT-LLRIKCRTLACTPTNVAITELASRV 326
I GPPGTGK+ T++ + +LR K L T+VA+ +A ++
Sbjct: 278 ISGPPGTGKSYTIATVAAEQVLRGKS-VLIVAHTDVAVDVIADKL 321
Score = 41 (19.5 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 1757 MDLDQLCKYVDKYSTI 1772
++LD LC+Y ++Y I
Sbjct: 835 LELDILCRYGNQYLAI 850
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 148 (57.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 69/263 (26%), Positives = 112/263 (42%)
Query: 587 EIKPL-NFLVIDEAAQLKESESTIPLQLAGINHAVLIGDECQLPAMVESKISDE---AGF 642
EIK L + IDEA+QL L +L+GD QLP E + E A
Sbjct: 310 EIKDLFDITFIDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYTEDALPAELKRAAV 369
Query: 643 GRSLFERLTSLNHSK-HLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
G L + S HL + +R I+ FY N + ++ + +
Sbjct: 370 GEPLTLAVKGRRWSSMHLTRV-HRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMEL 428
Query: 702 TEFGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTA 761
+ F+N I ++ + S N E ++++ L + VS+ V++ Y A
Sbjct: 429 PSHHPFVFVNYIS-QQTQVGKSFSNENEARYALQLVTALKRHAREQNTTVSVAVLNFYGA 487
Query: 762 QVVAIRKKIGFEYE-NKDGFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSIGFISKPQRV 820
Q + Y +DG V+V +IDG QG E D+ I+ R + F+ P R+
Sbjct: 488 QY-------SYVYSIAEDG--VRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRI 538
Query: 821 NVALTRARHCLWILGSERTLISS 843
NVAL+R++ ++G +R LI +
Sbjct: 539 NVALSRSKMATVVIG-QRHLIGN 560
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 91 (37.1 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 591 LNFLVIDEAAQLKESESTIP--LQLAGINHAVLIGDECQLPAMVESKISDEAG---FGRS 645
L++++IDEA+Q + +P L L+ + +++GD QL A + K+ EA +
Sbjct: 333 LDYVIIDEASQ----QDIVPGVLALSCAKNLIIVGDRKQL-AHIPEKLGLEAPAPWYDCE 387
Query: 646 LFERLTSL------NHSKHLLNIQYRMHPSISLFPNLQFYRNQIL 684
+ L S + LL YR HP I F N QFY NQ++
Sbjct: 388 TYSLLDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQLV 432
Score = 89 (36.4 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 242 KGQWDEKFGPS---FSSTLNESQVGAMLACLRRLDCGHRSGVELIWGPPGTGKTKTVSML 298
KGQ ++ P F LNESQ L+ ++ S + LI GPPGTGKT+T+ +
Sbjct: 12 KGQPVQQDSPGNFIFPFGLNESQ-------LKAVEQAFSSQISLIEGPPGTGKTQTILNI 64
Query: 299 LLTLLRIKCRTLACTPTNVA 318
+ +L ++ +T+A N A
Sbjct: 65 IANIL-LQGKTVAVVSNNNA 83
Score = 70 (29.7 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 30/140 (21%), Positives = 66/140 (47%)
Query: 694 YEKQYLTGTE-FGTYSFINIIGGREDFIYHSCRNIVEVSAVIKILQKLYKA-WVGSKQKV 751
Y+ Q + T+ G S ++ + + ++ N+ E+ +++ +L ++ W G +
Sbjct: 427 YDNQLVPMTQDAGEQSLTLLVTAKGNHTRNNS-NLRELDSLLAVLDGSGESIWEGEDGR- 484
Query: 752 SIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTV--RCNTGG 809
G ++P+ Q + ++ N ++ FQG E D I+ STV + +
Sbjct: 485 --GFIAPFKNQATLSGSCLPADFIND--------TVHKFQGRECDEIVFSTVLDKHKSPE 534
Query: 810 SIGFISKPQRVNVALTRARH 829
+ F+ + VNVA++RA++
Sbjct: 535 RLSFVDDARMVNVAVSRAKN 554
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 139 (54.0 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 77/305 (25%), Positives = 133/305 (43%)
Query: 537 CLSVLRNLWNSLDELNLP-CTTSKLVLEDFCF-KRASLFFSTAS-SSYKLHSVEIKPLNF 593
C ++ ++ L+E S L + K A + T + ++ K H + +K L F
Sbjct: 914 CFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDL-VK-LGF 971
Query: 594 ----LVIDEAAQLKESESTIPLQLAG-------INHAVLIGDECQLPAMVESKISDE-AG 641
++++EAAQ+ E E+ IPL L + ++IGD QLP ++++ + +
Sbjct: 972 KYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSN 1031
Query: 642 FGRSLFERLTSLNHSKHLLNIQYRMHPSISLFPNLQFYRNQILDGANVKSKSYEKQYLTG 701
+SLF R + L+ Q R S+ NL +R + L N+ ++ T
Sbjct: 1032 MEQSLFTRFVRVGVPTVDLDAQGRARASLC---NLYNWRYKNL--GNLPHVQLLPEFSTA 1086
Query: 702 TEFGTYSF--INI-----IGGREDFIYHSCRNIVEVSAVIKILQKLYKAWVG-SKQKVSI 753
Y F IN+ +G E Y +N+ E V+ + +Y +G K+SI
Sbjct: 1087 NAGLLYDFQLINVEDFQGVGESEPNPYFY-QNLGEAEYVVALF--MYMCLLGYPADKISI 1143
Query: 754 GVVSPYTAQVVAIRKKIGFEYENKD--GFTVKVKSIDGFQGGEEDIIIISTVRCNTGGSI 811
++ Y Q IR I + G KV ++D FQG + D I++S VR G +
Sbjct: 1144 --LTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHL 1201
Query: 812 GFISK 816
++ K
Sbjct: 1202 RYVRK 1206
Score = 80 (33.2 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 35/161 (21%), Positives = 70/161 (43%)
Query: 269 LRRLDCGHRSGVELIWGPPGTGKTKTVSMLLLTLLRI--KCRTLACTPTNVAITELASRV 326
+ + G + G+ + GPPGTGKT ++ + R + RT T +N A+ +L ++
Sbjct: 724 IEAIRAGMQPGLTMGVGPPGTGKTDVAVPIISNIYRNFPEQRTRIVTRSNHALNQLFEKI 783
Query: 327 LKL-VKESYK-RDSRSNTPICPLGDILLFGNKDRLKVNPGFEEIYLNYRIKKLRECFA-P 383
+ L + E + R + D +G + + I L +K+L++ P
Sbjct: 784 MALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLAR----RIELLEEVKRLQKSLGVP 839
Query: 384 LSGWRHCFSSMIDLLEDCVSQYHIYVEKLKEREDCNVNQSE 424
C ++ L +S++ Y+ K+K + + N +E
Sbjct: 840 GDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPNVTE 880
Score = 38 (18.4 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 73 ETRMQLRSGLEAMRRAPYAQVIAFEELKPYGT 104
E+ + LR L +R+ +I KPYGT
Sbjct: 462 ESNLILRI-LLGLRKHDVCFLITVRPTKPYGT 492
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 105 NQYGIEVDYWRNTISNSGKEPYKT 128
NQY ++ NTI N ++ Y+T
Sbjct: 549 NQYQQDMT---NTIQNGAEDVYET 569
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 46/137 (33%), Positives = 68/137 (49%)
Query: 753 IGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVKSIDGFQGGEEDIIIISTVR-CNT---- 807
I +++PY AQV I+ + E K+ V V ++ QG E +I+STVR C+T
Sbjct: 75 IAILTPYNAQVSEIKMTL----EKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQ 130
Query: 808 -----------GGSIGFISKPQRVNVALTRARHCLWILGSERTLISSESIWGALVCDAKA 856
G +GF++ +VNVA+TRA+ L ILG+ L E +W L+
Sbjct: 131 AYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCE-LWDRLLDHYYR 189
Query: 857 RQCFFN-ADEERNLAKA 872
+ C N A + R AKA
Sbjct: 190 KSCVVNPASDIRVKAKA 206
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 726 NIVEVSAVIKILQKLYKAWVGSKQKVSIGVVSPYTAQVVAIRKKIGFEYENKDGFTVKVK 785
N+ E ++ + KA G IG+++PY Q+ I + G V+V
Sbjct: 675 NVTEAKLIVFLTSIFVKA--GCSPS-DIGIIAPYRQQLKIINDLLA----RSIGM-VEVN 726
Query: 786 SIDGFQGGEEDIIIISTVRCNTGGSIGFISKP-QRVNVALTRARHCLWILG 835
++D +QG ++ I+++S VR N G++G + K +R+NVA+TRA+H L +LG
Sbjct: 727 TVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLG 777
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 282 LIWGPPGTGKTKTVSMLL 299
LI G PGTGKT T+ L+
Sbjct: 645 LIVGMPGTGKTTTICTLV 662
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 172 ENRYKVKARNNMQVHDKTKKSFFFIYLTNILPNKRI 207
+NRY V A N +Q + + I + L NK +
Sbjct: 44 DNRYLVLAVNTVQNKEGNCEKRLVITASQSLENKEL 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1825 1773 0.00092 125 3 11 22 0.37 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 171
No. of states in DFA: 635 (67 KB)
Total size of DFA: 776 KB (2328 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 156.15u 0.18s 156.33t Elapsed: 00:00:07
Total cpu time: 156.21u 0.18s 156.39t Elapsed: 00:00:07
Start: Fri May 10 13:06:49 2013 End: Fri May 10 13:06:56 2013
WARNINGS ISSUED: 1